# terms

id: PBO:0088505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (cytosine-3) methyltransferase Trm140","termid":"PBO:0088505"}


id: PBO:0074192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 2","termid":"PBO:0074192"}


id: MONDO:1012251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital lethal spasms, non-human animal","termid":"MONDO:1011630"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital lethal spasms, cattle","secondary_identifiers":["OMIA:000927-9913"],"termid":"MONDO:1012251","xrefs":{"Monarch":{"xref_id":"1012251"}}}


id: PBO:0076449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAFA chemokine like family member 5","termid":"PBO:0076449"}


id: GO:0140112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and secretion a set of components to form an extracellular vesicule, a membrane-bounded vesicle that is released into the extracellular region. Extracellular vesicles include exosomes, microvesicles and apoptotic bodies, based on the mechanism by which they are released from cells and differentiated based on their size and content.","definition_xrefs":["PMID:28736435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component biogenesis","termid":"GO:0044085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"extracellular vesicle biogenesis","synonyms":[{"name":"extracellular vesicle assembly","type":"exact"}],"termid":"GO:0140112"}


id: PBO:0012239
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staurosporine-related protein kinase","termid":"PBO:0012239"}


id: MONDO:0023263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glucose metabolism disease","termid":"MONDO:0002908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase deficiency","secondary_identifiers":["MEDGEN:224854","MESH:C536837","HGNC:4141","UMLS:C1291264"],"synonyms":[{"name":"GAPDH deficiency","type":"related"}],"termid":"MONDO:0023263","xrefs":{"Monarch":{"xref_id":"0023263"}}}


id: PBO:0077994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TraB domain containing 2B","termid":"PBO:0077994"}


id: PBO:0005635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein Mrp49 (predicted)","termid":"PBO:0005635"}


id: MONDO:0017661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare parkinsonian syndrome due to genetic neurodegenerative disease (obsolete MONDO:0017661)","secondary_identifiers":["Orphanet:307055"],"termid":"MONDO:0017661","xrefs":{"Monarch":{"xref_id":"0017661"}}}


id: PBO:0038700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 12","termid":"PBO:0038700"}


id: GO:0022889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of serine from one side of a membrane to the other. Serine is 2-amino-3-hydroxypropanoic acid.","definition_xrefs":["GOC:mtg_transport","RHEA:35031","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete serine transmembrane transporter activity (obsolete GO:0022889)","termid":"GO:0022889"}


id: PBO:0055395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2825","termid":"PBO:0055395"}


id: PBO:0039912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 10 like","termid":"PBO:0039912"}


id: MONDO:0002520
data:
  {"annotated_genes":["SJAG_01841","SJAG_02876","SJAG_03961","SJAG_01372","SJAG_02896","SJAG_04109","SJAG_04944"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008294"},{"annotations":[85205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008296"},{"annotations":[85357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007369"},{"annotations":[84950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013000"},{"annotations":[84641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008319"},{"annotations":[85224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008297"},{"annotations":[85870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957577"},{"annotations":[86208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010420"}]},"cv_name":"mondo","definition":"A group of metabolic diseases due to deficiency of one of a number of liver enzymes in the biosynthetic pathway of heme. They are characterized by the accumulation and increased excretion of porphyrins or its precursors. Clinical features include neurological symptoms (porphyria, acute intermittent), cutaneous lesions due to photosensitivity (porphyria cutanea tarda), or both (hereditary coproporphyria). Hepatic porphyrias can be hereditary or acquired as a result of toxicity to the hepatic tissues.","definition_xrefs":["MESH:D017094"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare hereditary metabolic disease with peripheral neuropathy (obsolete MONDO:0016133)","termid":"MONDO:0016133"},{"relation_name":"excluded_subClassOf","term_name":"inherited porphyria","termid":"MONDO:0019142"},{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic skin disease (obsolete MONDO:0024255)","termid":"MONDO:0024255"},{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"},{"relation_name":"is_a","term_name":"porphyria","termid":"MONDO:0037939"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01372":null,"SJAG_01841":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04944":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0005066"],"is_obsolete":false,"name":"hepatic porphyria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:659694","GARD:19255","MEDGEN:58119","SCTID:55056006","UMLS:C0162533","DOID:3133","GTR:AN0932921"],"synonyms":[{"name":"ALAD deficiency","type":"exact"},{"name":"Delta-aminolevulinate dehydratase deficiency","type":"exact"},{"name":"acute hepatic porphyria","type":"narrow"},{"name":"acute porphyria","type":"related"},{"name":"hepatic Porphyrias","type":"related"},{"name":"hepatic porphyria","type":"exact"},{"name":"liver porphyria","type":"exact"},{"name":"porphobilinogen synthase deficiency","type":"exact"},{"name":"porphyria of liver","type":"exact"},{"name":"porphyria, hepatic","type":"related"}],"termid":"MONDO:0002520","terms_by_termid":{"MONDO:0007369":null,"MONDO:0008294":null,"MONDO:0008296":null,"MONDO:0008297":null,"MONDO:0008319":null,"MONDO:0010420":null,"MONDO:0013000":null,"MONDO:0957577":null},"xrefs":{"Monarch":{"xref_id":"0002520"}}}


id: PBO:0058198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4491","termid":"PBO:0058198"}


id: PBO:0040514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA wax alcohol acyltransferase 1","termid":"PBO:0040514"}


id: GO:0003896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the synthesis of a short RNA primer on a DNA template, providing a free 3'-OH that can be extended by DNA-directed DNA polymerases. In certain conditions, for example in response to DNA damage, some primases synthesize a DNA primer.","definition_xrefs":["PMID:38203225","PMID:11395402","PMID:38492718","GOC:mah","GOC:mcc","PMID:26184436"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA primase activity (obsolete GO:0003896)","termid":"GO:0003896"}


id: PBO:0064073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 107","termid":"PBO:0064073"}


id: GO:0070993
data:
  {"annotated_genes":["SJAG_04981","SJAG_02263","SJAG_03147","SJAG_04744","SJAG_02995","SJAG_03732","SJAG_02390","SJAG_02376","SJAG_02164","SJAG_02628","SJAG_00662","SJAG_01117","SJAG_04891","SJAG_04900","SJAG_03629","SJAG_03472"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99596,97218,104808,98427,95570,110825,96338,110183,97276,94269,105095,106505,89414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016282"},{"annotations":[97219,105096,97880,110184,96339,89415,94270,110826,104809,96719,99597,95353,97277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033290"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains the small ribosomal subunit, a translation initiation ternary complex (i.e. an initiator tRNA, GTP, and an IF2 or eIF2 complex), and an mRNA.","definition_xrefs":["GOC:mah","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00662":null,"SJAG_01117":null,"SJAG_02164":null,"SJAG_02263":null,"SJAG_02376":null,"SJAG_02390":null,"SJAG_02628":null,"SJAG_02995":null,"SJAG_03147":null,"SJAG_03472":null,"SJAG_03629":null,"SJAG_03732":null,"SJAG_04744":null,"SJAG_04891":null,"SJAG_04900":null,"SJAG_04981":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"translation preinitiation complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070993","terms_by_termid":{"GO:0016282":null,"GO:0033290":null}}


