# terms

id: MONDO:1012245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rod-cone degeneration, non-human animal","termid":"MONDO:1011981"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rod-cone degeneration, domestic cat","secondary_identifiers":["OMIA:000880-9685"],"termid":"MONDO:1012245","xrefs":{"Monarch":{"xref_id":"1012245"}}}


id: MONDO:0020493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Haddad syndrome is a rare congenital disorder in which congenital central hypoventilation syndrome (CCHS), or Ondine syndrome, occurs concurrently with Hirschsprung disease.","definition_xrefs":["Orphanet:99803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal motility disease","termid":"MONDO:0021189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Haddad syndrome","secondary_identifiers":["MEDGEN:347052","UMLS:C1859049","GARD:16909","icd11.foundation:1685926536","ICD10CM:G47.3","SCTID:719972004"],"synonyms":[{"name":"Haddad syndrome","type":"exact"},{"name":"congenital central alveolar hypoventilation-Hirschsprung disease syndrome","type":"exact"},{"name":"ondine-Hirschsprung disease","type":"exact"},{"name":"ondine-Hirschsprung syndrome","type":"exact"}],"termid":"MONDO:0020493","xrefs":{"Monarch":{"xref_id":"0020493"}}}


id: PBO:0057005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 99a","termid":"PBO:0057005"}


id: MONDO:0001778
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign hamartomatous tumor that possesses various epidermal derivatives and is due to sequestration of skin along the lines of embryonic closure.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin cancer","termid":"MONDO:0002898"},{"relation_name":"is_a","term_name":"dermoid cyst","termid":"MONDO:0002378"},{"relation_name":"is_a","term_name":"skin neoplasm","termid":"MONDO:0002531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dermoid cyst of skin","secondary_identifiers":["MEDGEN:91148","SCTID:276729007","UMLS:C0349502","NCIT:C4632","DOID:13691"],"synonyms":[{"name":"cutaneous dermoid cyst","type":"exact"},{"name":"cystic skin teratoma","type":"exact"},{"name":"dermoid cyst of skin","type":"exact"},{"name":"dermoid cyst of skin (finding)","type":"exact"},{"name":"dermoid cyst of the skin","type":"exact"},{"name":"skin dermoid","type":"exact"},{"name":"skin dermoid cyst","type":"exact"},{"name":"subcutaneous dermoid cyst","type":"exact"},{"name":"zone of skin dermoid cyst","type":"exact"}],"termid":"MONDO:0001778","xrefs":{"Monarch":{"xref_id":"0001778"}}}


id: PATO:0002238
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved forward or upward.","direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antrorse","termid":"PATO:0002238"}


id: PBO:0060707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 4","termid":"PBO:0060707"}


id: GO:0034089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the sister chromatids of a replicated chromosome become joined along the entire length of the chromosome during S phase during a meiotic cell cycle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of sister chromatid cohesion","termid":"GO:0034085"},{"relation_name":"part_of","term_name":"meiotic sister chromatid cohesion","termid":"GO:0051177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"establishment of meiotic sister chromatid cohesion","termid":"GO:0034089"}


id: GO:0075303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of frequency, rate or extent of basidiospore formation, a process in which a sexually produced fungal spore is formed on a basidium in the fungi basidiomycetes.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043941"},{"relation_name":"is_a","term_name":"regulation of basidiospore formation","termid":"GO:0075302"},{"relation_name":"positively_regulates","term_name":"basidiospore formation","termid":"GO:0034295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of basidiospore formation","termid":"GO:0075303"}


id: SO:0001803
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript processing variant whereby polyadenylation of the encoded transcript is decreased with respect to the reference.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyadenylation_variant","termid":"SO:0001545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased_polyadenylation_variant","synonyms":[{"name":"decreased polyadenylation variant","type":"exact"}],"termid":"SO:0001803"}


id: PR:Q9P7D3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP4H10.16c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7D3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WHI2-like protein P4H10.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.16c","synonyms":[{"name":"Spom972h-SPBP4H10.16c","type":"exact"}],"termid":"PR:Q9P7D3"}


id: PBO:0072981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 3A member 2","termid":"PBO:0072981"}


id: PBO:0087593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ASTRA complex, involved in chromatin remodeling; telomere length regulator involved in the stability or biogenesis of PIKKs such as TORC1","termid":"PBO:0087593"}


id: PBO:0002739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human ZNF277 ortholog","termid":"PBO:0002739"}


id: PBO:0065947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD9 checkpoint clamp component A","termid":"PBO:0065947"}


id: PBO:0056236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGI2 antisense RNA 3","termid":"PBO:0056236"}


id: GO:1902228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of macrophage colony-stimulating factor signaling pathway.","definition_xrefs":["PMID:16705167","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of macrophage colony-stimulating factor signaling pathway","termid":"GO:1902226"},{"relation_name":"positively_regulates","term_name":"macrophage colony-stimulating factor signaling pathway","termid":"GO:0038145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of macrophage colony-stimulating factor signaling pathway","synonyms":[{"name":"activation of M-CSF signaling pathway","type":"narrow"},{"name":"activation of macrophage colony-stimulating factor signaling pathway","type":"narrow"},{"name":"activation of macrophage colony-stimulating factor signalling pathway","type":"narrow"},{"name":"positive regulation of M-CSF signaling pathway","type":"exact"},{"name":"positive regulation of macrophage colony-stimulating factor signalling pathway","type":"exact"},{"name":"up regulation of M-CSF signaling pathway","type":"exact"},{"name":"up regulation of macrophage colony-stimulating factor signaling pathway","type":"exact"},{"name":"up regulation of macrophage colony-stimulating factor signalling pathway","type":"exact"},{"name":"up-regulation of M-CSF signaling pathway","type":"exact"},{"name":"up-regulation of macrophage colony-stimulating factor signaling pathway","type":"exact"},{"name":"up-regulation of macrophage colony-stimulating factor signalling pathway","type":"exact"},{"name":"upregulation of M-CSF signaling pathway","type":"exact"},{"name":"upregulation of macrophage colony-stimulating factor signaling pathway","type":"exact"},{"name":"upregulation of macrophage colony-stimulating factor signalling pathway","type":"exact"}],"termid":"GO:1902228"}


id: GO:0039702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Viral budding which uses a host ESCRT protein complex, or complexes, to mediate the budding process.","definition_xrefs":["UniProtKB-KW:KW-1187","VZ:1536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral budding","termid":"GO:0046755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral budding via host ESCRT complex","synonyms":[{"name":"host-assisted viral budding","type":"broad"},{"name":"viral budding through the ESCRT machinery","type":"related"}],"termid":"GO:0039702"}


id: PBO:0048718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin pseudogene 1","termid":"PBO:0048718"}


id: PBO:0051302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-42 (non-functional)","termid":"PBO:0051302"}


id: GO:0043538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the transfer of one or more phosphate groups to an actin molecule.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of actin phosphorylation (obsolete GO:0043538)","termid":"GO:0043538"}


id: GO:1905744
data:
  {"annotated_genes":["SJAG_01040","SJAG_01511"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98069],"is_not":false,"summary":null,"term":"GO:1905744"},{"annotations":[117910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905746"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mRNA cis splicing, via spliceosome.","definition_xrefs":["PMID:2880558","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA splicing, via spliceosome","termid":"GO:0048024"},{"relation_name":"regulates","term_name":"mRNA cis splicing, via spliceosome","termid":"GO:0045292"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01040":null,"SJAG_01511":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"regulation of mRNA cis splicing, via spliceosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of nuclear mRNA cis splicing, via U2-type spliceosome","type":"narrow"},{"name":"regulation of nuclear mRNA cis splicing, via spliceosome","type":"exact"},{"name":"regulation of splicing","type":"broad"}],"termid":"GO:1905744","terms_by_termid":{"GO:1905744":null,"GO:1905746":null}}


id: PBO:0087091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L7B; required for processing of 27SA3 pre-rRNA to 27SB pre-rRNA during assembly of large ribosomal subunit; depletion leads to a turnover of pre-rRNA; contains a conserved C-terminal Nucleic acid Binding Domain (NDB2); binds to Domain II of 25S and 5.8S rRNAs; homologous to mammalian ribosomal protein L7 and bacterial L30; RPL7B has a paralog, RPL7A, that arose from the whole genome duplication","termid":"PBO:0087091"}


id: PBO:0086921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative Zn(II)2Cys6 motif containing transcription factor; non-essential gene identified in a screen for mutants with increased levels of rDNA transcription; similar to S. kluyveri Urc2p involved in uracil catabolism","termid":"PBO:0086921"}


id: GO:1901431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to cycloalkane.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to cycloalkane","termid":"GO:0014071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to cycloalkane","termid":"GO:1901431"}


id: PBO:0064794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPM1L divergent transcript","termid":"PBO:0064794"}


id: GO:0016322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmentally regulated remodeling of neuronal projections such as pruning to eliminate the extra dendrites and axons projections set up in early stages of nervous system development.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron maturation","termid":"GO:0042551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron remodeling","synonyms":[{"name":"axon pruning","type":"narrow"},{"name":"neuron remodelling","type":"exact"},{"name":"neuronal remodeling","type":"exact"}],"termid":"GO:0016322"}


id: GO:0085013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the symbiont organism by a type VII secretion system. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via protein secreted by type VII secretion system (obsolete GO:0085013)","termid":"GO:0085013"}


id: RO:0002586
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p results in breakdown of c if and only if the execution of p leads to c no longer being present at the end of p","direct_ancestors":[{"relation_name":"is_a","term_name":"has_input","termid":"RO:0002233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_breakdown_of","termid":"RO:0002586"}


id: PBO:0044772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 54","termid":"PBO:0044772"}


id: PBO:0017831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZIP zinc transmembrane transporter Zrt2 (predicted)","termid":"PBO:0017831"}


id: GO:0043411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to myopalladin, a myofibrillar protein with titin-like Ig domains.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete myopalladin binding (obsolete GO:0043411)","synonyms":[{"name":"myopalladin binding","type":"exact"}],"termid":"GO:0043411"}


id: FYPO:0001564
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-ornithine measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular ornithine level","secondary_identifiers":["FYPO:0001618"],"synonyms":[{"name":"decreased cellular L-ornithine level","type":"exact"},{"name":"decreased cellular ornithine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular ornithine level during vegetative growth","type":"exact"},{"name":"decreased ornithine accumulation","type":"related"},{"name":"reduced cellular ornithine level","type":"exact"}],"termid":"FYPO:0001564"}


id: PBO:0067948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 250","termid":"PBO:0067948"}


id: PBO:0064909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP4R1 antisense RNA 1","termid":"PBO:0064909"}


id: MONDO:0021339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that involves the hard palate.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hard palate cancer","termid":"MONDO:0004719"},{"relation_name":"is_a","term_name":"oral cavity carcinoma","termid":"MONDO:0044925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"carcinoma of hard palate","secondary_identifiers":["NCIT:C8394","UMLS:C0345550","SCTID:254434008","MEDGEN:138019"],"synonyms":[{"name":"carcinoma of hard palate","type":"exact"},{"name":"carcinoma of the hard palate","type":"exact"},{"name":"hard palate carcinoma","type":"exact"}],"termid":"MONDO:0021339","xrefs":{"Monarch":{"xref_id":"0021339"}}}


id: GO:0070961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the directed killing of a symbiont target cell by a neutrophil.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to biotic stimulus","termid":"GO:0002833"},{"relation_name":"is_a","term_name":"positive regulation of defense response","termid":"GO:0031349"},{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"is_a","term_name":"positive regulation of killing of cells of another organism","termid":"GO:0051712"},{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of symbiont cell","termid":"GO:0070949"},{"relation_name":"is_a","term_name":"positive regulation of neutrophil mediated cytotoxicity","termid":"GO:0070960"},{"relation_name":"positively_regulates","term_name":"neutrophil-mediated killing of symbiont cell","termid":"GO:0070943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neutrophil mediated killing of symbiont cell","synonyms":[{"name":"activation of neutrophil mediated killing of symbiont cell","type":"narrow"},{"name":"stimulation of neutrophil mediated killing of symbiont cell","type":"narrow"},{"name":"up regulation of neutrophil mediated killing of symbiont cell","type":"exact"},{"name":"up-regulation of neutrophil mediated killing of symbiont cell","type":"exact"},{"name":"upregulation of neutrophil mediated killing of symbiont cell","type":"exact"}],"termid":"GO:0070961"}


id: GO:0070448
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + laricitrin = S-adenosyl-L-homocysteine + syringetin.","definition_xrefs":["RHEA:25633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"laricitrin 5'-O-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R06816","MetaCyc:RXN-8452"],"synonyms":[{"name":"CrCOMT2","type":"related"},{"name":"S-adenosyl-L-methionine:myricetin O-methyltransferase activity","type":"related"},{"name":"flavonoid 3',5'-O-dimethyltransferase activity","type":"related"}],"termid":"GO:0070448"}


id: PR:O13761
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17A2.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17A2.11, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A2.11","synonyms":[{"name":"Spom972h-SPAC17A2.11","type":"exact"}],"termid":"PR:O13761"}


id: MONDO:0001050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An otitis externa which involves infection of the external ear that has spread to involve the skull bone containing part of the ear canal, the middle ear, and the inner ear. It is caused by the bacteria Pseudomonas. This is common in people with weakened immune systems and in older people with diabetes.","definition_xrefs":["DOID:10516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otitis externa","termid":"MONDO:0004795"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant otitis externa","secondary_identifiers":["UMLS:C0155395","MEDGEN:509950","ICD10CM:H60.2","icd11.foundation:984580942","ICD9:380.14","SCTID:94146005"],"termid":"MONDO:0001050","xrefs":{"Monarch":{"xref_id":"0001050"}}}


id: PBO:0075447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 2","termid":"PBO:0075447"}


id: MOD:00311
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-cysteine coenzyme A disulfide.","definition_xrefs":["DeltaMass:0","PubMed:1734967","Unimod:281#C","RESID:AA0306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"disulfide conjugated residue","termid":"MOD:01862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteine coenzyme A disulfide","synonyms":[{"name":"(2R)-2-amino-3-(2-((3-(((2R)-2,4-dihydroxy-3,3-dimethyl-1-oxobutyl)amino)-1-oxopropyl)amino)ethyl)dithio-propanoic acid 4'-ester with adenosine 5'-(trihydrogen diphosphate) 3'-(dihydrogen phosphate)","type":"exact"},{"name":"CoenzymeA","type":"related"},{"name":"Cysteine modified Coenzyme A","type":"related"},{"name":"L-cysteine coenzyme A disulfide","type":"exact"},{"name":"SCoACys","type":"exact"},{"name":"coenzyme A L-cysteine mixed disulfide","type":"exact"}],"termid":"MOD:00311"}


id: GO:0006539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of glutamate, via the intermediate 2-oxoglutarate.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamate catabolic process via 2-oxoglutarate (obsolete GO:0006539)","synonyms":[{"name":"glutamate breakdown via 2-oxoglutarate","type":"exact"},{"name":"glutamate catabolic process via 2-ketoglutarate","type":"exact"},{"name":"glutamate catabolic process via alpha-ketoglutarate","type":"exact"},{"name":"glutamate catabolic process via alpha-oxoglutarate","type":"exact"},{"name":"glutamate catabolism via 2-ketoglutarate","type":"exact"},{"name":"glutamate catabolism via alpha-ketoglutarate","type":"exact"},{"name":"glutamate catabolism via alpha-oxoglutarate","type":"exact"},{"name":"glutamate degradation via 2-oxoglutarate","type":"exact"}],"termid":"GO:0006539"}


id: PBO:0053152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase B pseudogene 1","termid":"PBO:0053152"}


id: GO:1900338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of methane biosynthetic process from carbon monoxide.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from carbon monoxide","termid":"GO:1900336"},{"relation_name":"is_a","term_name":"positive regulation of alkane biosynthetic process","termid":"GO:1901579"},{"relation_name":"is_a","term_name":"positive regulation of cellular respiration","termid":"GO:1901857"},{"relation_name":"positively_regulates","term_name":"methane biosynthetic process from carbon monoxide","termid":"GO:2001134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"positive regulation of methane biosynthetic process from carbon monoxide","synonyms":[{"name":"activation of methane biosynthetic process from carbon monoxide","type":"narrow"},{"name":"up regulation of methane biosynthetic process from carbon monoxide","type":"exact"},{"name":"up-regulation of methane biosynthetic process from carbon monoxide","type":"exact"},{"name":"upregulation of methane biosynthetic process from carbon monoxide","type":"exact"}],"termid":"GO:1900338"}


id: PBO:0001164
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.-.-","termid":"PBO:0001164"}


id: PBO:0090734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein kinase regulator Atg11","termid":"PBO:0090734"}


id: PBO:0030588
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_aspartate_level","termid":"PBO:0030588"}


id: SO:0000982
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcription terminator that is not dependent upon Rho. Rather, the mRNA contains a sequence that allows it to base-pair with itself and make a stem-loop structure.","direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial_terminator","termid":"SO:0000614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho_independent_bacterial_terminator","synonyms":[{"name":"rho independent bacterial terminator","type":"exact"}],"termid":"SO:0000982"}


id: GO:0071237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bacteriocin stimulus. A bacteriocin is a protein substance released by certain bacteria that kills but does not lyse closely related strains of bacteria. Specific bacteriocins attach to specific receptors on cell walls and induce specific metabolic block, e.g. cessation of nucleic acid or protein synthesis of oxidative phosphorylation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to bacteriocin","termid":"GO:0046678"},{"relation_name":"is_a","term_name":"cellular response to antibiotic","termid":"GO:0071236"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to bacteriocin","termid":"GO:0071237"}


id: MONDO:0012280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A multiple malformation syndrome characterized by Hirschprung megacolon with microcephaly, hypertelorism, submucous cleft palate, short stature and learning disability.","definition_xrefs":["Orphanet:66629"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"intestinal motility disease","termid":"MONDO:0021189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Goldberg-Shprintzen syndrome","secondary_identifiers":["DOID:0060481","SCTID:717822006","OMIM:609460","UMLS:C1836123","GARD:9849","MEDGEN:332131","MESH:C537279"],"synonyms":[{"name":"GOSHS","type":"exact"},{"name":"Goldberg-Shprintzen megacolon syndrome","type":"exact"},{"name":"Goldberg-Shprintzen syndrome","type":"exact"},{"name":"megacolon-microcephaly syndrome","type":"exact"}],"termid":"MONDO:0012280","xrefs":{"Monarch":{"xref_id":"0012280"}}}


id: PBO:0053035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARGE xylosyl- and glucuronyltransferase 1","termid":"PBO:0053035"}


id: GO:1901311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of gene expression involved in extracellular matrix organization.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of gene expression involved in extracellular matrix organization (obsolete GO:1901311)","synonyms":[{"name":"regulation of expression of extracellular matrix proteins","type":"exact"},{"name":"regulation of extracellular matrix protein production","type":"related"}],"termid":"GO:1901311"}


id: MONDO:0014972
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 19q13.11 deletion syndrome in which the proximal region was deleted.","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 19q13.11 deletion syndrome","termid":"MONDO:0013090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19q13.11 deletion syndrome, proximal","secondary_identifiers":["MEDGEN:935013","OMIM:617219","UMLS:C4311046"],"termid":"MONDO:0014972","xrefs":{"Monarch":{"xref_id":"0014972"}}}


id: GO:0009575
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space enclosed by the double membrane of a chromoplast but excluding the photosynthetic material.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid stroma","termid":"GO:0009532"},{"relation_name":"part_of","term_name":"chromoplast","termid":"GO:0009509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chromoplast stroma","termid":"GO:0009575"}


id: MONDO:0007651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"gastrocutaneous syndrome","secondary_identifiers":["Orphanet:2069","GARD:2438","UMLS:C1850899","icd11.foundation:1431211717","MESH:C535651","OMIM:137270","MEDGEN:338154"],"synonyms":[{"name":"gastrocutaneous syndrome","type":"exact"},{"name":"peptic Ulcer/hiatal hernia, multiple lentigines/cafe-Au-lait Spots, hypertelorism, myopia","type":"related"}],"termid":"MONDO:0007651","xrefs":{"Monarch":{"xref_id":"0007651"}}}


id: GO:0032435
data:
  {"annotated_genes":["SJAG_00475","SJAG_00052","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89880,106438],"is_not":false,"summary":null,"term":"GO:0032435"},{"annotations":[101863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0032434"},{"relation_name":"is_a","term_name":"negative regulation of proteasomal protein catabolic process","termid":"GO:1901799"},{"relation_name":"is_a","term_name":"negative regulation of ubiquitin-dependent protein catabolic process","termid":"GO:2000059"},{"relation_name":"negatively_regulates","term_name":"proteasome-mediated ubiquitin-dependent protein catabolic process","termid":"GO:0043161"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00475":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"negatively_regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"negative regulation of proteasomal ubiquitin-dependent protein catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"down-regulation of proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"downregulation of proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"inhibition of proteasomal ubiquitin-dependent protein catabolic process","type":"narrow"}],"termid":"GO:0032435","terms_by_termid":{"GO:0032435":null,"GO:1905785":null}}


id: PBO:0031435
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K14_acetylation","termid":"PBO:0031435"}


id: PBO:0085450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Possible chaperone and cysteine protease; required for transcriptional reprogramming during the diauxic shift and for survival in stationary phase; similar to E. coli Hsp31 and S. cerevisiae Hsp31p, Hsp32p, and Sno4p; member of the DJ-1/ThiJ/PfpI superfamily, which includes human DJ-1 involved in Parkinson's disease and cancer","termid":"PBO:0085450"}


id: PBO:0012537
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_results_in_maturation_of","termid":"PBO:0012537"}


id: PBO:0082753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat; COPII coat is required for cargo selection during vesicle formation in ER to Golgi transport; scaffolding function of Lst1p required to generate vesicles that can accommodate difficult cargo proteins that include large oligomeric assemblies and asymmetrically distributed membrane proteins; with Atg40p acts in autophagy of the ER; homologous to Sec24p and Sfb2p","termid":"PBO:0082753"}


id: MONDO:0009284
data:
  {"annotated_genes":["SJAG_01351"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85700],"is_not":false,"summary":null,"term":"MONDO:0009284"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited glutathione synthetase deficiency","termid":"MONDO:0017909"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01351":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019241"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005046","MONDO:0019241"],"is_obsolete":false,"name":"glutathione synthetase deficiency without 5-oxoprolinuria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17331","OMIM:231900","icd11.foundation:178842925","Orphanet:289849","DOID:0112252","MEDGEN:343541","UMLS:C1856399","MESH:C565545"],"synonyms":[{"name":"GSSDE","type":"related"},{"name":"glutathione synthetase deficiency of erythrocytes, hemolytic anaemia due to","type":"related"},{"name":"glutathione synthetase deficiency of erythrocytes, hemolytic anemia due to","type":"related"},{"name":"hemolytic anaemia due to glutathione synthetase deficiency","type":"exact"},{"name":"hemolytic anemia due to glutathione synthetase deficiency","type":"exact"}],"termid":"MONDO:0009284","terms_by_termid":{"MONDO:0009284":null},"xrefs":{"Monarch":{"xref_id":"0009284"}}}


id: MONDO:0019175
data:
  {"annotated_genes":["SJAG_04745","SJAG_02342","SJAG_02923","SJAG_01181","SJAG_02648","SJAG_00993","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007918"},{"annotations":[85816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011257"},{"annotations":[86745,86746,86747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008104"},{"annotations":[85264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033669"},{"annotations":[86135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012371"},{"annotations":[85932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013186"}]},"cv_name":"mondo","definition":"A congenital condition that results in swelling in the arms or legs, and can occur during adolescence or adulthood. Loss of motion and pain may also accompany the swelling. Protein-rich lymphatic fluid accumulates in tissues, engorging and enlarging vessels and often causing visible swelling, tenderness, and pain. Left untreated, the affected tissues may continue to swell, and can become hardened or fibrotic and susceptible to infection.","definition_xrefs":["NCIT:C48829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphedema","termid":"MONDO:0019297"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_01181":null,"SJAG_02342":null,"SJAG_02648":null,"SJAG_02923":null,"SJAG_03453":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"primary lymphedema","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1804666","UMLS:C5576443","Orphanet:77240","NANDO:2201031","GARD:18932","icd11.foundation:794588197"],"synonyms":[{"name":"Troncular lymphatic malformation","type":"exact"},{"name":"primary lymphedema","type":"exact"}],"termid":"MONDO:0019175","terms_by_termid":{"MONDO:0007918":null,"MONDO:0008104":null,"MONDO:0011257":null,"MONDO:0012371":null,"MONDO:0013186":null,"MONDO:0033669":null},"xrefs":{"Monarch":{"xref_id":"0019175"}}}


id: PBO:0058523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6068","termid":"PBO:0058523"}


