# terms

id: PBO:0111496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exon junction complex associated RNA-binding protein Rns1","termid":"PBO:0111496"}


id: PBO:0071918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S3 pseudogene 3","termid":"PBO:0071918"}


id: PBO:0089954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0642 conserved fungal protein","termid":"PBO:0089954"}


id: PBO:0046438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPM2A divergent transcript","termid":"PBO:0046438"}


id: PBO:0084907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondria protein of unknown function; interacts genetically with TOR1 to regulate chronological lifespan, and the response to both heat shock and oxidative stress; involved in maintaining the integrity of the mitochondrial network; negative regulator of mitophagy flux; non-tagged protein is detected in purified mitochondria in high-throughput studies; null mutant is viable and displays an elevated frequency of mitochondrial genome loss; similar to murine NOR1","termid":"PBO:0084907"}


id: PBO:0051430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-10","termid":"PBO:0051430"}


id: SO:0001268
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a small nuclear RNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"sncRNA_gene","termid":"SO:0002342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snRNA_gene","synonyms":[{"name":"small nuclear RNA gene","type":"exact"},{"name":"snRNA gene","type":"exact"}],"termid":"SO:0001268"}


id: SO:0000903
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Endogenous DNA sequence that are likely to have arisen from retroviruses.","direct_ancestors":[{"relation_name":"is_a","term_name":"proviral_location","termid":"SO:0000751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous_retroviral_sequence","synonyms":[{"name":"endogenous retroviral sequence","type":"exact"}],"termid":"SO:0000903"}


id: GO:0018008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The myristoylation of the N-terminal glycine of proteins to form the derivative N-myristoyl-glycine.","definition_xrefs":["RESID:AA0059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein myristoylation","termid":"GO:0006499"},{"relation_name":"is_a","term_name":"peptidyl-glycine modification","termid":"GO:0018201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042158"}],"interesting_parent_ids":["GO:0008150","GO:0042158"],"is_obsolete":false,"name":"N-terminal peptidyl-glycine N-myristoylation","synonyms":[{"name":"N-terminal peptidyl-glycine N-myristylation","type":"exact"}],"termid":"GO:0018008"}


id: PBO:0018086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-C ortholog Cnp3","termid":"PBO:0018086"}


id: GO:0102175
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-beta-hydroxysteroid-4-alpha-carboxylate + NAD+ = a 3-oxosteroid + CO2 + NADH.","definition_xrefs":["RHEA:34775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-beta-hydroxysteroid dehydrogenase [NAD(P)+]/C4-decarboxylase activity","termid":"GO:0000252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-beta-hydroxysteroid dehydrogenase (NAD+)/C4-decarboxylase activity","secondary_identifiers":["MetaCyc:RXN-11928","EC:1.1.1.418"],"termid":"GO:0102175"}


id: PBO:0060559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurobeachin pseudogene 3","termid":"PBO:0060559"}


id: PBO:0041131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 10 pseudogene 1","termid":"PBO:0041131"}


id: PR:O74331
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rlp1 gene.","definition_xrefs":["UniProtKB:O74331","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rlp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.11","synonyms":[{"name":"RecA-like protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rlp1","type":"exact"}],"termid":"PR:O74331"}


id: PBO:0027266
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-two_cell_divisions_prior_to_cell_cycle_arrest_in_mitotic_G1_phase_in_response_to_pheromone","termid":"PBO:0027266"}


id: PBO:0068540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 143, pseudogene","termid":"PBO:0068540"}


id: GO:1904620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dimethyl sulfoxide stimulus.","definition_xrefs":["PMID:12873812","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to dimethyl sulfoxide","termid":"GO:1904619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dimethyl sulfoxide","synonyms":[{"name":"cellular response to DMSO","type":"exact"}],"termid":"GO:1904620"}


id: PBO:0067623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 795, pseudogene","termid":"PBO:0067623"}


id: PBO:0067319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 405, pseudogene","termid":"PBO:0067319"}


id: GO:1905623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of leaf development.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11606552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of leaf development","termid":"GO:2000024"},{"relation_name":"positively_regulates","term_name":"leaf development","termid":"GO:0048366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of leaf development","synonyms":[{"name":"activation of leaf development","type":"narrow"},{"name":"up regulation of leaf development","type":"exact"},{"name":"up-regulation of leaf development","type":"exact"},{"name":"upregulation of leaf development","type":"exact"}],"termid":"GO:1905623"}


id: GO:0047687
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-ascorbate + H2O + O2 = L-threonate + 2 H+ + oxalate.","definition_xrefs":["EC:1.13.11.13"],"gene_count":0,"genotype_count":0,"name":"obsolete ascorbate 2,3-dioxygenase activity (obsolete GO:0047687)","synonyms":[{"name":"AAoxygenase activity","type":"exact"},{"name":"ascorbate 2,3-dioxygenase activity","type":"exact"},{"name":"ascorbate:oxygen 2,3-oxidoreductase (bond-cleaving)","type":"exact"}],"termid":"GO:0047687"}


id: PBO:0079790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A11, pseudogene","termid":"PBO:0079790"}


id: FYPO:0000713
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype in which the response to starvation for one or more nutrients is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to stress","termid":"FYPO:0000162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cellular response to starvation","synonyms":[{"name":"abnormal cellular response to depletion","type":"exact"},{"name":"abnormal cellular response to deprivation","type":"exact"}],"termid":"FYPO:0000713"}


id: GO:0140038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone reader that recognizes a histone H3 crotonylated at lysine 27.","definition_xrefs":["PMID:27105114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 reader activity","termid":"GO:0140006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140566"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0060090","GO:0140566","GO:0003674","GO:0030674"],"is_obsolete":false,"name":"histone H3K27cr reader activity","synonyms":[{"name":"H3K27cr modified histone binding","type":"narrow"}],"termid":"GO:0140038"}


id: GO:0007266
data:
  {"annotated_genes":["SJAG_03361","SJAG_04462"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99036],"is_not":false,"summary":null,"term":"GO:0007266"},{"annotations":[104836],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0035024"}]},"cv_name":"biological_process","definition":"An intracellular signaling cassette in which a small monomeric GTPase of the Rho subfamily relays a signal.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03361":null,"SJAG_04462":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Rho protein signal transduction","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Rho mediated signal transduction","type":"exact"}],"termid":"GO:0007266","terms_by_termid":{"GO:0007266":null,"GO:0035024":null}}


id: MOD:01474
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-[S-(carboxymethyl)phosphopantetheine]-L-serine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"O-phosphopantetheine-L-serine","termid":"MOD:00159"},{"relation_name":"is_a","term_name":"iodoacetic acid derivatized residue","termid":"MOD:00399"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-[S-(carboxymethyl)phosphopantetheine]-L-serine","termid":"MOD:01474"}


id: SO:0002249
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS region corresponding to a mature protein region of a polypeptide.","direct_ancestors":[{"relation_name":"is_a","term_name":"CDS_region","termid":"SO:0000851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mature_protein_region_of_CDS","synonyms":[{"name":"INSDC_feature:mat_peptide","type":"exact"},{"name":"mature protein region of CDS","type":"exact"}],"termid":"SO:0002249"}


id: PBO:0076357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin like 4","termid":"PBO:0076357"}


id: GO:0003254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of membrane depolarization. Membrane depolarization is the process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"membrane depolarization","termid":"GO:0051899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of membrane depolarization","termid":"GO:0003254"}


id: PBO:0113054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of COPI-mediated trafficking and tRNA nuclear export; enables Rna1p to access and activate Gsp1p-GTP bound to the export receptor tRNA complex during aminoacylation-dependent tRNA export; copurifies with tRNA export receptors; interacts with COPI coat proteins and regulates Golgi-to-ER trafficking; membrane fraction associated; mutations in members of the homologous human SCY1-like (SCYL) family of pseudokinases are linked to peripheral neuropathy, cerebellar atrophy, ataxia and ALS","termid":"PBO:0113054"}


id: PBO:0088263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIF complex alpha subunit Tfg1","termid":"PBO:0088263"}


id: GO:0060051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the glycosylation of one or more amino acid residues within a protein. Protein glycosylation is the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins.","definition_xrefs":["GOC:dms","GOC:dph","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glycoprotein biosynthetic process","termid":"GO:0010561"},{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of protein glycosylation","termid":"GO:0060049"},{"relation_name":"negatively_regulates","term_name":"protein glycosylation","termid":"GO:0006486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein glycosylation","synonyms":[{"name":"negative regulation of protein amino acid glycosylation","type":"exact"}],"termid":"GO:0060051"}


id: PBO:0003091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage factor complex subunit (predicted)","termid":"PBO:0003091"}


id: PBO:0056801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane frizzled-related protein","termid":"PBO:0056801"}


id: PBO:0001907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tryptophan-tRNA ligase Msw1 (predicted)","termid":"PBO:0001907"}


id: MOD:00542
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:186","PubMed:11698400","PubMed:11914093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyphenylglyoxal arginine","synonyms":[{"name":"HPG","type":"related"},{"name":"Hydroxyphenylglyoxal arginine","type":"related"}],"termid":"MOD:00542"}


id: MONDO:0023616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete familial leiomyomatosis (obsolete MONDO:0023616)","termid":"MONDO:0023616","xrefs":{"Monarch":{"xref_id":"0023616"}}}


id: PBO:0087313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Small subunit of the clathrin-associated adaptor complex AP-1; AP-1 is involved in protein sorting at the trans-Golgi network; homolog of the sigma subunit of the mammalian clathrin AP-1 complex","termid":"PBO:0087313"}


id: PBO:0066785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 83","termid":"PBO:0066785"}


id: PBO:0002799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk16 (predicted)","termid":"PBO:0002799"}


id: GO:0097173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of N-acetylmuramic acid (MurNAc), a monosaccharide derivative of N-acetylglucosamine.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"N-acetylmuramic acid metabolic process","termid":"GO:0097172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"N-acetylmuramic acid catabolic process","synonyms":[{"name":"N-acetylmuramate breakdown","type":"exact"},{"name":"N-acetylmuramate catabolic process","type":"exact"},{"name":"N-acetylmuramate catabolism","type":"exact"},{"name":"N-acetylmuramate degradation","type":"exact"},{"name":"N-acetylmuramic acid breakdown","type":"exact"},{"name":"N-acetylmuramic acid catabolism","type":"exact"},{"name":"N-acetylmuramic acid degradation","type":"exact"}],"termid":"GO:0097173"}


id: GO:0002192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process where translation initiation recruits the 40S ribosomal subunits via an internal ribosome entry segment (IRES) before an AUG codon is encountered in an appropriate sequence context to initiate linear mRNA translation.","definition_xrefs":["PMID:17284590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cap-independent translational initiation of linear mRNA","termid":"GO:0110017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0002181"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0002181","GO:0010467"],"is_obsolete":false,"name":"IRES-dependent translational initiation of linear mRNA","termid":"GO:0002192"}


id: PBO:0057704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1291","termid":"PBO:0057704"}


id: GO:0002099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a guanine in t position 34 of a tRNA is post-transcriptionally modified.","definition_xrefs":["GOC:hjd","ISBN:155581073X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA wobble base modification","termid":"GO:0002097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"tRNA wobble guanine modification","termid":"GO:0002099"}


id: MONDO:0056819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma arising from the nasal cavity or paranasal sinuses.","definition_xrefs":["NCIT:C54293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck carcinoma","termid":"MONDO:0002038"},{"relation_name":"is_a","term_name":"nasal cavity and paranasal sinus neoplasm","termid":"MONDO:0056820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"nasal cavity and paranasal sinus carcinoma","secondary_identifiers":["MEDGEN:328032","UMLS:C1710095"],"synonyms":[{"name":"nasal cavity and paranasal sinus cancer","type":"exact"},{"name":"nasal cavity and paranasal sinus carcinoma","type":"exact"},{"name":"paranasal sinus and nasal cavity cancer","type":"exact"},{"name":"sinonasal carcinoma","type":"exact"}],"termid":"MONDO:0056819","xrefs":{"Monarch":{"xref_id":"0056819"}}}


id: GO:0035810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the amount of urine excreted from the body over a unit of time.","definition_xrefs":["GOC:mtg_25march11","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of urine volume","termid":"GO:0035809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of urine volume","synonyms":[{"name":"diuresis","type":"broad"},{"name":"elevation of urinary volume","type":"exact"},{"name":"increase in urine flow","type":"exact"}],"termid":"GO:0035810"}


id: PBO:0091080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane organization protein, HVA22/TB2/DP1 family protein","termid":"PBO:0091080"}


id: PBO:0041647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit alpha2delta 2","termid":"PBO:0041647"}


id: GO:0106124
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membranes of a reservosome.","definition_xrefs":["PMID:15521631","PMID:19288526","PMID:22425988","PMID:12204365","GOC:ach","PMID:18452191","PMID:21818313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"reservosome","termid":"GO:0106123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005773","GO:0005575"],"is_obsolete":false,"name":"reservosome lumen","termid":"GO:0106124"}


id: PBO:0055218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2644","termid":"PBO:0055218"}


id: FYPO:0001056
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which L-arginine import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal amino acid import","termid":"FYPO:0001596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal arginine import","synonyms":[{"name":"normal L-arginine import","type":"exact"},{"name":"normal L-arginine import across plasma membrane","type":"exact"},{"name":"normal L-arginine uptake","type":"exact"},{"name":"normal arginine import during mitotic cell cycle","type":"related"},{"name":"normal arginine import during vegetative growth","type":"exact"},{"name":"normal arginine import into cell","type":"exact"}],"termid":"FYPO:0001056"}


id: PBO:0090977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory pathway protein Sec39","termid":"PBO:0090977"}


id: MONDO:0010606
data:
  {"annotated_genes":["SJAG_03088"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86274],"is_not":false,"summary":null,"term":"MONDO:0010606"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital diaphragmatic hernia","termid":"MONDO:0005711"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03088":null},"genotype_count":0,"is_obsolete":false,"name":"hernia, anterior diaphragmatic","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15295","MESH:C564413","MEDGEN:334881","OMIM:306950","UMLS:C1844025"],"synonyms":[{"name":"hernia, anterior diaphragmatic","type":"exact"}],"termid":"MONDO:0010606","terms_by_termid":{"MONDO:0010606":null},"xrefs":{"Monarch":{"xref_id":"0010606"}}}


id: PATO:0000955
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fertility quality inhering in a bearer by virtue of the bearer's being capable of initiating, sustaining, or supporting reproduction.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fertility","termid":"PATO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fertile","termid":"PATO:0000955"}


id: PBO:0040098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosyltransferase 4 (inactive) (Dombrock blood group)","termid":"PBO:0040098"}


id: PBO:0064373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase, mitochondrial processing subunit alpha","termid":"PBO:0064373"}


id: PBO:0113299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in aromatic amino acid biosynthesis; up-regulated following GCN4 induction, amino acid starvation, rapamycin treatment in GCN4-dependent manner; promoter contains Gcn4 control response element, which is bound by Gcn4p in vivo","termid":"PBO:0113299"}


id: GO:0160032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein activation cascade that generates the active Toll receptor ligand and consists of the cascade of enzymatic reactions initiated by extracellular recognition factors, leading to the cleavage of the inactive form of spatzle family of ligands.","definition_xrefs":["PMID:23632253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein activation cascade","termid":"GO:0072376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"Toll receptor ligand protein activation cascade","termid":"GO:0160032"}


id: PBO:0002227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomannomutase Pmm1","termid":"PBO:0002227"}


id: MONDO:0018763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"tubulinopathy","termid":"MONDO:0100153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"tubulinopathy-associated dysgyria","secondary_identifiers":["MEDGEN:1800273","Orphanet:467166","GARD:21944","UMLS:C5568850"],"synonyms":[{"name":"brain stem asymmetry-superior cerebellar and basal ganglia dysplasia syndrome","type":"exact"}],"termid":"MONDO:0018763","xrefs":{"Monarch":{"xref_id":"0018763"}}}


id: GO:0072392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phenol, a compound that consists of a benzene ring with one attached hydroxyl group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"phenol metabolic process","termid":"GO:0072390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenol catabolic process","termid":"GO:0072392"}


id: PBO:0059717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 25","termid":"PBO:0059717"}


id: PBO:0017446
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pathogen_of","termid":"PBO:0017446"}


id: PBO:0002697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoinositide phospholipase C Plc1","termid":"PBO:0002697"}


id: PBO:0062263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily E member 1 pseudogene","termid":"PBO:0062263"}


id: GO:0071970
data:
  {"annotated_genes":["SJAG_01290","SJAG_01288","SJAG_02222","SJAG_05285","SJAG_04483","SJAG_03587","SJAG_04771","SJAG_00876","SJAG_01835","SJAG_00218","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87544,91068,91079,105592,107264,108792,112657,115316],"is_not":false,"summary":null,"term":"GO:0071970"},{"annotations":[93948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[91904,86996],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds, found in fungal cell walls.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall (1->3)-beta-D-glucan biosynthetic process","termid":"GO:0034411"},{"relation_name":"is_a","term_name":"fungal-type cell wall beta-glucan biosynthetic process","termid":"GO:0070880"},{"relation_name":"is_a","term_name":"fungal-type cell wall (1->3)-beta-D-glucan metabolic process","termid":"GO:0071969"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00876":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044085","GO:0071554"],"is_obsolete":false,"name":"fungal-type cell wall (1->3)-beta-D-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fungal-type cell wall 1,3-beta-D-glucan biosynthetic process","type":"exact"},{"name":"fungal-type cell wall 1,3-beta-glucan anabolism","type":"exact"},{"name":"fungal-type cell wall 1,3-beta-glucan biosynthesis","type":"exact"},{"name":"fungal-type cell wall 1,3-beta-glucan formation","type":"exact"},{"name":"fungal-type cell wall 1,3-beta-glucan synthesis","type":"exact"},{"name":"fungal-type cell wall beta-1,3-glucan anabolism","type":"exact"},{"name":"fungal-type cell wall beta-1,3-glucan biosynthesis","type":"exact"},{"name":"fungal-type cell wall beta-1,3-glucan biosynthetic process","type":"exact"},{"name":"fungal-type cell wall beta-1,3-glucan formation","type":"exact"},{"name":"fungal-type cell wall beta-1,3-glucan synthesis","type":"exact"}],"termid":"GO:0071970","terms_by_termid":{"GO:0034413":null,"GO:0071970":null,"GO:0140748":null}}


id: MONDO:0041295
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of kidney papillary necrosis.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney papillary necrosis","termid":"MONDO:0006821"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"acute papillary necrosis","secondary_identifiers":["SCTID:270494003","UMLS:C0403468","MEDGEN:588410"],"synonyms":[{"name":"acute kidney papillary necrosis","type":"exact"},{"name":"acute necrotizing papillitis","type":"related"},{"name":"acute papillary necrosis","type":"exact"},{"name":"acute renal medullary necrosis","type":"related"},{"name":"kidney papillary necrosis, acute","type":"exact"}],"termid":"MONDO:0041295","xrefs":{"Monarch":{"xref_id":"0041295"}}}


id: GO:0032486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette in which a small monomeric GTPase of the Rap subfamily relays a signal.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Rap protein signal transduction","termid":"GO:0032486"}


id: MONDO:0015334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete branchial arch or oral-acral syndrome (obsolete MONDO:0015334)","secondary_identifiers":["Orphanet:139036"],"termid":"MONDO:0015334","xrefs":{"Monarch":{"xref_id":"0015334"}}}


id: MONDO:1012042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar abiotrophy, non-human animal","termid":"MONDO:1011834"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar abiotrophy, goat","secondary_identifiers":["OMIA:000175-9925"],"termid":"MONDO:1012042","xrefs":{"Monarch":{"xref_id":"1012042"}}}


id: PBO:0085714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein Involved in spore wall assembly; localizes to lipid droplets found on or outside of the prospore membrane; shares similarity with Lds2p and Rrt8p, and a strain mutant for all 3 genes exhibits reduced dityrosine fluorescence relative to the single mutants","termid":"PBO:0085714"}


id: MONDO:0016312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"5-fluorouracil (5-FU) poisoning is a rare intoxication caused by the prolonged, low-dose administration of 5-FU, which is the mainstay of both adjuvant and advanced-disease chemotherapy regimens in colon cancer. 5-FU poisoning is characterized by gastrointestinal (nausea, emesis, diarrhea, anorexia, stomatitis) and hematologic (myelosuppression) toxicities as well as mucositis, alopecia and, occasionally, palmar-plantar dysesthesia (more commonly known as hand-foot syndrome). Women have been reported to experience more 5-FU-related toxicity than men.","definition_xrefs":["Orphanet:217064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemotherapy-induced toxicity","termid":"MONDO:0800390"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-fluorouracil poisoning","secondary_identifiers":["MESH:C531667"],"synonyms":[{"name":"5-fluorouracil intoxication","type":"exact"}],"termid":"MONDO:0016312","xrefs":{"Monarch":{"xref_id":"0016312"}}}


id: MONDO:0016395
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"foveal hypoplasia-presenile cataract syndrome","secondary_identifiers":["Orphanet:2253","MEDGEN:419129","UMLS:C2931644","GARD:406","MESH:C537858"],"synonyms":[{"name":"O'Donnell-Pappas syndrome","type":"exact"}],"termid":"MONDO:0016395","xrefs":{"Monarch":{"xref_id":"0016395"}}}


id: PBO:0071165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 4","termid":"PBO:0071165"}


id: PBO:0054751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2161","termid":"PBO:0054751"}


id: MONDO:0024345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pityriasis streptogenes (obsolete MONDO:0024345)","secondary_identifiers":["SCTID:200994002","ICD9:696.5"],"termid":"MONDO:0024345","xrefs":{"Monarch":{"xref_id":"0024345"}}}


id: GO:0102037
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + 4-nitrotoluene + NADH + O2 = 4-nitrobenzyl alcohol + NAD+ + H2O.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-nitrotoluene monooxygenase activity","secondary_identifiers":["MetaCyc:R361-RXN"],"termid":"GO:0102037"}


id: PBO:0045832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 22","termid":"PBO:0045832"}


id: PR:Q9P7R5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gfh1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7R5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-tubulin complex component gfh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC211.06","synonyms":[{"name":"Spom972h-gfh1","type":"exact"},{"name":"gcp4 homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7R5"}


id: GO:0030867
data:
  {"annotated_genes":["SJAG_00175","SJAG_00360","SJAG_00959","SJAG_02330","SJAG_02354","SJAG_02588","SJAG_03955","SJAG_02208","SJAG_00064","SJAG_01558"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97541,107794,108823,105658],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005784"},{"annotations":[109120,95221,109896,90063],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031207"},{"annotations":[109245,93763],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005785"},{"annotations":[97542],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071261"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding the rough endoplasmic reticulum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"rough endoplasmic reticulum","termid":"GO:0005791"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00175":null,"SJAG_00360":null,"SJAG_00959":null,"SJAG_01558":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02354":null,"SJAG_02588":null,"SJAG_03955":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005783","GO:0005789"],"is_obsolete":false,"name":"rough endoplasmic reticulum membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao3089754107"],"synonyms":[{"name":"RER membrane","type":"exact"},{"name":"rough ER membrane","type":"exact"}],"termid":"GO:0030867","terms_by_termid":{"GO:0005784":null,"GO:0005785":null,"GO:0031207":null,"GO:0071261":null}}


id: FYPO:0004490
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more transport RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Transport RNAs are transcribed from genes whose products are involved in one or more transport processes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased level of transport gene mRNA during vegetative growth","synonyms":[{"name":"increased level of transport gene RNA during vegetative growth","type":"exact"},{"name":"increased level of transport gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of transport gene transcripts during vegetative growth","type":"exact"},{"name":"increased transport gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0004490"}


id: GO:0070444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of oligodendrocyte progenitor cells by cell division, resulting in the expansion of their population. Oligodendrocyte progenitors give rise to oligodendrocytes, which form the insulating myelin sheath of axons in the central nervous system.","definition_xrefs":["GOC:mah","PMID:15504915","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural precursor cell proliferation","termid":"GO:0061351"},{"relation_name":"part_of","term_name":"gliogenesis","termid":"GO:0042063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oligodendrocyte progenitor proliferation","synonyms":[{"name":"oligodendrocyte precursor proliferation","type":"exact"}],"termid":"GO:0070444"}


id: GO:1904820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a peritoneum over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GO_REF:0000094","GOC:TermGenie","PMID:15840053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serous membrane development","termid":"GO:1904817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peritoneum development","synonyms":[{"name":"peritonaeum development","type":"related"}],"termid":"GO:1904820"}


id: MONDO:0100414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly CEBPA gene mutation. (Mutation of the CEBPA gene encoding CCAAT/enhancer binding protein alpha. It is seen in acute myeloid leukemias usually associated with a normal karyotype.)","definition_xrefs":["NCIT:C38372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"acute myeloid leukemia, CEBPA gene mutation","secondary_identifiers":["NCIT:C151898"],"synonyms":[{"name":"AML, C/EBP-Alpha Gene Mutation","type":"exact"},{"name":"AML, C/EBPalpha Mutation","type":"exact"},{"name":"AML, CCAAT Enhancer Binding Protein Alpha Gene Mutation","type":"exact"},{"name":"AML, CCAAT/Enhancer Binding Protein, Alpha Gene Mutation","type":"exact"},{"name":"AML, CEBP Gene Mutation","type":"exact"},{"name":"AML, CEBPA Mutation","type":"exact"},{"name":"AML, CEBPA gene mutation","type":"exact"}],"termid":"MONDO:0100414","xrefs":{"Monarch":{"xref_id":"0100414"}}}


id: PBO:0005327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Shk1 kinase binding protein 5","termid":"PBO:0005327"}


id: GO:1902374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of rRNA catabolic process.","definition_xrefs":["GOC:bf","PMID:20160119","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"},{"relation_name":"regulates","term_name":"rRNA catabolic process","termid":"GO:0016075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of rRNA catabolic process","synonyms":[{"name":"regulation of rRNA breakdown","type":"exact"},{"name":"regulation of rRNA catabolism","type":"exact"},{"name":"regulation of rRNA degradation","type":"exact"}],"termid":"GO:1902374"}


id: GO:1900121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a protein or other molecule binding to a receptor.","definition_xrefs":["GOC:signaling","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein binding","termid":"GO:0032091"},{"relation_name":"is_a","term_name":"regulation of receptor binding","termid":"GO:1900120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of receptor binding","synonyms":[{"name":"down regulation of receptor binding","type":"exact"},{"name":"down regulation of receptor-associated protein activity","type":"related"},{"name":"down-regulation of receptor binding","type":"exact"},{"name":"downregulation of receptor binding","type":"exact"},{"name":"inhibition of receptor binding","type":"narrow"},{"name":"inhibition of receptor ligand","type":"narrow"}],"termid":"GO:1900121"}


id: PBO:0083257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; large scale expression analysis showed an increase in mRNA accumulation in strains mutant for exosome components","termid":"PBO:0083257"}


id: MONDO:0011772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"B4GALT1-CDG is a congenital disorder of glycosylation characterized by macrocephaly due to Dandy-Walker malformation, hydrocephaly, hypotonia, myopathy and coagulation anomalies. To date, only one case has been reported. The syndrome is associated with mutations in the GALT1 gene (localized to region q13 of chromosome 9) leading to a deficiency in the Golgi apparatus enzyme beta-1,4-galactosyl transferase.","definition_xrefs":["Orphanet:79332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"disorder of multiple glycosylation","termid":"MONDO:0017749"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0020022","MONDO:0024322","MONDO:0005066","MONDO:0002320"],"is_obsolete":false,"name":"B4GALT1-congenital disorder of glycosylation","secondary_identifiers":["DOID:0070256","SCTID:725587007","UMLS:C2931009","MEDGEN:419310","OMIM:607091","MESH:C535753","GARD:9841"],"synonyms":[{"name":"B4GALT1-CDG","type":"exact"},{"name":"B4GALT1-CDG (CDG-IId)","type":"related"},{"name":"B4GALT1-congenital disorder of glycosylation","type":"exact"},{"name":"Beta-1,4-galactosyltransferase deficiency","type":"exact"},{"name":"CDG 2D","type":"related"},{"name":"CDG IId","type":"related"},{"name":"CDG syndrome type IId","type":"exact"},{"name":"CDG-IId","type":"exact"},{"name":"CDG2D","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type IId","type":"exact"},{"name":"congenital disorder of glycosylation type 2d","type":"exact"},{"name":"congenital disorder of glycosylation type IId","type":"exact"},{"name":"congenital disorder of glycosylation, type IId","type":"related"}],"termid":"MONDO:0011772","xrefs":{"Monarch":{"xref_id":"0011772"}}}


id: GO:0034042
data:
  {"annotated_genes":["SJAG_03724"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95632],"is_not":false,"summary":null,"term":"GO:0034042"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of 5-formyluracil bases by cleaving the N-C1' glycosidic bond between the oxidized pyrimidine and the deoxyribose sugar.","definition_xrefs":["PMID:17641464","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity","termid":"GO:0000703"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0140097","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"5-formyluracil DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"5-foU DNA N-glycosylase activity","type":"exact"}],"termid":"GO:0034042","terms_by_termid":{"GO:0034042":null}}