id: MONDO:0008122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete olivopontocerebellar atrophy 5 (obsolete MONDO:0008122)","termid":"MONDO:0008122","xrefs":{"Monarch":{"xref_id":"0008122"}}}


id: PBO:0087486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of cohesin loading factor (Scc2p-Scc4p); complex is required for the loading of cohesin complexes onto chromosomes; involved in establishing sister chromatid cohesion during double-strand break repair via phosphorylated histone H2AX","termid":"PBO:0087486"}


id: PBO:0083746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the TIM23 complex; acts as receptor for the translocase of the inner mitochondrial membrane (TIM23) complex guiding incoming precursors from the TOM complex; may control the gating of the Tim23p-Tim17p channel","termid":"PBO:0083746"}


id: PBO:0052176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 6","termid":"PBO:0052176"}


id: MONDO:0018999
data:
  {"annotated_genes":["SJAG_03162"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007620"},{"annotations":[84911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009515"}]},"cv_name":"mondo","definition":"LCAT (lecithin-cholesterol acyltransferase) deficiency is a rare lipoprotein metabolism disorder characterized clinically by corneal opacities, and sometimes renal failure and hemolytic anemia, and biochemically by severely reduced HDL cholesterol.","definition_xrefs":["Orphanet:650"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"hypoalphalipoproteinemia","termid":"MONDO:0017773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"LCAT deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1830326","GARD:16539","NANDO:1200852","SCTID:49227001","UMLS:C5779633"],"synonyms":[{"name":"lecithin-cholesterol acyltransferase deficiency","type":"exact"}],"termid":"MONDO:0018999","terms_by_termid":{"MONDO:0007620":null,"MONDO:0009515":null},"xrefs":{"Monarch":{"xref_id":"0018999"}}}


id: MONDO:0003541
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute lymphoblastic leukemia occurring during adulthood.","definition_xrefs":["NCIT:C4967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute lymphoblastic leukemia","termid":"MONDO:0004967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"adult acute lymphoblastic leukemia","secondary_identifiers":["MEDGEN:199693","UMLS:C0751606","DOID:5604"],"synonyms":[{"name":"acute lymphoblastic leukaemia (ALL)","type":"broad"},{"name":"acute lymphoblastic leukemia (ALL)","type":"broad"},{"name":"adult ALL","type":"exact"},{"name":"adult acute lymphoblastic leukemia","type":"exact"},{"name":"adult acute lymphocytic leukaemia","type":"exact"},{"name":"adult acute lymphocytic leukemia","type":"exact"},{"name":"adult acute lymphogenous leukaemia","type":"exact"},{"name":"adult acute lymphogenous leukemia","type":"exact"},{"name":"adult acute lymphoid leukaemia","type":"exact"},{"name":"adult acute lymphoid leukemia","type":"exact"},{"name":"adult precursor lymphoblastic leukaemia","type":"exact"},{"name":"adult precursor lymphoblastic leukemia","type":"exact"}],"termid":"MONDO:0003541","xrefs":{"Monarch":{"xref_id":"0003541"}}}


id: PBO:0057506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 624","termid":"PBO:0057506"}


id: FYPO:0000340
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a single functional copy of a gene does not provide sufficient normal function in a diploid cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"haploinsufficient","synonyms":[{"name":"haploinsufficient during mitotic cell cycle","type":"related"},{"name":"haploinsufficient during vegetative growth","type":"exact"}],"termid":"FYPO:0000340"}


id: MONDO:0004551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of a congenital diverticulum of the lower intestine.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine diverticulitis","termid":"MONDO:0001229"},{"relation_name":"is_a","term_name":"enteritis","termid":"MONDO:0043579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Meckel diverticulitis","secondary_identifiers":["DOID:8408","NCIT:C27300","SCTID:48241004","icd11.foundation:543494453","UMLS:C0267497","MEDGEN:75634"],"synonyms":[{"name":"Meckel diverticulitis","type":"exact"},{"name":"Meckel's diverticulitis","type":"related"},{"name":"Meckel's diverticulum inflammation","type":"exact"},{"name":"inflammation of Meckel's diverticulum","type":"exact"}],"termid":"MONDO:0004551","xrefs":{"Monarch":{"xref_id":"0004551"}}}


id: PBO:0061201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOC2 like nucleolar associated transcriptional repressor pseudogene 1","termid":"PBO:0061201"}


id: PBO:0043728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 7","termid":"PBO:0043728"}


id: PBO:0116392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular alpha-glucosidase Gto2","termid":"PBO:0116392"}


id: PATO:0002007
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A complete three dimensional shape in which for every line connecting pair of points on the object is within the object. Or: a shape lacking cavities. Contrast: concave.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"has_cross_section","term_name":"2-D shape","termid":"PATO:0002006"},{"relation_name":"is_a","term_name":"3-D shape","termid":"PATO:0002266"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"convex 3-D shape","secondary_identifiers":["Image:http\\://upload.wikimedia.org/wikipedia/commons/0/06/Convex_polygon_illustration1.png"],"termid":"PATO:0002007"}


id: FYPO:0005404
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which chromosomes remain linear, but lose telomeric repeats. Subtelomeric DNA may also be lost.","definition_xrefs":["PMID:12930956","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome morphology during vegetative growth","termid":"FYPO:0000848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000652","FYPO:0005447","FYPO:0000707","FYPO:0000641","FYPO:0000654","FYPO:0000002","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"telomeric regions absent from linear chromosomes","synonyms":[{"name":"telomeric regions absent from linear chromosomes during mitotic cell cycle","type":"related"},{"name":"telomeric regions absent from linear chromosomes during vegetative growth","type":"exact"}],"termid":"FYPO:0005404"}


id: MONDO:1011042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary lightly pigmented coat, lips and nose and blue eyes in dogs due to a variation in the OCA2 gene.","definition_xrefs":["PMID:28973042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, OCA2-related, dog","secondary_identifiers":["OMIA:002130-9615"],"termid":"MONDO:1011042","xrefs":{"Monarch":{"xref_id":"1011042"}}}


id: PBO:0038510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily D member 1 pseudogene 5","termid":"PBO:0038510"}


id: PBO:0054561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1963","termid":"PBO:0054561"}


id: PBO:0110168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zpr1 co-chaperone for EF-1 alpha folding","termid":"PBO:0110168"}


id: GO:0021913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that results in the commitment of a cell to become an interneuron in the ventral spinal cord.","definition_xrefs":["PMID:11262869","GO_REF:0000021","GOC:cls","GOC:jid","GOC:dgh","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in ventral spinal cord interneuron specification (obsolete GO:0021913)","termid":"GO:0021913"}


id: PBO:0075754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sushi repeat containing protein X-linked","termid":"PBO:0075754"}


id: PBO:0028896
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_telomere_maintenance","termid":"PBO:0028896"}


id: PBO:0058949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"marker of proliferation Ki-67 pseudogene 1","termid":"PBO:0058949"}


id: PBO:0086627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and to the nucleus","termid":"PBO:0086627"}