id: MONDO:0016035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome that develops following bilateral adrenalectomy for Cushing syndrome. The signs and symptoms result from the presence of an adenocorticotropin-secreting pituitary gland adenoma, and include enlargement of the sella turcica and pressure on the adjacent structures, and skin hyperpigmentation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functioning pituitary gland adenoma","termid":"MONDO:0003429"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nelson syndrome","secondary_identifiers":["icd11.foundation:1945677910","NORD:1492","Orphanet:199244","NCIT:C84917","MEDGEN:342174","GARD:7170","MESH:C531754","MESH:D009347","SCTID:43019009","UMLS:C1852159","MedDRA:10028913","DOID:4968"],"synonyms":[{"name":"Nelson's syndrome","type":"exact"},{"name":"Ridges-off-the-end syndrome","type":"related"},{"name":"dermal Ridges","type":"related"}],"termid":"MONDO:0016035","xrefs":{"Monarch":{"xref_id":"0016035"}}}


id: GO:0050620
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3Z)-phycocyanobilin + oxidized ferredoxin = biliverdin IXa + reduced ferredoxin.","definition_xrefs":["MetaCyc:1.3.7.5-RXN","EC:1.3.7.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor","termid":"GO:0016636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"phycocyanobilin:ferredoxin oxidoreductase activity","secondary_identifiers":["RHEA:15309"],"synonyms":[{"name":"(3Z)-phycocyanobilin:ferredoxin oxidoreductase activity","type":"related"}],"termid":"GO:0050620"}


id: PR:O74309
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- slm9 gene.","definition_xrefs":["UniProtKB:O74309","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone transcription regulator slm9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15D4.03","synonyms":[{"name":"Spom972h-slm9","type":"exact"}],"termid":"PR:O74309"}


id: MONDO:0024431
data:
  {"annotated_genes":["SJAG_00938","SJAG_05194","SJAG_03785","SJAG_03011","SJAG_03363","SJAG_05213","SJAG_01344"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008822"},{"annotations":[86276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011559"},{"annotations":[86460,86461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030810"},{"annotations":[85365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031040"},{"annotations":[84792,84793,84791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009380"},{"annotations":[86399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011156"},{"annotations":[85031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011214"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_01344":null,"SJAG_03011":null,"SJAG_03363":null,"SJAG_03785":null,"SJAG_05194":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"bilirubin metabolism disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:80006005","MEDGEN:541273","UMLS:C0268305"],"synonyms":[{"name":"disorder of bilirubin metabolism","type":"exact"}],"termid":"MONDO:0024431","terms_by_termid":{"MONDO:0008822":null,"MONDO:0009380":null,"MONDO:0011156":null,"MONDO:0011214":null,"MONDO:0011559":null,"MONDO:0030810":null,"MONDO:0031040":null},"xrefs":{"Monarch":{"xref_id":"0024431"}}}


id: GO:0001864
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a pentraxin, a member of a family of inflammatory proteins with a radially symmetric arrangement of five identical, noncovalently linked chains in a pentagonal array.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin binding","termid":"GO:0001846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"pentraxin binding","termid":"GO:0001864"}


id: PBO:0044914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DGAT2 divergent transcript","termid":"PBO:0044914"}


id: PBO:0034085
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-disposition_of","termid":"PBO:0034085"}


id: PBO:0045735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0045735"}


id: GO:0005137
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-5 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"interleukin-5 receptor binding","synonyms":[{"name":"IL-5","type":"narrow"},{"name":"interleukin-5 receptor ligand","type":"narrow"}],"termid":"GO:0005137"}


id: FYPO:0003178
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the organization and subsequent separation of sister chromatids during the second meiotic nuclear division is normal (i.e. indistinguishable from wild type) during meiosis.","definition_xrefs":["PomBase:mah","GO:0045144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic chromosome segregation","termid":"FYPO:0003176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic sister chromatid segregation","synonyms":[{"name":"normal chromosome disjunction at meiosis II","type":"exact"},{"name":"normal sister chromatid segregation during meiosis","type":"exact"}],"termid":"FYPO:0003178"}


id: MONDO:0020191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete eyebrow/eyelashes pigmentation anomaly (obsolete MONDO:0020191)","secondary_identifiers":["Orphanet:98601"],"termid":"MONDO:0020191","xrefs":{"Monarch":{"xref_id":"0020191"}}}


id: PBO:0056916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MINDY lysine 48 deubiquitinase 2","termid":"PBO:0056916"}


id: PBO:0085691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in regulation of phospholipid metabolism; one of 6 proteins (Ist2p, Scs2p, Scs22p, Tcb1p, Tcb2p, Tcb3p) that connect the ER and plasma membrane (PM); regulates PM PI4P levels by controlling access of the Sac1p phosphatase to its substrate, PI4P; human VAP homolog; similar to D. melanogaster inturned protein; SWAT-GFP and mCherry fusion proteins localize to the cytosol; SCS22 has a paralog, SCS2, that arose from the whole genome duplication","termid":"PBO:0085691"}


id: MONDO:0001525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland disorder","termid":"MONDO:0003240"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyrocalcitonin secretion disease","secondary_identifiers":["MEDGEN:675237","DOID:12424","SCTID:190303007","UMLS:C0701822","ICD9:246.0"],"synonyms":[{"name":"disorder of thyrocalcitonin secretion","type":"exact"}],"termid":"MONDO:0001525","xrefs":{"Monarch":{"xref_id":"0001525"}}}


id: PBO:0058058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4279","termid":"PBO:0058058"}


id: GO:0061286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the mesonephric capsule are generated and organized. The mesonephric capsule is the tough fibrous layer surrounding the mesonephros, covered in a thick layer of perinephric adipose tissue. It provides some protection from trauma and damage.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal capsule morphogenesis","termid":"GO:0072128"},{"relation_name":"part_of","term_name":"mesonephric capsule development","termid":"GO:0061285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric capsule morphogenesis","termid":"GO:0061286"}


id: PBO:0040103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aristaless related homeobox","termid":"PBO:0040103"}


id: GO:0045515
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-18 receptor.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"interleukin-18 receptor binding","synonyms":[{"name":"IL-18","type":"narrow"},{"name":"interleukin-18 receptor ligand","type":"narrow"}],"termid":"GO:0045515"}


id: PR:O74764
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DDX55 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR24031:SF26","OMA:SCHPO03226","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent rRNA helicase spb4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC24C6.02","secondary_identifiers":["UniProtKB:O74764"],"synonyms":[{"name":"Spom972h-DDX55","type":"exact"}],"termid":"PR:O74764"}


id: PBO:0079409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 8 class VIII pseudogene 3","termid":"PBO:0079409"}


id: MONDO:0008192
data:
  {"annotated_genes":["SJAG_02398"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85333],"is_not":false,"summary":null,"term":"MONDO:0008192"}]},"cv_name":"mondo","definition":"Any paraganglioma in which the cause of the disease is a mutation in the SDHD gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paraganglioma","termid":"MONDO:0000448"},{"relation_name":"is_a","term_name":"hereditary pheochromocytoma-paraganglioma","termid":"MONDO:0017366"},{"relation_name":"is_a","term_name":"adrenal gland neoplasm","termid":"MONDO:0021227"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02398":null},"genotype_count":0,"is_obsolete":false,"name":"paragangliomas 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:168000","GARD:7324","UMLS:C3494181","MEDGEN:488134"],"synonyms":[{"name":"PGL1","type":"related"},{"name":"Paragangliomata","type":"related"},{"name":"SDHD paraganglioma","type":"exact"},{"name":"carotid body tumors","type":"related"},{"name":"carotid body tumours","type":"related"},{"name":"chemodectomas","type":"related"},{"name":"glomus jugulare tumors","type":"related"},{"name":"glomus jugulare tumours","type":"related"},{"name":"glomus tumors, familial, 1","type":"related"},{"name":"paraganglioma caused by mutation in SDHD","type":"exact"},{"name":"paraganglioma, carotid body","type":"related"},{"name":"paragangliomas 1","type":"exact"},{"name":"paragangliomas 1, with or without deafness","type":"exact"},{"name":"paragangliomas type 1","type":"exact"},{"name":"paragangliomas with sensorineural hearing loss","type":"related"},{"name":"paragangliomas, familial nonchromaffin, 1","type":"related"},{"name":"paragangliomas, familial, 1","type":"related"}],"termid":"MONDO:0008192","terms_by_termid":{"MONDO:0008192":null},"xrefs":{"Monarch":{"xref_id":"0008192"}}}


id: GO:0018851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-pinene oxide = (Z)-2-methyl-5-isopropylhexa-2,5-dienal.","definition_xrefs":["EC:5.5.1.10","RHEA:16693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"alpha-pinene-oxide decyclase activity","secondary_identifiers":["UM-BBD_reactionID:r0743","MetaCyc:ALPHA-PINENE-OXIDE-DECYCLASE-RXN","KEGG_REACTION:R04040"],"synonyms":[{"name":"alpha-pinene oxide lyase activity","type":"exact"},{"name":"alpha-pinene-oxide lyase (decyclizing)","type":"related"}],"termid":"GO:0018851"}


id: PBO:0085308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatase with a broad substrate specificity; has some similarity to GPM1/YKL152C, a phosphoglycerate mutase; YOR283W is not an essential gene","termid":"PBO:0085308"}


id: MONDO:0012342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"7q11.23 microduplication syndrome is a rare chromosomal anomaly syndrome resulting from the partial duplication of the long arm of chromosome 7 characterized by a highly variable phenotype that typically manifests with mild-moderate intellectual delay (patients could be in the normal range), speech disorders (particularly of expressive language), and distinctive craniofacial features (brachycephaly, broad forehead, straight eyebows, broad nasal tip, short piltrum, thin upper lip and facial asymmetry). hypotonia, developmental coordination disordes, behavioral problems (such as anxiety, ADHD and oppositional disorders) and various congenital anomalies, such as heart defects, diaphragmatic hernia, renal malformations and cryptorchidism, are frequently presented. Neurological abnormalities (visible on MRI) have been reported.","definition_xrefs":["Orphanet:96121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 7","termid":"MONDO:0016958"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"7q11.23 microduplication syndrome","secondary_identifiers":["DECIPHER:43","DOID:0080926","GARD:12076","OMIM:609757","MESH:C565723","UMLS:C1857844","MEDGEN:347562","SCTID:726707004"],"synonyms":[{"name":"7q11.23 duplication syndrome","type":"related"},{"name":"Somerville-Van Der Aa syndrome","type":"related"},{"name":"Wbs Duplication syndrome","type":"related"},{"name":"Wbs triplication syndrome","type":"related"},{"name":"Williams-Beuren region DUPLICATION syndrome","type":"related"},{"name":"chromosome 7Q11.23 Duplication syndrome","type":"related"},{"name":"chromosome 7Q11.23 triplication syndrome","type":"related"},{"name":"dup(7)(q11.23)","type":"exact"},{"name":"trisomy 7q11.23","type":"exact"}],"termid":"MONDO:0012342","xrefs":{"Monarch":{"xref_id":"0012342"}}}


id: MONDO:0001707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sarcoidosis affecting the tissues of the heart.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-familial restrictive cardiomyopathy","termid":"MONDO:0016345"},{"relation_name":"is_a","term_name":"sarcoidosis","termid":"MONDO:0019338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiac sarcoidosis","secondary_identifiers":["NCIT:C35589","SCTID:75403004","UMLS:C0392077","MEDGEN:140260","DOID:13405"],"synonyms":[{"name":"heart sarcoidosis","type":"exact"},{"name":"sarcoidosis of heart","type":"exact"}],"termid":"MONDO:0001707","xrefs":{"Monarch":{"xref_id":"0001707"}}}


id: PR:O94709
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdx1 gene.","definition_xrefs":["UniProtKB:O94709","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase protein X component, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.09c","synonyms":[{"name":"Spom972h-pdx1","type":"exact"},{"name":"dihydrolipoamide dehydrogenase-binding protein of pyruvate dehydrogenase complex (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94709"}


id: PBO:0002185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Phenylalanine","termid":"PBO:0002185"}


id: RO:0002406
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p directly activates q if and only if p is immediately upstream of q and p is the realization of a function to increase the rate or activity of q","direct_ancestors":[{"relation_name":"is_a","term_name":"directly_positively_regulates","termid":"RO:0002629"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_activates","termid":"RO:0002406"}


id: GO:0033689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of osteoblast proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of osteoblast proliferation","termid":"GO:0033688"},{"relation_name":"negatively_regulates","term_name":"osteoblast proliferation","termid":"GO:0033687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of osteoblast proliferation","synonyms":[{"name":"down regulation of osteoblast proliferation","type":"exact"},{"name":"down-regulation of osteoblast proliferation","type":"exact"},{"name":"downregulation of osteoblast proliferation","type":"exact"},{"name":"inhibition of osteoblast proliferation","type":"narrow"}],"termid":"GO:0033689"}


id: PBO:0049520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.L variant histone 1Q","termid":"PBO:0049520"}


id: MONDO:0007323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chondronectin","secondary_identifiers":["OMIM:118670","UMLS:C3887693","MEDGEN:854532"],"synonyms":[{"name":"Chondronectin","type":"exact"}],"termid":"MONDO:0007323","xrefs":{"Monarch":{"xref_id":"0007323"}}}


id: PBO:0073309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERPINE1 mRNA binding protein 1 pseudogene 5","termid":"PBO:0073309"}


id: MONDO:0003542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dental pulp disorder","termid":"MONDO:0003394"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dental pulp calcification","secondary_identifiers":["icd11.foundation:1672640309","MEDGEN:41471","SCTID:57602001","DOID:5608","UMLS:C0011401","MESH:D003784","ICD10CM:K04.2"],"synonyms":[{"name":"pulp calcification","type":"exact"},{"name":"pulp calcifications","type":"exact"},{"name":"pulpal calcifications","type":"exact"}],"termid":"MONDO:0003542","xrefs":{"Monarch":{"xref_id":"0003542"}}}


id: PBO:0030642
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_raffinose_carbon_source","termid":"PBO:0030642"}


id: MONDO:0020004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare eye disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare eye disease (obsolete MONDO:0020004)","secondary_identifiers":["Orphanet:97966"],"synonyms":[{"name":"rare eye disease","type":"exact"}],"termid":"MONDO:0020004","xrefs":{"Monarch":{"xref_id":"0020004"}}}


id: PBO:0084263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral ER membrane protein with type-III transmembrane domains; required for maintenance of ER zinc homeostasis; required for post-translational SRP-independent protein translocation into the ER; necessary for efficient targeting of Trm1p tRNA methyltransferase to the inner nuclear membrane; mutations cause defects in cortical ER morphology in both the mother and daughter cells","termid":"PBO:0084263"}


id: PBO:0059750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 24","termid":"PBO:0059750"}


id: MONDO:0008377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the RP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 1","secondary_identifiers":["GARD:9149","ICD10CM:H35.5","MESH:C538365","DOID:0110390","OMIM:180100","UMLS:C0220701","MEDGEN:67395"],"synonyms":[{"name":"RP","type":"related"},{"name":"RP1","type":"exact"},{"name":"RP1 retinitis pigmentosa","type":"exact"},{"name":"retinitis pigmentosa","type":"related"},{"name":"retinitis pigmentosa 1","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in RP1","type":"exact"},{"name":"retinitis pigmentosa type 1","type":"exact"}],"termid":"MONDO:0008377","xrefs":{"Monarch":{"xref_id":"0008377"}}}


id: PBO:0063425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 4D","termid":"PBO:0063425"}


id: PBO:0084525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the conserved GPN-loop GTPase family; has a role in transport of RNA polymerase II to the nucleus; exhibits GTP-dependent binding to PolII; has ATPase activity; involved in sister chromatid cohesion; phosphorylated by the Pcl1p-Pho85p kinase complex; human homolog XAB1 interacts with human RNA polymerase II; protein abundance increases in response to DNA replication stress","termid":"PBO:0084525"}


id: PBO:0108712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RabGEF, implicated in endosomal transport","termid":"PBO:0108712"}


id: PBO:0073171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1L2 adaptor subunit of ERAD E3 ubiquitin ligase","termid":"PBO:0073171"}


id: PBO:0071369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 28","termid":"PBO:0071369"}


id: GO:0090437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a socket cell, a shoot epidermal cell that surrounds a trichome and provides its support.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant epidermal cell differentiation","termid":"GO:0090627"},{"relation_name":"part_of","term_name":"plant epidermis development","termid":"GO:0090558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"socket cell differentiation","termid":"GO:0090437"}


id: PBO:0071953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS5 pseudogene 3","termid":"PBO:0071953"}


id: PBO:0030599
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_substance_in_vacuole","termid":"PBO:0030599"}


id: MONDO:0044343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any degenerative disorder affecting one or more vertebral disks of the cervical spine.","definition_xrefs":["NCIT:C27156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intervertebral disk degenerative disorder","termid":"MONDO:0011385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical disk degenerative disorder","secondary_identifiers":["MEDGEN:96081","EFO:0009537","SCTID:69195002","UMLS:C0410606"],"synonyms":[{"name":"cervical Disc Degeneration","type":"exact"},{"name":"cervical Disc degenerative disease","type":"exact"},{"name":"cervical Disc degenerative disorder","type":"exact"},{"name":"cervical region of vertebral column intervertebral disc degenerative disorder","type":"exact"},{"name":"cervical region of vertebral column intervertebral disk degenerative disorder","type":"exact"},{"name":"degeneration of cervical intervertebral disc","type":"exact"},{"name":"degeneration of cervical intervertebral disk","type":"exact"},{"name":"intervertebral disc degenerative disorder of cervical region of vertebral column","type":"exact"},{"name":"intervertebral disk degenerative disorder of cervical region of vertebral column","type":"exact"}],"termid":"MONDO:0044343","xrefs":{"Monarch":{"xref_id":"0044343"}}}


id: PBO:0029331
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H2A_phosphorylation","termid":"PBO:0029331"}


id: GO:0002580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation of antigen (peptide or polysaccharide) via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation","termid":"GO:0002577"},{"relation_name":"regulates","term_name":"antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","synonyms":[{"name":"regulation of peptide or polysaccharide antigen processing and presentation via MHC class II","type":"exact"}],"termid":"GO:0002580"}


id: MONDO:1012950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alzheimer disease that occurs in white-tufted-ear marmoset due to a mutation in the PSEN1 gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"Alzheimer disease, non-human animal","termid":"MONDO:1011443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alzheimer disease, PSEN1-related, white-tufted-ear marmoset","secondary_identifiers":["OMIA:002493-9483"],"termid":"MONDO:1012950","xrefs":{"Monarch":{"xref_id":"1012950"}}}


id: PBO:0110064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RQT complex subunit Rqt4","termid":"PBO:0110064"}


id: FYECO:0000385
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which fluconazole was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ fluconazole","termid":"FYECO:0000385"}


id: PBO:0069862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1149, pseudogene","termid":"PBO:0069862"}


id: MONDO:0015499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete paralytic facial malformation (obsolete MONDO:0015499)","secondary_identifiers":["Orphanet:156224"],"termid":"MONDO:0015499","xrefs":{"Monarch":{"xref_id":"0015499"}}}


id: PBO:0045417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental pluripotency associated 5 pseudogene 2","termid":"PBO:0045417"}


id: MONDO:0013857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alar cleft, isolated","secondary_identifiers":["OMIM:614687","UMLS:C3553476","MEDGEN:766390"],"synonyms":[{"name":"alar cleft, isolated","type":"exact"}],"termid":"MONDO:0013857","xrefs":{"Monarch":{"xref_id":"0013857"}}}


id: PBO:0064959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 11","termid":"PBO:0064959"}


id: MONDO:0018795
data:
  {"annotated_genes":["SJAG_01852","SJAG_03703","SJAG_02431","SJAG_04509"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85844,85845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015912"},{"annotations":[85392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014757"},{"annotations":[86572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010121"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01852":null,"SJAG_02431":null,"SJAG_03703":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"syndromic constitutional thrombocytopenia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5681257","MEDGEN:1843101","GARD:21967","Orphanet:477794"],"synonyms":[{"name":"syndromic constitutional thrombocytopenia","type":"exact"}],"termid":"MONDO:0018795","terms_by_termid":{"MONDO:0010121":null,"MONDO:0014757":null,"MONDO:0015912":null},"xrefs":{"Monarch":{"xref_id":"0018795"}}}


id: GO:0005337
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide) from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound transmembrane transporter activity","termid":"GO:0015932"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"nucleoside transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-9754929","Reactome:R-HSA-9755035","Reactome:R-HSA-5628807","Reactome:R-HSA-727767","Reactome:R-HSA-109534","Reactome:R-HSA-9755015","Reactome:R-HSA-109527","Reactome:R-HSA-109536","Reactome:R-HSA-109529","Reactome:R-HSA-727740","Reactome:R-HSA-727749","Reactome:R-HSA-727768","Reactome:R-HSA-9751024"],"synonyms":[{"name":"intracellular nucleoside transmembrane transporter activity","type":"narrow"}],"termid":"GO:0005337"}


id: PBO:0047704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMN2 pseudogene 1","termid":"PBO:0047704"}


id: GO:0080103
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-methylthiopropyl-glucosinolate = 4-methylsulfinylpropyl-glucosinolate.","definition_xrefs":["PMID:18799661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4-methylthiopropyl glucosinolate S-oxygenase activity","termid":"GO:0080103"}


id: MONDO:0100006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mast cell activation syndrome where an underlying inflammatory disease is present, often in the form of an IgE-dependent allergy, but there are no KIT-mutated mast cells.","definition_xrefs":["PMID:23409940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mast cell activation syndrome","termid":"MONDO:0100004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"secondary mast cell activation syndrome","secondary_identifiers":["UMLS:C4267895","MEDGEN:1843472"],"synonyms":[{"name":"secondary MACS","type":"exact"}],"termid":"MONDO:0100006","xrefs":{"Monarch":{"xref_id":"0100006"}}}


id: PBO:0029259
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_mitotic_G1/S_phase_transition_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0029259"}


id: PBO:0055735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leiomodin 1","termid":"PBO:0055735"}


id: PBO:0062313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily W member 1 pseudogene","termid":"PBO:0062313"}


id: MONDO:0003681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chondrosarcoma characterized by the presence of myxoid changes.","definition_xrefs":["NCIT:C4303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chondrosarcoma","termid":"MONDO:0008977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"myxoid chondrosarcoma","secondary_identifiers":["MEDGEN:87262","DOID:5861","ICDO:9231/3","ONCOTREE:MYCHS","UMLS:C0334551"],"synonyms":[{"name":"MYCHS","type":"related"},{"name":"myxoid chondrosarcoma","type":"exact"}],"termid":"MONDO:0003681","xrefs":{"Monarch":{"xref_id":"0003681"}}}


id: PBO:0048710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin 2","termid":"PBO:0048710"}


id: PBO:0027420
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_nuclear_mRNA_catabolic_process","termid":"PBO:0027420"}


id: GO:0090200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of release of cytochrome c from mitochondria, the process in which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation.","definition_xrefs":["GOC:mtg_apoptosis","GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of release of cytochrome c from mitochondria","termid":"GO:0090199"},{"relation_name":"positively_regulates","term_name":"release of cytochrome c from mitochondria","termid":"GO:0001836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007005"},{"rel_name":"regulates","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0008150","GO:0007005"],"is_obsolete":false,"name":"positive regulation of release of cytochrome c from mitochondria","termid":"GO:0090200"}


id: GO:0019288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isopentenyl diphosphate by the mevalonate-independent pathway. Isopentenyl diphosphate (IPP) is the fundamental unit in isoprenoid biosynthesis and is biosynthesized from pyruvate and glyceraldehyde 3-phosphate via intermediates, including 1-deoxy-D-xylulose 5-phosphate.","definition_xrefs":["PMID:18948055","GOC:go_curators","MetaCyc:NONMEVIPP-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopentenyl diphosphate biosynthetic process","termid":"GO:0009240"},{"relation_name":"is_a","term_name":"glyceraldehyde-3-phosphate metabolic process","termid":"GO:0019682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway","synonyms":[{"name":"isopentenyl diphosphate anabolism, mevalonate-independent pathway","type":"exact"},{"name":"isopentenyl diphosphate biosynthesis, mevalonate-independent","type":"exact"},{"name":"isopentenyl diphosphate biosynthesis, non-mevalonate pathway","type":"exact"},{"name":"isopentenyl diphosphate biosynthetic process via 1-deoxy-D-xylulose 5-phosphate","type":"exact"},{"name":"isopentenyl diphosphate biosynthetic process, MEP pathway","type":"exact"},{"name":"isopentenyl diphosphate biosynthetic process, mevalonate-independent","type":"exact"},{"name":"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway","type":"exact"},{"name":"isopentenyl diphosphate biosynthetic process, non-mevalonate pathway","type":"exact"},{"name":"isopentenyl diphosphate formation, mevalonate-independent pathway","type":"exact"},{"name":"isopentenyl diphosphate synthesis, mevalonate-independent pathway","type":"exact"},{"name":"mevalonate-independent isopentenyl diphosphate biosynthesis","type":"exact"},{"name":"mevalonate-independent isopentenyl diphosphate biosynthetic process","type":"exact"},{"name":"non-MVA pathway","type":"exact"}],"termid":"GO:0019288"}


id: MONDO:0020015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare form of cardiovascular disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare circulatory system disease (obsolete MONDO:0020015)","secondary_identifiers":["Orphanet:98028"],"synonyms":[{"name":"rare cardiovascular disease","type":"exact"}],"termid":"MONDO:0020015","xrefs":{"Monarch":{"xref_id":"0020015"}}}


