# terms

id: PBO:0051077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 6-19","termid":"PBO:0051077"}


id: GO:0051927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of calcium ions via a voltage-gated calcium channel.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of calcium ion transport via voltage-gated calcium channel activity (obsolete GO:0051927)","synonyms":[{"name":"down regulation of calcium ion transport via voltage gated calcium channel","type":"exact"},{"name":"down-regulation of calcium ion transport via voltage gated calcium channel","type":"exact"},{"name":"downregulation of calcium ion transport via voltage gated calcium channel","type":"exact"},{"name":"inhibition of calcium ion transport via voltage gated calcium channel","type":"narrow"},{"name":"negative regulation of calcium ion transport via voltage-gated calcium channel activity","type":"exact"},{"name":"negative regulation of calcium transport via voltage gated calcium channel","type":"related"}],"termid":"GO:0051927"}


id: PBO:0057529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 646","termid":"PBO:0057529"}


id: PBO:0042640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 15 pseudogene","termid":"PBO:0042640"}


id: PBO:0078862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC6 pseudogene 10","termid":"PBO:0078862"}


id: MOD:00176
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(phosphoribosyl dephospho-coenzyme A)-L-serine.","definition_xrefs":["RESID:AA0167","Unimod:395#S","PubMed:10924139","PubMed:11052675","PubMed:179809","PubMed:180526","PubMed:368065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(phosphoribosyl dephospho-coenzyme A)-L-serine","synonyms":[{"name":"MOD_RES O-(phosphoribosyl dephospho-coenzyme A)serine","type":"exact"},{"name":"O-(phosphoribosyl dephospho-coenzyme A)-L-serine","type":"exact"},{"name":"O3-(phosphate-5-ribosyl-alpha-2-adenosine-5-diphosphate pantetheine)-L-serine","type":"exact"},{"name":"O3-(phosphoribosyl dephospho-coenzyme A)-L-serine","type":"exact"},{"name":"O3-2'-(5''-phosphoribosyl-3'-dephosphocoenzyme A)-L-serine","type":"exact"},{"name":"OPRibdPCoASer","type":"exact"},{"name":"PhosphoribosyldephosphoCoA","type":"related"},{"name":"phosphoribosyl dephospho-coenzyme A","type":"related"}],"termid":"MOD:00176"}


id: MONDO:0014416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Cushing syndrome due to macronodular adrenal hyperplasia in which the cause of the disease is a mutation in the ARMC5 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"Cushing syndrome due to macronodular adrenal hyperplasia","termid":"MONDO:0009049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTH-independent macronodular adrenal hyperplasia 2","secondary_identifiers":["MEDGEN:863240","DOID:0111624","OMIM:615954","GARD:16034","UMLS:C4014803"],"synonyms":[{"name":"ACTH-independent macronodular adrenal hyperplasia 2","type":"exact"},{"name":"ACTH-independent macronodular adrenal hyperplasia 2, autosomal dominant, somatic mutation","type":"exact"},{"name":"ACTH-independent macronodular adrenal hyperplasia type 2","type":"exact"},{"name":"AIMAH2","type":"related"},{"name":"ARMC5 Cushing syndrome due to macronodular adrenal hyperplasia","type":"exact"},{"name":"Cushing syndrome due to macronodular adrenal hyperplasia caused by mutation in ARMC5","type":"exact"},{"name":"primary macronodular adrenal hyperplasia","type":"related"}],"termid":"MONDO:0014416","xrefs":{"Monarch":{"xref_id":"0014416"}}}


id: PBO:0038993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylosuccinate synthase 2","termid":"PBO:0038993"}


id: MONDO:0009143
data:
  {"annotated_genes":["SJAG_03927"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85343],"is_not":false,"summary":null,"term":"MONDO:0009143"}]},"cv_name":"mondo","definition":"Any Meier-Gorlin syndrome in which the cause of the disease is a mutation in the ORC1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Meier-Gorlin syndrome","termid":"MONDO:0016817"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03927":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Meier-Gorlin syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:703508009","OMIM:224690","UMLS:C4552001","GARD:15162","DOID:0080512","ICD9:759.89","MEDGEN:1641240"],"synonyms":[{"name":"Ear, patella, short stature syndrome","type":"related"},{"name":"MGORS1","type":"related"},{"name":"Meier-GORLIN syndrome 1","type":"related"},{"name":"Meier-Gorlin syndrome","type":"related"},{"name":"Meier-Gorlin syndrome 1","type":"exact"},{"name":"Meier-Gorlin syndrome caused by mutation in ORC1","type":"exact"},{"name":"Meier-Gorlin syndrome type 1","type":"exact"},{"name":"ORC1 Meier-Gorlin syndrome","type":"exact"},{"name":"microtia, absent patellae, micrognathia syndrome","type":"related"}],"termid":"MONDO:0009143","terms_by_termid":{"MONDO:0009143":null},"xrefs":{"Monarch":{"xref_id":"0009143"}}}


id: GO:0009288
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A motor complex composed of an extracellular helical protein filament coupled to a rotary motor embedded in the cell envelope.","definition_xrefs":["Wikipedia:Flagellum#Bacterial","GOC:jh2","GOC:krc","GOC:mtg_sensu","GOC:cilia","PMID:7787060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection","termid":"GO:0042995"},{"relation_name":"is_a","term_name":"membraneless organelle","termid":"GO:0043228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum","synonyms":[{"name":"flagellin-based flagellum","type":"exact"}],"termid":"GO:0009288"}


id: PR:O60129
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fkh2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fork head protein homolog 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.15c","synonyms":[{"name":"Spom972h-fkh2","type":"exact"}],"termid":"PR:O60129"}


id: MONDO:0013536
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of porphyrin metabolism","termid":"MONDO:0017754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"heme oxygenase 1 deficiency","secondary_identifiers":["MESH:C564200","UMLS:C1841651","MEDGEN:333882","GARD:17995","OMIM:614034","Orphanet:562509"],"synonyms":[{"name":"HMOX1D","type":"related"},{"name":"heme oxygenase 1 deficiency","type":"exact"},{"name":"heme oxygenase-1 deficiency","type":"exact"}],"termid":"MONDO:0013536","xrefs":{"Monarch":{"xref_id":"0013536"}}}


id: MONDO:0004786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cholangitis that is persistent and long-standing.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholangitis","termid":"MONDO:0004789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"chronic cholangitis","secondary_identifiers":["UMLS:C0267918","SCTID:71912000","MEDGEN:82765","DOID:9439","NCIT:C35335"],"synonyms":[{"name":"cholangitis, chronic","type":"exact"}],"termid":"MONDO:0004786","xrefs":{"Monarch":{"xref_id":"0004786"}}}


id: GO:0071203
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that localizes at the surface of endosomes, where it recruits and activates the Arp2/3 complex to induce actin polymerization. In human, the WASH complex is composed of F-actin-capping protein subunits alpha and beta, WASH1, FAM21, KIAA1033, KIAA0196 and CCDC53.","definition_xrefs":["PMID:19922875","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"WASH complex","termid":"GO:0071203"}


id: GO:0004110
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 11-deoxycorticosterone = 20-hydroxy-3-oxopregn-4-en-21-al.","definition_xrefs":["EC:5.3.1.21","RHEA:17861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"corticosteroid side-chain-isomerase activity","secondary_identifiers":["KEGG_REACTION:R04165","MetaCyc:CORTICOSTEROID-SIDE-CHAIN-ISOMERASE-RXN"],"synonyms":[{"name":"11-deoxycorticosterone aldose-ketose-isomerase activity","type":"related"},{"name":"11-deoxycorticosterone ketol-isomerase activity","type":"related"}],"termid":"GO:0004110"}


id: PBO:0062055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily W member 2 pseudogene","termid":"PBO:0062055"}


id: GO:0097312
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the biofilm matrix, a structure lying external to bacterial cells. A biofilm is an aggregate of surface-associated bacteria, and the biofilm matrix is the envelope of polymeric substances that surrounds the bacteria.","definition_xrefs":["GOC:imk","Wikipedia:Biofilm","PMID:22571672"],"gene_count":0,"genotype_count":0,"name":"obsolete bacterial biofilm matrix component (obsolete GO:0097312)","synonyms":[{"name":"biofilm matrix part","type":"exact"}],"termid":"GO:0097312"}


id: PBO:0034813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein associated with respiratory chain (predicted)","termid":"PBO:0034813"}


id: PBO:0065892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB39A, member RAS oncogene family","termid":"PBO:0065892"}


id: GO:0099138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of a chimeric sorocarp in which cells of all genotypes have an equal chance of becoming a spore cell.","definition_xrefs":["PMID:18272966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chimeric sorocarp development","termid":"GO:0099134"},{"relation_name":"is_a","term_name":"altruistic, chimeric, non-reproductive fruiting body development","termid":"GO:0099137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"altruistic, chimeric sorocarp development","synonyms":[{"name":"fully co-operative, chimeric sorocarp development","type":"exact"}],"termid":"GO:0099138"}


id: GO:0006942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of striated muscle contraction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle contraction","termid":"GO:0006937"},{"relation_name":"regulates","term_name":"striated muscle contraction","termid":"GO:0006941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of striated muscle contraction","termid":"GO:0006942"}


id: PBO:0065764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide YY","termid":"PBO:0065764"}


id: PR:O74387
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rav2 gene.","definition_xrefs":["UniProtKB:O74387","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of V-ATPase in vacuolar membrane protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.12","synonyms":[{"name":"RAVE complex subunit rav2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rav2","type":"exact"}],"termid":"PR:O74387"}


id: PBO:0085077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear actin-related protein involved in chromatin remodeling; component of chromatin-remodeling enzyme complexes","termid":"PBO:0085077"}


id: MONDO:0020073
data:
  {"annotated_genes":["SJAG_01184","SJAG_02765","SJAG_04513","SJAG_00824"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024556"},{"annotations":[86625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014924"},{"annotations":[86624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014925"},{"annotations":[85520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013526"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy syndrome","termid":"MONDO:0015650"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00824":null,"SJAG_01184":null,"SJAG_02765":null,"SJAG_04513":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"adolescent-onset epilepsy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1842874","Orphanet:98260","GARD:19438","UMLS:C5681525"],"termid":"MONDO:0020073","terms_by_termid":{"MONDO:0013526":null,"MONDO:0014924":null,"MONDO:0014925":null,"MONDO:0024556":null},"xrefs":{"Monarch":{"xref_id":"0020073"}}}


id: FYPO:0001552
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of zinc ion measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular zinc level","synonyms":[{"name":"increased cellular zinc ion level","type":"exact"},{"name":"increased cellular zinc level during mitotic cell cycle","type":"related"},{"name":"increased cellular zinc level during vegetative growth","type":"exact"},{"name":"increased zinc accumulation","type":"related"}],"termid":"FYPO:0001552"}


id: GO:0097421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of lost or destroyed liver.","definition_xrefs":["PMID:19447520","GOC:gap"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver development","termid":"GO:0001889"},{"relation_name":"is_a","term_name":"animal organ regeneration","termid":"GO:0031100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"liver regeneration","termid":"GO:0097421"}


id: MONDO:0024465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary pulmonary alveolar proteinosis","termid":"MONDO:0012580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant metabolism dysfunction, pulmonary, 2","secondary_identifiers":["MESH:C567048","UMLS:C1970470","MEDGEN:410078","OMIM:610913"],"synonyms":[{"name":"SMDP2","type":"exact"},{"name":"desquamative interstitial pneumonitis due to surfactant Protein C deficiency","type":"exact"},{"name":"interstitial lung disease due to surfactant Protein C deficiency","type":"exact"},{"name":"pulmonary alveolar proteinosis, congenital, 2","type":"exact"},{"name":"surfactant metabolism dysfunction, pulmonary, 2","type":"exact"}],"termid":"MONDO:0024465","xrefs":{"Monarch":{"xref_id":"0024465"}}}


id: GO:0036124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of three methyl groups to lysine at position 9 of the histone.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K9 trimethylation (obsolete GO:0036124)","termid":"GO:0036124"}


id: GO:0043449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an alkene, any acyclic branched or unbranched hydrocarbon having one carbon-carbon double bond and the general formula CnH2n, as carried out by individual cells.","definition_xrefs":["Wikipedia:Alkene","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"olefin metabolic process","termid":"GO:1900673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alkene metabolic process","synonyms":[{"name":"alkene metabolism","type":"exact"}],"termid":"GO:0043449"}


id: MONDO:0030064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary episodic ataxia","termid":"MONDO:0016227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"episodic ataxia, type 9","secondary_identifiers":["DOID:0060965","UMLS:C5394520","OMIM:618924","MEDGEN:1714171"],"synonyms":[{"name":"EA9","type":"exact"},{"name":"EPISODIC ATAXIA, TYPE 9","type":"exact"},{"name":"episodic ataxia, type 9","type":"exact"}],"termid":"MONDO:0030064","xrefs":{"Monarch":{"xref_id":"0030064"}}}


id: PBO:0053838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1103","termid":"PBO:0053838"}


id: MONDO:0800365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX14 defect","termid":"MONDO:0100268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0019053","MONDO:0005066","MONDO:0005244","MONDO:0006025"],"is_obsolete":false,"name":"peroxisome biogenesis disorder, complementation group K","secondary_identifiers":["MEDGEN:356487","UMLS:C1866257"],"synonyms":[{"name":"CGK","type":"exact"}],"termid":"MONDO:0800365","xrefs":{"Monarch":{"xref_id":"0800365"}}}


id: PBO:0026661
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_inositol_starvation","termid":"PBO:0026661"}


id: PBO:0028083
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_envelope_morphology","termid":"PBO:0028083"}


id: GO:0052162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of calcium ion fluxes as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated perturbation of defense-related host calcium ion flux (obsolete GO:0052162)","synonyms":[{"name":"modulation by organism of defense-related calcium ion flux in other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by organism of defense-related host Ca2+ flux","type":"exact"},{"name":"modulation by symbiont of defense-related host calcium ion flux","type":"exact"}],"termid":"GO:0052162"}


id: PBO:0069441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 706, pseudogene","termid":"PBO:0069441"}


id: GO:1900997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of benzene.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00272","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene metabolic process","termid":"GO:0018910"},{"relation_name":"is_a","term_name":"hydrocarbon biosynthetic process","termid":"GO:0120251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"benzene biosynthetic process","synonyms":[{"name":"benzene anabolism","type":"exact"},{"name":"benzene biosynthesis","type":"exact"},{"name":"benzene formation","type":"exact"},{"name":"benzene synthesis","type":"exact"}],"termid":"GO:1900997"}


id: PBO:0074105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 28 member 2","termid":"PBO:0074105"}


id: GO:0010594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the orderly movement of an endothelial cell into the extracellular matrix to form an endothelium.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"endothelial cell migration","termid":"GO:0043542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endothelial cell migration","termid":"GO:0010594"}


id: GO:0010840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the wakeful phase of the circadian sleep/wake cycle. The wakeful phase is the part of the circadian sleep/wake cycle where the organism is not asleep.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circadian sleep/wake cycle","termid":"GO:0042749"},{"relation_name":"regulates","term_name":"circadian sleep/wake cycle, wakefulness","termid":"GO:0042746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of circadian sleep/wake cycle, wakefulness","termid":"GO:0010840"}


id: PBO:0055378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2808","termid":"PBO:0055378"}


id: PBO:0027671
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_response_to_mitotic_cell_cycle_spindle_assembly_checkpoint_signaling","termid":"PBO:0027671"}


id: MONDO:0020119
data:
  {"annotated_genes":["SJAG_04631","SJAG_00293","SJAG_03664","SJAG_04056","SJAG_03635","SJAG_01540","SJAG_00992","SJAG_00466","SJAG_01465","SJAG_01581","SJAG_04176","SJAG_00379","SJAG_05239","SJAG_04235","SJAG_03900","SJAG_01047","SJAG_03286","SJAG_02371","SJAG_01448","SJAG_00156"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010477"},{"annotations":[85369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010561"},{"annotations":[85757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010333"},{"annotations":[86619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010590"},{"annotations":[84570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010407"},{"annotations":[84800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010500"},{"annotations":[84788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030908"},{"annotations":[85410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030909"},{"annotations":[85963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010258"},{"annotations":[85445],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010671"},{"annotations":[86376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010457"},{"annotations":[86707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010398"},{"annotations":[86366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010574"},{"annotations":[86544,86543,86542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010355"},{"annotations":[86380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010461"},{"annotations":[86159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010286"},{"annotations":[84564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010665"},{"annotations":[84540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010655"},{"annotations":[85632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010306"},{"annotations":[85405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015601"},{"annotations":[84794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010496"}]},"cv_name":"mondo","definition":"A syndromic intellectual disability with an X-linked mode of inheritance.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"X-linked intellectual disability","termid":"MONDO:0100284"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00156":null,"SJAG_00293":null,"SJAG_00379":null,"SJAG_00466":null,"SJAG_00992":null,"SJAG_01047":null,"SJAG_01448":null,"SJAG_01465":null,"SJAG_01540":null,"SJAG_01581":null,"SJAG_02371":null,"SJAG_03286":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03900":null,"SJAG_04056":null,"SJAG_04176":null,"SJAG_04235":null,"SJAG_04631":null,"SJAG_05239":null},"genotype_count":0,"is_obsolete":false,"name":"X-linked syndromic intellectual disability","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:309510","DOID:0060309","Orphanet:98464"],"synonyms":[{"name":"X-linked syndromic intellectual disability","type":"exact"},{"name":"intellectual disability, X-linked syndromic","type":"exact"},{"name":"mental retardation, X-linked syndromic","type":"exact"},{"name":"syndromic X-linked intellectual disability","type":"exact"},{"name":"syndromic X-linked mental retardation","type":"exact"},{"name":"syndromic intellectual disability, X-linked","type":"exact"}],"termid":"MONDO:0020119","terms_by_termid":{"MONDO:0010258":null,"MONDO:0010286":null,"MONDO:0010306":null,"MONDO:0010333":null,"MONDO:0010355":null,"MONDO:0010398":null,"MONDO:0010407":null,"MONDO:0010457":null,"MONDO:0010461":null,"MONDO:0010477":null,"MONDO:0010496":null,"MONDO:0010500":null,"MONDO:0010561":null,"MONDO:0010574":null,"MONDO:0010590":null,"MONDO:0010655":null,"MONDO:0010665":null,"MONDO:0010671":null,"MONDO:0015601":null,"MONDO:0030908":null,"MONDO:0030909":null},"xrefs":{"Monarch":{"xref_id":"0020119"}}}


id: GO:0003421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the columnar cartilage along the axis of a long bone that contributes to bone growth.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axis specification","termid":"GO:0009798"},{"relation_name":"part_of","term_name":"growth plate cartilage morphogenesis","termid":"GO:0003422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"growth plate cartilage axis specification","synonyms":[{"name":"growth plate cartilage axis determination","type":"related"}],"termid":"GO:0003421"}


id: GO:0140301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The interactions (or cell to cell communication) that occur between the pollen grain (male gametophyte) and the stigmatic tissues of the female sporophyte after the pollen reaches the stigmatic papillae.","definition_xrefs":["PMID:27899537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pollen-pistil interaction","termid":"GO:0009875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen-stigma interaction","termid":"GO:0140301"}


id: GO:0004001
data:
  {"annotated_genes":["SJAG_01070"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[116337],"is_not":false,"summary":null,"term":"GO:0004001"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + adenosine = ADP + AMP.","definition_xrefs":["PMID:11223943","EC:2.7.1.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"nucleoside kinase activity","termid":"GO:0019206"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01070":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"adenosine kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:20824","Reactome:R-HSA-109624","Reactome:R-HSA-9754974","MetaCyc:ADENOSINE-KINASE-RXN"],"synonyms":[{"name":"ATP:adenosine 5'-phosphotransferase activity","type":"related"},{"name":"adenosine 5-phosphotransferase activity","type":"exact"},{"name":"adenosine kinase (phosphorylating)","type":"related"}],"termid":"GO:0004001","terms_by_termid":{"GO:0004001":null}}


id: PBO:0085536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S6, no bacterial homolog; phosphorylated on S233 by Ypk3p in a TORC1-dependent manner, and on S232 in a TORC1/2-dependent manner by Ypk1/2/3p; RPS6B has a paralog, RPS6A, that arose from the whole genome duplication","termid":"PBO:0085536"}


id: PBO:0090489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate synthase (GOGAT) Glt1","termid":"PBO:0090489"}


id: MONDO:0003646
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm with neuroendocrine differentiation that arises from the rectum. It includes well differentiated neuroendocrine tumors (low and intermediate grade) and poorly differentiated neuroendocrine carcinomas (high grade).","definition_xrefs":["NCIT:C5698"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"rectal cancer","termid":"MONDO:0006519"},{"relation_name":"is_a","term_name":"intestinal neuroendocrine neoplasm","termid":"MONDO:0002883"},{"relation_name":"is_a","term_name":"epithelial neoplasm of rectum","termid":"MONDO:0024476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"rectum neuroendocrine neoplasm","secondary_identifiers":["UMLS:C5554035","GARD:19756","DOID:5777","Orphanet:100081","MEDGEN:1810164"],"synonyms":[{"name":"NET of the rectum","type":"related"},{"name":"neuroendocrine neoplasm of rectum","type":"exact"},{"name":"neuroendocrine neoplasm of the rectum","type":"exact"},{"name":"neuroendocrine tumor of rectum","type":"related"},{"name":"neuroendocrine tumour of rectum","type":"related"},{"name":"rectal NET","type":"related"},{"name":"rectal neuroendocrine neoplasm","type":"exact"},{"name":"rectal neuroendocrine tumor","type":"related"},{"name":"rectum NET","type":"related"},{"name":"rectum neuroendocrine neoplasm","type":"exact"},{"name":"rectum neuroendocrine tumor","type":"related"},{"name":"rectum neuroendocrine tumor, well differentiated, low or intermediate grade","type":"related"},{"name":"rectum neuroendocrine tumour","type":"related"}],"termid":"MONDO:0003646","xrefs":{"Monarch":{"xref_id":"0003646"}}}


id: GO:0010798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the volume of a multivesicular body as part of the chemical reactions and pathways resulting in the breakdown of a protein or peptide covalently tagged with ubiquitin.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of multivesicular body size involved in ubiquitin-dependent protein catabolism (obsolete GO:0010798)","termid":"GO:0010798"}


id: PBO:0111877
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDR subfamily","termid":"PBO:0111877"}


id: PBO:0064887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit Bbeta","termid":"PBO:0064887"}


id: PBO:0002793
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.4","termid":"PBO:0002793"}


id: PBO:0088038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme; key E2 partner with Ubc4p for the anaphase-promoting complex (APC); mediates selective degradation of short-lived and abnormal proteins; plays a role in vesicle biogenesis and ER-associated protein degradation (ERAD); component of the cellular stress response; protein abundance increases in response to DNA replication stress key E2 partner with Ubc4p for the anaphase-promoting complex (APC)","termid":"PBO:0088038"}


id: PBO:0053648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 700","termid":"PBO:0053648"}


id: MONDO:0021204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of otitis media (disease).","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otitis media","termid":"MONDO:0005441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic otitis media","secondary_identifiers":["SCTID:21186006","icd11.foundation:38010200","MEDGEN:75751","ICD9:381.3","UMLS:C0271441"],"synonyms":[{"name":"chronic otitis media (disease)","type":"exact"},{"name":"otitis media (disease), chronic","type":"exact"}],"termid":"MONDO:0021204","xrefs":{"Monarch":{"xref_id":"0021204"}}}


id: GO:0048086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the developmental process that results in the deposition of coloring matter in an organism.","definition_xrefs":["GOC:jid","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental pigmentation","termid":"GO:0048070"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"negatively_regulates","term_name":"developmental pigmentation","termid":"GO:0048066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of developmental pigmentation","synonyms":[{"name":"down regulation of developmental pigmentation","type":"exact"},{"name":"down-regulation of developmental pigmentation","type":"exact"},{"name":"downregulation of developmental pigmentation","type":"exact"},{"name":"inhibition of pigmentation","type":"narrow"}],"termid":"GO:0048086"}


id: SO:0002074
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that falls in an intergenic region that is 1 kb or less between 2 genes.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intergenic_variant","termid":"SO:0001628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intergenic_1kb_variant","synonyms":[{"name":"ANNOVAR:upstream;downstream","type":"exact"}],"termid":"SO:0002074"}


id: PBO:0001883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein involved in autophagy Atg18a","termid":"PBO:0001883"}


id: SO:0001904
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-coding RNA transcribed from the opposite DNA strand compared with other transcripts and overlap in part with sense RNA.","definition_xrefs":["PMID:19638999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antisense_RNA","termid":"SO:0000644"},{"relation_name":"is_a","term_name":"lncRNA","termid":"SO:0001877"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense_lncRNA","synonyms":[{"name":"antisense lncRNA","type":"related"},{"name":"natural antisense transcript","type":"exact"}],"termid":"SO:0001904"}


id: MONDO:0020470
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"49,XYYYY is a rare Y chromosome number anomaly with a variable phenotype mainly characterized by moderate to severe intellectual disability, speech delay, hypotonia, and mild dysmorphic features, including facial asymmetry, hypertelorism, bilateral low set 'lop' ears, and micrognatia. Skeletal abnormalities (such as skull deformities, radioulnar synostosis, elbow flexion, clinodactyly, brachydactyly) and behavourial problems have also been associated with this condition. Genitalia are normal at birth, although hypogonadism and azoospermia has been reported in adults.","definition_xrefs":["Orphanet:99330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"chromosome Y disorder","termid":"MONDO:0700028"},{"relation_name":"is_a","term_name":"pentasomy","termid":"MONDO:0700085"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"49,XYYYY syndrome","secondary_identifiers":["MEDGEN:1384259","UMLS:C4518342","GARD:19679","SCTID:734028007"],"termid":"MONDO:0020470","xrefs":{"Monarch":{"xref_id":"0020470"}}}


id: MONDO:0043783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diffuse hardening of skin and subcutaneous adipose tissue, associated with minimal inflammation without fat necrosis, that typically affects critically ill preterm neonates during the first week of life.","definition_xrefs":["NCIT:C35009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"sclerema neonatorum","secondary_identifiers":["MESH:D012593","UMLS:C0036415","SCTID:206539008","icd11.foundation:1470028414","MEDGEN:20677"],"synonyms":[{"name":"sclerema adiposum","type":"related"},{"name":"sclerema neonatorum","type":"exact"},{"name":"underwood's disease","type":"related"}],"termid":"MONDO:0043783","xrefs":{"Monarch":{"xref_id":"0043783"}}}