id: PBO:0079591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 D3 pseudogene 3","termid":"PBO:0079591"}


id: GO:0034739
data:
  {"annotated_genes":["SJAG_03627","SJAG_00581"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96711,108963],"is_not":false,"summary":null,"term":"GO:0034739"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H4 N6-acetyl-L-lysine (position 16) + H2O = histone H4 L-lysine (position 16) + acetate. This reaction represents the removal of an acetyl group from lysine at position 16 of the histone H4 protein.","definition_xrefs":["GOC:vw","PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4K deacetylase activity","termid":"GO:0141051"},{"relation_name":"is_a","term_name":"histone deacetylase activity, hydrolytic mechanism","termid":"GO:0141221"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00581":null,"SJAG_03627":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0033558","GO:0016787","GO:0019213","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"histone H4K16 deacetylase activity, hydrolytic mechanism","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H4-K16 deacetylase activity","type":"exact"},{"name":"histone H4K12 deacetylase activity","type":"broad"},{"name":"histone deacetylase activity (H4-K16 specific)","type":"exact"}],"termid":"GO:0034739","terms_by_termid":{"GO:0034739":null}}


id: GO:0004660
data:
  {"annotated_genes":["SJAG_04923","SJAG_02583"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90033,90034,100898,100899],"is_not":false,"summary":null,"term":"GO:0004660"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteinyl-[protein] + (2E,6E)-farnesyl diphosphate = S-(2E,6E)-farnesyl-L-cysteinyl-[protein] + diphosphate.","definition_xrefs":["RHEA:13345","PMID:8621375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein prenyltransferase activity","termid":"GO:0008318"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02583":null,"SJAG_04923":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016765","GO:0003674","GO:0003824","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"protein farnesyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.5.1.58","Reactome:R-HSA-9647978","Reactome:R-HSA-2530501","GO:0018223","MetaCyc:RXN-17573"],"synonyms":[{"name":"CAAX farnesyltransferase activity","type":"narrow"},{"name":"FTase activity","type":"related"},{"name":"farnesyl-diphosphate:protein-cysteine farnesyltransferase activity","type":"related"},{"name":"protein-cysteine farnesyltransferase activity","type":"exact"}],"termid":"GO:0004660","terms_by_termid":{"GO:0004660":null}}


id: PBO:0000941
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.3.1","termid":"PBO:0000941"}


id: GO:0052134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a lower concentration of environmental oxygen on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative aerotaxis on or near host (obsolete GO:0052134)","termid":"GO:0052134"}


id: GO:0001016
data:
  {"annotated_genes":["SJAG_03354","SJAG_00421","SJAG_03120","SJAG_05339"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99082,87663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000992"},{"annotations":[99084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001002"},{"annotations":[99085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001003"},{"annotations":[95070,102572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001006"}]},"cv_name":"molecular_function","definition":"Binding to a DNA region that controls the transcription of a gene by RNA polymerase III. Binding may occur as a sequence specific interaction or as an interaction observed only once a factor has been recruited to the DNA by other factors.","definition_xrefs":["PMID:12381659","GOC:txnOH","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription cis-regulatory region binding","termid":"GO:0000976"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00421":null,"SJAG_03120":null,"SJAG_03354":null,"SJAG_05339":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0000976","GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"RNA polymerase III transcription regulatory region sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA polymerase III regulatory region DNA binding","type":"related"}],"termid":"GO:0001016","terms_by_termid":{"GO:0000992":null,"GO:0001002":null,"GO:0001003":null,"GO:0001006":null}}


id: GO:1901565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of organonitrogen compound.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete organonitrogen compound catabolic process (obsolete GO:1901565)","termid":"GO:1901565"}


id: PATO:0000841
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000841 relative auditory acuity value (obsolete PATO:0000841)","termid":"PATO:0000841"}


id: GO:2001012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mesenchymal cells of the renal system as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:obol","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell differentiation","termid":"GO:0048762"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell differentiation involved in renal system development","synonyms":[{"name":"mesenchymal cell differentiation involved in urinary system development","type":"related"},{"name":"mesenchymal cell differentiation involved in urinary tract development","type":"related"}],"termid":"GO:2001012"}


id: PBO:0071198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 39","termid":"PBO:0071198"}


id: FYPO:0002015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to iron ion starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to iron ion starvation","synonyms":[{"name":"decreased growth during cellular response to iron ion starvation","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to iron ion starvation","type":"exact"},{"name":"hypersensitive to iron ion starvation","type":"exact"},{"name":"sensitive to iron ion depletion","type":"exact"},{"name":"sensitive to iron ion deprivation","type":"exact"},{"name":"sensitive to iron ion starvation during mitotic cell cycle","type":"related"},{"name":"sensitive to iron ion starvation during vegetative growth","type":"exact"},{"name":"sensitive to iron starvation","type":"exact"}],"termid":"FYPO:0002015"}


id: PR:Q10304
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22H10.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22H10.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.11c","synonyms":[{"name":"Spom972h-SPAC22H10.11c","type":"exact"}],"termid":"PR:Q10304"}


id: MONDO:0005941
data:
  {"annotated_genes":["SJAG_00260","SJAG_01895","SJAG_01671"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011121"},{"annotations":[85121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007273"},{"annotations":[85330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013602"}]},"cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the retroperitoneum. The vast majority of cases are carcinomas, lymphomas, or sarcomas.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"retroperitoneal neoplasm","termid":"MONDO:0024645"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null,"SJAG_01895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"retroperitoneal cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D012186","EFO:0007466","NCIT:C3537","UMLS:C0153465","DOID:5875","ICD9:158","ICD9:158.0","SCTID:126872008","MEDGEN:57559","NCIT:C3357"],"synonyms":[{"name":"cancer of retroperitoneal space","type":"exact"},{"name":"malignant neoplasm of retroperitoneal space","type":"exact"},{"name":"malignant neoplasm of retroperitoneum","type":"related"},{"name":"malignant neoplasm of retroperitoneum and peritoneum","type":"exact"},{"name":"malignant retroperitoneal cancer","type":"related"},{"name":"malignant retroperitoneal neoplasm","type":"exact"},{"name":"malignant retroperitoneal space neoplasm","type":"exact"},{"name":"malignant tumor of peritoneum and retroperitoneum","type":"exact"},{"name":"malignant tumour of peritoneum and retroperitoneum","type":"exact"},{"name":"neoplasm of retroperitoneum","type":"broad"},{"name":"neoplasm of the retroperitoneum","type":"broad"},{"name":"retroperitoneal neoplasm","type":"broad"},{"name":"retroperitoneal space cancer","type":"exact"},{"name":"tumor of retroperitoneum","type":"broad"},{"name":"tumour of retroperitoneum","type":"broad"}],"termid":"MONDO:0005941","terms_by_termid":{"MONDO:0007273":null,"MONDO:0011121":null,"MONDO:0013602":null},"xrefs":{"Monarch":{"xref_id":"0005941"}}}