id: PBO:0038623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetylcholinesterase (Cartwright blood group)","termid":"PBO:0038623"}


id: FYPO:0000304
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000087"},{"annotations":[118597,118609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000726"},{"annotations":[118596,118608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000271"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a stress. Typically, a cell population is deemed sensitive to a stress if cells in the population stop growing (and may die) when exposed to the stress at an intensity that allows a population of wild type cells to grow and divide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell population growth phenotype","termid":"FYPO:0001358"},{"relation_name":"is_a","term_name":"sensitive to stress","termid":"FYPO:0002549"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null,"SJAG_04312":null},"genotype_count":3,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to stress during vegetative growth","references_by_uniquename":{"PMID:27678009":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_04312","SJAG_02592","SJAG_00266"],"single_locus_genotype_uniquenames":["pka1delta","sty1delta","atf1delta"],"synonyms":[{"name":"decreased growth during cellular response to stress during vegetative growth","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to stress during vegetative growth","type":"exact"},{"name":"hypersensitive to stress during vegetative growth","type":"exact"},{"name":"sensitive to stress during mitotic cell cycle","type":"related"},{"name":"stress resistance: decreased during vegetative growth","type":"related"}],"termid":"FYPO:0000304","terms_by_termid":{"FYECO:0000078":null,"FYECO:0000207":null,"FYPO:0000087":null,"FYPO:0000271":null,"FYPO:0000726":null,"FYPO_EXT:0000001":null}}


id: MONDO:0008930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"celiac disease, susceptibility to, 1","secondary_identifiers":["MEDGEN:395227","OMIM:212750","UMLS:C1859310"],"synonyms":[{"name":"CELIAC1","type":"related"},{"name":"celiac disease, susceptibility to","type":"exact"},{"name":"celiac disease, susceptibility to, 1","type":"exact"},{"name":"celiac disease, susceptibility to, type 1","type":"exact"},{"name":"celiac sprue, susceptibility to, 1","type":"related"},{"name":"coeliac disease, susceptibility to","type":"exact"},{"name":"coeliac disease, susceptibility to, type 1","type":"exact"},{"name":"coeliac sprue, susceptibility to, 1","type":"related"},{"name":"gluten-sensitive enteropathy, susceptibility to, 1","type":"related"},{"name":"susceptibility to celiac disease 1","type":"related"},{"name":"susceptibility to coeliac disease 1","type":"related"}],"termid":"MONDO:0008930","xrefs":{"Monarch":{"xref_id":"0008930"}}}


id: GO:0070200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in the telomeric region of a chromosome.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromosome, telomeric region","termid":"GO:0070198"},{"relation_name":"is_a","term_name":"establishment of protein localization to chromosome","termid":"GO:0070199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of protein localization to telomere","synonyms":[{"name":"establishment of protein localisation to telomere","type":"exact"},{"name":"establishment of protein localization to chromosome, telomeric region","type":"exact"}],"termid":"GO:0070200"}


id: PBO:0057613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1179","termid":"PBO:0057613"}


id: MONDO:0006579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, darkly pigmented skin lesion characterized by proliferation of keratinocytes and melanocytes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"seborrheic keratosis","termid":"MONDO:0008420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"melanoacanthoma","secondary_identifiers":["DOID:11684","NCIT:C27548","EFO:1000733","UMLS:C1321683","SCTID:394727000","Wikipedia:Melanocanthoma","MEDGEN:272110"],"termid":"MONDO:0006579","xrefs":{"Monarch":{"xref_id":"0006579"}}}


id: PBO:0005744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf21","termid":"PBO:0005744"}


id: MONDO:0956997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An IDH-mutant, and 1p/19q-codeleted oligodendroglioma that is characterized as grade 3 tumors associated with a more rapid growth. Grade 3 tumors appear to have abnormalities on chromosomes 9 or 10, along with unusual amounts of growth factors and proteins, which are thought to contribute to the more rapid growth of these gliomas.","definition_xrefs":["DOID:0081282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IDH-mutant and 1p/19q-codeleted oligodendroglioma","termid":"MONDO:0859592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"oligodendroglioma, IDH-mutant and 1p/19q-codeleted, grade 3","termid":"MONDO:0956997","xrefs":{"Monarch":{"xref_id":"0956997"}}}


id: MONDO:0000192
data:
  {"annotated_genes":["SJAG_03150","SJAG_03149"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86215,86216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014526"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03149":null,"SJAG_03150":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"polyglucosan body myopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:615895"],"termid":"MONDO:0000192","terms_by_termid":{"MONDO:0014526":null},"xrefs":{"Monarch":{"xref_id":"0000192"}}}


id: MOD:00733
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with an N-acetylglucosamine group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylhexosaminylated residue","termid":"MOD:00436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N-acetylaminoglucosylated","synonyms":[{"name":"GlcNAc","type":"exact"}],"termid":"MOD:00733"}


id: GO:0050367
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginine + L-tyrosine + ATP = L-tyrosyl-L-arginine + AMP + diphosphate + 2 H+.","definition_xrefs":["RHEA:15345","EC:6.3.2.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"tyrosine-arginine ligase activity","secondary_identifiers":["MetaCyc:TYROSINE--ARGININE-LIGASE-RXN","KEGG_REACTION:R00735"],"synonyms":[{"name":"L-tyrosine:L-arginine ligase (AMP-forming)","type":"related"},{"name":"kyotorphin synthase activity","type":"related"},{"name":"kyotorphin synthetase activity","type":"related"},{"name":"kyotorphin-synthesizing enzyme activity","type":"related"},{"name":"tyrosyl-arginine synthase activity","type":"related"}],"termid":"GO:0050367"}


id: PBO:0047627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXO induced long non-coding RNA 1","termid":"PBO:0047627"}


id: GO:0031356
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the chloroplast inner membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of chloroplast inner membrane (obsolete GO:0031356)","synonyms":[{"name":"intrinsic to chloroplast inner membrane","type":"narrow"}],"termid":"GO:0031356"}


id: GO:0031969
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the lipid bilayers that surround a chloroplast and form the chloroplast envelope.","definition_xrefs":["GOC:pz","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"},{"relation_name":"part_of","term_name":"chloroplast envelope","termid":"GO:0009941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chloroplast membrane","secondary_identifiers":["Wikipedia:Chloroplast_membrane"],"termid":"GO:0031969"}


id: PBO:0067127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 173, pseudogene","termid":"PBO:0067127"}


id: MOD:00876
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a hexosamine sugar group through a glycosidic bond.","definition_xrefs":["Unimod:454"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"hexosaminylated residue","synonyms":[{"name":"HexN","type":"related"},{"name":"Hexosamine","type":"related"},{"name":"Hexosamines (GalN, GlcN)","type":"exact"}],"termid":"MOD:00876"}


id: PBO:0068399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 216 pseudogene 1","termid":"PBO:0068399"}


id: GO:0036291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The phosphorylation by a protein of one or more of its own amino acid residues.","definition_xrefs":["GOC:jsg","PMID:9201908"],"gene_count":0,"genotype_count":0,"name":"obsolete protein cis-autophosphorylation (obsolete GO:0036291)","synonyms":[{"name":"cis-autophosphorylation","type":"exact"}],"termid":"GO:0036291"}


id: GO:0042128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The nitrogen metabolic process that encompasses the uptake of nitrate from the environment and reduction to ammonia, and results in the incorporation of nitrogen derived from nitrate into cellular substances.","definition_xrefs":["GOC:mah","GOC:das","PMID:8122899","PMID:10542156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrate metabolic process","termid":"GO:0042126"},{"relation_name":"is_a","term_name":"nitrogen cycle metabolic process","termid":"GO:0071941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071941"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0071941","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"nitrate assimilation","secondary_identifiers":["MetaCyc:PWY-381"],"synonyms":[{"name":"assimilatory nitrate reduction","type":"exact"}],"termid":"GO:0042128"}


id: PBO:0080325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 89 pseudogene","termid":"PBO:0080325"}


id: FYPO:0005462
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule-based movement occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule-based movement during vegetative growth","termid":"FYPO:0005461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased microtubule-based movement during vegetative growth","synonyms":[{"name":"decreased microtubule-based movement during mitotic cell cycle","type":"related"},{"name":"reduced microtubule-based movement during vegetative growth","type":"exact"}],"termid":"FYPO:0005462"}


id: GO:0051131
data:
  {"annotated_genes":["SJAG_01545","SJAG_03784","SJAG_00984"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92750,96245,100383],"is_not":false,"summary":null,"term":"GO:0051131"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a protein complex, mediated by chaperone molecules that do not form part of the finished complex.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00984":null,"SJAG_01545":null,"SJAG_03784":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"chaperone-mediated protein complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0034619"],"synonyms":[{"name":"cellular chaperone-mediated protein complex assembly","type":"exact"},{"name":"chaperone activity","type":"related"},{"name":"protein complex assembly, multichaperone pathway","type":"exact"}],"termid":"GO:0051131","terms_by_termid":{"GO:0051131":null}}


id: PBO:0080596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 26","termid":"PBO:0080596"}


id: PBO:0040394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit E1 pseudogene 2","termid":"PBO:0040394"}


id: MONDO:0004050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An osteosarcoma usually arising from the metaphysis of long bones. It is characterized by the presence of a cystic architecture with blood-filled spaces. The prognosis is similar to that of conventional osteosarcoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"conventional osteosarcoma","termid":"MONDO:0002631"},{"relation_name":"is_a","term_name":"bone osteosarcoma","termid":"MONDO:0002629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"telangiectatic osteogenic sarcoma","secondary_identifiers":["DOID:6951","NCIT:C3902","ICDO:9183/3","ONCOTREE:TEOS","UMLS:C0259782","MEDGEN:78059"],"synonyms":[{"name":"TEOS","type":"related"},{"name":"malignant bone aneurysm","type":"exact"},{"name":"telangiectatic osteosarcoma","type":"exact"},{"name":"telangiectatic osteosarcoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0004050","xrefs":{"Monarch":{"xref_id":"0004050"}}}


id: PATO:0002301
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that has a value that is decreased compared to normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"deviation(from_normal)","termid":"PATO:0000069"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased quality","termid":"PATO:0002301"}


id: GO:0032271
data:
  {"annotated_genes":["SJAG_04479","SJAG_04100","SJAG_02700","SJAG_03086","SJAG_00279","SJAG_00521","SJAG_02566","SJAG_01894","SJAG_01993"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98398,91809,113813,87732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[101248,102243,90158,104660,89304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030833"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the process of creating protein polymers.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"protein polymerization","termid":"GO:0051258"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_04100":null,"SJAG_04479":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of protein polymerization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of protein polymerisation","type":"exact"}],"termid":"GO:0032271","terms_by_termid":{"GO:0030833":null,"GO:0051016":null}}


id: PBO:0116412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 family protein 7","termid":"PBO:0116412"}


id: GO:0000981
data:
  {"annotated_genes":["SJAG_03519","SJAG_02730","SJAG_00124","SJAG_04009","SJAG_05153","SJAG_02252","SJAG_00386","SJAG_04036","SJAG_00664","SJAG_02938","SJAG_02810","SJAG_02052","SJAG_00163","SJAG_01916","SJAG_06599","SJAG_04813","SJAG_04855","SJAG_03911","SJAG_03735","SJAG_03538","SJAG_00987","SJAG_01583","SJAG_02472","SJAG_05234","SJAG_03473","SJAG_01725","SJAG_04374","SJAG_03388","SJAG_00037","SJAG_03879","SJAG_01441","SJAG_05343","SJAG_01740","SJAG_02218","SJAG_01930","SJAG_04421","SJAG_00698","SJAG_02138","SJAG_03918","SJAG_02048","SJAG_02752","SJAG_00266","SJAG_01343","SJAG_00693","SJAG_01307","SJAG_00304","SJAG_00926","SJAG_05006","SJAG_02709","SJAG_02149","SJAG_02406","SJAG_01694","SJAG_04191","SJAG_00210","SJAG_06576","SJAG_04839","SJAG_05288","SJAG_03143","SJAG_03346","SJAG_00802","SJAG_05247","SJAG_01062","SJAG_04712","SJAG_03183","SJAG_03241","SJAG_04249","SJAG_02311","SJAG_04584","SJAG_02956","SJAG_04092","SJAG_00979","SJAG_01243","SJAG_02569","SJAG_04388","SJAG_02326","SJAG_03484","SJAG_04749","SJAG_00792","SJAG_05337"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57114,65940,87877,91951,92235,92725,95180,95530,96067,96418,96548,96867,97019,97020,97021,97022,97023,99622,100988,101549,101732,102201,103057,103950,103956,105602,107710,108124,108844,110217,110358,110375,110391,110550,112901,114329,115131,116105,117851],"is_not":false,"summary":null,"term":"GO:0000981"},{"annotations":[97921,110216,106544,113179,92234,95774,87507,87072,101783,116987,88517,96790,87436,91399,108678,113582,104277,103949,107466,95179,92781,107068,88268,114078,105334,111413,115572,93198,108295,88942,99308,87933,111374,111414,117565,108537,94228,108679,115969,109186,97606,99004,105601,99996,89575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001228"},{"annotations":[108296,94211,93547,105745,115573,103951,79923,92782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001227"}]},"cv_name":"molecular_function","definition":"A DNA-binding transcription factor activity that modulates the transcription of specific gene sets transcribed by RNA polymerase II.","definition_xrefs":["GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription factor activity","termid":"GO:0003700"}],"gene_count":79,"genes_by_uniquename":{"SJAG_00037":null,"SJAG_00124":null,"SJAG_00163":null,"SJAG_00210":null,"SJAG_00266":null,"SJAG_00304":null,"SJAG_00386":null,"SJAG_00664":null,"SJAG_00693":null,"SJAG_00698":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00926":null,"SJAG_00979":null,"SJAG_00987":null,"SJAG_01062":null,"SJAG_01243":null,"SJAG_01307":null,"SJAG_01343":null,"SJAG_01441":null,"SJAG_01583":null,"SJAG_01694":null,"SJAG_01725":null,"SJAG_01740":null,"SJAG_01916":null,"SJAG_01930":null,"SJAG_02048":null,"SJAG_02052":null,"SJAG_02138":null,"SJAG_02149":null,"SJAG_02218":null,"SJAG_02252":null,"SJAG_02311":null,"SJAG_02326":null,"SJAG_02406":null,"SJAG_02472":null,"SJAG_02569":null,"SJAG_02709":null,"SJAG_02730":null,"SJAG_02752":null,"SJAG_02810":null,"SJAG_02938":null,"SJAG_02956":null,"SJAG_03143":null,"SJAG_03183":null,"SJAG_03241":null,"SJAG_03346":null,"SJAG_03388":null,"SJAG_03473":null,"SJAG_03484":null,"SJAG_03519":null,"SJAG_03538":null,"SJAG_03735":null,"SJAG_03879":null,"SJAG_03911":null,"SJAG_03918":null,"SJAG_04009":null,"SJAG_04036":null,"SJAG_04092":null,"SJAG_04191":null,"SJAG_04249":null,"SJAG_04374":null,"SJAG_04388":null,"SJAG_04421":null,"SJAG_04584":null,"SJAG_04712":null,"SJAG_04749":null,"SJAG_04813":null,"SJAG_04839":null,"SJAG_04855":null,"SJAG_05006":null,"SJAG_05153":null,"SJAG_05234":null,"SJAG_05247":null,"SJAG_05288":null,"SJAG_05337":null,"SJAG_05343":null,"SJAG_06576":null,"SJAG_06599":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003700"},{"rel_name":"is_a","termid":"GO:0140110"}],"interesting_parent_ids":["GO:0003674","GO:0140110","GO:0003700"],"is_obsolete":false,"name":"DNA-binding transcription factor activity, RNA polymerase II-specific","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000024":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0001203","GO:0001202","GO:0003705","GO:0000982","GO:0001200","GO:0001201","GO:0001133"],"synonyms":[{"name":"RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity","type":"narrow"},{"name":"RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity","type":"narrow"},{"name":"RNA polymerase II transcription factor activity, copper ion regulated core promoter proximal region sequence-specific binding","type":"narrow"},{"name":"RNA polymerase II transcription factor activity, copper ion regulated proximal promoter sequence-specific DNA binding","type":"narrow"},{"name":"RNA polymerase II transcription factor activity, metal ion regulated core promoter proximal region sequence-specific binding","type":"narrow"},{"name":"RNA polymerase II transcription factor activity, metal ion regulated proximal promoter sequence-specific DNA binding","type":"narrow"},{"name":"RNA polymerase II transcription factor activity, metal ion regulated sequence-specific DNA binding","type":"narrow"},{"name":"RNA polymerase II transcription factor activity, sequence-specific DNA binding","type":"exact"},{"name":"RNA polymerase II transcription factor activity, sequence-specific transcription regulatory region DNA binding","type":"exact"},{"name":"RNA polymerase II transcription factor activity, zinc ion regulated core promoter proximal region sequence-specific DNA binding","type":"narrow"},{"name":"RNA polymerase II transcription factor activity, zinc ion regulated proximal promoter sequence-specific DNA binding","type":"narrow"},{"name":"copper ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity","type":"narrow"},{"name":"metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity","type":"narrow"},{"name":"metal ion regulated sequence-specific DNA binding RNA polymerase II transcription factor activity","type":"narrow"},{"name":"sequence-specific DNA binding RNA polymerase II transcription factor activity","type":"exact"},{"name":"sequence-specific distal enhancer binding RNA polymerase II transcription factor activity","type":"narrow"},{"name":"sequence-specific transcription regulatory region DNA binding RNA polymerase II transcription factor recruiting transcription factor activity","type":"related"},{"name":"transcription factor","type":"broad"},{"name":"transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding","type":"narrow"},{"name":"transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding","type":"narrow"},{"name":"transcription factor activity, RNA polymerase II proximal promoter sequence-specific DNA binding","type":"narrow"},{"name":"zinc ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity","type":"narrow"}],"termid":"GO:0000981","terms_by_termid":{"GO:0000981":null,"GO:0001227":null,"GO:0001228":null}}


id: MONDO:0009057
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyanosis and hepatic disease","secondary_identifiers":["MEDGEN:387820","MESH:C565660","UMLS:C1857443","OMIM:219400"],"synonyms":[{"name":"cyanosis and hepatic disease","type":"exact"}],"termid":"MONDO:0009057","xrefs":{"Monarch":{"xref_id":"0009057"}}}


id: MONDO:0009703
data:
  {"annotated_genes":["SJAG_01937"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84549],"is_not":false,"summary":null,"term":"MONDO:0009703"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01937":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy with abnormal lipid metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4310822","MEDGEN:934789","SCTID:240095001","OMIM:255100","MESH:C562935"],"synonyms":[{"name":"LIPID storage myopathy due to flavin adenine dinucleotide synthetase deficiency","type":"related"},{"name":"LSMFLAD","type":"related"},{"name":"lipid storage myopathy","type":"related"},{"name":"lipid storage myopathy due to flavin adenine dinucleotide synthetase deficiency","type":"related"},{"name":"myopathy with abnormal lipid metabolism","type":"exact"}],"termid":"MONDO:0009703","terms_by_termid":{"MONDO:0009703":null},"xrefs":{"Monarch":{"xref_id":"0009703"}}}


id: GO:0030209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dermatan sulfate, any of a group of glycosaminoglycans with repeats consisting of beta-(1,4)-linked L-iduronyl-beta-(1,3)-N-acetyl-D-galactosamine 4-sulfate units.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan catabolic process","termid":"GO:0006027"},{"relation_name":"is_a","term_name":"dermatan sulfate metabolic process","termid":"GO:0030205"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"dermatan sulfate catabolic process","synonyms":[{"name":"chondroitin sulfate B catabolic process","type":"exact"},{"name":"chondroitin sulfate B catabolism","type":"exact"},{"name":"dermatan sulfate breakdown","type":"exact"},{"name":"dermatan sulfate catabolism","type":"exact"},{"name":"dermatan sulfate degradation","type":"exact"},{"name":"dermatan sulphate catabolic process","type":"exact"},{"name":"dermatan sulphate catabolism","type":"exact"}],"termid":"GO:0030209"}


id: PBO:0060843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofilament medium chain","termid":"PBO:0060843"}


id: MONDO:0850048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eosinophilic pustular folliculitis","termid":"MONDO:0023076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"classic eosinophilic pustular folliculitis","secondary_identifiers":["Orphanet:617408","GARD:22452"],"termid":"MONDO:0850048","xrefs":{"Monarch":{"xref_id":"0850048"}}}


id: PBO:0070453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 10","termid":"PBO:0070453"}


id: MONDO:0017370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autoinflammatory syndrome with skin involvement (obsolete MONDO:0017370)","secondary_identifiers":["Orphanet:290842"],"termid":"MONDO:0017370","xrefs":{"Monarch":{"xref_id":"0017370"}}}


id: PBO:0065181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein S","termid":"PBO:0065181"}


id: MONDO:0010769
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hairy ears, Y-linked","secondary_identifiers":["UMLS:C1839070","OMIM:425500","MESH:C564029","MEDGEN:374123"],"synonyms":[{"name":"hairy ears, Y-linked","type":"exact"},{"name":"hairy ears, Y-linked, Y-linked","type":"exact"},{"name":"hypertrichosis pinnae auris, Y-linked","type":"related"}],"termid":"MONDO:0010769","xrefs":{"Monarch":{"xref_id":"0010769"}}}


id: SO:0000400
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describes a quality of sequence.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_attribute","synonyms":[{"name":"sequence attribute","type":"exact"}],"termid":"SO:0000400"}


id: PBO:0047831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box P2","termid":"PBO:0047831"}


id: FYPO:0000253
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of hydroxymethylglutaryl-CoA reductase (NADPH) activity is increased.","definition_xrefs":["PMID:19041767","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"increased HMG-CoA reductase activity","termid":"FYPO:0000253"}


id: FYPO:0007439
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of eisosome is abnormal. For example, an eisosome may protrude into the cell interior. The eisosome consists of a furrow-like plasma membrane sub-domain and associated integral transmembrane proteins, and the proteins (eisosome filaments) that form a scaffolding lattice on the cytoplasmic face.","definition_xrefs":["PomBase:mah","GO:0032126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal eisosome","termid":"FYPO:0007262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal eisosome morphology","synonyms":[{"name":"abnormal eisosome morphology during mitotic cell cycle","type":"related"},{"name":"abnormal eisosome morphology during vegetative growth","type":"exact"},{"name":"eisosome remodeling","type":"related"}],"termid":"FYPO:0007439"}


id: GO:0060597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the formation of the mammary line, placode or bud.","definition_xrefs":["GOC:dph","PMID:16168142"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in mammary gland formation (obsolete GO:0060597)","termid":"GO:0060597"}


id: GO:0031223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The behavior of an organism in response to a sound.","definition_xrefs":["GOC:pr","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mechanosensory behavior","termid":"GO:0007638"},{"relation_name":"part_of","term_name":"response to auditory stimulus","termid":"GO:0010996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"auditory behavior","synonyms":[{"name":"auditory behaviour","type":"exact"},{"name":"behavioral response to sound","type":"exact"},{"name":"behavioural response to sound","type":"exact"}],"termid":"GO:0031223"}


id: PBO:0044768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 50 pseudogene 2","termid":"PBO:0044768"}


id: PBO:0089281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall 1,3-beta-glucanosyltransferase Gas2","termid":"PBO:0089281"}


id: FYPO:0007734
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin at the 3' ends of genes that can be transcribed by RNA polymerase III is increased.","definition_xrefs":["PomBase:mah","PMID:33771877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin at 3' end of genes","termid":"FYPO:0007733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to chromatin at 3' end of RNA polymerase III-transcribed genes","synonyms":[{"name":"increased condensin localization to chromatin at 3' end of RNA polymerase III-transcribed genes","type":"narrow"},{"name":"increased protein localisation to chromatin at 3' end of RNA polymerase III-transcribed genes","type":"exact"},{"name":"increased protein localization to chromatin at 3' end of RNA polymerase III-transcribed genes during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at 3' end of RNA polymerase III-transcribed genes during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin downstream of RNA polymerase III-transcribed genes","type":"exact"}],"termid":"FYPO:0007734"}


id: PBO:0076676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A1 pseudogene 1","termid":"PBO:0076676"}


id: GO:0009419
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The pointed extremity furthest from the cell of a pilus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"pilus","termid":"GO:0009289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pilus tip","synonyms":[{"name":"fimbrial tip","type":"exact"}],"termid":"GO:0009419"}


id: GO:0008148
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity that decreases the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule following transcription initiation.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative transcription elongation factor activity (obsolete GO:0008148)","synonyms":[{"name":"negative transcription elongation factor activity","type":"exact"}],"termid":"GO:0008148"}


id: MOD:00572
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:15174056","PubMed:15828771","Unimod:343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized arginine biotinylated with biotin hydrazide","synonyms":[{"name":"Argbiotinhydrazide","type":"related"},{"name":"oxidized Arginine biotinylated with biotin hydrazide","type":"related"}],"termid":"MOD:00572"}


id: PBO:0046481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC excision repair 6, chromatin remodeling factor","termid":"PBO:0046481"}


id: PATO:0002109
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's resembling cheese.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caseous","synonyms":[{"name":"cheese-like","type":"exact"}],"termid":"PATO:0002109"}


id: PBO:0089340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD synthetase Nad1","termid":"PBO:0089340"}


id: PBO:0071135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 137","termid":"PBO:0071135"}


id: PBO:0113445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit beta1 of the nascent polypeptide-associated complex (NAC); involved in protein targeting to mitochondria; peripheral component of cytoplasmic ribosomes; regulates Atg32p phosphorylation to promote respiration-induced mitophagy; enhances DNA binding of the Gal4p; homolog of human BTF3b; EGD1 has a paralog, BTT1, that arose from the whole genome duplication","termid":"PBO:0113445"}


id: GO:0098585
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a host synaptic vesicle.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasmic vesicle membrane","termid":"GO:0044162"},{"relation_name":"part_of","term_name":"host cell synaptic vesicle","termid":"GO:0098584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell synaptic vesicle membrane","termid":"GO:0098585"}


id: PATO:0001151
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001151 relative susceptibility value (obsolete PATO:0001151)","termid":"PATO:0001151"}


id: PBO:0027991
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_mitotic_G2_phase","termid":"PBO:0027991"}


id: PBO:0073249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 2 pseudogene 1","termid":"PBO:0073249"}


id: GO:0018096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The synthesis of (S,Z)-S-(2-aminovinyl)cysteine forming an intra-polypeptide cross-link between serine and cysteine.","definition_xrefs":["RESID:AA0204"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via S-(2-aminovinyl)-D-cysteine (obsolete GO:0018096)","termid":"GO:0018096"}


id: GO:1905391
data:
  {"annotated_genes":["SJAG_02645"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107444],"is_not":false,"summary":null,"term":"GO:1905391"}]},"cv_name":"biological_process","definition":"Any regulation of protein localization to cell division site that is involved in cell separation after cytokinesis.","definition_xrefs":["GOC:TermGenie","PMID:25411334","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell division site","termid":"GO:1901900"},{"relation_name":"part_of","term_name":"septum digestion after cytokinesis","termid":"GO:0000920"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02645":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to cell division site involved in cell separation after cytokinesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of protein localisation to cell division site involved in cell separation after cytokinesis","type":"exact"},{"name":"regulation of protein localisation to cell division site involved in cell separation following cytokinesis","type":"exact"},{"name":"regulation of protein localisation to cell division site involved in cytokinetic cell separation","type":"related"},{"name":"regulation of protein localisation to cell division site involved in mitotic cytokinetic cell separation","type":"exact"}],"termid":"GO:1905391","terms_by_termid":{"GO:1905391":null}}


id: PBO:0042590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 3","termid":"PBO:0042590"}


id: PR:000050512
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiotic recombination protein rec8 (Schizosaccharomyces pombe) that lacks phosphorylation at the position equivalent to Ser-412 and that has been phosphorylated at the position equivalent to Ser-450 of the amino acid sequence represented by UniProtKB:P36626. Example: UniProtKB:P36626, Ser-412, PR:000026291|Ser-450, MOD:00046.","definition_xrefs":["PRO:DAN","PMID:33888556","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic recombination protein rec8 (Schizosaccharomyces pombe)","termid":"PR:000050510"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rec8/Phos:(S450),UnPhos(S412)","pombase_gene_id":"SPBC29A10.14","synonyms":[{"name":"PomBase_original_PRO_term_name: meiotic recombination protein rec8 phosphorylated 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rec8/Phos:2","type":"exact"},{"name":"UniProtKB:P36626, Ser-412, PR:000026291|Ser-450, MOD:00046","type":"narrow"},{"name":"rec8/Phos:(S450),UnPhos(S412)","type":"exact"}],"termid":"PR:000050512"}


id: PBO:0055467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2900","termid":"PBO:0055467"}


id: PATO:0000703
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000703 absolute threshold value (obsolete PATO:0000703)","termid":"PATO:0000703"}


id: GO:0098669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a preexisting viral infection prevents a secondary infection with the same or a closely related virus. Typically some aspect of viral entry is inhibited, but post entry mechanisms have also been documented.","definition_xrefs":["PMID:11985726","PMID:23692331","PMID:8012757","PMID:24089557","VZ:3971"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superinfection exclusion","termid":"GO:0098669"}