id: GO:0047025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + OH-acyl-[acyl-carrier protein] = NADH + H+ + B-ketoacyl-[acyl-carrier protein].","definition_xrefs":["EC:1.1.1.212","MetaCyc:1.1.1.212-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein] reductase (NADH) activity","secondary_identifiers":["RHEA:19913"],"synonyms":[{"name":"(3R)-3-hydroxyacyl-acyl-carrier-protein:NAD+ oxidoreductase activity","type":"related"},{"name":"3-oxoacyl-ACP reductase (NADH) activity","type":"exact"},{"name":"3-oxoacyl-[acyl-carrier protein] reductase (NADH) activity","type":"exact"},{"name":"3-oxoacyl-acyl carrier protein (reduced nicotinamide adenine dinucleotide) reductase activity","type":"related"},{"name":"3-oxoacyl-acyl-carrier-protein reductase (NADH)","type":"related"}],"termid":"GO:0047025"}


id: PBO:0058684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6812","termid":"PBO:0058684"}


id: GO:0046075
data:
  {"annotated_genes":["SJAG_04665","SJAG_04627","SJAG_04657"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91922,88854,117524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dTTP, deoxyribosylthymine triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside triphosphate metabolic process","termid":"GO:0009211"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide metabolic process","termid":"GO:0009219"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dTTP metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dTTP metabolism","type":"exact"}],"termid":"GO:0046075","terms_by_termid":{"GO:0006235":null}}


id: PBO:0003103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle transcriptional repressor Whi5 (predicted)","termid":"PBO:0003103"}


id: GO:0042905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 9-cis-retinoic acid, a metabolically active vitamin A derivative.","definition_xrefs":["PMID:11279029","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoic acid metabolic process","termid":"GO:0042573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"9-cis-retinoic acid metabolic process","synonyms":[{"name":"9-cis-retinoic acid metabolism","type":"exact"}],"termid":"GO:0042905"}


id: PBO:0067785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 87","termid":"PBO:0067785"}


id: MONDO:0017493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"fibular hemimelia","termid":"MONDO:0019672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"fibular hemimelia, bilateral","secondary_identifiers":["icd11.foundation:1479927692","Orphanet:295083"],"synonyms":[{"name":"fibular longitudinal meromelia, bilateral","type":"exact"}],"termid":"MONDO:0017493","xrefs":{"Monarch":{"xref_id":"0017493"}}}


id: GO:0005691
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains small nuclear RNA U6atac, the Lsm2-8 heptameric ring complex, as well as several proteins that are unique to the U6atac snRNP, most of which remain associated with the U6atac snRNA both while the U6atac snRNP is free or assembled into the U4atac/U6atac snRNP or into a series of spliceosomal complexes.","definition_xrefs":["GOC:mah","ISBN:0879695897","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"U6atac snRNP","synonyms":[{"name":"snRNP U6atac","type":"exact"}],"termid":"GO:0005691"}


id: MONDO:0002161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fallopian tube carcinosarcoma (obsolete MONDO:0002161)","termid":"MONDO:0002161","xrefs":{"Monarch":{"xref_id":"0002161"}}}


id: PBO:0028374
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_mitomycin_C","termid":"PBO:0028374"}


id: GO:0036121
data:
  {"annotated_genes":["SJAG_03495","SJAG_03886","SJAG_04064"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78369,89280,117687],"is_not":false,"summary":null,"term":"GO:0036121"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O = ADP + phosphate, in the presence of double-stranded DNA; drives the unwinding of a DNA helix.","definition_xrefs":["GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA helicase activity","termid":"GO:0003678"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03495":null,"SJAG_03886":null,"SJAG_04064":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"double-stranded DNA helicase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0033676"],"synonyms":[{"name":"double-stranded DNA-dependent ATP-dependent DNA helicase activity","type":"exact"},{"name":"double-stranded DNA-dependent ATPase activity","type":"exact"},{"name":"dsDNA-dependent ATP-dependent DNA helicase activity","type":"exact"},{"name":"dsDNA-dependent ATPase activity","type":"exact"}],"termid":"GO:0036121","terms_by_termid":{"GO:0036121":null}}


id: MONDO:0016937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal duplication","termid":"MONDO:0000762"},{"relation_name":"is_a","term_name":"chromosome 19 disorder","termid":"MONDO:0700024"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of chromosome 19","secondary_identifiers":["UMLS:C4518507","MEDGEN:1379548","GARD:20857","Orphanet:262687","SCTID:726358004"],"synonyms":[{"name":"partial duplication of chromosome type 19","type":"exact"},{"name":"partial trisomy of chromosome 19","type":"exact"}],"termid":"MONDO:0016937","xrefs":{"Monarch":{"xref_id":"0016937"}}}


id: MONDO:0015418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lateral facial cleft (obsolete MONDO:0015418)","secondary_identifiers":["Orphanet:141269"],"synonyms":[{"name":"Tessier number 7 facial cleft","type":"exact"},{"name":"transverse facial cleft","type":"exact"}],"termid":"MONDO:0015418","xrefs":{"Monarch":{"xref_id":"0015418"}}}


id: MONDO:0007600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition in which the kidneys do not absorb certain substances into the body. These substances, such as cysteine, fructose, galactose, or glycogen, are lost in the urine. Fanconi syndrome is thought to be caused by genetic and environmental factors, and it may be diagnosed at any age. Symptoms of Fanconi syndrome include increased urine production (which may cause dehydration), weakness, and abnormalities of the bones.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited Fanconi renotubular syndrome","termid":"MONDO:0100238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"primary Fanconi syndrome","secondary_identifiers":["NCIT:C123229","Orphanet:3337","MEDGEN:341765","UMLS:C1857395","GARD:9118"],"synonyms":[{"name":"FRTS1","type":"narrow"},{"name":"Fanconi renotubular syndrome 1","type":"narrow"},{"name":"primary Fanconi renotubular syndrome","type":"narrow"}],"termid":"MONDO:0007600","xrefs":{"Monarch":{"xref_id":"0007600"}}}


id: GO:0002816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of biosynthesis of antibacterial peptides active against Gram-positive bacteria.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antibacterial peptide biosynthetic process","termid":"GO:0002808"},{"relation_name":"regulates","term_name":"biosynthetic process of antibacterial peptides active against Gram-positive bacteria","termid":"GO:0002815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","termid":"GO:0002816"}


id: GO:0008162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclodiene resistance (obsolete GO:0008162)","synonyms":[{"name":"cyclodiene resistance","type":"exact"}],"termid":"GO:0008162"}


id: GO:0051691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages, as carried out by individual cells.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular oligosaccharide metabolic process (obsolete GO:0051691)","synonyms":[{"name":"cellular oligosaccharide metabolism","type":"exact"}],"termid":"GO:0051691"}


id: GO:0060497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information between a mesenchymal cell and an endodermal cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"mesenchymal-endodermal cell signaling","synonyms":[{"name":"mesenchymal-endodermal cell signalling","type":"exact"}],"termid":"GO:0060497"}


id: PBO:0087895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; activated by proteolytic processing in response to signals from the SPS sensor system for external amino acids; activates transcription of amino acid permease genes; STP2 has a paralog, STP1, that arose from the whole genome duplication","termid":"PBO:0087895"}


id: PBO:0030005
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sporulation_resulting_in_formation_of_azygotic_ascus_with_more_or_fewer_than_four_spores","termid":"PBO:0030005"}


id: GO:0100015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates inositol biosynthetic process.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of inositol biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100015)","termid":"GO:0100015"}


id: PBO:0067186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 246, pseudogene","termid":"PBO:0067186"}


id: PR:Q9P6S4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu25 gene.","definition_xrefs":["UniProtKB:Q9P6S4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 25 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27.03","synonyms":[{"name":"Spom972h-meu25","type":"exact"}],"termid":"PR:Q9P6S4"}


id: GO:1990910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension combined with low atmospheric pressure. Hypoxia is defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95% and hypobaric is defined as atmospheric pressure below 0.74 atm (greater than 2,500 m above sea level).","definition_xrefs":["PMID:24590457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hypoxia","termid":"GO:0001666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hypobaric hypoxia","termid":"GO:1990910"}


id: PBO:0088362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine(37)-N(1))-methyltransferase activity Trm5","termid":"PBO:0088362"}


id: PBO:0041966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 9","termid":"PBO:0041966"}


id: GO:0102489
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + 2 H2O = GMP + 2 hydrogenphosphate + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete GTP phosphohydrolase activity (obsolete GO:0102489)","termid":"GO:0102489"}


id: PBO:0000918
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.10","termid":"PBO:0000918"}


id: GO:1904424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of GTP binding.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:19066305","PMID:21454546"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of GTP binding (obsolete GO:1904424)","termid":"GO:1904424"}


id: SO:0002126
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variable gene that rearranges at the DNA level and codes the variable region of the variable domain of an Immunoglobulin chain.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html","IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin_gene","termid":"SO:0002122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IG_V_gene","synonyms":[{"name":"IGV_gene","type":"exact"},{"name":"IG_variable_gene","type":"exact"},{"name":"Immunoglobulin_variable_gene","type":"exact"}],"termid":"SO:0002126"}


id: GO:0002282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a microglial cell resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microglial cell activation","termid":"GO:0001774"},{"relation_name":"is_a","term_name":"macrophage activation involved in immune response","termid":"GO:0002281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microglial cell activation involved in immune response","synonyms":[{"name":"microglial cell activation during immune response","type":"related"}],"termid":"GO:0002282"}


id: FYPO:0005006
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the phosphorylation of serine residues of one or more specific proteins is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete normal protein serine phosphorylation (obsolete FYPO:0005006)","synonyms":[{"name":"normal peptidyl-serine phosphorylation","type":"exact"}],"termid":"FYPO:0005006"}


id: PBO:0091682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense RNA (CUT) Cti6","termid":"PBO:0091682"}


id: MONDO:0017220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Laryngo-tracheo-esophageal cleft (LC) type 0 is a congenital respiratory tract anomaly characterized by a submucosal laryngo-tracheo-esophageal cleft with minor symptoms or an asymptomatic course.","definition_xrefs":["Orphanet:280205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngotracheoesophageal cleft","termid":"MONDO:0016060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"laryngotracheoesophageal cleft type 0","secondary_identifiers":["GARD:21072","UMLS:C5438977","MEDGEN:1760178"],"synonyms":[{"name":"LTEC0","type":"exact"},{"name":"laryngo-tracheo-esophageal cleft type 0","type":"exact"}],"termid":"MONDO:0017220","xrefs":{"Monarch":{"xref_id":"0017220"}}}


id: MONDO:0019570
data:
  {"annotated_genes":["SJAG_04114"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85561],"is_not":false,"summary":null,"term":"MONDO:0019570"}]},"cv_name":"mondo","definition":"Cockayne syndrome caused by mutation(s) in the ERCC6 gene, encoding DNA excision repair protein ERCC-6.","definition_xrefs":["NCIT:C135726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cockayne syndrome","termid":"MONDO:0016006"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04114":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0019303","MONDO:0021190"],"is_obsolete":false,"name":"Cockayne syndrome type 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:1420","icd11.foundation:1604701958","OMIM:133540","Orphanet:90322","MEDGEN:155487","UMLS:C0751038","DOID:0080908"],"synonyms":[{"name":"CSB","type":"related"},{"name":"Cockayne syndrome B","type":"exact"},{"name":"Cockayne syndrome type 2","type":"exact"},{"name":"Cockayne syndrome type B","type":"exact"},{"name":"Cockayne syndrome type II","type":"exact"},{"name":"Cockayne syndrome, type B","type":"exact"}],"termid":"MONDO:0019570","terms_by_termid":{"MONDO:0019570":null},"xrefs":{"Monarch":{"xref_id":"0019570"}}}


id: PBO:0000692
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.3.3","termid":"PBO:0000692"}


id: PBO:0089980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ protein Xdj1","termid":"PBO:0089980"}


id: PBO:0001180
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubp Five interacting potential Transmembrane Protein","termid":"PBO:0001180"}


id: PBO:0017931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Mgr2 (predicted)","termid":"PBO:0017931"}


id: PBO:0062664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily F member 1","termid":"PBO:0062664"}


id: PBO:0029992
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_thiamine_starvation","termid":"PBO:0029992"}


id: PBO:0040813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BICD family like cargo adaptor 2","termid":"PBO:0040813"}


id: PBO:0047789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box D4 like 6","termid":"PBO:0047789"}


id: PBO:0058343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4716","termid":"PBO:0058343"}


id: PBO:0060544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAV2 antisense RNA 4","termid":"PBO:0060544"}


id: GO:2001309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the epipolythiodioxopiperazine gliotoxin, a poisonous substance produced by some species of fungi.","definition_xrefs":["GOC:di","PMID:18272357","PMID:17574915","PMID:16333108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mycotoxin catabolic process","termid":"GO:0043387"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"detoxification of nitrogen compound","termid":"GO:0051410"},{"relation_name":"is_a","term_name":"gliotoxin metabolic process","termid":"GO:2001308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0006790","GO:0019748","GO:0044248","GO:0008150","GO:0098754"],"is_obsolete":false,"name":"gliotoxin catabolic process","synonyms":[{"name":"gliotoxin breakdown","type":"exact"},{"name":"gliotoxin catabolism","type":"exact"},{"name":"gliotoxin degradation","type":"exact"}],"termid":"GO:2001309"}


id: GO:0050541
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-carotene + O2 = beta-apo-10'-carotenal + beta-ionone.","definition_xrefs":["PMID:11278918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor","termid":"GO:0016634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"beta,beta-carotene-9',10'-dioxygenase activity","synonyms":[{"name":"b,b-carotene-9',10'-dioxygenase activity","type":"exact"}],"termid":"GO:0050541"}


id: GO:0006241
data:
  {"annotated_genes":["SJAG_02887","SJAG_05024","SJAG_00533","SJAG_03708"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99568],"is_not":false,"summary":null,"term":"GO:0006241"},{"annotations":[87259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[114408,92449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside triphosphate biosynthetic process","termid":"GO:0009209"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide biosynthetic process","termid":"GO:0009220"},{"relation_name":"is_a","term_name":"CTP metabolic process","termid":"GO:0046036"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_02887":null,"SJAG_03708":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"CTP biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CTP anabolism","type":"exact"},{"name":"CTP biosynthesis","type":"exact"},{"name":"CTP formation","type":"exact"},{"name":"CTP synthesis","type":"exact"}],"termid":"GO:0006241","terms_by_termid":{"GO:0006241":null,"GO:0044210":null,"GO:0044211":null}}


id: MONDO:0022556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete oculo-cerebral dysplasia (obsolete MONDO:0022556)","termid":"MONDO:0022556","xrefs":{"Monarch":{"xref_id":"0022556"}}}


id: GO:0102952
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + coniferyl aldehyde = H+ + coniferaldehyde glucoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose:coniferaldehyde 4-beta-D-glucosyltransferase activity (obsolete GO:0102952)","termid":"GO:0102952"}


id: GO:0019359
data:
  {"annotated_genes":["SJAG_02889","SJAG_02618","SJAG_01500","SJAG_03946","SJAG_04693","SJAG_01566","SJAG_03298","SJAG_00957","SJAG_01359","SJAG_01582"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98843,90132,90555,112583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034356"},{"annotations":[99561,116797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[88495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[91404,95943,96966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006741"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinamide nucleotides, any nucleotide that contains combined nicotinamide.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridine nucleotide biosynthetic process","termid":"GO:0019363"},{"relation_name":"is_a","term_name":"nicotinamide nucleotide metabolic process","termid":"GO:0046496"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01359":null,"SJAG_01500":null,"SJAG_01566":null,"SJAG_01582":null,"SJAG_02618":null,"SJAG_02889":null,"SJAG_03298":null,"SJAG_03946":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"nicotinamide nucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nicotinamide nucleotide anabolism","type":"exact"},{"name":"nicotinamide nucleotide biosynthesis","type":"exact"},{"name":"nicotinamide nucleotide formation","type":"exact"},{"name":"nicotinamide nucleotide synthesis","type":"exact"}],"termid":"GO:0019359","terms_by_termid":{"GO:0006741":null,"GO:0009435":null,"GO:0034355":null,"GO:0034356":null}}


id: GO:0033164
data:
  {"annotated_genes":["SJAG_04770","SJAG_00295","SJAG_03056"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86987,90709],"is_not":false,"summary":null,"term":"GO:0033164"},{"annotations":[101803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102704"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an alpha-D-mannosyl residue from GDP-mannose into lipid-linked oligosaccharide, forming an alpha-(1->6)-D-mannosyl-D-mannose linkage.","definition_xrefs":["PMID:16878994","PMID:2644248","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-1,6-mannosyltransferase activity","termid":"GO:0000009"},{"relation_name":"is_a","term_name":"glycolipid mannosyltransferase activity","termid":"GO:0004376"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00295":null,"SJAG_03056":null,"SJAG_04770":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"glycolipid 1,6-alpha-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:2.4.1.232-RXN","EC:2.4.1.232"],"synonyms":[{"name":"GDP-mannose:glycolipid 1,6-alpha-D-mannosyltransferase activity","type":"related"},{"name":"GDP-mannose:oligosaccharide 1,6-alpha-D-mannosyltransferase activity","type":"related"},{"name":"GDP-mannose:oligosaccharide 6-alpha-D-mannosyltransferase activity","type":"related"},{"name":"glycolipid 6-alpha-mannosyltransferase activity","type":"exact"},{"name":"initiation-specific alpha-1,6-mannosyltransferase activity","type":"related"}],"termid":"GO:0033164","terms_by_termid":{"GO:0033164":null,"GO:0102704":null}}


id: PBO:0045638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 50 (pseudogene)","termid":"PBO:0045638"}


id: SO:0002355
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene encoding a hpRNA.","definition_xrefs":["PMID:25544562","PMID:18719707","PMID:18463630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hpRNA_gene","synonyms":[{"name":"Hairpin RNA gene","type":"exact"}],"termid":"SO:0002355"}


id: PBO:0042392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD300 molecule like family member f","termid":"PBO:0042392"}


id: SO:0001949
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 3nd residue (an arginine), from the start of the H4 protein is di-methylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_methylation_site","termid":"SO:0001701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H4R3_dimethylation_site","synonyms":[{"name":"H4R3 dimethylation site","type":"exact"},{"name":"H4R3me2","type":"exact"}],"termid":"SO:0001949"}


id: GO:0072111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of the population in the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in kidney development","termid":"GO:0072111"}


id: PBO:0039423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiopoietin like 3","termid":"PBO:0039423"}


id: GO:1990626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The membrane organization process that joins two mitochondrial outer membranes to form a single membrane.","definition_xrefs":["GOC:vw","PMID:21385840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"outer mitochondrial membrane organization","termid":"GO:0007008"},{"relation_name":"part_of","term_name":"mitochondrial fusion","termid":"GO:0008053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"part_of","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0007005"],"is_obsolete":false,"name":"mitochondrial outer membrane fusion","synonyms":[{"name":"mitochondrion outer membrane fusion","type":"exact"}],"termid":"GO:1990626"}


id: PBO:0054316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1708","termid":"PBO:0054316"}


id: PBO:0061579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NTM intronic transcript","termid":"PBO:0061579"}


id: GO:0061233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mesonephric glomerular basement membrane over time, from its formation to the mature structure. The mesonephric glomerular basement membrane is the basal laminal portion of the mesonephric glomerulus which performs the actual filtration.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular basement membrane development","termid":"GO:0032836"},{"relation_name":"part_of","term_name":"mesonephric glomerulus development","termid":"GO:0061224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular basement membrane development","termid":"GO:0061233"}


id: GO:0046019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involving pheromones that modulates the frequency, rate or extent or transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:txnOH","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter by pheromones (obsolete GO:0046019)","synonyms":[{"name":"regulation of transcription from Pol II promoter by pheromones","type":"exact"}],"termid":"GO:0046019"}


id: PBO:0068251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 28S ribosomal N3","termid":"PBO:0068251"}


id: PBO:0028119
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_lateral_cortical_node,_with_protein_distributed_in_plasma_membrane_or_cortex","termid":"PBO:0028119"}


id: GO:0003202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where an endocardial cushion cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell that will give rise to the cardiac skeleton.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocardial cushion to mesenchymal transition","termid":"GO:0090500"},{"relation_name":"part_of","term_name":"cardiac skeleton development","termid":"GO:0003204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cushion to mesenchymal transition involved in cardiac skeleton development","termid":"GO:0003202"}


id: PBO:0034653
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_maintenance_of_protein_localization_in_vacuole,_with_protein_secreted","termid":"PBO:0034653"}


id: PBO:0029257
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0029257"}


id: FYPO:0004004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which pre-replicative complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal protein-containing complex assembly","termid":"FYPO:0006839"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal pre-replicative complex assembly","synonyms":[{"name":"normal pre-RC assembly","type":"exact"},{"name":"normal pre-replicative complex assembly during mitotic cell cycle","type":"related"},{"name":"normal pre-replicative complex assembly during vegetative growth","type":"exact"},{"name":"normal pre-replicative complex formation","type":"exact"}],"termid":"FYPO:0004004"}


id: PBO:0001510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YEATS family histone acetyltransferase subunit Yaf9","termid":"PBO:0001510"}


id: GO:0000457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Endonucleolytic cleavage to separate a pre-SSU-rRNA from a pre-LSU-rRNA originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the Large Subunit (LSU) rRNA, and the 5S rRNA, in that order, from 5' to 3' along the primary transcript. Note that the use of the word tricistronic refers only to the number of mature rRNA molecules which will be produced from the primary transcript and ignores tRNAs that may also be present within the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)","termid":"GO:0000449"},{"relation_name":"part_of","term_name":"maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S)","termid":"GO:0002108"},{"relation_name":"part_of","term_name":"maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S)","termid":"GO:0002109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0010467","GO:0044085","GO:0008150","GO:0042254"],"is_obsolete":false,"name":"endonucleolytic cleavage between SSU-rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)","termid":"GO:0000457"}


id: PBO:0071740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 38","termid":"PBO:0071740"}


id: MONDO:1011763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal acrodermatitis, non-human animal","secondary_identifiers":["OMIA:002146"],"termid":"MONDO:1011763","xrefs":{"Monarch":{"xref_id":"1011763"}}}


id: PBO:0053998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1322","termid":"PBO:0053998"}


id: PBO:0026712
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_viability_in_stationary_phase_upon_glucose_starvation","termid":"PBO:0026712"}


id: PBO:0059165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein MPV17","termid":"PBO:0059165"}


id: PBO:0051840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin receptor substrate 2","termid":"PBO:0051840"}


id: PBO:0069065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 312, pseudogene","termid":"PBO:0069065"}


id: PBO:0069341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 601, pseudogene","termid":"PBO:0069341"}


id: MONDO:0018281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital muscular dystrophy with hyperlaxity is a rare, genetic neuromuscular disease characterized by congenital hypotonia, generalized, slowly progressive muscular weakness, and proximal joint contractures with distal joint hypermobility and hyperlaxity. Scoliosis or rigidity of the spine and delayed motor milestones are also frequently reported. Other manifestations include a long myopathic face and, in rare cases, respiratory failure, mild to moderate intellectual deficiency and short stature. Ambulation may be impaired with time.","definition_xrefs":["Orphanet:371007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"congenital muscular dystrophy with hyperlaxity","secondary_identifiers":["UMLS:C4706389","GARD:21600","MEDGEN:1633415","SCTID:763314009"],"synonyms":[{"name":"CMDH","type":"exact"}],"termid":"MONDO:0018281","xrefs":{"Monarch":{"xref_id":"0018281"}}}


id: PBO:0061033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ninein like","termid":"PBO:0061033"}


id: GO:1903977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glial cell migration.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GO_REF:0000058","GOC:nc","PMID:19100238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"regulation of glial cell migration","termid":"GO:1903975"},{"relation_name":"positively_regulates","term_name":"glial cell migration","termid":"GO:0008347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glial cell migration","synonyms":[{"name":"activation of glia cell migration","type":"narrow"},{"name":"activation of glial cell migration","type":"narrow"},{"name":"positive regulation of glia cell migration","type":"exact"},{"name":"up regulation of glia cell migration","type":"exact"},{"name":"up regulation of glial cell migration","type":"exact"},{"name":"up-regulation of glia cell migration","type":"exact"},{"name":"up-regulation of glial cell migration","type":"exact"},{"name":"upregulation of glia cell migration","type":"exact"},{"name":"upregulation of glial cell migration","type":"exact"}],"termid":"GO:1903977"}


id: PBO:0028167
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_crossover_junction_endodeoxyribonuclease_activity","termid":"PBO:0028167"}


id: PR:Q8NKC1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB21E7.04c gene.","definition_xrefs":["UniProtKB:Q8NKC1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catechol O-methyltransferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB21E7.04c","synonyms":[{"name":"Spom972h-SPBPB21E7.04c","type":"exact"}],"termid":"PR:Q8NKC1"}


id: PBO:0053038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"La ribonucleoprotein 1, translational regulator","termid":"PBO:0053038"}


id: PR:O94270
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ER lumen protein-retaining receptor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER lumen protein-retaining receptor (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.22","secondary_identifiers":["UniProtKB:O94270"],"synonyms":[{"name":"SPBP8B7.22","type":"related"},{"name":"Spom972h-KDELR1","type":"exact"}],"termid":"PR:O94270"}


id: GO:0106407
data:
  {"annotated_genes":["SJAG_03280"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86857],"is_not":false,"summary":null,"term":"GO:0106407"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: Glc(2)Man(9)GlcNAc(2)-[protein] + H2O = GlcMan(9)GlcNAc(2)-[protein] + beta-D-glucopyranose.","definition_xrefs":["PMID:30389790","EC:3.2.1.207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucosidase activity","termid":"GO:0090599"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03280":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"Glc2Man9GlcNAc2 oligosaccharide glucosidase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glucosidase II","type":"broad"}],"termid":"GO:0106407","terms_by_termid":{"GO:0106407":null}}


id: MONDO:0015369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Joubert syndrome (JS) and related disorders (JSRD) are a group of developmental delay/multiple congenital anomaly syndromes in which the mandatory feature is the \\\"molar tooth sign'' (MTS), a complex midbrain-hindbrain malformation recognizable on brain imaging. The MTS is characterized by cerebellar vermis hypodysplasia, thickening and malorientation of the superior cerebellar peduncles and abnormally deep interpeduncular fossa.","definition_xrefs":["Orphanet:140874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive congenital cerebellar ataxia","termid":"MONDO:0020043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Joubert syndrome and related disorders","secondary_identifiers":["MEDGEN:1826007","NANDO:2100218","UMLS:C5679612","NANDO:1200661","GARD:19931","NANDO:2200824"],"synonyms":[{"name":"JSRD","type":"exact"},{"name":"Joubert syndrome and related disorders","type":"exact"}],"termid":"MONDO:0015369","xrefs":{"Monarch":{"xref_id":"0015369"}}}