id: SO:0000235
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA site where a transcription factor binds.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"},{"relation_name":"is_a","term_name":"nucleotide_to_protein_binding_site","termid":"SO:0001654"},{"relation_name":"part_of","term_name":"cis_regulatory_module","termid":"SO:0000727"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TF_binding_site","synonyms":[{"name":"TF binding site","type":"exact"},{"name":"transcription factor binding site","type":"exact"}],"termid":"SO:0000235"}


id: GO:0018360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The linkage of protein to heme P460 via heme P460-bis-L-cysteine-L-lysine.","definition_xrefs":["RESID:AA0271"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-heme P460 linkage via heme P460-bis-L-cysteine-L-lysine (obsolete GO:0018360)","synonyms":[{"name":"protein-haem P460 linkage via haem P460-bis-L-cysteine-L-lysine","type":"exact"}],"termid":"GO:0018360"}


id: PBO:0027843
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_localization_to_double-strand_break_site","termid":"PBO:0027843"}


id: MONDO:0014508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any vitelliform macular dystrophy in which the cause of the disease is a mutation in the IMPG1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult-onset foveomacular vitelliform dystrophy","termid":"MONDO:0011979"},{"relation_name":"is_a","term_name":"IMPG1-related recessive retinopathy","termid":"MONDO:1040037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005328"],"is_obsolete":false,"name":"vitelliform macular dystrophy 4","secondary_identifiers":["MEDGEN:863779","GARD:16064","OMIM:616151","UMLS:C4015342"],"synonyms":[{"name":"IMPG1 vitelliform macular dystrophy","type":"exact"},{"name":"VMD4","type":"related"},{"name":"macular dystrophy, vitelliform, 4","type":"exact"},{"name":"macular dystrophy, vitelliform, type 4","type":"exact"},{"name":"vitelliform macular dystrophy caused by mutation in IMPG1","type":"exact"}],"termid":"MONDO:0014508","xrefs":{"Monarch":{"xref_id":"0014508"}}}


id: PBO:0053925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1222","termid":"PBO:0053925"}


id: GO:0033324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of choline (2-hydroxyethyltrimethylammonium), via the intermediate N-monomethylethanolamine.","definition_xrefs":["MetaCyc:PWY-3542","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choline biosynthetic process","termid":"GO:0042425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"choline biosynthetic process via N-monomethylethanolamine","synonyms":[{"name":"choline anabolism via N-monomethylethanolamine","type":"exact"},{"name":"choline biosynthesis via N-monomethylethanolamine","type":"exact"},{"name":"choline formation via N-monomethylethanolamine","type":"exact"},{"name":"choline synthesis via N-monomethylethanolamine","type":"exact"}],"termid":"GO:0033324"}


id: PBO:0080448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and immunoglobulin domain containing 10","termid":"PBO:0080448"}


id: GO:0004754
data:
  {"annotated_genes":["SJAG_02388"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92474],"is_not":false,"summary":null,"term":"GO:0004754"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-saccharopine + H2O + NAD+ = 2-oxoglutarate + L-lysine + H+ + NADH.","definition_xrefs":["EC:1.5.1.7","RHEA:12440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"saccharopine dehydrogenase activity","termid":"GO:0004753"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02388":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"saccharopine dehydrogenase (NAD+, L-lysine-forming) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00715","MetaCyc:1.5.1.7-RXN"],"synonyms":[{"name":"6-N-(L-1,3-dicarboxypropyl)-L-lysine:NAD+ oxidoreductase (L-lysine-forming)","type":"related"},{"name":"N6-(L-1,3-dicarboxypropyl)-L-lysine:NAD+ oxidoreductase (L-lysine-forming)","type":"related"},{"name":"N6-(glutar-2-yl)-L-lysine:NAD oxidoreductase (L-lysine-forming)","type":"related"},{"name":"dehydrogenase, saccharopine (nicotinamide adenine dinucleotide, lysine forming)","type":"related"},{"name":"epsilon-N-(L-glutaryl-2)-L-lysine:NAD oxidoreductase (L-lysine forming)","type":"related"}],"termid":"GO:0004754","terms_by_termid":{"GO:0004754":null}}


id: PBO:0040447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 10A (putative)","termid":"PBO:0040447"}


id: PBO:0004248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Rsv1","termid":"PBO:0004248"}


id: PBO:0045075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLGAP2 antisense RNA 1","termid":"PBO:0045075"}


id: MONDO:0014591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant Robinow syndrome in which the cause of the disease is a mutation in the DVL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant Robinow syndrome","termid":"MONDO:0008389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant Robinow syndrome 2","secondary_identifiers":["DOID:0060765","MEDGEN:897039","OMIM:616331","UMLS:C4225363","GARD:18548"],"synonyms":[{"name":"DRS2","type":"exact"},{"name":"DVL1 autosomal dominant Robinow syndrome","type":"exact"},{"name":"Robinow syndrome, autosomal dominant 2","type":"related"},{"name":"Robinow syndrome, autosomal dominant type 2","type":"exact"},{"name":"autosomal dominant Robinow syndrome caused by mutation in DVL1","type":"exact"},{"name":"autosomal dominant Robinow syndrome type 2","type":"exact"}],"termid":"MONDO:0014591","xrefs":{"Monarch":{"xref_id":"0014591"}}}


id: GO:0102591
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: delphinidin 3-O-rutinoside-7-O-glucoside + 1-O-4-hydroxybenzoyl-beta-D-glucose = delphinidin 3-O-rutinoside-7-O-(6-O-(p-hydroxybenzoyl)-glucoside) + beta-D-glucose.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete delphinidin 7-O-glucoside acyltransferase (acyl-glucose dependent) activity (obsolete GO:0102591)","termid":"GO:0102591"}


id: MONDO:0800147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any genetic hemophagocytic lymphohistiocytosis in which the cause of the disease is an autosomal recessive variation in the RHOG gene.","definition_xrefs":["PMID:33513601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hemophagocytic lymphohistiocytosis","termid":"MONDO:0015541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"hemophagocytic lymphohistiocytosis due to RhoG deficiency","termid":"MONDO:0800147","xrefs":{"Monarch":{"xref_id":"0800147"}}}


id: SOFP:Gap
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"A GFF3 Gap cigar string","definition_xrefs":["so:sjc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gap","termid":"SOFP:Gap"}


id: PBO:0005904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Glutamic acid, mitochondrial","termid":"PBO:0005904"}


id: PR:Q09923
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized oxidoreductase YdjG that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01759","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase yakc [NADP(+)] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.12","secondary_identifiers":["UniProtKB:Q09923"],"synonyms":[{"name":"Spom972h-ydjG","type":"exact"}],"termid":"PR:Q09923"}