id: FYPO:0002407
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are viable and curved along the long axis, and the cell diameter is larger than normal and the cell length is shorter than normal, in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable curved stubby vegetative cell population (obsolete FYPO:0002407)","synonyms":[{"name":"curved stubby viable vegetative cell population","type":"exact"}],"termid":"FYPO:0002407"}


id: MONDO:0007742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine oxygenase regulator","secondary_identifiers":["UMLS:C3887951","MEDGEN:854659","OMIM:143460"],"synonyms":[{"name":"5-HYDROXYTRYPTAMINE oxygenase regulator","type":"related"},{"name":"5-hydroxytryptamine oxygenase regulator","type":"exact"},{"name":"HTOR","type":"related"}],"termid":"MONDO:0007742","xrefs":{"Monarch":{"xref_id":"0007742"}}}


id: PBO:0050710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family B (small) member 8","termid":"PBO:0050710"}


id: RO:0001000
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between two distinct material entities, the new entity and the old entity, in which the new entity begins to exist when the old entity ceases to exist, and the new entity inherits the significant portion of the matter of the old entity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"derives_from","termid":"RO:0001000"}


id: MONDO:0005617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually aggressive malignant epithelial neoplasm composed of atypical cells which do not display evidence of glandular, squamous, or transitional cell differentiation.","definition_xrefs":["NCIT:C3692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"undifferentiated carcinoma","secondary_identifiers":["MEDGEN:60010","UMLS:C0205698","ICDO:8021/3","EFO:0006772","ICDO:8020/3"],"synonyms":[{"name":"anaplastic carcinoma","type":"exact"},{"name":"carcinoma, undifferentiated","type":"exact"},{"name":"carcinoma, undifferentiated, malignant","type":"exact"},{"name":"undifferentiated carcinoma","type":"exact"}],"termid":"MONDO:0005617","xrefs":{"Monarch":{"xref_id":"0005617"}}}


id: PBO:0083149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps ORF PEA2/YER149C","termid":"PBO:0083149"}


id: MONDO:0016614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive metabolic cerebellar ataxia","termid":"MONDO:0020044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive ataxia due to PEX10 deficiency","secondary_identifiers":["MEDGEN:1843173","UMLS:C5679614","Orphanet:247815","GARD:20666"],"synonyms":[{"name":"mild peroxismal disorder due to PEX10 deficiency","type":"exact"}],"termid":"MONDO:0016614","xrefs":{"Monarch":{"xref_id":"0016614"}}}


id: PBO:0044686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDN and PRKAG1 antisense RNA 1","termid":"PBO:0044686"}


id: GO:0030989
data:
  {"annotated_genes":["SJAG_01863","SJAG_00113","SJAG_04143","SJAG_00368","SJAG_01370","SJAG_00397","SJAG_02737","SJAG_05185","SJAG_03673","SJAG_00140","SJAG_03073","SJAG_02286","SJAG_04001","SJAG_01662","SJAG_02561","SJAG_02045"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87232,90476,90869,91327,94690,97068,100225,100928,102465,102758,110540,110715,110893,113439,116438],"is_not":false,"summary":null,"term":"GO:0030989"},{"annotations":[110717,106079,100929],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032118"}]},"cv_name":"biological_process","definition":"Oscillatory movement of the nucleus involved in meiosis I. This oscillatory movement is led by an astral microtubule array emanating from the spindle pole body, and driven by the microtubule motor cytoplasmic dynein.","definition_xrefs":["PMID:16111942","GOC:vw","PMID:9572142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear migration along microtubule","termid":"GO:0030473"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiosis I","termid":"GO:0007127"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_01370":null,"SJAG_01662":null,"SJAG_01863":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02561":null,"SJAG_02737":null,"SJAG_03073":null,"SJAG_03673":null,"SJAG_04001":null,"SJAG_04143":null,"SJAG_05185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0140013","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"dynein-driven meiotic oscillatory nuclear movement","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"HNM","type":"exact"},{"name":"horsetail movement","type":"exact"},{"name":"horsetail nuclear movement","type":"exact"}],"termid":"GO:0030989","terms_by_termid":{"GO:0030989":null,"GO:0032118":null}}


id: PBO:0052227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 5","termid":"PBO:0052227"}


id: MONDO:0000572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe combined immunodeficiency that is the result of a mutation on Chromosome 6 RAG1 gene involving genetic rearrangement of both the T- and B-lymphocyte receptor genes.","definition_xrefs":["DOID:0060011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe combined immunodeficiency","termid":"MONDO:0015974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"recombinase activating gene 1 deficiency","synonyms":[{"name":"recombinase activating gene 1 deficiency","type":"exact"}],"termid":"MONDO:0000572","xrefs":{"Monarch":{"xref_id":"0000572"}}}


id: PBO:0060519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NARF antisense RNA 1","termid":"PBO:0060519"}


id: PBO:0000361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rad32 nuclease","termid":"PBO:0000361"}


id: PBO:0034614
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_vegetative_cell_with_normal_cell_length","termid":"PBO:0034614"}


id: PBO:0070781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 11","termid":"PBO:0070781"}


id: GO:1905702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of inhibitory synapse assembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:27779093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse assembly","termid":"GO:0051963"},{"relation_name":"regulates","term_name":"inhibitory synapse assembly","termid":"GO:1904862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of inhibitory synapse assembly","synonyms":[{"name":"regulation of inhibitory synapse formation","type":"exact"}],"termid":"GO:1905702"}


id: PATO:0001368
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape quality inhering in a bearer by virtue of the bearer's having an irregularly toothed edge.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serration","termid":"PATO:0001976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erose","synonyms":[{"name":"jagged","type":"related"}],"termid":"PATO:0001368"}


id: MONDO:0044238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lunulae of fingernails (obsolete MONDO:0044238)","secondary_identifiers":["OMIM:152600"],"synonyms":[{"name":"lunulae of fingernails","type":"related"}],"termid":"MONDO:0044238","xrefs":{"Monarch":{"xref_id":"0044238"}}}


id: PBO:0063480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase like, testis expressed","termid":"PBO:0063480"}


id: GO:0060290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The conversion of a differentiated cell of one fate into a differentiated cell of another fate without first undergoing cell division or reversion to a more primitive or stem cell-like fate.","definition_xrefs":["GOC:kmv","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transdifferentiation","secondary_identifiers":["Wikipedia:Transdifferentiation"],"termid":"GO:0060290"}


id: FYPO:0005146
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a proteasome to the nuclear periphery is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal proteasome localization to nuclear periphery","synonyms":[{"name":"normal proteasome localisation to nuclear periphery","type":"exact"},{"name":"normal proteasome localization to nuclear periphery during mitotic cell cycle","type":"related"},{"name":"normal proteasome localization to nuclear periphery during vegetative growth","type":"exact"}],"termid":"FYPO:0005146"}


id: PBO:0077830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 target 5","termid":"PBO:0077830"}


id: MONDO:1011751
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrochordonous plaque, non-human animal","secondary_identifiers":["OMIA:001370"],"termid":"MONDO:1011751","xrefs":{"Monarch":{"xref_id":"1011751"}}}


id: GO:0048215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Golgi vesicle fusion to target membrane.","definition_xrefs":["ISBN:0716731363","GOC:jid","PMID:10219233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vesicle fusion","termid":"GO:0031340"},{"relation_name":"is_a","term_name":"regulation of Golgi vesicle fusion to target membrane","termid":"GO:0048214"},{"relation_name":"positively_regulates","term_name":"Golgi vesicle fusion to target membrane","termid":"GO:0048210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"positive regulation of Golgi vesicle fusion to target membrane","synonyms":[{"name":"activation of Golgi vesicle fusion to target membrane","type":"narrow"},{"name":"stimulation of Golgi vesicle fusion to target membrane","type":"narrow"},{"name":"up regulation of Golgi vesicle fusion to target membrane","type":"exact"},{"name":"up-regulation of Golgi vesicle fusion to target membrane","type":"exact"},{"name":"upregulation of Golgi vesicle fusion to target membrane","type":"exact"}],"termid":"GO:0048215"}


id: GO:0051477
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a mannosylglycerate from one side of a membrane to the other.","definition_xrefs":["GOC:ai","PMID:15034926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"mannosylglycerate transmembrane transporter activity","termid":"GO:0051477"}


id: GO:0047631
data:
  {"annotated_genes":["SJAG_03977"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112809],"is_not":false,"summary":null,"term":"GO:0047631"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP-ribose + H2O = AMP + D-ribose 5-phosphate.","definition_xrefs":["EC:3.6.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03977":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"ADP-ribose diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2393939","RHEA:10412","MetaCyc:RXN0-1441","Reactome:R-HSA-2393954","Reactome:R-HSA-5696049"],"synonyms":[{"name":"ADP-ribose phosphohydrolase activity","type":"exact"},{"name":"ADP-ribose pyrophosphatase activity","type":"exact"},{"name":"ADP-ribose ribophosphohydrolase activity","type":"related"},{"name":"ADPR-PPase activity","type":"exact"},{"name":"ADPribose diphosphatase activity","type":"related"},{"name":"ADPribose pyrophosphatase activity","type":"related"},{"name":"adenosine diphosphoribose pyrophosphatase activity","type":"exact"}],"termid":"GO:0047631","terms_by_termid":{"GO:0047631":null}}


id: PBO:0050526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haptoglobin","termid":"PBO:0050526"}


id: GO:1902984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any pre-replicative complex assembly involved in meiotic cell cycle DNA replication.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-replicative complex assembly involved in nuclear cell cycle DNA replication","termid":"GO:0006267"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"premeiotic DNA replication","termid":"GO:0006279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0006260","GO:0006259","GO:0065003","GO:0044085","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"pre-replicative complex assembly involved in premeiotic DNA replication","synonyms":[{"name":"nuclear pre-replicative complex assembly involved in meiotic cell cycle","type":"exact"},{"name":"pre-RC complex assembly involved in meiosis","type":"broad"},{"name":"pre-replicative complex assembly involved in meiosis","type":"broad"},{"name":"pre-replicative complex assembly involved in meiotic cell cycle DNA replication","type":"exact"},{"name":"pre-replicative complex formation involved in meiosis","type":"broad"}],"termid":"GO:1902984"}


id: GO:0000724
data:
  {"annotated_genes":["SJAG_02348","SJAG_03926","SJAG_01677","SJAG_00213","SJAG_02079","SJAG_00935","SJAG_04183","SJAG_00796","SJAG_03160","SJAG_00327","SJAG_01624","SJAG_01776","SJAG_03454","SJAG_04210","SJAG_03722","SJAG_01205","SJAG_00857","SJAG_02339","SJAG_03026","SJAG_00823","SJAG_01410","SJAG_01708","SJAG_03436","SJAG_00757","SJAG_04932","SJAG_01698","SJAG_04995","SJAG_05180","SJAG_00640","SJAG_02690","SJAG_02575","SJAG_01832","SJAG_03221","SJAG_02708","SJAG_00696","SJAG_00805","SJAG_02294","SJAG_01652","SJAG_02465","SJAG_02556","SJAG_02262","SJAG_00475","SJAG_03994","SJAG_02267","SJAG_00153","SJAG_05232","SJAG_02545","SJAG_05105","SJAG_03702","SJAG_03898","SJAG_05323","SJAG_01332","SJAG_00177","SJAG_03941","SJAG_05237","SJAG_01354","SJAG_02460","SJAG_01067","SJAG_05373","SJAG_01076","SJAG_00980","SJAG_04971","SJAG_00884","SJAG_02822","SJAG_01762","SJAG_01044","SJAG_01173","SJAG_04530","SJAG_04039","SJAG_03855","SJAG_01573"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70386,87519,87869,88018,88529,88639,89228,89680,90349,92008,92156,92729,94360,95497,95660,95793,96172,96406,96586,98560,98805,98875,100107,100668,101694,102695,103367,103654,105229,105794,105915,106437,106894,107151,107238,108569,109792,110981,111040,111219,115021,115750,116294,116597,116737,117088,117220,117363,118257],"is_not":false,"summary":null,"term":"GO:0000724"},{"annotations":[95659,98556,100041,101693,92154,107147,109789],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000730"},{"annotations":[112978,114774,111524,98921,106735,91445,89924,111392,114603,109713,105914,116596,98781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000727"},{"annotations":[116943,92131,100142,88768,107634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045003"},{"annotations":[96407],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000707"},{"annotations":[107152,109795],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010772"},{"annotations":[100143],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902346"},{"annotations":[108807],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010569"},{"annotations":[74741,95731,116366,89529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990414"}]},"cv_name":"biological_process","definition":"The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule.","definition_xrefs":["PMID:10357855","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recombinational repair","termid":"GO:0000725"},{"relation_name":"is_a","term_name":"double-strand break repair","termid":"GO:0006302"}],"gene_count":71,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00177":null,"SJAG_00213":null,"SJAG_00327":null,"SJAG_00475":null,"SJAG_00640":null,"SJAG_00696":null,"SJAG_00757":null,"SJAG_00796":null,"SJAG_00805":null,"SJAG_00823":null,"SJAG_00857":null,"SJAG_00884":null,"SJAG_00935":null,"SJAG_00980":null,"SJAG_01044":null,"SJAG_01067":null,"SJAG_01076":null,"SJAG_01173":null,"SJAG_01205":null,"SJAG_01332":null,"SJAG_01354":null,"SJAG_01410":null,"SJAG_01573":null,"SJAG_01624":null,"SJAG_01652":null,"SJAG_01677":null,"SJAG_01698":null,"SJAG_01708":null,"SJAG_01762":null,"SJAG_01776":null,"SJAG_01832":null,"SJAG_02079":null,"SJAG_02262":null,"SJAG_02267":null,"SJAG_02294":null,"SJAG_02339":null,"SJAG_02348":null,"SJAG_02460":null,"SJAG_02465":null,"SJAG_02545":null,"SJAG_02556":null,"SJAG_02575":null,"SJAG_02690":null,"SJAG_02708":null,"SJAG_02822":null,"SJAG_03026":null,"SJAG_03160":null,"SJAG_03221":null,"SJAG_03436":null,"SJAG_03454":null,"SJAG_03702":null,"SJAG_03722":null,"SJAG_03855":null,"SJAG_03898":null,"SJAG_03926":null,"SJAG_03941":null,"SJAG_03994":null,"SJAG_04039":null,"SJAG_04183":null,"SJAG_04210":null,"SJAG_04530":null,"SJAG_04932":null,"SJAG_04971":null,"SJAG_04995":null,"SJAG_05105":null,"SJAG_05180":null,"SJAG_05232":null,"SJAG_05237":null,"SJAG_05323":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006310","GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"double-strand break repair via homologous recombination","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5693538","GO:0016924"],"synonyms":[{"name":"HDR","type":"exact"},{"name":"HRR","type":"exact"},{"name":"Rad51-dependent recombinational repair","type":"exact"},{"name":"Rhp51-dependent recombinational repair","type":"exact"},{"name":"homologous recombinational repair","type":"exact"},{"name":"homology-directed repair","type":"exact"}],"termid":"GO:0000724","terms_by_termid":{"GO:0000707":null,"GO:0000724":null,"GO:0000727":null,"GO:0000730":null,"GO:0010569":null,"GO:0010772":null,"GO:0045003":null,"GO:1902346":null,"GO:1990414":null}}


id: MONDO:0019572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive cutis laxa, type 1 (ARCL1) is a generalized connective tissue disorder characterized by the association of wrinkled, redundant and sagging inelastic skin with severe systemic manifestations (lung atelectesias and emphysema, vascular anomalies, and gastrointestinal and genitourinary tract diverticuli).","definition_xrefs":["Orphanet:90349"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"vascular disorder","termid":"MONDO:0005385"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited cutis laxa","termid":"MONDO:0100237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive cutis laxa type 1","secondary_identifiers":["PMID:19401719","UMLS:C0268351","GARD:8480","DOID:0070144","MEDGEN:78663","SCTID:254222002","MESH:C536225"],"synonyms":[{"name":"ARCL1","type":"exact"},{"name":"autosomal recessive cutis laxa type 1","type":"exact"},{"name":"autosomal recessive cutis laxa type I","type":"related"},{"name":"autosomal recessive cutis laxa with severe systemic involvement","type":"exact"},{"name":"autosomal recessive cutis laxa, pulmonary emphysema type","type":"exact"},{"name":"cutis laxa, autosomal recessive type 1","type":"related"},{"name":"cutis laxa, type 1","type":"related"}],"termid":"MONDO:0019572","xrefs":{"Monarch":{"xref_id":"0019572"}}}


id: GO:0033512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-lysine into other compounds, including acetyl-CoA, via the intermediate saccharopine.","definition_xrefs":["GOC:mah","MetaCyc:LYSINE-DEG1-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine catabolic process to acetyl-CoA","termid":"GO:0019474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150","GO:0055086","GO:0006790","GO:0006520"],"is_obsolete":false,"name":"L-lysine catabolic process to acetyl-CoA via saccharopine","synonyms":[{"name":"L-lysine breakdown to acetyl-CoA via saccharopine","type":"exact"},{"name":"L-lysine degradation to acetyl-CoA via saccharopine","type":"exact"}],"termid":"GO:0033512"}


id: GO:0004918
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-8 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-X-C chemokine receptor activity","termid":"GO:0016494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-8 receptor activity","synonyms":[{"name":"IL-8 receptor activity","type":"exact"},{"name":"IL-8R","type":"exact"}],"termid":"GO:0004918"}


id: FYPO:0004937
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is lower than normal during the first meiotic nuclear division. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during meiosis","termid":"FYPO:0002959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during meiosis I","synonyms":[{"name":"decreased RNA accumulation during meiosis I","type":"related"},{"name":"decreased RNA level during first meiotic nuclear division","type":"exact"},{"name":"decreased transcript level during meiosis I","type":"exact"},{"name":"reduced RNA level during meiosis I","type":"exact"}],"termid":"FYPO:0004937"}


id: GO:0014802
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of sarcoplasmic reticulum devoted to calcium ion storage and calcium ion release.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum subcompartment","termid":"GO:0098827"},{"relation_name":"part_of","term_name":"sarcoplasmic reticulum","termid":"GO:0016529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005737","GO:0005783","GO:0005575"],"is_obsolete":false,"name":"terminal cisterna","secondary_identifiers":["Wikipedia:Terminal_cisterna"],"termid":"GO:0014802"}


id: PR:O74918
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exosome complex component RRP45 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11097:SF8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome complex component rrp45 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.08","secondary_identifiers":["UniProtKB:O74918"],"synonyms":[{"name":"SPCC757.08","type":"related"},{"name":"Spom972h-EXOSC9","type":"exact"},{"name":"ribosomal RNA-processing protein 45 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74918"}


id: GO:2000980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of inner ear receptor cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mechanoreceptor differentiation","termid":"GO:0045631"},{"relation_name":"regulates","term_name":"inner ear receptor cell differentiation","termid":"GO:0060113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of inner ear receptor cell differentiation","synonyms":[{"name":"regulation of inner ear hair cell differentiation","type":"exact"}],"termid":"GO:2000980"}


id: PBO:0110456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional corepressor for ribosomal proteins via TOR signaling pathway Ifh1","termid":"PBO:0110456"}


id: PBO:0078092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex 2 pseudogene 9","termid":"PBO:0078092"}


id: GO:1903179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dopamine biosynthetic process.","definition_xrefs":["GOC:bf","GO_REF:0000058","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of dopamine metabolic process","termid":"GO:0042053"},{"relation_name":"regulates","term_name":"dopamine biosynthetic process","termid":"GO:0042416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dopamine biosynthetic process","synonyms":[{"name":"regulation of dopamine anabolism","type":"exact"},{"name":"regulation of dopamine biosynthesis","type":"exact"},{"name":"regulation of dopamine formation","type":"exact"},{"name":"regulation of dopamine synthesis","type":"exact"}],"termid":"GO:1903179"}


id: MONDO:0012579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pulmonary alveolar proteinosis (PAP) is a rare lung disease characterized by the accumulation of a lipoproteinaceous substance in the distal air spaces which positively stains with periodic acid-Schiff (PAS).","definition_xrefs":["Orphanet:747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary alveolar proteinosis","termid":"MONDO:0001437"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune pulmonary alveolar proteinosis","secondary_identifiers":["OMIM:610910","SCTID:707443007","MEDGEN:410079","MESH:C567049","NANDO:1200747","UMLS:C1970472","GARD:7499","NORD:1633","icd11.foundation:676409940","NANDO:1200748"],"synonyms":[{"name":"APAP","type":"exact"},{"name":"PAP","type":"related"},{"name":"PAP acquired","type":"related"},{"name":"Pap, acquired","type":"related"},{"name":"Pulmonary Alveolar Proteinosis","type":"exact"},{"name":"acquired pulmonary alveolar proteinosis","type":"related"},{"name":"autoimmune PAP","type":"exact"},{"name":"iPAP","type":"exact"},{"name":"idiopathic PAP","type":"exact"},{"name":"idiopathic pulmonary alveolar proteinosis","type":"exact"},{"name":"pulmonary alveolar lipoproteinosis acquired","type":"related"},{"name":"pulmonary alveolar lipoproteinosis, acquired","type":"related"},{"name":"pulmonary alveolar proteinosis acquired","type":"related"},{"name":"pulmonary alveolar proteinosis autoimmune","type":"related"},{"name":"pulmonary alveolar proteinosis, acquired","type":"related"},{"name":"pulmonary alveolar proteinosis, autoimmune","type":"related"}],"termid":"MONDO:0012579","xrefs":{"Monarch":{"xref_id":"0012579"}}}


id: PBO:0031274
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_silencing_at_silent_mating-type_cassette","termid":"PBO:0031274"}


id: GO:0034495
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the protein storage vacuole membrane.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type vacuole lumen","termid":"GO:0000330"},{"relation_name":"part_of","term_name":"protein storage vacuole","termid":"GO:0000326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005773","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"protein storage vacuole lumen","termid":"GO:0034495"}


id: GO:1990461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of iron ion. These include transport of iron away from sensitive areas and to compartments or complexes whose purpose is sequestration of iron ion.","definition_xrefs":["GOC:sart","PMID:23064556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification of inorganic compound","termid":"GO:0061687"},{"relation_name":"part_of","term_name":"response to iron ion","termid":"GO:0010039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"detoxification of iron ion","termid":"GO:1990461"}


id: GO:0033255
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses histone acetyltransferase activity and links histone acetylation to the assembly of transcriptionally silent chromatin. In vitro, the complex acetylates lysine 16 of histone H4 and lysine 14 of histone H3, although the latter may not be relevant in vivo. The complex contains a catalytic subunit and at least two other subunits; in Saccharomyces, the catalytic subunit is Sas2p and additional subunits are Sas4p and Sas5p.","definition_xrefs":["PMID:11731480","PMID:12626510","PMID:15788653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"piccolo histone acetyltransferase complex","termid":"GO:0032777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SAS acetyltransferase complex","synonyms":[{"name":"SAS-I complex","type":"exact"}],"termid":"GO:0033255"}


id: MONDO:0044701
data:
  {"annotated_genes":["SJAG_01712"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84753],"is_not":false,"summary":null,"term":"MONDO:0044701"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01712":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0020022","MONDO:0002320"],"is_obsolete":false,"name":"childhood-onset motor and cognitive regression syndrome with extrapyramidal movement disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:13658","MEDGEN:1626007","OMIM:617672","Orphanet:500180","DOID:0070474","UMLS:C4540086"],"synonyms":[{"name":"CONDBA","type":"related"},{"name":"UBTF-related disorder","type":"exact"},{"name":"neurodegeneration, childhood-onset, with brain atrophy","type":"related"}],"termid":"MONDO:0044701","terms_by_termid":{"MONDO:0044701":null},"xrefs":{"Monarch":{"xref_id":"0044701"}}}


id: PBO:0056898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migration and invasion enhancer 1","termid":"PBO:0056898"}


id: SO:1000018
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Change of a pyrimidine nucleotide, C or T, into a purine nucleotide, A or G.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transversion","termid":"SO:1000017"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrimidine_to_purine_transversion","synonyms":[{"name":"pyrimidine to purine transversion","type":"exact"}],"termid":"SO:1000018"}


id: GO:0140622
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Lipid transfer complex that is responsible for the non-vesicular transport of phospholipids, such as phosphatidylserine, from the endoplasmic reticulum to the endosome. It resides in the endosomal (acceptor) membrane and binds to specific lipids on the donor membrane at the ER-endosome contact site.","definition_xrefs":["GOC:lnp","PMID:24366873","PMID:20016005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"endosome membrane","termid":"GO:0010008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0032991","GO:0005768","GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"ER-to-endosome phospholipid transfer complex","termid":"GO:0140622"}