id: PBO:0074982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-24","termid":"PBO:0074982"}


id: GO:1904854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a proteasome core complex.","definition_xrefs":["PMID:16096059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"proteasome core complex binding","synonyms":[{"name":"20S core complex binding","type":"narrow"},{"name":"20S proteasome binding","type":"narrow"},{"name":"PA28gamma-20S proteasome binding","type":"narrow"},{"name":"macropain binding","type":"exact"}],"termid":"GO:1904854"}


id: GO:0086089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by a voltage-gated channel through the plasma membrane of an atrial cardiomyocyte contributing to the repolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel activity involved in cardiac muscle cell action potential repolarization","termid":"GO:0086008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization","synonyms":[{"name":"voltage-gated potassium channel activity involved in atrial cardiomyocyte action potential repolarization","type":"exact"}],"termid":"GO:0086089"}


id: GO:0070495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of thrombin-activated receptor protein signaling pathway activity. A thrombin receptor signaling pathway is the series of molecular signals generated as a consequence of a thrombin-activated receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"},{"relation_name":"is_a","term_name":"regulation of thrombin-activated receptor signaling pathway","termid":"GO:0070494"},{"relation_name":"negatively_regulates","term_name":"thrombin-activated receptor signaling pathway","termid":"GO:0070493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of thrombin-activated receptor signaling pathway","synonyms":[{"name":"negative regulation of thrombin receptor signaling pathway","type":"exact"},{"name":"negative regulation of thrombin receptor signalling pathway","type":"related"}],"termid":"GO:0070495"}


id: GO:1900782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving fumiquinazoline F.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete fumiquinazoline F metabolic process (obsolete GO:1900782)","synonyms":[{"name":"fumiquinazoline F metabolism","type":"exact"}],"termid":"GO:1900782"}


id: GO:2000212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of glutamate metabolic process.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amino acid metabolic process","termid":"GO:0045763"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of glutamate metabolic process","termid":"GO:2000211"},{"relation_name":"negatively_regulates","term_name":"glutamate metabolic process","termid":"GO:0006536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"negative regulation of glutamate metabolic process","synonyms":[{"name":"negative regulation of glutamate metabolism","type":"exact"},{"name":"negative regulation of glutamic acid metabolic process","type":"exact"},{"name":"negative regulation of glutamic acid metabolism","type":"exact"}],"termid":"GO:2000212"}


id: SOFP:status
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"Annotation workflow status","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"status","termid":"SOFP:status"}


id: GO:0016543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process during courtship, where the male orients towards a potential partner. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:sensu","PMID:11092827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male courtship behavior","termid":"GO:0008049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male courtship behavior, orientation prior to leg tapping and wing vibration","synonyms":[{"name":"male courtship behavior, orientation","type":"related"},{"name":"male courtship behaviour, orientation","type":"related"},{"name":"male courtship behaviour, orientation prior to leg tapping and wing vibration","type":"related"}],"termid":"GO:0016543"}


id: MONDO:0020235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lens size anomaly (obsolete MONDO:0020235)","secondary_identifiers":["Orphanet:98652"],"termid":"MONDO:0020235","xrefs":{"Monarch":{"xref_id":"0020235"}}}


id: FYPO:0007596
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitophagy, i.e. autophagic degradation of the mitochondria, is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitophagy","termid":"FYPO:0000500"},{"relation_name":"is_a","term_name":"abnormal mitophagy during nitrogen starvation","termid":"FYPO:0007593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased mitophagy during nitrogen starvation","synonyms":[{"name":"decreased autophagy of mitochondrion during nitrogen depletion","type":"exact"},{"name":"decreased autophagy of mitochondrion during nitrogen deprivation","type":"exact"},{"name":"decreased autophagy of mitochondrion during nitrogen starvation","type":"exact"},{"name":"reduced autophagy of mitochondrion during nitrogen starvation","type":"exact"}],"termid":"FYPO:0007596"}


id: PBO:0062309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily T member 1","termid":"PBO:0062309"}


id: MONDO:0015126
data:
  {"annotated_genes":["SJAG_00260","SJAG_03920","SJAG_02398"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84889,84887,84888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011740"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_02398":null,"SJAG_03920":null},"genotype_count":0,"is_obsolete":false,"name":"polyendocrinopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:101956","UMLS:C5681797","GARD:19800","MEDGEN:1826133"],"termid":"MONDO:0015126","terms_by_termid":{"MONDO:0011740":null},"xrefs":{"Monarch":{"xref_id":"0015126"}}}


id: GO:0080050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of seed development.","definition_xrefs":["PMID:19141706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"seed development","termid":"GO:0048316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of seed development","termid":"GO:0080050"}


id: PBO:0066701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA component of mitochondrial RNA processing endoribonuclease pseudogene 5","termid":"PBO:0066701"}


id: MONDO:0005543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune hepatitis characterized by the presence of antinuclear antibody (ANA) and antismooth-muscle antibody (ASMA).","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune hepatitis","termid":"MONDO:0016264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"autoimmune hepatitis type 1","secondary_identifiers":["SCTID:721711009","UMLS:C4303164","Orphanet:563576","ICD9:571.49","SCTID:197284004","icd11.foundation:260422751","GARD:22251","MEDGEN:928833"],"synonyms":[{"name":"autoimmune hepatitis type 1","type":"exact"},{"name":"type 1 AIH","type":"exact"}],"termid":"MONDO:0005543","xrefs":{"Monarch":{"xref_id":"0005543"}}}


id: PBO:0044479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 21 subfamily A member 2","termid":"PBO:0044479"}


id: PBO:0090935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose-phosphate pyrophosphokinase Prs5","termid":"PBO:0090935"}


id: GO:0031774
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a leukotriene receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"leukotriene receptor binding","synonyms":[{"name":"leukotriene receptor ligand","type":"narrow"}],"termid":"GO:0031774"}


id: PBO:0038604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA acetyltransferase 1","termid":"PBO:0038604"}


id: PBO:0070895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 3","termid":"PBO:0070895"}


id: MONDO:0002637
data:
  {"annotated_genes":["SJAG_00570","SJAG_01407"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009756"},{"annotations":[85690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011871"},{"annotations":[85683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011873"}]},"cv_name":"mondo","definition":"A morphologic finding indicating tissue infiltration by non-neoplastic or neoplastic histiocytes.","definition_xrefs":["NCIT:C3106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic system disorder","termid":"MONDO:0005833"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00570":null,"SJAG_01407":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"histiocytosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:6845","MESH:D015614","ONCOTREE:HDCN","DOID:3405","UMLS:C0019618","NANDO:2100005"],"synonyms":[{"name":"chronic histiocytosis X","type":"exact"},{"name":"hand Schuller Christian disease","type":"exact"},{"name":"histiocytic and dendritic cell neoplasms","type":"related"},{"name":"histiocytic infiltrate","type":"exact"},{"name":"histiocytic syndrome","type":"exact"}],"termid":"MONDO:0002637","terms_by_termid":{"MONDO:0009756":null,"MONDO:0011871":null,"MONDO:0011873":null},"xrefs":{"Monarch":{"xref_id":"0002637"}}}


id: PBO:0084909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitogen-activated protein kinase involved in osmoregulation; controls global reallocation of RNAPII during osmotic shock; mediates recruitment/activation of RNAPII at Hot1p-dependent promoters; binds calmodulin; stimulates antisense transcription to activate CDC28; defines novel S-phase checkpoint with Mrc1p that prevent replication/transcription conflicts; nuclear form represses pseudohyphal growth; autophosphorylates; protein abundance increases under DNA replication stress","termid":"PBO:0084909"}


id: PBO:0048826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 11","termid":"PBO:0048826"}


id: FYPO:0003076
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the autophosphorylation of one or more specific proteins, or of specific protein sites, is normal (i.e. indistinguishable from wild type). Protein autophosphorylation is the phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein.","definition_xrefs":["GO:0031952","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal protein autophosphorylation during vegetative growth","synonyms":[{"name":"normal protein autophosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003076"}


id: MONDO:0020765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuropathy, congenital hypomelinating","termid":"MONDO:0033352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0002320"],"is_obsolete":false,"name":"neuropathy, congenital hypomyelinating, 2","secondary_identifiers":["MEDGEN:1648446","OMIM:618184","UMLS:C4722277"],"synonyms":[{"name":"CHN2","type":"exact"},{"name":"NEUROPATHY, CONGENITAL HYPOMYELINATING, 2","type":"exact"},{"name":"hypomyelinating neuropathy, congenital, 2","type":"exact"}],"termid":"MONDO:0020765","xrefs":{"Monarch":{"xref_id":"0020765"}}}


id: PBO:0050474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A2","termid":"PBO:0050474"}


id: GO:0050103
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,4-alpha-D-glucosyl(n) + 1,6-alpha-D-glucosyl(m) = 1,4-alpha-D-glucosyl(n-1) + 1,6-alpha-D-glucosyl(m+1).","definition_xrefs":["MetaCyc:DEXTRIN-DEXTRANASE-RXN","EC:2.4.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"dextrin dextranase activity","secondary_identifiers":["RHEA:14625"],"synonyms":[{"name":"1,4-alpha-D-glucan:1,6-alpha-D-glucan 6-alpha-D-glucosyltransferase activity","type":"related"},{"name":"dextran dextrinase activity","type":"related"},{"name":"dextrin 6-glucosyltransferase activity","type":"related"}],"termid":"GO:0050103"}


id: PBO:0044960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase 4 like 2","termid":"PBO:0044960"}


id: MONDO:0034054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"severe combined immunodeficiency","termid":"MONDO:0015974"},{"relation_name":"is_a","term_name":"lymphoproliferative syndrome","termid":"MONDO:0016537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"severe combined immunodeficiency due to CD70 deficiency","secondary_identifiers":["Orphanet:538958","GARD:17978","MEDGEN:1799982","OMIM:618261","UMLS:C5568559"],"synonyms":[{"name":"lymphoproliferative syndrome 3","type":"exact"}],"termid":"MONDO:0034054","xrefs":{"Monarch":{"xref_id":"0034054"}}}


id: PR:O14349
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC30D10.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP-specific 5'-nucleotidase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.03c","synonyms":[{"name":"Spom972h-SPBC30D10.03c","type":"exact"}],"termid":"PR:O14349"}


id: GO:0007561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The eversion (turning inside out) of imaginal discs from their peripodial sacs, resulting in movement of the epithelium to the outside of the larval epidermis.","definition_xrefs":["PMID:11494317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc eversion","termid":"GO:0007561"}


id: GO:1905127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of axo-dendritic protein transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:20694152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular protein transport","termid":"GO:0090317"},{"relation_name":"is_a","term_name":"regulation of axo-dendritic protein transport","termid":"GO:1905126"},{"relation_name":"negatively_regulates","term_name":"axo-dendritic protein transport","termid":"GO:0099640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of axo-dendritic protein transport","synonyms":[{"name":"down regulation of axo-dendritic protein transport","type":"exact"},{"name":"down regulation of axonal protein transport","type":"narrow"},{"name":"down-regulation of axo-dendritic protein transport","type":"exact"},{"name":"down-regulation of axonal protein transport","type":"narrow"},{"name":"downregulation of axo-dendritic protein transport","type":"exact"},{"name":"downregulation of axonal protein transport","type":"narrow"},{"name":"inhibition of axo-dendritic protein transport","type":"narrow"},{"name":"inhibition of axonal protein transport","type":"narrow"},{"name":"negative regulation of axonal protein transport","type":"narrow"}],"termid":"GO:1905127"}


id: MONDO:0002716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm affecting the spinal cord during childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spinal cord cancer","termid":"MONDO:0003544"},{"relation_name":"is_a","term_name":"childhood neoplasm","termid":"MONDO:0021079"},{"relation_name":"is_a","term_name":"spinal cord neoplasm","termid":"MONDO:0021234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood spinal cord tumor","secondary_identifiers":["MEDGEN:209512","NCIT:C9234","DOID:3637","UMLS:C1134515"],"synonyms":[{"name":"childhood spinal cord neoplasm","type":"exact"},{"name":"paediatric spinal cord neoplasm","type":"exact"},{"name":"pediatric spinal cord neoplasm","type":"exact"},{"name":"spinal cord neoplasm of childhood","type":"exact"}],"termid":"MONDO:0002716","xrefs":{"Monarch":{"xref_id":"0002716"}}}


id: PBO:0076358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin like 5","termid":"PBO:0076358"}


id: PBO:0063870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIGB opposite strand 1","termid":"PBO:0063870"}


id: GO:0150068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of tubulin deacetylase activity.","definition_xrefs":["GOC:aruk","GOC:bc"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of tubulin deacetylase activity (obsolete GO:0150068)","termid":"GO:0150068"}


id: PBO:0056928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermediate peptidase","termid":"PBO:0056928"}


id: PBO:0071265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23 pseudogene 10","termid":"PBO:0071265"}


id: SO:0001391
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified glutamic acid.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_glutamic_acid","secondary_identifiers":["MOD:00906"],"synonyms":[{"name":"ModGlu","type":"exact"},{"name":"modified L glutamic acid","type":"exact"},{"name":"modified L-glutamic acid","type":"exact"}],"termid":"SO:0001391"}


id: MONDO:0005413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cystic fibrosis associated meconium ileum is a thickening and congestion of the meconium in the ileum in newborns, often the first sign of cystic fibrosis. In cystic fibrosis, the meconium can form a bituminous black-green mechanical obstruction in a segment of the ileum. Beyond this there may be a few separate grey-white globular pellets. Below this level, the bowel is a narrow and empty micro-colon. Above the level of the obstruction, there are several loops of hypertrophied bowel distended with fluid. No meconium is passed, and abdominal distension and vomiting appear soon after birth. About 20% of cases of cystic fibrosis present with meconium ileus, while approximately 20% of one series of cases of meconium ileus did not have cystic fibrosis. The presence of meconium ileus is not related to the severity of the cystic fibrosis.","definition_xrefs":["EFO:0004608"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cystic fibrosis","termid":"MONDO:0009061"},{"relation_name":"is_a","term_name":"meconium ileus","termid":"MONDO:0054868"},{"relation_name":"is_a","term_name":"perinatal disease","termid":"MONDO:0100086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"cystic fibrosis associated meconium ileus","secondary_identifiers":["MEDGEN:639765","UMLS:C0546982"],"synonyms":[{"name":"cystic fibrosis associated meconium ileum","type":"exact"}],"termid":"MONDO:0005413","xrefs":{"Monarch":{"xref_id":"0005413"}}}


id: MONDO:0004826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A concretion in the urethra.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urethral disorder","termid":"MONDO:0004184"},{"relation_name":"is_a","term_name":"lower urinary tract calculus","termid":"MONDO:0004828"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urethral calculus","secondary_identifiers":["SCTID:20342001","DOID:9589","ICD9:594.2","UMLS:C0162301","MEDGEN:57664"],"synonyms":[{"name":"urethra urolithiasis","type":"exact"},{"name":"urethral Stone","type":"exact"},{"name":"urolithiasis of urethra","type":"exact"}],"termid":"MONDO:0004826","xrefs":{"Monarch":{"xref_id":"0004826"}}}


id: PBO:0108607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER to Golgi ceramide transport protein, lipocalin superfamily Svf1","termid":"PBO:0108607"}


id: PBO:0109033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MESD pseudogene 1","termid":"PBO:0109033"}


id: MONDO:0015401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Maxillary arteriovenous malformation is a rare vascular anomaly characterized by an abnormal connection of the arterial and venous vasculature, without capillary connections, in the maxillofacial area, usually presenting with chronic, intermittent, and potentially life-threatening, hemorrhage. Association with infection, pain, pressure, pulsation, swelling, facial asymmetry, headache, ocular pain, tinnitus, otalgia, epistaxis, toothache and/or teeth mobility and compressibility into their sockets is possible, although it may also be asymptomatic.","definition_xrefs":["Orphanet:141171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facial arteriovenous malformation","termid":"MONDO:0015500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maxillary arteriovenous malformation","secondary_identifiers":["MEDGEN:825655","SCTID:703335004","UMLS:C3839810","GARD:19956","icd11.foundation:1755286955"],"synonyms":[{"name":"arteriovenous malformation of maxilla","type":"exact"}],"termid":"MONDO:0015401","xrefs":{"Monarch":{"xref_id":"0015401"}}}


id: GO:0008252
data:
  {"annotated_genes":["SJAG_02959","SJAG_03096","SJAG_02593","SJAG_02580","SJAG_01702","SJAG_02582","SJAG_01055"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008441"},{"annotations":[93843,113203,113202,87063,87064,90028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008253"},{"annotations":[116675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050484"},{"annotations":[107995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050483"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a nucleotide + H2O = a nucleoside + phosphate.","definition_xrefs":["RHEA:22140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01055":null,"SJAG_01702":null,"SJAG_02580":null,"SJAG_02582":null,"SJAG_02593":null,"SJAG_02959":null,"SJAG_03096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"nucleotidase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NSP I","type":"related"},{"name":"NSP II","type":"related"},{"name":"acid nucleotidase activity","type":"related"},{"name":"deoxyinosine-activated nucleotidase (DIAN)","type":"related"},{"name":"deoxyribonucleoside-activated nucleotidase (DAN)","type":"related"},{"name":"nucleotide phosphohydrolase activity","type":"related"},{"name":"nucleotide-specific phosphatase activity","type":"related"}],"termid":"GO:0008252","terms_by_termid":{"GO:0008253":null,"GO:0008441":null,"GO:0050483":null,"GO:0050484":null}}


id: PR:Q9URW7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URW7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPJ696.01c","synonyms":[{"name":"Spom972h-vps17","type":"exact"}],"termid":"PR:Q9URW7"}


id: PBO:0043299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 18 member A","termid":"PBO:0043299"}


id: PBO:0091360
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complented by human HRAS","termid":"PBO:0091360"}


id: PBO:0063498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ and LIM domain 7","termid":"PBO:0063498"}


id: MONDO:0014561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"3-methylglutaconic aciduria","termid":"MONDO:0017359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"3-methylglutaconic aciduria, type VIIB","secondary_identifiers":["DOID:0110003","MEDGEN:1810214","Orphanet:445038","GARD:17767","UMLS:C5676893","SCTID:764860006","DOID:0081134","OMIM:616271"],"synonyms":[{"name":"3-METHYLGLUTACONIC aciduria with cataracts, neurologic involvement, and neutropenia","type":"related"},{"name":"3-Methylglutaconic aciduria, type 7","type":"related"},{"name":"3-methylglutaconic aciduria type 7","type":"exact"},{"name":"3-methylglutaconic aciduria type VII","type":"exact"},{"name":"3-methylglutaconic aciduria with cataracts, neurologic involvement and neutropenia","type":"exact"},{"name":"3-methylglutaconic aciduria, type VII, with cataracts, neurologic involvement and neutropenia","type":"exact"},{"name":"3-methylglutaconic aciduria-cataract-neurologic involvement-neutropenia syndrome","type":"exact"},{"name":"CLPB 3-methylglutaconic aciduria","type":"exact"},{"name":"MEGCANN","type":"exact"},{"name":"MGA7","type":"exact"},{"name":"MGCA7","type":"exact"}],"termid":"MONDO:0014561","xrefs":{"Monarch":{"xref_id":"0014561"}}}


id: PATO:0001690
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A contractility quality inhering in a bearer by virtue of the bearer's ability of contracting or being contracted.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"contractility","termid":"PATO:0001579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contractile","termid":"PATO:0001690"}


id: PBO:0083047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deoxyuridine triphosphate diphosphatase (dUTPase); catalyzes hydrolysis of dUTP to dUMP and PPi, thereby preventing incorporation of uracil into DNA during replication; critical for the maintenance of genetic stability; also has diphosphatase activity on deoxyinosine triphosphate; human homolog DUT allows growth of yeast haploid dut1 null mutant after sporulation of heterozygous diploid","termid":"PBO:0083047"}


id: GO:0016671
data:
  {"annotated_genes":["SJAG_00419","SJAG_00365","SJAG_04060"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036456"},{"annotations":[106096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033743"},{"annotations":[95053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008113"},{"annotations":[88249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004604"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces disulfide.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00365":null,"SJAG_00419":null,"SJAG_04060":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.8.4.-"],"synonyms":[{"name":"oxidoreductase activity, acting on sulphur group of donors, disulphide as acceptor","type":"exact"}],"termid":"GO:0016671","terms_by_termid":{"GO:0004604":null,"GO:0008113":null,"GO:0033743":null,"GO:0036456":null}}


id: MONDO:0007223
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any brachydactyly type E in which the cause of the disease is a mutation in the HOXD13 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brachydactyly type E","termid":"MONDO:0019677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly type E1","secondary_identifiers":["MEDGEN:396291","OMIM:113300","UMLS:C1862102","DOID:0110972","MESH:C566194"],"synonyms":[{"name":"BDE1","type":"exact"},{"name":"HOXD13 brachydactyly type E","type":"exact"},{"name":"brachydactyly type E caused by mutation in HOXD13","type":"exact"},{"name":"brachydactyly, type E","type":"related"},{"name":"brachydactyly, type E1","type":"related"}],"termid":"MONDO:0007223","xrefs":{"Monarch":{"xref_id":"0007223"}}}


id: FYPO:0000882
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 9 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000787"},{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone H3-K9 trimethylation during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 trimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 trimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me3 during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 trimethylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 trimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000882"}


id: PBO:0074621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 20B","termid":"PBO:0074621"}


id: PBO:0056991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 33a","termid":"PBO:0056991"}


id: GO:0045684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epidermis development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epidermis development","termid":"GO:0045682"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"positively_regulates","term_name":"epidermis development","termid":"GO:0008544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epidermis development","synonyms":[{"name":"activation of epidermis development","type":"narrow"},{"name":"positive regulation of epidermal development","type":"exact"},{"name":"positive regulation of hypodermis development","type":"related"},{"name":"stimulation of epidermis development","type":"narrow"},{"name":"up regulation of epidermis development","type":"exact"},{"name":"up-regulation of epidermis development","type":"exact"},{"name":"upregulation of epidermis development","type":"exact"}],"termid":"GO:0045684"}


id: PR:Q9P7U1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC977.15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7U1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized AIM2 family protein C977.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC977.15","synonyms":[{"name":"Spom972h-SPAC977.15","type":"exact"}],"termid":"PR:Q9P7U1"}


id: PATO:0002268
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being located in a position equidistant from edges.","definition_xrefs":["PATOC:OREGON"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centered","termid":"PATO:0002268"}


id: MONDO:0019569
data:
  {"annotated_genes":["SJAG_04540"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85526],"is_not":false,"summary":null,"term":"MONDO:0019569"}]},"cv_name":"mondo","definition":"Cockayne syndrome caused by mutation(s) in the ERCC8 gene, encoding DNA excision repair protein ERCC-8.","definition_xrefs":["NCIT:C135725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cockayne syndrome","termid":"MONDO:0016006"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0021190","MONDO:0006025","MONDO:0019303","MONDO:0005066"],"is_obsolete":false,"name":"Cockayne syndrome type 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:1415","icd11.foundation:1271368066","MEDGEN:155488","Orphanet:90321","OMIM:216400","UMLS:C0751039","DOID:0080907"],"synonyms":[{"name":"CSA","type":"related"},{"name":"Cockayne syndrome A","type":"exact"},{"name":"Cockayne syndrome caused by mutation in ERCC8","type":"exact"},{"name":"Cockayne syndrome classic form","type":"related"},{"name":"Cockayne syndrome classical","type":"related"},{"name":"Cockayne syndrome type 1","type":"exact"},{"name":"Cockayne syndrome type A","type":"related"},{"name":"Cockayne syndrome type I","type":"exact"},{"name":"Cockayne syndrome type a","type":"exact"},{"name":"Cockayne syndrome, type A","type":"exact"},{"name":"ERCC8 Cockayne syndrome","type":"exact"}],"termid":"MONDO:0019569","terms_by_termid":{"MONDO:0019569":null},"xrefs":{"Monarch":{"xref_id":"0019569"}}}


id: GO:0072334
data:
  {"annotated_genes":["SJAG_04697","SJAG_01177","SJAG_04162"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111862,115064],"is_not":false,"summary":null,"term":"GO:0072334"},{"annotations":[87843,115063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097624"}]},"cv_name":"biological_process","definition":"The process in which UDP-galactose is transported across a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transport","termid":"GO:0090481"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01177":null,"SJAG_04162":null,"SJAG_04697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"UDP-galactose transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015785"],"synonyms":[{"name":"UDP-galactose membrane transport","type":"exact"},{"name":"UDP-galactose transport","type":"related"}],"termid":"GO:0072334","terms_by_termid":{"GO:0072334":null,"GO:0097624":null}}


id: PBO:0066042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP1A, member of RAS oncogene family pseudogene","termid":"PBO:0066042"}


id: FYPO:0000504
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the occurrence of necrotic cell death is decreased. Necrotic cell death is morphologically characterized by a gain in cell volume (oncosis), swelling of organelles, plasma membrane rupture and subsequent loss of intracellular contents.","definition_xrefs":["PomBase:mah","GO:0070265"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased necrotic cell death (obsolete FYPO:0000504)","synonyms":[{"name":"necrotic cell death: decreased","type":"related"},{"name":"reduced necrotic cell death","type":"exact"}],"termid":"FYPO:0000504"}


id: MONDO:0859578
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"LADD syndrome","termid":"MONDO:0007872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"lacrimoauriculodentodigital syndrome 3","secondary_identifiers":["DOID:0081372","UMLS:C5774287","MEDGEN:1824060","OMIM:620193"],"termid":"MONDO:0859578","xrefs":{"Monarch":{"xref_id":"0859578"}}}


id: MONDO:0035354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete IgG4-related systemic disease (obsolete MONDO:0035354)","termid":"MONDO:0035354","xrefs":{"Monarch":{"xref_id":"0035354"}}}


id: GO:0048513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.","definition_xrefs":["GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"animal organ development","secondary_identifiers":["Wikipedia:Organogenesis"],"synonyms":[{"name":"development of an organ","type":"exact"},{"name":"organogenesis","type":"exact"}],"termid":"GO:0048513"}


id: GO:0043867
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tRNA guanine + 7-cyano-7-deazaguanine = tRNA 7-cyano-7-deazaguanine + guanine.","definition_xrefs":["PMID:7748953","PMID:16407303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"7-cyano-7-deazaguanine tRNA-ribosyltransferase activity","synonyms":[{"name":"TgtA","type":"related"},{"name":"archaeal tRNA-guanine transglycosylase activity","type":"exact"},{"name":"archaeosine tRNA-ribosyltransferase activity","type":"exact"}],"termid":"GO:0043867"}