id: PBO:0089628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADHX epimerase","termid":"PBO:0089628"}


id: GO:1904309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cordycepin stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:21597460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to purine-containing compound","termid":"GO:0014074"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cordycepin","synonyms":[{"name":"response to 3'-deoxyadenosine","type":"exact"}],"termid":"GO:1904309"}


id: PBO:0029232
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_during_cellular_response_to_non-ionic_osmotic_stress","termid":"PBO:0029232"}


id: FYPO:0000463
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which flocculation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete normal flocculation (obsolete FYPO:0000463)","synonyms":[{"name":"flocculation: normal","type":"related"}],"termid":"FYPO:0000463"}


id: PATO:0000500
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A phase which occurs earlier than the natural start time.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phase","termid":"PATO:0000083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"advanced phase","termid":"PATO:0000500"}


id: PBO:0081424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 280B","termid":"PBO:0081424"}


id: MONDO:0009046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fraser syndrome is a rare clinical entity including as main characteristics cryptophthalmos and syndactyly.","definition_xrefs":["Orphanet:2052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"cryptophthalmia","termid":"MONDO:0020153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005328"],"is_obsolete":false,"name":"Fraser syndrome","secondary_identifiers":["OMIMPS:219000","DOID:0090001","icd11.foundation:968262849","MESH:D058497","NCIT:C118436","GARD:6465","NORD:1160","MEDGEN:82692","SCTID:204102004","UMLS:C0265233"],"synonyms":[{"name":"Fraser syndrome","type":"exact"},{"name":"Fraser-Francois syndrome","type":"related"},{"name":"Meyer-Schwickerath's syndrome","type":"related"},{"name":"Ulrich-Feichtiger syndrome","type":"related"},{"name":"cryptophthalmos syndrome","type":"related"},{"name":"cryptophthalmos with Other malformations","type":"related"},{"name":"cryptophthalmos with other malformations","type":"exact"},{"name":"cryptophthalmos-syndactyly syndrome","type":"exact"},{"name":"cyclopism","type":"related"}],"termid":"MONDO:0009046","xrefs":{"Monarch":{"xref_id":"0009046"}}}


id: PBO:0082394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of cytoplasmic phenylalanyl-tRNA synthetase; forms a tetramer with Frs2p to generate active enzyme; able to hydrolyze mis-aminoacylated tRNA-Phe, which could contribute to translational quality control","termid":"PBO:0082394"}


id: GO:0052842
data:
  {"annotated_genes":["SJAG_04870","SJAG_01154","SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114556,88199,104693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052843"},{"annotations":[88200,104694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052845"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: diphospho-1D-myo-inositol pentakisphosphate + H2O = 1D-myo-inositol hexakisphosphate + phosphate.","definition_xrefs":["PMID:10827188","PMID:11502751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoinositol-polyphosphate diphosphatase activity","termid":"GO:0008486"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_01154":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"inositol diphosphate pentakisphosphate diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2023971","Reactome:R-HSA-1855198"],"termid":"GO:0052842","terms_by_termid":{"GO:0052843":null,"GO:0052845":null}}


id: GO:1902036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hematopoietic stem cell differentiation.","definition_xrefs":["GOC:TermGenie","PMID:23403623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hematopoietic progenitor cell differentiation","termid":"GO:1901532"},{"relation_name":"is_a","term_name":"regulation of stem cell differentiation","termid":"GO:2000736"},{"relation_name":"regulates","term_name":"hematopoietic stem cell differentiation","termid":"GO:0060218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hematopoietic stem cell differentiation","secondary_identifiers":["Reactome:R-HSA-8939236"],"synonyms":[{"name":"regulation of haematopoietic stem cell differentiation","type":"exact"},{"name":"regulation of haemopoietic stem cell differentiation","type":"exact"},{"name":"regulation of hemopoietic stem cell differentiation","type":"exact"}],"termid":"GO:1902036"}


id: MONDO:0012758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial prostate cancer in which the cause of the disease is a mutation in the MSMB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostate cancer, hereditary","termid":"MONDO:0700275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate cancer, hereditary, 13","secondary_identifiers":["MEDGEN:383198","MESH:C567456","UMLS:C2677821","OMIM:611928","GARD:15534"],"synonyms":[{"name":"HPC13","type":"related"},{"name":"MSMB familial prostate cancer","type":"exact"},{"name":"familial prostate cancer caused by mutation in MSMB","type":"exact"},{"name":"prostate cancer, hereditary, 13","type":"exact"},{"name":"prostate cancer, hereditary, type 13","type":"exact"}],"termid":"MONDO:0012758","xrefs":{"Monarch":{"xref_id":"0012758"}}}


id: MONDO:0010995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Charcot-Marie-Tooth disease type 1 in which the cause of the disease is a mutation in the LITAF gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 1","termid":"MONDO:0019011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 1C","secondary_identifiers":["MESH:C537984","DOID:0110151","MEDGEN:75728","OMIM:601098","GARD:1247","icd11.foundation:1224517226","Orphanet:101083","UMLS:C0270913"],"synonyms":[{"name":"CMT 1C","type":"related"},{"name":"CMT slow nerve conduction type C","type":"exact"},{"name":"CMT, slow nerve conduction type C","type":"related"},{"name":"CMT1C","type":"exact"},{"name":"Charcot Marie Tooth disease type 1C","type":"related"},{"name":"Charcot-Marie-Tooth disease type 1 caused by mutation in LITAF","type":"exact"},{"name":"Charcot-Marie-Tooth disease, demyelinating, type 1C","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 1C","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy type 1C","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 1C","type":"related"},{"name":"HMSN 1C","type":"related"},{"name":"HMSN IC","type":"exact"},{"name":"HMSN1C","type":"exact"},{"name":"LITAF Charcot-Marie-Tooth disease type 1","type":"exact"},{"name":"neuropathy hereditary motor and sensory type 1C","type":"exact"},{"name":"neuropathy, hereditary motor and sensory, type 1C","type":"related"}],"termid":"MONDO:0010995","xrefs":{"Monarch":{"xref_id":"0010995"}}}


id: GO:0030058
data:
  {"annotated_genes":["SJAG_02496"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043799"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an aliphatic amine + an acceptor (A) + H2O = an aldehyde + a reduced acceptor (AH2) + NH4+.","definition_xrefs":["RHEA:51128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02496":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"aliphatic amine dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MADH activity","type":"related"},{"name":"amine dehydrogenase activity","type":"broad"},{"name":"amine: (acceptor) oxidoreductase (deaminating)","type":"related"},{"name":"methylamine dehydrogenase activity","type":"related"},{"name":"primary-amine dehydrogenase activity","type":"broad"},{"name":"primary-amine:acceptor oxidoreductase (deaminating)","type":"related"}],"termid":"GO:0030058","terms_by_termid":{"GO:0043799":null}}


id: FYPO:0003726
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any myo-inositol pentakisphosphate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular inositol pentakisphosphate level","synonyms":[{"name":"increased cellular inositol pentakisphosphate level during mitotic cell cycle","type":"related"},{"name":"increased cellular inositol pentakisphosphate level during vegetative growth","type":"exact"},{"name":"increased cellular myo-inositol pentakisphosphate level","type":"exact"},{"name":"increased inositol pentakisphosphate accumulation","type":"related"}],"termid":"FYPO:0003726"}


id: MONDO:0013251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Birbeck granule deficiency","secondary_identifiers":["OMIM:613393","MEDGEN:462007","UMLS:C3150657"],"synonyms":[{"name":"Birbeck granule deficiency","type":"exact"},{"name":"Birbeck granules, absence of","type":"related"}],"termid":"MONDO:0013251","xrefs":{"Monarch":{"xref_id":"0013251"}}}


id: MONDO:0030911
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 46","secondary_identifiers":["OMIM:617601","MEDGEN:1618560","UMLS:C4539851","DOID:0080237"],"synonyms":[{"name":"MRD46","type":"related"},{"name":"autosomal dominant intellectual disability 46","type":"related"},{"name":"autosomal dominant mental retardation 46","type":"related"},{"name":"intellectual disability, autosomal dominant 46","type":"exact"},{"name":"mental retardation, autosomal dominant 46","type":"related"}],"termid":"MONDO:0030911","xrefs":{"Monarch":{"xref_id":"0030911"}}}


id: PBO:0073849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC9A3 antisense RNA 1","termid":"PBO:0073849"}


id: MONDO:0015175
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune pancreatitis (AIP) is a rare pancreatic disease characterized by chronic non-alcoholic pancreatitis that presents with abdominal pain, steatorrhea, obstructive jaundice and responds well to steroid therapy and is seen in two subforms: type 1 AIP which affects elderly males, involves other organs and has increased immunoglobin G4 (IgG4) levels and type 2 AIP which affects both sexes equally but presents at a younger age and has no other organ involvement or increased IgG4 levels.","definition_xrefs":["Orphanet:103919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of endocrine system","termid":"MONDO:0000569"},{"relation_name":"is_a","term_name":"autoimmune disorder of gastrointestinal tract","termid":"MONDO:0000588"},{"relation_name":"is_a","term_name":"pancreatitis","termid":"MONDO:0004982"},{"relation_name":"is_a","term_name":"IgG4-related disease","termid":"MONDO:0017287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"autoimmune pancreatitis","secondary_identifiers":["MEDGEN:750633","UMLS:C2609129","NANDO:2200943","SCTID:448542008","GARD:10911","icd11.foundation:2057951941","MESH:D000081012","MedDRA:10069002","NANDO:1200925","DOID:0040091"],"synonyms":[{"name":"AIP","type":"exact"},{"name":"lymphoplasmocytic sclerosing pancreatitis","type":"related"}],"termid":"MONDO:0015175","xrefs":{"Monarch":{"xref_id":"0015175"}}}


id: PBO:0058516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5704","termid":"PBO:0058516"}


id: SO:0001799
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The heterochromatic outer repeat region of a modular centromere. These repeats exist in tandem arrays on both chromosome arms.","definition_xrefs":["SO:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"centromeric_repeat","termid":"SO:0001797"},{"relation_name":"part_of","term_name":"regional_centromere","termid":"SO:0001795"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regional_centromere_outer_repeat_region","synonyms":[{"name":"regional centromere outer repeat region","type":"exact"}],"termid":"SO:0001799"}


id: MONDO:0019246
data:
  {"annotated_genes":["SJAG_05182","SJAG_04706","SJAG_02139","SJAG_04295","SJAG_05175"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84868,84864,84866,84867,84865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010027"},{"annotations":[84850,84849,84852,84853,84851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011449"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease","termid":"MONDO:0002561"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02139":null,"SJAG_04295":null,"SJAG_04706":null,"SJAG_05175":null,"SJAG_05182":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of lysosomal amino acid transport","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18974","MEDGEN:1842266","Orphanet:79207","UMLS:C5681276"],"synonyms":[{"name":"disorder of lysosomal amino acid transport","type":"related"}],"termid":"MONDO:0019246","terms_by_termid":{"MONDO:0010027":null,"MONDO:0011449":null},"xrefs":{"Monarch":{"xref_id":"0019246"}}}


id: MONDO:1010713
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pyruvate dehydrogenase deficiency that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate dehydrogenase deficiency, non-human animal","termid":"MONDO:1010105"},{"relation_name":"is_a","term_name":"peripheral neuropathy, dog","termid":"MONDO:1011007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase deficiency, dog","secondary_identifiers":["OMIA:001406-9615"],"termid":"MONDO:1010713","xrefs":{"Monarch":{"xref_id":"1010713"}}}


id: GO:0035042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Replacement of sperm-specific chromosomal proteins with somatic histones, to allow the paternal genome to acquire a nucleosomal chromatin organization compatible with nuclear activity.","definition_xrefs":["PMID:11735001","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete fertilization, exchange of chromosomal proteins (obsolete GO:0035042)","synonyms":[{"name":"sperm-specific histone exchange","type":"exact"},{"name":"sperm-specific histone replacement","type":"exact"}],"termid":"GO:0035042"}


id: MONDO:0024877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a clitoris.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar neoplasm","termid":"MONDO:0021049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clitoris neoplasm","secondary_identifiers":["UMLS:C1263793","SCTID:126925009","MEDGEN:688068","ICD9:239.5"],"synonyms":[{"name":"clitoral neoplasm","type":"exact"},{"name":"clitoris tumor","type":"exact"},{"name":"clitoris tumour","type":"exact"},{"name":"neoplasm of clitoris","type":"exact"},{"name":"tumor of clitoris","type":"exact"},{"name":"tumour of clitoris","type":"exact"}],"termid":"MONDO:0024877","xrefs":{"Monarch":{"xref_id":"0024877"}}}


id: PBO:0059704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 12","termid":"PBO:0059704"}


id: MONDO:1011109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cryptorchidism that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cryptorchidism, non-human animal","termid":"MONDO:1010275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptorchidism, domestic cat","secondary_identifiers":["OMIA:000243-9685"],"termid":"MONDO:1011109","xrefs":{"Monarch":{"xref_id":"1011109"}}}


id: PBO:0063917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIK3CD antisense RNA 2","termid":"PBO:0063917"}


id: MONDO:0020089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of lipodystrophy (disease) that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired metabolic disease","termid":"MONDO:0006504"},{"relation_name":"is_a","term_name":"lipodystrophy","termid":"MONDO:0006573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"acquired lipodystrophy","secondary_identifiers":["MedDRA:10049287","GARD:12602","MEDGEN:798705","Orphanet:98307","UMLS:C0877192"],"synonyms":[{"name":"acquired lipodystrophy (disease)","type":"exact"}],"termid":"MONDO:0020089","xrefs":{"Monarch":{"xref_id":"0020089"}}}


id: PBO:0003281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NADH dehydrogenase (predicted)","termid":"PBO:0003281"}


id: PBO:0005540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'(2'),5'-bisphosphate nucleotidase/inositol-1,4- bisphosphate 1-phosphatase","termid":"PBO:0005540"}


id: PBO:0109298
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mad1 homodimers assemble co-translationally","termid":"PBO:0109298"}


id: SO:0000197
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence of the three_prime_coding_exon that codes for protein.","definition_xrefs":["SO:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coding_region_of_exon","termid":"SO:0001215"},{"relation_name":"part_of","term_name":"three_prime_coding_exon","termid":"SO:0000202"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_coding_exon_coding_region","synonyms":[{"name":"three prime exon coding region","type":"exact"}],"termid":"SO:0000197"}


id: FYPO:0005218
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of histone H2A measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased level of histone H2A in cell","synonyms":[{"name":"decreased accumulation of histone H2A in cell","type":"related"},{"name":"decreased cellular histone H2A level","type":"exact"},{"name":"decreased histone H2A level during vegetative growth","type":"exact"},{"name":"decreased level of histone H2A in cell during mitotic cell cycle","type":"related"},{"name":"decreased level of histone H2A in cell during vegetative growth","type":"exact"},{"name":"reduced level of histone H2A in cell","type":"exact"}],"termid":"FYPO:0005218"}


id: PBO:0047770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box A2","termid":"PBO:0047770"}


id: GO:0097360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of chorionic trophoblast cells, resulting in the expansion of their population.","definition_xrefs":["CL:0011101","GOC:BHF","PMID:15150278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chorionic trophoblast cell proliferation","termid":"GO:0097360"}


id: FYPO:0007936
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the number of sites of  DNA breakpoint junctions is greater than normal.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased DNA damage","termid":"FYPO:0003546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased number of DNA breakpoint junctions","termid":"FYPO:0007936"}


id: PBO:0001139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint clamp complex protein Rad9","termid":"PBO:0001139"}


id: MONDO:0005921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malaria resulting from infection by Plasmodium vivax.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malaria","termid":"MONDO:0005136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Plasmodium vivax malaria","secondary_identifiers":["EFO:0007445","ICD10CM:B51","ICD9:084.1","DOID:12978","NCIT:C34800","UMLS:C0024537","SCTID:27052006","MESH:D016780","MEDGEN:6186"],"synonyms":[{"name":"malaria by Plasmodium vivax","type":"exact"},{"name":"vivax malaria","type":"exact"}],"termid":"MONDO:0005921","xrefs":{"Monarch":{"xref_id":"0005921"}}}


id: GO:0010998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translation initiation in response to stress by the phosphorylation of eIF2 alpha.","definition_xrefs":["GOC:hjd","GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylation","termid":"GO:0006468"},{"relation_name":"is_a","term_name":"regulation of translational initiation in response to stress","termid":"GO:0043558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of translational initiation by eIF2 alpha phosphorylation","synonyms":[{"name":"eIF2 alpha phosphorylation in response to stress","type":"exact"},{"name":"regulation of translational initiation by eIF2 alpha phosphorylation in response to stress","type":"exact"}],"termid":"GO:0010998"}


id: GO:0047027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzyl (2R,3S)-2-methyl-3-hydroxybutanoate + NADP+ = benzyl 2-methyl-3-oxobutanoate + H+ + NADPH.","definition_xrefs":["EC:1.1.1.217","RHEA:16405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"benzyl-2-methyl-hydroxybutyrate dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.217-RXN","KEGG_REACTION:R04370"],"synonyms":[{"name":"benzyl 2-methyl-3-hydroxybutyrate dehydrogenase activity","type":"related"},{"name":"benzyl-(2R,3S)-2-methyl-3-hydroxybutanoate:NADP+ 3-oxidoreductase activity","type":"related"}],"termid":"GO:0047027"}


id: MONDO:0021424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangiopericytoma that involves the zone of skin.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin neoplasm","termid":"MONDO:0002531"},{"relation_name":"is_a","term_name":"hemangiopericytoma","termid":"MONDO:0005094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hemangiopericytoma of skin","secondary_identifiers":["SCTID:254796009","NCIT:C4492","UMLS:C0346084","MEDGEN:91081"],"synonyms":[{"name":"hemangiopericytoma of the skin","type":"exact"},{"name":"skin hemangiopericytoma","type":"exact"},{"name":"zone of skin hemangiopericytoma","type":"exact"}],"termid":"MONDO:0021424","xrefs":{"Monarch":{"xref_id":"0021424"}}}


id: PBO:0047781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXD2 adjacent opposite strand RNA 1","termid":"PBO:0047781"}


id: GO:0051358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of the non-fluorescent protein chromophore cross-link from the alpha-carboxyl carbon of residue n, a glutamic acid, to the alpha-amino nitrogen of residue n+2, a glycine, and a dehydration to form a double bond to the alpha-amino nitrogen of residue n+1. This cross-linking is coupled with a dehydrogenation of residue n+1 to form a double bond between the alpha and beta carbons. This modification is found in the GFP-like non-fluorescent red chromoprotein from the sea anemone Radianthus macrodactylus.","definition_xrefs":["RESID:AA0378","PMID:11682051"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 2-imino-glutamic acid 5-imidazolinone glycine (obsolete GO:0051358)","synonyms":[{"name":"biosynthesis of protein-protein cross-link via 2-imino-glutamic acid 5-imidazolinone glycine","type":"exact"},{"name":"biosynthetic process of protein-protein cross-link via 2-imino-glutamic acid 5-imidazolinone glycine","type":"exact"}],"termid":"GO:0051358"}


id: MONDO:0019804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital tracheomalacia is a rare condition where the trachea is soft and flexible causing the tracheal wall to collapse when exhaling, coughing or crying, that usually presents in infancy, and that is characterized by stridor and noisy breathing or upper respiratory infections. Tracheomalacia improves by the age of 18-24 months.","definition_xrefs":["Orphanet:95430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tracheal disorder","termid":"MONDO:0002567"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tracheomalacia","secondary_identifiers":["MESH:D055090","icd11.foundation:303133490","GARD:10515","NCIT:C98634","MEDGEN:215296","HP:0002779","icd11.foundation:1616705280","SCTID:95467005","UMLS:C0948187","MedDRA:10010654","ICD9:748.3","DOID:0060313","NANDO:2200195","NORD:2028"],"synonyms":[{"name":"Congenital Tracheomalacia","type":"exact"},{"name":"congenital major airway collapse","type":"exact"},{"name":"congenital tracheomalacia","type":"exact"},{"name":"tracheomalacia, congenital","type":"related"},{"name":"type 1 tracheomalacia","type":"related"}],"termid":"MONDO:0019804","xrefs":{"Monarch":{"xref_id":"0019804"}}}


id: PBO:0000994
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fanconi anemia","termid":"PBO:0000994"}


id: PBO:0040961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 32","termid":"PBO:0040961"}


id: GO:0004938
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with epinephrine or norepinephrine to initiate a change in cell activity via activation of a G protein, with pharmacological characteristics of alpha2-adrenergic receptors; the activity involves transmitting the signal to the Gi alpha subunit of a heterotrimeric G protein.","definition_xrefs":["IUPHAR_GPCR:1274","GOC:cb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-adrenergic receptor activity","termid":"GO:0004936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"alpha2-adrenergic receptor activity","secondary_identifiers":["Reactome:R-HSA-400071"],"synonyms":[{"name":"alpha2 adrenoceptor","type":"exact"}],"termid":"GO:0004938"}


id: GO:0048453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the sepal. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ formation","termid":"GO:0048449"},{"relation_name":"part_of","term_name":"sepal morphogenesis","termid":"GO:0048447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sepal formation","secondary_identifiers":["GO:0048423"],"termid":"GO:0048453"}


id: PR:000050483
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the rng2 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras GTPase-activating-like protein rng2 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC4F8.13c","synonyms":[{"name":"Ring assembly protein 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"SPAC4F8.13c","type":"related"},{"name":"Spom-rng2","type":"exact"},{"name":"rng2","type":"related"}],"termid":"PR:000050483"}


id: PBO:0041413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 7 open reading frame 31","termid":"PBO:0041413"}


id: GO:0072303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of metanephric glomerular mesangial cell proliferation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glomerular mesangial cell proliferation","termid":"GO:0072126"},{"relation_name":"is_a","term_name":"regulation of metanephric glomerular mesangial cell proliferation","termid":"GO:0072301"},{"relation_name":"positively_regulates","term_name":"metanephric glomerular mesangial cell proliferation involved in metanephros development","termid":"GO:0072262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glomerular metanephric mesangial cell proliferation","termid":"GO:0072303"}


id: GO:1902154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to DNA damage checkpoint signaling.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to DNA integrity checkpoint signaling","termid":"GO:1902152"},{"relation_name":"is_a","term_name":"regulation of response to DNA damage checkpoint signaling","termid":"GO:1902153"},{"relation_name":"positively_regulates","term_name":"response to DNA damage checkpoint signaling","termid":"GO:0072423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to DNA damage checkpoint signaling","synonyms":[{"name":"activation of DNA damage checkpoint effector process","type":"exact"},{"name":"activation of response to DNA damage checkpoint signaling","type":"narrow"},{"name":"activation of response to signal involved in DNA damage checkpoint","type":"exact"},{"name":"positive regulation of DNA damage checkpoint effector process","type":"exact"},{"name":"positive regulation of response to signal involved in DNA damage checkpoint","type":"exact"},{"name":"up regulation of DNA damage checkpoint effector process","type":"exact"},{"name":"up regulation of response to DNA damage checkpoint signaling","type":"exact"},{"name":"up regulation of response to signal involved in DNA damage checkpoint","type":"exact"},{"name":"up-regulation of DNA damage checkpoint effector process","type":"exact"},{"name":"up-regulation of response to DNA damage checkpoint signaling","type":"exact"},{"name":"up-regulation of response to signal involved in DNA damage checkpoint","type":"exact"},{"name":"upregulation of DNA damage checkpoint effector process","type":"exact"},{"name":"upregulation of response to DNA damage checkpoint signaling","type":"exact"},{"name":"upregulation of response to signal involved in DNA damage checkpoint","type":"exact"}],"termid":"GO:1902154"}


id: PBO:0066480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"refilin A","termid":"PBO:0066480"}


id: PBO:0044660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DCUN1D2 antisense RNA","termid":"PBO:0044660"}


id: GO:1904755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gut granule assembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:17535251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"gut granule assembly","termid":"GO:1902900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of gut granule assembly","synonyms":[{"name":"regulation of gut granule biogenesis","type":"exact"},{"name":"regulation of gut granule formation","type":"exact"}],"termid":"GO:1904755"}


id: MONDO:0015427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paroxysmal dyskinesia (PD) is a rare heterogenous group of movement disorders manifesting as abnormal involuntary movements that recur episodically and last only a brief time. PD includes paroxysmal kinesigenic dyskinesia (PKD), paroxysmal non-kinesigenic dyskinesia (PNKD), paroxysmal exertion-induced dyskinesia (PED) and a variant form of PKD, infantile convulsion and choreoathetosis (ICCA syndrome).","definition_xrefs":["Orphanet:1431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paroxysmal dystonia","termid":"MONDO:0016058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"paroxysmal dyskinesia","secondary_identifiers":["ICD9:333.5","MESH:D002819","UMLS:C0752210","MEDGEN:156242","GARD:18721","SCTID:49949003"],"synonyms":[{"name":"paroxysmal choreoathetosis","type":"exact"},{"name":"paroxysmal dystonic choreoathetosis","type":"exact"}],"termid":"MONDO:0015427","xrefs":{"Monarch":{"xref_id":"0015427"}}}


id: GO:0050739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cross-linking of a tyrosine residue to a tryptophan residue and a methionine residue to form S-[5'-(L-tryptoph-6'-yl)-L-tyrosin-3'-yl]-L-methionin-S-ium.","definition_xrefs":["RESID:AA0348"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via S-[5'-(L-tryptoph-6'-yl)-L-tyrosin-3'-yl]-L-methionin-S-ium (obsolete GO:0050739)","termid":"GO:0050739"}


id: PBO:0068952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 196, pseudogene","termid":"PBO:0068952"}


id: PBO:0003712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin binding vezatin family protein involved in peroxisome inheritance Inp2 (predicted)","termid":"PBO:0003712"}


id: MONDO:0013967
data:
  {"annotated_genes":["SJAG_04146","SJAG_02788"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86683,86684],"is_not":false,"summary":null,"term":"MONDO:0013967"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"peroxisome biogenesis disorder","termid":"MONDO:0019234"},{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX11B defect","termid":"MONDO:0100279"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02788":null,"SJAG_04146":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005066","MONDO:0005559","MONDO:0019053","MONDO:0006025"],"is_obsolete":false,"name":"peroxisome biogenesis disorder 14B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:766969","OMIM:614920","DOID:0081274","GARD:15881","UMLS:C3554055"],"synonyms":[{"name":"PEX11B peroxisome biogenesis disorder","type":"exact"},{"name":"PEX14B","type":"related"},{"name":"peroxisome biogenesis disorder 14B","type":"exact"},{"name":"peroxisome biogenesis disorder type 14B","type":"exact"}],"termid":"MONDO:0013967","terms_by_termid":{"MONDO:0013967":null},"xrefs":{"Monarch":{"xref_id":"0013967"}}}


id: MONDO:0013451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete progressive myoclonic epilepsy type 5 (obsolete MONDO:0013451)","termid":"MONDO:0013451","xrefs":{"Monarch":{"xref_id":"0013451"}}}


id: PBO:0075950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal antigen 3-like 5 pseudogene","termid":"PBO:0075950"}


id: PBO:0045714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 2","termid":"PBO:0045714"}


id: PBO:0048886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 5, pseudogene","termid":"PBO:0048886"}


id: PBO:0067069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 97, pseudogene","termid":"PBO:0067069"}


id: PBO:0116284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mg2+-dependent phosphatidate (PA) phosphatase; dephosphorylates PA to yield diacylglycerol; regulates phospholipid synthesis, nuclear/ER membrane growth, lipid droplet formation, triacylglycerol synthesis, vacuolar homeostasis and cell wall integrity; phosphorylated by Hsl1p, Pho85p/Pho80p, Cdc28p/Cyclin B, PKA, PKC, and CKII, regulating activity, localization, and proteosomal degradation; homolog of mammalian lipins 1 and 2; human homologs LPIN1, LPIN2, LPIN3 complement the null","termid":"PBO:0116284"}


id: GO:0033926
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions : D-galactosyl-3-(N-acetyl-beta-D-galactosaminyl)-L-serine + H2O = D-galactosyl-3-N-acetyl-beta-D-galactosamine + L-serine and D-galactosyl-3-(N-acetyl-beta-D-galactosaminyl)-L-threonyl + H2O = D-galactosyl-3-N-acetyl-beta-D-galactosamine + L-threonyl.","definition_xrefs":["EC:3.2.1.97"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0140096","GO:0016787","GO:0016798","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"endo-alpha-N-acetylgalactosaminidase activity","secondary_identifiers":["KEGG_REACTION:R04527","MetaCyc:3.2.1.97-RXN"],"synonyms":[{"name":"D-galactosyl-3-(N-acetyl-alpha-D-galactosaminyl)-L-serine mucinaminohydrolase activity","type":"related"},{"name":"D-galactosyl-N-acetyl-alpha-D-galactosamine D-galactosyl-N-acetyl-galactosaminohydrolase activity","type":"related"},{"name":"endo-alpha-acetylgalactosaminidase activity","type":"related"},{"name":"mucinaminylserine mucinaminidase activity","type":"exact"}],"termid":"GO:0033926"}