id: GO:0034501
data:
  {"annotated_genes":["SJAG_04259","SJAG_04126","SJAG_02336","SJAG_01297","SJAG_03540","SJAG_03327","SJAG_02761"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100833,101297,113281],"is_not":false,"summary":null,"term":"GO:0034501"},{"annotations":[99884,103404,107752,118164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"}]},"cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained at, the kinetochore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromosome, centromeric region","termid":"GO:0071459"},{"relation_name":"is_a","term_name":"protein localization to condensed chromosome","termid":"GO:1903083"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01297":null,"SJAG_02336":null,"SJAG_02761":null,"SJAG_03327":null,"SJAG_03540":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"condensin localization to kinetochore","type":"narrow"},{"name":"protein localisation to kinetochore","type":"exact"}],"termid":"GO:0034501","terms_by_termid":{"GO:0034501":null,"GO:0140210":null}}


id: PBO:0000792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic ER membrane protein","termid":"PBO:0000792"}


id: MONDO:0010175
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"van Bogaert-Hozay syndrome","secondary_identifiers":["MEDGEN:341263","MESH:C536526","OMIM:277150","UMLS:C1848598"],"synonyms":[{"name":"A familial form of acro-osteolysis associated with a mild intellectual disability, skin atrophy, facial dysmorphism, and ocular defects","type":"related"},{"name":"A familial form of acro-osteolysis associated with a mild mental retardation, skin atrophy, facial dysmorphism, and ocular defects","type":"related"},{"name":"Hozay's syndrome","type":"related"},{"name":"Hozay’s syndrome","type":"related"},{"name":"acro-osteolysis-facial dysplasia syndrome","type":"related"},{"name":"van Bogaert-Hozay syndrome","type":"exact"}],"termid":"MONDO:0010175","xrefs":{"Monarch":{"xref_id":"0010175"}}}


id: PBO:0067257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 331, pseudogene","termid":"PBO:0067257"}


id: MONDO:0008884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome is characterized by congenital anodontia, a small maxilla, short stature with shortened metacarpals and metatarsals, sparse hair, albinoidism and multiple ocular anomalies. It has been described in three siblings (one brother and two sisters). Transmission is autosomal recessive.","definition_xrefs":["Orphanet:2713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"oculoosteocutaneous syndrome","secondary_identifiers":["GARD:992","MEDGEN:347867","MESH:C565893","OMIM:211370","SCTID:722061006","UMLS:C1859385"],"synonyms":[{"name":"BRACHYMETAPODY-anodontia-hypotrichosis-ALBINOIDISM","type":"exact"},{"name":"anodontia-hypotrichosis syndrome","type":"exact"},{"name":"brachymetapody anodontia hypotrichosis albinoidism","type":"exact"},{"name":"oculoosteocutaneous syndrome","type":"exact"}],"termid":"MONDO:0008884","xrefs":{"Monarch":{"xref_id":"0008884"}}}


id: PBO:0076118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin binding protein 2","termid":"PBO:0076118"}


id: GO:1902396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a bicellular tight junction.","definition_xrefs":["GOC:TermGenie","PMID:18332111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell-cell junction","termid":"GO:0150105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to bicellular tight junction","synonyms":[{"name":"protein localisation in tight junction","type":"exact"},{"name":"protein localisation to tight junction","type":"exact"},{"name":"protein localization in tight junction","type":"exact"}],"termid":"GO:1902396"}


id: PBO:0079156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 15","termid":"PBO:0079156"}


id: PBO:0047351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 4","termid":"PBO:0047351"}


id: PBO:0003886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S9 (predicted)","termid":"PBO:0003886"}


id: PBO:0083440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YOR378W","termid":"PBO:0083440"}


id: PBO:0050478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A6","termid":"PBO:0050478"}


id: GO:0035228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops or reduces the activity of the enzyme glutamate-cysteine ligase.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of glutamate-cysteine ligase activity (obsolete GO:0035228)","synonyms":[{"name":"down regulation of glutamate-cysteine ligase activity","type":"exact"},{"name":"down-regulation of glutamate-cysteine ligase activity","type":"exact"},{"name":"downregulation of glutamate-cysteine ligase activity","type":"exact"},{"name":"inhibition of glutamate-cysteine ligase activity","type":"narrow"}],"termid":"GO:0035228"}


id: MONDO:0004250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenoma that arises from the extrahepatic bile ducts. It is characterized by the presence of a papillary growth pattern.","definition_xrefs":["NCIT:C5849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary adenoma","termid":"MONDO:0002533"},{"relation_name":"is_a","term_name":"extrahepatic bile duct adenoma","termid":"MONDO:0003445"},{"relation_name":"is_a","term_name":"bile duct papillary neoplasm","termid":"MONDO:0003455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"extrahepatic bile duct papillary adenoma","secondary_identifiers":["UMLS:C1333510","DOID:7503","MEDGEN:232483"],"synonyms":[{"name":"extrahepatic bile duct papillary adenoma","type":"exact"},{"name":"papillary adenoma of extrahepatic bile duct","type":"exact"},{"name":"papillary adenoma of the extrahepatic bile duct","type":"exact"}],"termid":"MONDO:0004250","xrefs":{"Monarch":{"xref_id":"0004250"}}}


id: MONDO:0013362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THOC6-related developmental delay-microcephaly-facial dysmorphism syndrome","secondary_identifiers":["Orphanet:363444","MEDGEN:462289","GARD:17558","UMLS:C3150939","OMIM:613680"],"synonyms":[{"name":"BBIS","type":"exact"},{"name":"BEAULIEU-BOYCOTT-Innes syndrome","type":"related"},{"name":"Beaulieu-Boycott-Innes syndrome","type":"exact"},{"name":"microcephaly, intellectual disability, and distinctive facies, with Cardiac and genitourinary malformations","type":"related"},{"name":"microcephaly, mental retardation, and distinctive facies, with Cardiac and genitourinary malformations","type":"related"}],"termid":"MONDO:0013362","xrefs":{"Monarch":{"xref_id":"0013362"}}}


id: PBO:0080744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XIAP associated factor 1","termid":"PBO:0080744"}


id: MONDO:0004707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma in situ involving a anal canal.","definition_xrefs":["MONDO:patterns/carcinoma_in_situ"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectum carcinoma in situ","termid":"MONDO:0004725"},{"relation_name":"is_a","term_name":"anal canal carcinoma","termid":"MONDO:0007108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"anal canal carcinoma in situ","secondary_identifiers":["SCTID:92531006","UMLS:C2242854","ICD9:230.6","DOID:9087","ICD9:230.5","MEDGEN:412201","NCIT:C7794"],"synonyms":[{"name":"anal canal in situ carcinoma","type":"exact"},{"name":"anal carcinoma in situ","type":"related"},{"name":"anal carcinoma stage 0","type":"exact"},{"name":"anal intraepithelial neoplasia grade III","type":"exact"},{"name":"carcinoma in situ of anal canal","type":"exact"},{"name":"carcinoma in situ of anus","type":"exact"},{"name":"stage 0 anal canal cancer","type":"exact"},{"name":"stage 0 anal canal cancer aJCC v6","type":"exact"},{"name":"stage 0 anal canal cancer aJCC v6 and v7","type":"exact"},{"name":"stage 0 anal canal cancer aJCC v7","type":"exact"},{"name":"stage 0 anal canal carcinoma","type":"exact"},{"name":"stage 0 anal canal carcinoma aJCC v6 and v7","type":"exact"},{"name":"stage 0 anal carcinoma aJCC v6 and v7","type":"exact"},{"name":"stage 0 anal carcinoma in situ","type":"exact"}],"termid":"MONDO:0004707","xrefs":{"Monarch":{"xref_id":"0004707"}}}


id: PBO:0046546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group FRD member 3","termid":"PBO:0046546"}


id: PBO:0076215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sad1 and UNC84 domain containing 2","termid":"PBO:0076215"}


id: MONDO:0009690
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital myasthenic syndrome in which the cause of the disease is a mutation in the DOK7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"},{"relation_name":"is_a","term_name":"postsynaptic congenital myasthenic syndrome","termid":"MONDO:0020344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 10","secondary_identifiers":["SCTID:230687001","MEDGEN:376880","UMLS:C1850792","OMIM:254300","DOID:0110668","OMIM:609456","ICD9:358.00","MESH:C563716","GARD:15206","DOID:0110638"],"synonyms":[{"name":"CMS Ib","type":"related"},{"name":"CMS10","type":"exact"},{"name":"CMS1B","type":"related"},{"name":"Cms Ib","type":"related"},{"name":"Cms Ib, formerly","type":"related"},{"name":"DOK7 congenital myasthenic syndrome","type":"exact"},{"name":"LGM","type":"exact"},{"name":"congenital muscular dystrophy merosin-positive","type":"exact"},{"name":"congenital myasthenic syndrome 10","type":"exact"},{"name":"congenital myasthenic syndrome caused by mutation in DOK7","type":"exact"},{"name":"congenital myasthenic syndrome type 10","type":"exact"},{"name":"congenital myasthenic syndrome type IB","type":"related"},{"name":"congenital myasthenic syndrome type IB, formerly","type":"related"},{"name":"familial limb-girdle myasthenia","type":"exact"},{"name":"muscular dystrophy, congenital, merosin-POSITIVE","type":"related"},{"name":"myasthenia, limb-girdle, familial","type":"related"},{"name":"myasthenia, limb-girdle, familial, formerly","type":"related"},{"name":"myasthenic myopathy","type":"related"},{"name":"myasthenic myopathy, formerly","type":"related"},{"name":"myasthenic syndrome, congenital, 10","type":"related"},{"name":"myasthenic syndrome, congenital, type 10","type":"exact"}],"termid":"MONDO:0009690","xrefs":{"Monarch":{"xref_id":"0009690"}}}


id: PBO:0000067
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"identified in S. pombe only","termid":"PBO:0000067"}


id: PBO:0067105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 147, pseudogene","termid":"PBO:0067105"}


id: MONDO:0024466
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated hereditary congenital facial paralysis","termid":"MONDO:0011090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"facial paresis, hereditary congenital, 1","secondary_identifiers":["MEDGEN:371292","UMLS:C1832284","OMIM:601471"],"synonyms":[{"name":"HCFP1","type":"exact"},{"name":"Mobius syndrome 2","type":"related"},{"name":"Mobius syndrome 2, formerly","type":"related"},{"name":"Moebius syndrome 2","type":"related"},{"name":"Moebius syndrome 2, formerly","type":"related"},{"name":"facial palsy, congenital, unilateral or bilateral","type":"related"},{"name":"facial paresis, hereditary congenital, 1","type":"exact"}],"termid":"MONDO:0024466","xrefs":{"Monarch":{"xref_id":"0024466"}}}


id: MONDO:0008101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial supernumerary nipples is a rare breast malformation characterized by the presence, in various members of a single family, of one or more nipple(s) and/or their related tissue, in addition to the normal bilateral chest nipples. The anomaly is usually situated along the embryonic milk line, from axillae to inguinal regions, but other locations are also possible. Association with dental abnormalities, Becker nevus, renal or underlying breast tissue malignancy and genitourinary malformations has been reported.","definition_xrefs":["Orphanet:2456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"supernumerary breasts","termid":"MONDO:0015854"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial supernumerary nipples","secondary_identifiers":["MEDGEN:120564","OMIM:163700","UMLS:C0266011","GARD:2259"],"synonyms":[{"name":"accessory nipples","type":"related"},{"name":"isolated polythelia","type":"exact"},{"name":"nipples, supernumerary","type":"related"},{"name":"polymastia","type":"related"},{"name":"polythelia, familial","type":"related"}],"termid":"MONDO:0008101","xrefs":{"Monarch":{"xref_id":"0008101"}}}


id: PBO:0080130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle associated membrane protein 9, pseudogene","termid":"PBO:0080130"}


id: PBO:0084315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JmjC domain family histone demethylase; promotes global demethylation of H3K4 and repression of noncoding intergenic transcription during sporulation; removes methyl groups added by Set1p; negatively regulated by H3K14 acetylation; protein levels regulated by Not4p polyubiquitin-mediated degradation; regulates sporulation timing by extending period of active transcription; regulates rDNA silencing; human homolog is JARID1C","termid":"PBO:0084315"}


id: SO:0000834
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a mature transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_region","termid":"SO:0000833"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mature_transcript_region","synonyms":[{"name":"mature transcript region","type":"exact"}],"termid":"SO:0000834"}


id: PR:Q9P7S4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- taf4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7S4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23G3.09","synonyms":[{"name":"Spom972h-taf4","type":"exact"},{"name":"TBP-associated factor 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7S4"}


id: MONDO:0008326
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pseudocholinesterase, increase in plasma level of (obsolete MONDO:0008326)","secondary_identifiers":["OMIM:177600"],"synonyms":[{"name":"pseudocholinesterase, increase in plasma level OF","type":"related"}],"termid":"MONDO:0008326","xrefs":{"Monarch":{"xref_id":"0008326"}}}


id: PBO:0055349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2778","termid":"PBO:0055349"}


id: GO:0042851
data:
  {"annotated_genes":["SJAG_04145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042853"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-alanine, the L-enantiomer of 2-aminopropanoic acid, i.e. (2S)-2-aminopropanoic acid.","definition_xrefs":["GOC:jl","GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine metabolic process","termid":"GO:0006522"},{"relation_name":"is_a","term_name":"pyruvate family amino acid metabolic process","termid":"GO:0009078"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-alanine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-alanine metabolism","type":"exact"}],"termid":"GO:0042851","terms_by_termid":{"GO:0042853":null}}


id: PBO:0034662
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_plasma_membrane_to_vacuole_transport","termid":"PBO:0034662"}


id: PBO:0059037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 25","termid":"PBO:0059037"}


id: PBO:0080506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophanyl-tRNA synthetase 1","termid":"PBO:0080506"}


id: GO:0008643
data:
  {"annotated_genes":["SJAG_03820","SJAG_03608","SJAG_04068","SJAG_02958","SJAG_04905","SJAG_03960","SJAG_03606","SJAG_00057"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62430,57774,91971,64320,113664,116702,60573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034219"},{"annotations":[110136,113669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046323"},{"annotations":[116706,113670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098708"},{"annotations":[110137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140425"},{"annotations":[102482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008645"},{"annotations":[95254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106081"},{"annotations":[95256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106082"}]},"cv_name":"biological_process","definition":"The directed movement of carbohydrate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Carbohydrates are a group of organic compounds based of the general formula Cx(H2O)y.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_02958":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03820":null,"SJAG_03960":null,"SJAG_04068":null,"SJAG_04905":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"carbohydrate transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0008644","GO:0006861"],"synonyms":[{"name":"sugar transport","type":"narrow"}],"termid":"GO:0008643","terms_by_termid":{"GO:0008645":null,"GO:0034219":null,"GO:0046323":null,"GO:0098708":null,"GO:0106081":null,"GO:0106082":null,"GO:0140425":null}}


id: GO:0009560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an uncellularized embryo sac nucleus cellularizes and acquires the specialized features of an egg cell. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["GOC:jid","GOC:mtg_sensu","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"female gamete generation","termid":"GO:0007292"},{"relation_name":"part_of","term_name":"megagametogenesis","termid":"GO:0009561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryo sac egg cell differentiation","secondary_identifiers":["GO:0048233"],"synonyms":[{"name":"female gamete generation","type":"broad"},{"name":"female gametophyte egg cell differentiation","type":"exact"}],"termid":"GO:0009560"}


id: PBO:0071164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 3","termid":"PBO:0071164"}


id: PBO:0114320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein, ubiquitin conjugatiing enzyme-like","termid":"PBO:0114320"}


id: PBO:0027243
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_polyadenylated_5S_rRNA_level","termid":"PBO:0027243"}


id: PBO:0017914
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae YPD1","termid":"PBO:0017914"}


id: PBO:0086883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transcription factor containing a WOPR domain; binds DNA in vitro; similar to C. albicans Wor1p transcription factor that regulates white-opaque switching; overexpression causes a cell cycle delay or arrest","termid":"PBO:0086883"}


id: PBO:0013002
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curator_name","termid":"PBO:0013002"}


id: PBO:0000907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Exo84 (predicted)","termid":"PBO:0000907"}


id: FYPO:0005868
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mitotic recombination is increased at ribosomal DNA.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased mitotic recombination","termid":"FYPO:0000473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000293"],"is_obsolete":false,"name":"increased mitotic recombination at rDNA","synonyms":[{"name":"increased mitotic recombination at rDNA during mitotic cell cycle","type":"related"},{"name":"increased mitotic recombination at rDNA during vegetative growth","type":"exact"},{"name":"increased mitotic recombination at ribosomal DNA","type":"exact"}],"termid":"FYPO:0005868"}


id: GO:0005954
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex which in eukaryotes is composed of four different chains: alpha, beta, gamma, and delta. The different isoforms assemble into homo- or heteromultimeric holoenzymes composed of 8 to 12 subunits. Catalyzes the phosphorylation of proteins to O-phosphoproteins.","definition_xrefs":["PMID:20668654"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"calcium- and calmodulin-dependent protein kinase complex","synonyms":[{"name":"CAMK2","type":"exact"},{"name":"CaMKII","type":"related"},{"name":"calcium/calmodulin-dependent protein kinase complex","type":"exact"}],"termid":"GO:0005954"}


id: MONDO:0008152
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic multicentric osteolysis is a very rare syndrome characterized by progressive loss of bone, usually the capsal and tarsal bones, resulting in deformity and disability, as well as chronic renal failure in many cases. The bone and renal disorders are sometimes associated with intellectual deficit and facial abnormalities.","definition_xrefs":["Orphanet:2774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary osteolysis","termid":"MONDO:0019707"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multicentric carpo-tarsal osteolysis with or without nephropathy","secondary_identifiers":["OMIM:166300","DOID:0111534","MESH:C567171","SCTID:766992008","MEDGEN:436237","UMLS:C2674705","GARD:3818"],"synonyms":[{"name":"Carnevale canun Mendoza syndrome","type":"related"},{"name":"MCTO","type":"related"},{"name":"idiopathic multicentric osteolysis with or without nephropathy","type":"exact"},{"name":"multicentric carpo-tarsal osteolysis with or without nephropathy","type":"exact"},{"name":"multicentric carpotarsal osteolysis syndrome","type":"related"},{"name":"multicentric osteolysis nephropathy","type":"related"},{"name":"multicentric osteolysis, autosomal dominant","type":"related"},{"name":"osteolysis, hereditary, of carpal bones with or without nephropathy","type":"related"}],"termid":"MONDO:0008152","xrefs":{"Monarch":{"xref_id":"0008152"}}}


id: PBO:0052682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 50","termid":"PBO:0052682"}


id: MONDO:0021826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection with the less common aerobic antinomyces bacteria.","definition_xrefs":["PMID:14875224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actinomycosis","termid":"MONDO:0005631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aerobic Actinomyces infection","secondary_identifiers":["UMLS:C2931717","MESH:C538054","MEDGEN:419478","GARD:9779"],"termid":"MONDO:0021826","xrefs":{"Monarch":{"xref_id":"0021826"}}}


id: GO:0019748
data:
  {"annotated_genes":["SJAG_01351","SJAG_04516","SJAG_04031","SJAG_00469","SJAG_02599","SJAG_04032","SJAG_00792","SJAG_00988"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93597,93589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031169"},{"annotations":[93543],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905569"},{"annotations":[96505,96861,92792,107922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046938"},{"annotations":[96506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090423"},{"annotations":[104888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019290"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in many of the chemical changes of compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon. In multicellular organisms secondary metabolism is generally carried out in specific cell types, and may be useful for the organism as a whole. In unicellular organisms, secondary metabolism is often used for the production of antibiotics or for the utilization and acquisition of unusual nutrients.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00469":null,"SJAG_00792":null,"SJAG_00988":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_04031":null,"SJAG_04032":null,"SJAG_04516":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secondary metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Secondary_metabolism"],"synonyms":[{"name":"secondary metabolism","type":"exact"},{"name":"secondary metabolite metabolic process","type":"exact"},{"name":"secondary metabolite metabolism","type":"exact"}],"termid":"GO:0019748","terms_by_termid":{"GO:0019290":null,"GO:0031169":null,"GO:0046938":null,"GO:0090423":null,"GO:1905569":null}}


id: GO:0140318
data:
  {"annotated_genes":["SJAG_04203","SJAG_01879","SJAG_03502","SJAG_02077","SJAG_05259","SJAG_01949","SJAG_03560","SJAG_02330","SJAG_04208","SJAG_01597","SJAG_00959","SJAG_03515","SJAG_02208","SJAG_00373","SJAG_00175","SJAG_02524","SJAG_04996","SJAG_03358","SJAG_04218","SJAG_03415","SJAG_01640","SJAG_01435"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88134,89871,115766],"is_not":false,"summary":null,"term":"GO:0140318"},{"annotations":[115806,100519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140567"},{"annotations":[106788,114727,97546,108827,105662,98930,105667,109123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008320"},{"annotations":[102786,90379,99045,99817,104682,107060,107081,96375,111292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015450"}]},"cv_name":"molecular_function","definition":"Directly binding to a specific protein and delivering it to a specific cellular location.","definition_xrefs":["PMID:18706423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter activity","termid":"GO:0005215"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00175":null,"SJAG_00373":null,"SJAG_00959":null,"SJAG_01435":null,"SJAG_01597":null,"SJAG_01640":null,"SJAG_01879":null,"SJAG_01949":null,"SJAG_02077":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02524":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_04203":null,"SJAG_04208":null,"SJAG_04218":null,"SJAG_04996":null,"SJAG_05259":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674"],"is_obsolete":false,"name":"protein transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9662747","Reactome:R-HSA-9662818","Reactome:R-HSA-2248891"],"synonyms":[{"name":"protein carrier activity","type":"related"},{"name":"protein transport chaperone","type":"related"}],"termid":"GO:0140318","terms_by_termid":{"GO:0008320":null,"GO:0015450":null,"GO:0140318":null,"GO:0140567":null}}


id: GO:0033874
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + 5beta-scymnol = 5beta-scymnol sulfate + adenosine 3',5'-diphosphate + H+.","definition_xrefs":["EC:2.8.2.32","RHEA:15477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016782","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"scymnol sulfotransferase activity","secondary_identifiers":["KEGG_REACTION:R07798","MetaCyc:2.8.2.32-RXN"],"termid":"GO:0033874"}


id: MONDO:0021355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the esophagus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"},{"relation_name":"is_a","term_name":"digestive system neoplasm","termid":"MONDO:0021223"},{"relation_name":"is_a","term_name":"neoplasm of thorax","termid":"MONDO:0021350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"neoplasm of esophagus","secondary_identifiers":["MEDGEN:4547","SCTID:126817006","NCIT:C3028","UMLS:C0014859"],"synonyms":[{"name":"esophageal neoplasm","type":"exact"},{"name":"esophageal neoplasms, benign and malignant","type":"exact"},{"name":"esophageal tumor","type":"exact"},{"name":"esophageal tumors","type":"exact"},{"name":"esophageal tumour","type":"exact"},{"name":"esophageal tumours","type":"exact"},{"name":"esophagus neoplasm","type":"exact"},{"name":"esophagus neoplasm (disease)","type":"exact"},{"name":"esophagus tumor","type":"exact"},{"name":"neoplasm of esophagus","type":"exact"},{"name":"neoplasm of the esophagus","type":"exact"},{"name":"neoplasm of the oesophagus","type":"exact"},{"name":"oesophagus neoplasm","type":"exact"},{"name":"oesophagus neoplasm (disease)","type":"exact"},{"name":"oesophagus tumour","type":"exact"},{"name":"tumor of esophagus","type":"exact"},{"name":"tumor of the esophagus","type":"exact"},{"name":"tumour of oesophagus","type":"exact"},{"name":"tumour of the oesophagus","type":"exact"}],"termid":"MONDO:0021355","xrefs":{"Monarch":{"xref_id":"0021355"}}}


id: PBO:0063675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 3 pseudogene 4","termid":"PBO:0063675"}


id: PBO:0073675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal regulatory protein delta","termid":"PBO:0073675"}


id: GO:0018778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: trichloroacetate + 2 H2O = 3 H+ + 3 Cl- + oxalate.","definition_xrefs":["PMID:7068529"],"gene_count":0,"genotype_count":0,"name":"obsolete DL-2 haloacid dehalogenase activity (obsolete GO:0018778)","termid":"GO:0018778"}


id: PBO:0080300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 64 pseudogene","termid":"PBO:0080300"}


id: PBO:0074610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 14B","termid":"PBO:0074610"}


id: PBO:0038718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 13","termid":"PBO:0038718"}


id: FYPO:0002217
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are viable, elongated, and curved along the long axis in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable curved elongated vegetative cell population (obsolete FYPO:0002217)","synonyms":[{"name":"population of curved viable long cells","type":"exact"},{"name":"viable curved long vegetative cell population","type":"exact"}],"termid":"FYPO:0002217"}


id: MONDO:0017044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome, associating familial adult medullary cystic disease with spastic quadriparesis has been described in two cases so far. Renal transplantation was successful in those two patients.","definition_xrefs":["Orphanet:2666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial cystic renal disease","termid":"MONDO:0019741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"adult familial nephronophthisis-spastic quadriparesia syndrome","secondary_identifiers":["MEDGEN:1385988","GARD:18777","UMLS:C4518090"],"termid":"MONDO:0017044","xrefs":{"Monarch":{"xref_id":"0017044"}}}