id: MONDO:0016525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial hyperaldosteronism (FH) is the heritable form of primary aldosteronism (PA) which comprises three identified subtypes to date: FH type I (FH-I) characterized by early-onset hypertension, glucocorticoid remediable adrenocorticotropic hormone (ACTH)-dependent hyperaldosteronism, variable hypokalemia, and overproduction of 18-oxocortisol and 18-hydroxycortisol; FH type II (FH-II) characterized by hypertension of varying severity and hyperaldosteronism not suppressible by dexamethasone; and FH type III (FH-III) characterized by profound hypokalemia, early-onset severe hypertension, non glucocorticoid-remediable hyperaldosteronism, and overproduction of 18-oxocortisol and 18-hydroxycortisol.","definition_xrefs":["Orphanet:235936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary aldosteronism","termid":"MONDO:0001422"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial hyperaldosteronism","secondary_identifiers":["icd11.foundation:1586992015","MEDGEN:780028","MESH:C580087","OMIMPS:103900","GARD:20630","NANDO:2200602","Orphanet:371861","NCIT:C127160","ICD10CM:E26.0","SCTID:703231005","UMLS:C3713420"],"synonyms":[{"name":"FH","type":"exact"},{"name":"genetic hyperaldosteronism","type":"exact"},{"name":"hereditary hyperaldosteronism","type":"exact"}],"termid":"MONDO:0016525","xrefs":{"Monarch":{"xref_id":"0016525"}}}


id: MONDO:0015167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of sporadic congenital anomalies, that occur in association with amniotic bands, involving the limbs, craniofacial regions, spine and trunk with a highly variable clinical spectrum ranging from simple digital band constriction (or amputation) to complex craniofacial, central nervous system and visceral anomalies.","definition_xrefs":["Orphanet:1034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"amniotic band syndrome","secondary_identifiers":["MESH:D000652","MEDGEN:66322","UMLS:C0220724","NCIT:C84552","GARD:429","icd11.foundation:1033549095","OMIM:217100","Orphanet:295000","NORD:766","SCTID:440214006"],"synonyms":[{"name":"Adam Complex","type":"related"},{"name":"Adam syndrome","type":"exact"},{"name":"CONSTRICTING bands, congenital","type":"related"},{"name":"Streeter anomaly","type":"related"},{"name":"Streeter dysplasia","type":"exact"},{"name":"amniotic band constriction","type":"exact"},{"name":"amniotic band sequence","type":"related"},{"name":"amniotic bands","type":"exact"},{"name":"amniotic bands sequence","type":"related"},{"name":"amniotic deformity-adhesion-mutilation syndrome","type":"exact"},{"name":"amputation, congenital","type":"related"},{"name":"congenital constricting bands","type":"related"},{"name":"congenital ring constrictions","type":"exact"},{"name":"constriction band syndrome","type":"exact"},{"name":"constriction rings syndrome","type":"exact"},{"name":"deformity due to amniotic band","type":"exact"},{"name":"familial amniotic bands","type":"related"},{"name":"terminal transverse defects of arm","type":"related"}],"termid":"MONDO:0015167","xrefs":{"Monarch":{"xref_id":"0015167"}}}


id: PBO:0002165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Rrp14-N (predicted)","termid":"PBO:0002165"}


id: PBO:0083964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Geranylgeranyl diphosphate synthase (GGPPS); increases the intracellular pool of geranylgeranyl diphosphate, suppressor of bet2 mutation that causes defective geranylgeranylation of small GTP-binding proteins that mediate vesicular traffic","termid":"PBO:0083964"}


id: GO:0140051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endocardial cushion to mesenchymal transition.","definition_xrefs":["GOC:rph","GOC:BHF","PMID:21778427","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062043"},{"relation_name":"is_a","term_name":"regulation of endocardial cushion to mesenchymal transition","termid":"GO:0140049"},{"relation_name":"positively_regulates","term_name":"endocardial cushion to mesenchymal transition","termid":"GO:0090500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endocardial cushion to mesenchymal transition","termid":"GO:0140051"}


id: SO:0001764
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A physical quality which inheres to the variant by virtue of the number instances of the variant within a population.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variant_frequency","termid":"SO:0001763"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unique_variant","synonyms":[{"name":"unique variant","type":"exact"}],"termid":"SO:0001764"}


id: PBO:0002536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tethering factor for nuclear proteasome Cut8","termid":"PBO:0002536"}


id: PBO:0079216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiosulfate sulfurtransferase like domain containing 1","termid":"PBO:0079216"}


id: PBO:0000561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin family","termid":"PBO:0000561"}


id: PBO:0038641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA thioesterase 8","termid":"PBO:0038641"}


id: PBO:0051173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-62 (pseudogene)","termid":"PBO:0051173"}


id: GO:0019242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of methylglyoxal, CH3-CO-CHO, the aldehyde of pyruvic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylglyoxal metabolic process","termid":"GO:0009438"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"methylglyoxal biosynthetic process","synonyms":[{"name":"methylglyoxal anabolism","type":"exact"},{"name":"methylglyoxal biosynthesis","type":"exact"},{"name":"methylglyoxal formation","type":"exact"},{"name":"methylglyoxal synthesis","type":"exact"}],"termid":"GO:0019242"}


id: PBO:0042577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase inhibitor 2C","termid":"PBO:0042577"}


id: GO:0015474
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Transports a passenger protein from the periplasm to the external milieu; the passenger protein and the porin are the N- and C-terminal regions of the same protein, respectively.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","TC:1.B.12.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porin activity","termid":"GO:0015288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"autotransporter activity","termid":"GO:0015474"}


id: PATO:0000044
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality which inheres in a bearer by virtue of the number of the bearer's repetitive actions in a particular time.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/frequency"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rate","termid":"PATO:0000161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frequency","termid":"PATO:0000044"}


id: RO:0001001
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between two distinct material entities, the old entity and the new entity, in which the new entity begins to exist when the old entity ceases to exist, and the new entity inherits the significant portion of the matter of the old entity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"derives_into","termid":"RO:0001001"}


id: PBO:0116418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR7 ortholog, implicated vacuolar acidification, autophagy, or vacuole localization","termid":"PBO:0116418"}


id: GO:0043045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A epigenetic process that happens during embryonic development that modulates gene expression potential at later stages of development of the organism, including the adult. Epigenetic regulation takes place via chromatin remodeling either by modifying higher order chromatin fiber structure, nucleosomal histones, or cytosine DNA methylation.","definition_xrefs":["PMID:12138111","PMID:22868271","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epigenetic regulation of gene expression","termid":"GO:0040029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006325"],"is_obsolete":false,"name":"epigenetic programming of gene expression","synonyms":[{"name":"DNA methylation involved in embryo development","type":"related"},{"name":"de novo DNA methylation","type":"related"},{"name":"epigenetic regulation of embryonic gene expression","type":"related"},{"name":"post-fertilization epigenetic regulation of gene expression","type":"related"}],"termid":"GO:0043045"}


id: GO:0140317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a substance across the outer membrane in cells with two membranes.","definition_xrefs":["PMID:15968039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"export across cell outer membrane","termid":"GO:0140317"}


id: PBO:0085358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphopantetheinyl transferase involved in lysine biosynthesis; converts inactive apo-form of Lys2p (alpha-aminoadipate reductase) into catalytically active holo-form by posttranslational addition of phosphopantetheine","termid":"PBO:0085358"}