id: GO:0009318
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes exonucleolytic cleavage in either 5' to 3' or 3' to 5' direction to yield nucleoside 5'-phosphates; it prefers single-stranded DNA.","definition_xrefs":["PMID:6284744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"exodeoxyribonuclease VII complex","termid":"GO:0009318"}


id: MONDO:0015524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperplastic polyposis syndrome is a rare, genetic intestinal disease characterized by the presence of multiple (usually large) hyperplastic/serrated colorectal polyps, usually with a pancolonic distribution. Histology reveals hyperplastic polyps, sessile serrated adenomas (most common), traditional serrated adenomas or mixed polyps. It is associated with an increased personal and familial (first-degree relatives) risk of colorectal cancer.","definition_xrefs":["Orphanet:157798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"},{"relation_name":"is_a","term_name":"intestinal polyposis syndrome","termid":"MONDO:0015185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"hyperplastic polyposis syndrome","secondary_identifiers":["GARD:16982","NCIT:C165469","SCTID:763536006","UMLS:C4296896","MEDGEN:1645454","icd11.foundation:1344352020"],"synonyms":[{"name":"serrated polyposis","type":"exact"}],"termid":"MONDO:0015524","xrefs":{"Monarch":{"xref_id":"0015524"}}}


id: MOD:01484
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-glutamic acid residue and an L-lysine residue by an isopeptide bond to form N6-(L-isoglutamyl)-L-lysine and the release of water.","definition_xrefs":["RESID:AA0124#GLU","ChEBI:21863","PubMed:19015515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"N6-(L-isoglutamyl)-L-lysine","termid":"MOD:01630"},{"relation_name":"is_a","term_name":"crosslinked L-glutamic acid residue","termid":"MOD:02045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"N6-(L-isoglutamyl)-L-lysine (Glu)","synonyms":[{"name":"(2S)-2-amino-6-([(4S)-4-amino-4-carboxybutanoyl]amino)hexanoic acid","type":"exact"},{"name":"2-azanyl-6-([4-azanyl-4-carboxybutanoyl]azanyl)hexanoic acid","type":"exact"},{"name":"5-glutamyl N6-lysine","type":"exact"},{"name":"N alpha -(gamma-Glutamyl)-lysine","type":"exact"},{"name":"N(epsilon)-(gamma-glutamyl)lysine","type":"exact"},{"name":"N6-(L-isoglutamyl)-L-lysine","type":"exact"}],"termid":"MOD:01484"}


id: PBO:0026947
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_transcription_during_meiotic_cell_cycle","termid":"PBO:0026947"}


id: MONDO:0002132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the skull.","direct_ancestors":[{"relation_name":"is_a","term_name":"bone cancer","termid":"MONDO:0002129"},{"relation_name":"is_a","term_name":"head and neck cancer","termid":"MONDO:0005627"},{"relation_name":"is_a","term_name":"skull neoplasm","termid":"MONDO:0024653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"skull cancer","secondary_identifiers":["DOID:1863","SCTID:126538005","MEDGEN:1662558","UMLS:C2062986","NCIT:C155790"],"synonyms":[{"name":"cancer of skull","type":"exact"},{"name":"malignant neoplasm of skull","type":"exact"},{"name":"malignant skull neoplasm","type":"exact"},{"name":"skull cancer","type":"exact"}],"termid":"MONDO:0002132","xrefs":{"Monarch":{"xref_id":"0002132"}}}


id: FYPO:0004047
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains two nuclei and pieces of a septum that does not completely bisect the cell.","definition_xrefs":["PMID:21931816","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binucleate vegetative cell","termid":"FYPO:0001222"},{"relation_name":"is_a","term_name":"fragmented septum","termid":"FYPO:0004042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0000032","FYPO:0001320"],"is_obsolete":false,"name":"binucleate vegetative cell with fragmented septum","synonyms":[{"name":"binucleate cells with fragmented septum during vegetative growth","type":"exact"},{"name":"binucleate vegetative cell with fragmented septum during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004047"}


id: PBO:0088845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit V","termid":"PBO:0088845"}


id: GO:0032524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of nutrients out of a cell or organelle.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete nutrient export (obsolete GO:0032524)","synonyms":[{"name":"nutrient export","type":"exact"}],"termid":"GO:0032524"}


id: PBO:0027783
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_threonine_phosphorylation","termid":"PBO:0027783"}


id: PBO:0070494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 29","termid":"PBO:0070494"}


id: FYPO:0003414
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell septum is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell division site","termid":"FYPO:0002442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to septum","synonyms":[{"name":"normal protein localisation to septum","type":"exact"},{"name":"normal protein localization to cell septum","type":"exact"},{"name":"normal protein localization to division septum","type":"exact"},{"name":"normal protein localization to septum during mitotic cell cycle","type":"related"},{"name":"normal protein localization to septum during vegetative growth","type":"exact"}],"termid":"FYPO:0003414"}


id: PBO:0038765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3 pseudogene 2","termid":"PBO:0038765"}


id: MOD:00270
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to an internal 1-thioglycine.","definition_xrefs":["RESID:AA0265#INT","PubMed:11463785","PubMed:9367957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1-thioglycine","termid":"MOD:01625"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-thioglycine (internal)","synonyms":[{"name":"1-thioglycine","type":"exact"},{"name":"2-amino-1-sulfanylethanone","type":"exact"},{"name":"Carboxy->Thiocarboxy","type":"related"},{"name":"MOD_RES 1-thioglycine","type":"exact"},{"name":"S(O)Gly","type":"exact"},{"name":"aminoethanethioic O-acid","type":"exact"},{"name":"aminoethanethioic acid","type":"exact"},{"name":"aminoethanethionic acid","type":"exact"},{"name":"aminothioacetic acid","type":"exact"},{"name":"thiocarboxylic acid","type":"related"}],"termid":"MOD:00270"}


id: PBO:0083628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin ligase targeting centromere-binding protein Cse4p; mediates polyubiquitination and degradation of histone H3 variant Cse4p; ubiquitination of Cse4p may be antagonized by Scm3p; interacts with the FACT complex preventing mislocalization of Cse4p to euchromatin independent of Slx5p; formyl-methionine/N-recognin component of N-end rule pathway mediating destruction of formylated cytosolic proteins elevated in response to starvation or stationary phase entry","termid":"PBO:0083628"}


id: FYPO:0007056
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of substances via vesicles from the Golgi to other parts of the cell is abnormal..","definition_xrefs":["PomBase:mah","GO:0006892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vesicle-mediated transport during vegetative growth","termid":"FYPO:0000213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abnormal post-Golgi vesicle-mediated transport","synonyms":[{"name":"abnormal exit from TGN","type":"exact"},{"name":"abnormal post-Golgi transport","type":"exact"},{"name":"abnormal post-Golgi vesicle-mediated transport during mitotic cell cycle","type":"related"},{"name":"abnormal post-Golgi vesicle-mediated transport during vegetative growth","type":"exact"}],"termid":"FYPO:0007056"}


id: MONDO:0009373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Seizures-intellectual disability due to hydroxylysinuria syndrome is characterized by hydroxylysinuria, myoclonic and motor seizures and intellectual deficit. It has been described in a brother and sister born to consanguineous parents and in one unrelated patient.","definition_xrefs":["Orphanet:79156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of lysine and hydroxylysine metabolism","termid":"MONDO:0017351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"seizures-intellectual disability due to hydroxylysinuria syndrome","secondary_identifiers":["MEDGEN:343450","UMLS:C1855986","MESH:C565502","OMIM:236900","GARD:16709"],"synonyms":[{"name":"hydroxylysinuria","type":"related"}],"termid":"MONDO:0009373","xrefs":{"Monarch":{"xref_id":"0009373"}}}


id: PBO:0059244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L14 pseudogene 1","termid":"PBO:0059244"}


id: PBO:0067861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 163","termid":"PBO:0067861"}


id: PBO:0088757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S47/3-hydroxyisobutyryl-CoA hydrolase Snr1","termid":"PBO:0088757"}


id: PBO:0045194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB6 pseudogene 7","termid":"PBO:0045194"}


id: FYPO:0002676
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of dTTP measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular dTTP level","termid":"FYPO:0002572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"dTTP absent from cell","synonyms":[{"name":"dTTP absent from cell during mitotic cell cycle","type":"related"},{"name":"dTTP absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0002676"}


id: MONDO:0024973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cattle disease of uncertain cause, probably an allergic reaction.","definition_xrefs":["MESH:D011016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bovine respiratory disease complex","termid":"MONDO:0005678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pneumonia, atypical interstitial, of cattle","synonyms":[{"name":"Adenomatoses, bovine pulmonary","type":"related"},{"name":"Fog fever","type":"related"},{"name":"adenomatosis, bovine pulmonary","type":"related"},{"name":"adenomatosis, pulmonary, bovine","type":"related"},{"name":"atypical interstitial pneumonia of cattle","type":"related"},{"name":"bovine pulmonary Adenomatoses","type":"related"},{"name":"bovine pulmonary adenomatosis","type":"related"},{"name":"emphysema, acute bovine pulmonary","type":"related"},{"name":"fever, Fog","type":"related"},{"name":"pulmonary Adenomatoses, bovine","type":"related"},{"name":"pulmonary adenomatosis, bovine","type":"related"}],"termid":"MONDO:0024973","xrefs":{"Monarch":{"xref_id":"0024973"}}}


id: MONDO:0019507
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Amelogenesis imperfecta (AI) represents a group of developmental conditions affecting the structure and clinical appearance of the enamel of all or nearly all the teeth in a more or less equal manner, and which may be associated with morphologic or biochemical changes elsewhere in the body.","definition_xrefs":["Orphanet:88661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dental enamel hypoplasia","termid":"MONDO:0004038"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta","secondary_identifiers":["DOID:2187","icd11.foundation:1923123066","CSP:0828-0533","ICD9:520.5","MESH:D000567","SCTID:78494001","NORD:765","OMIMPS:104500","UMLS:C0002452","GARD:5791","MEDGEN:240"],"termid":"MONDO:0019507","xrefs":{"Monarch":{"xref_id":"0019507"}}}


id: GO:0051280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the release into the cytosolic compartment of calcium ions sequestered in the endoplasmic reticulum or mitochondria.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of release of sequestered calcium ion into cytosol","termid":"GO:0051279"},{"relation_name":"is_a","term_name":"positive regulation of sequestering of calcium ion","termid":"GO:0051284"},{"relation_name":"is_a","term_name":"negative regulation of calcium ion transmembrane transport","termid":"GO:1903170"},{"relation_name":"negatively_regulates","term_name":"release of sequestered calcium ion into cytosol","termid":"GO:0051209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of release of sequestered calcium ion into cytosol","synonyms":[{"name":"down regulation of release of sequestered calcium ion into cytosol","type":"exact"},{"name":"down-regulation of release of sequestered calcium ion into cytosol","type":"exact"},{"name":"downregulation of release of sequestered calcium ion into cytosol","type":"exact"},{"name":"inhibition of release of sequestered calcium ion into cytosol","type":"narrow"},{"name":"negative regulation of calcium ion (Ca2+) mobilization","type":"broad"},{"name":"negative regulation of calcium mobilization","type":"broad"},{"name":"negative regulation of cytoplasmic release of sequestered calcium ion (Ca2+)","type":"broad"},{"name":"negative regulation of cytoplasmic release of stored calcium ion (Ca2+)","type":"broad"},{"name":"negative regulation of cytosolic release of sequestered calcium ion (Ca2+)","type":"exact"},{"name":"negative regulation of cytosolic release of stored calcium ion (Ca2+)","type":"exact"},{"name":"negative regulation of release of sequestered calcium ion (Ca2+)","type":"broad"},{"name":"negative regulation of release of sequestered calcium ion into cytoplasm","type":"broad"},{"name":"negative regulation of release of stored calcium ion (Ca2+)","type":"broad"},{"name":"negative regulation of release of stored calcium ion (Ca2+) into cytoplasm","type":"broad"},{"name":"negative regulation of release of stored calcium ion (Ca2+) into cytosol","type":"exact"}],"termid":"GO:0051280"}


id: PBO:0053517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 507","termid":"PBO:0053517"}


id: PBO:0065222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 4","termid":"PBO:0065222"}


id: PBO:0090213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOUT domain containing methyltransferase","termid":"PBO:0090213"}


id: GO:0097712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which vesicles formed at the trans-Golgi network are directed to the plasma membrane surrounding the base of the cilium, including the ciliary pocket, mediated by molecules at the vesicle membrane and target membrane surfaces.","definition_xrefs":["PMID:24814148","GOC:cilia","PMID:20106869","PMID:23351793","PMID:26485645"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle targeting, to, from or within Golgi","termid":"GO:0048199"},{"relation_name":"part_of","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0044085","GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"vesicle targeting, trans-Golgi to periciliary membrane compartment","termid":"GO:0097712"}


id: PBO:0045810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EEF1A1 antisense RNA 1","termid":"PBO:0045810"}


id: MONDO:0957467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urogenital tuberculosis","termid":"MONDO:0006002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary genito-urinary tuberculosis","secondary_identifiers":["Orphanet:645874"],"termid":"MONDO:0957467","xrefs":{"Monarch":{"xref_id":"0957467"}}}


id: PBO:0062701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily E member 2","termid":"PBO:0062701"}


id: PR:Q09838
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcriptional regulator prz1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PomBase:MAH","PMID:12637524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional regulator prz1","termid":"PR:000027513"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional regulator prz1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.13c","secondary_identifiers":["UniProtKB:Q09838","PR:000027514"],"synonyms":[{"name":"SPAC4G8.13C","type":"related"},{"name":"Spom972h-prz1","type":"exact"}],"termid":"PR:Q09838"}


id: PBO:0074882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 61","termid":"PBO:0074882"}


id: PBO:0087771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of U3-containing 90S preribosome and SSU processome complexes; involved in production of 18S rRNA and assembly of small ribosomal subunit; synthetic defect with STI1 Hsp90 cochaperone; human homolog linked to glaucoma; Small Subunit processome is also known as SSU processome","termid":"PBO:0087771"}


id: PR:O94686
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl4302 gene.","definition_xrefs":["UniProtKB:O94686","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L43-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.02c","synonyms":[{"name":"L37B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpl4302","type":"exact"}],"termid":"PR:O94686"}


id: GO:0052029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a host signal transduction pathway. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host signal transduction pathway","termid":"GO:0052027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host signal transduction pathway","secondary_identifiers":["GO:0052493"],"synonyms":[{"name":"disruption by symbiont of host signal transduction pathway","type":"exact"},{"name":"disruption of host signal transduction pathway","type":"exact"},{"name":"down regulation by symbiont of host signal transduction pathway","type":"exact"},{"name":"down-regulation by symbiont of host signal transduction pathway","type":"exact"},{"name":"downregulation by symbiont of host signal transduction pathway","type":"exact"},{"name":"inhibition by symbiont of host signal transduction pathway","type":"narrow"},{"name":"negative modulation by organism of host signal transduction pathway","type":"exact"},{"name":"negative regulation by organism of signal transduction in other organism involved in symbiotic interaction","type":"broad"},{"name":"negative regulation by symbiont of host signal transduction pathway","type":"exact"},{"name":"suppression by symbiont of host signal transduction pathway","type":"exact"}],"termid":"GO:0052029"}


id: GO:0061267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a mesonephric interstitial fibroblast over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal interstitial fibroblast development","termid":"GO:0072141"},{"relation_name":"part_of","term_name":"mesonephric interstitial fibroblast differentiation","termid":"GO:0061266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric interstitial fibroblast development","synonyms":[{"name":"mesonephros interstitial cell development","type":"exact"}],"termid":"GO:0061267"}


id: GO:0052043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of a host cellular component. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host cellular component (obsolete GO:0052043)","termid":"GO:0052043"}


id: PBO:0075645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sprouty RTK signaling antagonist 4","termid":"PBO:0075645"}


id: GO:0034839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (5R)-menth-2-enone + H2O = (5R)-3-hydroxymenthone.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete menth-2-enone hydratase activity (obsolete GO:0034839)","termid":"GO:0034839"}


id: PBO:0079211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific serine kinase 3","termid":"PBO:0079211"}


id: GO:0001740
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure found in a female mammalian cell containing an unpaired X chromosome that has become densely heterochromatic, silenced and localized at the nuclear periphery.","definition_xrefs":["NIF_Subcellular:sao1571698684","GOC:hjd","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear chromosome","termid":"GO:0000228"},{"relation_name":"is_a","term_name":"X chromosome","termid":"GO:0000805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"Barr body","secondary_identifiers":["Wikipedia:Barr_body"],"termid":"GO:0001740"}


id: MONDO:1012967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Liver disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"},{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"liver disorder, non-human animal","termid":"MONDO:1012967","xrefs":{"Monarch":{"xref_id":"1012967"}}}


id: GO:0010844
data:
  {"annotated_genes":["SJAG_00266","SJAG_02311"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92237,107468],"is_not":false,"summary":null,"term":"GO:0010844"}]},"cv_name":"molecular_function","definition":"Binding to a genomic region which promotes recombination.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"recombination hotspot binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA binding, recombination hotspot","type":"exact"}],"termid":"GO:0010844","terms_by_termid":{"GO:0010844":null}}


id: GO:0046565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-dehydroshikimate = 3,4-dihydroxybenzoate + H2O. 3,4-dihydroxybenzoate is also known as protocatechuate.","definition_xrefs":["MetaCyc:DHSHIKIMATE-DEHYDRO-RXN","EC:4.2.1.118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-dehydroshikimate dehydratase activity","secondary_identifiers":["RHEA:24848"],"termid":"GO:0046565"}


id: MONDO:0021497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the telencephalon.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of cerebral hemisphere","termid":"MONDO:0021374"},{"relation_name":"is_a","term_name":"benign neoplasm of brain","termid":"MONDO:0021451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of cerebrum","secondary_identifiers":["SCTID:275269004","NCIT:C8548","icd11.foundation:1857115524","UMLS:C0686378","MEDGEN:195785"],"synonyms":[{"name":"benign cerebral hemispheric neoplasm","type":"exact"},{"name":"benign cerebral hemispheric tumor","type":"exact"},{"name":"benign cerebral hemispheric tumour","type":"exact"},{"name":"benign cerebral neoplasm","type":"exact"},{"name":"benign cerebral tumor","type":"exact"},{"name":"benign cerebral tumour","type":"exact"},{"name":"benign neoplasm of cerebral hemispheres","type":"exact"},{"name":"benign neoplasm of the cerebral hemispheres","type":"exact"},{"name":"benign neoplasm of the cerebrum","type":"exact"},{"name":"benign tumor of cerebral hemispheres","type":"exact"},{"name":"benign tumor of cerebrum","type":"exact"},{"name":"benign tumor of the cerebral hemispheres","type":"exact"},{"name":"benign tumor of the cerebrum","type":"exact"},{"name":"benign tumour of cerebral hemispheres","type":"exact"},{"name":"benign tumour of cerebrum","type":"exact"},{"name":"benign tumour of the cerebral hemispheres","type":"exact"},{"name":"benign tumour of the cerebrum","type":"exact"},{"name":"telencephalon benign neoplasm","type":"exact"}],"termid":"MONDO:0021497","xrefs":{"Monarch":{"xref_id":"0021497"}}}


id: GO:0075159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism modulates the frequency, rate or extent of its G-protein alpha subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of G-protein alpha subunit-mediated signal transduction in response to host (obsolete GO:0075159)","synonyms":[{"name":"regulation of symbiont G-protein alpha subunit-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075159"}


id: FYPO:0004421
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the phosphorylation of serine residues in one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein serine phosphorylation during nitrogen starvation (obsolete FYPO:0004421)","synonyms":[{"name":"increased peptidyl-serine phosphorylation during nitrogen starvation","type":"exact"},{"name":"increased protein serine phosphorylation during cellular response to nitrogen starvation","type":"exact"},{"name":"increased protein serine phosphorylation during nitrogen depletion","type":"exact"},{"name":"increased protein serine phosphorylation during nitrogen deprivation","type":"exact"},{"name":"increased serine phosphorylation during nitrogen starvation","type":"exact"}],"termid":"FYPO:0004421"}


id: PBO:0088811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport protein Sft2","termid":"PBO:0088811"}


id: MONDO:0007435
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dentatorubral pallidoluysian atrophy (DRPLA) is a rare subtype of type I autosomal dominant cerebellar ataxia (ADCA type I). It is characterized by involuntary movements, ataxia, epilepsy, mental disorders, cognitive decline and prominent anticipation.","definition_xrefs":["Orphanet:101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Huntington disease-like syndrome","termid":"MONDO:0015548"},{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type IV","termid":"MONDO:0019794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"dentatorubral-pallidoluysian atrophy","secondary_identifiers":["ICD9:333.99","MEDGEN:155630","NCIT:C7636","SCTID:267581004","OMIM:125370","GARD:5643","UMLS:C0751781","SCTID:68116008","MESH:D020191","NANDO:1200043","DOID:0060162","NCIT:C122653"],"synonyms":[{"name":"DRPLA","type":"exact"},{"name":"Dentatorubropallidoluysian atrophy","type":"exact"},{"name":"NOD","type":"related"},{"name":"Naito Oyanagi disease","type":"related"},{"name":"Naito-Oyanagi disease","type":"exact"},{"name":"ataxia, chorea, seizures, and dementia","type":"related"},{"name":"dentatorubral pallidoluysian atrophy","type":"related"},{"name":"dentatorubral-pallidoluysian atrophy","type":"exact"},{"name":"haw River syndrome","type":"exact"},{"name":"myoclonic epilepsy with choreoathetosis","type":"related"}],"termid":"MONDO:0007435","xrefs":{"Monarch":{"xref_id":"0007435"}}}


id: PBO:0082558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ceramide-activated, type 2A-related serine-threonine phosphatase; functions in G1/S transition of mitotic cycle; controls lifespan, mitochondrial function, cell cycle progression by regulating HXK2 phosphorylation; regulator of COPII coat dephosphorylation; required for ER to Golgi traffic; interacts with Hrr25p kinase; cytoplasmic and nuclear protein that modulates functions mediated by Pkc1p including cell wall and actin cytoskeleton organization; similar to human PP6","termid":"PBO:0082558"}


id: GO:0009661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the chromoplast. A chromoplast is a plastid containing pigments other than chlorophyll, usually yellow and orange carotenoid pigments.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid organization","termid":"GO:0009657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chromoplast organization","synonyms":[{"name":"chromoplast organisation","type":"exact"},{"name":"chromoplast organization and biogenesis","type":"related"}],"termid":"GO:0009661"}


id: MONDO:0021966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare syndrome characterized by craniosynostosis (premature fusion of skull bones), hydrocephalus (an abnormal increase of cerebrospinal fluid in the ventricles of the brain) and abnormal development of the channel or duct in the middle of the brain that connects the third and fourth ventricles. This is an n-of-1 use case where only one patient or family has been described with this disorder.","definition_xrefs":["PMID:6730919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocephalus","termid":"MONDO:0001150"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"baker Vinters syndrome","secondary_identifiers":["MEDGEN:419861","UMLS:C2931659","MESH:C537899"],"synonyms":[{"name":"hydrocephalus with cerebral aqueductal dysgenesis and craniofacial anomalies","type":"related"}],"termid":"MONDO:0021966","xrefs":{"Monarch":{"xref_id":"0021966"}}}


id: PBO:0062435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 99 pseudogene","termid":"PBO:0062435"}


id: MONDO:0022818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital aneurysms of the great vessels","termid":"MONDO:0022818","xrefs":{"Monarch":{"xref_id":"0022818"}}}


id: PBO:0079304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 2","termid":"PBO:0079304"}


id: MONDO:0018875
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare cancer predisposition syndrome characterized by the early-onset of multiple primary cancers such as breast cancer, soft tissue and bone sarcomas, brain tumors and adrenal cortical carcinoma (ACC).","definition_xrefs":["Orphanet:524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Li-Fraumeni syndrome","secondary_identifiers":["MedDRA:10066795","GARD:6902","UMLS:C0085390","DOID:0111503","DOID:3012","icd11.foundation:1968061860","ICD9:V84.01","MEDGEN:88399","MESH:D016864","NORD:1913","OMIM:151623","OMIM:609266","NCIT:C3476","SCTID:428850001"],"synonyms":[{"name":"LFS","type":"exact"},{"name":"LFS1","type":"related"},{"name":"LFS3","type":"related"},{"name":"Li Fraumeni syndrome","type":"exact"},{"name":"Li-Fraumeni familial cancer susceptibility syndrome","type":"exact"},{"name":"Li-Fraumeni familiar cancer susceptibility syndrome","type":"exact"},{"name":"Li-Fraumeni syndrome","type":"exact"},{"name":"Li-Fraumeni syndrome caused by mutation in TP53","type":"exact"},{"name":"Li-Fraumeni-like syndrome","type":"related"},{"name":"SBLA syndrome","type":"exact"},{"name":"SBLA syndrome (sarcoma, breast, leukemia, and adrenal gland)","type":"related"},{"name":"TP53 Li-Fraumeni syndrome","type":"exact"},{"name":"sarcoma family syndrome of 51 and Fraumeni","type":"related"},{"name":"sarcoma family syndrome of Li and Fraumeni","type":"related"},{"name":"sarcoma, breast, leukaemia and adrenal gland syndrome","type":"exact"},{"name":"sarcoma, breast, leukemia and adrenal gland syndrome","type":"exact"}],"termid":"MONDO:0018875","xrefs":{"Monarch":{"xref_id":"0018875"}}}


id: PBO:0082219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-adaptin; large subunit of the clathrin associated protein complex (AP-2); involved in vesicle mediated transport","termid":"PBO:0082219"}


id: PBO:0000798
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.5.1.20","termid":"PBO:0000798"}


id: GO:0140906
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: R-CH + a halogen + oxygen donor = R-C-halogen +H2O.","definition_xrefs":["PMID:28466644","PMID:34368824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"halogenase activity","termid":"GO:0140906"}


id: PBO:0044458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 44, pseudogene","termid":"PBO:0044458"}


id: MONDO:1011712
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alloxan-diabetes, non-human animal","secondary_identifiers":["OMIA:000029"],"termid":"MONDO:1011712","xrefs":{"Monarch":{"xref_id":"1011712"}}}


id: PBO:0014618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoside-triphosphatase involved in SSU-rRNA maturation Fap7 (predicted)","termid":"PBO:0014618"}


id: MONDO:0003164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a cauda equina.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spinal cord cancer","termid":"MONDO:0003544"},{"relation_name":"is_a","term_name":"nerve root neoplasm","termid":"MONDO:0003103"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cauda equina neoplasm","secondary_identifiers":["DOID:4847","MEDGEN:220390","NCIT:C5479","UMLS:C1263892","SCTID:126963001"],"synonyms":[{"name":"Cauda equina neoplasms","type":"exact"},{"name":"cauda equina neoplasm (disease)","type":"exact"},{"name":"cauda equina tumor","type":"exact"},{"name":"cauda equina tumour","type":"exact"},{"name":"neoplasm of cauda equina","type":"exact"},{"name":"neoplasm of the Cauda equina","type":"exact"},{"name":"tumor of Cauda equina","type":"exact"},{"name":"tumor of cauda equina","type":"exact"},{"name":"tumor of the Cauda equina","type":"exact"},{"name":"tumour of Cauda equina","type":"exact"},{"name":"tumour of cauda equina","type":"exact"},{"name":"tumour of the Cauda equina","type":"exact"}],"termid":"MONDO:0003164","xrefs":{"Monarch":{"xref_id":"0003164"}}}


id: MONDO:0019135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete paracoccidioidomycosis (obsolete MONDO:0019135)","termid":"MONDO:0019135","xrefs":{"Monarch":{"xref_id":"0019135"}}}


id: GO:0050269
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: coniferyl aldehyde + H2O + NAD(P)+ = ferulate + NAD(P)H + H+.","definition_xrefs":["EC:1.2.1.68"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase [NAD(P)+] activity","termid":"GO:0004030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"coniferyl-aldehyde dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-1241"],"synonyms":[{"name":"coniferyl aldehyde:NAD(P)+ oxidoreductase activity","type":"related"}],"termid":"GO:0050269"}


id: GO:0042034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a C-terminal peptidyl-lysine to form peptidyl-L-lysine methyl ester.","definition_xrefs":["RESID:AA0318"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-lysine methyl ester biosynthetic process from peptidyl-lysine (obsolete GO:0042034)","synonyms":[{"name":"peptidyl-lysine esterification","type":"exact"}],"termid":"GO:0042034"}


id: PBO:0084522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the ChAPs (Chs5p-Arf1p-binding proteins) family; part of the exomer complex with Chs5p to mediate export of specific cargo proteins, including Chs3p, from the Golgi to the plasma membrane; BCH2 has a paralog, CHS6, that arose from the whole genome duplication","termid":"PBO:0084522"}


id: PBO:0091459
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.3197528_3197529insG","termid":"PBO:0091459"}


id: PBO:0017410
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-instance_of","termid":"PBO:0017410"}