id: PBO:0059357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S17 pseudogene 1","termid":"PBO:0059357"}


id: PBO:0068300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 6","termid":"PBO:0068300"}


id: GO:0005319
data:
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id: PBO:0038518
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id: GO:0031516
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id: PBO:0072863
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id: PBO:0078728
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id: GO:0031903
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id: PBO:0081657
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id: PBO:0034218
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id: MONDO:0018004
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id: PBO:0045617
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id: PBO:0002564
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id: PBO:0027451
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id: PBO:0007590
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id: PBO:0051538
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id: GO:0060665
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id: FYPO:0006999
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id: PBO:0073035
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id: PBO:0090191
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id: MONDO:0009834
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id: GO:0008652
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process","type":"exact"}],"termid":"GO:0008652","terms_by_termid":{"GO:0000105":null,"GO:0000162":null,"GO:0006526":null,"GO:0006529":null,"GO:0006532":null,"GO:0006535":null,"GO:0006542":null,"GO:0006545":null,"GO:0006564":null,"GO:0006571":null,"GO:0006592":null,"GO:0009085":null,"GO:0009086":null,"GO:0009088":null,"GO:0009090":null,"GO:0009094":null,"GO:0009097":null,"GO:0009098":null,"GO:0009099":null,"GO:0019240":null,"GO:0019264":null,"GO:0019266":null,"GO:0019279":null,"GO:0019280":null,"GO:0019343":null,"GO:0019344":null,"GO:0019509":null,"GO:0019878":null,"GO:0042450":null,"GO:0055129":null,"GO:0070981":null,"GO:0071266":null,"GO:0071269":null,"GO:0097054":null,"GO:1901705":null,"GO:1990355":null}}


id: PBO:0042259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 4 pseudogene 1","termid":"PBO:0042259"}


id: PBO:0066401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regenerating family member 3 gamma","termid":"PBO:0066401"}


id: GO:0050688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the antiviral response of a cell or organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"defense response to virus","termid":"GO:0051607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of defense response to virus","synonyms":[{"name":"regulation of antiviral response","type":"exact"}],"termid":"GO:0050688"}


id: PBO:0017865
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli fbp","termid":"PBO:0017865"}


id: GO:0003206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cardiac chamber is generated and organized. A cardiac chamber is an enclosed cavity within the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"},{"relation_name":"part_of","term_name":"cardiac chamber development","termid":"GO:0003205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac chamber morphogenesis","synonyms":[{"name":"heart chamber morphogenesis","type":"exact"}],"termid":"GO:0003206"}


id: PBO:0044192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin A","termid":"PBO:0044192"}


id: PBO:0077809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p53 regulated apoptosis inducing protein 1","termid":"PBO:0077809"}


id: PBO:0090572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase (AGC family) Gad8","termid":"PBO:0090572"}


id: PBO:0062282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily J member 2","termid":"PBO:0062282"}


id: GO:0000193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Upregulation of MAP kinase activity in the context of regulating pseudohyphal or invasive growth.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPK (pseudohyphal growth) (obsolete GO:0000193)","synonyms":[{"name":"activation of MAPK (pseudohyphal growth)","type":"exact"}],"termid":"GO:0000193"}


id: GO:0004514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CO2 + diphosphate + nicotinate D-ribonucleotide = 5-phospho-alpha-D-ribose 1-diphosphate + 2 H+ + quinolinate.","definition_xrefs":["EC:2.4.2.19","RHEA:12733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"nicotinate-nucleotide diphosphorylase (carboxylating) activity","secondary_identifiers":["KEGG_REACTION:R03348","Reactome:R-HSA-197268","MetaCyc:QUINOPRIBOTRANS-RXN"],"synonyms":[{"name":"NAD pyrophosphorylase activity","type":"related"},{"name":"QAPRTase activity","type":"related"},{"name":"nicotinate mononucleotide pyrophosphorylase (carboxylating)","type":"related"},{"name":"nicotinate-nucleotide pyrophosphorylase (carboxylating) activity","type":"exact"},{"name":"nicotinate-nucleotide:diphosphate phospho-alpha-D-ribosyltransferase (carboxylating)","type":"related"},{"name":"quinolinate phosphoribosyltransferase (decarboxylating) activity","type":"related"},{"name":"quinolinic acid phosphoribosyltransferase activity","type":"related"},{"name":"quinolinic phosphoribosyltransferase activity","type":"related"}],"termid":"GO:0004514"}


id: GO:0033419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CUA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0060090","GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"CUA codon-amino acid adaptor activity","synonyms":[{"name":"CTA codon-amino acid adaptor activity","type":"exact"},{"name":"leucine tRNA","type":"related"}],"termid":"GO:0033419"}


id: GO:0071219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of bacterial origin such as peptides derived from bacterial flagellin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to molecule of bacterial origin","termid":"GO:0002237"},{"relation_name":"is_a","term_name":"cellular response to biotic stimulus","termid":"GO:0071216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to molecule of bacterial origin","synonyms":[{"name":"cellular response to bacteria associated molecule","type":"exact"},{"name":"cellular response to bacterial associated molecule","type":"exact"},{"name":"cellular response to bacterium associated molecule","type":"exact"}],"termid":"GO:0071219"}


id: PBO:0075958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal transducing adaptor family member 2","termid":"PBO:0075958"}


id: MONDO:0019931
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Leydig cell hypoplasia, type 1","termid":"MONDO:0009384"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leydig cell hypoplasia due to partial LH resistance","secondary_identifiers":["GARD:16852","Orphanet:96266","UMLS:C5438975","MEDGEN:1739565","DOID:0112261"],"synonyms":[{"name":"46,XY DSD due to partial LH receptor inactivation","type":"exact"},{"name":"46,XY DSD due to partial LH resistance","type":"exact"},{"name":"46,XY DSD due to partial luteinizing hormone resistance","type":"exact"},{"name":"46,XY disorder of sex development due to partial LH receptor inactivation","type":"exact"},{"name":"46,XY disorder of sex development due to partial LH resistance","type":"exact"},{"name":"46,XY disorder of sex development due to partial luteinizing hormone resistance","type":"exact"},{"name":"Leydig cell hypoplasia due to partial LH receptor inactivation","type":"exact"},{"name":"Leydig cell hypoplasia due to partial luteinizing hormone receptor inactivation","type":"exact"},{"name":"Leydig cell hypoplasia due to partial luteinizing hormone resistance","type":"exact"}],"termid":"MONDO:0019931","xrefs":{"Monarch":{"xref_id":"0019931"}}}


id: FYPO:0007086
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is elongated when the cell is subject to sulfur starvation.","definition_xrefs":["PomBase:mah","PMID:28388826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable elongated vegetative cell","termid":"FYPO:0001492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"elongated vegetative cell during sulfur starvation","synonyms":[{"name":"elongated cell during sulfur starvation during vegetative growth","type":"exact"},{"name":"elongated vegetative cell during cellular response to sulfur starvation","type":"exact"},{"name":"elongated vegetative cell during sulfur starvation during mitotic cell cycle","type":"related"},{"name":"elongated vegetative cell during sulphur starvation","type":"exact"}],"termid":"FYPO:0007086"}


id: PR:Q9P4W9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps403 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P4W9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S4-C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC959.07","synonyms":[{"name":"Spom972h-rps403","type":"exact"}],"termid":"PR:Q9P4W9"}


id: MONDO:0017721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Sandhoff disease","termid":"MONDO:0010006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0002039","MONDO:0005066","MONDO:0005244","MONDO:0005559","MONDO:0005328","MONDO:0002525"],"is_obsolete":false,"name":"Sandhoff disease, infantile form","secondary_identifiers":["Orphanet:309155","UMLS:C0751490","MEDGEN:199669","SCTID:238018004","GARD:7604"],"synonyms":[{"name":"Hexosaminidases A and B deficiency, infantile form","type":"exact"},{"name":"infantile GM2 gangliosidosis 0 variant","type":"exact"}],"termid":"MONDO:0017721","xrefs":{"Monarch":{"xref_id":"0017721"}}}


id: PR:O94562
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1773.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized aminotransferase C1771.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.03c","synonyms":[{"name":"Spom972h-SPBC1773.03c","type":"exact"}],"termid":"PR:O94562"}


id: PBO:0045166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member A1","termid":"PBO:0045166"}


id: PBO:0082965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein of unknown function; potential Cdc28p substrate; contains a Phox homology (PX) domain and specifically binds phosphatidylinositol 3-phosphate (PtdIns-3-P); YKR078W has a paralog, VPS5, that arose from the whole genome duplication","termid":"PBO:0082965"}


id: PBO:0004389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L29","termid":"PBO:0004389"}


id: PBO:0067013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 22, pseudogene","termid":"PBO:0067013"}


id: GO:0061611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways in which mannose, the aldohexose manno-hexose, is converted to fructose-6-phosphate.","definition_xrefs":["GOC:dph","ISBN:0201090910","ISBN:0879010479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose 6-phosphate metabolic process","termid":"GO:0006002"},{"relation_name":"is_a","term_name":"mannose catabolic process","termid":"GO:0019309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"mannose to fructose-6-phosphate catabolic process","synonyms":[{"name":"mannose metabolism to fructose-6-phosphate","type":"exact"}],"termid":"GO:0061611"}


id: MONDO:0007327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial chylomicronemia syndrome","termid":"MONDO:0018637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chylomicronemia, familial, due to circulating inhibitor of lipoprotein lipase","secondary_identifiers":["MEDGEN:348391","MESH:C566126","OMIM:118830","UMLS:C1861560","DOID:0111419"],"synonyms":[{"name":"chylomicronemia, familial, due to circulating inhibitor of lipoprotein lipase","type":"exact"},{"name":"hyperlipoproteinemia, type 1C","type":"related"}],"termid":"MONDO:0007327","xrefs":{"Monarch":{"xref_id":"0007327"}}}


id: GO:0106393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a palmitic acid catabolic process.","definition_xrefs":["PMID:14677856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid metabolic process","termid":"GO:0019217"},{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"regulates","term_name":"palmitic acid catabolic process","termid":"GO:1900534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of palmitic acid catabolic process","termid":"GO:0106393"}


id: GO:0039011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a pronephric nephron proximal tubule are generated and organized. A pronephric nephron tubule is an epithelial tube that is part of the pronephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pronephric nephron tubule morphogenesis","termid":"GO:0039008"},{"relation_name":"is_a","term_name":"proximal tubule morphogenesis","termid":"GO:0072158"},{"relation_name":"part_of","term_name":"pronephric proximal tubule development","termid":"GO:0035776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric proximal tubule morphogenesis","synonyms":[{"name":"pronephros proximal tubule morphogenesis","type":"exact"}],"termid":"GO:0039011"}


id: PBO:0062667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily I member 1 pseudogene","termid":"PBO:0062667"}


id: MONDO:0010129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by intrauterine growth retardation, renal dysgenesis and a unilobed or absent thymus.","definition_xrefs":["Orphanet:3326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymic-renal-anal-lung dysplasia","secondary_identifiers":["OMIM:274265","SCTID:723555007","UMLS:C1848812","GARD:5202","MEDGEN:336425","MESH:C536907"],"synonyms":[{"name":"syndrome of unilobed or absent thymus, renal and ureter agenesis/dysgenesis, and intrauterine growth retardation (IUGR)","type":"related"},{"name":"thymic-renal-anal-lung dysplasia","type":"exact"}],"termid":"MONDO:0010129","xrefs":{"Monarch":{"xref_id":"0010129"}}}


id: GO:0047127
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + thiomorpholine-3-carboxylate = NAD(P)H + 3,4-dehydro-1,4-thiomorpholine-3-carboxylate.","definition_xrefs":["EC:1.5.1.25","MetaCyc:1.5.1.25-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"thiomorpholine-carboxylate dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-5693347"],"synonyms":[{"name":"ketimine reductase activity","type":"related"},{"name":"ketimine-reducing enzyme","type":"related"},{"name":"thiomorpholine-3-carboxylate:NAD(P)+ 5,6-oxidoreductase activity","type":"related"}],"termid":"GO:0047127"}


id: PBO:0079154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 14","termid":"PBO:0079154"}


id: MONDO:0850046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amniotic fluid embolism","secondary_identifiers":["Orphanet:617304","icd11.foundation:1017418792","MEDGEN:8586","GARD:22448","UMLS:C0013927"],"termid":"MONDO:0850046","xrefs":{"Monarch":{"xref_id":"0850046"}}}


id: GO:0002496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydrolysis of a peptide bond or bonds within a protein contributing to antigen processing and presentation.","definition_xrefs":["GOC:add","PMID:15771591","ISBN:0781735149","PMID:15224092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteolysis involved in protein catabolic process","termid":"GO:0051603"},{"relation_name":"part_of","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"proteolysis associated with antigen processing and presentation","termid":"GO:0002496"}


id: PBO:0039440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and FYVE domain containing 1","termid":"PBO:0039440"}


id: SO:0000041
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An operation that can be applied to a sequence, that results in a change.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000041 sequence_operation (obsolete SO:0000041)","synonyms":[{"name":"sequence operation","type":"exact"}],"termid":"SO:0000041"}


id: PATO:0002056
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fragility which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"fragile","termid":"PATO:0001362"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased fragility","termid":"PATO:0002056"}


id: PBO:0090919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine-N7-)-methyltransferase WD repeat subunit Trm82","termid":"PBO:0090919"}


id: PR:O13988
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protection of telomeres protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR14513:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protection of telomeres protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26H5.06","secondary_identifiers":["UniProtKB:O13988"],"synonyms":[{"name":"SPAC26H5.06","type":"related"},{"name":"Spom972h-POT1","type":"exact"}],"termid":"PR:O13988"}


id: PBO:0041912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cbl proto-oncogene like 2","termid":"PBO:0041912"}


id: FYPO:0001420
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a population of cells grow at the same rate as wild type in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"},{"relation_name":"is_a","term_name":"normal cell population growth rate","termid":"FYPO:0001419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002060","FYPO:0000139","FYPO:0000257","FYPO:0000003","FYPO:0002058"],"is_obsolete":false,"name":"normal vegetative cell population growth rate","synonyms":[{"name":"normal growth rate","type":"broad"},{"name":"normal vegetative cell population proliferation","type":"related"},{"name":"normal vegetative cell proliferation","type":"related"}],"termid":"FYPO:0001420"}


id: MONDO:0034968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare ocular motility/alignment disorder (obsolete MONDO:0034968)","secondary_identifiers":["Orphanet:519355"],"termid":"MONDO:0034968","xrefs":{"Monarch":{"xref_id":"0034968"}}}


id: GO:0003853
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Catalysis of the reaction: a short-chain 2-methyl fatty acyl-CoA + H+ + oxidized [electron-transfer flavoprotein] = a short-chain (2E)-2-methyl-2-enoyl-CoA + reduced [electron-transfer flavoprotein].","definition_xrefs":["PMID:6401712","PMID:10989435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acyl-CoA dehydrogenase activity","termid":"GO:0016937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"short-chain 2-methyl fatty acyl-CoA dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03169","EC:1.3.8.5","GO:0047119"],"synonyms":[{"name":"2-methyl branched chain acyl-CoA dehydrogenase activity","type":"narrow"},{"name":"2-methyl-branched-chain-enoyl-CoA reductase activity","type":"related"},{"name":"2-methylacyl-CoA dehydrogenase activity","type":"narrow"},{"name":"2-methylbutanoyl-CoA dehydrogenase activity","type":"narrow"},{"name":"2-methylpropanoyl-CoA dehydrogenase activity","type":"narrow"},{"name":"branched-chain acyl-CoA dehydrogenase activity","type":"narrow"},{"name":"isobutyryl-CoA:FAD oxidoreductase activity","type":"narrow"}],"termid":"GO:0003853"}


id: PATO:0000722
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000722 relative yield value (obsolete PATO:0000722)","termid":"PATO:0000722"}


id: PBO:0044430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily A member 22","termid":"PBO:0044430"}


id: GO:2000185
data:
  {"annotated_genes":["SJAG_04990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98895],"is_not":false,"summary":null,"term":"GO:2000185"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphate transmembrane transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphate transport","termid":"GO:0010966"},{"relation_name":"is_a","term_name":"regulation of inorganic anion transmembrane transport","termid":"GO:1903795"},{"relation_name":"regulates","term_name":"phosphate ion transmembrane transport","termid":"GO:0035435"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of phosphate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of phosphate membrane transport","type":"exact"}],"termid":"GO:2000185","terms_by_termid":{"GO:2000185":null}}


id: PBO:0080958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 2","termid":"PBO:0080958"}


id: GO:1990872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of sterol import, by down regulation of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:rb","PMID:19793923"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of sterol import by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1990872)","synonyms":[{"name":"negative regulation of sterol import by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol import by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"negative regulation of sterol import by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol import by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol import by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol import by upregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol influx by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol influx by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol influx by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol influx by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol influx by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol influx by upregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol uptake by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol uptake by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol uptake by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol uptake by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol uptake by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol uptake by upregulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1990872"}


id: FYPO:0001686
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing the tubulin poison carbendazim (mecarzole; MBC).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0002058","FYPO:0002060","FYPO:0000139","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on carbendazim","synonyms":[{"name":"normal cell population growth in presence of carbendazim","type":"exact"},{"name":"normal cell population growth on carbendazim","type":"exact"},{"name":"normal cell population growth on mecarzole","type":"exact"},{"name":"normal cellular response to carbendazim","type":"related"},{"name":"normal growth on MBC","type":"exact"},{"name":"normal growth on methyl benzimidazole-2-yl-carbamate","type":"exact"},{"name":"normal growth on methylbenzylcarbamylate","type":"exact"},{"name":"normal vegetative cell population growth on carbendazim","type":"exact"}],"termid":"FYPO:0001686"}


id: GO:0055047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the generative cell divides by mitosis to form two haploid cells. These will subsequently differentiate into sperm cells.","definition_xrefs":["GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic nuclear division","termid":"GO:0140014"},{"relation_name":"part_of","term_name":"male gamete generation","termid":"GO:0048232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"generative cell mitosis","termid":"GO:0055047"}


id: MONDO:0019049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare dystonia.","gene_count":0,"genotype_count":0,"name":"obsolete rare dystonia (obsolete MONDO:0019049)","secondary_identifiers":["Orphanet:68363"],"synonyms":[{"name":"rare dystonia","type":"exact"},{"name":"rare dystonia (disease)","type":"exact"},{"name":"rare dystonic disorder","type":"exact"}],"termid":"MONDO:0019049","xrefs":{"Monarch":{"xref_id":"0019049"}}}


id: PBO:0051530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 2 receptor subunit beta","termid":"PBO:0051530"}


id: PBO:0011087
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae URA1","termid":"PBO:0011087"}


id: PBO:0082784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the TOM (translocase of outer membrane) complex; responsible for recognition and initial import of all mitochondrially directed proteins; involved in transfer of precursors from the Tom70p and Tom20p receptors to the Tom40p pore","termid":"PBO:0082784"}


id: MONDO:1010790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any painful thickening of the footpads with severe keratinous proliferations and fissures that occurs in dogs due to a mutation in the KRT16 gene.","definition_xrefs":["PMID:25521457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focal nonepidermolytic palmoplantar keratoderma, KRT16-related, dog","secondary_identifiers":["OMIA:002088-9615"],"synonyms":[{"name":"palmoplantar keratoderma, nonepidermolytic, focal 1, dog","type":"related"}],"termid":"MONDO:1010790","xrefs":{"Monarch":{"xref_id":"1010790"}}}


id: PBO:0061081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK2 homeobox 1","termid":"PBO:0061081"}


id: PBO:0038409
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_positively_regulates_activity_of","termid":"PBO:0038409"}


id: FYPO:0000907
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrion inheritance is abolished, resulting in the formation of a daughter cell that lacks mitochondria.","definition_xrefs":["GO:0000001","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrion inheritance during vegetative growth","termid":"FYPO:0000906"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished mitochondrion inheritance during vegetative growth","synonyms":[{"name":"abolished mitochondrion inheritance during mitotic cell cycle","type":"related"},{"name":"asymmetric mitochondrial inheritance during vegetative growth","type":"related"},{"name":"mitochondrion inheritance abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0000907"}


id: MONDO:0002973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma characterized by the presence of malignant large epithelioid melanocytes.","definition_xrefs":["NCIT:C4236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanoma","termid":"MONDO:0005105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelioid cell melanoma","secondary_identifiers":["MEDGEN:137763","ICDO:8771/3","DOID:4360","UMLS:C0334443"],"synonyms":[{"name":"epithelioid cell malignant melanoma","type":"exact"},{"name":"epithelioid cell melanoma","type":"exact"},{"name":"epithelioid cell melanoma (morphologic abnormality)","type":"exact"},{"name":"epithelioid melanoma","type":"exact"}],"termid":"MONDO:0002973","xrefs":{"Monarch":{"xref_id":"0002973"}}}


id: PBO:0065198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 19","termid":"PBO:0065198"}


id: MONDO:0002293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A ganglioneuroma arising from the skin.","definition_xrefs":["NCIT:C4481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin cancer","termid":"MONDO:0002898"},{"relation_name":"is_a","term_name":"ganglioneuroma","termid":"MONDO:0005033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"cutaneous ganglioneuroma","secondary_identifiers":["DOID:2425","SCTID:254766004","UMLS:C0346063","MEDGEN:91077"],"synonyms":[{"name":"cutaneous ganglioneuroma","type":"exact"},{"name":"ganglioneuroma of skin","type":"exact"},{"name":"ganglioneuroma of the skin","type":"exact"},{"name":"skin ganglioneuroma","type":"exact"}],"termid":"MONDO:0002293","xrefs":{"Monarch":{"xref_id":"0002293"}}}


id: PBO:0074608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 13","termid":"PBO:0074608"}


id: PBO:0088442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetohydroxyacid reductoisomerase","termid":"PBO:0088442"}


id: PBO:0061568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal asparagine amidase pseudogene 2","termid":"PBO:0061568"}


id: PR:Q9P5N1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pfl7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P5N1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell-type specific agglutination protein C359.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC359.04c","synonyms":[{"name":"Spom972h-pfl7","type":"exact"}],"termid":"PR:Q9P5N1"}


id: GO:0060511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which splanchnic mesenchymal cells send a signal over a short range to endodermal cells inducing them to form the primary lung bud.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"gene_count":0,"genotype_count":0,"name":"obsolete creation of an inductive signal by a mesenchymal cell involved in lung induction (obsolete GO:0060511)","termid":"GO:0060511"}


id: GO:0047893
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + a flavonol = UDP + a flavonol 3-O-D-glucoside.","definition_xrefs":["EC:2.4.1.91","MetaCyc:FLAVONOL-3-O-GLUCOSYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"flavonol 3-O-glucosyltransferase activity","secondary_identifiers":["RHEA:22300"],"synonyms":[{"name":"GTI","type":"related"},{"name":"UDP-glucose flavonol 3-O-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:flavonol 3-O-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:flavonol 3-O-glucosyltransferase activity","type":"related"},{"name":"UDPG:flavonoid-3-O-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:flavonol 3-O-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-flavonol 3-O-glucosyltransferase activity","type":"related"}],"termid":"GO:0047893"}


id: MONDO:0018780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"congenital generalized hypercontractile muscle stiffness syndrome","secondary_identifiers":["GARD:21956","MEDGEN:1799212","UMLS:C5567789","Orphanet:476406"],"termid":"MONDO:0018780","xrefs":{"Monarch":{"xref_id":"0018780"}}}


id: PBO:0053804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1061","termid":"PBO:0053804"}


id: MONDO:0000605
data:
  {"annotated_genes":["SJAG_03453","SJAG_01787","SJAG_00610"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86138],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013767"},{"annotations":[85309,85308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000024"}]},"cv_name":"mondo","definition":"An immune system disease that has basis in dysregulation of the hypersensitivity reaction, an inflammatory response to an exogenous environmental antigen or an endogenous antigen initiated by the adaptive immune system.","definition_xrefs":["ISBN-13:978-0-7817-3514-8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"hypersensitivity reaction disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3532523","DOID:0060056","EFO:1002003","NCIT:C3114","SCTID:473010000","MEDGEN:759636"],"synonyms":[{"name":"allergic reaction","type":"broad"},{"name":"hypersensitive","type":"exact"},{"name":"hypersensitivity","type":"exact"},{"name":"hypersensitivity reaction","type":"exact"},{"name":"sensitive","type":"broad"},{"name":"sensitivity","type":"broad"}],"termid":"MONDO:0000605","terms_by_termid":{"MONDO:0013767":null,"MONDO:8000024":null},"xrefs":{"Monarch":{"xref_id":"0000605"}}}


id: GO:0010197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The merging of the polar nuclei, the two nuclei contained within the same cell that are created from the mitotic division of the megaspore during angiosperm reproduction. Polar nuclear fusion takes place in the ovule, forming in the fusion nucleus and giving rise to the endosperm when fertilized.","definition_xrefs":["GOC:sm","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"karyogamy","termid":"GO:0000741"},{"relation_name":"part_of","term_name":"embryo sac central cell differentiation","termid":"GO:0009559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polar nucleus fusion","termid":"GO:0010197"}