id: PBO:0000282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sad1 interacting factor 3 (predicted)","termid":"PBO:0000282"}


id: GO:0001208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of a H2A-H2B histone dimer from a nucleosome within chromatin.","definition_xrefs":["PMID:15525516","GOC:krc","PMID:17496903","PMID:21807128"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A-H2B dimer displacement (obsolete GO:0001208)","termid":"GO:0001208"}


id: MONDO:0008011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antigen defined by monoclonal antibody T87","secondary_identifiers":["UMLS:C1834756","MEDGEN:331821","OMIM:158040"],"synonyms":[{"name":"Msk2","type":"related"},{"name":"antigen defined by monoclonal antibody T87","type":"exact"}],"termid":"MONDO:0008011","xrefs":{"Monarch":{"xref_id":"0008011"}}}


id: PBO:0039282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 like 11, pseudogene","termid":"PBO:0039282"}


id: MONDO:0003920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gastric small cell carcinoma (obsolete MONDO:0003920)","termid":"MONDO:0003920","xrefs":{"Monarch":{"xref_id":"0003920"}}}


id: PBO:0031686
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_peroxisomal_transport","termid":"PBO:0031686"}


id: MONDO:8000023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, primary immunodeficiency. It is caused by a currently undetermined defect in the Fas-induced apoptosis pathway. No mutations in Fas, FASLG or CASP10 are detectable. Disruption of Fas-induced apoptosis impairs lymphocyte homeostasis and immune tolerance. Characteristic laboratory findings include an increase in circulating, double-negative (CD4-/CD8-) T cells in the setting of immune-mediated anemia, thrombocytopenia and neutropenia. Clinical signs present in childhood include fatigue, pallor, bruising, hepatosplenomegaly and chronic, non-malignant, non-infectious lymphadenopathy. The clinical course is influenced by a strong association with other autoimmune disorders and an increased risk for developing Hodgkin and non-Hodgkin lymphoma.","definition_xrefs":["NCIT:C39577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune lymphoproliferative syndrome","termid":"MONDO:0017979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"type 3 autoimmune lymphoproliferative syndrome","secondary_identifiers":["MEDGEN:274327","UMLS:C1519711"],"termid":"MONDO:8000023","xrefs":{"Monarch":{"xref_id":"8000023"}}}


id: FYPO:0008145
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of  heme O measured in a cell is lower than normal.","definition_xrefs":["PMID:11248251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell","termid":"FYPO:0000991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased level of heme O in cell","synonyms":[{"name":"decreased heme O level","type":"exact"}],"termid":"FYPO:0008145"}


id: GO:1990476
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synaptic vesicle belonging to the pool that remain unreleased even after prolonged stimulation causes a saturating degree of vesicular turnover. 50-80% of the total number of synaptic vesicles at a resting terminal bouton are in this pool.","definition_xrefs":["GOC:pad","PMID:22745285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic vesicle","termid":"GO:0008021"},{"relation_name":"part_of","term_name":"terminal bouton","termid":"GO:0043195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"synaptic vesicle, resting pool","synonyms":[{"name":"reserve pool of synaptic vesicles","type":"exact"},{"name":"resting pool of synaptic vesicles","type":"exact"}],"termid":"GO:1990476"}


id: PBO:0074320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD9 intronic transcript 1","termid":"PBO:0074320"}


id: MONDO:0009449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia with defective radial spokes","secondary_identifiers":["OMIM:242670","UMLS:C0340035","SCTID:233664005","GARD:2981","ICD9:759.89","MEDGEN:137933","MESH:C536286"],"synonyms":[{"name":"cilia with defective radial spokes","type":"related"},{"name":"ciliary dyskinesia with defective radial spokes","type":"exact"},{"name":"immotile cilia syndrome due to defective radial spokes","type":"related"},{"name":"immotile cilia syndrome, due to defective radial spokes","type":"related"}],"termid":"MONDO:0009449","xrefs":{"Monarch":{"xref_id":"0009449"}}}


id: GO:0050986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of an isopeptide cross-link between peptidyl-glutamate and peptidyl-glycine to produce N-(L-isoglutamyl)-glycine, as found in the antibiotic microcin J25.","definition_xrefs":["PMID:14531691","RESID:AA0360"],"gene_count":0,"genotype_count":0,"name":"obsolete isopeptide cross-linking via N-(L-isoglutamyl)-glycine (obsolete GO:0050986)","termid":"GO:0050986"}


id: MONDO:0017693
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glycogen storage disease due to glycogen synthase deficiency (obsolete MONDO:0017693)","secondary_identifiers":["NANDO:1200824","Orphanet:308520"],"synonyms":[{"name":"GSD due to glycogen synthase deficiency","type":"exact"},{"name":"GSD0","type":"exact"},{"name":"glycogen storage disease type 0","type":"exact"},{"name":"glycogenosis due to glycogen synthase deficiency","type":"exact"}],"termid":"MONDO:0017693","xrefs":{"Monarch":{"xref_id":"0017693"}}}


id: PBO:0087718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; required for glucose repression, HO repression, RME1 repression and sporulation","termid":"PBO:0087718"}


id: GO:0046817
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacts with chemokine receptors to reduce the action of a chemokine.","definition_xrefs":["GOC:ai","ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor antagonist activity","termid":"GO:0048019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0140678","GO:0005515","GO:0005488","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"chemokine receptor antagonist activity","termid":"GO:0046817"}


id: PBO:0002513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroorotase Ura2 (predicted)","termid":"PBO:0002513"}


id: FYPO:0004349
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to methylglyoxal is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during cellular response to methylglyoxal","synonyms":[{"name":"decreased RNA accumulation during cellular response to methylglyoxal","type":"related"},{"name":"decreased RNA level during cellular response to methylglyoxal during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to methylglyoxal during vegetative growth","type":"exact"},{"name":"decreased transcript level during cellular response to methylglyoxal","type":"exact"},{"name":"reduced RNA level during cellular response to methylglyoxal","type":"exact"}],"termid":"FYPO:0004349"}


id: GO:0061609
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-fructose-1-phosphate = D-glyceraldehyde + dihydroxyacetone phosphate.","definition_xrefs":["GOC:dph","RHEA:30851","GOC:glycolysis","ISBN:0201090910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"fructose-1-phosphate aldolase activity","secondary_identifiers":["Reactome:R-HSA-70342","MetaCyc:RXN-8631","Reactome:R-HSA-5656438"],"termid":"GO:0061609"}


id: PBO:0080657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 1","termid":"PBO:0080657"}


id: MONDO:0004585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An excess quantity of amniotic fluid in the amniotic sac as compared to normal values. Typically associated with an amniotic fluid index (AFI) of greater than or equal to 25 cm or a single maximum vertical pocket (MVP) of greater than 8 cm.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"placenta disorder","termid":"MONDO:0005917"},{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyhydramnios","secondary_identifiers":["HP:0001561","ICD9:657","SCTID:86203003","UMLS:C0020224","DOID:8488","MEDGEN:6936","ICD9:657.00","MESH:D006831","ICD9:657.0"],"synonyms":[{"name":"polyhydramnios","type":"exact"},{"name":"polyhydramnios (disease)","type":"exact"}],"termid":"MONDO:0004585","xrefs":{"Monarch":{"xref_id":"0004585"}}}


id: GO:0019071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cleavage of viral DNA into singular functional units.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete viral DNA cleavage involved in viral genome maturation (obsolete GO:0019071)","termid":"GO:0019071"}


id: PBO:0091191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val","termid":"PBO:0091191"}


id: MONDO:0000111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"camptodactyly syndrome, Guadalajara","termid":"MONDO:0000111","xrefs":{"Monarch":{"xref_id":"0000111"}}}


id: GO:0060276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The homeostatic process in which a population of cells changes its metabolic activity resulting in the rate of death in the population equaling the rate of reproduction in response to a build-up of toxins in the environment.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of stationary phase","termid":"GO:0060274"},{"relation_name":"part_of","term_name":"response to toxic substance","termid":"GO:0009636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of stationary phase in response to toxin","termid":"GO:0060276"}


id: MONDO:0016023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ocular coloboma (obsolete MONDO:0016023)","termid":"MONDO:0016023","xrefs":{"Monarch":{"xref_id":"0016023"}}}


id: PBO:0029538
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_spores,_germinated_spores_and_tapered_cells_(obsolete_FYPO:0002184)","termid":"PBO:0029538"}


id: GO:0006925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in an inflammatory cell, any cell participating in the inflammatory response to a foreign substance e.g. neutrophil, macrophage.","definition_xrefs":["GOC:mtg_apoptosis","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inflammatory cell apoptotic process","secondary_identifiers":["Reactome:R-HSA-168277"],"synonyms":[{"name":"apoptosis of inflammatory cells","type":"exact"},{"name":"inflammatory cell apoptosis","type":"narrow"},{"name":"inflammatory cell programmed cell death by apoptosis","type":"exact"},{"name":"killing of inflammatory cells","type":"exact"},{"name":"programmed cell death of inflammatory cells by apoptosis","type":"exact"},{"name":"programmed cell death, inflammatory cells","type":"exact"}],"termid":"GO:0006925"}


id: GO:0070592
data:
  {"annotated_genes":["SJAG_04483","SJAG_02916","SJAG_01028","SJAG_03123","SJAG_01453","SJAG_04666","SJAG_04659","SJAG_04771","SJAG_01787","SJAG_00610","SJAG_03705","SJAG_01288","SJAG_04462","SJAG_03587","SJAG_04668","SJAG_01255","SJAG_00424","SJAG_02278","SJAG_04236","SJAG_00876","SJAG_01835","SJAG_04184","SJAG_01290","SJAG_00218","SJAG_05285","SJAG_03057","SJAG_02222"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[108790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[108562,88622,103673,113874,117291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[105592,91068,91079,87544,107264,115316,112657,108792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[102143,108101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[105594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051278"},{"annotations":[86996,91904],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[117533,117408,90251,91906,102346,105406,104837,91888],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"},{"annotations":[88916,91910,94422,102348],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a polysaccharide destined to form part of a cell wall.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"cell wall polysaccharide metabolic process","termid":"GO:0010383"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01028":null,"SJAG_01255":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_02278":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0071554"],"is_obsolete":false,"name":"cell wall polysaccharide biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell wall polysaccharide anabolism","type":"exact"},{"name":"cell wall polysaccharide biosynthesis","type":"exact"},{"name":"cell wall polysaccharide synthesis","type":"exact"}],"termid":"GO:0070592","terms_by_termid":{"GO:0034412":null,"GO:0034413":null,"GO:0051278":null,"GO:0070600":null,"GO:0070610":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: MONDO:0007712
data:
  {"annotated_genes":["SJAG_00539","SJAG_00322"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85214,85215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958175"}]},"cv_name":"mondo","definition":"Oculoauriculovertebral spectrum (OAVS) with radial defects is a rare branchial arches and limb primordia development disorder characterized by variable degrees of uni- or bilateral craniofacial malformation and radial defects that result in extremely variable phenotypic manifestations. Characteristic features include low postnatal weight, short stature, vertebral defects, hearing loss, and facial dysmorphism (incl. facial asymmetry, external, middle, and inner ear malformations, orofacial clefts, and mandibular hypoplasia). These features are invariably associated with radial defects, such as preaxial polydactyly, thumb and/or radius hypoplasia/agenesis, or triphalangeal thumb. Cardiac, pulmonary, renal, and central nervous system involvement has also been reported.","definition_xrefs":["Orphanet:2549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00322":null,"SJAG_00539":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"oculoauriculovertebral spectrum with radial defects","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0220681","GARD:3653","MEDGEN:67392","SCTID:726722009","OMIM:141400"],"synonyms":[{"name":"Goldenhar syndrome with ipsilateral radial defect","type":"related"},{"name":"Moeschler Clarren syndrome","type":"related"},{"name":"Moeschler-Clarren syndrome","type":"exact"},{"name":"Oavs with radial defect","type":"related"},{"name":"hemifacial microsomia with radial defects","type":"related"},{"name":"hemifacial microsomia-radial defects syndrome","type":"exact"},{"name":"microsomia hemifacial radial defects","type":"related"},{"name":"oculoauriculovertebral spectrum with radial defect","type":"related"}],"termid":"MONDO:0007712","terms_by_termid":{"MONDO:0958175":null},"xrefs":{"Monarch":{"xref_id":"0007712"}}}


id: GO:0018332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient adenylylation of threonine to form N6-(phospho-5'-adenosine)-L-threonine, found in the active site of bovine phosphodiesterase I.","definition_xrefs":["RESID:AA0267"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via O-(phospho-5'-adenosine)-L-threonine (obsolete GO:0018332)","termid":"GO:0018332"}


id: PBO:0074372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-pass membrane protein with aspartate rich tail 1","termid":"PBO:0074372"}


id: GO:0052328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the symbiont organism mediated by a substance secreted by the other organism by a type III secretion system. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with symbiont via protein secreted by type III secretion system (obsolete GO:0052328)","synonyms":[{"name":"interaction with symbiont via protein secreted by type III secretion system","type":"exact"}],"termid":"GO:0052328"}


id: MONDO:0004271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tubular type adenoma of the breast in which, during pregnancy and lactation, the epithelial cells show extensive secretory changes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast adenoma","termid":"MONDO:0002058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy adenoma","secondary_identifiers":["DOID:7539","NCIT:C9473","ICDO:8204/0","MEDGEN:226830","UMLS:C1266023"],"synonyms":[{"name":"Lactating adenoma","type":"exact"},{"name":"Lactating adenoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0004271","xrefs":{"Monarch":{"xref_id":"0004271"}}}


id: PBO:0049627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 30","termid":"PBO:0049627"}


id: PBO:0069833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1119, pseudogene","termid":"PBO:0069833"}


id: MONDO:0001548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by central nervous system dysfunction in association with liver failure, including portal-systemic shunts. Clinical features include lethargy and confusion (frequently progressing to coma); asterixis; nystagmus, pathologic; brisk oculovestibular reflexes; decorticate and decerebrate posturing; muscle spasticity; and bilateral extensor plantar reflexes (see reflex, babinski). electroencephalography may demonstrate triphasic waves. (From Adams et al., Principles of Neurology, 6th ed, pp1117-20; Plum & Posner, Diagnosis of Stupor and Coma, 3rd ed, p222-5)","definition_xrefs":["MESH:D006501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatic encephalopathy","termid":"MONDO:0001711"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatic coma","secondary_identifiers":["MEDGEN:6803","UMLS:C0019147","ICD9:070.42","DOID:12550","SCTID:72836002"],"synonyms":[{"name":"hepatocerebral intoxication","type":"exact"}],"termid":"MONDO:0001548","xrefs":{"Monarch":{"xref_id":"0001548"}}}


id: GO:0002398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an MHC class Ib protein complex. Class Ib here refers to non-classical class I molecules.","definition_xrefs":["PMID:15928678","PMID:15928680","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein complex assembly","termid":"GO:0002396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"MHC class Ib protein complex assembly","termid":"GO:0002398"}


id: PBO:0026738
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_positive_regulation_of_DNA-directed_DNA_polymerase_activity","termid":"PBO:0026738"}


id: PR:O14210
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ies2 gene.","definition_xrefs":["UniProtKB:O14210","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.05c","synonyms":[{"name":"Spom972h-ies2","type":"exact"}],"termid":"PR:O14210"}


id: MONDO:0032808
data:
  {"annotated_genes":["SJAG_03066"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86468],"is_not":false,"summary":null,"term":"MONDO:0032808"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"disorder of GPI anchor biosynthesis","termid":"MONDO:0024321"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"},{"relation_name":"is_a","term_name":"multiple congenital anomalies-hypotonia-seizures syndrome","termid":"MONDO:0100247"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03066":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0002320","MONDO:0700092","MONDO:0002525","MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 77","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112213","UMLS:C5231405","MEDGEN:1684735","OMIM:618548","GARD:16363"],"synonyms":[{"name":"DEE77","type":"exact"},{"name":"EIEE77","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 77","type":"exact"},{"name":"glycosylphosphatidylinositol biosynthesis defect 19","type":"related"},{"name":"multiple congenital anomalies-hypotonia-seizures syndrome 4","type":"exact"}],"termid":"MONDO:0032808","terms_by_termid":{"MONDO:0032808":null},"xrefs":{"Monarch":{"xref_id":"0032808"}}}


id: PBO:0030203
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_elongated_multinucleate_vegetative_cell","termid":"PBO:0030203"}


id: GO:0071162
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the GINS complex, Cdc45p, and the heterohexameric MCM complex, and that is involved in unwinding DNA during replication.","definition_xrefs":["GOC:rb","PMID:19228417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication preinitiation complex","termid":"GO:0031261"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0032991","GO:0005654","GO:0005575","GO:0005634","GO:0005694"],"is_obsolete":false,"name":"CMG complex","synonyms":[{"name":"unwindosome","type":"exact"}],"termid":"GO:0071162"}


id: FYPO:0002802
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a cell has a nucleus in an abnormal location at the cell cortex when the cell is subject to nitrogen starvation. The normal location is at the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized nucleus","termid":"FYPO:0002069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"nucleus mislocalized to cell cortex during nitrogen starvation","synonyms":[{"name":"nuclear displacement to cell cortex during nitrogen starvation","type":"exact"},{"name":"nucleus displaced to cell cortex during nitrogen starvation","type":"exact"},{"name":"nucleus mislocalised to cell cortex during nitrogen starvation","type":"exact"},{"name":"nucleus mislocalized to cell cortex during nitrogen depletion","type":"exact"},{"name":"nucleus mislocalized to cell cortex during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0002802"}


id: PBO:0060204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin like 3","termid":"PBO:0060204"}


id: PBO:0044624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"doublecortin domain containing 2B","termid":"PBO:0044624"}


id: MONDO:0026141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic urticaria (obsolete MONDO:0026141)","secondary_identifiers":["Orphanet:182734"],"termid":"MONDO:0026141","xrefs":{"Monarch":{"xref_id":"0026141"}}}


id: GO:0046626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of insulin receptor signaling.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"insulin receptor signaling pathway","termid":"GO:0008286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of insulin receptor signaling pathway","synonyms":[{"name":"regulation of insulin receptor signalling pathway","type":"exact"}],"termid":"GO:0046626"}


id: GO:0060982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of coronary arteries are generated and organized. Coronary arteries are blood vessels that transport blood to the heart muscle.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"artery morphogenesis","termid":"GO:0048844"},{"relation_name":"is_a","term_name":"coronary vasculature morphogenesis","termid":"GO:0060977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"coronary artery morphogenesis","termid":"GO:0060982"}


id: PBO:0116303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Repressor of G1 transcription; binds to SCB binding factor (SBF) at SCB target promoters in early G1; phosphorylation of Whi5p by G1 cyclin (Cln)/Cdc28p relieves repression and promoter binding by Whi5p, drives nuclear export, and contributes to both the determination of critical cell size at START and cell fate; dephosphorylated and re-imported into the nucleus post-START during the starvation response, reversing commitment; expression is repressed in M/early G phase; analogous to metazoan Rb","termid":"PBO:0116303"}


id: GO:0033973
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dCTP + 2 H2O = diphosphate + dUMP + H+ + NH4.","definition_xrefs":["EC:3.5.4.30","RHEA:19205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"dCTP deaminase (dUMP-forming) activity","secondary_identifiers":["MetaCyc:3.5.4.30-RXN","KEGG_REACTION:R07307"],"synonyms":[{"name":"dCTP aminohydrolase (dUMP-forming) activity","type":"related"}],"termid":"GO:0033973"}


id: PBO:0018061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylthioribose-1-phosphate isomerase Mri1 (predicted)","termid":"PBO:0018061"}


id: MONDO:0015311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the presence of a unilateral angioma on the face and autistic developmental problems characterized by language delay and atypical social interactions.","definition_xrefs":["Orphanet:137911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism-facial port-wine stain syndrome","secondary_identifiers":["GARD:10303"],"synonyms":[{"name":"autism with port-wine stain","type":"related"}],"termid":"MONDO:0015311","xrefs":{"Monarch":{"xref_id":"0015311"}}}


id: GO:0046228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2,4,5-trichlorophenoxyacetic acid, a chlorinated aromatic compound widely used as a herbicide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2,4,5-trichlorophenoxyacetic acid metabolic process","termid":"GO:0018980"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"2,4,5-trichlorophenoxyacetic acid catabolic process","synonyms":[{"name":"2,4,5-trichlorophenoxyacetic acid breakdown","type":"exact"},{"name":"2,4,5-trichlorophenoxyacetic acid catabolism","type":"exact"},{"name":"2,4,5-trichlorophenoxyacetic acid degradation","type":"exact"}],"termid":"GO:0046228"}


id: PBO:0081489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 385A","termid":"PBO:0081489"}


id: MONDO:0009441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive congenital ichthyosis in which the cause of the disease is a mutation in the TGM1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive congenital ichthyosis","termid":"MONDO:0017265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"autosomal recessive congenital ichthyosis 1","secondary_identifiers":["DOID:0060656","GARD:3170","MESH:D017490","MEDGEN:1635401","OMIM:242300","UMLS:C4551630"],"synonyms":[{"name":"ARCI1","type":"exact"},{"name":"LI1","type":"related"},{"name":"autosomal recessive congenital ichthyosis 1","type":"exact"},{"name":"autosomal recessive congenital ichthyosis type 1","type":"exact"},{"name":"bathing suit ichthyosis","type":"narrow"},{"name":"collodion baby, self-healing","type":"related"},{"name":"collodion fetus","type":"related"},{"name":"collodion foetus","type":"related"},{"name":"desquamation of newborn","type":"related"},{"name":"ichthyosis congenita","type":"related"},{"name":"ichthyosis congenita 2","type":"related"},{"name":"ichthyosis lamellar 1","type":"related"},{"name":"ichthyosis, congenital, autosomal recessive 1","type":"related"},{"name":"ichthyosis, congenital, autosomal recessive 1, with bathing suit distribution","type":"related"},{"name":"ichthyosis, congenital, autosomal recessive type 1","type":"exact"},{"name":"ichthyosis, lamellar, 1","type":"related"},{"name":"ichthyosis, lamellar, 1, formerly","type":"related"},{"name":"lamellar exfoliation of newborn","type":"related"},{"name":"lamellar ichthyosis, type 1","type":"related"}],"termid":"MONDO:0009441","xrefs":{"Monarch":{"xref_id":"0009441"}}}


id: PBO:0088315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RQC complex ubiquitin-protein ligase E3 Rkr1","termid":"PBO:0088315"}


id: GO:0042420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dopamine metabolic process","termid":"GO:0042417"},{"relation_name":"is_a","term_name":"catecholamine catabolic process","termid":"GO:0042424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dopamine catabolic process","secondary_identifiers":["Reactome:R-HSA-379398","Reactome:R-HSA-379397"],"synonyms":[{"name":"dopamine breakdown","type":"exact"},{"name":"dopamine catabolism","type":"exact"},{"name":"dopamine degradation","type":"exact"}],"termid":"GO:0042420"}


id: PBO:0055769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA PDCD5 and p53 scaffold","termid":"PBO:0055769"}


id: FYPO:0006582
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity","termid":"FYPO:0004644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity","synonyms":[{"name":"reduced bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity","type":"exact"}],"termid":"FYPO:0006582"}


id: PATO:0000754
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000754 startle response (obsolete PATO:0000754)","termid":"PATO:0000754"}


id: GO:0020026
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Electron-dense organelle with a granular internal matrix found throughout the merozoite life cycle stage of apicomplexan parasites; contains proteins destined to be secreted into the parasitophorous vacuole following parasite invasion of a host cell.","definition_xrefs":["GOC:mb","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"merozoite dense granule","synonyms":[{"name":"dense body","type":"related"}],"termid":"GO:0020026"}


id: GO:0070498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-1 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah","GOC:signaling","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-1","termid":"GO:0071347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-1-mediated signaling pathway","secondary_identifiers":["Reactome:R-HSA-9020702"],"synonyms":[{"name":"IL-1 alpha-mediated signaling pathway","type":"narrow"},{"name":"IL-1 beta-mediated signaling pathway","type":"narrow"},{"name":"IL-1-mediated signaling pathway","type":"exact"},{"name":"interleukin-1 alpha-mediated signaling pathway","type":"narrow"},{"name":"interleukin-1 beta-mediated signaling pathway","type":"narrow"},{"name":"interleukin-1-mediated signalling pathway","type":"exact"}],"termid":"GO:0070498"}


id: GO:1902703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of hexose to butan-1-ol.","definition_xrefs":["GOC:mengo_curators","PMID:19539744","PMID:18727018","GO_REF:0000093","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete hexose catabolic process to butan-1-ol (obsolete GO:1902703)","synonyms":[{"name":"hexose breakdown to butan-1-ol","type":"exact"},{"name":"hexose catabolic process to 1-butanol","type":"exact"},{"name":"hexose catabolic process to butanol","type":"exact"},{"name":"hexose catabolism to butan-1-ol","type":"exact"},{"name":"hexose degradation to butan-1-ol","type":"exact"},{"name":"solventogenesis","type":"broad"}],"termid":"GO:1902703"}


id: PATO:0001868
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fluorescence quality inhering in a bearer by virtue of the bearer's exhibiting fluorescence which is self-induced.","definition_xrefs":["PATOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorescence","termid":"PATO:0000018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autofluorescence","termid":"PATO:0001868"}


id: PBO:0110334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5PF pseudogene 4","termid":"PBO:0110334"}


id: GO:0075223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sporangium germination.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporangium development","termid":"GO:0075310"},{"relation_name":"regulates","term_name":"sporangium germination","termid":"GO:0075222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sporangium germination","synonyms":[{"name":"modulation of sporangium germination","type":"narrow"},{"name":"modulation of sporangium germination on or near host","type":"narrow"}],"termid":"GO:0075223"}


id: PBO:0109464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENM3 antisense transcript 2","termid":"PBO:0109464"}


id: PBO:0082192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aldehyde reductase; substrates include both aromatic and aliphatic aldehydes; uses NADPH as cofactor; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively","termid":"PBO:0082192"}


id: PBO:0080800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exportin 6","termid":"PBO:0080800"}