id: MONDO:0011208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malignant atrophic papulosis (MAP) is a rare, chronic, thrombo-obliterative vasculopathy characterized by papular skin lesions with central porcelain-white atrophy and a surrounding teleangiectatic rim. Systemic lesions may affect the gastrointestinal tract and the central nervous system (CNS) and are potentially lethal.","definition_xrefs":["Orphanet:679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin vascular disease","termid":"MONDO:0019293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"malignant atrophic papulosis","secondary_identifiers":["UMLS:C0221011","MedDRA:10064281","icd11.foundation:792094526","MEDGEN:113138","NORD:1036","OMIM:602248","SCTID:400171002","NCIT:C84835","ICD9:447.8","MESH:D054853","GARD:6249"],"synonyms":[{"name":"Degos Disease","type":"exact"},{"name":"Degos disease","type":"exact"},{"name":"Degos syndrome","type":"related"},{"name":"Degos's malignant atrophic papulosis","type":"related"},{"name":"Kohlmeier-Degos disease","type":"exact"},{"name":"Kohlmeier-Degos-Delort-Tricort syndrome","type":"exact"},{"name":"Köhlmeier-Degos disease","type":"exact"},{"name":"Köhlmeier-Degos-Delort-Tricort syndrome","type":"exact"},{"name":"atrophic papulosis, malignant","type":"related"},{"name":"malignant atrophic papulosis","type":"exact"},{"name":"papulosis atrophican maligna","type":"exact"},{"name":"papulosis, malignant atrophic","type":"related"}],"termid":"MONDO:0011208","xrefs":{"Monarch":{"xref_id":"0011208"}}}


id: MONDO:0043543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any adverse condition in a patient occurring as the result of treatment by a physician, surgeon, or other health professional, especially infections acquired by a patient during the course of treatment.","definition_xrefs":["MESH:D007049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iatrogenic disease","secondary_identifiers":["SCTID:12456005","ICD9:799.9","MEDGEN:9393","UMLS:C0020732","ICD10CM:T80-T88"],"synonyms":[{"name":"condition, hospital-acquired","type":"related"},{"name":"conditions, hospital-acquired","type":"related"},{"name":"disease, iatrogenic","type":"related"},{"name":"diseases, iatrogenic","type":"related"},{"name":"hospital acquired condition","type":"related"},{"name":"hospital-acquired condition","type":"related"},{"name":"hospital-acquired conditions","type":"related"},{"name":"iatrogenic diseases","type":"related"},{"name":"iatrogenic disorder","type":"exact"}],"termid":"MONDO:0043543","xrefs":{"Monarch":{"xref_id":"0043543"}}}


id: PR:Q10195
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC11C11.06c gene.","definition_xrefs":["UniProtKB:Q10195","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11C11.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.06c","synonyms":[{"name":"Spom972h-SPBC11C11.06c","type":"exact"}],"termid":"PR:Q10195"}


id: PBO:0052988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactalbumin alpha","termid":"PBO:0052988"}


id: GO:1902958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitochondrial electron transport, NADH to ubiquinone.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:dph","PMID:23530063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular respiration","termid":"GO:1901857"},{"relation_name":"is_a","term_name":"regulation of mitochondrial electron transport, NADH to ubiquinone","termid":"GO:1902956"},{"relation_name":"positively_regulates","term_name":"mitochondrial electron transport, NADH to ubiquinone","termid":"GO:0006120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"positive regulation of mitochondrial electron transport, NADH to ubiquinone","synonyms":[{"name":"activation of complex I (NADH to ubiquinone)","type":"related"},{"name":"activation of mitochondrial electron transport, NADH to ubiquinone","type":"narrow"},{"name":"activation of oxidative phosphorylation, NADH to ubiquinone","type":"narrow"},{"name":"positive regulation of complex I (NADH to ubiquinone)","type":"related"},{"name":"positive regulation of oxidative phosphorylation, NADH to ubiquinone","type":"exact"},{"name":"up regulation of complex I (NADH to ubiquinone)","type":"related"},{"name":"up regulation of mitochondrial electron transport, NADH to ubiquinone","type":"exact"},{"name":"up regulation of oxidative phosphorylation, NADH to ubiquinone","type":"exact"},{"name":"up-regulation of complex I (NADH to ubiquinone)","type":"related"},{"name":"up-regulation of mitochondrial electron transport, NADH to ubiquinone","type":"exact"},{"name":"up-regulation of oxidative phosphorylation, NADH to ubiquinone","type":"exact"},{"name":"upregulation of complex I (NADH to ubiquinone)","type":"related"},{"name":"upregulation of mitochondrial electron transport, NADH to ubiquinone","type":"exact"},{"name":"upregulation of oxidative phosphorylation, NADH to ubiquinone","type":"exact"}],"termid":"GO:1902958"}


id: GO:0097282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The inhibition of an antigen's biological effects by antibody binding to it. An example is neutralization of diphtheria toxin by preventing its entry into human cells via the binding of antibody specific for diphtheria toxin.","definition_xrefs":["GOC:rv","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin mediated immune response","termid":"GO:0016064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immunoglobulin-mediated neutralization","synonyms":[{"name":"antibody-mediated neutralization","type":"exact"}],"termid":"GO:0097282"}


id: MOD:02049
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-isoleucine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-isoleucine residue","termid":"MOD:00910"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-isoleucine residue","synonyms":[{"name":"XlnkIle","type":"exact"}],"termid":"MOD:02049"}


id: FYPO:0004351
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is increased during a cellular response to methylglyoxal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to nucleus during vegetative growth","termid":"FYPO:0001130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to nucleus during cellular response to methylglyoxal","synonyms":[{"name":"increased protein localisation to nucleus during cellular response to methylglyoxal","type":"exact"},{"name":"increased protein localization to nucleus during cellular response to methylglyoxal during mitotic cell cycle","type":"related"},{"name":"increased protein localization to nucleus during cellular response to methylglyoxal during vegetative growth","type":"exact"}],"termid":"FYPO:0004351"}


id: GO:0055111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of individual cells into the embryo involved in deuterostomic gastrulation.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in gastrulation","termid":"GO:0042074"},{"relation_name":"part_of","term_name":"gastrulation with mouth forming second","termid":"GO:0001702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ingression involved in gastrulation with mouth forming second","termid":"GO:0055111"}


id: MONDO:0021326
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the cervical part of esophagus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal cancer","termid":"MONDO:0007576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"malignant neoplasm of cervical esophagus","secondary_identifiers":["NCIT:C4763","MEDGEN:141674","UMLS:C0496773","ICD9:150.0","SCTID:187722004"],"synonyms":[{"name":"cancer of cervical part of esophagus","type":"exact"},{"name":"cancer of cervical part of oesophagus","type":"exact"},{"name":"cervical part of esophagus cancer","type":"exact"},{"name":"cervical part of oesophagus cancer","type":"exact"},{"name":"malignant cervical part of esophagus neoplasm","type":"exact"},{"name":"malignant cervical part of oesophagus neoplasm","type":"exact"},{"name":"malignant neoplasm of cervical part of esophagus","type":"exact"},{"name":"malignant neoplasm of cervical part of oesophagus","type":"exact"},{"name":"malignant neoplasm of the cervical esophagus","type":"exact"},{"name":"malignant neoplasm of the cervical oesophagus","type":"exact"}],"termid":"MONDO:0021326","xrefs":{"Monarch":{"xref_id":"0021326"}}}


id: GO:0031522
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane protein complex involved in the translocation of proteins across the cytoplasmic membrane. In Gram-negative bacteria, Sec-translocated proteins are subsequently secreted via the type II, IV, or V secretion systems. Sec complex components include SecA, D, E, F, G, Y and YajC.","definition_xrefs":["GOC:mtg_sensu","PMID:15223057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cell envelope Sec protein transport complex","synonyms":[{"name":"Sec complex","type":"broad"},{"name":"Sec secretion complex","type":"narrow"},{"name":"Sec translocation complex","type":"narrow"},{"name":"plasma membrane Sec complex","type":"related"}],"termid":"GO:0031522"}


id: PBO:0051390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda constant 7","termid":"PBO:0051390"}


id: MONDO:0015376
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cysts and fistulae of the face and oral cavity","termid":"MONDO:0015476"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"first branchial cleft anomaly","secondary_identifiers":["Orphanet:141013","MEDGEN:848144","UMLS:C3874320","icd11.foundation:1956658224","SCTID:73371000119103","GARD:19934"],"synonyms":[{"name":"first branchial cleft cyst","type":"exact"},{"name":"first branchial cleft fistula","type":"exact"}],"termid":"MONDO:0015376","xrefs":{"Monarch":{"xref_id":"0015376"}}}


id: PBO:0068514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 105, pseudogene","termid":"PBO:0068514"}


id: GO:1900996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of benzene.","definition_xrefs":["UniPathway:UPA00272","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene metabolic process","termid":"GO:0018910"},{"relation_name":"is_a","term_name":"hydrocarbon catabolic process","termid":"GO:0120253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"benzene catabolic process","synonyms":[{"name":"benzene breakdown","type":"exact"},{"name":"benzene catabolism","type":"exact"},{"name":"benzene degradation","type":"exact"}],"termid":"GO:1900996"}


id: PBO:0044184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTNS antisense RNA 1","termid":"PBO:0044184"}


id: GO:2000764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of semaphorin-plexin signaling pathway involved in outflow tract morphogenesis.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of semaphorin-plexin signaling pathway","termid":"GO:2001262"},{"relation_name":"positively_regulates","term_name":"semaphorin-plexin signaling pathway involved in outflow tract morphogenesis","termid":"GO:0071527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of semaphorin-plexin signaling pathway involved in outflow tract morphogenesis","synonyms":[{"name":"positive regulation of semaphorin-plexin signalling pathway involved in outflow tract morphogenesis","type":"exact"}],"termid":"GO:2000764"}


id: FYPO:0006127
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein oligomerization is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein oligomerization","termid":"FYPO:0005220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased protein oligomerization","synonyms":[{"name":"increased protein oligomerization during mitotic cell cycle","type":"related"},{"name":"increased protein oligomerization during vegetative growth","type":"exact"}],"termid":"FYPO:0006127"}


id: PR:Q9P6J0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1683.12 gene.","definition_xrefs":["UniProtKB:Q9P6J0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C1683.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.12","synonyms":[{"name":"Spom972h-SPBC1683.12","type":"exact"}],"termid":"PR:Q9P6J0"}


id: PBO:0061822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 12 Y-linked","termid":"PBO:0061822"}


id: PBO:0080236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitelline membrane outer layer 1 homolog","termid":"PBO:0080236"}


id: PBO:0083293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; open reading frame overlaps the verified gene GCY1/YOR120W","termid":"PBO:0083293"}


id: MONDO:0042601
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Samson-Gardner syndrome","secondary_identifiers":["UMLS:C2931448","MEDGEN:419807","MESH:C537230"],"synonyms":[{"name":"Samson Gardner syndrome","type":"related"},{"name":"craniosynostosis, microcephaly, hydrancephaly, humero-radial synostosis, and thumb aplasia","type":"related"}],"termid":"MONDO:0042601","xrefs":{"Monarch":{"xref_id":"0042601"}}}


id: MONDO:0005289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the paranasal sinuses. Representative examples of benign neoplasms include Schneiderian papilloma and salivary gland-type adenoma. Representative examples of malignant neoplasms include carcinoma and lymphoma.","definition_xrefs":["NCIT:C7488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus disorder","termid":"MONDO:0001735"},{"relation_name":"is_a","term_name":"skull neoplasm","termid":"MONDO:0024653"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paranasal sinus neoplasm","secondary_identifiers":["UMLS:C0030470","MEDGEN:18296","EFO:0003866","SCTID:126675008","HP:0030072","DOID:1350"],"synonyms":[{"name":"accessory sinus neoplasm","type":"exact"},{"name":"accessory sinus tumor","type":"exact"},{"name":"accessory sinus tumour","type":"exact"},{"name":"neoplasm of accessory sinus","type":"exact"},{"name":"neoplasm of paranasal sinus","type":"exact"},{"name":"neoplasm of the accessory sinus","type":"exact"},{"name":"neoplasm of the paranasal sinus","type":"exact"},{"name":"paranasal sinus neoplasm","type":"exact"},{"name":"paranasal sinus neoplasm (disease)","type":"exact"},{"name":"paranasal sinus neoplasms","type":"exact"},{"name":"paranasal sinus tumor","type":"exact"},{"name":"paranasal sinus tumour","type":"exact"},{"name":"tumor of accessory sinus","type":"exact"},{"name":"tumor of paranasal sinus","type":"exact"},{"name":"tumor of the accessory sinus","type":"exact"},{"name":"tumor of the paranasal sinus","type":"exact"},{"name":"tumour of accessory sinus","type":"exact"},{"name":"tumour of paranasal sinus","type":"exact"},{"name":"tumour of the accessory sinus","type":"exact"},{"name":"tumour of the paranasal sinus","type":"exact"}],"termid":"MONDO:0005289","xrefs":{"Monarch":{"xref_id":"0005289"}}}


id: PBO:0052418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kirre like nephrin family adhesion molecule 1","termid":"PBO:0052418"}


id: PBO:0005651
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates Pka1 pathway genes","termid":"PBO:0005651"}


id: MONDO:0100034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cerebral folate deficiency is defined as a neurological syndrome associated with low CSF 5-methyltetrahydrofolate (5MTHF), the active folate metabolite, in the presence of normal folate metabolism outside the nervous system. Cerebral folate deficiency can result from either disturbed folate transport or from increased folate turnover within the central nervous system.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"metabolic epilepsy","termid":"MONDO:0100033"},{"relation_name":"is_a","term_name":"inborn vitamin metabolic disorder","termid":"MONDO:0005528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"cerebral folate deficiency","secondary_identifiers":["MEDGEN:893131","UMLS:C4022901","icd11.foundation:1137222547"],"termid":"MONDO:0100034","xrefs":{"Monarch":{"xref_id":"0100034"}}}


id: PR:Q10413
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1F3.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F3.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.08c","synonyms":[{"name":"Spom972h-SPAC1F3.08c","type":"exact"}],"termid":"PR:Q10413"}


id: PBO:0060183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 3B, cell surface associated","termid":"PBO:0060183"}


id: PBO:0045403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA3 pseudogene 5","termid":"PBO:0045403"}


id: SO:0001103
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the polypeptide molecule, interacts selectively and non-covalently with zinc ions.","definition_xrefs":["EBIBS:GAR","SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_metal_contact","termid":"SO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_zinc_ion_contact_site","secondary_identifiers":["BS:00185"],"synonyms":[{"name":"Zn_contact_site","type":"exact"},{"name":"polypeptide zinc ion contact site","type":"exact"}],"termid":"SO:0001103"}


id: GO:0032500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacting selectively and non-covalently, in a non-covalent manner, with muramyl dipeptide; muramyl dipeptide is derived from peptidoglycan.","definition_xrefs":["GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"muramyl dipeptide binding","termid":"GO:0032500"}


id: MONDO:0027667
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"efavirenz toxicity","secondary_identifiers":["Orphanet:240869"],"termid":"MONDO:0027667","xrefs":{"Monarch":{"xref_id":"0027667"}}}


id: PBO:0035953
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K8_acetylation_during_vegetative_growth","termid":"PBO:0035953"}


id: PBO:0042334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD63 molecule","termid":"PBO:0042334"}


id: MONDO:0009269
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any geleophysic dysplasia in which the cause of the disease is a mutation in the ADAMTSL2 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"geleophysic dysplasia","termid":"MONDO:0000127"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geleophysic dysplasia 1","secondary_identifiers":["GARD:15172","UMLS:C3278147","DOID:0111725","MEDGEN:479777","OMIM:231050"],"synonyms":[{"name":"ADAMTSL2 geleophysic dysplasia","type":"exact"},{"name":"GELEOPHYSIC dysplasia 1","type":"related"},{"name":"GPHYSD1","type":"related"},{"name":"Geleophysic dysplasia type 1","type":"exact"},{"name":"geleophysic dysplasia 1","type":"exact"},{"name":"geleophysic dysplasia caused by mutation in ADAMTSL2","type":"exact"}],"termid":"MONDO:0009269","xrefs":{"Monarch":{"xref_id":"0009269"}}}


id: MONDO:0012633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malaria (obsolete MONDO:0012633)","termid":"MONDO:0012633","xrefs":{"Monarch":{"xref_id":"0012633"}}}


id: MONDO:0006405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infrequent small cell carcinoma that arises from the salivary glands and is characterized by the presence of a high number of mitotic figures.","definition_xrefs":["NCIT:C35703"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell carcinoma","termid":"MONDO:0000402"},{"relation_name":"is_a","term_name":"salivary gland carcinoma","termid":"MONDO:0000521"},{"relation_name":"is_a","term_name":"digestive system neuroendocrine neoplasm","termid":"MONDO:0024503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"salivary gland small cell carcinoma","secondary_identifiers":["UMLS:C1335982","EFO:1000519","MEDGEN:234786"],"synonyms":[{"name":"anaplastic small cell carcinoma of salivary gland","type":"exact"},{"name":"anaplastic small cell carcinoma of the salivary gland","type":"exact"},{"name":"neuroendocrine carcinoma of salivary gland","type":"exact"},{"name":"neuroendocrine carcinoma of the salivary gland","type":"exact"},{"name":"saliva-secreting gland small cell carcinoma","type":"exact"},{"name":"salivary gland anaplastic small cell carcinoma","type":"exact"},{"name":"salivary gland neuroendocrine carcinoma","type":"related"},{"name":"salivary gland small cell carcinoma","type":"exact"},{"name":"small cell carcinoma of saliva-secreting gland","type":"exact"},{"name":"small cell salivary gland carcinoma","type":"exact"}],"termid":"MONDO:0006405","xrefs":{"Monarch":{"xref_id":"0006405"}}}


id: PBO:0076447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAFA chemokine like family member 3","termid":"PBO:0076447"}


id: GO:1903105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of insulin receptor signaling pathway involved in determination of adult lifespan.","definition_xrefs":["GOC:TermGenie","GOC:kmv","PMID:19853560","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of insulin receptor signaling pathway involved in determination of adult lifespan (obsolete GO:1903105)","synonyms":[{"name":"down regulation of daf-2 receptor signaling pathway of determination of adult lifespan","type":"narrow"},{"name":"down regulation of insulin receptor signaling pathway involved in determination of adult lifespan","type":"exact"},{"name":"down regulation of insulin receptor signaling pathway of determination of adult lifespan","type":"exact"},{"name":"down regulation of insulin receptor signalling pathway of determination of adult lifespan","type":"exact"},{"name":"down-regulation of daf-2 receptor signaling pathway of determination of adult lifespan","type":"narrow"},{"name":"down-regulation of insulin receptor signaling pathway involved in determination of adult lifespan","type":"exact"},{"name":"down-regulation of insulin receptor signaling pathway of determination of adult lifespan","type":"exact"},{"name":"down-regulation of insulin receptor signalling pathway of determination of adult lifespan","type":"exact"},{"name":"downregulation of daf-2 receptor signaling pathway of determination of adult lifespan","type":"narrow"},{"name":"downregulation of insulin receptor signaling pathway involved in determination of adult lifespan","type":"exact"},{"name":"downregulation of insulin receptor signaling pathway of determination of adult lifespan","type":"exact"},{"name":"downregulation of insulin receptor signalling pathway of determination of adult lifespan","type":"exact"},{"name":"inhibition of daf-2 receptor signaling pathway of determination of adult lifespan","type":"narrow"},{"name":"inhibition of insulin receptor signaling pathway involved in determination of adult lifespan","type":"narrow"},{"name":"inhibition of insulin receptor signaling pathway of determination of adult lifespan","type":"narrow"},{"name":"inhibition of insulin receptor signalling pathway of determination of adult lifespan","type":"narrow"},{"name":"negative regulation of daf-2 receptor signaling pathway of determination of adult lifespan","type":"narrow"},{"name":"negative regulation of insulin receptor signaling pathway of determination of adult lifespan","type":"exact"},{"name":"negative regulation of insulin receptor signalling pathway of determination of adult lifespan","type":"exact"}],"termid":"GO:1903105"}


id: PBO:0001057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curved DNA-binding protein Cdb4, peptidase family","termid":"PBO:0001057"}


id: MONDO:0010363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any non-syndromic X-linked intellectual disability in which the cause of the disease is a mutation in the ZDHHC15 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 91","secondary_identifiers":["UMLS:C1845142","MEDGEN:375592","DOID:0112043","MESH:C564482","OMIM:300577"],"synonyms":[{"name":"MRX91","type":"related"},{"name":"ZDHHC15 non-syndromic X-linked intellectual disability","type":"exact"},{"name":"intellectual disability, X-linked 91","type":"exact"},{"name":"intellectual disability, X-linked type 91","type":"exact"},{"name":"mental retardation, X-linked 91","type":"related"},{"name":"mental retardation, X-linked 91, X-linked dominant","type":"exact"},{"name":"mental retardation, X-linked type 91","type":"exact"},{"name":"non-syndromic X-linked intellectual disability caused by mutation in ZDHHC15","type":"exact"}],"termid":"MONDO:0010363","xrefs":{"Monarch":{"xref_id":"0010363"}}}


id: GO:0045842
data:
  {"annotated_genes":["SJAG_01679","SJAG_04259","SJAG_02380","SJAG_02169","SJAG_00883","SJAG_03681","SJAG_02451","SJAG_02336","SJAG_04968","SJAG_03048","SJAG_04573","SJAG_02498","SJAG_01297","SJAG_03126","SJAG_03353","SJAG_01805","SJAG_00666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93287,97188,99635,101610,101883,110866,111454,113764,114265],"is_not":false,"summary":null,"term":"GO:0045842"},{"annotations":[103394,115397,113763,99089,107739,113275,90204,111451,106723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[93685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the cell cycle process in which a cell progresses from metaphase to anaphase during mitosis, triggered by the activation of the anaphase promoting complex by Cdc20/Sleepy homolog which results in the degradation of Securin.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic metaphase/anaphase transition","termid":"GO:0030071"},{"relation_name":"is_a","term_name":"positive regulation of mitotic nuclear division","termid":"GO:0045840"},{"relation_name":"is_a","term_name":"positive regulation of mitotic sister chromatid separation","termid":"GO:1901970"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle phase transition","termid":"GO:1901992"},{"relation_name":"is_a","term_name":"positive regulation of metaphase/anaphase transition of cell cycle","termid":"GO:1902101"},{"relation_name":"positively_regulates","term_name":"metaphase/anaphase transition of mitotic cell cycle","termid":"GO:0007091"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00666":null,"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null,"SJAG_04573":null,"SJAG_04968":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"positively_regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0044772","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic metaphase/anaphase transition","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of mitotic metaphase/anaphase transition","type":"narrow"},{"name":"stimulation of mitotic metaphase/anaphase transition","type":"narrow"},{"name":"up regulation of mitotic metaphase/anaphase transition","type":"exact"},{"name":"up-regulation of mitotic metaphase/anaphase transition","type":"exact"},{"name":"upregulation of mitotic metaphase/anaphase transition","type":"exact"}],"termid":"GO:0045842","terms_by_termid":{"GO:0045842":null,"GO:0140499":null,"GO:1902426":null}}


id: GO:0043708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell to a solid substrate, via cell adhesion molecules, contributing to the formation of a biofilm.","definition_xrefs":["GOC:tb","GOC:dph","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate adhesion","termid":"GO:0031589"},{"relation_name":"part_of","term_name":"submerged biofilm formation","termid":"GO:0090605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell adhesion involved in biofilm formation","synonyms":[{"name":"cell adhesion during biofilm formation","type":"related"}],"termid":"GO:0043708"}


id: PBO:0070338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 10","termid":"PBO:0070338"}


id: PBO:0013131
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae PUS1","termid":"PBO:0013131"}


id: GO:1904364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcitonin secretion.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:11278900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptide hormone secretion","termid":"GO:0090277"},{"relation_name":"is_a","term_name":"regulation of calcitonin secretion","termid":"GO:1904362"},{"relation_name":"positively_regulates","term_name":"calcitonin secretion","termid":"GO:0036161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"positive regulation of calcitonin secretion","synonyms":[{"name":"activation of calcitonin secretion","type":"narrow"},{"name":"up regulation of calcitonin secretion","type":"exact"},{"name":"up-regulation of calcitonin secretion","type":"exact"},{"name":"upregulation of calcitonin secretion","type":"exact"}],"termid":"GO:1904364"}


id: RO:HOM0000003
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Similarity that is characterized by the organization of anatomical structures through the expression of homologous or identical patterning genes.","direct_ancestors":[{"relation_name":"is_a","term_name":"evolutionarily_related_to","termid":"RO:0002320"},{"relation_name":"is_a","term_name":"in_similarity_relationship_with","termid":"RO:HOM0000000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_homocracy_relationship_with","synonyms":[{"name":"homocracous to","type":"exact"}],"termid":"RO:HOM0000003"}


id: PBO:0027304
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_thioredoxin-disulfide_reductase_activity","termid":"PBO:0027304"}


id: PBO:0079003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon CGT) 3-1","termid":"PBO:0079003"}


id: FYPO:0007292
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of UDP-galactose measured in the cytosol is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cytosol","termid":"FYPO:0001948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cytosolic UDP-galactose level","synonyms":[{"name":"increased cytosolic UDP-D-galactose level","type":"exact"},{"name":"increased cytosolic UDP-galactose level during mitotic cell cycle","type":"related"},{"name":"increased cytosolic UDP-galactose level during vegetative growth","type":"exact"},{"name":"increased level of UDP-galactose in cytosol","type":"exact"}],"termid":"FYPO:0007292"}


id: PR:C6Y4B7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC227.19c gene.","definition_xrefs":["UniProtKB:C6Y4B7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C227.19c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.19c","synonyms":[{"name":"Spom972h-SPAC227.19c","type":"exact"}],"termid":"PR:C6Y4B7"}


id: PBO:0005759
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bucentaur or craniofacial development","termid":"PBO:0005759"}


id: GO:0016136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of saponins, glycosides of plants in which the aglycan (sapogenin) group is a terpene or steroid and the sugar group is a glucose, a galactose, a pentose, a methylpentose or an oligosaccharide. Saponins are powerful surfactant agents and membrane active; they are, hence, toxic to animals on injection.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"saponin metabolic process","termid":"GO:0016134"},{"relation_name":"is_a","term_name":"glycoside catabolic process","termid":"GO:0016139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"saponin catabolic process","synonyms":[{"name":"saponin breakdown","type":"exact"},{"name":"saponin catabolism","type":"exact"},{"name":"saponin degradation","type":"exact"}],"termid":"GO:0016136"}


id: GO:0047231
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyridoxine + UDP-D-glucose = 5'-O-beta-D-glucosylpyridoxine + H+ + UDP.","definition_xrefs":["EC:2.4.1.160","RHEA:20177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pyridoxine 5'-O-beta-D-glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.160-RXN","KEGG_REACTION:R01912"],"synonyms":[{"name":"UDP-glucose-pyridoxine glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:pyridoxine 5'-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:pyridoxine 5'-O-beta-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:pyridoxine 5'-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-pyridoxine 5'-beta-glucosyltransferase activity","type":"related"}],"termid":"GO:0047231"}


id: PBO:0047524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"free fatty acid receptor 4","termid":"PBO:0047524"}


id: PBO:0077213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 9 superfamily member 4","termid":"PBO:0077213"}


id: MONDO:0019366
data:
  {"annotated_genes":["SJAG_04706","SJAG_05182","SJAG_02139","SJAG_05175","SJAG_04295"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84867,84864,84865,84866,84868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010027"},{"annotations":[84853,84850,84849,84851,84852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011449"}]},"cv_name":"mondo","definition":"Free sialic acid storage disease (free SASD), is a group of lysosomal storage diseases characterized by a spectrum of clinical manifestations including neurological and developmental disorders with severity ranging from the milder phenotype, Salla disease (SD), to the most severe phenotype, infantile free sialic acid storage disease (ISSD).","definition_xrefs":["Orphanet:834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of lysosomal amino acid transport","termid":"MONDO:0019246"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02139":null,"SJAG_04295":null,"SJAG_04706":null,"SJAG_05175":null,"SJAG_05182":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561"],"is_obsolete":false,"name":"free sialic acid storage disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C2931872","SCTID:278991002","MESH:C538523","MEDGEN:419512","GARD:10870","icd11.foundation:1817428569","NANDO:1200146","MedDRA:10067529","NANDO:2200572","MedDRA:10067531"],"synonyms":[{"name":"free sialic acid storage disease","type":"exact"}],"termid":"MONDO:0019366","terms_by_termid":{"MONDO:0010027":null,"MONDO:0011449":null},"xrefs":{"Monarch":{"xref_id":"0019366"}}}


id: MONDO:0017767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A post-bacterial multisystem inflammatory disease occurring as a post-infectious, nonsuppurative sequela of untreated streptococcus pyogenes (Group A streptococcus [GAS]) pharyngitis, and mainly occurs in individuals aged 5 to 15 years. The most common presenting signs are fever, migratory polyarthritis and carditis.","definition_xrefs":["Orphanet:3099"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"connective tissue disorder","termid":"MONDO:0003900"},{"relation_name":"excluded_subClassOf","term_name":"bacterial infectious disease","termid":"MONDO:0005113"},{"relation_name":"excluded_subClassOf","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"},{"relation_name":"is_a","term_name":"post-bacterial disorder","termid":"MONDO:0021673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rheumatic fever","secondary_identifiers":["DOID:1586","GARD:5699","NORD:1668","MedDRA:10039054","ICD10CM:I00-I02","MESH:D012213","ICD9:390","NCIT:C34984","SCTID:58718002","SCTID:81077008","ICD9:390-392.99","UMLS:C0035436","MEDGEN:48448","EFO:1001160"],"synonyms":[{"name":"ARF","type":"exact"},{"name":"RHF - rheumatic fever","type":"exact"},{"name":"acute rheumatic fever","type":"exact"},{"name":"inflammatory rheumatism","type":"related"}],"termid":"MONDO:0017767","xrefs":{"Monarch":{"xref_id":"0017767"}}}