id: MONDO:0700074
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any multiple acyl-CoA dehydrogenase deficiency in which the cause of the disease is a mutation in the ETFB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple acyl-CoA dehydrogenase deficiency","termid":"MONDO:0009282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005267","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"glutaric acidemia IIb","secondary_identifiers":["UMLS:C3278155","MEDGEN:479785"],"synonyms":[{"name":"ETFB deficiency","type":"exact"},{"name":"GA2B","type":"exact"},{"name":"glutaric acidemia 2B","type":"exact"},{"name":"multiple acyl-CoA dehydrogenase deficiency caused by mutation in ETFB","type":"exact"}],"termid":"MONDO:0700074","xrefs":{"Monarch":{"xref_id":"0700074"}}}


id: GO:0002883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of hypersensitivity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of acute inflammatory response to antigenic stimulus","termid":"GO:0002864"},{"relation_name":"regulates","term_name":"hypersensitivity","termid":"GO:0002524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hypersensitivity","termid":"GO:0002883"}


id: MONDO:0044794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, circumscribed proliferation of melanocytes in the skin. Variants include the Spitz nevus, halo nevus, blue nevus, and balloon cell nevus.","definition_xrefs":["NCIT:C7571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"benign melanocytic skin nevus","secondary_identifiers":["MEDGEN:264151","UMLS:C1456781"],"synonyms":[{"name":"benign melanocytic nevus","type":"exact"},{"name":"benign melanocytic nevus of skin","type":"exact"},{"name":"benign melanocytic nevus of the skin","type":"exact"},{"name":"benign melanocytic skin nevus","type":"exact"},{"name":"benign mole","type":"exact"},{"name":"benign nevus of skin","type":"exact"},{"name":"benign nevus of the skin","type":"exact"},{"name":"benign skin nevus","type":"exact"}],"termid":"MONDO:0044794","xrefs":{"Monarch":{"xref_id":"0044794"}}}


id: FYPO:0002479
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is viable and has a larger volume, and is longer, than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen vegetative cell","termid":"FYPO:0000646"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"swollen elongated cell","termid":"FYPO:0001429"},{"relation_name":"is_a","term_name":"viable vegetative cell","termid":"FYPO:0001491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0000004","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"viable swollen elongated vegetative cell","synonyms":[{"name":"viable elongated cell with increased cell volume","type":"exact"},{"name":"viable enlarged elongated cell","type":"related"},{"name":"viable large elongated cell","type":"related"},{"name":"viable swollen elongated cell during vegetative growth","type":"exact"},{"name":"viable swollen elongated vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002479"}


id: GO:0048361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving mucilage that occur in the root epithelium; mucilage is normally synthesized during root growth.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucilage metabolic process","termid":"GO:0010191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root epithelial mucilage metabolic process","synonyms":[{"name":"root epithelial mucilage metabolism","type":"exact"}],"termid":"GO:0048361"}


id: PBO:0069905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1196, pseudogene","termid":"PBO:0069905"}


id: PBO:0069686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 965, pseudogene","termid":"PBO:0069686"}


id: GO:0004626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a fatty acid anion.","definition_xrefs":["EC:3.1.1.4"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic phospholipase A2 activity (obsolete GO:0004626)","synonyms":[{"name":"cytosolic phospholipase A2 activity","type":"exact"}],"termid":"GO:0004626"}


id: GO:0060878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which an epithelial sheet bends along a linear axis and gives rise to a pouch that will form a semicircular canal.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"morphogenesis of an epithelial fold","termid":"GO:0060571"},{"relation_name":"part_of","term_name":"semicircular canal formation","termid":"GO:0060876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pouch outgrowth involved in semicircular canal formation","termid":"GO:0060878"}


id: FYPO:0005073
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic chromosome condensation occurs to a lower extent than normal along the chromosome arms.","definition_xrefs":["GO:1990892","PMID:21633354","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic chromosome condensation","termid":"FYPO:0003286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0000293","FYPO:0001320","FYPO:0005447","FYPO:0000337","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"decreased mitotic chromosome arm condensation","synonyms":[{"name":"decreased chromosome arm condensation during mitotic cell cycle","type":"related"},{"name":"decreased mitotic chromosome arm chromatin condensation","type":"exact"},{"name":"decreased mitotic chromosome arm condensation during vegetative growth","type":"exact"},{"name":"decreased mitotic chromosome condensation along chromosome arms","type":"exact"},{"name":"reduced mitotic chromosome arm condensation","type":"exact"}],"termid":"FYPO:0005073"}


id: PBO:0063605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 26","termid":"PBO:0063605"}


id: PBO:0061918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily E member 1","termid":"PBO:0061918"}


id: GO:0009151
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a purine base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide metabolic process","termid":"GO:0006163"},{"relation_name":"is_a","term_name":"2'-deoxyribonucleotide metabolic process","termid":"GO:0009394"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine deoxyribonucleotide metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine deoxyribonucleotide metabolism","type":"exact"}],"termid":"GO:0009151","terms_by_termid":{"GO:0035863":null}}


id: MOD:01642
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-lysine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysine removal","termid":"MOD:01642"}


id: PBO:0003999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin CycC, Srb mediator subunit Srb11","termid":"PBO:0003999"}


id: GO:0160079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with glycine and transmitting the signal across the membrane by changing the activity of intracellular G protein signaling.","definition_xrefs":["PMID:36996198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled neurotransmitter receptor activity","termid":"GO:0099528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled glycine receptor activity","synonyms":[{"name":"mGlyR","type":"exact"},{"name":"metabotropic glycine receptor activity","type":"exact"}],"termid":"GO:0160079"}


id: GO:0030489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete processing of 27S pre-rRNA (obsolete GO:0030489)","synonyms":[{"name":"processing of 27S pre-rRNA","type":"exact"}],"termid":"GO:0030489"}


id: PBO:0045535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxythymidylate kinase","termid":"PBO:0045535"}


id: PBO:0057575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 802","termid":"PBO:0057575"}


id: PBO:0027665
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromatin_silencing_at_telomere","termid":"PBO:0027665"}


id: MONDO:0021036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of dry skin characterized by hair follicles plugged by scale.","direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"keratosis pilaris","secondary_identifiers":["icd11.foundation:1614890502","NCIT:C124070","SCTID:5132005","UMLS:C0263383","MEDGEN:82664"],"synonyms":[{"name":"KP","type":"exact"}],"termid":"MONDO:0021036","xrefs":{"Monarch":{"xref_id":"0021036"}}}


id: PBO:0057574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 770","termid":"PBO:0057574"}


id: GO:1904177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of adipose tissue development.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23081848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"adipose tissue development","termid":"GO:0060612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of adipose tissue development","secondary_identifiers":["Reactome:R-HSA-9843745"],"synonyms":[{"name":"regulation of adipogenesis","type":"related"}],"termid":"GO:1904177"}


id: GO:1900103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endoplasmic reticulum unfolded protein response.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endoplasmic reticulum unfolded protein response","termid":"GO:1900101"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"is_a","term_name":"positive regulation of response to endoplasmic reticulum stress","termid":"GO:1905898"},{"relation_name":"positively_regulates","term_name":"endoplasmic reticulum unfolded protein response","termid":"GO:0030968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of endoplasmic reticulum unfolded protein response","synonyms":[{"name":"activation of ER unfolded protein response","type":"exact"},{"name":"activation of SREBP-mediated signalling pathway","type":"related"},{"name":"activation of endoplasmic reticulum unfolded protein response","type":"narrow"},{"name":"activation of erUPR","type":"exact"},{"name":"positive regulation of ER unfolded protein response","type":"exact"},{"name":"positive regulation of SREBP-mediated signalling pathway","type":"related"},{"name":"positive regulation of erUPR","type":"exact"},{"name":"up regulation of ER unfolded protein response","type":"exact"},{"name":"up regulation of SREBP-mediated signalling pathway","type":"related"},{"name":"up regulation of endoplasmic reticulum unfolded protein response","type":"exact"},{"name":"up regulation of erUPR","type":"exact"},{"name":"up-regulation of ER unfolded protein response","type":"exact"},{"name":"up-regulation of SREBP-mediated signalling pathway","type":"related"},{"name":"up-regulation of endoplasmic reticulum unfolded protein response","type":"exact"},{"name":"up-regulation of erUPR","type":"exact"},{"name":"upregulation of ER unfolded protein response","type":"exact"},{"name":"upregulation of SREBP-mediated signalling pathway","type":"related"},{"name":"upregulation of endoplasmic reticulum unfolded protein response","type":"exact"},{"name":"upregulation of erUPR","type":"exact"}],"termid":"GO:1900103"}


id: GO:0018635
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (4R)-limonene + NAD(P)H + H+ + O2 = NAD(P)+ + H2O + (4R)-limonene-1,2-epoxide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete (R)-limonene 1,2-monooxygenase activity (obsolete GO:0018635)","termid":"GO:0018635"}


id: PBO:0083589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; YHR212C has a paralog, YAR060C, that arose from a segmental duplication","termid":"PBO:0083589"}


id: GO:0008190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to eukaryotic initiation factor 4E, a polypeptide factor involved in the initiation of ribosome-mediated translation.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation initiation factor binding","termid":"GO:0031369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"eukaryotic initiation factor 4E binding","synonyms":[{"name":"eIF4E binding","type":"exact"}],"termid":"GO:0008190"}


id: PBO:0057178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 329-2","termid":"PBO:0057178"}


id: GO:0030958
data:
  {"annotated_genes":["SJAG_03916","SJAG_02621","SJAG_03042"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90752,111698,117586],"is_not":false,"summary":null,"term":"GO:0030958"}]},"cv_name":"cellular_component","definition":"A protein complex required for heterochromatin assembly; contains an Argonaute homolog, a chromodomain protein, and at least one additional protein; named for RNA-induced initiation of transcriptional gene silencing.","definition_xrefs":["PMID:14704433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNAi effector complex","termid":"GO:0031332"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"},{"relation_name":"part_of","term_name":"heterochromatin","termid":"GO:0000792"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03042":null,"SJAG_03916":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694","GO:0005634"],"is_obsolete":false,"name":"RITS complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030958","terms_by_termid":{"GO:0030958":null}}


id: MONDO:0001761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition associated with glucose-6-phosphate dehydrogenase deficiency, which is characterized by hemolysis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G6PD deficiency","termid":"MONDO:0005775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"favism","secondary_identifiers":["DOID:13628","SCTID:191172001","MESH:D005236","MEDGEN:4667","NCIT:C34607","UMLS:C0015702"],"termid":"MONDO:0001761","xrefs":{"Monarch":{"xref_id":"0001761"}}}


id: GO:0044786
data:
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id: FYPO:0005371
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id: GO:0042563
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id: SO:0001716
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id: GO:0036096
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id: PBO:0089895
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id: MONDO:0009603
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cytoskeleton organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:27059155":null,"PMID:32915139":null},"synonyms":[{"name":"actin cytoskeleton organisation","type":"exact"},{"name":"actin cytoskeleton organization and biogenesis","type":"related"},{"name":"actin modulating activity","type":"related"}],"termid":"GO:0030036","terms_by_termid":{"GO:0000147":null,"GO:0000915":null,"GO:0007015":null,"GO:0030036":null,"GO:0030041":null,"GO:0030042":null,"GO:0030833":null,"GO:0030866":null,"GO:0030950":null,"GO:0031032":null,"GO:0032231":null,"GO:0032956":null,"GO:0034314":null,"GO:0034316":null,"GO:0044396":null,"GO:0044837":null,"GO:0045010":null,"GO:0051016":null,"GO:0051017":null,"GO:0051639":null,"GO:0051764":null,"GO:0061572":null,"GO:0061573":null,"GO:0070649":null,"GO:0071520":null,"GO:0090135":null,"GO:0110009":null,"GO:0120306":null,"GO:1902404":null,"GO:1903475":null,"GO:1903479":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:1904600":null,"GO:2000432":null}}


id: GO:0035219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Progression of the prothoracic disc over time, from its initial formation through to its metamorphosis to form the adult humerous and anterior spiracle.","definition_xrefs":["GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc development","termid":"GO:0007444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prothoracic disc development","termid":"GO:0035219"}


id: PBO:0003298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decaprenyl diphosphate synthase subunit Dps1","termid":"PBO:0003298"}


id: MONDO:0011031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the EYA4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 10","secondary_identifiers":["DOID:0110542","GARD:18103","MEDGEN:321966","MESH:C563354","OMIM:601316","UMLS:C1832476"],"synonyms":[{"name":"DFNA10","type":"narrow"},{"name":"EYA4 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 10","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 10","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in EYA4","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 10","type":"narrow"},{"name":"autosomal dominant nonsyndromic hearing loss 10","type":"exact"},{"name":"deafness, autosomal dominant 10","type":"narrow"},{"name":"deafness, autosomal dominant type 10","type":"narrow"}],"termid":"MONDO:0011031","xrefs":{"Monarch":{"xref_id":"0011031"}}}


id: PBO:0038603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with coiled-coil, ankyrin repeat and PH domains 3","termid":"PBO:0038603"}


id: GO:0002248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events leading to growth of connective tissue when loss of tissues that are incapable of regeneration occurs, or when fibrinous exudate cannot be adequately cleared, as part of an inflammatory response.","definition_xrefs":["GOC:jal","PMID:9639571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue replacement","termid":"GO:0097709"},{"relation_name":"part_of","term_name":"wound healing involved in inflammatory response","termid":"GO:0002246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"connective tissue replacement involved in inflammatory response wound healing","synonyms":[{"name":"connective tissue replacement during inflammatory response","type":"related"},{"name":"fibrosis during inflammatory response","type":"narrow"},{"name":"tissue fibrosis development","type":"narrow"}],"termid":"GO:0002248"}


id: PBO:0071748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L41 pseudogene 4","termid":"PBO:0071748"}


id: PBO:0043877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP responsive element binding protein 5","termid":"PBO:0043877"}


id: PBO:0058974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myeloid leukemia factor 1","termid":"PBO:0058974"}


id: MONDO:0001695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ectropion","termid":"MONDO:0002043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"senile ectropion","secondary_identifiers":["DOID:13356","ICD9:374.11","UMLS:C0155193","SCTID:71659009","MEDGEN:509841"],"synonyms":[{"name":"involutional ectropion","type":"exact"}],"termid":"MONDO:0001695","xrefs":{"Monarch":{"xref_id":"0001695"}}}


id: GO:0072742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a SAGA complex is transported to, or maintained in, a specific location in the transcription regulatory region of a gene.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"SAGA complex localization to transcription regulatory region","synonyms":[{"name":"SAGA complex localization to promoter","type":"exact"},{"name":"SAGA complex recruitment","type":"exact"}],"termid":"GO:0072742"}


id: GO:0035513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of the methyl group from one or more nucleotides within an RNA molecule involving oxidation (i.e. electron loss) of one or more atoms.","definition_xrefs":["PMID:12594517","PMID:16482161","PMID:18775698"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification","termid":"GO:0009451"},{"relation_name":"is_a","term_name":"oxidative demethylation","termid":"GO:0070989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oxidative RNA demethylation","termid":"GO:0035513"}


id: GO:0046835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group into a carbohydrate, any organic compound based on the general formula Cx(H2O)y.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"},{"relation_name":"is_a","term_name":"phosphorylation","termid":"GO:0016310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"carbohydrate phosphorylation","termid":"GO:0046835"}


id: FYPO:0003946
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[118753],"is_not":false,"summary":null,"term":"FYPO:0003946"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the site of cell division begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell division site","termid":"FYPO:0001401"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_03596":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta":{"display_name":"cdc15-A(L264P,P442T aa) mid1delta","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03596","SJAG_01143"],"name":"delayed onset of protein localization to cell division site","references_by_uniquename":{"PMID:25866389":null},"synonyms":[{"name":"delayed onset of protein localisation to cell division site","type":"exact"},{"name":"delayed onset of protein localization to cell division site during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein localization to cell division site during vegetative growth","type":"exact"},{"name":"delayed onset of protein recruitment to cell division site","type":"related"},{"name":"delayed protein localization to cell division site","type":"exact"}],"termid":"FYPO:0003946","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0003946":null}}


id: PBO:0003805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S26 (predicted)","termid":"PBO:0003805"}


id: GO:0051294
data:
  {"annotated_genes":["SJAG_00140","SJAG_02737","SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116439,96466,75904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000132"}]},"cv_name":"biological_process","definition":"Any process that set the alignment of spindle relative to other cellular structures.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of spindle localization","termid":"GO:0051293"},{"relation_name":"part_of","term_name":"establishment of cell polarity","termid":"GO:0030010"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00140":null,"SJAG_02695":null,"SJAG_02737":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007163"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0007049","GO:0007010","GO:0008150","GO:0051179","GO:0007163"],"is_obsolete":false,"name":"establishment of spindle orientation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"orienting of spindle","type":"exact"},{"name":"spindle orientation","type":"exact"}],"termid":"GO:0051294","terms_by_termid":{"GO:0000132":null}}


id: PBO:0047203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 218 member A","termid":"PBO:0047203"}


id: MONDO:0011655
data:
  {"annotated_genes":["SJAG_00490"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85789],"is_not":false,"summary":null,"term":"MONDO:0011655"}]},"cv_name":"mondo","definition":"An alveolar soft part sarcoma occurring in adults. The most common site of involvement is the extremity, particularly the deep soft tissues of the thigh.","definition_xrefs":["NCIT:C7943"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skeletal muscle cancer","termid":"MONDO:0002847"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00490":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"alveolar soft part sarcoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:61652","SCTID:404056007","NANDO:2200063","EFO:0007143","ONCOTREE:ASPS","UMLS:C0206657","OMIM:606243","DOID:4239","MESH:D018234","NORD:760","NCIT:C3750","HP:0012218","GARD:5654","ICDO:9581/3","Orphanet:163699","MedDRA:10001882","ICD9:171.9"],"synonyms":[{"name":"ASPS","type":"exact"},{"name":"adult alveolar soft Part sarcoma","type":"exact"},{"name":"adult alveolar soft part sarcoma","type":"exact"},{"name":"adult alveolar soft-Part sarcoma","type":"exact"},{"name":"alveolar soft PART sarcoma","type":"related"},{"name":"alveolar soft Part sarcoma","type":"exact"},{"name":"alveolar soft part sarcoma","type":"exact"},{"name":"alveolar soft part sarcoma (disease)","type":"exact"},{"name":"alveolar soft tissue sarcoma","type":"related"},{"name":"alveolar soft-part sarcoma","type":"exact"},{"name":"alveolar soft-tissue sarcoma","type":"related"},{"name":"childhood alveolar soft part sarcoma","type":"narrow"},{"name":"paediatric alveolar soft Part sarcoma","type":"narrow"},{"name":"pediatric alveolar soft Part sarcoma","type":"narrow"}],"termid":"MONDO:0011655","terms_by_termid":{"MONDO:0011655":null},"xrefs":{"Monarch":{"xref_id":"0011655"}}}


id: GO:2001109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lens epithelial cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"lens epithelial cell proliferation","termid":"GO:0097166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lens epithelial cell proliferation","termid":"GO:2001109"}


id: PBO:0063577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p53 apoptosis effector related to PMP22","termid":"PBO:0063577"}


id: GO:0018862
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + H+ + phosphate = CO2 + H2O + phenyl phosphate.","definition_xrefs":["RHEA:74015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"phenyl-phosphate phosphatase/carboxylase activity","secondary_identifiers":["UM-BBD_reactionID:r0157","EC:4.1.1.123","KEGG_REACTION:R05603","MetaCyc:PHENYLPCARB-RXN"],"synonyms":[{"name":"phenylphosphate carboxylase activity","type":"exact"}],"termid":"GO:0018862"}


id: PBO:0000469
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Sre1","termid":"PBO:0000469"}


id: PBO:0057807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3129","termid":"PBO:0057807"}


id: GO:0060302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the activity of a molecule that controls the survival, growth, differentiation and effector function of tissues and cells.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of cytokine activity","termid":"GO:0060300"},{"relation_name":"is_a","term_name":"negative regulation of receptor binding","termid":"GO:1900121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytokine activity","termid":"GO:0060302"}


id: GO:1900468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphatidylserine biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:8056324","PMID:8614637","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid biosynthetic process","termid":"GO:0071071"},{"relation_name":"is_a","term_name":"regulation of phosphatidylserine metabolic process","termid":"GO:0150178"},{"relation_name":"regulates","term_name":"phosphatidylserine biosynthetic process","termid":"GO:0006659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of phosphatidylserine biosynthetic process","synonyms":[{"name":"regulation of phosphatidylserine anabolism","type":"exact"},{"name":"regulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"regulation of phosphatidylserine formation","type":"exact"},{"name":"regulation of phosphatidylserine synthesis","type":"exact"}],"termid":"GO:1900468"}


id: SO:1000158
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intrachromosomal transposition whereby the segment between the first two breaks listed is removed and inserted at the third break; the insertion is in cytologically inverted orientation with respect to its flanking segments.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"has_part","term_name":"inversion","termid":"SO:1000036"},{"relation_name":"is_a","term_name":"inversion_cum_translocation","termid":"SO:1000148"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverted_intrachromosomal_transposition","synonyms":[{"name":"(Drosophila)iTp","type":"related"},{"name":"inverted intrachromosomal transposition","type":"exact"}],"termid":"SO:1000158"}


id: PBO:0042866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP97 domain containing 1","termid":"PBO:0042866"}


id: PBO:0049070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 87","termid":"PBO:0049070"}


id: MONDO:0004617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disorders characterized by hypersomnolence during normal waking hours that may impair cognitive functioning. Subtypes include primary hypersomnia disorders (e.g., idiopathic hypersomnolence; narcolepsy; and kleine-levin syndrome) and secondary hypersomnia disorders where excessive somnolence can be attributed to a known cause (e.g., drug affect, mental disorders, and sleep apnea syndrome). (From J Neurol Sci 1998 Jan 8;153(2):192-202; Thorpy, Principles and Practice of Sleep Medicine, 2nd ed, p320)","definition_xrefs":["MESH:D006970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sleep-wake disorder","termid":"MONDO:0003406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recurrent hypersomnia","secondary_identifiers":["SCTID:426451004","ICD10CM:G47.13","MEDGEN:155520","ICD9:327.13","DOID:8619","UMLS:C0751226"],"synonyms":[{"name":"primary recurrent hypersomnia","type":"exact"}],"termid":"MONDO:0004617","xrefs":{"Monarch":{"xref_id":"0004617"}}}


id: PBO:0059023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 12","termid":"PBO:0059023"}


id: GO:0045057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the physical movement of a new cis-Golgi stack from the cis-position, nearest the endoplasmic reticulum (ER), to the trans position, farthest from the ER, successively becoming first a medial-Golgi cisterna and then a trans-Golgi cisterna.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intra-Golgi vesicle-mediated transport","termid":"GO:0006891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"cisternal progression","synonyms":[{"name":"cisternal maturation","type":"exact"}],"termid":"GO:0045057"}


id: GO:0036487
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of nitric oxide synthase.","definition_xrefs":["PMID:17242280","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"nitric-oxide synthase regulator activity","termid":"GO:0030235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"}],"interesting_parent_ids":["GO:0030234","GO:0140678","GO:0003674","GO:0098772","GO:0004857"],"is_obsolete":false,"name":"nitric-oxide synthase inhibitor activity","secondary_identifiers":["Reactome:R-HSA-203712"],"synonyms":[{"name":"NOS inhibitor activity","type":"exact"},{"name":"nitric oxide synthase inhibitor activity","type":"exact"}],"termid":"GO:0036487"}


id: GO:0030714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Polarization of the follicle cells of an insect ovary along the anterior/posterior axis.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"axis specification","termid":"GO:0009798"},{"relation_name":"is_a","term_name":"establishment or maintenance of polarity of follicular epithelium","termid":"GO:0016334"},{"relation_name":"part_of","term_name":"follicle cell of egg chamber development","termid":"GO:0030707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"anterior/posterior axis specification, follicular epithelium","synonyms":[{"name":"anterior/posterior axis determination, follicular epithelium","type":"exact"}],"termid":"GO:0030714"}


id: MONDO:1011998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary open angle glaucoma, non-human animal","secondary_identifiers":["OMIA:002046"],"termid":"MONDO:1011998","xrefs":{"Monarch":{"xref_id":"1011998"}}}


id: MONDO:0000698
data:
  {"annotated_genes":["SJAG_03293","SJAG_03434","SJAG_00674"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013166"},{"annotations":[84681,84680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010083"}]},"cv_name":"mondo","definition":"An amino acid metabolic disorder characterized by impairment of the GABA catabolic pathway.","definition_xrefs":["PMID:12891648","DOID:0060176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"disorder of organic acid metabolism","termid":"MONDO:0045022"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00674":null,"SJAG_03293":null,"SJAG_03434":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"gamma-amino butyric acid metabolism disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:79175","UMLS:C4702813","GARD:18955","icd11.foundation:1811657969","MEDGEN:1842586"],"termid":"MONDO:0000698","terms_by_termid":{"MONDO:0010083":null,"MONDO:0013166":null},"xrefs":{"Monarch":{"xref_id":"0000698"}}}