id: GO:1900699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of o-orsellinic acid biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of o-orsellinic acid biosynthetic process","termid":"GO:1900698"},{"relation_name":"negatively_regulates","term_name":"o-orsellinic acid biosynthetic process","termid":"GO:1900584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of o-orsellinic acid biosynthetic process","synonyms":[{"name":"down regulation of o-orsellinic acid anabolism","type":"exact"},{"name":"down regulation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"down regulation of o-orsellinic acid biosynthetic process","type":"exact"},{"name":"down regulation of o-orsellinic acid formation","type":"exact"},{"name":"down regulation of o-orsellinic acid synthesis","type":"exact"},{"name":"down-regulation of o-orsellinic acid anabolism","type":"exact"},{"name":"down-regulation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"down-regulation of o-orsellinic acid biosynthetic process","type":"exact"},{"name":"down-regulation of o-orsellinic acid formation","type":"exact"},{"name":"down-regulation of o-orsellinic acid synthesis","type":"exact"},{"name":"downregulation of o-orsellinic acid anabolism","type":"exact"},{"name":"downregulation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"downregulation of o-orsellinic acid biosynthetic process","type":"exact"},{"name":"downregulation of o-orsellinic acid formation","type":"exact"},{"name":"downregulation of o-orsellinic acid synthesis","type":"exact"},{"name":"inhibition of o-orsellinic acid anabolism","type":"exact"},{"name":"inhibition of o-orsellinic acid biosynthesis","type":"exact"},{"name":"inhibition of o-orsellinic acid biosynthetic process","type":"narrow"},{"name":"inhibition of o-orsellinic acid formation","type":"exact"},{"name":"inhibition of o-orsellinic acid synthesis","type":"exact"},{"name":"negative regulation of o-orsellinic acid anabolism","type":"exact"},{"name":"negative regulation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"negative regulation of o-orsellinic acid formation","type":"exact"},{"name":"negative regulation of o-orsellinic acid synthesis","type":"exact"}],"termid":"GO:1900699"}


id: PR:000045541
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cyclin-dependent kinase 1 (Schizosaccharomyces pombe) that has been phosphorylated on a Thr residue (Thr-167) within the T-Loop, and Tyr-15 within the ATP binding region. UniProtKB:P04551, Tyr-15, MOD:00048|Thr-167, MOD:00047.","definition_xrefs":["PomBase:MAH","PRO:CNA","PMID:26131711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent kinase 1 (Schizosaccharomyces pombe)","termid":"PR:000036301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cdc2/Phos(Y15,T167)","pombase_gene_id":"SPBC11B10.09","synonyms":[{"name":"Cdc2 phosphorylated 2","type":"related"},{"name":"Cdc2-He","type":"exact"},{"name":"PomBase_original_PRO_term_name: cyclin-dependent kinase 1 phosphorylated 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cdc2/Phos:2","type":"exact"},{"name":"UniProtKB:P04551, Thr-167, MOD:00047|Tyr-15, MOD:00048","type":"exact"},{"name":"cdc2/Phos(Y15,T167)","type":"exact"}],"termid":"PR:000045541"}


id: MONDO:0013589
data:
  {"annotated_genes":["SJAG_04001"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85426],"is_not":false,"summary":null,"term":"MONDO:0013589"}]},"cv_name":"mondo","definition":"Any focal segmental glomerulosclerosis in which the cause of the disease is a mutation in the MYO1E gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited focal segmental glomerulosclerosis","termid":"MONDO:0005363"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"focal segmental glomerulosclerosis 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111131","MEDGEN:481535","UMLS:C3279905","GARD:15761","OMIM:614131"],"synonyms":[{"name":"FSGS6","type":"exact"},{"name":"MYO1E focal segmental glomerulosclerosis","type":"exact"},{"name":"focal segmental glomerulosclerosis 6","type":"exact"},{"name":"focal segmental glomerulosclerosis caused by mutation in MYO1E","type":"exact"},{"name":"focal segmental glomerulosclerosis type 6","type":"exact"},{"name":"glomerulosclerosis, focal segmental, 6","type":"related"}],"termid":"MONDO:0013589","terms_by_termid":{"MONDO:0013589":null},"xrefs":{"Monarch":{"xref_id":"0013589"}}}


id: PBO:0012003
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-consensus GAG acceptor","termid":"PBO:0012003"}


id: PBO:0086087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein packaged into COPII vesicles for ER to Golgi trafficking; forms a complex with Emp47p that may function in trafficking plasma membrane glycoproteins through early secretory pathway; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern","termid":"PBO:0086087"}


id: GO:0002205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins following the induction of and contributing to an immune response.","definition_xrefs":["PMID:14991701","ISBN:0781735149","PMID:11205333","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immunoglobulins involved in immune response","termid":"GO:0002208"},{"relation_name":"is_a","term_name":"somatic hypermutation of immunoglobulin genes","termid":"GO:0016446"},{"relation_name":"part_of","term_name":"B cell affinity maturation","termid":"GO:0002344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"somatic hypermutation of immunoglobulin genes involved in immune response","synonyms":[{"name":"somatic hypermutation of antibody genes during immune response","type":"related"},{"name":"somatic hypermutation of immunoglobulin genes during immune response","type":"related"}],"termid":"GO:0002205"}


id: MONDO:0035942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"B-lymphoblastic leukemia/lymphoma with recurrent genetic abnormality","termid":"MONDO:0035605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"B-lymphoblastic leukemia/lymphoma with t(12;21)(p13.2;q22.1)","secondary_identifiers":["NCIT:C80334","Orphanet:585929","GARD:22344"],"synonyms":[{"name":"B lymphoblastic leukaemia lymphoma with t(12;21)(p13;q22); TEL-AML1","type":"exact"},{"name":"B lymphoblastic leukemia lymphoma with t(12;21)(p13;q22); TEL-AML1","type":"exact"},{"name":"B-lymphoblastic leukemia/lymphoma with t(12;21)(p13.2;q22.1); ETV6-RUNX1","type":"exact"}],"termid":"MONDO:0035942","xrefs":{"Monarch":{"xref_id":"0035942"}}}


id: MONDO:0015838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"uterine disorder","termid":"MONDO:0002654"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cordiform uterus","secondary_identifiers":["UMLS:C0266397","Orphanet:180118","MEDGEN:539891","SCTID:14689000","icd11.foundation:282476394"],"synonyms":[{"name":"uterus arcuatus","type":"exact"},{"name":"uterus cordiformis","type":"exact"}],"termid":"MONDO:0015838","xrefs":{"Monarch":{"xref_id":"0015838"}}}


id: MONDO:0003200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the urethra","direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"carcinoma of urethra","termid":"MONDO:0021327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"urethra adenocarcinoma","secondary_identifiers":["MEDGEN:234461","UMLS:C1336885","NCIT:C6167","ONCOTREE:UAD","DOID:4910"],"synonyms":[{"name":"UAD","type":"related"},{"name":"adenocarcinoma of the urethra","type":"exact"},{"name":"adenocarcinoma of urethra","type":"exact"},{"name":"urethra adenocarcinoma","type":"exact"},{"name":"urethral adenocarcinoma","type":"exact"}],"termid":"MONDO:0003200","xrefs":{"Monarch":{"xref_id":"0003200"}}}


id: PBO:0029981
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_mononucleate_monoseptate_vegetative_cell","termid":"PBO:0029981"}


id: MONDO:0012050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"major depressive disorder","termid":"MONDO:0002009"},{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major depressive disorder 1","secondary_identifiers":["MESH:C563919","MEDGEN:325293","UMLS:C1837929","OMIM:608520"],"synonyms":[{"name":"MDD1","type":"exact"},{"name":"major depressive disorder 1","type":"exact"},{"name":"major depressive disorder type 1","type":"exact"},{"name":"unipolar depression 1","type":"related"}],"termid":"MONDO:0012050","xrefs":{"Monarch":{"xref_id":"0012050"}}}


id: PBO:0066865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 165","termid":"PBO:0066865"}


id: PATO:0000970
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's disposition to being permeated or pervaded by a liquid (as by osmosis or diffusion).","definition_xrefs":["Biology-online:Biology-online"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"permeability","termid":"PATO:0000970"}


id: PBO:0091011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent flavin oxidoreductase, implicated in cellular detoxification from family members","termid":"PBO:0091011"}


id: MONDO:0011890
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of CMT1, caused by mutations in the EGR2 gene (10q21.1), with a variable severity and age of onset (from infancy to adulthood), that usually presents with gait abnormalities, progressive wasting and weakness of distal limb muscles, with possible later involvement of proximal muscles, foot deformity and severe reduction in nerve conduction velocity. Additional features may include scoliosis, cranial nerve deficits such as diplopia, and bilateral vocal cord paresis.","definition_xrefs":["Orphanet:101084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 1","termid":"MONDO:0019011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 1D","secondary_identifiers":["icd11.foundation:2062905967","MEDGEN:334709","DOID:0110150","OMIM:607678","SCTID:719979008","UMLS:C1843247","GARD:9189","MESH:C537985"],"synonyms":[{"name":"CMT 1D","type":"related"},{"name":"CMT1D","type":"exact"},{"name":"Charcot Marie Tooth disease type 1D","type":"related"},{"name":"Charcot-Marie-Tooth disease type 1 caused by mutation in EGR2","type":"exact"},{"name":"Charcot-Marie-Tooth disease, demyelinating, type 1D","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 1D","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy type 1D","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 1D","type":"related"},{"name":"EGR2 Charcot-Marie-Tooth disease type 1","type":"exact"},{"name":"HMSN 1D","type":"related"},{"name":"HMSN ID","type":"exact"},{"name":"HMSN1D","type":"exact"},{"name":"hereditary motor and sensory neuropathy 1D","type":"exact"}],"termid":"MONDO:0011890","xrefs":{"Monarch":{"xref_id":"0011890"}}}


id: SO:0001129
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Left handed type I (dihedral angles):- Residue(i): -140 degrees < chi (1) -120 degrees < -20 degrees, -90 degrees < psi +120 degrees < +40 degrees. Residue(i+1): -140 degrees < phi < -20 degrees, -90 degrees < psi < +40 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asx_turn","termid":"SO:0000912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"asx_turn_left_handed_type_one","secondary_identifiers":["BS:00206"],"synonyms":[{"name":"asx turn left handed type one","type":"exact"},{"name":"asx_turn_il","type":"related"}],"termid":"SO:0001129"}


id: GO:0042066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Glial cell growth that occurs in the perineurium, a cell layer that ensheaths projections of peripheral nerves, such as motor axons.","definition_xrefs":["PMID:18176560","GOC:mah","PMID:11517334"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell growth","termid":"GO:0042065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"perineurial glial growth","termid":"GO:0042066"}


id: PBO:0060503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein 1 like 4 pseudogene 2","termid":"PBO:0060503"}


id: GO:0070264
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor complex that is involved in regulating transcription from RNA polymerase III (Pol III) promoters. TFIIIE contains a specific subset of ribosomal proteins.","definition_xrefs":["PMID:19116144","GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase III transcription regulator complex","termid":"GO:0090576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"transcription factor TFIIIE complex","termid":"GO:0070264"}


id: GO:0031108
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of holo-[acyl-carrier protein].","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"holo-[acyl-carrier-protein] biosynthetic process","synonyms":[{"name":"holo-[acyl-carrier protein] biosynthesis","type":"exact"},{"name":"holo-[acyl-carrier-protein] anabolism","type":"exact"},{"name":"holo-[acyl-carrier-protein] biosynthesis","type":"exact"},{"name":"holo-[acyl-carrier-protein] formation","type":"exact"},{"name":"holo-[acyl-carrier-protein] synthesis","type":"exact"}],"termid":"GO:0031108"}


id: GO:0008514
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the transfer of organic anions from one side of a membrane to the other. 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id: PBO:0078231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 13","termid":"PBO:0078231"}


id: PBO:0059240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L11 pseudogene 3","termid":"PBO:0059240"}


id: GO:0019704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-cysteine to form peptidyl-S-myristoyl-L-cysteine.","definition_xrefs":["RESID:AA0307"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-cysteine S-myristoylation (obsolete GO:0019704)","synonyms":[{"name":"peptidyl-S-myristoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-myristoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-myristoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-myristoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"}],"termid":"GO:0019704"}


id: MONDO:0020487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pontiac fever (PF) is a mild form of legionellosis manifesting with flu-like symptoms such as nausea, myalgia, fever, cough and headache but without pneumonia.","definition_xrefs":["Orphanet:99748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"legionellosis","termid":"MONDO:0005823"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pontiac fever","secondary_identifiers":["icd11.foundation:1670562980","MedDRA:10054161","ICD9:041.89","SCTID:240447002","MEDGEN:575661","GARD:13588","DOID:0050150","NCIT:C128335","UMLS:C0343528"],"termid":"MONDO:0020487","xrefs":{"Monarch":{"xref_id":"0020487"}}}


id: PBO:0089755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphate 1-dehydrogenase","termid":"PBO:0089755"}


id: GO:0042288
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a major histocompatibility complex class I molecule; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein binding","termid":"GO:0042287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"MHC class I protein binding","synonyms":[{"name":"T cell receptor activity","type":"related"},{"name":"alpha-beta T cell receptor activity","type":"related"},{"name":"gamma-delta T cell receptor activity","type":"related"},{"name":"major histocompatibility complex class I binding","type":"exact"},{"name":"major histocompatibility complex class I ligand","type":"narrow"}],"termid":"GO:0042288"}


id: PBO:0056418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myristoylated alanine rich protein kinase C substrate","termid":"PBO:0056418"}


id: MONDO:0044217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete asparagus, specific smell hypersensitivity (obsolete MONDO:0044217)","secondary_identifiers":["OMIM:108390"],"synonyms":[{"name":"asparagus, specific smell hypersensitivity","type":"related"}],"termid":"MONDO:0044217","xrefs":{"Monarch":{"xref_id":"0044217"}}}


id: PR:000050599
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein phosphatase PP1-1 (Schizosaccharomyces pombe) that has not been phosphorylated at the position equivalent to Thr-316 of the amino acid sequence represented by UniProtKB:P13681. Example: UniProtKB:P13681, Thr-316, PR:000026291.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:29899453","PMID:7957097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine-protein kinase sid2 (Schizosaccharomyces pombe)","termid":"PR:000050482"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dis2/UnPhos(T316)","pombase_gene_id":"SPBC776.02c","synonyms":[{"name":"PomBase_original_PRO_term_name: serine/threonine-protein phosphatase PP1-1 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-dis2/UnPhos:1","type":"exact"},{"name":"UniProtKB:P13681, Thr-316, PR:000026291","type":"narrow"},{"name":"dis2/UnPhos(T316)","type":"exact"}],"termid":"PR:000050599"}


id: PR:Q9P3T8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tubulin-specific chaperone C that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01455","PANTHER:PTHR15139:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin-specific chaperone C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.08c","secondary_identifiers":["UniProtKB:Q9P3T8"],"synonyms":[{"name":"CFC (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-TBCC","type":"exact"},{"name":"tubulin-folding cofactor C (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P3T8"}


id: GO:1903255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of hercynylselenocysteine.","definition_xrefs":["PMID:24828577","GOC:TermGenie","GO_REF:0000068"],"gene_count":0,"genotype_count":0,"name":"obsolete hercynylselenocysteine biosynthetic process (obsolete GO:1903255)","synonyms":[{"name":"hercynylselenocysteine anabolism","type":"exact"},{"name":"hercynylselenocysteine biosynthesis","type":"exact"},{"name":"hercynylselenocysteine formation","type":"exact"},{"name":"hercynylselenocysteine synthesis","type":"exact"}],"termid":"GO:1903255"}


id: MONDO:0009982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinitis pigmentosa inversa with deafness","secondary_identifiers":["MESH:C564842","OMIM:268010","MEDGEN:341447","UMLS:C1849405"],"synonyms":[{"name":"retinitis pigmentosa inversa with deafness","type":"exact"}],"termid":"MONDO:0009982","xrefs":{"Monarch":{"xref_id":"0009982"}}}


id: PBO:0089212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE binding protein Sec1","termid":"PBO:0089212"}


id: MONDO:0016337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome associated with dilated cardiomyopathy (obsolete MONDO:0016337)","secondary_identifiers":["Orphanet:217619"],"termid":"MONDO:0016337","xrefs":{"Monarch":{"xref_id":"0016337"}}}


id: MONDO:0034961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare brainstem or cerebellar disorder with ophthalmic involvement as a major feature (obsolete MONDO:0034961)","secondary_identifiers":["Orphanet:519341"],"termid":"MONDO:0034961","xrefs":{"Monarch":{"xref_id":"0034961"}}}


id: PBO:0086026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; undergoes sumoylation; transcription induced under cell wall stress; protein levels are reduced under anaerobic conditions; protein abundance increases in response to DNA replication stress; originally thought to be a mitochondrial ribosomal protein based on sequence analysis","termid":"PBO:0086026"}


id: PBHQ:002
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_has_qualifier_range","direct_ancestors":[{"relation_name":"is_a","term_name":"has_qualifier_range","termid":"PBHQ:001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOT","termid":"PBHQ:002"}


id: PBO:0049115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 179","termid":"PBO:0049115"}


id: PBO:0116192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human NEDD4 family-interacting protein ortholog Bsd1","termid":"PBO:0116192"}


id: GO:0032142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a single guanine insertion or a deletion that results in an unpaired guanine.","definition_xrefs":["GOC:vk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single base insertion or deletion binding","termid":"GO:0032138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"single guanine insertion binding","termid":"GO:0032142"}


id: MONDO:0010753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital tricuspid malformation","termid":"MONDO:0020289"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiac valvular dysplasia, X-linked","secondary_identifiers":["MESH:C535576","UMLS:C0262436","Orphanet:1864","SCTID:718128009","GARD:1096","Orphanet:555877","DOID:0111765","OMIM:314400","MEDGEN:78083"],"synonyms":[{"name":"CVD1","type":"exact"},{"name":"XMVD","type":"exact"},{"name":"cardiac valvular dysplasia, X-linked","type":"exact"},{"name":"congenital valvular dysplasia","type":"exact"},{"name":"myxomatous valvular dystrophy, X-linked","type":"exact"},{"name":"valvular heart disease, congenital","type":"exact"}],"termid":"MONDO:0010753","xrefs":{"Monarch":{"xref_id":"0010753"}}}


id: GO:0098846
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell projection of a podocyte (glomerular visceral epithelial cell) forming a foot-like structure projecting from a podocyte primary projection, that wraps around capillaries of a renal glomerulus. Adjacent feet (pedicels) interdigitate, leaving thin filtration slits between them, which are covered by slit diaphragms.","definition_xrefs":["PMID:25324828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"podocyte foot","secondary_identifiers":["Wikipedia:Podocyte"],"synonyms":[{"name":"pedicel","type":"exact"},{"name":"podocyte foot process","type":"exact"},{"name":"secondary podocyte projection","type":"exact"}],"termid":"GO:0098846"}


id: PBO:0053041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARP1B pseudogene 2","termid":"PBO:0053041"}


id: GO:0050055
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: limonoate D-ring-lactone + H2O = limonoate.","definition_xrefs":["EC:3.1.1.36","MetaCyc:LIMONIN-D-RING-LACTONASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"limonin-D-ring-lactonase activity","secondary_identifiers":["RHEA:10896"],"synonyms":[{"name":"limonin lactone hydrolase activity","type":"related"},{"name":"limonin-D-ring-lactone hydrolase activity","type":"related"},{"name":"limonoate-D-ring-lactone lactonohydrolase activity","type":"related"}],"termid":"GO:0050055"}


id: PBO:0046912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 27 member E4","termid":"PBO:0046912"}


id: FYPO:0002827
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at the silent mating-type cassettes is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at silent mating-type cassette","termid":"FYPO:0000156"},{"relation_name":"is_a","term_name":"decreased chromatin silencing","termid":"FYPO:0002353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased chromatin silencing at silent mating-type cassette","synonyms":[{"name":"decreased chromatin silencing at mating-type region heterochromatin","type":"exact"},{"name":"decreased chromatin silencing at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"decreased chromatin silencing at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"reduced chromatin silencing at silent mating-type cassette","type":"exact"}],"termid":"FYPO:0002827"}


id: GO:1903843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an arsenite ion stimulus.","definition_xrefs":["PMID:12106899","GO_REF:0000071","GOC:mr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to arsenic-containing substance","termid":"GO:0071243"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to arsenite ion","termid":"GO:1903842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to arsenite ion","termid":"GO:1903843"}


id: PBO:0000784
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.2.1.-","termid":"PBO:0000784"}


id: GO:0033975
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-2-haloacid + H2O = (S)-2-hydroxyacid + halide.","definition_xrefs":["EC:3.8.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"(R)-2-haloacid dehalogenase activity","secondary_identifiers":["MetaCyc:RXN-6264","RHEA:22188"],"synonyms":[{"name":"(R)-2-haloacid halidohydrolase activity","type":"related"},{"name":"2-haloalkanoic acid dehalogenase activity","type":"broad"},{"name":"2-haloalkanoid acid halidohydrolase activity","type":"broad"},{"name":"D-2-haloacid dehalogenase activity","type":"related"},{"name":"D-DEX","type":"related"}],"termid":"GO:0033975"}


id: FYPO:0006686
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which DNA double-strand break resection is decreased. DNA double-strand break resection is the process by which long-tract single-stranded 3'-end DNA is generated by removal of bases from a 5' end from which SPO11/Rec12-oligonucleotide complexes have been removed.","definition_xrefs":["GO:0000729","PMID:21931565","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination","termid":"FYPO:0000063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000293","FYPO:0000002"],"is_obsolete":false,"name":"decreased DNA double-strand break processing","synonyms":[{"name":"decreased DNA double-strand break resection","type":"exact"},{"name":"decreased DNA double-strand break resectioning","type":"exact"},{"name":"decreased DSB processing","type":"exact"},{"name":"reduced DNA double-strand break processing","type":"exact"}],"termid":"FYPO:0006686"}


id: GO:0003419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of chondrocytes in a growing endochondral bone, resulting in the expansion of a cell population.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"growth plate cartilage development","termid":"GO:0003417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"growth plate cartilage chondrocyte proliferation","termid":"GO:0003419"}


id: PBO:0036086
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_spatial_extent_of_heterochromatin_assembly","termid":"PBO:0036086"}


id: GO:0051389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that terminates the activity of the active enzyme MAP kinase kinase (MAPKK).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of MAPKK activity (obsolete GO:0051389)","synonyms":[{"name":"inactivation of MAP kinase kinase activity","type":"exact"},{"name":"termination of MAP kinase kinase activity","type":"exact"},{"name":"termination of MAPKK activity","type":"exact"}],"termid":"GO:0051389"}


id: GO:0032162
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A septin band, i.e. a diffuse ring composed of a series of septin bars running parallel to the long axis of the cell, located at the neck of a shmoo (mating projection).","definition_xrefs":["GOC:krc","GOC:mah","PMID:16151244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin band","termid":"GO:0032158"},{"relation_name":"part_of","term_name":"mating projection","termid":"GO:0005937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"mating projection septin band","termid":"GO:0032162"}


id: PBO:0046932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM47E-STBD1 readthrough","termid":"PBO:0046932"}


id: PR:Q9C0X9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- npc2 gene.","definition_xrefs":["UniProtKB:Q9C0X9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylglycerol/phosphatidylinositol transfer protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB8E5.04c","synonyms":[{"name":"PG/PI-TP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-npc2","type":"exact"}],"termid":"PR:Q9C0X9"}


id: PBO:0068014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 319","termid":"PBO:0068014"}


id: PBO:0077661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 10b","termid":"PBO:0077661"}


id: PBO:0005340
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.2.3","termid":"PBO:0005340"}


id: MONDO:0850154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tongue cancer","termid":"MONDO:0004631"},{"relation_name":"is_a","term_name":"oral cavity carcinoma","termid":"MONDO:0044925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"tongue carcinoma","secondary_identifiers":["UMLS:C0558353","DOID:0080641","MEDGEN:154320"],"termid":"MONDO:0850154","xrefs":{"Monarch":{"xref_id":"0850154"}}}


id: MONDO:0800431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"efavirenz central nervous system toxicity, susceptibility to","secondary_identifiers":["MEDGEN:482783","UMLS:C3281153"],"termid":"MONDO:0800431","xrefs":{"Monarch":{"xref_id":"0800431"}}}


id: GO:0038174
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the cytokine interleukin-17A and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jc","GOC:signaling","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-17 receptor activity","termid":"GO:0030368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-17A receptor activity","termid":"GO:0038174"}


id: MONDO:0700133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adenoma that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenoma, non-human","termid":"MONDO:0700133","xrefs":{"Monarch":{"xref_id":"0700133"}}}


id: GO:0031110
data:
  {"annotated_genes":["SJAG_04312","SJAG_02045"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90873],"is_not":false,"summary":null,"term":"GO:0031110"},{"annotations":[101349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of microtubule polymerization or depolymerization by the addition or removal of tubulin heterodimers from a microtubule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule cytoskeleton organization","termid":"GO:0070507"},{"relation_name":"regulates","term_name":"microtubule polymerization or depolymerization","termid":"GO:0031109"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02045":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0000226","GO:0007010"],"is_obsolete":false,"name":"regulation of microtubule polymerization or depolymerization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031110","terms_by_termid":{"GO:0031110":null,"GO:0031117":null}}


id: MONDO:0012045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 5, autosomal dominant","secondary_identifiers":["MEDGEN:324913","MESH:C563922","OMIM:608474","UMLS:C1837972"],"synonyms":[{"name":"MYP5","type":"exact"},{"name":"myopia 5, autosomal dominant","type":"exact"}],"termid":"MONDO:0012045","xrefs":{"Monarch":{"xref_id":"0012045"}}}


id: MONDO:0006842
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm with perivascular epithelioid cell differentiation, often associated with tuberous sclerosis. It is characterized by the presence of smooth muscle and epithelioid cells and by the proliferation of lymphatic vessels. Sites of involvement include the lymph nodes, lung, mediastinum, and retroperitoneum.","definition_xrefs":["NCIT:C3204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm with perivascular epithelioid cell differentiation","termid":"MONDO:0006359"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphangiomyoma","secondary_identifiers":["EFO:1001027","UMLS:C0024223","ICDO:9174/0","MEDGEN:44216","MESH:D008203"],"synonyms":[{"name":"lymphangioleiomyoma","type":"exact"},{"name":"lymphangiomyoma","type":"exact"}],"termid":"MONDO:0006842","xrefs":{"Monarch":{"xref_id":"0006842"}}}


id: MONDO:0007214
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Preaxial brachydactyly-hallux varus syndrome is characterized the association of hallux varus with short thumbs and first toes (involving the metacarpals, metatarsals, and distal phalanges; the proximal and middle phalanges are of normal length) and abduction of the affected digits.","definition_xrefs":["Orphanet:1278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly-preaxial hallux varus syndrome","secondary_identifiers":["UMLS:C1862162","MESH:C537087","OMIM:112450","DOID:0110962","GARD:972","MEDGEN:349442"],"synonyms":[{"name":"Christian brachydactyly","type":"exact"},{"name":"brachydactyly preaxial with hallux varus and thumb abduction","type":"related"},{"name":"brachydactyly, preaxial, with hallux varus and thumb abduction","type":"related"},{"name":"dominant preaxial brachydactyly with hallux varus and thumb abduction","type":"related"},{"name":"preaxial brachydactyly with hallux varus and thumb abduction","type":"exact"}],"termid":"MONDO:0007214","xrefs":{"Monarch":{"xref_id":"0007214"}}}