id: PBO:0073570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shisa family member 3","termid":"PBO:0073570"}


id: GO:0016627
data:
  {"annotated_genes":["SJAG_02151","SJAG_04107","SJAG_01041","SJAG_00203","SJAG_02291","SJAG_03236","SJAG_01362","SJAG_01671","SJAG_02717","SJAG_00174","SJAG_04944","SJAG_04954","SJAG_00197","SJAG_03024","SJAG_04810","SJAG_02007","SJAG_03240","SJAG_00260","SJAG_04652","SJAG_02876","SJAG_01786"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61209,100164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003865"},{"annotations":[92329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004109"},{"annotations":[103962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050613"},{"annotations":[92028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000246"},{"annotations":[97998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106430"},{"annotations":[97999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004152"},{"annotations":[100243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004318"},{"annotations":[94494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141148"},{"annotations":[89650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016156"},{"annotations":[91828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070819"},{"annotations":[88935,109128,117918,104189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106414"},{"annotations":[101087,101086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016628"},{"annotations":[91829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004729"},{"annotations":[61203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160198"},{"annotations":[99507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102389"},{"annotations":[97290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043115"},{"annotations":[114304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008977"},{"annotations":[114305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004665"},{"annotations":[88297,88665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008177"},{"annotations":[110814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019166"},{"annotations":[109129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102262"},{"annotations":[109130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102263"},{"annotations":[104190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102264"},{"annotations":[117919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102266"},{"annotations":[117920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102267"},{"annotations":[88936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102265"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["EC:1.3.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00174":null,"SJAG_00197":null,"SJAG_00203":null,"SJAG_00260":null,"SJAG_01041":null,"SJAG_01362":null,"SJAG_01671":null,"SJAG_01786":null,"SJAG_02007":null,"SJAG_02151":null,"SJAG_02291":null,"SJAG_02717":null,"SJAG_02876":null,"SJAG_03024":null,"SJAG_03236":null,"SJAG_03240":null,"SJAG_04107":null,"SJAG_04652":null,"SJAG_04810":null,"SJAG_04944":null,"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-CH group of donors","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2995334","Reactome:R-HSA-9661710"],"synonyms":[{"name":"oxidoreductase activity, acting on the CH-CH group of donors, other acceptors","type":"narrow"}],"termid":"GO:0016627","terms_by_termid":{"GO:0000246":null,"GO:0003865":null,"GO:0004109":null,"GO:0004152":null,"GO:0004318":null,"GO:0004665":null,"GO:0004729":null,"GO:0008177":null,"GO:0008977":null,"GO:0016156":null,"GO:0016628":null,"GO:0019166":null,"GO:0043115":null,"GO:0050613":null,"GO:0070819":null,"GO:0102262":null,"GO:0102263":null,"GO:0102264":null,"GO:0102265":null,"GO:0102266":null,"GO:0102267":null,"GO:0102389":null,"GO:0106414":null,"GO:0106430":null,"GO:0141148":null,"GO:0160198":null}}


id: PBO:0002083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosamine-phosphate N-acetyltransferase (predicted)","termid":"PBO:0002083"}


id: GO:0043171
data:
  {"annotated_genes":["SJAG_01430","SJAG_01088","SJAG_00181"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100542,105248,113946],"is_not":false,"summary":null,"term":"GO:0043171"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide metabolic process","termid":"GO:0006518"},{"relation_name":"is_a","term_name":"cellular catabolic process","termid":"GO:0044248"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00181":null,"SJAG_01088":null,"SJAG_01430":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"peptide catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"peptide breakdown","type":"exact"},{"name":"peptide catabolism","type":"exact"},{"name":"peptide degradation","type":"exact"}],"termid":"GO:0043171","terms_by_termid":{"GO:0043171":null}}


id: MONDO:0005265
data:
  {"annotated_genes":["SJAG_03363","SJAG_03136"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012610"},{"annotations":[86849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012831"}]},"cv_name":"mondo","definition":"A spectrum of small and large bowel inflammatory diseases of unknown etiology. It includes Crohn's disease, ulcerative colitis, and colitis of indeterminate type.","definition_xrefs":["NCIT:C3138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03136":null,"SJAG_03363":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory bowel disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2100259","SCTID:24526004","UMLS:C0021390","OMIMPS:266600","DOID:0050589","EFO:0003767","ICD9:558.9","MESH:D015212","MEDGEN:43877"],"synonyms":[{"name":"IBD","type":"exact"},{"name":"autoimmune bowel disorder","type":"exact"},{"name":"inflammatory bowel disease","type":"exact"}],"termid":"MONDO:0005265","terms_by_termid":{"MONDO:0012610":null,"MONDO:0012831":null},"xrefs":{"Monarch":{"xref_id":"0005265"}}}


id: PBO:0001243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit Orp3 (predicted)","termid":"PBO:0001243"}


id: PBO:0004145
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed during nucleotide depletion","termid":"PBO:0004145"}


id: PBO:0116198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylhomocysteinase, Sah1","termid":"PBO:0116198"}


id: MONDO:0016835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"14q11.2 microduplication syndrome is a rare chromosomal anomaly characterized by developmental delay, mild to severe intellectual disability with speech impairment and epilepsy. Additionally, it may include dysmorphic features (such as hypo- or hypertelorism, dysplastic ears, short palpebral fissures), microcephaly or macrocephaly, behavioral abnormalities, stereotyped hand movements, ataxia, hypotonia, cleft palate.","definition_xrefs":["Orphanet:261229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 14","termid":"MONDO:0016964"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"14q11.2 microduplication syndrome","secondary_identifiers":["MEDGEN:1657429","UMLS:C4749855","GARD:20773"],"synonyms":[{"name":"dup(14)(q11.2)","type":"exact"},{"name":"trisomy 14q11.2","type":"exact"}],"termid":"MONDO:0016835","xrefs":{"Monarch":{"xref_id":"0016835"}}}


id: GO:0047764
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + caldesmon = ADP + caldesmon phosphate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete caldesmon kinase activity (obsolete GO:0047764)","termid":"GO:0047764"}


id: PBO:0086630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; mRNA is enriched in Scp160p-associated mRNPs; YIL161W is a non-essential gene","termid":"PBO:0086630"}


id: PBO:0016526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine synthase-like protein Cys12","termid":"PBO:0016526"}


id: PBO:0040122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 9","termid":"PBO:0040122"}


id: MONDO:0020761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of squamous cell carcinoma in situ. It is a distinct clinicopathological entity and arises from the skin or the mucocutaneous junction. It affects predominantly white males in their 6-8th decades of life. Exposed and non-exposed skin sites are equally affected. UV damage and ingestion of inorganic arsenic may play a role in the development of the disease. On the skin surface, it presents as a single or multiple erythematous, scaly, keratotic patches or plaques. The clinical entity of erythroplasia of Queyrat is regarded as Bowen disease of the penis and it presents as an asymptomatic, red, circumscribed plaque. Morphologically, Bowen disease is characterized by the presence of hyperkeratosis, parakeratosis, dyskeratosis, and acanthosis. The keratotic squamous cells are atypical and display hyperchromatism and abnormal mitotic figures. The dermoepidermal basement membrane is intact. Complete surgical removal of the lesion may be curative.","definition_xrefs":["NCIT:C62571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin squamous cell carcinoma in situ","termid":"MONDO:0020760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"Bowen disease of the skin","secondary_identifiers":["MEDGEN:14207","ICDO:8081/2","NORD:868","UMLS:C0006079","MESH:D001913"],"synonyms":[{"name":"Bowen Disease","type":"exact"},{"name":"Bowen disease","type":"exact"},{"name":"Bowen disease of the skin","type":"exact"},{"name":"Bowen's disease of the skin","type":"exact"},{"name":"Bowens Disease","type":"exact"},{"name":"Disease, Bowen","type":"exact"},{"name":"Disease, Bowen's","type":"exact"},{"name":"intraepidermal squamous cell carcinoma, Bowen type","type":"exact"}],"termid":"MONDO:0020761","xrefs":{"Monarch":{"xref_id":"0020761"}}}


id: PBO:0041049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 7","termid":"PBO:0041049"}


id: SO:0000611
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pyrimidine rich sequence near the 3' end of an intron to which the 5'end becomes covalently bound during nuclear splicing. The resulting structure resembles a lariat.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal_intron_region","termid":"SO:0000841"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branch_site","synonyms":[{"name":"branch point","type":"exact"},{"name":"branch site","type":"exact"},{"name":"branch_point","type":"exact"}],"termid":"SO:0000611"}


id: GO:0075188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of symbiont hyphopodium formation on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"hyphopodium formation","termid":"GO:0075187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hyphopodium formation","synonyms":[{"name":"regulation of hyphopodium formation on or near host","type":"exact"}],"termid":"GO:0075188"}


id: PR:P50526
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssp1 gene.","definition_xrefs":["UniProtKB:P50526","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ssp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC297.03","synonyms":[{"name":"Spom972h-ssp1","type":"exact"}],"termid":"PR:P50526"}


id: MONDO:0006659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Common occlusive arterial disease which is caused by atherosclerosis. It is characterized by lesions in the innermost layer (arterial intima) of arteries including the aorta and its branches to the extremities. Risk factors include smoking, hyperlipidemia, and hypertension.","definition_xrefs":["MESH:D001162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coronary atherosclerosis","termid":"MONDO:0021661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"arteriosclerosis obliterans","secondary_identifiers":["ICD9:440.8","MedDRA:10065418","SCTID:361133006","UMLS:C0003851","MEDGEN:13915","DOID:5160","EFO:1000820"],"synonyms":[{"name":"arteriosclerosis obliterans (disorder) [ambiguous]","type":"exact"}],"termid":"MONDO:0006659","xrefs":{"Monarch":{"xref_id":"0006659"}}}


id: PBO:0079492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain containing 12","termid":"PBO:0079492"}


id: PBO:0075636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 2F","termid":"PBO:0075636"}


id: GO:0052021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of ethylene in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of ethylene levels in host (obsolete GO:0052021)","synonyms":[{"name":"modulation by organism of ethylene levels in other organism involved in symbiotic interaction","type":"broad"}],"termid":"GO:0052021"}


id: MONDO:0013680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cognitive impairment with or without cerebellar ataxia","secondary_identifiers":["UMLS:C3280415","MEDGEN:482045","OMIM:614306"],"synonyms":[{"name":"CIAT","type":"related"},{"name":"cognitive impairment with or without cerebellar ataxia","type":"exact"}],"termid":"MONDO:0013680","xrefs":{"Monarch":{"xref_id":"0013680"}}}


id: MONDO:0009614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive form of methylmalonic aciduria, caused by mutation(s) in the MMAB gene, encoding cob(I)yrinic acid a,c-diamide adenosyltransferase, mitochondrial.","definition_xrefs":["NCIT:C142172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin B12-responsive methylmalonic acidemia","termid":"MONDO:0017214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"methylmalonic aciduria, cblB type","secondary_identifiers":["DOID:0060743","GARD:9479","UMLS:C1855102","MEDGEN:344420","Orphanet:79311","NANDO:1200796","OMIM:251110","NANDO:2201106"],"synonyms":[{"name":"methylmalonic acidemia cblB type","type":"exact"},{"name":"methylmalonic acidemia, cblB type","type":"exact"},{"name":"methylmalonic aciduria cblB type","type":"exact"},{"name":"methylmalonic aciduria, cblB type","type":"exact"},{"name":"methylmalonic aciduria, vitamin B12-responsive, cblB type","type":"exact"},{"name":"methylmalonic aciduria, vitamin B12-responsive, due to defect in synthesis of adenosylcobalamin, cblB complementation type","type":"exact"},{"name":"methylmalonic aciduria, vitamin B12-responsive, due to defect in synthesis of adenosylcobalamin, cblB type","type":"related"},{"name":"vitamin B12-responsive methylmalonic acidemia type cblB","type":"exact"},{"name":"vitamin B12-responsive methylmalonic aciduria, type cblB","type":"exact"}],"termid":"MONDO:0009614","xrefs":{"Monarch":{"xref_id":"0009614"}}}


id: FYPO:0001425
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of the initiation of mitotic DNA replication is abnormal, resulting in one or more rounds of rereplication of the entire genome.","definition_xrefs":["PMID:10388806","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"DNA content increased during vegetative growth","termid":"FYPO:0000158"},{"relation_name":"is_a","term_name":"abnormal negative regulation of mitotic DNA replication initiation","termid":"FYPO:0000216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication","synonyms":[{"name":"abnormal negative regulation of DNA replication initiation during vegetative growth, resulting in complete rereplication","type":"exact"},{"name":"abnormal negative regulation of DNA replication initiation resulting in complete rereplication during mitotic cell cycle","type":"related"},{"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete re-replication","type":"exact"},{"name":"complete mitotic DNA re-replication","type":"related"},{"name":"complete mitotic DNA rereplication","type":"related"},{"name":"endoreduplication","type":"related"},{"name":"endoreplication","type":"related"},{"name":"increased spontaneous diploidization","type":"related"}],"termid":"FYPO:0001425"}


id: GO:0150004
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of the dendritic spine neck where the spine arises from the dendritic shaft.","definition_xrefs":["GOC:bc","PMID:9030614","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"dendritic spine neck","termid":"GO:0044326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic spine origin","termid":"GO:0150004"}


id: PBO:0060199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MUC20 overlapping transcript","termid":"PBO:0060199"}


id: PBO:0047175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 8","termid":"PBO:0047175"}


id: PBO:0064033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 67","termid":"PBO:0064033"}


id: PBO:0050985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 57","termid":"PBO:0050985"}


id: GO:0031321
data:
  {"annotated_genes":["SJAG_00971","SJAG_04922","SJAG_04781","SJAG_02320","SJAG_03746","SJAG_04275","SJAG_04080","SJAG_02736","SJAG_03688","SJAG_00486","SJAG_05309","SJAG_01769","SJAG_00826","SJAG_04901","SJAG_01483","SJAG_04271","SJAG_04615","SJAG_02529","SJAG_04470","SJAG_00821","SJAG_04483","SJAG_03536","SJAG_03915","SJAG_02248","SJAG_02241","SJAG_00405","SJAG_03250","SJAG_04010","SJAG_00114","SJAG_00663"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90984,97079,104465,108791,109606],"is_not":false,"summary":null,"term":"GO:0031321"},{"annotations":[118332,90774,109607,98329,94855,104781,116422,97080,118031,99333,101208,97041,99402,113423,99332,118513,106874],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032120"},{"annotations":[107207,91777,99335,96359,113424,99334,103630,106320,97042,102419],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[93990,99336,99337,105501,99614,115468],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"During ascospore formation, the process in which each haploid nucleus becomes encapsulated by a double membrane.","definition_xrefs":["GOC:mah","PMID:14702385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"ascospore formation","termid":"GO:0030437"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00405":null,"SJAG_00486":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_01483":null,"SJAG_01769":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02529":null,"SJAG_02736":null,"SJAG_03250":null,"SJAG_03536":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04271":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04901":null,"SJAG_04922":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030437"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0007049","GO:0030437"],"is_obsolete":false,"name":"ascospore-type prospore assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ascospore-type prospore formation","type":"exact"},{"name":"forespore formation","type":"related"}],"termid":"GO:0031321","terms_by_termid":{"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0070583":null}}


id: PBO:0005447
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sty1 Regulated Kinase","termid":"PBO:0005447"}


id: MOD:00283
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to an N6-propylamino-poly(propylmethylamino)-propyldimethylamine-L-lysine.","definition_xrefs":["RESID:AA0278","PubMed:10550045","PubMed:11349130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-propylamino-poly(propylmethylamino)-propyldimethylamine-L-lysine","synonyms":[{"name":"(alpha)- ([([(5S)-5-amino-5-carboxypentyl]amino)propyl][(methyl)amino])-(omega)-methyl poly[propane-1,3-diyl(methylimino)]","type":"exact"},{"name":"MOD_RES N6-poly(methylaminopropyl)lysine","type":"exact"},{"name":"N6-[3-([(omega)-(dimethyl)aminopropyl-poly(3-[methylamino]propyl)]amino)propyl]lysine","type":"exact"},{"name":"N6-propylamino-poly(propylmethylamino)-propyldimethylamine-L-lysine","type":"exact"},{"name":"lysine derivative Lys(x)","type":"exact"},{"name":"silaffin polycationic lysine derivative","type":"exact"}],"termid":"MOD:00283"}


id: PBO:0074482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET and MYND domain containing 1","termid":"PBO:0074482"}


id: MONDO:0011701
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 14q11-q12.","definition_xrefs":["DOID:0110903","PMID:10747815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory bowel disease 4","secondary_identifiers":["MEDGEN:339822","OMIM:606675","UMLS:C1847691","MESH:C564680"],"synonyms":[{"name":"IBD4","type":"exact"},{"name":"inflammatory bowel disease 4","type":"exact"},{"name":"inflammatory bowel disease type 4","type":"exact"}],"termid":"MONDO:0011701","xrefs":{"Monarch":{"xref_id":"0011701"}}}


id: MONDO:0013441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An asphyxiating thoracic dystrophy has material basis in compound heterozygous mutation in the TTC21B gene on chromosome 2q24.","definition_xrefs":["DOID:0110088","PMID:21258341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Jeune syndrome","termid":"MONDO:0018770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"asphyxiating thoracic dystrophy 4","secondary_identifiers":["GARD:15718","UMLS:C3151185","OMIM:613819","MEDGEN:462535"],"synonyms":[{"name":"ATD4","type":"exact"},{"name":"SRTD4","type":"exact"},{"name":"asphyxiating thoracic dystrophy 4","type":"exact"},{"name":"asphyxiating thoracic dystrophy type 4","type":"exact"},{"name":"short-rib thoracic dysplasia 4 with or without polydactyly","type":"exact"}],"termid":"MONDO:0013441","xrefs":{"Monarch":{"xref_id":"0013441"}}}


id: MONDO:0021664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cervical aortic arch (obsolete MONDO:0021664)","termid":"MONDO:0021664","xrefs":{"Monarch":{"xref_id":"0021664"}}}


id: PBO:0077165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLE family member 6, subcortical maternal complex member","termid":"PBO:0077165"}


id: PBO:0039236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-aminolevulinate synthase 1","termid":"PBO:0039236"}


id: MONDO:1010905
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deficiency of uridine monophosphate synthase that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deficiency of uridine monophosphate synthase, non-human animal","termid":"MONDO:1010191"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deficiency of uridine monophosphate synthase, cattle","secondary_identifiers":["OMIA:000262-9913"],"termid":"MONDO:1010905","xrefs":{"Monarch":{"xref_id":"1010905"}}}


id: PR:Q09681
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gmh2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase gmh2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5H10.13c","synonyms":[{"name":"Spom972h-gmh2","type":"exact"}],"termid":"PR:Q09681"}


id: PBO:0074514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A6","termid":"PBO:0074514"}


id: PBO:0057615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1181","termid":"PBO:0057615"}


id: PBO:0090093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructo-2-kinase/fructose-2,6-bisphosphate 2-phosphatase","termid":"PBO:0090093"}


id: GO:0047416
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N-acetylarylalkylamine = acetate + arylalkylamine.","definition_xrefs":["MetaCyc:3.5.1.76-RXN","EC:3.5.1.76"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"arylalkyl acylamidase activity","secondary_identifiers":["RHEA:10352"],"synonyms":[{"name":"N-acetylarylalkylamine amidohydrolase activity","type":"related"},{"name":"aralkyl acylamidase activity","type":"related"}],"termid":"GO:0047416"}


id: PBO:0004267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp9","termid":"PBO:0004267"}


id: MONDO:0006177
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cutaneous undifferentiated pleomorphic sarcoma (obsolete MONDO:0006177)","termid":"MONDO:0006177","xrefs":{"Monarch":{"xref_id":"0006177"}}}


id: _global:occupancy
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"A number representing what proportion of copies of the protein have the modification.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occupancy","termid":"_global:occupancy"}


id: GO:0042866
data:
  {"annotated_genes":["SJAG_02796"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97768],"is_not":false,"summary":null,"term":"GO:0042866"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyruvate, 2-oxopropanoate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate metabolic process","termid":"GO:0006090"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02796":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyruvate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyruvate anabolism","type":"exact"},{"name":"pyruvate biosynthesis","type":"exact"},{"name":"pyruvate formation","type":"exact"},{"name":"pyruvate synthesis","type":"exact"}],"termid":"GO:0042866","terms_by_termid":{"GO:0042866":null}}


id: PBO:0086008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; subunit of the leading edge protein (LEP) complex (Ssp1-Ady3-Don1-Irc10) that forms a ring-like structure at the leading edge of the prospore membrane during meiosis II; null mutant displays increased levels of spontaneous Rad52p foci","termid":"PBO:0086008"}


id: PBO:0082844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII vesicle coat protein required for ER transport vesicle budding; essential factor in endoplasmic reticulum exit site (ERES) formation, as well as in COPII-mediated ER-to-Golgi traffic; bound to periphery of ER membranes and may act to stabilize initial COPII complexes; interacts with Sec23p, Sec24p and Sec31p","termid":"PBO:0082844"}


id: FYPO:0003594
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of ubiquitin-dependent protein degradation with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein degradation during vegetative growth","termid":"FYPO:0002800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal anaphase-promoting complex-dependent protein catabolic process","synonyms":[{"name":"normal anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"normal anaphase-promoting complex-dependent protein catabolic process during mitotic cell cycle","type":"related"},{"name":"normal anaphase-promoting complex-dependent protein catabolic process during vegetative growth","type":"exact"},{"name":"normal anaphase-promoting complex-dependent protein degradation","type":"exact"}],"termid":"FYPO:0003594"}


id: PBO:0053459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 412","termid":"PBO:0053459"}


id: GO:1900627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of arugosin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of arugosin biosynthetic process","termid":"GO:1900626"},{"relation_name":"negatively_regulates","term_name":"arugosin biosynthetic process","termid":"GO:1900587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of arugosin biosynthetic process","synonyms":[{"name":"down regulation of arugosin anabolism","type":"exact"},{"name":"down regulation of arugosin biosynthesis","type":"exact"},{"name":"down regulation of arugosin biosynthetic process","type":"exact"},{"name":"down regulation of arugosin formation","type":"exact"},{"name":"down regulation of arugosin synthesis","type":"exact"},{"name":"down-regulation of arugosin anabolism","type":"exact"},{"name":"down-regulation of arugosin biosynthesis","type":"exact"},{"name":"down-regulation of arugosin biosynthetic process","type":"exact"},{"name":"down-regulation of arugosin formation","type":"exact"},{"name":"down-regulation of arugosin synthesis","type":"exact"},{"name":"downregulation of arugosin anabolism","type":"exact"},{"name":"downregulation of arugosin biosynthesis","type":"exact"},{"name":"downregulation of arugosin biosynthetic process","type":"exact"},{"name":"downregulation of arugosin formation","type":"exact"},{"name":"downregulation of arugosin synthesis","type":"exact"},{"name":"inhibition of arugosin anabolism","type":"exact"},{"name":"inhibition of arugosin biosynthesis","type":"exact"},{"name":"inhibition of arugosin biosynthetic process","type":"narrow"},{"name":"inhibition of arugosin formation","type":"exact"},{"name":"inhibition of arugosin synthesis","type":"exact"},{"name":"negative regulation of arugosin anabolism","type":"exact"},{"name":"negative regulation of arugosin biosynthesis","type":"exact"},{"name":"negative regulation of arugosin formation","type":"exact"},{"name":"negative regulation of arugosin synthesis","type":"exact"}],"termid":"GO:1900627"}


id: MONDO:0018890
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lyell syndrome is an extended form of toxic epidermal necrolysis characterized by destruction and detachment of the skin epithelium and mucous membranes involving more than 30% of the body surface area.","definition_xrefs":["Orphanet:537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxic epidermal necrolysis","termid":"MONDO:0019810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Lyell syndrome","secondary_identifiers":["GARD:18696"],"termid":"MONDO:0018890","xrefs":{"Monarch":{"xref_id":"0018890"}}}


id: GO:0099073
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A vesicle derived via budding from a mitochondrion. These vesicles often contain inner membrane and, much more rarely, cristae.","definition_xrefs":["PMID:18207745","PMID:20619655","PMID:22226745","PMID:23300790","GOC:bc","GOC:pad","GOC:PARL-UCL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"mitochondrion-derived vesicle","synonyms":[{"name":"MDV","type":"exact"}],"termid":"GO:0099073"}


id: PBO:0026674
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0026674"}


id: PBO:0061360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 20","termid":"PBO:0061360"}


id: FYPO:0000403
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the duration of progression through the G2/M transition of the mitotic cell cycle is increased.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased duration of mitotic G2/M phase transition (obsolete FYPO:0000403)","synonyms":[{"name":"cell cycle progression through the G2/M phase transition: increased duration","type":"related"},{"name":"increased duration of cell cycle progression through mitotic G2/M phase transition","type":"exact"},{"name":"increased duration of mitotic G2/M phase transition during vegetative growth","type":"exact"}],"termid":"FYPO:0000403"}


id: PBO:0059976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 21","termid":"PBO:0059976"}


id: PBO:0041757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAP1 pseudogene 2","termid":"PBO:0041757"}


id: PBO:0059611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 23","termid":"PBO:0059611"}


id: GO:0032260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a jasmonic acid stimulus received in the context of the jasmonic acid- and ethylene (ethene)-dependent process that confers broad spectrum systemic resistance to disease in response to wounding or a pathogen.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to jasmonic acid","termid":"GO:0009753"},{"relation_name":"part_of","term_name":"jasmonic acid and ethylene-dependent systemic resistance","termid":"GO:0009861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance","synonyms":[{"name":"response to jasmonic acid stimulus during jasmonic acid and ethylene-dependent systemic resistance","type":"related"}],"termid":"GO:0032260"}


id: GO:0019635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2-aminoethylphosphonate, also known as ciliatine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-aminoethylphosphonate metabolic process","termid":"GO:0046433"},{"relation_name":"is_a","term_name":"primary amino compound catabolic process","termid":"GO:1901161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2-aminoethylphosphonate catabolic process","secondary_identifiers":["MetaCyc:PHOSPHONOTASE-PWY"],"synonyms":[{"name":"2-aminoethylphosphonate breakdown","type":"exact"},{"name":"2-aminoethylphosphonate catabolism","type":"exact"},{"name":"2-aminoethylphosphonate degradation","type":"exact"},{"name":"2-phosphonoethylamine catabolic process","type":"exact"},{"name":"2-phosphonoethylamine catabolism","type":"exact"},{"name":"ciliatine catabolic process","type":"exact"},{"name":"ciliatine catabolism","type":"exact"}],"termid":"GO:0019635"}


id: PBO:0062072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 3 pseudogene","termid":"PBO:0062072"}


id: PBO:0031636
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_gene_silencing","termid":"PBO:0031636"}


id: GO:1990695
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the Golgi trans cisterna membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:bhm","PMID:24119662","PMID:16038056"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of Golgi trans cisterna membrane (obsolete GO:1990695)","synonyms":[{"name":"intrinsic component of trans-Golgi cisterna membrane","type":"exact"}],"termid":"GO:1990695"}


id: GO:0048380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of lateral mesoderm cell fate specification.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mesodermal cell fate specification","termid":"GO:0042662"},{"relation_name":"is_a","term_name":"regulation of lateral mesodermal cell fate specification","termid":"GO:0048378"},{"relation_name":"negatively_regulates","term_name":"lateral mesodermal cell fate specification","termid":"GO:0048377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lateral mesodermal cell fate specification","synonyms":[{"name":"down regulation of lateral mesodermal cell fate specification","type":"exact"},{"name":"down-regulation of lateral mesodermal cell fate specification","type":"exact"},{"name":"downregulation of lateral mesodermal cell fate specification","type":"exact"},{"name":"inhibition of lateral mesodermal cell fate specification","type":"narrow"},{"name":"negative regulation of lateral plate mesodermal cell fate specification","type":"exact"}],"termid":"GO:0048380"}


id: PBO:0017881
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"itsy bitsy phosphatase","termid":"PBO:0017881"}