id: GO:2001295
data:
  {"annotated_genes":["SJAG_03313"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97857],"is_not":false,"summary":null,"term":"GO:2001295"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of malonyl-CoA, the S-malonyl derivative of coenzyme A.","definition_xrefs":["GOC:yaf","UniPathway:UPA00655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA biosynthetic process","termid":"GO:0071616"},{"relation_name":"is_a","term_name":"malonyl-CoA metabolic process","termid":"GO:2001293"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"malonyl-CoA biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"malonyl-CoA anabolism","type":"exact"},{"name":"malonyl-CoA biosynthesis","type":"exact"},{"name":"malonyl-CoA formation","type":"exact"},{"name":"malonyl-CoA synthesis","type":"exact"}],"termid":"GO:2001295","terms_by_termid":{"GO:2001295":null}}


id: GO:0034810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4,5-dihydroxybenzo(a)pyrene + O2 = 4,5-chrysenedicarboxylate.","definition_xrefs":["UM-BBD_reactionID:r1128"],"gene_count":0,"genotype_count":0,"name":"obsolete 4,5-dihydroxybenzo(a)pyrene dioxygenase activity (obsolete GO:0034810)","termid":"GO:0034810"}


id: PBO:0041780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle associated protein 1","termid":"PBO:0041780"}


id: PBO:0043976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSAG family member 2","termid":"PBO:0043976"}


id: MONDO:0009484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the DNAI1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 1","secondary_identifiers":["DOID:0110594","UMLS:C4551906","OMIM:244400","Orphanet:98861","MEDGEN:1646059","NCIT:C128117"],"synonyms":[{"name":"CILD1","type":"exact"},{"name":"DNAI1 primary ciliary dyskinesia","type":"exact"},{"name":"Kartagener syndrome","type":"related"},{"name":"PCD","type":"related"},{"name":"Polynesian bronchiectasis","type":"related"},{"name":"Siewert syndrome","type":"related"},{"name":"ciliary dyskinesia, primary, 1","type":"related"},{"name":"ciliary dyskinesia, primary, 1, with or without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 1","type":"exact"},{"name":"dextrocardia, bronchiectasis, and sinusitis","type":"related"},{"name":"immotile cilia syndrome","type":"related"},{"name":"primary ciliary dyskinesia 1","type":"exact"},{"name":"primary ciliary dyskinesia 1 with or without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in DNAI1","type":"exact"},{"name":"primary ciliary dyskinesia type 1","type":"exact"}],"termid":"MONDO:0009484","xrefs":{"Monarch":{"xref_id":"0009484"}}}


id: PBO:0040633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BarH like homeobox 2","termid":"PBO:0040633"}


id: PBO:0088952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2406 family conserved fungal protein","termid":"PBO:0088952"}


id: GO:0032645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of granulocyte macrophage colony-stimulating factor production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"regulates","term_name":"granulocyte macrophage colony-stimulating factor production","termid":"GO:0032604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of granulocyte macrophage colony-stimulating factor production","secondary_identifiers":["GO:0045423"],"synonyms":[{"name":"regulation of GM-CSF production","type":"exact"},{"name":"regulation of granulocyte macrophage colony stimulating factor production","type":"exact"},{"name":"regulation of granulocyte macrophage colony-stimulating factor biosynthetic process","type":"narrow"}],"termid":"GO:0032645"}


id: PBO:0031398
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_conjugation","termid":"PBO:0031398"}


id: GO:0150111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transepithelial transport.","definition_xrefs":["PMID:27593915","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"transepithelial transport","termid":"GO:0070633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of transepithelial transport","termid":"GO:0150111"}


id: MONDO:0001488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal deposit","termid":"MONDO:0001308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"anterior corneal pigmentation","secondary_identifiers":["DOID:12307","ICD9:371.11","SCTID:18377001","UMLS:C0155104","MEDGEN:509790"],"synonyms":[{"name":"anterior corneal pigmentations","type":"exact"}],"termid":"MONDO:0001488","xrefs":{"Monarch":{"xref_id":"0001488"}}}


id: GO:0062248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of producing a cleistothecium, a closed sexual fruiting body that contains ascospores in linear asci. Cleistothecia are present in some filamentous Ascomycete fungi such as members of the genera Aspergillus and Emericella.","definition_xrefs":["PMID:20348388","PMID:28889020","PMID:30410052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"cleistothecium development","termid":"GO:0070791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cleistothecium formation","termid":"GO:0062248"}


id: PR:O74965
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 2A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13227:SF5","OMA:SCHPO03697"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.04","secondary_identifiers":["UniProtKB:O74965"],"synonyms":[{"name":"Spom972h-EIF2A","type":"exact"},{"name":"eIF-2A (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74965"}


id: PATO:0002311
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Having a fringe or border of hairlike or fingerlike projections.","definition_xrefs":["PATO:WS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fimbriated","termid":"PATO:0002311"}


id: GO:0110144
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a magnetosome, a membrane-bound organelle that envelops particles of magnetic iron minerals in magnetotactic bacteria.","definition_xrefs":["GOC:aa","PMID:27620945"],"gene_count":0,"genotype_count":0,"name":"obsolete magnetosome part (obsolete GO:0110144)","termid":"GO:0110144"}


id: GO:0010808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of synaptic vesicle priming. Synaptic vesicle priming is the formation of SNARE-containing complexes, bringing synaptic vesicle membrane and plasma membranes into close proximity and thereby facilitating membrane fusion.","definition_xrefs":["GOC:dph","GOC:kmv","GOC:tb","PMID:15489511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic vesicle priming","termid":"GO:0010807"},{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"positively_regulates","term_name":"synaptic vesicle priming","termid":"GO:0016082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of synaptic vesicle priming","termid":"GO:0010808"}


id: PBO:0027327
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_surface_pyruvylated_galactose_level","termid":"PBO:0027327"}


id: PBO:0062016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily L member 6 pseudogene","termid":"PBO:0062016"}


id: GO:0099108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Activation potassium ion channel activity via direct interaction with a potassium ion channel during G protein-coupled receptor signaling.","definition_xrefs":["PMID:9429760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel activator activity","termid":"GO:0099104"},{"relation_name":"is_a","term_name":"ion channel regulator activity involved in G protein-coupled receptor signaling pathway","termid":"GO:0099107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0140677","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"potassium channel activator activity involved in G protein-coupled receptor signaling pathway","synonyms":[{"name":"potassium channel activator activity involved in G-protein coupled receptor signaling pathway","type":"exact"}],"termid":"GO:0099108"}


id: GO:0055025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of cardiac muscle tissue development.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of striated muscle tissue development","termid":"GO:0045844"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle tissue development","termid":"GO:0055024"},{"relation_name":"positively_regulates","term_name":"cardiac muscle tissue development","termid":"GO:0048738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle tissue development","synonyms":[{"name":"activation of cardiac muscle development","type":"narrow"},{"name":"positive regulation of heart muscle development","type":"exact"},{"name":"stimulation of cardiac muscle development","type":"narrow"},{"name":"up regulation of cardiac muscle development","type":"exact"},{"name":"up-regulation of cardiac muscle development","type":"exact"},{"name":"upregulation of cardiac muscle development","type":"exact"}],"termid":"GO:0055025"}


id: GO:0006303
data:
  {"annotated_genes":["SJAG_00640","SJAG_16460","SJAG_01076","SJAG_04372","SJAG_01677","SJAG_02527","SJAG_04199","SJAG_05373","SJAG_02237","SJAG_00441","SJAG_05372","SJAG_00823","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88019,88640,95362,99438,104520,110436,111220,113777,115824,116295],"is_not":false,"summary":null,"term":"GO:0006303"},{"annotations":[113385,115823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097680"},{"annotations":[95364],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061674"},{"annotations":[101867],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2001033"},{"annotations":[106896],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2001034"}]},"cv_name":"biological_process","definition":"The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends. This term covers instances of separate pathways, called classical (or canonical) and alternative nonhomologous end joining (C-NHEJ and A-NHEJ). These in turn may further branch into sub-pathways, but evidence is still unclear.","definition_xrefs":["PMID:24837021","PMID:10827453","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-strand break repair","termid":"GO:0006302"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00441":null,"SJAG_00640":null,"SJAG_00823":null,"SJAG_01076":null,"SJAG_01677":null,"SJAG_02237":null,"SJAG_02527":null,"SJAG_03048":null,"SJAG_04199":null,"SJAG_04372":null,"SJAG_05372":null,"SJAG_05373":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"double-strand break repair via nonhomologous end joining","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5693571"],"synonyms":[{"name":"NHEJ","type":"exact"}],"termid":"GO:0006303","terms_by_termid":{"GO:0006303":null,"GO:0061674":null,"GO:0097680":null,"GO:2001033":null,"GO:2001034":null}}


id: PBO:0041633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA1C antisense RNA 3","termid":"PBO:0041633"}


id: PBO:0061697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear protein 1, transcriptional regulator","termid":"PBO:0061697"}


id: PBO:0000172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Rad8","termid":"PBO:0000172"}


id: MONDO:0015275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Partial atrioventricular canal (PAVC) is a congenital heart malformation characterized by an atrial septal defect (ASD; ostium primum), clefts of mitral and occasionally tricuspid valves, two separate atrioventricular (AV) valve annuli and an intact ventricular septum. The typical symptoms of PAVC are impaired exercise capacity and exertional dyspnea.","definition_xrefs":["Orphanet:1330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrioventricular septal defect","termid":"MONDO:0020290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"partial atrioventricular canal","secondary_identifiers":["MEDGEN:868879","GARD:4229","MESH:C536112","SCTID:718216009","NANDO:2200268","UMLS:C4023290"],"synonyms":[{"name":"PAVC","type":"exact"},{"name":"partial AVSD","type":"related"},{"name":"partial atrioventricular canal defect","type":"exact"},{"name":"partial atrioventricular septal defects","type":"related"},{"name":"partial common atrioventricular canal","type":"related"}],"termid":"MONDO:0015275","xrefs":{"Monarch":{"xref_id":"0015275"}}}


id: PBO:0026974
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_level_of_substance_in_mitochondrion","termid":"PBO:0026974"}


id: GO:0090159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sphingolipids that contributes to endoplasmic reticulum membrane organization.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid biosynthetic process","termid":"GO:0030148"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane organization","termid":"GO:0090158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0006629"],"is_obsolete":false,"name":"sphingolipid biosynthesis involved in endoplasmic reticulum membrane organization","synonyms":[{"name":"sphingolipid biosynthesis involved in endoplasmic reticulum membrane organisation","type":"exact"}],"termid":"GO:0090159"}


id: GO:0018108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine.","definition_xrefs":["RESID:AA0039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylation","termid":"GO:0006468"},{"relation_name":"is_a","term_name":"peptidyl-tyrosine modification","termid":"GO:0018212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-tyrosine phosphorylation","termid":"GO:0018108"}


id: PBO:0065456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 3","termid":"PBO:0065456"}


id: MONDO:0020048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Internal carotid artery (ICA) agenesis (uni or bilateral) is a developmental defect that may be asymptomatic or lead to cerebrovascular lesions. It is a rare malformation, with only around hundred cases reported in the literature. When symptoms are present, they are caused by cerebrovascular insufficiency, compression of the brain by vessels that dilate to compensate for the absence of the ICA, or the presence of an aneurysm. Associated intracranial aneurysms occur in 25 to 35% of patients and are often responsible for intracranial hemorrhage, which may present as the initial symptom. The absence of the ICA is the result of either agenesis or aplasia. The term agenesis is used when both the ICA and its bony canal are absent, whereas there is some evidence of carotid canals in cases of aplasia. The absence of the ICA can be detected by angiography or by computerized tomography.","definition_xrefs":["Orphanet:981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal carotid agenesis","secondary_identifiers":["MEDGEN:928576","icd11.foundation:368564890","SCTID:722004001","UMLS:C4302907","GARD:3012"],"synonyms":[{"name":"agenesis of the internal carotid artery","type":"related"},{"name":"internal carotid artery agenesis","type":"related"}],"termid":"MONDO:0020048","xrefs":{"Monarch":{"xref_id":"0020048"}}}


id: PBO:0077981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon TGC) 3-2","termid":"PBO:0077981"}


id: PBO:0077516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM231 pseudogene 1","termid":"PBO:0077516"}


id: PBO:0041747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAMTA1 divergent transcript","termid":"PBO:0041747"}


id: GO:0140512
data:
  {"annotated_genes":["SJAG_03200","SJAG_01745","SJAG_04578","SJAG_01584","SJAG_01374","SJAG_04148","SJAG_04284","SJAG_03729"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89601,115909],"is_not":false,"summary":null,"term":"GO:0140512"},{"annotations":[89602,90815,90425,109948,109914,95607,115910,115534],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140599"}]},"cv_name":"cellular_component","definition":"The central region of a mitotic nuclear bridge, distal to the main portions of the daughter nuclei.","definition_xrefs":["PMID:32848252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitotic nuclear bridge","termid":"GO:0140510"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01374":null,"SJAG_01584":null,"SJAG_01745":null,"SJAG_03200":null,"SJAG_03729":null,"SJAG_04148":null,"SJAG_04284":null,"SJAG_04578":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"mitotic nuclear bridge midzone","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140512","terms_by_termid":{"GO:0140512":null,"GO:0140599":null}}


id: GO:0140271
data:
  {"annotated_genes":["SJAG_03608","SJAG_00057"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113670,116706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098708"},{"annotations":[110137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140425"}]},"cv_name":"biological_process","definition":"The directed movement of hexose from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:10735857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transport","termid":"GO:0008645"},{"relation_name":"is_a","term_name":"carbohydrate import across plasma membrane","termid":"GO:0098704"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"hexose import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140271","terms_by_termid":{"GO:0098708":null,"GO:0140425":null}}


id: PBO:0051994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctional adhesion molecule 2","termid":"PBO:0051994"}


id: GO:0097186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the formation of tooth enamel, occurring in two stages: secretory stage and maturation stage.","definition_xrefs":["GOC:cjm","PMID:10206335","PMID:21196346","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odontogenesis of dentin-containing tooth","termid":"GO:0042475"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amelogenesis","synonyms":[{"name":"enamel development","type":"exact"}],"termid":"GO:0097186"}


id: PBO:0069988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1283, pseudogene","termid":"PBO:0069988"}


id: PBO:0070678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 49","termid":"PBO:0070678"}


id: GO:1900007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of extrachromosomal rDNA circle accumulation involved in replicative cell aging.","definition_xrefs":["PMID:15020466","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of extrachromosomal rDNA circle accumulation involved in replicative cell aging (obsolete GO:1900007)","synonyms":[{"name":"regulation of extrachromosomal rDNA circle accumulation during replicative cell ageing","type":"related"},{"name":"regulation of extrachromosomal rDNA circle accumulation during replicative cell aging","type":"related"},{"name":"regulation of extrachromosomal ribosomal DNA circle accumulation during replicative cell aging","type":"related"}],"termid":"GO:1900007"}


id: PBO:0002337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A beta","termid":"PBO:0002337"}


id: PBO:0052895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 10-6","termid":"PBO:0052895"}


id: GO:0016111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving polyterpenoid compounds, terpenoids with more than eight isoprene units.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"polyterpenoid metabolic process","synonyms":[{"name":"polyterpene metabolic process","type":"narrow"},{"name":"polyterpene metabolism","type":"narrow"},{"name":"polyterpenoid metabolism","type":"exact"}],"termid":"GO:0016111"}


id: MONDO:0006817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low grade malignant bone-forming mesenchymal neoplasm arising from the surface of the bone. It usually affects the distal posterior femur, the proximal tibia, and proximal humerus. Painless swelling is the usual clinical sign. Most patients are young adults and the prognosis is usually excellent.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral osteosarcoma","termid":"MONDO:0002628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"juxtacortical osteosarcoma","secondary_identifiers":["NCIT:C8969","ONCOTREE:PAOS","UMLS:C0206642","EFO:1001000","ICDO:9192/3","MEDGEN:60197","MESH:D018217","DOID:3373"],"synonyms":[{"name":"PAOS","type":"related"},{"name":"juxtacortical osteogenic sarcoma","type":"exact"},{"name":"juxtacortical osteosarcoma","type":"exact"},{"name":"parosteal osteogenic sarcoma","type":"exact"},{"name":"parosteal osteosarcoma","type":"exact"}],"termid":"MONDO:0006817","xrefs":{"Monarch":{"xref_id":"0006817"}}}


id: PBO:0074538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNCA antisense RNA 1","termid":"PBO:0074538"}


id: MONDO:0016463
data:
  {"annotated_genes":["SJAG_02208","SJAG_02330"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85587,85586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958013"}]},"cv_name":"mondo","definition":"A agammaglobulinemia that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"agammaglobulinemia","termid":"MONDO:0015977"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02208":null,"SJAG_02330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"syndromic agammaglobulinemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5680904","Orphanet:229720","GARD:20596","MEDGEN:1843258","NCIT:C26931"],"synonyms":[{"name":"hypogammaglobulinemia","type":"broad"},{"name":"syndrome associated with agammaglobulinemia","type":"exact"},{"name":"syndromic agammaglobulinemia","type":"exact"},{"name":"syndromic hypogammaglobulinemia","type":"exact"}],"termid":"MONDO:0016463","terms_by_termid":{"MONDO:0958013":null},"xrefs":{"Monarch":{"xref_id":"0016463"}}}


id: GO:0019578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of aldaric acid, any dicarboxylic acid formed by oxidation of by the terminal groups of an aldose to carboxyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldaric acid metabolic process","termid":"GO:0019577"},{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"aldaric acid biosynthetic process","synonyms":[{"name":"aldaric acid anabolism","type":"exact"},{"name":"aldaric acid biosynthesis","type":"exact"},{"name":"aldaric acid formation","type":"exact"},{"name":"aldaric acid synthesis","type":"exact"}],"termid":"GO:0019578"}


id: MOD:01511
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Applied Biosystems iTRAQ4plex-117 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-117, mTRAQ heavy, reporter+balance reagent acylated residue","termid":"MOD:01506"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent O-acylated residue","termid":"MOD:01713"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-117 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex","type":"related"}],"termid":"MOD:01511"}


id: PBO:0062215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AL member 2 pseudogene","termid":"PBO:0062215"}


id: GO:0110029
data:
  {"annotated_genes":["SJAG_01082","SJAG_04259","SJAG_03327","SJAG_01330"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105807,113993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[113280],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[100834],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of meiosis I, a cell cycle process comprising the steps by which a cell progresses through the first phase of meiosis, in which cells divide and homologous chromosomes are paired and segregated from each other, producing two daughter cells.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of meiotic nuclear division","termid":"GO:0045835"},{"relation_name":"is_a","term_name":"regulation of meiosis I","termid":"GO:0060631"},{"relation_name":"negatively_regulates","term_name":"meiosis I","termid":"GO:0007127"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_01330":null,"SJAG_03327":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0140013"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0140013","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of meiosis I","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110029","terms_by_termid":{"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: GO:0097691
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Small membrane vesicle (< 1 um) that buds off a prokaryotic cell plasma membrane, able to carry proteins, phospholipids, lipopolysaccharides, nucleic acids, viruses, and more. Important in intercellular communication and pathogenesis; can exist within host cells.","definition_xrefs":["GOC:aa","PMID:25704309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular vesicle","termid":"GO:1903561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"bacterial extracellular vesicle","termid":"GO:0097691"}


id: PBO:0072312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S25 pseudogene 9","termid":"PBO:0072312"}


id: GO:0034016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-cis-icosa-5,8,11,14,17-pentaenoate = (5Z,7E,9E,14Z,17Z)-icosapentaenoate.","definition_xrefs":["RHEA:14889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"polyenoic fatty acid isomerase activity","secondary_identifiers":["KEGG_REACTION:R06502","EC:5.3.3.13","MetaCyc:5.3.3.13-RXN"],"synonyms":[{"name":"(5Z,8Z,11Z,14Z,17Z)-eicosapentaenoate delta8,11-delta7,8-isomerase activity","type":"related"},{"name":"(5Z,8Z,11Z,14Z,17Z)-eicosapentaenoate delta8,11-delta7,9-isomerase (trans-double-bond-forming) activity","type":"related"},{"name":"(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate delta8,11-delta7,9-isomerase (trans-double-bond-forming) activity","type":"related"},{"name":"PFI","type":"related"},{"name":"eicosapentaenoate cis-delta5,8,11,14,17-eicosapentaenoate cis-delta5-trans-delta7,9-cis-delta14,17 isomerase activity","type":"related"}],"termid":"GO:0034016"}


id: GO:0072106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the developmental process pertaining to the initial formation of the ureteric bud from the Wolffian duct.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesonephros development","termid":"GO:0061217"},{"relation_name":"is_a","term_name":"regulation of epithelial tube formation","termid":"GO:1905276"},{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"ureteric bud formation","termid":"GO:0060676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ureteric bud formation","termid":"GO:0072106"}


id: MONDO:0018845
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Focal myositis is a rare inflammatory myopathy characterized by a localized swelling of skeletal muscle that is usually located in the lower extremities.","definition_xrefs":["Orphanet:48918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired idiopathic inflammatory myopathy","termid":"MONDO:0020122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"focal myositis","secondary_identifiers":["ICD9:729.1","icd11.foundation:708931518","MEDGEN:592748","GARD:18837","UMLS:C0409988","SCTID:240119009"],"synonyms":[{"name":"focal nodular myositis","type":"exact"},{"name":"inflammatory pseudotumor of skeletal muscle","type":"exact"}],"termid":"MONDO:0018845","xrefs":{"Monarch":{"xref_id":"0018845"}}}


id: MONDO:0019920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paternal uniparental disomy of chromosome 5 is an uniparental disomy of paternal origin that most likely does not have any phenotypic expression except from cases of homozygosity for a recessive disease mutation for which only father is a carrier.","definition_xrefs":["Orphanet:96190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 5 disorder","termid":"MONDO:0700012"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternal uniparental disomy of chromosome 5","secondary_identifiers":["icd11.foundation:1224981751","UMLS:C4749377","MEDGEN:1652849","GARD:19339"],"synonyms":[{"name":"UPD(5)pat","type":"exact"},{"name":"paternal uniparental disomy of chromosome type 5","type":"exact"}],"termid":"MONDO:0019920","xrefs":{"Monarch":{"xref_id":"0019920"}}}


id: PR:Q9Y7J5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1778.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7J5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC domain-containing protein C1778.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1778.09","synonyms":[{"name":"Spom972h-SPBC1778.09","type":"exact"}],"termid":"PR:Q9Y7J5"}


id: PBO:0027201
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_nuclear_microtubules_protruding_through_nuclear_envelope_during_interphase","termid":"PBO:0027201"}


id: PATO:0000233
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000233 touch (obsolete PATO:0000233)","termid":"PATO:0000233"}


id: PBO:0091781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dubious protein, reverse strand of sno20","termid":"PBO:0091781"}


id: MONDO:1011795
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"masticatory muscle myositis, non-human animal","secondary_identifiers":["OMIA:001134"],"termid":"MONDO:1011795","xrefs":{"Monarch":{"xref_id":"1011795"}}}


id: FYPO:0002611
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a lower extent than normal at subtelomeric regions during S phase of the mitotic cell cycle. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0001320","FYPO:0002494","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone H2A phosphorylation at subtelomeric heterochromatin during mitotic S phase","synonyms":[{"name":"decreased histone H2A phosphorylation at subtelomere during mitotic S phase","type":"exact"},{"name":"decreased histone H2A phosphorylation at subtelomeric heterochromatin during S phase during vegetative growth","type":"exact"},{"name":"reduced histone H2A phosphorylation at subtelomeric heterochromatin during mitotic S phase","type":"exact"}],"termid":"FYPO:0002611"}


id: PBO:0077738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tenascin XA (pseudogene)","termid":"PBO:0077738"}


id: PBO:0000571
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.62","termid":"PBO:0000571"}


id: PBO:0079433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma 2","termid":"PBO:0079433"}


id: MONDO:0006193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Simple or complex endometrial hyperplasia characterized by the absence of epithelial atypia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperplasia","termid":"MONDO:0005043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endometrial hyperplasia without atypia","secondary_identifiers":["ICD9:621.34","NCIT:C40157","MEDGEN:274011","EFO:1000234","SCTID:134031000119108","UMLS:C1516855"],"synonyms":[{"name":"typical endometrial hyperplasia","type":"exact"}],"termid":"MONDO:0006193","xrefs":{"Monarch":{"xref_id":"0006193"}}}


id: GO:0004583
data:
  {"annotated_genes":["SJAG_01950","SJAG_03656"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042283"},{"annotations":[108782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042281"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an alpha-D-glucosyl residue from dolichyl-phosphate D-glucose into a membrane lipid-linked oligosaccharide.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01950":null,"SJAG_03656":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-446202","Reactome:R-HSA-4724291","Reactome:R-HSA-446194","Reactome:R-HSA-4724330","MetaCyc:RXN-5472","Reactome:R-HSA-446189"],"termid":"GO:0004583","terms_by_termid":{"GO:0042281":null,"GO:0042283":null}}