id: PBO:0017416
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-derives_from","termid":"PBO:0017416"}


id: PBO:0087505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of G protein involved in pheromone response; GTP-binding alpha subunit of heterotrimeric G protein; negatively regulates mating pathway by sequestering G(beta)gamma and triggering an adaptive response; activates Vps34p at endosome; protein abundance increases in response to DNA replication stress; mutations in human homolog GNAS associated with McCune-Albright syndrome","termid":"PBO:0087505"}


id: PBO:0034688
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_vegetative_cell_with_long_curved_cytoplasmic_microtubules","termid":"PBO:0034688"}


id: PBO:0048613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase, IMAP family member 5","termid":"PBO:0048613"}


id: PR:O74539
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mak3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxide stress-activated histidine kinase mak3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC74.06","synonyms":[{"name":"Spom972h-mak3","type":"exact"},{"name":"his-Asp phosphorelay kinase phk2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mcs4-associated kinase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74539"}


id: GO:0043156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Structural changes to eukaryotic chromatin occurring as a result of cation stress, an increase or decrease in the concentration of positively charged ions in the environment.","definition_xrefs":["GOC:vw","GOC:jl","PMID:14762213"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin remodeling in response to cation stress (obsolete GO:0043156)","termid":"GO:0043156"}


id: PBO:0079174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 3","termid":"PBO:0079174"}


id: PBO:0000993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent 3' to 5' DNA helicase, FANCM ortholog Fml1","termid":"PBO:0000993"}


id: GO:0003030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a hydrogen ion stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of hydrogen ion","termid":"GO:0003030"}


id: GO:1900641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of austinol biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"regulation of austinol biosynthetic process","termid":"GO:1900640"},{"relation_name":"negatively_regulates","term_name":"austinol biosynthetic process","termid":"GO:1900560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of austinol biosynthetic process","synonyms":[{"name":"down regulation of austinol anabolism","type":"exact"},{"name":"down regulation of austinol biosynthesis","type":"exact"},{"name":"down regulation of austinol biosynthetic process","type":"exact"},{"name":"down regulation of austinol formation","type":"exact"},{"name":"down regulation of austinol synthesis","type":"exact"},{"name":"down-regulation of austinol anabolism","type":"exact"},{"name":"down-regulation of austinol biosynthesis","type":"exact"},{"name":"down-regulation of austinol biosynthetic process","type":"exact"},{"name":"down-regulation of austinol formation","type":"exact"},{"name":"down-regulation of austinol synthesis","type":"exact"},{"name":"downregulation of austinol anabolism","type":"exact"},{"name":"downregulation of austinol biosynthesis","type":"exact"},{"name":"downregulation of austinol biosynthetic process","type":"exact"},{"name":"downregulation of austinol formation","type":"exact"},{"name":"downregulation of austinol synthesis","type":"exact"},{"name":"inhibition of austinol anabolism","type":"exact"},{"name":"inhibition of austinol biosynthesis","type":"exact"},{"name":"inhibition of austinol biosynthetic process","type":"narrow"},{"name":"inhibition of austinol formation","type":"exact"},{"name":"inhibition of austinol synthesis","type":"exact"},{"name":"negative regulation of austinol anabolism","type":"exact"},{"name":"negative regulation of austinol biosynthesis","type":"exact"},{"name":"negative regulation of austinol formation","type":"exact"},{"name":"negative regulation of austinol synthesis","type":"exact"}],"termid":"GO:1900641"}


id: GO:0071875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by a ligand binding to an adrenergic receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"adrenergic receptor signaling pathway","synonyms":[{"name":"adrenergic receptor signalling pathway","type":"exact"},{"name":"adrenoceptor signaling pathway","type":"exact"}],"termid":"GO:0071875"}


id: FYPO:0002292
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are viable and taper at one end to a diameter smaller than the other, in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable tapered vegetative cell population (obsolete FYPO:0002292)","synonyms":[{"name":"population of tapered viable cells","type":"exact"},{"name":"viable bottle/skittle vegetative cell population","type":"exact"},{"name":"viable skittle-shaped vegetative cell population","type":"exact"},{"name":"viable vegetative cell population with skittle shaped cells","type":"exact"}],"termid":"FYPO:0002292"}


id: PBO:0076157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUGT1 pseudogene 1","termid":"PBO:0076157"}


id: PBO:0043353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caseinolytic mitochondrial matrix peptidase chaperone subunit X","termid":"PBO:0043353"}


id: MONDO:0024659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Kaposi sarcoma that arises from the colon or rectum.","definition_xrefs":["NCIT:C96510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Kaposi's sarcoma","termid":"MONDO:0005055"},{"relation_name":"is_a","term_name":"intestinal cancer","termid":"MONDO:0005814"},{"relation_name":"is_a","term_name":"large intestine disorder","termid":"MONDO:0024634"},{"relation_name":"is_a","term_name":"digestive system infectious disorder","termid":"MONDO:0043424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"colorectal Kaposi sarcoma","secondary_identifiers":["MEDGEN:474466","UMLS:C3272833"],"synonyms":[{"name":"Kaposi's sarcoma (disease) of large intestine","type":"exact"},{"name":"colorectal Kaposi sarcoma","type":"exact"},{"name":"large intestinal Kaposi sarcoma","type":"exact"},{"name":"large intestine Kaposi's sarcoma (disease)","type":"exact"}],"termid":"MONDO:0024659","xrefs":{"Monarch":{"xref_id":"0024659"}}}


id: PBO:0052793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 33B","termid":"PBO:0052793"}


id: MONDO:0012171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"marfanoid habitus with situs inversus","secondary_identifiers":["OMIM:609008","MEDGEN:323046","UMLS:C1836994","MESH:C563814"],"synonyms":[{"name":"marfanoid habitus with situs inversus","type":"exact"}],"termid":"MONDO:0012171","xrefs":{"Monarch":{"xref_id":"0012171"}}}


id: GO:0032906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of transforming growth factor-beta2 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transforming growth factor beta production","termid":"GO:0071604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"transforming growth factor beta2 production","synonyms":[{"name":"TGF-B2 production","type":"exact"},{"name":"TGFB2 production","type":"exact"},{"name":"transforming growth factor-beta2 production","type":"exact"}],"termid":"GO:0032906"}


id: PBO:0083985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutamine synthetase (GS); synthesizes glutamine from glutamate and ammonia; with Glt1p, forms the secondary pathway for glutamate biosynthesis from ammonia; expression regulated by nitrogen source and by amino acid limitation; forms filaments of back-to-back stacks of cylindrical homo-decamers at low pH, leading to enzymatic inactivation and storage during states of advanced cellular starvation; relocalizes from nucleus to cytoplasmic foci upon DNA replication stress","termid":"PBO:0083985"}


id: GO:0090301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of neural crest formation. Neural crest formation is the formation of the specialized region of ectoderm between the neural ectoderm (neural plate) and non-neural ectoderm. The neural crest gives rise to the neural crest cells that migrate away from this region as neural tube formation proceeds.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial to mesenchymal transition","termid":"GO:0010719"},{"relation_name":"is_a","term_name":"regulation of neural crest formation","termid":"GO:0090299"},{"relation_name":"negatively_regulates","term_name":"neural crest formation","termid":"GO:0014029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neural crest formation","termid":"GO:0090301"}


id: PBO:0084112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heavy metal ion homeostasis protein; facilitates trafficking of Smf1p and Smf2p metal transporters to vacuole where they are degraded; acts as an adaptor protein with Rsp5p in the regulated endocytosis of Smf1p and is itself ubiquitylated by Rsp5p; controls metal ion transport, prevents metal hyperaccumulation, functions in copper detoxification","termid":"PBO:0084112"}


id: PBO:0001501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P subunit (predicted)","termid":"PBO:0001501"}


id: SO:0000295
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A type of spliceosomal intron spliced by the U12 spliceosome, that includes U11, U12, U4atac/U6atac and U5 snRNAs.","definition_xrefs":["PMID:9428511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal_intron","termid":"SO:0000662"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U12_intron","synonyms":[{"name":"U12 intron","type":"exact"},{"name":"U12-dependent intron","type":"exact"}],"termid":"SO:0000295"}


id: PBO:0002152
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Cuf1","termid":"PBO:0002152"}


id: PBO:0065595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 11","termid":"PBO:0065595"}


id: PBO:0091291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor EF-1 alpha (eEF1A) lysine 390 methyltransferase Efm6","termid":"PBO:0091291"}


id: PBO:0055379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2809","termid":"PBO:0055379"}


id: MONDO:0003710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ovarian malignant germ cell tumor characterized by the presence of at least two different germ cell components. At least one of the germ cell components is primitive. The most common combination of germ cell elements is dysgerminoma and yolk sac tumor.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian primitive germ cell tumor","termid":"MONDO:0003408"},{"relation_name":"is_a","term_name":"mixed germ cell tumor","termid":"MONDO:0015864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian mixed germ cell neoplasm","secondary_identifiers":["UMLS:C0280135","NCIT:C8114","ONCOTREE:OMGCT","MEDGEN:83602","DOID:5936"],"synonyms":[{"name":"mixed germ cell neoplasm of ovary","type":"exact"},{"name":"mixed germ cell neoplasm of the ovary","type":"exact"},{"name":"mixed germ cell tumor","type":"related"},{"name":"mixed germ cell tumor of ovary","type":"exact"},{"name":"mixed germ cell tumor of the ovary","type":"exact"},{"name":"mixed germ cell tumour","type":"related"},{"name":"mixed germ cell tumour of ovary","type":"exact"},{"name":"mixed germ cell tumour of the ovary","type":"exact"},{"name":"ovarian mixed germ cell neoplasm","type":"exact"},{"name":"ovarian mixed germ cell tumor","type":"exact"},{"name":"ovarian mixed germ cell tumour","type":"exact"},{"name":"ovary mixed germ cell tumor","type":"exact"},{"name":"ovary mixed germ cell tumour","type":"exact"}],"termid":"MONDO:0003710","xrefs":{"Monarch":{"xref_id":"0003710"}}}


id: GO:0051268
data:
  {"annotated_genes":["SJAG_01869"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91298],"is_not":false,"summary":null,"term":"GO:0051268"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-keto amide + 2 H+ (from donor) = (R)-hydroxy amide. Alpha-keto amides are of the form R-CO-CONH2, where R may be aromatic or aliphatic.","definition_xrefs":["GOC:ai","PMID:15564669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01869":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alpha-keto amide reductase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051268","terms_by_termid":{"GO:0051268":null}}


id: PR:Q9UUM6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC405.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUM6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C405.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC405.02c","synonyms":[{"name":"Spom972h-SPBC405.02c","type":"exact"}],"termid":"PR:Q9UUM6"}


id: PBO:0048745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine-N-acyltransferase","termid":"PBO:0048745"}


id: PBO:0002762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex subunit Not3/5 (predicted)","termid":"PBO:0002762"}


id: MONDO:0035791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic anorectal malformation with rectal stenosis (obsolete MONDO:0035791)","secondary_identifiers":["Orphanet:601023"],"termid":"MONDO:0035791","xrefs":{"Monarch":{"xref_id":"0035791"}}}


id: FYPO:0001759
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein phosphatase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phosphatase activity","termid":"FYPO:0004469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"normal protein phosphatase activity","synonyms":[{"name":"normal phosphoprotein phosphatase activity","type":"exact"}],"termid":"FYPO:0001759"}


id: GO:0098913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ventricular cardiac muscle cell membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential.","definition_xrefs":["GOC:tb","GOC:mtg_cardiac_conduct_nov11","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane depolarization during cardiac muscle cell action potential","termid":"GO:0086012"},{"relation_name":"part_of","term_name":"ventricular cardiac muscle cell action potential","termid":"GO:0086005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane depolarization during ventricular cardiac muscle cell action potential","synonyms":[{"name":"electrocardiogram QRS complex","type":"related"},{"name":"ventricular depolarization","type":"related"}],"termid":"GO:0098913"}


id: MONDO:0016121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital myotonia (obsolete MONDO:0016121)","secondary_identifiers":["icd11.foundation:1916703439","Orphanet:206973"],"termid":"MONDO:0016121","xrefs":{"Monarch":{"xref_id":"0016121"}}}


id: PBO:0076945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transferrin receptor","termid":"PBO:0076945"}


id: PBO:0061709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 pseudogene 4","termid":"PBO:0061709"}


id: PBO:0027690
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_vegetative_cell_enlarged_around_nucleus","termid":"PBO:0027690"}


id: MONDO:0045028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease or disorder that is induced by either chemical or radiation exposure.","gene_count":0,"genotype_count":0,"name":"obsolete radiation or chemically induced disorder (obsolete MONDO:0045028)","termid":"MONDO:0045028","xrefs":{"Monarch":{"xref_id":"0045028"}}}


id: PBO:0027118
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_zygotic_meiosis_II","termid":"PBO:0027118"}


id: SO:0001117
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The helix has 3.6 residues per turn which corresponds to a translation of 1.5 angstroms (= 0.15 nm) along the helical axis. Every backbone N-H group donates a hydrogen bond to the backbone C=O group of the amino acid four residues earlier.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"right_handed_peptide_helix","termid":"SO:0001116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"alpha_helix","secondary_identifiers":["BS:00040","http://en.wikipedia.org/wiki/Alpha_helix"],"synonyms":[{"name":"a-helix","type":"related"},{"name":"helix","type":"related"}],"termid":"SO:0001117"}


id: PR:P38938
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cek1 gene.","definition_xrefs":["UniProtKB:P38938","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase cek1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1450.11c","synonyms":[{"name":"Spom972h-cek1","type":"exact"}],"termid":"PR:P38938"}


id: MONDO:0032913
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital heart defects, multiple types, 7","secondary_identifiers":["UMLS:C5394062","OMIM:618780","MEDGEN:1714491"],"synonyms":[{"name":"CHTD7","type":"related"},{"name":"CONGENITAL HEART DEFECTS, MULTIPLE TYPES, 7","type":"related"}],"termid":"MONDO:0032913","xrefs":{"Monarch":{"xref_id":"0032913"}}}


id: PBO:0050887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iduronate 2-sulfatase pseudogene 1","termid":"PBO:0050887"}


id: PBO:0083569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF KCC4","termid":"PBO:0083569"}


id: GO:0051943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the directed movement of amino acid neurotransmitters into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter uptake","termid":"GO:0051582"},{"relation_name":"is_a","term_name":"regulation of amino acid uptake involved in synaptic transmission","termid":"GO:0051941"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"positively_regulates","term_name":"amino acid neurotransmitter reuptake","termid":"GO:0051933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of amino acid uptake involved in synaptic transmission","synonyms":[{"name":"activation of amino acid uptake during transmission of nerve impulse","type":"related"},{"name":"positive regulation of amino acid neurotransmitter reuptake","type":"exact"},{"name":"positive regulation of amino acid neurotransmitter uptake","type":"exact"},{"name":"stimulation of amino acid uptake during transmission of nerve impulse","type":"narrow"},{"name":"up regulation of amino acid uptake during transmission of nerve impulse","type":"related"},{"name":"up-regulation of amino acid uptake during transmission of nerve impulse","type":"related"},{"name":"upregulation of amino acid uptake during transmission of nerve impulse","type":"related"}],"termid":"GO:0051943"}


id: MONDO:0700268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary cancer predisposition due to variation(s) in the BRCA1 gene. Germline pathogenic or likely pathogenic variants in the BRCA1 gene confer an autosomal dominant predisposition to hereditary breast and ovarian cancer. Tumor formation at other sites, including pancreatic cancer have been described.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA1-related cancer predisposition","termid":"MONDO:0700268","xrefs":{"Monarch":{"xref_id":"0700268"}}}


id: MONDO:1011417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypertriglyceridemia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertriglyceridemia, non-human animal","secondary_identifiers":["OMIA:000514"],"termid":"MONDO:1011417","xrefs":{"Monarch":{"xref_id":"1011417"}}}


id: GO:0005850
data:
  {"annotated_genes":["SJAG_03629","SJAG_00466","SJAG_05003"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96070,96720,104910],"is_not":false,"summary":null,"term":"GO:0005850"}]},"cv_name":"cellular_component","definition":"Complex of three heterogeneous polypeptide chains, that form a ternary complex with initiator methionyl-tRNA and GTP. This ternary complex binds to free 40S subunit, which subsequently binds the 5' end of mRNA.","definition_xrefs":["PMID:10216940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00466":null,"SJAG_03629":null,"SJAG_05003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:EIF-2"],"synonyms":[{"name":"eIF-2","type":"exact"},{"name":"eIF2","type":"exact"}],"termid":"GO:0005850","terms_by_termid":{"GO:0005850":null}}


id: GO:1904529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of actin filament binding.","definition_xrefs":["PMID:24520051","GOC:als","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of actin filament binding (obsolete GO:1904529)","synonyms":[{"name":"regulation of F-actin binding","type":"exact"},{"name":"regulation of actin cross-linking activity","type":"related"}],"termid":"GO:1904529"}


id: GO:0007072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription as the cell leaves M phase. M phase is the part of the mitotic cell cycle during which mitosis and cytokinesis take place.","definition_xrefs":["GOC:isa_complete","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription involved in exit from mitosis (obsolete GO:0007072)","synonyms":[{"name":"activation of transcription on exit from mitosis","type":"narrow"}],"termid":"GO:0007072"}


id: GO:0042658
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the antigen binding groove of major histocompatibility complex class II molecules.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC class II protein binding","termid":"GO:0042289"},{"relation_name":"part_of","term_name":"MHC class II protein complex binding","termid":"GO:0023026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"MHC class II protein binding, via antigen binding groove","synonyms":[{"name":"major histocompatibility complex class II protein binding, via antigen binding groove","type":"exact"}],"termid":"GO:0042658"}


id: MONDO:0013249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the PTPRQ gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 84A","secondary_identifiers":["GARD:22634","DOID:0110529","UMLS:C3150654","MEDGEN:462004","OMIM:613391"],"synonyms":[{"name":"DFNB84A","type":"narrow"},{"name":"PTPRQ autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 84A","type":"narrow"},{"name":"autosomal recessive deafness 84A with vestibular dysfunction","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 84A","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in PTPRQ","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 84A","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 84A","type":"exact"},{"name":"deafness, autosomal recessive 84","type":"narrow"},{"name":"deafness, autosomal recessive 84A","type":"narrow"},{"name":"deafness, autosomal recessive 84A, with vestibular dysfunction","type":"narrow"},{"name":"deafness, autosomal recessive 84a","type":"narrow"},{"name":"deafness, autosomal recessive type 84A","type":"narrow"}],"termid":"MONDO:0013249","xrefs":{"Monarch":{"xref_id":"0013249"}}}


id: PR:A6X969
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC806.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:A6X969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C806.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC806.11","synonyms":[{"name":"Spom972h-SPAC806.11","type":"exact"}],"termid":"PR:A6X969"}


id: PBO:0078914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 3-3","termid":"PBO:0078914"}


id: PBO:0066213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 22 pseudogene 6","termid":"PBO:0066213"}


id: MONDO:0021697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the genus CHLAMYDIA.","definition_xrefs":["MESH:D002690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial sexually transmitted disease","termid":"MONDO:0005323"},{"relation_name":"is_a","term_name":"chlamydiaceae infections","termid":"MONDO:0020776"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chlamydia infectious disease","secondary_identifiers":["ICD10CM:A70-A74","EFO:1000863","MESH:D023521"],"synonyms":[{"name":"Chlamydia caused disease or disorder","type":"exact"},{"name":"Chlamydia disease or disorder","type":"exact"},{"name":"Chlamydia infection","type":"related"},{"name":"Chlamydia infectious disease","type":"exact"},{"name":"Chlamydophila caused disease or disorder","type":"exact"},{"name":"Chlamydophila disease or disorder","type":"exact"},{"name":"chlamydia infectious disease","type":"exact"},{"name":"infection, Chlamydia","type":"related"},{"name":"infections, Chlamydia","type":"related"}],"termid":"MONDO:0021697","xrefs":{"Monarch":{"xref_id":"0021697"}}}


id: PBO:0004023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin family protein","termid":"PBO:0004023"}


id: PBO:0027404
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_replication_origin","termid":"PBO:0027404"}


id: MONDO:0013039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any 3-M syndrome in which the cause of the disease is a mutation in the OBSL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-M syndrome","termid":"MONDO:0007477"},{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"3M syndrome 2","secondary_identifiers":["OMIM:612921","MESH:C567862","UMLS:C2752041","GARD:15591","MEDGEN:414168"],"synonyms":[{"name":"3-M syndrome 2","type":"exact"},{"name":"3-M syndrome caused by mutation in OBSL1","type":"exact"},{"name":"3M syndrome 2","type":"exact"},{"name":"3M2","type":"related"},{"name":"OBSL1 3-M syndrome","type":"exact"},{"name":"three M syndrome 2","type":"exact"},{"name":"three M syndrome type 2","type":"exact"}],"termid":"MONDO:0013039","xrefs":{"Monarch":{"xref_id":"0013039"}}}


id: MONDO:1012222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary seborrhea-oleosa, non-human animal","termid":"MONDO:1011740"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary seborrhea-oleosa, domestic cat","secondary_identifiers":["OMIA:000822-9685"],"termid":"MONDO:1012222","xrefs":{"Monarch":{"xref_id":"1012222"}}}


id: MONDO:0018827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of Chilblain lupus that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin vascular disease","termid":"MONDO:0019293"},{"relation_name":"is_a","term_name":"chilblain lupus","termid":"MONDO:0019557"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"},{"relation_name":"is_a","term_name":"type 1 interferonopathy of childhood","termid":"MONDO:0957408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"familial chilblain lupus","secondary_identifiers":["GARD:17874","OMIMPS:610448","MEDGEN:1807766","Orphanet:481662","UMLS:C5688224"],"synonyms":[{"name":"hereditary Chilblain lupus","type":"exact"},{"name":"hereditary chilblain lupus","type":"exact"}],"termid":"MONDO:0018827","xrefs":{"Monarch":{"xref_id":"0018827"}}}


id: PATO:0001037
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001037 absolute life span (obsolete PATO:0001037)","termid":"PATO:0001037"}


id: GO:0061853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neuroblast migration.","definition_xrefs":["PMID:23149556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"neuroblast migration","termid":"GO:0097402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neuroblast migration","termid":"GO:0061853"}


id: GO:0033517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phytic acid, myo-inositol hexakisphosphate, a regulator of intracellular signaling, a highly abundant animal anti-nutrient and a phosphate and mineral storage compound in plant seeds.","definition_xrefs":["PMID:16107538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate metabolic process","termid":"GO:0043647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"myo-inositol hexakisphosphate metabolic process","synonyms":[{"name":"myo-inositol hexakisphosphate metabolism","type":"exact"},{"name":"phytate metabolic process","type":"exact"},{"name":"phytate metabolism","type":"exact"}],"termid":"GO:0033517"}


id: PATO:0002072
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An affinity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"affinity","termid":"PATO:0002070"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased affinity","termid":"PATO:0002072"}


id: PBO:0011517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase, Arb family ABCF1-like (predicted)","termid":"PBO:0011517"}


id: PATO:0001281
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of purple color and high saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purple","termid":"PATO:0000951"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saturated purple","synonyms":[{"name":"bright purple","type":"related"}],"termid":"PATO:0001281"}


id: PR:Q10275
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mba1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G7.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.11","synonyms":[{"name":"Spom972h-mba1","type":"exact"}],"termid":"PR:Q10275"}


id: MONDO:0000857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A Charcot-Marie-Tooth disease that is characterized by optic atrophy followed by retinitis pigmentosa.","definition_xrefs":["DOID:0080069","PMID:25491489"],"gene_count":0,"genotype_count":0,"name":"obsolete Charcot-Marie-Tooth disease type 7 (obsolete MONDO:0000857)","termid":"MONDO:0000857","xrefs":{"Monarch":{"xref_id":"0000857"}}}


id: GO:0043804
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-formimidoylglycine => H2O + imidazol-4-one.","definition_xrefs":["PMID:27286964","RHEA:24935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"imidazolone hydrolase activity","termid":"GO:0043804"}


id: PBO:0035788
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_response_to_mitotic_spindle_assembly_checkpoint_signaling","termid":"PBO:0035788"}


id: FYPO:0000563
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the G2 phase of the mitotic cell cycle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle phase","termid":"FYPO:0002736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic G2 phase progression","synonyms":[{"name":"abnormal G2 phase progression during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic G2 phase progression during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle progression in G2","type":"exact"},{"name":"mitotic cell cycle progression in G2 phase: abnormal","type":"related"}],"termid":"FYPO:0000563"}


id: PBO:0050390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 14","termid":"PBO:0050390"}


id: PBO:0041110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSND pseudogene 3","termid":"PBO:0041110"}


id: PBO:0062637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily J member 6 pseudogene","termid":"PBO:0062637"}


id: PBO:0005319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn13b","termid":"PBO:0005319"}


id: MOD:00248
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-phenylalanine residue to form L-phenylalanine thiazole-4-carboxylic acid.","definition_xrefs":["RESID:AA0243","PubMed:1880060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-phenylalanine thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1-amino-2-phenylethyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-phenylethyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Phe-Cys)","type":"exact"},{"name":"L-phenylalanine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:00248"}


id: PBO:0039871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 29","termid":"PBO:0039871"}


id: PBO:0036129
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_dimethylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036129"}


id: PBO:0030865
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_actomyosin_contractile_ring","termid":"PBO:0030865"}


id: GO:0034371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition, loss or modification of a protein or lipid within a chylomicron, including the hydrolysis of triglyceride by lipoprotein lipase and the subsequent loss of free fatty acid.","definition_xrefs":["GOC:rl","GOC:expert_pt","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride-rich lipoprotein particle remodeling","termid":"GO:0034370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chylomicron remodeling","secondary_identifiers":["Reactome:R-HSA-8963901"],"synonyms":[{"name":"chylomicron remnant formation","type":"related"},{"name":"chylomicron remodelling","type":"exact"}],"termid":"GO:0034371"}


id: GO:0007185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of the target cell where the receptor possesses protein tyrosine phosphatase activity, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme-linked receptor protein signaling pathway","termid":"GO:0007167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell surface receptor protein tyrosine phosphatase signaling pathway","synonyms":[{"name":"transmembrane receptor protein tyrosine phosphatase signaling pathway","type":"exact"},{"name":"transmembrane receptor protein tyrosine phosphatase signalling pathway","type":"exact"}],"termid":"GO:0007185"}