id: MONDO:0002519
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects the anal canal or anal margin. Representative examples of non-neoplastic disorders include hemorrhoids and anal ulcer. Representative examples of neoplastic disorders include carcinoma, lymphoma, and melanoma.","definition_xrefs":["NCIT:C26695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectal disorder","termid":"MONDO:0001593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"anus disorder","secondary_identifiers":["MEDGEN:359","DOID:3128","UMLS:C0003462","MESH:D001004","EFO:0009660","SCTID:32110003"],"synonyms":[{"name":"Ulcer of anus","type":"related"},{"name":"anal disease","type":"exact"},{"name":"anal disorder","type":"exact"},{"name":"anal fissure","type":"related"},{"name":"anal fissure and fistula","type":"related"},{"name":"anal ulcer","type":"related"},{"name":"anus disease","type":"exact"},{"name":"anus disease or disorder","type":"exact"},{"name":"disease of anus","type":"exact"},{"name":"disease or disorder of anus","type":"exact"},{"name":"disorder of anal region","type":"exact"},{"name":"disorder of anus","type":"exact"},{"name":"fissure in ano","type":"related"},{"name":"nontraumatic tear of anus","type":"related"},{"name":"solitary anal ulcer","type":"related"}],"termid":"MONDO:0002519","xrefs":{"Monarch":{"xref_id":"0002519"}}}


id: PBO:0074111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 29 member 3","termid":"PBO:0074111"}


id: GO:0072538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response which is associated with resistance to intracellular bacteria with a key role in inflammation and tissue injury. This immune response is associated with pathological autoimmune conditions such as multiple sclerosis, arthritis and psoriasis which is typically orchestrated by the production of particular cytokines by T-helper 17 cells, most notably interleukin-17, IL-21 and IL-22.","definition_xrefs":["GOC:BHF","GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 17 type immune response","synonyms":[{"name":"Th17 immune response","type":"exact"}],"termid":"GO:0072538"}


id: PBO:0031492
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_actomyosin_contractile_ring_assembly","termid":"PBO:0031492"}


id: GO:0051322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase, following metaphase, during which the chromosomes separate and migrate towards the poles of the spindle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase","termid":"GO:0022403"},{"relation_name":"part_of","term_name":"M phase","termid":"GO:0000279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaphase","secondary_identifiers":["Wikipedia:Anaphase"],"termid":"GO:0051322"}


id: GO:0015894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of acriflavine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Acriflavine is a fluorescent dye used as a local antiseptic and also as a biological stain. It intercalates into nucleic acids thereby inhibiting bacterial and viral replication.","definition_xrefs":["GOC:curators","PubChem_Compound:6842"],"gene_count":0,"genotype_count":0,"name":"obsolete acriflavine transport (obsolete GO:0015894)","synonyms":[{"name":"acriflavin transport","type":"related"}],"termid":"GO:0015894"}


id: PBO:0017972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMPACT domain protein, possible chaperone, regulation of cytoplasmic translation in response to stress (predicted)","termid":"PBO:0017972"}


id: GO:0051291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers that are not all identical. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein complex oligomerization","termid":"GO:0051259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"protein heterooligomerization","synonyms":[{"name":"protein heterooligomer assembly","type":"exact"},{"name":"protein heterooligomer biosynthesis","type":"exact"},{"name":"protein heterooligomer biosynthetic process","type":"exact"},{"name":"protein heterooligomer formation","type":"exact"}],"termid":"GO:0051291"}


id: GO:0014701
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of the sarcoplasmic reticulum membrane that contains calcium release channels, is devoted to calcium release and is juxtaposed to transverse tubule membrane. The junctional sarcoplasmic reticulum membrane consists of the junctional region of the terminal cisterna membrane.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoplasmic reticulum membrane","termid":"GO:0033017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005789","GO:0005737","GO:0005783"],"is_obsolete":false,"name":"junctional sarcoplasmic reticulum membrane","termid":"GO:0014701"}


id: PBO:0028245
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_DNA_damage_checkpoint_during_cellular_response_to_UV","termid":"PBO:0028245"}


id: GO:0071521
data:
  {"annotated_genes":["SJAG_00514","SJAG_04509","SJAG_00596","SJAG_03453","SJAG_01794","SJAG_00845"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87349,89326,90315,92950,103190,104025],"is_not":false,"summary":null,"term":"GO:0071521"}]},"cv_name":"cellular_component","definition":"A protein complex formed by the association of the small GTPase Cdc42 with additional proteins. In Schizosaccharomyces the complex contains the Cdc42, Ras1, Scd1, Scd2, andShk1 proteins, and functions in the Ras1-Scd GTPase signaling pathway.","definition_xrefs":["PMID:7923372","PMID:8943016","GOC:vw","GOC:mah","PMID:10567532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"GTPase complex","termid":"GO:1905360"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_00596":null,"SJAG_00845":null,"SJAG_01794":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Cdc42 GTPase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Ras1-Scd1-Scd2-Cdc42-Shk1 complex","type":"exact"}],"termid":"GO:0071521","terms_by_termid":{"GO:0071521":null}}


id: PBO:0002526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-B box","termid":"PBO:0002526"}


id: PBO:0056931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermediate peptidase pseudogene 3","termid":"PBO:0056931"}


id: GO:0071355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-9 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interleukin-9","termid":"GO:0071104"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-9","synonyms":[{"name":"cellular response to IL-9","type":"exact"}],"termid":"GO:0071355"}


id: GO:0046474
data:
  {"annotated_genes":["SJAG_02980","SJAG_01416","SJAG_01860","SJAG_03878","SJAG_01233","SJAG_02613","SJAG_03672","SJAG_04930","SJAG_03292","SJAG_00846","SJAG_04924","SJAG_01519","SJAG_04628","SJAG_03154","SJAG_03131","SJAG_02776","SJAG_01918","SJAG_03066","SJAG_04792","SJAG_02523","SJAG_00063","SJAG_03700","SJAG_01570","SJAG_04119","SJAG_00426","SJAG_06425","SJAG_00825","SJAG_00999","SJAG_04881","SJAG_02804","SJAG_05327","SJAG_01957","SJAG_00053","SJAG_02321","SJAG_05330","SJAG_04545","SJAG_04337","SJAG_02902","SJAG_02913","SJAG_00812","SJAG_00168","SJAG_05278","SJAG_01236","SJAG_00296","SJAG_01227","SJAG_01876","SJAG_01148","SJAG_04883","SJAG_03563","SJAG_04165","SJAG_00831","SJAG_00946","SJAG_02289","SJAG_04317","SJAG_00068","SJAG_01571","SJAG_03115","SJAG_03506","SJAG_03801","SJAG_00114","SJAG_02488","SJAG_01036","SJAG_03170","SJAG_03524","SJAG_02328","SJAG_06383","SJAG_04323","SJAG_00295","SJAG_04537","SJAG_04975","SJAG_04319","SJAG_01863"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70954],"is_not":false,"summary":null,"term":"GO:0046474"},{"annotations":[91326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902635"},{"annotations":[92521,105698,117350,112510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032049"},{"annotations":[61093,108774,111478,88279,115252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006657"},{"annotations":[105699,119069,112511,102504,114172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016024"},{"annotations":[88128,101104,92476,109421,99789,111091,114708,98370,89029,92566,113434,103274,107037,93998,115632,91712,102541,86915,93013,97596,88402,99723,116732,111847,90708,114282,90881,98161,103212,108072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[103879,89890],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902647"},{"annotations":[99247,92538,93516,95416,109409,90660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006654"},{"annotations":[108775,106883,95901,94136,92539,103839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006656"},{"annotations":[94137,117961,88280,88861,95902,103840,103479,114175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006646"},{"annotations":[91633,92112,116501,106783,118320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006661"},{"annotations":[110621,110748,92703,117962,91328,90702,96187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046854"},{"annotations":[61377,62801,61268,97085,110657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036092"},{"annotations":[114176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006659"},{"annotations":[117031],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902648"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycerophospholipids, any derivative of glycerophosphate that contains at least one O-acyl, O-alkyl, or O-alkenyl group attached to the glycerol residue.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid metabolic process","termid":"GO:0006650"},{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"glycerolipid biosynthetic process","termid":"GO:0045017"}],"gene_count":72,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00063":null,"SJAG_00068":null,"SJAG_00114":null,"SJAG_00168":null,"SJAG_00295":null,"SJAG_00296":null,"SJAG_00426":null,"SJAG_00812":null,"SJAG_00825":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_00946":null,"SJAG_00999":null,"SJAG_01036":null,"SJAG_01148":null,"SJAG_01227":null,"SJAG_01233":null,"SJAG_01236":null,"SJAG_01416":null,"SJAG_01519":null,"SJAG_01570":null,"SJAG_01571":null,"SJAG_01860":null,"SJAG_01863":null,"SJAG_01876":null,"SJAG_01918":null,"SJAG_01957":null,"SJAG_02289":null,"SJAG_02321":null,"SJAG_02328":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02613":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02902":null,"SJAG_02913":null,"SJAG_02980":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03131":null,"SJAG_03154":null,"SJAG_03170":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03524":null,"SJAG_03563":null,"SJAG_03672":null,"SJAG_03700":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04317":null,"SJAG_04319":null,"SJAG_04323":null,"SJAG_04337":null,"SJAG_04537":null,"SJAG_04545":null,"SJAG_04628":null,"SJAG_04792":null,"SJAG_04881":null,"SJAG_04883":null,"SJAG_04924":null,"SJAG_04930":null,"SJAG_04975":null,"SJAG_05278":null,"SJAG_05327":null,"SJAG_05330":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"glycerophospholipid biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:25318672":null},"secondary_identifiers":["Reactome:R-HSA-1483206"],"synonyms":[{"name":"glycerophospholipid anabolism","type":"exact"},{"name":"glycerophospholipid biosynthesis","type":"exact"},{"name":"glycerophospholipid formation","type":"exact"},{"name":"glycerophospholipid synthesis","type":"exact"},{"name":"phosphoglyceride biosynthesis","type":"exact"},{"name":"phosphoglyceride biosynthetic process","type":"exact"}],"termid":"GO:0046474","terms_by_termid":{"GO:0006506":null,"GO:0006646":null,"GO:0006654":null,"GO:0006656":null,"GO:0006657":null,"GO:0006659":null,"GO:0006661":null,"GO:0016024":null,"GO:0032049":null,"GO:0036092":null,"GO:0046474":null,"GO:0046854":null,"GO:1902635":null,"GO:1902647":null,"GO:1902648":null}}


id: RO:0000052
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between a specifically dependent continuant (the dependent) and an independent continuant (the bearer), in which the dependent specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"inheres_in_part_of","termid":"RO:0002314"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inheres_in","termid":"RO:0000052"}


id: GO:0045835
data:
  {"annotated_genes":["SJAG_03327","SJAG_01680","SJAG_03438","SJAG_04287","SJAG_00266","SJAG_01330","SJAG_01082","SJAG_00364","SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105807,113993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[88536,115557,113753,106105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[107460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[113280],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[100834],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of meiosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of meiotic nuclear division","termid":"GO:0040020"},{"relation_name":"is_a","term_name":"negative regulation of meiotic cell cycle","termid":"GO:0051447"},{"relation_name":"is_a","term_name":"negative regulation of nuclear division","termid":"GO:0051784"},{"relation_name":"negatively_regulates","term_name":"meiotic nuclear division","termid":"GO:0140013"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00364":null,"SJAG_01082":null,"SJAG_01330":null,"SJAG_01680":null,"SJAG_03327":null,"SJAG_03438":null,"SJAG_04259":null,"SJAG_04287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"negative regulation of meiotic nuclear division","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of meiosis","type":"exact"},{"name":"down-regulation of meiosis","type":"exact"},{"name":"downregulation of meiosis","type":"exact"},{"name":"inhibition of meiosis","type":"narrow"},{"name":"negative regulation of meiosis","type":"exact"}],"termid":"GO:0045835","terms_by_termid":{"GO:0045128":null,"GO:0051598":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: GO:0016119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving carotenes, hydrocarbon carotenoids.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene metabolic process","termid":"GO:0042214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"carotene metabolic process","synonyms":[{"name":"carotene metabolism","type":"exact"}],"termid":"GO:0016119"}


id: GO:0000494
data:
  {"annotated_genes":["SJAG_02350","SJAG_00943"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107579,109691],"is_not":false,"summary":null,"term":"GO:0000494"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of a box C/D RNA molecule.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sno(s)RNA 3'-end processing","termid":"GO:0031126"},{"relation_name":"is_a","term_name":"box C/D sno(s)RNA processing","termid":"GO:0034963"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00943":null,"SJAG_02350":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016074"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0016074","GO:0008150"],"is_obsolete":false,"name":"box C/D sno(s)RNA 3'-end processing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"box C/D RNA 3' end processing","type":"exact"},{"name":"box C/D sRNA 3'-end processing","type":"narrow"},{"name":"box C/D snoRNA 3'-end processing","type":"narrow"}],"termid":"GO:0000494","terms_by_termid":{"GO:0000494":null}}


id: PBO:0083820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of the COMPASS (Set1C) complex; COMPASS methylates histone H3 on lysine 4 and is required in transcriptional silencing near telomeres; WD40 beta propeller superfamily member and ortholog of mammalian WDR5","termid":"PBO:0083820"}


id: PBO:0089347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase Alg8","termid":"PBO:0089347"}


id: MONDO:0004519
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare hemangioma arising from synovium lining surfaces.","definition_xrefs":["NCIT:C6525"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"deep hemangioma","termid":"MONDO:0003096"},{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"},{"relation_name":"is_a","term_name":"benign synovial neoplasm","termid":"MONDO:0024715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synovial angioma","secondary_identifiers":["DOID:8274","MEDGEN:234375","UMLS:C1336546"],"synonyms":[{"name":"angioma of synovium","type":"exact"},{"name":"angioma of the synovium","type":"exact"},{"name":"hemangioma of layer of synovial tissue","type":"exact"},{"name":"hemangioma of synovium","type":"exact"},{"name":"hemangioma of the synovium","type":"exact"},{"name":"layer of synovial tissue hemangioma","type":"exact"},{"name":"synovial hemangioma","type":"exact"}],"termid":"MONDO:0004519","xrefs":{"Monarch":{"xref_id":"0004519"}}}


id: PBO:0059794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 20","termid":"PBO:0059794"}


id: PBO:0076094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 1A","termid":"PBO:0076094"}


id: MONDO:0011321
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expansile bone lesions","secondary_identifiers":["MESH:C566375","OMIM:603439","MEDGEN:350991","UMLS:C1863880"],"synonyms":[{"name":"expansile bone lesions","type":"exact"}],"termid":"MONDO:0011321","xrefs":{"Monarch":{"xref_id":"0011321"}}}


id: PBO:0027836
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_septum_disassembly","termid":"PBO:0027836"}


id: GO:0070431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a ligand (such as a bacterial peptidoglycan) to a cytoplasmic nucleotide-binding oligomerization domain containing 2 (NOD2) protein receptor, and ending with regulation of a downstream cellular process.","definition_xrefs":["GOC:add","PMID:18585455","PMID:17944960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0035872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"nucleotide-binding oligomerization domain containing 2 signaling pathway","synonyms":[{"name":"NOD2 signaling pathway","type":"exact"},{"name":"nucleotide-binding oligomerization domain containing 2 signalling pathway","type":"exact"}],"termid":"GO:0070431"}


id: MONDO:0002634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare malignant adipose tissue neoplasm that arises from the bone.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"osteosarcoma","termid":"MONDO:0009807"},{"relation_name":"is_a","term_name":"liposarcoma","termid":"MONDO:0005060"},{"relation_name":"is_a","term_name":"bone sarcoma","termid":"MONDO:0021054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"liposarcoma of bone","secondary_identifiers":["MEDGEN:231450","NCIT:C7598","DOID:3381","UMLS:C1332581"],"synonyms":[{"name":"bone liposarcoma","type":"exact"},{"name":"bone tissue liposarcoma","type":"exact"},{"name":"liposarcoma of bone","type":"exact"},{"name":"liposarcoma of bone tissue","type":"exact"},{"name":"liposarcoma of the bone","type":"exact"}],"termid":"MONDO:0002634","xrefs":{"Monarch":{"xref_id":"0002634"}}}


id: PBO:0002484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Usp108","termid":"PBO:0002484"}


id: PR:O74462
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription initiation factor TFIID subunit 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10221:SF7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.18c","secondary_identifiers":["UniProtKB:O74462"],"synonyms":[{"name":"SPCC16C4.18c","type":"related"},{"name":"Spom972h-TAF6","type":"exact"},{"name":"TAFII-50 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"TAFII50 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"TBP-associated factor 50 kDa (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"TBP-associated factor 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"taf50","type":"related"}],"termid":"PR:O74462"}


id: PBO:0038351
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_positive_regulatory_component_activity","termid":"PBO:0038351"}


id: PBO:0060107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 8","termid":"PBO:0060107"}


id: PBO:0085131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein involved in the asymmetric localization of ASH1 mRNA; binds cooperatively with She2p to the E3 zip-code element in the 3'-UTR of the mRNA; constituent of 66S pre-ribosomal particles involved in pre-rRNA processing and nuclear export of the 60S subunit; may facilitate Rpl43p loading; required post-transcriptionally for efficient retrotransposition; absence results in decreased Ty1 Gag:GFP protein levels; relocalizes from nucleus to cytoplasm upon DNA replication stress","termid":"PBO:0085131"}


id: PBO:0074383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG6 nonsense mediated mRNA decay factor","termid":"PBO:0074383"}


id: PBO:0033828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotin-protein ligase Bpl1 (predicted)","termid":"PBO:0033828"}


id: FYPO:0006716
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A mitosis phenotype observed in the vegetative growth phase of the life cycle in which chromosomes segregate equally (i.e. normally), but the nuclear envelope is not distributed equally between daughter nuclei. As a result, the nucleus divides unequally to produce one daughter nucleus that is larger than the other.","definition_xrefs":["PomBase:jh","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large and small daughter nuclei","termid":"FYPO:0006715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002403","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"large and small daughter nuclei, with unequal nuclear envelope distribution","synonyms":[{"name":"large and small daughter nuclei, with unequal nuclear envelope and equal mitotic sister chromatid segregation","type":"exact"},{"name":"large and small daughter nuclei, with unequal nuclear envelope distribution, during mitotic cell cycle","type":"related"},{"name":"large and small daughter nuclei, with unequal nuclear envelope distribution, during vegetative growth","type":"exact"},{"name":"large and small daughter nuclei, with unequal nuclear envelope partitioning","type":"exact"}],"termid":"FYPO:0006716"}


id: MONDO:0001801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"scleral disorder","termid":"MONDO:0001269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"staphyloma posticum","secondary_identifiers":["MEDGEN:509934","UMLS:C0155360","icd11.foundation:382453603","SCTID:87819007","DOID:13789","ICD9:379.12"],"termid":"MONDO:0001801","xrefs":{"Monarch":{"xref_id":"0001801"}}}


id: GO:1905119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a haloperidol stimulus.","definition_xrefs":["GOC:dw","PMID:24751813","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to haloperidol","termid":"GO:1905119"}


id: PBO:0001827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein Rgg8 (predicted)","termid":"PBO:0001827"}


id: GO:0002349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of histamine following a stimulus as part of an inflammatory response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["PMID:16730260","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator involved in inflammatory response","termid":"GO:0002532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"histamine production involved in inflammatory response","synonyms":[{"name":"histamine production involved in acute inflammatory response","type":"broad"}],"termid":"GO:0002349"}


id: PBO:0001511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human TMEM165 homolog","termid":"PBO:0001511"}


id: PBO:0051824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IRF2 divergent transcript","termid":"PBO:0051824"}


id: MONDO:0012857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disseminated superficial actinic porokeratosis","termid":"MONDO:0019212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"porokeratosis 5, disseminated superficial actinic type","secondary_identifiers":["MEDGEN:382935","UMLS:C2676769","OMIM:612293","GARD:15551","MESH:C567356"],"synonyms":[{"name":"POROK5","type":"exact"},{"name":"porokeratosis 5, disseminated superficial actinic","type":"exact"},{"name":"porokeratosis 5, disseminated superficial actinic type","type":"exact"},{"name":"porokeratosis, disseminated superficial actinic, 3","type":"related"}],"termid":"MONDO:0012857","xrefs":{"Monarch":{"xref_id":"0012857"}}}


id: GO:0006496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The glycosylation of a nitrogen atom of a free alpha amino terminal of a peptide.","definition_xrefs":["GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete protein amino acid terminal N-glycosylation (obsolete GO:0006496)","synonyms":[{"name":"protein amino acid terminal N-glycosylation","type":"exact"}],"termid":"GO:0006496"}


id: PR:Q9HE05
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin conjugation factor E4 B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00878","PANTHER:PTHR13931:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugation factor E4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20H4.10","secondary_identifiers":["UniProtKB:Q9HE05"],"synonyms":[{"name":"Spom972h-UBE4B","type":"exact"},{"name":"UB fusion protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin fusion degradation protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HE05"}


id: PR:O74314
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC15D4.09c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystathionine gamma-synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15D4.09c","synonyms":[{"name":"O-succinylhomoserine (thiol)-lyase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC15D4.09c","type":"exact"}],"termid":"PR:O74314"}


id: PBO:0003108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L37a (predicted)","termid":"PBO:0003108"}


id: GO:0090267
data:
  {"annotated_genes":["SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116171],"is_not":false,"summary":null,"term":"GO:0090267"}]},"cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the mitotic cell cycle spindle assembly checkpoint, a cell cycle checkpoint that delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"positive regulation of spindle checkpoint","termid":"GO:0090232"},{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle spindle assembly checkpoint","termid":"GO:0090266"},{"relation_name":"positively_regulates","term_name":"mitotic spindle assembly checkpoint signaling","termid":"GO:0007094"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"}],"interesting_parent_ids":["GO:0000070","GO:0008150","GO:0007049","GO:0023052","GO:0044772"],"is_obsolete":false,"name":"positive regulation of mitotic cell cycle spindle assembly checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090267","terms_by_termid":{"GO:0090267":null}}


id: GO:0045743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fibroblast growth factor receptor signaling pathway activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of fibroblast growth factor receptor signaling pathway","termid":"GO:0040036"},{"relation_name":"positively_regulates","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of fibroblast growth factor receptor signaling pathway","synonyms":[{"name":"activation of fibroblast growth factor receptor signaling pathway","type":"narrow"},{"name":"positive regulation of FGF receptor signaling pathway","type":"exact"},{"name":"positive regulation of FGF receptor signalling pathway","type":"exact"},{"name":"positive regulation of FGFR signaling pathway","type":"exact"},{"name":"stimulation of fibroblast growth factor receptor signaling pathway","type":"narrow"},{"name":"up regulation of fibroblast growth factor receptor signaling pathway","type":"exact"},{"name":"up-regulation of fibroblast growth factor receptor signaling pathway","type":"exact"},{"name":"upregulation of fibroblast growth factor receptor signaling pathway","type":"exact"}],"termid":"GO:0045743"}


id: PBO:0002208
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.5.2","termid":"PBO:0002208"}


id: PR:O13871
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B3.06c gene.","definition_xrefs":["UniProtKB:O13871","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized methyltransferase C1B3.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.06c","synonyms":[{"name":"Spom972h-SPAC1B3.06c","type":"exact"}],"termid":"PR:O13871"}


id: PBO:0080036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 22","termid":"PBO:0080036"}


id: PBO:0005400
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.5.1.29","termid":"PBO:0005400"}


id: MOD:00072
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-methylglycine.","definition_xrefs":["RESID:AA0063","DeltaMass:0","ChEBI:15611","PubMed:1593629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 71.037114 Da","termid":"MOD:00570"},{"relation_name":"is_a","term_name":"methylated glycine","termid":"MOD:00714"},{"relation_name":"is_a","term_name":"alpha-amino monomethylated residue","termid":"MOD:01680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methylglycine","synonyms":[{"name":"L-sarcosine","type":"exact"},{"name":"MOD_RES N-methylglycine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N-methylated glycine","type":"exact"},{"name":"N-methylglycine","type":"exact"},{"name":"NMe1Gly","type":"exact"},{"name":"Sar","type":"exact"},{"name":"Sarcosine","type":"exact"},{"name":"Sarcosyl","type":"exact"},{"name":"methylaminoacetic acid","type":"exact"},{"name":"methylaminoethanoic acid","type":"exact"}],"termid":"MOD:00072"}


id: PATO:0001316
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A temperature which is increased by a medium degree.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased temperature","termid":"PATO:0001305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"moderate increased temperature","termid":"PATO:0001316"}


id: PBO:0069661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 938, pseudogene","termid":"PBO:0069661"}


id: GO:0085030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process carried out by symbiont gene products that enables a symbiotic interaction with a host organism, that is beneficial to the host organism.","definition_xrefs":["GOC:pdt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in symbiotic interaction","termid":"GO:0044403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiotic process benefiting host","synonyms":[{"name":"mutualism","type":"related"}],"termid":"GO:0085030"}


id: MONDO:0032859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 40","secondary_identifiers":["GARD:18411","OMIM:618664","UMLS:C5231451","MEDGEN:1684662","DOID:0111918"],"synonyms":[{"name":"SPERMATOGENIC FAILURE 40","type":"related"},{"name":"SPGF40","type":"related"}],"termid":"MONDO:0032859","xrefs":{"Monarch":{"xref_id":"0032859"}}}


id: PBO:0082856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of transport protein particle (TRAPP) complexes I-III; TRAPP complexes are related multimeric guanine nucleotide-exchange factor for the GTPase Ypt1p, regulating ER-Golgi traffic (TRAPPI), intra-Golgi traffic (TRAPPII), endosome-Golgi traffic (TRAPPII and III) and autophagy (TRAPPIII); human homolog is TRAPPC4","termid":"PBO:0082856"}


id: PBO:0074120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 30 member 5","termid":"PBO:0074120"}


id: MONDO:1010757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acrodermatitis enteropathica that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acrodermatitis enteropathica, non-human animal","termid":"MONDO:1010133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrodermatitis enteropathica, dog","secondary_identifiers":["OMIA:000593-9615"],"termid":"MONDO:1010757","xrefs":{"Monarch":{"xref_id":"1010757"}}}


id: PBO:0041694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caldesmon 1","termid":"PBO:0041694"}


id: MONDO:0018189
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive cerebellar ataxia-pyramidal signs-nystagmus-oculomotor apraxia syndrome is a rare, genetic, slowly progressive neurodegenerative disease characterized by delayed psychomotor development beginning in infancy, mild to profound intellectual disability, gait and stance ataxia, pyramidal signs (hyperreflexia, extensor plantar responses), dysarthria, and ocular abnormalities (e.g. nystagmus, oculomotor apraxia, abduction deficits, esotropia, ptosis). Brain imaging reveals progressive, generalized cerebellar atrophy, mild ventriculomegaly and, in some, retrocerebellar cysts.","definition_xrefs":["Orphanet:363429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid transport","termid":"MONDO:0019216"},{"relation_name":"is_a","term_name":"autosomal recessive metabolic cerebellar ataxia","termid":"MONDO:0020044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"autosomal recessive cerebellar ataxia - pyramidal signs - nystagmus - oculomotor apraxia syndrome","secondary_identifiers":["UMLS:C4706388","MEDGEN:1644588","GARD:17556"],"termid":"MONDO:0018189","xrefs":{"Monarch":{"xref_id":"0018189"}}}


id: PBO:0081805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 734, pseudogene","termid":"PBO:0081805"}


id: PBO:0075325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase 3","termid":"PBO:0075325"}


id: PATO:0001206
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of having sharp straight-edged teeth pointing to the apex.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serration","termid":"PATO:0001976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serrated","synonyms":[{"name":"serrate","type":"exact"}],"termid":"PATO:0001206"}


id: MONDO:0016140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deficiencies or mutations in the genes for the sarcoglycan complex subunits. A variety of phenotypes are associated with these mutations including a subgroup of autosomal recessive limb girdle muscular dystrophies, cardiomyopathies, and respiratory deficiency.","definition_xrefs":["MESH:D058088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative protein defects in neuromuscular diseases","termid":"MONDO:0016139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoglycanopathy","secondary_identifiers":["GARD:20389","MEDGEN:424705","Orphanet:207052","UMLS:C2936331"],"synonyms":[{"name":"qualitative or quantitative defects of sarcoglycan","type":"exact"}],"termid":"MONDO:0016140","xrefs":{"Monarch":{"xref_id":"0016140"}}}


id: PBO:0084341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kynurenine 3-monooxygenase; required for the de novo biosynthesis of NAD from tryptophan via kynurenine; expression regulated by Hst1p; putative therapeutic target for Huntington disease","termid":"PBO:0084341"}


id: GO:0014718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of activation of satellite cell involved in skeletal muscle regeneration. The activation of satellite cell is the process that initiates satellite cell division by causing it to move from quiescence to the G1 stage of the cell cycle. The cell swells and there are a number of other small changes. The cells then start to divide. Following cell division the cells will differentiate.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of satellite cell activation involved in skeletal muscle regeneration","termid":"GO:0014717"},{"relation_name":"is_a","term_name":"positive regulation of skeletal muscle tissue regeneration","termid":"GO:0043415"},{"relation_name":"is_a","term_name":"positive regulation of cell activation","termid":"GO:0050867"},{"relation_name":"positively_regulates","term_name":"satellite cell activation involved in skeletal muscle regeneration","termid":"GO:0014901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of satellite cell activation involved in skeletal muscle regeneration","termid":"GO:0014718"}


id: GO:0009490
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A mononuclear iron entity that serves as an electron acceptor and electron donor in an electron transport system.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete mononuclear iron electron carrier (obsolete GO:0009490)","synonyms":[{"name":"mononuclear iron electron carrier","type":"exact"}],"termid":"GO:0009490"}