id: MOD:01432
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to a (2S,4S)-4,5-dihydroxyleucine.","definition_xrefs":["ChEBI:141819","RESID:AA0446","PubMed:3718926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated leucine","termid":"MOD:01412"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,4S)-4,5-dihydroxyleucine","synonyms":[{"name":"(2S,4S)-2-amino-4,5-dihydroxy-4-methylpentanoic acid","type":"exact"},{"name":"(2S,4S)-4,5-dihydroxyleucine","type":"exact"},{"name":"(4S)-4,5-dihydroxyleucine","type":"exact"},{"name":"MOD_RES (4S)-4,5-dihydroxyleucine","type":"exact"},{"name":"gamma,delta-dihydroxyleucine","type":"exact"}],"termid":"MOD:01432"}


id: MONDO:0013585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hydrolethalus syndrome in which the cause of the disease is a mutation in the KIF7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolethalus syndrome","termid":"MONDO:0006037"},{"relation_name":"is_a","term_name":"KIF7-related ciliopathy","termid":"MONDO:0800463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"hydrolethalus syndrome 2","secondary_identifiers":["MEDGEN:481529","DOID:0111356","GARD:15759","OMIM:614120","UMLS:C3279899"],"synonyms":[{"name":"HLS2","type":"related"},{"name":"KIF7 hydrolethalus syndrome","type":"exact"},{"name":"hydrolethalus syndrome 2","type":"exact"},{"name":"hydrolethalus syndrome caused by mutation in KIF7","type":"exact"},{"name":"hydrolethalus syndrome type 2","type":"exact"}],"termid":"MONDO:0013585","xrefs":{"Monarch":{"xref_id":"0013585"}}}


id: PBO:0038847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 16","termid":"PBO:0038847"}


id: GO:0060438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a trachea over time, from its formation to the mature structure. The trachea is the portion of the airway that attaches to the bronchi as it branches.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"respiratory system development","termid":"GO:0060541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trachea development","termid":"GO:0060438"}


id: PBO:0057856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3167","termid":"PBO:0057856"}


id: PBO:0080498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor pseudogene 1","termid":"PBO:0080498"}


id: PBO:0029652
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_histidine","termid":"PBO:0029652"}


id: PBO:0034124
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spatially_coextensive_with","termid":"PBO:0034124"}


id: PBO:0078599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 12, Y-linked","termid":"PBO:0078599"}


id: FYPO:0006971
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of biotin measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular biotin level","synonyms":[{"name":"decreased cellular biotin level during mitotic cell cycle","type":"related"},{"name":"decreased cellular biotin level during vegetative growth","type":"exact"},{"name":"reduced cellular biotin level","type":"exact"}],"termid":"FYPO:0006971"}


id: PBO:0082683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the ESCRT-II complex; ESCRT-II is involved in ubiquitin-dependent sorting of proteins into the endosome; appears to be functionally related to SNF7; involved in glucose derepression","termid":"PBO:0082683"}


id: MONDO:0017649
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemidystonia-hemiatrophy (HD-HA) is a rare dystonia, usually caused by a static cerebral injury occurring at birth or during infancy, that is characterized by a combination of hemidystonia (HD), involving one half of the body, and hemiatrophy (HA) on the same side as the HD.","definition_xrefs":["Orphanet:306741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dystonic disorder","termid":"MONDO:0003441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"hemidystonia-hemiatrophy syndrome","secondary_identifiers":["UMLS:C4510649","GARD:21273","MEDGEN:1386711"],"synonyms":[{"name":"HD-HA syndrome","type":"exact"}],"termid":"MONDO:0017649","xrefs":{"Monarch":{"xref_id":"0017649"}}}


id: _global:capable_of_part_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c stands in this relationship to p if and only if there exists some p' such that c is capable_of p', and p' is part_of p.","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_agent_in_process","termid":"_global:causal_agent_in_process"},{"relation_name":"is_a","term_name":"functionally_related_to","termid":"_global:functionally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capable_of_part_of","secondary_identifiers":["RO:0002216"],"termid":"_global:capable_of_part_of"}


id: MONDO:0018087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral infectious disease caused by RNA viruses in the Arenaviridae, Bunyaviridae, Filoviridae, or Flaviviridae family, and characterized by a severe multisystem syndrome, with damage to the vascular system and hemorrhaging.","direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"hemorrhagic fever","termid":"MONDO:0600002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"viral hemorrhagic fever","secondary_identifiers":["Orphanet:341","SCTID:240523007","UMLS:C0019104","MEDGEN:9213","MESH:D006482","NCIT:C36170","GARD:5494"],"synonyms":[{"name":"VHF","type":"exact"},{"name":"VHFs","type":"exact"},{"name":"haemorrhagic fever","type":"broad"},{"name":"haemorrhagic fevers, viral","type":"exact"},{"name":"hemorrhagic fever","type":"broad"},{"name":"hemorrhagic fevers","type":"broad"},{"name":"viral haemorrhagic fever","type":"exact"}],"termid":"MONDO:0018087","xrefs":{"Monarch":{"xref_id":"0018087"}}}


id: PBO:0085168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycosylated plasma membrane protein; acts as a sensor for cell wall integrity signaling and activates the pathway; interacts with Rom2p, a guanine nucleotide exchange factor for Rho1p, and with cell integrity pathway protein Zeo1p; MID2 has a paralog, MTL1, that arose from the whole genome duplication","termid":"PBO:0085168"}


id: PBO:0054733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2142","termid":"PBO:0054733"}


id: FYPO:0003049
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a transcript, i.e. an RNA molecule synthesized on a DNA template by RNA polymerase, is longer than normal due to transcription beyond the normal termination site.","definition_xrefs":["PMID:22582262","PomBase:mah","SO:0000673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcript length","termid":"FYPO:0003048"},{"relation_name":"output_of","term_name":"abnormal transcription termination","termid":"FYPO:0003556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0003048"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0000294"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0003048","FYPO:0001320","FYPO:0006551","FYPO:0000294","FYPO:0001985"],"is_obsolete":false,"name":"increased transcriptional readthrough","synonyms":[{"name":"3'-extended transcript","type":"related"},{"name":"increased transcript length by 3' extension","type":"related"},{"name":"increased transcript length due to transcriptional readthrough","type":"exact"},{"name":"poly(A) readthrough","type":"related"}],"termid":"FYPO:0003049"}


id: PBO:0067133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 181, pseudogene","termid":"PBO:0067133"}