id: MONDO:0016616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"oligoarticular juvenile idiopathic arthritis","termid":"MONDO:0019433"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligoarticular juvenile idiopathic arthritis without anti-nuclear antibodies","secondary_identifiers":["ICD10CM:M08.4","Orphanet:247846"],"synonyms":[{"name":"oligoarticular JIA without anti-nuclear antibodies","type":"exact"},{"name":"pauciarticular chronic arthritis without anti-nuclear antibodies","type":"exact"}],"termid":"MONDO:0016616","xrefs":{"Monarch":{"xref_id":"0016616"}}}


id: GO:0005142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-11 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"interleukin-11 receptor binding","synonyms":[{"name":"IL-11","type":"narrow"},{"name":"interleukin-11 receptor ligand","type":"narrow"}],"termid":"GO:0005142"}


id: GO:0005536
data:
  {"annotated_genes":["SJAG_04495","SJAG_04334"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94017,97492],"is_not":false,"summary":null,"term":"GO:0005536"}]},"cv_name":"molecular_function","definition":"Binding to D-enantiomers of glucose.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide binding","termid":"GO:0048029"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"D-glucose binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glucose binding","type":"broad"}],"termid":"GO:0005536","terms_by_termid":{"GO:0005536":null}}


id: PBO:0090725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine 5'-triphosphate nucleotidohydrolase","termid":"PBO:0090725"}


id: MONDO:1012234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"reduced glutathione deficiency due to GCS deficiency, non-human animal","termid":"MONDO:1011693"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reduced glutathione deficiency due to GCS deficiency, sheep","secondary_identifiers":["OMIA:000853-9940"],"termid":"MONDO:1012234","xrefs":{"Monarch":{"xref_id":"1012234"}}}


id: PR:O94636
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA guanosine-2'-O-methyltransferase TRM11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13370:SF0","OMA:SCHPO03774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine(10)-N2)-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16D10.02","secondary_identifiers":["UniProtKB:O94636"],"synonyms":[{"name":"Spom972h-TRMT11","type":"exact"},{"name":"tRNA guanosine-2'-O-methyltransferase TRM11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA methylase 11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94636"}


id: MONDO:0019444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A zoonotic parasitic disease caused by the consumption of raw or undercooked meat (pork and wild game) infected by nematodes of the genus Trichinella and that is characterized by an enteral (intestinal) phase, that can be asymptomatic or that can manifests with diarrhea, nausea, vomiting and abdominal pain, and a parenteral (muscular) phase, manifesting with fever, periorbital edema, muscle swelling and pain, weakness, and in some cases, skin rash and peripheral edema. Rarely, potentially fatal cardiac (i.e. myocarditis), pulmonary (i.e. pneumonitis, respiratory failure), and nervous system (i.e. meningoencephalitis) complications may occur.","definition_xrefs":["Orphanet:863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Enoplea infectious disease","termid":"MONDO:0005745"},{"relation_name":"is_a","term_name":"parasitic myositis","termid":"MONDO:0016128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"trichinellosis","secondary_identifiers":["MEDGEN:21645","icd11.foundation:284613639","SCTID:709018004","MESH:D014235","NCIT:C85199","SCTID:88264003","DOID:9784","ICD9:124","GARD:5250","MedDRA:10044608","ICD10CM:B75","UMLS:C0040896"],"synonyms":[{"name":"Human trichinellosis","type":"related"},{"name":"Trichinella caused disease or disorder","type":"exact"},{"name":"Trichinella disease or disorder","type":"exact"},{"name":"Trichinella infectious disease","type":"exact"},{"name":"Trichinella spiralis infection","type":"narrow"},{"name":"infection with Trichinella","type":"related"},{"name":"trichiniasis","type":"related"},{"name":"trichinosis","type":"exact"}],"termid":"MONDO:0019444","xrefs":{"Monarch":{"xref_id":"0019444"}}}


id: MONDO:0016681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare histological variant of glioblastoma (WHO grade IV) characterized by a biphasic tissue pattern with alternating areas displaying glial and mesenchymal differentiation (WHO).","definition_xrefs":["NCIT:C3796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain glioblastoma","termid":"MONDO:0002501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"gliosarcoma","secondary_identifiers":["MESH:D018316","UMLS:C0206726","MedDRA:10018340","MEDGEN:64638","EFO:1001465","ONCOTREE:GSARC","DOID:3071","Orphanet:251576","GARD:5653","ICDO:9442/3"],"synonyms":[{"name":"glioblastoma with a sarcomatous component","type":"exact"},{"name":"glioblastoma with sarcomatous component","type":"exact"},{"name":"gliosarcoma","type":"exact"},{"name":"sarcomatous glioblastoma","type":"related"}],"termid":"MONDO:0016681","xrefs":{"Monarch":{"xref_id":"0016681"}}}


id: MONDO:0000272
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autoimmune polyendocrine syndrome type 2 (obsolete MONDO:0000272)","termid":"MONDO:0000272","xrefs":{"Monarch":{"xref_id":"0000272"}}}


id: PBO:0004955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agmatinase 2 (predicted)","termid":"PBO:0004955"}


id: PBO:0038643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA thioesterase 11","termid":"PBO:0038643"}


id: SO:0000116
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence that is modified by editing.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_attribute","termid":"SO:0000237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"edited","termid":"SO:0000116"}


id: MONDO:0013118
data:
  {"annotated_genes":["SJAG_01677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85025],"is_not":false,"summary":null,"term":"MONDO:0013118"}]},"cv_name":"mondo","definition":"Nijmegen breakage syndrome-like disorder is a rare, genetic multiple congenital anomalies/dysmorphic syndrome characterized by growth retardation, short stature, developmental delay, intellectual disability, craniofacial dysmorphism (i.e. severe microcephaly, sloping forehead, prominent eyes, broad nasal ridge, hypoplastic nasal septum, epicanthal folds), spontaneous chromosomal instability, cellular hypersensitivity to ionizing radiation and radioresistant DNA synthesis, without severe infections, immunodeficiency or cancer predisposition. Additional reported features include mild spasticity, slight and nonprogressive ataxia, hyperopia, multiple pigmented nevi, widely spaced nipples, and clinodactyly.","definition_xrefs":["Orphanet:240760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"DNA repair disease","termid":"MONDO:0021190"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021190"}],"interesting_parent_ids":["MONDO:0021190","MONDO:0005066"],"is_obsolete":false,"name":"Nijmegen breakage syndrome-like disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:766753005","GARD:17184","NCIT:C153178","OMIM:613078","MEDGEN:442700","UMLS:C2751318","icd11.foundation:1014526672","MESH:C567767"],"synonyms":[{"name":"NBSLD","type":"exact"},{"name":"NBs-like disorder","type":"exact"},{"name":"Nijmegen breakage syndrome-like disorder","type":"exact"},{"name":"RAD50 deficiency","type":"exact"},{"name":"Rad50 deficiency","type":"related"},{"name":"microcephaly and chromosomal instability without immunodeficiency","type":"exact"},{"name":"microcephaly and spontaneous chromosome instability without immunodeficiency","type":"related"}],"termid":"MONDO:0013118","terms_by_termid":{"MONDO:0013118":null},"xrefs":{"Monarch":{"xref_id":"0013118"}}}


id: MONDO:0023212
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Garret-Tripp syndrome","secondary_identifiers":["MESH:C535646","UMLS:C2930965","MEDGEN:419297"],"synonyms":[{"name":"Garret Tripp syndrome","type":"related"},{"name":"Intellectual disability with postaxial polydactyly, congenital absence of hair, severe seborrhoeic dermatitis, and Perthes' disease of the hip","type":"related"},{"name":"intellectual disability with postaxial polydactyly, congenital absence of hair, severe seborrhoeic dermatitis, and Perthes' disease of the hip","type":"related"},{"name":"mental retardation with postaxial polydactyly, congenital absence of hair, severe seborrhoeic dermatitis, and Perthes' disease of the hip","type":"related"},{"name":"polydactyly alopecia seborrheic dermatitis","type":"related"}],"termid":"MONDO:0023212","xrefs":{"Monarch":{"xref_id":"0023212"}}}


id: PBO:0073052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small cysteine and glycine repeat containing 10 (gene/pseudogene)","termid":"PBO:0073052"}


id: PATO:0001139
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001139 urine glucose composition (obsolete PATO:0001139)","termid":"PATO:0001139"}


id: PR:O60167
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- yap18 gene.","definition_xrefs":["UniProtKB:O60167","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTH domain-containing protein C19F8.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F8.03c","synonyms":[{"name":"Spom972h-yap18","type":"exact"}],"termid":"PR:O60167"}


id: PBO:0058711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6839","termid":"PBO:0058711"}


id: GO:0035204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of lamellocyte differentiation. Lamellocytes differentiate massively in the lymph glands after parasitization and are large flat cells devoted to encapsulation of invaders too large to be phagocytosed by plasmatocytes.","definition_xrefs":["PMID:14734104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lamellocyte differentiation","termid":"GO:0035203"},{"relation_name":"is_a","term_name":"negative regulation of hemocyte differentiation","termid":"GO:0045611"},{"relation_name":"negatively_regulates","term_name":"lamellocyte differentiation","termid":"GO:0035171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lamellocyte differentiation","synonyms":[{"name":"down regulation of lamellocyte differentiation","type":"exact"},{"name":"down-regulation of lamellocyte differentiation","type":"exact"},{"name":"downregulation of lamellocyte differentiation","type":"exact"},{"name":"inhibition of lamellocyte differentiation","type":"narrow"}],"termid":"GO:0035204"}


id: GO:0018684
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1R,4R)-bornane-2,5-dione + FMNH2 + O2 = (1R,4R)-5-oxo-1,2-campholide + FMN + H+ + H2O.","definition_xrefs":["PMID:8515237","RHEA:34415","PMID:3944058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2,5-diketocamphane 1,2-monooxygenase","secondary_identifiers":["EC:1.14.14.108","MetaCyc:R543-RXN","UM-BBD_enzymeID:r0428"],"synonyms":[{"name":"(+)-camphor,reduced-rubredoxin:oxygen oxidoreductase (1,2-lactonizing)","type":"related"},{"name":"2,5-diketocamphane lactonizing enzyme activity","type":"related"},{"name":"camphor 1,2-monooxygenase activity","type":"exact"},{"name":"camphor ketolactonase I activity","type":"related"}],"termid":"GO:0018684"}


id: PR:O14039
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 28S rRNA (cytosine-C(5))-methyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01769","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"25S rRNA (cytosine-C(5))-methyltransferase rcm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.06c","secondary_identifiers":["UniProtKB:O14039"],"synonyms":[{"name":"Spom972h-NSUN5","type":"exact"},{"name":"rRNA m(5)C methyltransferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14039"}


id: PBO:0028097
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_phosphorylation_during_mitotic_G2_phase","termid":"PBO:0028097"}


id: FYPO:0000294
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects any RNA metabolic process.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype","termid":"FYPO:0000292"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"RNA metabolism phenotype","synonyms":[{"name":"RNA metabolism phenotype during mitotic cell cycle","type":"related"},{"name":"RNA metabolism phenotype during vegetative growth","type":"exact"},{"name":"fission yeast RNA metabolism phenotype","type":"exact"}],"termid":"FYPO:0000294"}


id: MONDO:0011519
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the SIX1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 23","secondary_identifiers":["DOID:0110553","UMLS:C1854594","MEDGEN:343162","GARD:1708","MESH:C565357","OMIM:605192"],"synonyms":[{"name":"DFNA 23","type":"narrow"},{"name":"DFNA23","type":"narrow"},{"name":"SIX1 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 23","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 23","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in SIX1","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 23","type":"narrow"},{"name":"deafness, autosomal dominant 23","type":"narrow"},{"name":"deafness, autosomal dominant nonsyndromic sensorineural 23","type":"narrow"},{"name":"deafness, autosomal dominant type 23","type":"narrow"}],"termid":"MONDO:0011519","xrefs":{"Monarch":{"xref_id":"0011519"}}}


id: GO:0055114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.","definition_xrefs":["GOC:rph","GOC:jid","GOC:mlg","GOC:dhl","GOC:ecd","GOC:jh2"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidation-reduction process (obsolete GO:0055114)","synonyms":[{"name":"oxidation reduction","type":"exact"},{"name":"oxidoreductase process","type":"exact"}],"termid":"GO:0055114"}


id: MONDO:0018765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"cryptogenic multifocal ulcerous stenosing enteritis","secondary_identifiers":["icd11.foundation:1401898155","Orphanet:468635","MEDGEN:927932","UMLS:C4302263","SCTID:722849002","GARD:21945"],"synonyms":[{"name":"CMUSE","type":"exact"}],"termid":"MONDO:0018765","xrefs":{"Monarch":{"xref_id":"0018765"}}}


id: PBO:0086788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; physical interaction with Atg27p suggests a possible role in autophagy","termid":"PBO:0086788"}


id: GO:0080120
data:
  {"annotated_genes":["SJAG_00730","SJAG_03396"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89041,96828],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071586"}]},"cv_name":"biological_process","definition":"A series of specific posttranslational modifications to the CAAX box region of CAAX box proteins. CAAX box proteins are eukaryotic proteins that contain a CAAX motif where the C is a cysteine, the two A residues are aliphatic amino acids and the X can be one of several amino acids. The CAAX-box proteins undergo three sequential, enzymatic, post-translational modifications essential to their targeting: First, the proteins are prenylated by one of two prenyltransferases called farnesyltransferase and geranylgeranyltransferase-I. Prenylation results in the covalent attachment of either farnesyl or geranylgeranyl isoprenoid groups to the cysteine in the CAAX box motif. Prenylation is followed by proteolytic removal of the last three amino acids of the protein (AAX). Finally, the newly exposed carboxylate group of the isoprenylcysteine is methylated by an ER-associated prenyl-dependent carboxylmethyltransferase.","definition_xrefs":["PMID:18641086","PMID:12039957","PMID:17114793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00730":null,"SJAG_03396":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"CAAX-box protein maturation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CAAX-box protein processing","type":"related"},{"name":"farnesylated protein maturation","type":"related"}],"termid":"GO:0080120","terms_by_termid":{"GO:0071586":null}}


id: RO:0002503
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"q towards e2 if and only if q is a relational quality such that q inheres-in some e, and e != e2 and q is dependent on e2","direct_ancestors":[{"relation_name":"is_a","term_name":"depends_on","termid":"RO:0002502"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"towards","termid":"RO:0002503"}


id: PBO:0031681
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_peroxisome_degradation","termid":"PBO:0031681"}


id: GO:0042928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which ferrichrome is transported into the cell by specific cell surface receptors. Ferrichromes are any of a group of growth-promoting Fe(III) chelates formed by various genera of microfungi. They are homodetic cyclic hexapeptides made up of a tripeptide of glycine (or other small neutral amino acids) and a tripeptide of an N'acyl-N4-hydroxy-L-ornithine.","definition_xrefs":["GOC:jl","PMID:23192658","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferric-hydroxamate import into cell","termid":"GO:0015687"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0098771","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"ferrichrome import into cell","synonyms":[{"name":"ferrichrome transport","type":"broad"}],"termid":"GO:0042928"}


id: GO:0007147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the second meiotic division occurs in the female germline.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis II","termid":"GO:0007135"},{"relation_name":"is_a","term_name":"female meiotic nuclear division","termid":"GO:0007143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0007049","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"female meiosis II","synonyms":[{"name":"female meiosis II nuclear division","type":"exact"}],"termid":"GO:0007147"}


id: MONDO:0007642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"biliary tract disorder","termid":"MONDO:0004868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"isolated agenesis of gallbladder","secondary_identifiers":["MEDGEN:82736","OMIM:137040","UMLS:C0266251","MESH:C562564","Orphanet:440987","GARD:21844"],"synonyms":[{"name":"gallbladder, agenesis OF","type":"related"}],"termid":"MONDO:0007642","xrefs":{"Monarch":{"xref_id":"0007642"}}}


id: GO:0034067
data:
  {"annotated_genes":["SJAG_01516"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98220],"is_not":false,"summary":null,"term":"GO:0034067"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the Golgi apparatus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to Golgi apparatus","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000042","GO:0072600"],"synonyms":[{"name":"establishment of protein localisation to Golgi","type":"narrow"},{"name":"establishment of protein localization in Golgi","type":"narrow"},{"name":"establishment of protein localization to Golgi","type":"narrow"},{"name":"establishment of protein localization to Golgi apparatus","type":"narrow"},{"name":"protein localisation in Golgi apparatus","type":"exact"},{"name":"protein localization in Golgi apparatus","type":"exact"},{"name":"protein targeting to Golgi","type":"related"},{"name":"protein-Golgi targeting","type":"related"}],"termid":"GO:0034067","terms_by_termid":{"GO:0034067":null}}


id: PBO:0036258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Pex12 involved in peroxisome organization and biogenesis (predicted)","termid":"PBO:0036258"}


id: GO:0002333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immature B cells from the bone marrow acquire the specialized features of T1 stage B cells in the spleen. T1 stage B cells do not express either CD23 or CD21.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transitional stage B cell differentiation","termid":"GO:0002332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transitional one stage B cell differentiation","synonyms":[{"name":"T1 stage B cell differentiation","type":"exact"},{"name":"transitional one stage B cell development","type":"related"},{"name":"transitional one stage B lymphocyte differentiation","type":"exact"},{"name":"transitional one stage B-cell differentiation","type":"exact"},{"name":"transitional one stage B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002333"}


id: PR:P21135
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cut2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P21135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"securin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.01c","synonyms":[{"name":"Spom972h-cut2","type":"exact"},{"name":"cell untimely torn protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"protein Cut2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P21135"}


id: PR:P41893
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A low molecular weight phosphotyrosine protein phosphatase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01610","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low molecular weight phosphotyrosine protein phosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1071.12c","secondary_identifiers":["UniProtKB:P41893"],"synonyms":[{"name":"PTPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ACP1","type":"exact"},{"name":"low molecular weight cytosolic acid phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"small tyrosine phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P41893"}


id: GO:1904263
data:
  {"annotated_genes":["SJAG_00561","SJAG_03405","SJAG_02231","SJAG_02424","SJAG_04910","SJAG_00209","SJAG_02605","SJAG_04496","SJAG_03371","SJAG_05184","SJAG_00457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87498,87787,88897,93805,95587,97500,106640,108757,110031,112355,117864],"is_not":false,"summary":null,"term":"GO:1904263"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of TORC1 signaling.","definition_xrefs":["GOC:TermGenie","PMID:25366275","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of TOR signaling","termid":"GO:0032008"},{"relation_name":"is_a","term_name":"regulation of TORC1 signaling","termid":"GO:1903432"},{"relation_name":"positively_regulates","term_name":"TORC1 signaling","termid":"GO:0038202"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00209":null,"SJAG_00457":null,"SJAG_00561":null,"SJAG_02231":null,"SJAG_02424":null,"SJAG_02605":null,"SJAG_03371":null,"SJAG_03405":null,"SJAG_04496":null,"SJAG_04910":null,"SJAG_05184":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of TORC1 signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of TORC1 signal transduction","type":"narrow"},{"name":"activation of TORC1 signaling","type":"narrow"},{"name":"positive regulation of TORC1 signal transduction","type":"exact"},{"name":"up regulation of TORC1 signal transduction","type":"exact"},{"name":"up regulation of TORC1 signaling","type":"exact"},{"name":"up-regulation of TORC1 signal transduction","type":"exact"},{"name":"up-regulation of TORC1 signaling","type":"exact"},{"name":"upregulation of TORC1 signal transduction","type":"exact"},{"name":"upregulation of TORC1 signaling","type":"exact"}],"termid":"GO:1904263","terms_by_termid":{"GO:1904263":null}}


id: PBO:0052145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNIP1 overlapping transcript 1","termid":"PBO:0052145"}


id: PATO:0000120
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000120 absolute height (obsolete PATO:0000120)","termid":"PATO:0000120"}


id: GO:0016578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by removal of ubiquitin groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histone deubiquitination (obsolete GO:0016578)","synonyms":[{"name":"histone deubiquitinylation","type":"exact"},{"name":"histone deubiquitylation","type":"exact"}],"termid":"GO:0016578"}


id: PBO:0081820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 737","termid":"PBO:0081820"}


id: PBO:0086997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Reverse transcriptase required for splicing of the COX1 pre-mRNA; encoded by a mobile group II intron within the mitochondrial COX1 gene","termid":"PBO:0086997"}


id: PBO:0056530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malonyl-CoA-acyl carrier protein transacylase","termid":"PBO:0056530"}


id: MONDO:0005642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Conjunctivitis due to hypersensitivity to various allergens.","definition_xrefs":["MESH:D003233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic conjunctivitis","termid":"MONDO:0002314"},{"relation_name":"is_a","term_name":"eye allergy","termid":"MONDO:0005551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005328"],"is_obsolete":false,"name":"atopic conjunctivitis","secondary_identifiers":["NCIT:C34506","MEDGEN:3590","EFO:0007141","SCTID:473460002","DOID:11204","HP:0007879","ICD9:372.14","UMLS:C0009766"],"synonyms":[{"name":"Atopic conjunctivitis","type":"exact"},{"name":"allergic conjunctivitis","type":"exact"},{"name":"allergic conjunctivitis (disease)","type":"exact"},{"name":"allergic form of conjunctivitis (disease)","type":"exact"}],"termid":"MONDO:0005642","xrefs":{"Monarch":{"xref_id":"0005642"}}}


id: PBO:0082607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Co-chaperone that binds and regulates Hsp90 family chaperones; plays a role in determining prion variants; important for pp60v-src activity in yeast; homologous to the mammalian p23 proteins, and like p23 can regulate telomerase activity; protein abundance increases in response to DNA replication stress","termid":"PBO:0082607"}


id: PBO:0049692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacid oxidase 2","termid":"PBO:0049692"}


id: PBO:0061238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP53 antisense RNA 1","termid":"PBO:0061238"}


id: FYPO:0002113
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, and is curved along the long axis. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"curved vegetative cell","termid":"FYPO:0000016"},{"relation_name":"is_a","term_name":"curved vegetative cell","termid":"FYPO:0000016"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell shape","termid":"FYPO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000004","FYPO:0000005","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"inviable curved vegetative cell","synonyms":[{"name":"curved inviable cell","type":"exact"},{"name":"inviable curved cell","type":"exact"},{"name":"inviable curved cell during vegetative growth","type":"exact"},{"name":"inviable curved vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; curved vegetative cell","type":"exact"}],"termid":"FYPO:0002113"}


id: MONDO:0034039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic hemoglobinopathy (obsolete MONDO:0034039)","secondary_identifiers":["Orphanet:466066"],"termid":"MONDO:0034039","xrefs":{"Monarch":{"xref_id":"0034039"}}}


id: PBO:0071307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 30","termid":"PBO:0071307"}


id: MONDO:0002044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ectropion","termid":"MONDO:0002043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"spastic ectropion","secondary_identifiers":["ICD9:374.13","SCTID:80846000","DOID:1571","MEDGEN:509843","UMLS:C0155195"],"termid":"MONDO:0002044","xrefs":{"Monarch":{"xref_id":"0002044"}}}


id: GO:0002297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a CD4-positive, alpha-beta T cell becomes committed to becoming a T-helper 2 cell, a CD4-positive, alpha-beta T cell specialized to promote immunological processes often associated with resistance to extracellular organisms such as helminths, enhanced production of particular antibody isotypes, and pathological conditions such as allergy.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-helper cell lineage commitment","termid":"GO:0002295"},{"relation_name":"part_of","term_name":"T-helper 2 cell differentiation","termid":"GO:0045064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 2 cell lineage commitment","synonyms":[{"name":"T-helper 2 cell fate commitment","type":"exact"},{"name":"Th2 fate commitment","type":"exact"}],"termid":"GO:0002297"}


id: PBO:0069336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 596, pseudogene","termid":"PBO:0069336"}


id: MONDO:0017433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dysostosis with combined reduction defects of upper and lower limbs (obsolete MONDO:0017433)","secondary_identifiers":["icd11.foundation:1211657447","Orphanet:294957"],"termid":"MONDO:0017433","xrefs":{"Monarch":{"xref_id":"0017433"}}}


id: MONDO:0033483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial polycythemia in which the cause of the disease is a mutation in the EPO gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial polycythemia","termid":"MONDO:0001115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"erythrocytosis, familial, 5","secondary_identifiers":["DOID:0080290","OMIM:617907","UMLS:C4693552","MEDGEN:1638941"],"synonyms":[{"name":"ECYT5","type":"related"},{"name":"EPO familial polycythemia","type":"exact"},{"name":"erythrocytosis, familial, 5","type":"exact"},{"name":"familial erythrocytosis 5","type":"related"},{"name":"familial polycythemia caused by mutation in EPO","type":"exact"}],"termid":"MONDO:0033483","xrefs":{"Monarch":{"xref_id":"0033483"}}}


id: MONDO:0022825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital cystic eye","secondary_identifiers":["GARD:10617","UMLS:C0158543","MEDGEN:510582","icd11.foundation:2061090928","Orphanet:519384"],"synonyms":[{"name":"CCE","type":"related"}],"termid":"MONDO:0022825","xrefs":{"Monarch":{"xref_id":"0022825"}}}


id: PBO:0067472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 602, pseudogene","termid":"PBO:0067472"}


id: GO:1903719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of I-kappaB phosphorylation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23675531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein phosphorylation","termid":"GO:0001932"},{"relation_name":"regulates","term_name":"I-kappaB phosphorylation","termid":"GO:0007252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of I-kappaB phosphorylation","synonyms":[{"name":"regulation of IKB phosphorylation","type":"exact"},{"name":"regulation of IkappaB phosphorylation","type":"exact"},{"name":"regulation of inhibitor of NF-kappaB phosphorylation","type":"exact"},{"name":"regulation of inhibitor of kappaB phosphorylation","type":"exact"}],"termid":"GO:1903719"}