id: GO:0106099
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction 2-dehydro-3-deoxy-L-rhamnonate = pyruvate + (S)-lactaldehyde.","definition_xrefs":["EC:4.1.2.53","GOC:imk","PMID:18754683"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"2-keto-3-deoxy-L-rhamnonate aldolase activity","secondary_identifiers":["RHEA:25784"],"termid":"GO:0106099"}


id: PBO:0089051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase with rhodanese domain, unknown specificity","termid":"PBO:0089051"}


id: PBO:0078213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 7-6","termid":"PBO:0078213"}


id: PBO:0073771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 4 member 4","termid":"PBO:0073771"}


id: PBO:0113142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein for yeast Rab family members; members include Ypt7p (most effective), Ypt1p, Ypt31p, and Ypt32p (in vitro); involved in vesicle mediated protein trafficking; regulates Ypt7p activity on late endosomes; contains a PH-like domain","termid":"PBO:0113142"}


id: PBO:0001360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S23 (predicted)","termid":"PBO:0001360"}


id: MONDO:0012235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinocerebellar ataxia autosomal recessive 7, also called SCAR7, is a slowly progressive hereditary form of spinocerebellar ataxia. Symptoms of SCAR7 can include difficulty walking and writing, speech difficulties (dysarthria), limb ataxia, and a decrease in the size of a region of the brain called the cerebellum (cerebellar atrophy). Of the few reported cases in the literature, some patients also had eye involvement that included nystagmus (in voluntary eye movements)and saccadic pursuit eye movements. Out of 5 affected siblings examined in a large Dutch family, 2 became wheelchair-dependent late in life. The severity of the symptoms varies from mild to severe. SCAR7 is caused by mutations in the TPP1 gene and is inherited in an autosomal recessive manner.","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive spinocerebellar ataxia 7","secondary_identifiers":["MESH:C563753","OMIM:609270","DOID:0080059","GARD:12232","Orphanet:284324","MEDGEN:324520","UMLS:C1836474"],"synonyms":[{"name":"SCAR7","type":"exact"},{"name":"autosomal recessive spinocerebellar ataxia type 7","type":"exact"},{"name":"childhood onset autosomal recessive slowly progressive spinocerebellar ataxia","type":"related"},{"name":"childhood-onset autosomal recessive slowly progressive spinocerebellar ataxia","type":"related"},{"name":"spinocerebellar ataxia autosomal recessive 7","type":"related"},{"name":"spinocerebellar ataxia, autosomal recessive 7","type":"related"},{"name":"spinocerebellar ataxia, autosomal recessive type 7","type":"exact"}],"termid":"MONDO:0012235","xrefs":{"Monarch":{"xref_id":"0012235"}}}


id: PBO:0044152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTDNEP1 pseudogene 1","termid":"PBO:0044152"}


id: GO:0090537
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ISWI complex that contains an ATPase subunit of the ISWI family (specifically SNF2L in mammals, which contain two ISWI homologs) and a CECR2 homolog. In mammals, CERF is involved in regulation of transcription from RNA polymerase II promoters.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ISWI-type complex","termid":"GO:0031010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"CERF complex","termid":"GO:0090537"}


id: GO:0090549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of a carbon source.","definition_xrefs":["GOC:tair_curators","PMID:18245858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to starvation","termid":"GO:0042594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to carbon starvation","termid":"GO:0090549"}


id: MONDO:0001436
data:
  {"annotated_genes":["SJAG_02117"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011417"}]},"cv_name":"mondo","definition":"Accumulation of iron in internal organs.","definition_xrefs":["NCIT:C82892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron metabolism disease","termid":"MONDO:0002279"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02117":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hemosiderosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D006486","DOID:12119","UMLS:C0019114","MEDGEN:42409","SCTID:39011001"],"synonyms":[{"name":"haemosiderosis","type":"exact"}],"termid":"MONDO:0001436","terms_by_termid":{"MONDO:0011417":null},"xrefs":{"Monarch":{"xref_id":"0001436"}}}


id: GO:2001106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Rho guanyl-nucleotide exchange factor activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of guanyl-nucleotide exchange factor activity","termid":"GO:1905097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of Rho guanyl-nucleotide exchange factor activity","synonyms":[{"name":"regulation of Rho guanine nucleotide exchange factor","type":"exact"},{"name":"regulation of RhoGEF","type":"exact"}],"termid":"GO:2001106"}


id: MOD:01927
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to O4'-glycosyltyrosine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosylated residue","termid":"MOD:00396"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-glycosyl-L-tyrosine","synonyms":[{"name":"OGlycoTyr","type":"exact"}],"termid":"MOD:01927"}


id: MOD:02047
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains a glycine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked glycine residue","synonyms":[{"name":"XlnkGly","type":"exact"}],"termid":"MOD:02047"}


id: GO:0036019
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An transient hybrid organelle formed by fusion of a late endosome with a lysosome, and in which active degradation takes place.","definition_xrefs":["GOC:pde","PMID:21878991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosome","termid":"GO:0005764"},{"relation_name":"is_a","term_name":"endosome","termid":"GO:0005768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005768","GO:0005575","GO:0005737","GO:0005773"],"is_obsolete":false,"name":"endolysosome","termid":"GO:0036019"}


id: GO:0000271
data:
  {"annotated_genes":["SJAG_01426","SJAG_02222","SJAG_01787","SJAG_04236","SJAG_02278","SJAG_04878","SJAG_02590","SJAG_04483","SJAG_01028","SJAG_04462","SJAG_01255","SJAG_00963","SJAG_04771","SJAG_00424","SJAG_02916","SJAG_04509","SJAG_03587","SJAG_00876","SJAG_04659","SJAG_01288","SJAG_03057","SJAG_03705","SJAG_05285","SJAG_03123","SJAG_01835","SJAG_01209","SJAG_04668","SJAG_00218","SJAG_04073","SJAG_04666","SJAG_00610","SJAG_02446","SJAG_00183","SJAG_01376","SJAG_01963","SJAG_01290","SJAG_01453","SJAG_04184"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93701,90076,101956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006078"},{"annotations":[105256,92816,94734,100118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051072"},{"annotations":[113873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030979"},{"annotations":[93948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[108790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[91078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051274"},{"annotations":[88622,108562,113874,117291,103673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[115316,108792,91079,105592,87544,107264,91068,112657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[102143,108101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[105594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051278"},{"annotations":[108388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005978"},{"annotations":[90415,78374],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045719"},{"annotations":[91900],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0060635"},{"annotations":[86996,91904],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[87371],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032951"},{"annotations":[104837,102346,90251,91888,117408,105406,91906,117533],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"},{"annotations":[88916,94422,91910,102348],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"},{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"carbohydrate biosynthetic process","termid":"GO:0016051"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00183":null,"SJAG_00218":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_00963":null,"SJAG_01028":null,"SJAG_01209":null,"SJAG_01255":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01376":null,"SJAG_01426":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_01963":null,"SJAG_02222":null,"SJAG_02278":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04073":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_04878":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"polysaccharide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"glycan biosynthesis","type":"exact"},{"name":"glycan biosynthetic process","type":"exact"},{"name":"polysaccharide anabolism","type":"exact"},{"name":"polysaccharide biosynthesis","type":"exact"},{"name":"polysaccharide formation","type":"exact"},{"name":"polysaccharide synthesis","type":"exact"}],"termid":"GO:0000271","terms_by_termid":{"GO:0005978":null,"GO:0006078":null,"GO:0030979":null,"GO:0032951":null,"GO:0034412":null,"GO:0034413":null,"GO:0045719":null,"GO:0051072":null,"GO:0051274":null,"GO:0051278":null,"GO:0060635":null,"GO:0070600":null,"GO:0070610":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: PBO:0049397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTSE1 divergent transcript","termid":"PBO:0049397"}


id: PR:O59801
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ski2 gene.","definition_xrefs":["UniProtKB:O59801","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase C550.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.03c","synonyms":[{"name":"Spom972h-ski2","type":"exact"}],"termid":"PR:O59801"}


id: PBO:0089286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferrochelatase Hem15","termid":"PBO:0089286"}


id: PBO:0069693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 972, pseudogene","termid":"PBO:0069693"}


id: _global:is_active_in
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c executes activity in d if and only if c enables p and p occurs_in d.  Assuming no action at a distance by gene products, if a gene product enables (is capable of) a process that occurs in some structure, it must have at least some part in that structure.","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"_global:functionally_related_to"},{"relation_name":"is_a","term_name":"overlaps","termid":"_global:overlaps"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_active_in","secondary_identifiers":["RO:0002432"],"synonyms":[{"name":"enables activity in","type":"exact"}],"termid":"_global:is_active_in"}


id: GO:0003968
data:
  {"annotated_genes":["SJAG_03356"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99068],"is_not":false,"summary":null,"term":"GO:0003968"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1); uses an RNA template, i.e. the catalysis of RNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time.","definition_xrefs":["EC:2.7.7.48","GOC:mah","GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5'-3' RNA polymerase activity","termid":"GO:0034062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03356":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016779","GO:0003824","GO:0140098","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"RNA-dependent RNA polymerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-192851","Reactome:R-HSA-9694549","Reactome:R-HSA-9694506","Reactome:R-HSA-9681651","Reactome:R-HSA-192624","Reactome:R-HSA-9828639","Reactome:R-HSA-192832","Reactome:R-HSA-9834736","Reactome:R-HSA-9837511","Reactome:R-HSA-9694792","Reactome:R-HSA-9694605","Reactome:R-HSA-9681674","Reactome:R-HSA-9694277","Reactome:R-HSA-168280","Reactome:R-HSA-9685681","Reactome:R-HSA-9834719","Reactome:R-HSA-192916","Reactome:R-HSA-9694581","MetaCyc:RNA-DIRECTED-RNA-POLYMERASE-RXN","Reactome:R-HSA-9685639","Reactome:R-HSA-168301","Reactome:R-HSA-9682563","Reactome:R-HSA-9682465","Reactome:R-HSA-9681840","Reactome:R-HSA-9694344"],"synonyms":[{"name":"RNA nucleotidyltransferase (RNA-directed) activity","type":"exact"},{"name":"RNA replicase activity","type":"related"},{"name":"RNA synthetase activity","type":"related"},{"name":"RNA-dependent RNA replicase activity","type":"exact"},{"name":"RNA-directed 5'-3' RNA polymerase activity","type":"exact"},{"name":"RNA-directed RNA polymerase activity","type":"exact"},{"name":"RdRP activity","type":"exact"},{"name":"transcriptase","type":"broad"}],"termid":"GO:0003968","terms_by_termid":{"GO:0003968":null}}


id: PBO:0063037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p21 (RAC1) activated kinase 4","termid":"PBO:0063037"}


id: PBO:0030495
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-stabilized_iron-sulfur_cluster_binding","termid":"PBO:0030495"}


id: PBO:0062895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OXCT1 antisense RNA 1","termid":"PBO:0062895"}


id: PBO:0062005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily H member 5 pseudogene","termid":"PBO:0062005"}


id: GO:0006776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any of the vitamin A compounds, retinol, retinal (retinaldehyde) and retinoic acid, all of which are derivatives of beta-carotene.","definition_xrefs":["PMID:1503811","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoid metabolic process","termid":"GO:0001523"},{"relation_name":"is_a","term_name":"fat-soluble vitamin metabolic process","termid":"GO:0006775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"vitamin A metabolic process","synonyms":[{"name":"vitamin A metabolism","type":"exact"}],"termid":"GO:0006776"}


id: PR:000050473
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein rho1 (Schizosaccharomyces pombe) that is non-covalently bound to GTP.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:10651902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP-binding protein rho1 (Schizosaccharomyces pombe 972h-)","termid":"PR:Q09914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho1/GTP+","pombase_gene_id":"SPAC1F7.04","synonyms":[{"name":"PomBase_original_PRO_term_name: GTP-binding protein rho1, GTP-bound form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rho1/GTP+","type":"exact"},{"name":"rho1/GTP+","type":"exact"}],"termid":"PR:000050473"}


id: PBO:0072418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 23","termid":"PBO:0072418"}


id: PBO:0113240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear-enriched ubiquitin-like polyubiquitin-binding protein; K48-Ub chain binding protein that also binds K63-linked chains in vitro; required for spindle pole body (SPB) duplication and for transit through the G2/M phase of the cell cycle; involved in proteolysis; interacts with the proteasome; contains an N-terminal Ub-like (UBL) and a C-terminal Ub-associated (UBA) domain; protein abundance increases in response to DNA replication stress","termid":"PBO:0113240"}


id: PBO:0049468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen synthase 2","termid":"PBO:0049468"}


id: PBO:0042835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP20DC antisense RNA 1","termid":"PBO:0042835"}


id: GO:0031935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that affects the rate, extent or location of chromatin silencing.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of chromatin silencing (obsolete GO:0031935)","synonyms":[{"name":"regulation of heterochromatic silencing","type":"related"}],"termid":"GO:0031935"}


id: GO:0034855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: androst-4-ene-3,17-dione + O2 + 2 H+ + 2 e- = 9alpha-hydroxy-4-androstene-3,17-dione + H2O.","definition_xrefs":["UM-BBD_reactionID:r1153"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-AD 9alpha-hydroxylase activity (obsolete GO:0034855)","termid":"GO:0034855"}


id: MONDO:0002791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A medulloblastoma composed of large cells with prominent nucleoli and a larger amount of cytoplasm in contrast with the cells of the classic medulloblastoma.","definition_xrefs":["NCIT:C6904"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medulloblastoma","termid":"MONDO:0007959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"large cell medulloblastoma","secondary_identifiers":["ICDO:9474/3","DOID:3857","EFO:0008508","MEDGEN:226852","UMLS:C1266180"],"synonyms":[{"name":"large cell medulloblastoma","type":"exact"},{"name":"large cell medulloblastoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0002791","xrefs":{"Monarch":{"xref_id":"0002791"}}}


id: GO:0018905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dimethyl ether, CH3-O-CH3, the simplest ether. Dimethyl ether, also known wood ether and methyl ether, is a colorless gas that has been used in refrigeration applications.","definition_xrefs":["UM-BBD_pathwayID:dme"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dimethyl ether metabolic process","synonyms":[{"name":"dimethyl ether metabolism","type":"exact"},{"name":"methyl ether metabolic process","type":"exact"},{"name":"methyl ether metabolism","type":"exact"}],"termid":"GO:0018905"}


id: GO:0140776
data:
  {"annotated_genes":["SJAG_01530","SJAG_04187","SJAG_03025","SJAG_03345","SJAG_02624","SJAG_04566"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140775"},{"annotations":[92024,92025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003789"},{"annotations":[88746,103716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140545"},{"annotations":[117650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0170060"},{"annotations":[112272,96016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008568"}]},"cv_name":"molecular_function","definition":"A molecular function that involves direct binding to one of the subunits of a protein-containing complex and promoting the dissociation of one or many subunits. This often happens by changing the conformation of the protein being bound, which decreases its affinity for the rest of the complex.","definition_xrefs":["PMID:34836783","PMID:29779865","PMID:23727094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01530":null,"SJAG_02624":null,"SJAG_03025":null,"SJAG_03345":null,"SJAG_04187":null,"SJAG_04566":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"protein-containing complex destabilizing activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein unfoldase activity","type":"broad"}],"termid":"GO:0140776","terms_by_termid":{"GO:0003789":null,"GO:0008568":null,"GO:0140545":null,"GO:0140775":null,"GO:0170060":null}}


id: PBO:0046097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4B","termid":"PBO:0046097"}


id: PBO:0077374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 115","termid":"PBO:0077374"}


id: MONDO:0010305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked creatine transporter deficiency (CRTR-D) is a creatine deficiency syndrome characterized clinically by global developmental delay/ intellectual disability (DD/ID) with prominent speech/language delay, autistic behavior and seizures.","definition_xrefs":["Orphanet:52503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral creatine deficiency syndrome","termid":"MONDO:0000456"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"creatine transporter deficiency","secondary_identifiers":["OMIM:300352","DOID:0050800","SCTID:698290008","MEDGEN:337451","NORD:1966","ICD9:758.81","UMLS:C1845862","NCIT:C125665","GARD:1608","NANDO:1201035","MESH:C535598","NANDO:2201301"],"synonyms":[{"name":"CCDS1","type":"related"},{"name":"SLC6A8 deficiency","type":"exact"},{"name":"X-linked creatine deficiency","type":"related"},{"name":"X-linked creatine deficiency syndrome","type":"related"},{"name":"X-linked creatine transporter deficiency","type":"related"},{"name":"cerebral creatine deficiency syndrome 1","type":"exact"},{"name":"cerebral creatine deficiency syndrome 1, X-linked recessive","type":"exact"},{"name":"cerebral creatine deficiency syndrome type 1","type":"exact"},{"name":"creatine deficiency syndrome, X-linked","type":"related"},{"name":"creatine deficiency, X-linked","type":"related"},{"name":"creatine transporter defect","type":"related"},{"name":"creatine transporter deficiency","type":"exact"},{"name":"intellectual disability, X-linked with seizures, short stature and midface hypoplasia","type":"related"},{"name":"intellectual disability, X-linked, with creatine Transport deficiency","type":"related"},{"name":"intellectual disability, X-linked, with creatine transport deficiency","type":"related"},{"name":"intellectual disability, X-linked, with seizures, short stature, and midface hypoplasia","type":"related"},{"name":"mental retardation, X-linked with seizures, short stature and midface hypoplasia","type":"related"},{"name":"mental retardation, X-linked, with creatine Transport deficiency","type":"related"},{"name":"mental retardation, X-linked, with creatine transport deficiency","type":"related"},{"name":"mental retardation, X-linked, with seizures, short stature, and midface hypoplasia","type":"related"}],"termid":"MONDO:0010305","xrefs":{"Monarch":{"xref_id":"0010305"}}}


id: PBO:0113085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic aspartyl aminopeptidase with possible vacuole function; targeted to vacuole via Vps10p-dependent endosomal vacuolar protein sorting pathway and via CVT pathway; cleaves unblocked N-terminal acidic amino acids from peptide substrates; forms 12-subunit homo-oligomer; M18 metalloprotease family","termid":"PBO:0113085"}


id: MONDO:0015998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated ectopia lentis (IEL) is a rare, clinically variable, eye disorder characterized by dislocation of the lens, often causing significant reduction in visual acuity.","definition_xrefs":["Orphanet:1885"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Marfan and Marfan-related disorder","termid":"MONDO:0017310"},{"relation_name":"is_a","term_name":"lens disorder","termid":"MONDO:0001176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated ectopia lentis","secondary_identifiers":["MedDRA:10014145","MEDGEN:342716","DOID:0111148","GARD:12251","MESH:C536184","PMID:20141359","SCTID:74969002","UMLS:C1851286","NCIT:C34566"],"synonyms":[{"name":"IEL","type":"exact"},{"name":"congenital ectopic lens","type":"related"},{"name":"ectopia lentis syndrome","type":"exact"},{"name":"familial ectopia lentis","type":"exact"},{"name":"isolated lens position anomaly","type":"exact"},{"name":"nonsyndromic lens position anomaly","type":"exact"}],"termid":"MONDO:0015998","xrefs":{"Monarch":{"xref_id":"0015998"}}}


id: PBO:0077271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM11 divergent transcript","termid":"PBO:0077271"}


id: GO:0052374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent to which it enters into the host organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of entry into host (obsolete GO:0052374)","synonyms":[{"name":"down regulation by symbiont of entry into host","type":"exact"},{"name":"down-regulation by symbiont of entry into host","type":"exact"},{"name":"downregulation by symbiont of entry into host","type":"exact"},{"name":"inhibition by symbiont of entry into host","type":"narrow"}],"termid":"GO:0052374"}


id: PBO:0004427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UNC-50 family protein","termid":"PBO:0004427"}


id: MONDO:0023557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious process affecting the vagina. Symptoms include pain and purulent discharge.","definition_xrefs":["NCIT:C84353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginitis","termid":"MONDO:0002234"},{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infective vaginitis","secondary_identifiers":["SCTID:237091009","icd11.foundation:1436361154","MEDGEN:140795","UMLS:C0404521"],"synonyms":[{"name":"Infective vaginitis","type":"related"},{"name":"PV - Vaginal infection","type":"related"},{"name":"Vaginal Infection","type":"related"},{"name":"Vaginal infection","type":"related"},{"name":"vaginal infection","type":"exact"}],"termid":"MONDO:0023557","xrefs":{"Monarch":{"xref_id":"0023557"}}}


id: MONDO:0003288
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of leiomyoma characterized by the presence of pleomorphic muscle cells with bizarre hyperchromatic nuclei and eosinophilic cytoplasm.","definition_xrefs":["NCIT:C4257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bizarre leiomyoma","secondary_identifiers":["DOID:5127","MEDGEN:90789","UMLS:C0334478","ICDO:8893/0"],"synonyms":[{"name":"Symplastic leiomyoma","type":"exact"},{"name":"atypical leiomyoma","type":"exact"},{"name":"bizarre leiomyoma","type":"exact"},{"name":"pleomorphic leiomyoma","type":"exact"}],"termid":"MONDO:0003288","xrefs":{"Monarch":{"xref_id":"0003288"}}}


id: PBO:0083613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dynamin-like GTPase that mediates homotypic ER fusion; has a role in ER morphology; interacts physically and genetically with Yop1p and Rtn1p; functional ortholog of the human atlastin ATL1, defects in which cause a form of the human disease hereditary spastic paraplegia; homolog of Arabidopsis RHD3","termid":"PBO:0083613"}


id: PBO:0064667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 2","termid":"PBO:0064667"}


id: GO:0019292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-tyrosine from other compounds, including chorismate, via the intermediate 4-hydroxyphenylpyruvate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine biosynthetic process","termid":"GO:0006571"},{"relation_name":"is_a","term_name":"chorismate metabolic process","termid":"GO:0046417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"L-tyrosine biosynthetic process from chorismate via 4-hydroxyphenylpyruvate","secondary_identifiers":["MetaCyc:TYRSYN"],"synonyms":[{"name":"L-tyrosine anabolism from chorismate via 4-hydroxyphenylpyruvate","type":"exact"},{"name":"L-tyrosine biosynthetic process from chorismate via p-hydroxyphenylpyruvate","type":"exact"},{"name":"L-tyrosine formation from chorismate via 4-hydroxyphenylpyruvate","type":"exact"},{"name":"L-tyrosine synthesis from chorismate via 4-hydroxyphenylpyruvate","type":"exact"},{"name":"tyrosine biosynthetic process from chorismate via 4-hydroxyphenylpyruvate","type":"broad"}],"termid":"GO:0019292"}


id: GO:0046936
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxyadenosine + H+ + H2O = 2'-deoxyinosine + NH4+.","definition_xrefs":["GOC:ai","RHEA:28190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"2'-deoxyadenosine deaminase activity","secondary_identifiers":["MetaCyc:ADDALT-RXN"],"synonyms":[{"name":"deoxyadenosine deaminase reaction","type":"exact"}],"termid":"GO:0046936"}


id: FYPO:0005241
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-tyrosine measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular tyrosine level","synonyms":[{"name":"decreased cellular L-tyrosine level","type":"exact"},{"name":"decreased cellular tyrosine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular tyrosine level during vegetative growth","type":"exact"},{"name":"decreased level of tyrosine in cell","type":"exact"},{"name":"reduced cellular tyrosine level","type":"exact"},{"name":"reduced level of tyrosine in cell","type":"exact"}],"termid":"FYPO:0005241"}


id: PBO:0001432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal DNA (rDNA) transcription factor Rrn3","termid":"PBO:0001432"}


id: MONDO:0006776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hairy cell leukemia (obsolete MONDO:0006776)","termid":"MONDO:0006776","xrefs":{"Monarch":{"xref_id":"0006776"}}}


id: SO:0000032
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA molecules that have been selected from random pools based on their ability to bind other molecules.","direct_ancestors":[{"relation_name":"is_a","term_name":"aptamer","termid":"SO:0000031"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA_aptamer","synonyms":[{"name":"DNA aptamer","type":"exact"}],"termid":"SO:0000032"}


id: MONDO:0018968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Iniencephaly is a rare form of neural tube defect in which a malformation of the cervico-occipital junction is associated with a malformation of the central nervous system.","definition_xrefs":["Orphanet:63259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural tube defect","termid":"MONDO:0018075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"iniencephaly","secondary_identifiers":["ICD10CM:Q00.2","SCTID:2438005","UMLS:C0152234","GARD:10506","MedDRA:10022034","icd11.foundation:1558931335","MEDGEN:57756","NCIT:C124549","ICD9:740.2"],"termid":"MONDO:0018968","xrefs":{"Monarch":{"xref_id":"0018968"}}}


id: MONDO:0017165
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bile acid CoA ligase deficiency and defective amidation is an anomaly of bile acid synthesis characterized by fat malabsorption, neonatal cholestasis and growth failure.","definition_xrefs":["Orphanet:276066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of bile acid synthesis","termid":"MONDO:0019218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"bile acid CoA ligase deficiency and defective amidation","secondary_identifiers":["MEDGEN:905864","GARD:21041","UMLS:C4274079","SCTID:717047007"],"termid":"MONDO:0017165","xrefs":{"Monarch":{"xref_id":"0017165"}}}


id: FYPO:0006412
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more histone RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells) during S phase of the mitotic cell cycle. Histone RNAs are transcribed from genes encoding histones.","definition_xrefs":["PMID:17452352","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of histone gene mRNA during vegetative growth","termid":"FYPO:0004906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"decreased level of histone gene mRNA during mitotic S phase","synonyms":[{"name":"decreased histone gene mRNA accumulation during mitotic S phase","type":"related"},{"name":"decreased level of histone gene RNA during mitotic S phase","type":"exact"},{"name":"decreased level of histone gene mRNA during S phase of mitotic cell cycle","type":"exact"},{"name":"decreased level of histone gene transcripts during mitotic S phase","type":"exact"},{"name":"reduced level of histone gene mRNA during mitotic S phase","type":"exact"}],"termid":"FYPO:0006412"}


id: PBO:0062685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily A member 6 pseudogene","termid":"PBO:0062685"}


id: MONDO:0015743
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic bilateral vestibulopathy is a rare otorhinolaryngologic disease characterized by dysfunction of both peripheral labyrinths or of the eighth nerves, which presents with persistent unsteadiness of gait (particularly in darkness, during eye closure or under impaired visual conditions, or when standing/walking on uneven, soft or wobbly ground) and oscillopsia associated with head movements. The disease may be progressive, presenting no episodes of vertigo, or sequential, presenting recurrent episodes of vertigo.","definition_xrefs":["Orphanet:171684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic bilateral vestibulopathy","secondary_identifiers":["GARD:20124","MEDGEN:1622940","SCTID:737580004","UMLS:C4545229","icd11.foundation:1394072237"],"termid":"MONDO:0015743","xrefs":{"Monarch":{"xref_id":"0015743"}}}


id: GO:0005673
data:
  {"annotated_genes":["SJAG_00116","SJAG_00159"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97104,114566],"is_not":false,"summary":null,"term":"GO:0005673"}]},"cv_name":"cellular_component","definition":"A transcription factor which in humans consists of a complex of two alpha and two beta chains. Recruits TFIIH to the initiation complex and helps activate both RNA polymerase II and TFIIH.","definition_xrefs":["PMID:16547462","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"},{"relation_name":"part_of","term_name":"RNA polymerase II, holoenzyme","termid":"GO:0016591"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00116":null,"SJAG_00159":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005654","GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"transcription factor TFIIE complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005673","terms_by_termid":{"GO:0005673":null}}


id: FYPO:0005095
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at replication origins is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to chromatin during vegetative growth","termid":"FYPO:0001508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to chromatin at replication origin","synonyms":[{"name":"abolished protein localisation to chromatin at replication origin during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromatin at replication origin during mitotic cell cycle","type":"related"},{"name":"protein localization to chromatin at replication origin during vegetative growth abolished","type":"exact"}],"termid":"FYPO:0005095"}


id: PBO:0040379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk subunit OSCP","termid":"PBO:0040379"}


id: PBO:0085123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein; forms a complex with Nop14p that mediates maturation and nuclear export of 40S ribosomal subunits; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0085123"}


id: GO:0120001
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A scallop-shaped plaque, also referred to as an asymmetric unit membrane (AUM), found in the apical plasma membrane of urothelial superficial (umbrella) cells which form a a barrier to the passage of water and soluble toxic compounds found in urine. The plaques are thickened regions of membrane composed of uroplakin transmembrane proteins which form a crystalline array.","definition_xrefs":["PMID:21887288","GOC:krc","PMID:21468280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane","termid":"GO:0005886"},{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"},{"relation_name":"part_of","term_name":"apical plasma membrane","termid":"GO:0016324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005886"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"apical plasma membrane urothelial plaque","synonyms":[{"name":"AUM","type":"related"},{"name":"asymmetric unit membrane","type":"exact"}],"termid":"GO:0120001"}


id: PBO:0041161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 16","termid":"PBO:0041161"}


id: SO:0001551
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that increases the rate of transcription with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rate_of_transcription_variant","termid":"SO:0001550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased_transcription_rate_variant","synonyms":[{"name":"increased transcription rate variant","type":"exact"}],"termid":"SO:0001551"}