id: GO:0007142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process comprising the steps by which a cell progresses through male meiosis II, the second meiotic division in the male germline.","definition_xrefs":["GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis II","termid":"GO:0007135"},{"relation_name":"is_a","term_name":"male meiotic nuclear division","termid":"GO:0007140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140013","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"male meiosis II","synonyms":[{"name":"male meiosis II nuclear division","type":"exact"}],"termid":"GO:0007142"}


id: PBO:0072228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 3","termid":"PBO:0072228"}


id: PBO:0039338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaline phosphatase, placental","termid":"PBO:0039338"}


id: PBO:0047030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 95 member A","termid":"PBO:0047030"}


id: GO:0010947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of meiotic joint molecule formation. Meiotic joint molecule formation is the conversion of the paired broken DNA and homologous duplex DNA into a four-stranded branched intermediate, known as a joint molecule, formed during meiotic recombination.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of meiotic joint molecule formation","termid":"GO:0010946"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"meiotic joint molecule formation","termid":"GO:0000709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of meiotic joint molecule formation","termid":"GO:0010947"}


id: MONDO:0020034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of respiratory tract neoplasm that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare respiratory tract neoplasm (obsolete MONDO:0020034)","secondary_identifiers":["Orphanet:98060"],"synonyms":[{"name":"rare respiratory cancer","type":"narrow"},{"name":"rare respiratory neoplasm","type":"exact"},{"name":"rare respiratory tract neoplasm","type":"exact"},{"name":"rare respiratory tumor","type":"exact"}],"termid":"MONDO:0020034","xrefs":{"Monarch":{"xref_id":"0020034"}}}


id: PBO:0067982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 284","termid":"PBO:0067982"}


id: PBO:0055972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and IQ motif containing 1","termid":"PBO:0055972"}


id: GO:0060161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the dopamine receptor protein signaling pathway. A dopamine receptor signaling pathway is the series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045745"},{"relation_name":"is_a","term_name":"regulation of dopamine receptor signaling pathway","termid":"GO:0060159"},{"relation_name":"positively_regulates","term_name":"G protein-coupled dopamine receptor signaling pathway","termid":"GO:0007212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of dopamine receptor signaling pathway","synonyms":[{"name":"positive regulation of dopamine receptor signalling pathway","type":"exact"}],"termid":"GO:0060161"}


id: GO:1903889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of plant epidermal cell differentiation.","definition_xrefs":["PMID:123345","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of plant epidermal cell differentiation","termid":"GO:1903888"},{"relation_name":"negatively_regulates","term_name":"plant epidermal cell differentiation","termid":"GO:0090627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of plant epidermal cell differentiation","synonyms":[{"name":"down regulation of plant epidermal cell differentiation","type":"exact"},{"name":"down-regulation of plant epidermal cell differentiation","type":"exact"},{"name":"downregulation of plant epidermal cell differentiation","type":"exact"},{"name":"inhibition of plant epidermal cell differentiation","type":"narrow"}],"termid":"GO:1903889"}


id: GO:0016300
data:
  {"annotated_genes":["SJAG_04736","SJAG_03367","SJAG_02042"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106335"},{"annotations":[97570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030697"},{"annotations":[117470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141101"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from a donor to a uracil residue in a tRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methyltransferase activity","termid":"GO:0008175"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02042":null,"SJAG_03367":null,"SJAG_04736":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0140098","GO:0016740","GO:0003824","GO:0140101","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"tRNA (uridine) methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0016431"],"synonyms":[{"name":"tRNA (uracil) methyltransferase activity","type":"exact"}],"termid":"GO:0016300","terms_by_termid":{"GO:0030697":null,"GO:0106335":null,"GO:0141101":null}}


id: MONDO:0006139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Metaplastic changes in the cervical glandular or squamous epithelium.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cervical adenocarcinoma","termid":"MONDO:0005153"},{"relation_name":"is_a","term_name":"cervix disorder","termid":"MONDO:0002256"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical metaplasia","secondary_identifiers":["UMLS:C0281796","EFO:1000168","MEDGEN:129096"],"termid":"MONDO:0006139","xrefs":{"Monarch":{"xref_id":"0006139"}}}


id: PBO:0034437
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_diglyceride_level","termid":"PBO:0034437"}


id: PBO:0087016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribonucleotide-diphosphate reductase (RNR), small subunit; the RNR complex catalyzes the rate-limiting step in dNTP synthesis and is regulated by DNA replication and DNA damage checkpoint pathways via localization of the small subunits; RNR2 has a paralog, RNR4, that arose from the whole genome duplication","termid":"PBO:0087016"}


id: GO:0036430
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + CMP = ADP + CDP.","definition_xrefs":["RHEA:11600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(d)CMP kinase activity","termid":"GO:0004127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"CMP kinase activity","secondary_identifiers":["KEGG_REACTION:R00512","MetaCyc:RXN-11832"],"termid":"GO:0036430"}


id: MONDO:0020754
data:
  {"annotated_genes":["SJAG_03145","SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86229],"is_not":false,"summary":null,"term":"MONDO:0020754"},{"annotations":[86028,86029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859157"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03145":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"visceral myopathy 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5542197","OMIM:155310","MEDGEN:1785391"],"synonyms":[{"name":"VSCM","type":"related"},{"name":"infantile visceral myopathy","type":"related"},{"name":"megaduodenum and/or megacystis","type":"related"},{"name":"pseudoobstruction, idiopathic intestinal","type":"related"},{"name":"visceral myopathy","type":"exact"},{"name":"visceral myopathy 1","type":"exact"}],"termid":"MONDO:0020754","terms_by_termid":{"MONDO:0020754":null,"MONDO:0859157":null},"xrefs":{"Monarch":{"xref_id":"0020754"}}}


id: PBO:0057318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 518e","termid":"PBO:0057318"}


id: PBO:0076252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptic vesicle glycoprotein 2A","termid":"PBO:0076252"}


id: PBO:0073418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"senataxin","termid":"PBO:0073418"}


id: PBO:0061266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notum, palmitoleoyl-protein carboxylesterase","termid":"PBO:0061266"}


id: SO:0000364
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of sequence surrounding a transposable element.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flanking_region","termid":"SO:0000239"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposable_element_flanking_region","synonyms":[{"name":"transposable element flanking region","type":"exact"}],"termid":"SO:0000364"}


id: MONDO:0000844
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spondyloepimetaphyseal dysplasia (obsolete MONDO:0000844)","termid":"MONDO:0000844","xrefs":{"Monarch":{"xref_id":"0000844"}}}


id: GO:0021523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of somatic motor neurons. Somatic motor neurons innervate skeletal muscle targets and are responsible for transmission of motor impulses from the brain to the periphery. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:jid","PMID:11262869","GO_REF:0000021","GOC:cls","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal cord motor neuron differentiation","termid":"GO:0021522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic motor neuron differentiation","termid":"GO:0021523"}


id: PBO:0000992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tf2-type transposon","termid":"PBO:0000992"}


id: PBO:0077196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 4 L six family member 1","termid":"PBO:0077196"}


id: PBO:0058918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA let-7a-1","termid":"PBO:0058918"}


id: GO:1900223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of amyloid-beta clearance.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of amyloid-beta clearance","termid":"GO:1900221"},{"relation_name":"positively_regulates","term_name":"amyloid-beta clearance","termid":"GO:0097242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amyloid-beta clearance","synonyms":[{"name":"activation of beta-amyloid clearance","type":"narrow"},{"name":"positive regulation of beta-amyloid clearance","type":"exact"},{"name":"up regulation of beta-amyloid clearance","type":"exact"},{"name":"up-regulation of beta-amyloid clearance","type":"exact"},{"name":"upregulation of beta-amyloid clearance","type":"exact"}],"termid":"GO:1900223"}


id: PBO:0013042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear exosome-associated RNA binding protein Mpp6","termid":"PBO:0013042"}


id: PBO:0001481
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.26","termid":"PBO:0001481"}


id: MONDO:0042497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Poisoning caused by the ingestion of mycotoxins (toxins of fungal origin).","definition_xrefs":["MESH:D015651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"},{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mycotoxicosis","secondary_identifiers":["SCTID:26033009"],"synonyms":[{"name":"Fungi caused poisoning","type":"exact"},{"name":"Fungi poisoning","type":"exact"},{"name":"Mycotoxicoses","type":"related"},{"name":"Poisonings, fungus","type":"related"},{"name":"fungus Poisonings","type":"related"},{"name":"fungus poisoning","type":"related"},{"name":"poisoning, fungus","type":"related"}],"termid":"MONDO:0042497","xrefs":{"Monarch":{"xref_id":"0042497"}}}


id: GO:1901145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mesenchymal cell apoptotic process that is involved in nephron morphogenesis.","definition_xrefs":["GOC:mtg_apoptosis","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"},{"relation_name":"is_a","term_name":"mesenchymal cell apoptotic process","termid":"GO:0097152"},{"relation_name":"part_of","term_name":"nephron morphogenesis","termid":"GO:0072028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:1901145"}


id: PR:O14018
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine--tRNA ligase, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02129","PRO:DNx","PANTHER:PTHR11778:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine--tRNA ligase, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.15","secondary_identifiers":["UniProtKB:O14018"],"synonyms":[{"name":"SerRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SARS","type":"exact"},{"name":"seryl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"seryl-tRNA(Ser/Sec) synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14018"}


id: MONDO:0014713
data:
  {"annotated_genes":["SJAG_03352","SJAG_00580"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85497,85498],"is_not":false,"summary":null,"term":"MONDO:0014713"}]},"cv_name":"mondo","definition":"Any porokeratosis (disease) in which the cause of the disease is a mutation in the FDPS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disseminated superficial actinic porokeratosis","termid":"MONDO:0019212"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00580":null,"SJAG_03352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"porokeratosis 9, multiple types","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616631","MEDGEN:894586","UMLS:C4225262","GARD:16146"],"synonyms":[{"name":"FDPS porokeratosis (disease)","type":"exact"},{"name":"POROK9","type":"exact"},{"name":"porokeratosis (disease) caused by mutation in FDPS","type":"exact"},{"name":"porokeratosis 9, multiple types","type":"exact"},{"name":"porokeratosis 9, multiple types; POROK9","type":"exact"}],"termid":"MONDO:0014713","terms_by_termid":{"MONDO:0014713":null},"xrefs":{"Monarch":{"xref_id":"0014713"}}}


id: PBO:0046230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 23","termid":"PBO:0046230"}


id: GO:0034780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: glyphosate + OH- = glyoxylate + aminomethylphosphonic acid + H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete glyphosate dehydrogenase activity (obsolete GO:0034780)","termid":"GO:0034780"}


id: MONDO:0013453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Leber congenital amaurosis in which the cause of the disease is a mutation in the CRB1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Leber congenital amaurosis","termid":"MONDO:0018998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"Leber congenital amaurosis 8","secondary_identifiers":["UMLS:C3151202","GARD:10881","DOID:0110079","ICD10CM:H35.5","MEDGEN:462552","OMIM:613835"],"synonyms":[{"name":"CRB1 Leber congenital amaurosis","type":"exact"},{"name":"LCA8","type":"exact"},{"name":"Leber congenital amaurosis 8","type":"exact"},{"name":"Leber congenital amaurosis caused by mutation in CRB1","type":"exact"},{"name":"Leber congenital amaurosis type 8","type":"exact"}],"termid":"MONDO:0013453","xrefs":{"Monarch":{"xref_id":"0013453"}}}


id: PBO:0063198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated transcript 29","termid":"PBO:0063198"}


id: PBO:0002958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FEN-1 endonuclease Rad2","termid":"PBO:0002958"}


id: PBO:0074436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 36","termid":"PBO:0074436"}


id: MOD:00768
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Oxidation of methionine to methionine sulfone with neutral loss of CH3SO2H.","definition_xrefs":["PubMed:18688235","PubMed:9004526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue with a secondary neutral loss","termid":"MOD:00431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine oxidation with neutral loss of 80 Da","termid":"MOD:00768"}


id: PBO:0078304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (anticodon GTC) 2-9","termid":"PBO:0078304"}


id: MONDO:0024609
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive squamous cell carcinoma arising from the vulva. Risk factors include the human papilloma virus and cigarette smoking. Precursor lesions include the vulvar intraepithelial neoplasia, lichen sclerosus with associated squamous cell hyperplasia, and chronic granulomatous vulvar disease such as granuloma inguinale. Symptoms include vulvar pruritus or irritation, discharge, bleeding, and pain. The following morphologic variants have been identified: keratinizing, non-keratinizing, basaloid, warty, verrucous, keratoacanthoma-like, and squamous cell carcinoma with tumor giant cells. Risk factors for recurrence include advanced stage, tumor diameter greater than 2.5 cm, multifocality, capillary-like space involvement, associated vulvar intraepithelial neoplasia grades 2 or 3, and margins of resection involved by tumor. (WHO, 2003)","definition_xrefs":["NCIT:C4052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar squamous neoplasm","termid":"MONDO:0002195"},{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"vulvar carcinoma","termid":"MONDO:0005215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vulvar squamous cell carcinoma","secondary_identifiers":["icd11.foundation:146824338","EFO:1000624","MEDGEN:79201","GARD:22005","Orphanet:494448","SCTID:254895003","DOID:2101","UMLS:C0280856"],"synonyms":[{"name":"epidermoid carcinoma of the vulva","type":"exact"},{"name":"epidermoid carcinoma of vulva","type":"exact"},{"name":"epidermoid cell carcinoma of the vulva","type":"exact"},{"name":"epidermoid cell carcinoma of vulva","type":"exact"},{"name":"mammalian vulva squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of the vulva","type":"exact"},{"name":"squamous cell carcinoma of vulva","type":"exact"},{"name":"vulva epidermoid carcinoma","type":"exact"},{"name":"vulva epidermoid cell carcinoma","type":"exact"},{"name":"vulva squamous cell carcinoma","type":"exact"},{"name":"vulvar epidermoid carcinoma","type":"exact"},{"name":"vulvar epidermoid cell carcinoma","type":"exact"},{"name":"vulvar squamous cell cancer","type":"exact"},{"name":"vulvar squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0024609","xrefs":{"Monarch":{"xref_id":"0024609"}}}


id: GO:0042885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of microcin B17, a bactericidal peptide (antibiotic) produced by some enteric bacteria, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl","PMID:11292337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microcin transport","termid":"GO:0042884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"microcin B17 transport","termid":"GO:0042885"}


id: MONDO:0033810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anterior segment dysgenesis","termid":"MONDO:0019503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated iridoschisis","secondary_identifiers":["GARD:22125","icd11.foundation:1870961422","UMLS:C0154919","MEDGEN:509720","Orphanet:519392"],"termid":"MONDO:0033810","xrefs":{"Monarch":{"xref_id":"0033810"}}}


id: FYPO:0004073
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of cell cycle arrest in response to a pheromone occurs in G1 phase, but begins only after the cells have undergone two rounds of cell division in the presence of the pheromone.","definition_xrefs":["PomBase:mah","PMID:9034336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of cell cycle arrest in mitotic G1 phase in response to pheromone","termid":"FYPO:0004074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0000298"],"is_obsolete":false,"name":"two cell divisions prior to cell cycle arrest in mitotic G1 phase in response to pheromone","synonyms":[{"name":"two cell divisions prior to cell cycle arrest in mitotic G1 phase during cellular response to pheromone","type":"exact"},{"name":"two cell divisions prior to mitotic G1 arrest in response to pheromone","type":"exact"},{"name":"two cell divisions prior to mitotic cell cycle arrest in G1 phase in response to pheromone","type":"exact"},{"name":"two cell divisions prior to pheromone-induced G1 arrest","type":"exact"}],"termid":"FYPO:0004073"}


id: MONDO:0013124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pelvic organ prolapse","termid":"MONDO:0000082"},{"relation_name":"excluded_subClassOf","term_name":"peeling skin syndrome","termid":"MONDO:0019347"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pelvic organ prolapse, susceptibility to, 2","secondary_identifiers":["OMIM:613088","MEDGEN:416523","UMLS:C2751314"],"synonyms":[{"name":"Pvop2","type":"related"},{"name":"pelvic organ prolapse, susceptibility to, 2","type":"exact"},{"name":"pelvic organ prolapse, susceptibility to, type 2","type":"exact"}],"termid":"MONDO:0013124","xrefs":{"Monarch":{"xref_id":"0013124"}}}


id: PBO:0051452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 5-45","termid":"PBO:0051452"}


id: PBO:0051980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jade family PHD finger 3","termid":"PBO:0051980"}


id: PBO:0063034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAK1 interacting protein 1","termid":"PBO:0063034"}


id: GO:0048395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intermediate mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesodermal cell fate determination","termid":"GO:0048334"},{"relation_name":"regulates","term_name":"intermediate mesodermal cell fate determination","termid":"GO:0048394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intermediate mesodermal cell fate determination","termid":"GO:0048395"}


id: GO:0021647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the vestibulocochlear nerve to attain its fully functional state. This sensory nerve innervates the membranous labyrinth of the inner ear. The vestibular branch innervates the vestibular apparatus that senses head position changes relative to gravity. The auditory branch innervates the cochlear duct, which is connected to the three bony ossicles which transduce sound waves into fluid movement in the cochlea.","definition_xrefs":["GOC:dph","GOC:jid","ISBN:0838580343","GO_REF:0000021","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"vestibulocochlear nerve development","termid":"GO:0021562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibulocochlear nerve maturation","synonyms":[{"name":"CN VIII maturation","type":"related"},{"name":"auditory nerve maturation","type":"related"}],"termid":"GO:0021647"}


id: MONDO:0020461
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eyelid disorder","termid":"MONDO:0003382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"epiblepharon","secondary_identifiers":["MEDGEN:488856","GARD:19671","icd11.foundation:1757021264","Orphanet:99169","SCTID:253212001","UMLS:C0344503","ICD9:743.63"],"termid":"MONDO:0020461","xrefs":{"Monarch":{"xref_id":"0020461"}}}


id: GO:1905664
data:
  {"annotated_genes":["SJAG_04551","SJAG_00296","SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112854,90701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[101647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium ion import across plasma membrane.","definition_xrefs":["GO_REF:0000058","GOC:bhm","PMID:17640527","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion import","termid":"GO:0090279"},{"relation_name":"is_a","term_name":"regulation of calcium ion transmembrane transport","termid":"GO:1903169"},{"relation_name":"regulates","term_name":"calcium ion import across plasma membrane","termid":"GO:0098703"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of calcium ion import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905664","terms_by_termid":{"GO:1905665":null,"GO:1905949":null}}


id: GO:0016513
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric transcription factor complex that contains an alpha subunit (Runx1, Runx2 or Runx3 in human) that binds DNA and a non-DNA-binding beta subunit (CBFbeta), and binds to a consensus sequence 5'-YGYGGTY-3' found in several enhancers and promoters; the beta subunit enhances the DNA binding of the alpha subunit.","definition_xrefs":["PMID:15156179","PMID:8497254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"core-binding factor complex","synonyms":[{"name":"AML1 complex","type":"narrow"},{"name":"CBF complex","type":"exact"},{"name":"PEPB2 complex","type":"narrow"}],"termid":"GO:0016513"}


id: GO:0050815
data:
  {"annotated_genes":["SJAG_03118","SJAG_04933"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72003,77578],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"}]},"cv_name":"molecular_function","definition":"Binding to a phosphorylated serine residue within a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylated amino acid binding","termid":"GO:0045309"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03118":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"phosphoserine residue binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"phosphoserine binding","type":"related"}],"termid":"GO:0050815","terms_by_termid":{"GO:1990269":null}}


id: GO:0034330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cell junction. A cell junction is a specialized region of connection between two cells or between a cell and the extracellular matrix.","definition_xrefs":["GOC:jl","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell junction organization","synonyms":[{"name":"cell junction assembly and maintenance","type":"exact"},{"name":"cell junction biogenesis","type":"related"},{"name":"cell junction organisation","type":"exact"}],"termid":"GO:0034330"}


id: MONDO:0007241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bundle branch block, familial isolated complete right","secondary_identifiers":["MEDGEN:83311","MESH:C562759","OMIM:113950","SCTID:233919006","UMLS:C0340504"],"synonyms":[{"name":"bundle branch block, familial isolated complete right","type":"exact"}],"termid":"MONDO:0007241","xrefs":{"Monarch":{"xref_id":"0007241"}}}


id: MONDO:0007311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare subtype of CMT1 characterized by a variable clinical presentation. Onset within the first two years of life with a delay in walking is not uncommon; however, onset may occur later. CMT1E is caused by point mutations in the PMP22 (17p12) gene. The disease severity depends on the particular PMP22 mutation, with some cases being very mild and even resembling hereditary neuropathy with liability to pressure palsies, while others having an earlier onset with a more severe phenotype (reminiscent of Dejerine-Sottas syndrome) than that seen in CMT1A, caused by gene duplication. These severe cases may also report deafness and much slower motor nerve conduction velocities compared to CMT1A patients.","definition_xrefs":["Orphanet:90658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 1","termid":"MONDO:0019011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 1E","secondary_identifiers":["MEDGEN:501212","MESH:C537986","UMLS:C3495591","icd11.foundation:1924906594","DOID:0110153","GARD:9190","OMIM:118300"],"synonyms":[{"name":"CMT 1E","type":"related"},{"name":"CMT1E","type":"exact"},{"name":"Charcot Marie Tooth disease type 1E","type":"related"},{"name":"Charcot-Marie-Tooth disease and deafness","type":"exact"},{"name":"Charcot-Marie-Tooth disease demyelinating type 1E","type":"exact"},{"name":"Charcot-Marie-Tooth disease, demyelinating, type 1E","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 1E","type":"exact"},{"name":"Charcot-Marie-Tooth disease-deafness","type":"exact"},{"name":"Charcot-Marie-Tooth disease-deafness syndrome","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy and deafness, autosomal dominant","type":"related"},{"name":"autosomal dominant Charcot-Marie-Tooth neuropathy and deafness","type":"exact"}],"termid":"MONDO:0007311","xrefs":{"Monarch":{"xref_id":"0007311"}}}


id: PBO:0065520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat domain 2","termid":"PBO:0065520"}


id: PBO:0081245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 16","termid":"PBO:0081245"}


id: PR:O94450
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mcb1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94450"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0616 protein C1687.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.04","synonyms":[{"name":"Spom972h-mcb1","type":"exact"}],"termid":"PR:O94450"}


id: GO:0003175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the tricuspid valve over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrioventricular valve development","termid":"GO:0003171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tricuspid valve development","termid":"GO:0003175"}


id: PBO:0074104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 28 member 1","termid":"PBO:0074104"}


id: PBO:0027745
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleus_during_nitrogen_starvation","termid":"PBO:0027745"}


id: PBO:0072106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S13 pseudogene 4","termid":"PBO:0072106"}


id: GO:0030904
data:
  {"annotated_genes":["SJAG_04629","SJAG_00632","SJAG_01039","SJAG_00314","SJAG_04275","SJAG_00971"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88866,97692,101206,111944,117905,118512],"is_not":false,"summary":null,"term":"GO:0030904"},{"annotations":[117906],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030906"},{"annotations":[101207],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030905"}]},"cv_name":"cellular_component","definition":"A conserved hetero-pentameric membrane-associated complex involved in retrograde transport from endosomes to the Golgi apparatus. The budding yeast retromer comprises Vps35p, Vps29p, Vps26p, Vps5p, and Vps17p. The mammalian complex shows slight variation in composition compared to yeast, and comprises SNX1 or SNX2, SNX5 or SNX6, VPS26A or VPS26B, VPS29, and VPS35.","definition_xrefs":["GOC:bf","PMID:27385586","PMID:9700157","PMID:26220253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"endomembrane system","termid":"GO:0012505"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00314":null,"SJAG_00632":null,"SJAG_00971":null,"SJAG_01039":null,"SJAG_04275":null,"SJAG_04629":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"retromer complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030904","terms_by_termid":{"GO:0030904":null,"GO:0030905":null,"GO:0030906":null}}


id: FYPO:0002931
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which polyadenylated RNA molecules have poly(A) tails of that are longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal poly(A) tail length","termid":"FYPO:0002929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002929"}],"interesting_parent_ids":["FYPO:0002929","FYPO:0001985"],"is_obsolete":false,"name":"increased poly(A) tail length","synonyms":[{"name":"increased polyA sequence length","type":"exact"},{"name":"increased polyA tail length","type":"exact"},{"name":"long poly(a) tails","type":"exact"}],"termid":"FYPO:0002931"}


id: PBO:0079783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A4","termid":"PBO:0079783"}


id: MONDO:0022055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Klippel-Feil syndrome","termid":"MONDO:0001029"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calabro syndrome","secondary_identifiers":["MEDGEN:163240","MESH:C537960","GARD:8584","UMLS:C0796276"],"synonyms":[{"name":"craniosynostosis, limb abnormalities, brevicollis, micrognathia, pulmonary stenosis, and genital defects","type":"related"}],"termid":"MONDO:0022055","xrefs":{"Monarch":{"xref_id":"0022055"}}}