id: MONDO:0021515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the ethmoid sinus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system benign neoplasm","termid":"MONDO:0000382"},{"relation_name":"is_a","term_name":"bone benign neoplasm","termid":"MONDO:0000631"},{"relation_name":"is_a","term_name":"sensory organ benign neoplasm","termid":"MONDO:0000633"},{"relation_name":"is_a","term_name":"ethmoidal sinus neoplasm","termid":"MONDO:0001764"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of ethmoidal sinus","secondary_identifiers":["MEDGEN:91050","SCTID:92093000","ICD9:212.0","UMLS:C0345670","NCIT:C4417"],"synonyms":[{"name":"benign ethmoid sinus neoplasm","type":"exact"},{"name":"benign ethmoid sinus tumor","type":"exact"},{"name":"benign ethmoid sinus tumour","type":"exact"},{"name":"benign ethmoidal sinus neoplasm","type":"exact"},{"name":"benign ethmoidal sinus tumor","type":"exact"},{"name":"benign ethmoidal sinus tumour","type":"exact"},{"name":"benign neoplasm of ethmoid sinus","type":"exact"},{"name":"benign neoplasm of the ethmoid sinus","type":"exact"},{"name":"benign neoplasm of the ethmoidal sinus","type":"exact"},{"name":"benign tumor of ethmoid sinus","type":"exact"},{"name":"benign tumor of ethmoidal sinus","type":"exact"},{"name":"benign tumor of the ethmoid sinus","type":"exact"},{"name":"benign tumor of the ethmoidal sinus","type":"exact"},{"name":"benign tumour of ethmoid sinus","type":"exact"},{"name":"benign tumour of ethmoidal sinus","type":"exact"},{"name":"benign tumour of the ethmoid sinus","type":"exact"},{"name":"benign tumour of the ethmoidal sinus","type":"exact"},{"name":"ethmoid sinus benign neoplasm","type":"exact"}],"termid":"MONDO:0021515","xrefs":{"Monarch":{"xref_id":"0021515"}}}


id: PBO:0085141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein that binds the rDNA replication fork barrier site; required for replication fork blocking, recombinational hotspot activity, condensin recruitment to replication fork barrier (RFB), and rDNA repeat segregation; related to retroviral integrases","termid":"PBO:0085141"}


id: PBO:0004202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphosphingolipid phospholipase C, Css1","termid":"PBO:0004202"}


id: PBO:0065648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type B","termid":"PBO:0065648"}


id: PBO:0028865
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mRNA_level_during_vegetative_growth","termid":"PBO:0028865"}


id: GO:0010831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of myotube differentiation. Myotube differentiation is the process in which a relatively unspecialized cell acquires specialized features of a myotube cell. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myotube differentiation","termid":"GO:0010830"},{"relation_name":"is_a","term_name":"positive regulation of striated muscle cell differentiation","termid":"GO:0051155"},{"relation_name":"positively_regulates","term_name":"myotube differentiation","termid":"GO:0014902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myotube differentiation","termid":"GO:0010831"}


id: PBO:0088293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clathrin adaptor End4","termid":"PBO:0088293"}


id: FYPO:0002881
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to a greater extent than normal when the cell is subject to glucose starvation and oxidative stress simultaneously. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during glucose starvation","termid":"FYPO:0002878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased transcription during glucose starvation and oxidative stress","synonyms":[{"name":"increased transcription during glucose depletion and oxidative stress","type":"exact"},{"name":"increased transcription during glucose deprivation and oxidative stress","type":"exact"},{"name":"increased transcription during glucose limitation and oxidative stress","type":"exact"},{"name":"increased transcription in response to glucose starvation and oxidative stress","type":"exact"},{"name":"increased transcription in response to glucose starvation during oxidative stress","type":"exact"}],"termid":"FYPO:0002881"}


id: MONDO:0001257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal vascular disorder","termid":"MONDO:0002311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal microaneurysm","secondary_identifiers":["ICD9:362.14","SCTID:34037000","DOID:11295","MEDGEN:472899","UMLS:C0154834"],"termid":"MONDO:0001257","xrefs":{"Monarch":{"xref_id":"0001257"}}}


id: PBO:0078468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-His (anticodon GTG) 1-6","termid":"PBO:0078468"}


id: PR:Q92373
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A replication protein A 32 kDa subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13989:SF7","OMA:SCHPO04720","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor A protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1753.01c","secondary_identifiers":["UniProtKB:Q92373"],"synonyms":[{"name":"Spom972h-RPA2","type":"exact"},{"name":"single-stranded DNA-binding protein P30 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92373"}


id: PBO:0073748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 4","termid":"PBO:0073748"}


id: GO:0050503
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trehalose 6-phosphate + phosphate = glucose 6-phosphate + beta-D-glucose 1-phosphate.","definition_xrefs":["MetaCyc:2.4.1.216-RXN","EC:2.4.1.216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,4-alpha-oligoglucan phosphorylase activity","termid":"GO:0004645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"trehalose 6-phosphate phosphorylase activity","secondary_identifiers":["RHEA:20864"],"synonyms":[{"name":"trehalose 6-phosphate:phosphate beta-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0050503"}


id: PBO:0085449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Possible chaperone and cysteine protease; required for transcriptional reprogramming during the diauxic shift and for survival in stationary phase; similar to bacterial Hsp31 and yeast Hsp31p, Hsp32p, and Hsp33p; DJ-1/ThiJ/PfpI superfamily member; predicted involvement in pyridoxine metabolism; induced by mild heat stress and copper deprivation","termid":"PBO:0085449"}


id: PBO:0082599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clathrin coat accessory factor; involved in clathrin-mediated vesicle trafficking; may function to link the AP-1 clathrin adaptor complex with the Rab GTPase Ypt31p; has structural similarity to G-proteins; mouse homolog Aagab (p34) functionally complements irc6 null mutation; null mutant displays increased levels of spontaneous Rad52p foci","termid":"PBO:0082599"}


id: PBO:0063290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily B, 4","termid":"PBO:0063290"}


id: GO:0048764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a trichoblast cell to attain its fully functional state.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell maturation","termid":"GO:0048469"},{"relation_name":"part_of","term_name":"trichoblast differentiation","termid":"GO:0010054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trichoblast maturation","termid":"GO:0048764"}


id: PBO:0074084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 1","termid":"PBO:0074084"}


id: PBO:0003869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper transporting ATPase Ccc2 (predicted)","termid":"PBO:0003869"}


id: GO:0016345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of chromosomes in the center of the spindle towards the spindle poles, mediated by the shortening of microtubules attached to the chromosomes, during female meiosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome movement towards spindle pole","termid":"GO:0016344"},{"relation_name":"part_of","term_name":"female meiosis chromosome segregation","termid":"GO:0016321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0140013","GO:0007049","GO:0051179"],"is_obsolete":false,"name":"female meiotic chromosome movement towards spindle pole","synonyms":[{"name":"chromosome movement towards spindle pole during female meiosis","type":"exact"},{"name":"female meiotic chromosome movement","type":"broad"},{"name":"female meiotic chromosome movement to spindle pole","type":"exact"}],"termid":"GO:0016345"}


id: FYPO:0001440
data:
  {"alleles_by_uniquename":{"SJAG_03250:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03250","name":"sst4delta","uniquename":"SJAG_03250:allele-1"},"SJAG_04349:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04349","name":"vps28delta","uniquename":"SJAG_04349:allele-1"},"SJAG_04912:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04912","name":"vps25delta","uniquename":"SJAG_04912:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118840,118841,118842],"is_not":false,"summary":null,"term":"FYPO:0001440"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein complex is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03250":null,"SJAG_04349":null,"SJAG_04912":null},"genotype_count":3,"genotypes_by_uniquename":{"sst4delta":{"display_name":"sst4delta","display_uniquename":"sst4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03250:allele-1","expression":"Null"}]}]},"vps25delta":{"display_name":"vps25delta","display_uniquename":"vps25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04912:allele-1","expression":"Null"}]}]},"vps28delta":{"display_name":"vps28delta","display_uniquename":"vps28delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04349:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein complex localization","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03250","SJAG_04349","SJAG_04912"],"single_locus_genotype_uniquenames":["vps25delta","sst4delta","vps28delta"],"synonyms":[{"name":"abnormal cellular protein complex localization","type":"exact"},{"name":"abnormal protein complex localisation","type":"exact"},{"name":"abnormal protein complex localization during mitotic cell cycle","type":"related"},{"name":"abnormal protein complex localization during vegetative growth","type":"exact"}],"termid":"FYPO:0001440","terms_by_termid":{"FYPO:0001440":null,"FYPO_EXT:0000001":null,"GO:0000815":null}}