id: GO:0032120
data:
  {"annotated_genes":["SJAG_02248","SJAG_04922","SJAG_02320","SJAG_03746","SJAG_03915","SJAG_00663","SJAG_03688","SJAG_00971","SJAG_04615","SJAG_00826","SJAG_01769","SJAG_04470","SJAG_03536","SJAG_04275","SJAG_02529","SJAG_04781","SJAG_04010","SJAG_04080","SJAG_02736","SJAG_00114","SJAG_02169","SJAG_02241"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90774,94855,97041,97080,98329,99332,99333,99402,101208,104781,106874,109607,113423,116422,118031,118332,118513],"is_not":false,"summary":null,"term":"GO:0032120"},{"annotations":[90209],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[116425],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903023"},{"annotations":[105501,115468,93990,99337,99336,99614],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The process in which the nascent membrane forms at the meiotic outer plaque and grows until closure occurs and forespores, or prospores, are formed.","definition_xrefs":["GOC:clt","PMID:27630265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"is_a","term_name":"membrane assembly","termid":"GO:0071709"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"ascospore-type prospore assembly","termid":"GO:0031321"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00663":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_01769":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02529":null,"SJAG_02736":null,"SJAG_03536":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04922":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0030437"}],"interesting_parent_ids":["GO:0008150","GO:0030437","GO:0044085","GO:0007049","GO:0061024"],"is_obsolete":false,"name":"ascospore-type prospore membrane formation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0099097"],"synonyms":[{"name":"FSM assembly","type":"exact"},{"name":"FSM biosynthesis","type":"exact"},{"name":"FSM formation","type":"exact"},{"name":"ascospore-type prospore membrane assembly","type":"related"},{"name":"forespore membrane biosynthesis","type":"exact"},{"name":"forespore membrane formation","type":"exact"},{"name":"prospore membrane biogenesis","type":"related"}],"termid":"GO:0032120","terms_by_termid":{"GO:0032120":null,"GO:0070583":null,"GO:1903023":null,"GO:1903024":null}}


id: GO:1902000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of homogentisate.","definition_xrefs":["GOC:TermGenie","PMID:22980205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"homogentisate metabolic process","termid":"GO:1901999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"homogentisate catabolic process","synonyms":[{"name":"homogentisate breakdown","type":"exact"},{"name":"homogentisate catabolism","type":"exact"},{"name":"homogentisate degradation","type":"exact"}],"termid":"GO:1902000"}


id: FYPO:0000886
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in centromere outer repeat regions is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 dimethylation at centromere during vegetative growth","termid":"FYPO:0000867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"abnormal histone H3-K9 dimethylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"abnormal histone H3 K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 dimethylation at centromere otr during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 dimethylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3-K9 dimethylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 dimethylation at pericentric region during vegetative growth","type":"related"},{"name":"abnormal histone H3-K9 dimethylation at pericentromeric region during vegetative growth","type":"related"},{"name":"abnormal histone H3K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abnormal histone H3K9me2 at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abnormal histone lysine H3 K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000886"}


id: GO:0008875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-gluconate + NADP+ = dehydro-D-gluconate + NADPH + H+.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"gluconate dehydrogenase activity","termid":"GO:0008875"}


id: PBO:0077232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane channel like 8","termid":"PBO:0077232"}


id: PBO:0049165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 4 pseudogene 7","termid":"PBO:0049165"}


id: GO:0080027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a herbivore.","definition_xrefs":["PMID:18987211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to herbivore","termid":"GO:0080027"}


id: PATO:0002054
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being flattened along transverse axis.","definition_xrefs":["PATOC:msp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flattened","termid":"PATO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laterally compressed","synonyms":[{"name":"laterally flattened","type":"exact"},{"name":"transversely flattened","type":"related"}],"termid":"PATO:0002054"}


id: PBO:0085833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery; msc3 mutants are defective in directing meiotic recombination events to homologous chromatids; potential Cdc28p substrate; protein abundance increases in response to DNA replication stress","termid":"PBO:0085833"}


id: MONDO:0002434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer involving a oculomotor nerve.","definition_xrefs":["MONDO:patterns/cancer"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant cranial nerve neoplasm","termid":"MONDO:0002433"},{"relation_name":"is_a","term_name":"oculomotor nerve neoplasm","termid":"MONDO:0002435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"oculomotor nerve cancer","secondary_identifiers":["SCTID:93929003","UMLS:C0686417","NCIT:C6995","DOID:2816","MEDGEN:195786"],"synonyms":[{"name":"IIIrd cranial nerve neoplasm, malignant","type":"exact"},{"name":"cancer of oculomotor nerve","type":"exact"},{"name":"malignant neoplasm of oculomotor nerve","type":"exact"},{"name":"malignant oculomotor nerve neoplasm","type":"exact"},{"name":"malignant oculomotor nerve tumor","type":"related"},{"name":"malignant oculomotor nerve tumour","type":"related"},{"name":"oculomotor nerve cancer","type":"exact"},{"name":"oculomotor nerve neoplasm, malignant","type":"exact"},{"name":"primary malignant neoplasm of oculomotor nerve","type":"exact"}],"termid":"MONDO:0002434","xrefs":{"Monarch":{"xref_id":"0002434"}}}


id: MONDO:0003786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A choriocarcinoma that arises from the testis during childhood.","definition_xrefs":["NCIT:C6544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choriocarcinoma of testis","termid":"MONDO:0003508"},{"relation_name":"is_a","term_name":"childhood testicular germ cell tumor","termid":"MONDO:0003758"},{"relation_name":"is_a","term_name":"malignant childhood germ cell neoplasm","termid":"MONDO:0004479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood testicular choriocarcinoma","secondary_identifiers":["UMLS:C1333006","MEDGEN:272469","DOID:6160"],"synonyms":[{"name":"childhood choriocarcinoma of testis","type":"exact"},{"name":"childhood choriocarcinoma of the testis","type":"exact"},{"name":"childhood testicular choriocarcinoma","type":"exact"},{"name":"choriocarcinoma of testis of childhood","type":"exact"},{"name":"paediatric choriocarcinoma of testis","type":"exact"},{"name":"paediatric choriocarcinoma of the testis","type":"exact"},{"name":"paediatric testicular choriocarcinoma","type":"exact"},{"name":"pediatric choriocarcinoma of testis","type":"exact"},{"name":"pediatric choriocarcinoma of the testis","type":"exact"},{"name":"pediatric testicular choriocarcinoma","type":"exact"}],"termid":"MONDO:0003786","xrefs":{"Monarch":{"xref_id":"0003786"}}}


id: PBO:0055228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2654","termid":"PBO:0055228"}


id: GO:0030762
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-tetrahydrocolumbamine + S-adenosyl-L-methionine(1+) = S-adenosyl-L-homocysteine + H+ + tetrahydropalmatine.","definition_xrefs":["RHEA:22536","EC:2.1.1.89"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"tetrahydrocolumbamine 2-O-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04077","MetaCyc:2.1.1.89-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:5,8,13,13a-tetrahydrocolumbamine 2-O-methyltransferase activity","type":"related"},{"name":"tetrahydrocolumbamine methyltransferase activity","type":"related"}],"termid":"GO:0030762"}


id: GO:0098519
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nucleotide + H2O = nucleotide + phosphate.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleotide phosphatase activity, acting on free nucleotides (obsolete GO:0098519)","synonyms":[{"name":"nucleotide phosphatase activity","type":"exact"}],"termid":"GO:0098519"}


id: MONDO:0021439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the pituitary gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign reproductive system neoplasm","termid":"MONDO:0000383"},{"relation_name":"is_a","term_name":"benign endocrine neoplasm","termid":"MONDO:0000627"},{"relation_name":"is_a","term_name":"bone benign neoplasm","termid":"MONDO:0000631"},{"relation_name":"is_a","term_name":"pituitary tumor","termid":"MONDO:0017611"},{"relation_name":"is_a","term_name":"benign neoplasm of brain","termid":"MONDO:0021451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of pituitary gland","secondary_identifiers":["NCIT:C4782","UMLS:C0496901","SCTID:92296004","DOID:60009","ICD10CM:D35.2","icd11.foundation:1871539651","MEDGEN:141679"],"synonyms":[{"name":"benign neoplasm of pituitary","type":"exact"},{"name":"benign neoplasm of the pituitary","type":"exact"},{"name":"benign neoplasm of the pituitary gland","type":"exact"},{"name":"benign pituitary gland neoplasm","type":"exact"},{"name":"benign pituitary gland tumor","type":"exact"},{"name":"benign pituitary gland tumour","type":"exact"},{"name":"benign pituitary neoplasm","type":"exact"},{"name":"benign pituitary tumor","type":"exact"},{"name":"benign pituitary tumour","type":"exact"},{"name":"benign tumor of pituitary","type":"exact"},{"name":"benign tumor of pituitary gland","type":"exact"},{"name":"benign tumor of the pituitary","type":"exact"},{"name":"benign tumor of the pituitary gland","type":"exact"},{"name":"benign tumour of pituitary","type":"exact"},{"name":"benign tumour of pituitary gland","type":"exact"},{"name":"benign tumour of the pituitary","type":"exact"},{"name":"benign tumour of the pituitary gland","type":"exact"},{"name":"pituitary gland benign neoplasm","type":"exact"},{"name":"pituitary neoplasms, benign","type":"exact"},{"name":"pituitary tumor, benign","type":"exact"}],"termid":"MONDO:0021439","xrefs":{"Monarch":{"xref_id":"0021439"}}}


id: PBO:0001423
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.2.1","termid":"PBO:0001423"}


id: GO:1900834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of emericellin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of xanthone-containing compound biosynthetic process","termid":"GO:1900183"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"emericellin biosynthetic process","termid":"GO:1900766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"regulation of emericellin biosynthetic process","synonyms":[{"name":"regulation of Variecoxanthone B anabolism","type":"related"},{"name":"regulation of Variecoxanthone B biosynthesis","type":"related"},{"name":"regulation of Variecoxanthone B biosynthetic process","type":"related"},{"name":"regulation of Variecoxanthone B formation","type":"related"},{"name":"regulation of Variecoxanthone B synthesis","type":"related"},{"name":"regulation of emericellin anabolism","type":"exact"},{"name":"regulation of emericellin biosynthesis","type":"exact"},{"name":"regulation of emericellin formation","type":"exact"},{"name":"regulation of emericellin synthesis","type":"exact"}],"termid":"GO:1900834"}


id: PBO:0038579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activator of basal transcription 1","termid":"PBO:0038579"}


id: PBO:0002293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial single-stranded DNA binding protein Rim1","termid":"PBO:0002293"}


id: SO:0000818
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that rescues.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"wild_type","termid":"SO:0000817"},{"relation_name":"is_a","term_name":"rescue_gene","termid":"SO:0000816"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wild_type_rescue_gene","synonyms":[{"name":"wild type rescue gene","type":"exact"}],"termid":"SO:0000818"}


id: MONDO:0010476
data:
  {"annotated_genes":["SJAG_00115"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86408],"is_not":false,"summary":null,"term":"MONDO:0010476"}]},"cv_name":"mondo","definition":"Beta-propeller protein-associated neurodegeneration (BPAN), also known as static encephalopathy of childhood with neurodegeneration in adulthood, is a rare form of neurodegeneration with brain iron accumulation (NBIA) characterized by early-onset developmental delay and further neurological deterioration in early adulthood.","definition_xrefs":["Orphanet:329284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurodegeneration with brain iron accumulation","termid":"MONDO:0018307"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00115":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"neurodegeneration with brain iron accumulation 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110739","UMLS:C3550973","MEDGEN:763887","NCIT:C175210","SCTID:732959007","GARD:12570","OMIM:300894"],"synonyms":[{"name":"BPAN","type":"exact"},{"name":"NBIA5","type":"exact"},{"name":"SENDA","type":"exact"},{"name":"WDR45 neurodegeneration with brain iron accumulation","type":"exact"},{"name":"beta-propeller protein-associated neurodegeneration","type":"exact"},{"name":"neurodegeneration with brain iron accululation 5","type":"related"},{"name":"neurodegeneration with brain iron accumulation 5","type":"exact"},{"name":"neurodegeneration with brain iron accumulation 5, X-linked dominant","type":"exact"},{"name":"neurodegeneration with brain iron accumulation caused by mutation in WDR45","type":"exact"},{"name":"neurodegeneration with brain iron accumulation type 5","type":"exact"},{"name":"static encephalopathy Of childhood with neurodegeneration In adulthood","type":"exact"},{"name":"static encephalopathy of childhood with neurdegeneration in adulthood","type":"exact"},{"name":"static encephalopathy of childhood with neurodegeneration in adulthood","type":"related"}],"termid":"MONDO:0010476","terms_by_termid":{"MONDO:0010476":null},"xrefs":{"Monarch":{"xref_id":"0010476"}}}


id: GO:0060689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features that characterize the cells of the salivary gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"salivary gland development","termid":"GO:0007431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell differentiation involved in salivary gland development","termid":"GO:0060689"}


id: PBO:0045230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC17 pseudogene 1","termid":"PBO:0045230"}


id: PBO:0091031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER chaperone Rot1","termid":"PBO:0091031"}


id: GO:1904369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sclerenchyma cell differentiation.","definition_xrefs":["GO_REF:0000058","PMID:26025534","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of sclerenchyma cell differentiation","termid":"GO:1904368"},{"relation_name":"positively_regulates","term_name":"sclerenchyma cell differentiation","termid":"GO:0014001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sclerenchyma cell differentiation","synonyms":[{"name":"up regulation of sclerenchyma cell differentiation","type":"exact"},{"name":"up-regulation of sclerenchyma cell differentiation","type":"exact"},{"name":"upregulation of sclerenchyma cell differentiation","type":"exact"}],"termid":"GO:1904369"}


id: MONDO:0021650
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelial neoplasm with neuroendocrine differentiation that arises from the uterine corpus. It includes carcinoid tumor, small cell carcinoma pulmonary type, and large cell neuroendocrine carcinoma.","definition_xrefs":["NCIT:C126771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine neoplasm","termid":"MONDO:0019496"},{"relation_name":"is_a","term_name":"corpus uteri neoplasm","termid":"MONDO:0021254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine corpus neuroendocrine neoplasm","secondary_identifiers":["MEDGEN:925580","UMLS:C4288048"],"synonyms":[{"name":"body of uterus NET","type":"exact"},{"name":"body of uterus neuroendocrine neoplasm","type":"exact"},{"name":"body of uterus neuroendocrine tumor","type":"exact"},{"name":"body of uterus neuroendocrine tumor, well differentiated, low or intermediate grade","type":"exact"},{"name":"body of uterus neuroendocrine tumour","type":"exact"},{"name":"neuroendocrine neoplasm of body of uterus","type":"exact"},{"name":"uterine corpus neuroendocrine neoplasm","type":"exact"},{"name":"uterine corpus neuroendocrine tumor","type":"exact"},{"name":"uterine corpus neuroendocrine tumour","type":"exact"}],"termid":"MONDO:0021650","xrefs":{"Monarch":{"xref_id":"0021650"}}}


id: GO:0051777
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:ent-kaur-16-en-19-oate + 3 O2 + 3 reduced [NADPH--hemoprotein reductase] = gibberellin A12 + 4 H+ + 4 H2O + 3 oxidized [NADPH--hemoprotein reductase]. Catalyzes three successive oxidations of ent-kaurenoic acid.","definition_xrefs":["RHEA:33219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"ent-kaurenoic acid monooxygenase activity","secondary_identifiers":["EC:1.14.14.107"],"synonyms":[{"name":"ent-kaurenoate oxidase activity","type":"related"},{"name":"ent-kaurenoic acid oxidase activity","type":"related"}],"termid":"GO:0051777"}


id: GO:0004851
data:
  {"annotated_genes":["SJAG_01192"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114932],"is_not":false,"summary":null,"term":"GO:0004851"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 S-adenosyl-L-methionine + uroporphyrin III = 2 S-adenosyl-L-homocysteine + precorrin-2.","definition_xrefs":["EC:2.1.1.107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-methyltransferase activity","termid":"GO:0008169"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01192":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"uroporphyrin-III C-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-13403","RHEA:32459"],"synonyms":[{"name":"CobA","type":"related"},{"name":"CysG","type":"related"},{"name":"S-adenosyl-L-methionine-dependent uroporphyrinogen III methylase activity","type":"related"},{"name":"S-adenosyl-L-methionine:uroporphyrin-III C-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:uroporphyrinogen-III C-methyltransferase activity","type":"related"},{"name":"SUMT activity","type":"related"},{"name":"SirA","type":"related"},{"name":"adenosylmethionine-uroporphyrinogen III methyltransferase activity","type":"related"},{"name":"urogen III methylase activity","type":"related"},{"name":"uroporphyrinogen III methylase activity","type":"related"},{"name":"uroporphyrinogen methyltransferase activity","type":"related"},{"name":"uroporphyrinogen-III C-methyltransferase activity","type":"related"},{"name":"uroporphyrinogen-III methylase activity","type":"related"},{"name":"uroporphyrinogen-III methyltransferase activity","type":"related"}],"termid":"GO:0004851","terms_by_termid":{"GO:0004851":null}}


id: PBO:0029686
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_oxidation","termid":"PBO:0029686"}


id: GO:0010127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions using mycothiol to convert an alkylating agent to an S-conjugate of mycothiol. The latter is cleaved to release mercapturic acid which is excreted from the cell.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification","termid":"GO:0098754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"mycothiol-dependent detoxification","synonyms":[{"name":"mycothiol-dependent detoxification of alkylating agent","type":"narrow"}],"termid":"GO:0010127"}


id: PBO:0056476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated tyrosine carboxypeptidase 2","termid":"PBO:0056476"}


id: MONDO:0001835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe or complete loss of facial muscle motor function. This condition may result from central or peripheral lesions. Damage to CNS motor pathways from the cerebral cortex to the facial nuclei in the pons leads to facial weakness that generally spares the forehead muscles. facial nerve diseases generally results in generalized hemifacial weakness. neuromuscular junction diseases and muscular diseases may also cause facial paralysis or paresis.","definition_xrefs":["MESH:D005158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palsy","termid":"MONDO:0006496"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial paralysis","secondary_identifiers":["DOID:13934","UMLS:C0015469","SCTID:280816001","MEDGEN:5101"],"synonyms":[{"name":"face palsy","type":"exact"},{"name":"facial palsy","type":"exact"},{"name":"palsy of face","type":"exact"}],"termid":"MONDO:0001835","xrefs":{"Monarch":{"xref_id":"0001835"}}}


id: PBO:0063057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAN3 antisense RNA 1","termid":"PBO:0063057"}


id: MONDO:0016132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare hereditary disease with peripheral neuropathy (obsolete MONDO:0016132)","secondary_identifiers":["Orphanet:207015"],"termid":"MONDO:0016132","xrefs":{"Monarch":{"xref_id":"0016132"}}}


id: GO:0016939
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex consisting of two distinct motor subunits that form a heterodimer complexed with a third non-motor accessory subunit, the kinesin associated protein or KAP; the KIF3 heterodimer interacts via its C-terminal portion with KAP, which is thought to regulate the binding of the motor to cargo membranes.","definition_xrefs":["PMID:20930137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinesin complex","termid":"GO:0005871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0015630"],"is_obsolete":false,"name":"kinesin II complex","termid":"GO:0016939"}


id: SO:0002339
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes for a scaRNA (small Cajal body-specific RNA).","definition_xrefs":["PMID:28869095","PMID:27775477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA_gene","termid":"SO:0001267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scaRNA_gene","synonyms":[{"name":"Small Cajal body-specific RNA gene","type":"exact"},{"name":"scaRNA gene","type":"exact"}],"termid":"SO:0002339"}


id: GO:0010484
data:
  {"annotated_genes":["SJAG_01204","SJAG_02990","SJAG_02165","SJAG_02773"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90897],"is_not":false,"summary":null,"term":"GO:0010484"},{"annotations":[90239,90898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036408"},{"annotations":[90899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043993"},{"annotations":[98468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044016"},{"annotations":[108814,108815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032931"},{"annotations":[90900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043992"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 = CoA + acetyl-histone H3.","definition_xrefs":["PMID:19056256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone acetyltransferase activity","termid":"GO:0004402"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01204":null,"SJAG_02165":null,"SJAG_02773":null,"SJAG_02990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0034212","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"histone H3 acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"H3 histone acetylase activity","type":"exact"},{"name":"H3 histone acetyltransferase activity","type":"exact"}],"termid":"GO:0010484","terms_by_termid":{"GO:0010484":null,"GO:0032931":null,"GO:0036408":null,"GO:0043992":null,"GO:0043993":null,"GO:0044016":null}}


id: PBO:0025480
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"a cup of GReen Tea wakes up the sleepy guy","termid":"PBO:0025480"}


id: PBO:0066429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS like estrogen regulated growth inhibitor","termid":"PBO:0066429"}


id: PBO:0073629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 14","termid":"PBO:0073629"}


id: PBO:0043290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain containing 9A","termid":"PBO:0043290"}


id: PBO:0002694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII cargo receptor Sec24/Sfb2 subunit","termid":"PBO:0002694"}


id: GO:0035711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a T-helper 1 cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.","definition_xrefs":["GOC:BHF","CL:0000545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell activation","termid":"GO:0035710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 1 cell activation","synonyms":[{"name":"Th1 cell activation","type":"exact"}],"termid":"GO:0035711"}


id: PATO:0001905
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The bearer of this quality has_part = n, where n is the normal amount for a comparable organism. Note that the bearer of the quality is the whole, not the part.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"has number of","termid":"PATO:0001555"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has normal numbers of parts of type","synonyms":[{"name":"having physical part","type":"exact"}],"termid":"PATO:0001905"}


id: PR:O94346
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1271.14 gene.","definition_xrefs":["UniProtKB:O94346","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine biosynthesis bifunctional protein ArgJ, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.14","synonyms":[{"name":"Spom972h-SPBC1271.14","type":"exact"}],"termid":"PR:O94346"}


id: FYPO:0003583
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of formation of foci containing the protein Sad1 is increased during a cellular response to DNA damage.","definition_xrefs":["PomBase:mah","PMID:24943839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased rate of Sad1 focus formation during response to DNA damage","synonyms":[{"name":"increased rate of Sad1 focus formation during response to DNA damage during mitotic cell cycle","type":"related"},{"name":"increased rate of Sad1 focus formation during response to DNA damage during vegetative growth","type":"exact"},{"name":"increased rate of accumulation of Sad1 foci during DNA damage response","type":"exact"}],"termid":"FYPO:0003583"}


id: SO:0000227
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding threonyl tRNA (SO:000270).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine_tRNA_primary_transcript","synonyms":[{"name":"threonine tRNA primary transcript","type":"exact"}],"termid":"SO:0000227"}


id: PBO:0068474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 52, pseudogene","termid":"PBO:0068474"}


id: MONDO:1010887
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronal ceroid lipofuscinosis that occurs in dogs due to a mutation in the CLN5 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, dog","termid":"MONDO:1011570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, CLN5-related, dog","secondary_identifiers":["OMIA:001482-9615"],"synonyms":[{"name":"CLN5","type":"exact"},{"name":"neuronal ceroid lipofuscinosis, 5, dog","type":"related"}],"termid":"MONDO:1010887","xrefs":{"Monarch":{"xref_id":"1010887"}}}


id: GO:0072061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the inner medullary collecting duct over time, from its formation to the mature structure. The inner medullary collecting duct is the portion of the collecting duct that lies in the renal inner medulla.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collecting duct development","termid":"GO:0072044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner medullary collecting duct development","termid":"GO:0072061"}


id: PBO:0082170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AdoMet-dependent proline methyltransferase; catalyzes the dimethylation of ribosomal proteins Rpl12 and Rps25 at N-terminal proline residues; has a role in protein synthesis; fusion protein localizes to the cytoplasm","termid":"PBO:0082170"}


id: FYPO:0003816
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell requires histidine or lysine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for histidine or lysine","synonyms":[{"name":"growth auxotrophic for histidine or lysine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for histidine or lysine during vegetative growth","type":"exact"},{"name":"growth auxotrophic for lysine or histidine","type":"exact"},{"name":"histidine or lysine auxotrophy","type":"exact"}],"termid":"FYPO:0003816"}


id: PBO:0052213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel regulator","termid":"PBO:0052213"}


id: GO:0003385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that mediates the transfer of information from one cell to another and contributes to the progression of an amphid sensory organ over time, from its formation to the mature state.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete cell-cell signaling involved in amphid sensory organ development (obsolete GO:0003385)","synonyms":[{"name":"cell-cell signalling involved in amphid sensory organ development","type":"exact"}],"termid":"GO:0003385"}


id: FYPO:0001445
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose measured in a cell is higher than normal when the cell is subject to heat shock.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular trehalose level during vegetative growth","termid":"FYPO:0001444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular trehalose level during heat shock","synonyms":[{"name":"increased cellular trehalose level during heat shock during mitotic cell cycle","type":"related"},{"name":"increased cellular trehalose level during vegetative growth and during heat shock","type":"exact"},{"name":"increased trehalose accumulation during heat shock","type":"related"}],"termid":"FYPO:0001445"}


id: MONDO:0007765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperostosis cranialis interna","secondary_identifiers":["MEDGEN:327093","HP:0005890","Orphanet:443098","OMIM:144755","MESH:C564168","UMLS:C1840404","GARD:17753"],"synonyms":[{"name":"HCIN","type":"related"},{"name":"hyperostosis cranalis interna","type":"exact"},{"name":"hyperostosis cranialis interna","type":"exact"},{"name":"hyperostosis cranialis interna (disease)","type":"exact"}],"termid":"MONDO:0007765","xrefs":{"Monarch":{"xref_id":"0007765"}}}


id: PBO:0042289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD2 cytoplasmic tail binding protein 2","termid":"PBO:0042289"}


id: SO:0000782
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a feature that occurs in nature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natural","termid":"SO:0000782"}


id: MONDO:0017377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Preaxial polydactyly-colobomata-intellectual disability syndrome is characterized by growth retardation, intellectual deficit, preaxial polydactyly and colobomatous anomalies. It has been described in one pair of sibs (brother and sister). The mode of transmission is thought to be autosomal recessive.","definition_xrefs":["Orphanet:2921"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preaxial polydactyly-colobomata-intellectual disability syndrome","secondary_identifiers":["MEDGEN:444110","GARD:4304","MESH:C537888","SCTID:733088002","UMLS:C2931655"],"synonyms":[{"name":"Pfeiffer Mayer syndrome","type":"related"},{"name":"Pfeiffer-Mayer syndrome","type":"exact"},{"name":"short stature intellectual disability type I preaxial polydactyly with colobomatous abnormalities","type":"related"},{"name":"short stature mental retardation type I preaxial polydactyly with colobomatous abnormalities","type":"related"}],"termid":"MONDO:0017377","xrefs":{"Monarch":{"xref_id":"0017377"}}}


id: PBO:0044508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytohesin 4","termid":"PBO:0044508"}


id: GO:0071488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a very low light intensity stimulus. A very low light intensity stimulus is defined as a level of electromagnetic radiation below 0.001 mmol/m2/sec.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to very low light intensity stimulus","termid":"GO:0055122"},{"relation_name":"is_a","term_name":"cellular response to light intensity","termid":"GO:0071484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to very low light intensity stimulus","termid":"GO:0071488"}


id: GO:1901363
data:
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