id: GO:0009932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Growth that occurs specifically at the tip of a cell.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unidimensional cell growth","termid":"GO:0009826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell tip growth","termid":"GO:0009932"}


id: MONDO:0010582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete diabetes insipidus, neurohypophyseal type, X-linked inheritance (obsolete MONDO:0010582)","secondary_identifiers":["OMIM:304900","DOID:0081059"],"synonyms":[{"name":"diabetes insipidus, neurohypophyseal type","type":"exact"}],"termid":"MONDO:0010582","xrefs":{"Monarch":{"xref_id":"0010582"}}}


id: GO:0018405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Keratan sulfate components are covalently linked to a core glycoprotein via O-glycosidic linkages between xylose and threonine residues.","definition_xrefs":["RESID:AA0247"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-keratan sulfate linkage via keratan sulfate D-glucuronyl-D-galactosyl-D-galactosyl-D-xylosyl-L-threonine (obsolete GO:0018405)","synonyms":[{"name":"protein-keratan sulphate linkage via keratan sulphate D-glucuronyl-D-galactosyl-D-galactosyl-D-xylosyl-L-threonine","type":"exact"}],"termid":"GO:0018405"}


id: PBO:0066536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSG2 antisense RNA 1","termid":"PBO:0066536"}


id: MONDO:0014022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any muscular dystrophy-dystroglycanopathy, type A in which the cause of the disease is a mutation in the RXYLT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type A","termid":"MONDO:0000171"},{"relation_name":"is_a","term_name":"muscle-eye-brain disease","termid":"MONDO:0018939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 10","secondary_identifiers":["GARD:15898","UMLS:C3554381","MEDGEN:767295","OMIM:615041","DOID:0111239"],"synonyms":[{"name":"MDDGA10","type":"related"},{"name":"RXYLT1 muscular dystrophy-dystroglycanopathy, type A","type":"exact"},{"name":"Walker-Warburg syndrome or muscle-eye-brain disease, Tmem5-related","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 10","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 10","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy, type A caused by mutation in RXYLT1","type":"exact"}],"termid":"MONDO:0014022","xrefs":{"Monarch":{"xref_id":"0014022"}}}


id: MONDO:0018320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"excluded_subClassOf","term_name":"microcephaly, epilepsy, and diabetes syndrome 1","termid":"MONDO:0031481"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary microcephaly-mild intellectual disability-young-onset diabetes syndrome","secondary_identifiers":["MEDGEN:1675765","GARD:17620","UMLS:C5190597","Orphanet:391408"],"termid":"MONDO:0018320","xrefs":{"Monarch":{"xref_id":"0018320"}}}


id: GO:0031242
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of a cell outer membrane consisting of gene products and protein complexes that are loosely bound to its external surface, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of cell outer membrane","termid":"GO:0031244"},{"relation_name":"part_of","term_name":"external side of cell outer membrane","termid":"GO:0031240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrinsic component of external side of cell outer membrane","synonyms":[{"name":"extrinsic to external leaflet of cell outer membrane","type":"exact"},{"name":"extrinsic to external side of cell outer membrane","type":"narrow"},{"name":"extrinsic to external side of outer membrane","type":"exact"}],"termid":"GO:0031242"}


id: FYPO:0001930
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to gamma radiation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to stress during vegetative growth","termid":"FYPO:0001341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000298"],"is_obsolete":false,"name":"abnormal cellular response to gamma radiation","synonyms":[{"name":"abnormal cellular response to gamma radiation during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to gamma radiation during vegetative growth","type":"exact"},{"name":"abnormal sensitivity to gamma radiation","type":"exact"}],"termid":"FYPO:0001930"}


id: PBO:0053220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LGALSL divergent transcript","termid":"PBO:0053220"}


id: MONDO:0002346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant histiocytic disease (obsolete MONDO:0002346)","termid":"MONDO:0002346","xrefs":{"Monarch":{"xref_id":"0002346"}}}


id: PBO:0047769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box A1","termid":"PBO:0047769"}


id: PBO:0057524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 642a","termid":"PBO:0057524"}


id: GO:1905070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of an anterior visceral endoderm cell from one site to another.","definition_xrefs":["GO_REF:0000091","PMID:17078044","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior visceral endoderm cell migration","termid":"GO:1905070"}


id: PBO:0079671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 V2 pseudogene 1","termid":"PBO:0079671"}


id: PBO:0073162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC62 antisense RNA 1","termid":"PBO:0073162"}


id: PBO:0001850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c1 heme lyase (predicted)","termid":"PBO:0001850"}


id: MONDO:0019882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal trisomy 8q is a rare chromosomal anomaly syndrome resulting from the partial duplication of the long arm of chromosome 8, with a highly variable phenotype, typically characterized by growth and developmental delay, intellectual disability, short stature, craniofacial dysmorphism (microcephaly, prominent forehead, hypertelorism, abnormal palpebral fissures, low-set, large ears, anteverted tip of nose, micro/retrognathia), congenital heart defects and skeletal and limb anomalies. Other reported features include ophthalmologic abnormalities (e.g. megalocornea), cryptorchidism, hypertrichosis, and neurologic manifestations (e.g. hypotonia, hearing loss, and seizures).","definition_xrefs":["Orphanet:96100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 8","termid":"MONDO:0016959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 8q","secondary_identifiers":["UMLS:C4706365","MEDGEN:1637956","GARD:19315","SCTID:763277009"],"synonyms":[{"name":"distal duplication 8q","type":"exact"},{"name":"distal trisomy type 8q","type":"exact"},{"name":"telomeric duplication 8q","type":"exact"},{"name":"trisomy 8qter","type":"exact"}],"termid":"MONDO:0019882","xrefs":{"Monarch":{"xref_id":"0019882"}}}


id: PR:G2TRL3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsa3 gene.","definition_xrefs":["UniProtKB:G2TRL3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome assembly protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.19","synonyms":[{"name":"Spom972h-rsa3","type":"exact"}],"termid":"PR:G2TRL3"}


id: GO:1900876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nonadec-1-ene.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene metabolic process","termid":"GO:0043449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nonadec-1-ene metabolic process","synonyms":[{"name":"nonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900876"}


id: GO:0046069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cyclic GMP, guanosine 3',5'-phosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"cyclic nucleotide catabolic process","termid":"GO:0009214"},{"relation_name":"is_a","term_name":"cGMP metabolic process","termid":"GO:0046068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"cGMP catabolic process","synonyms":[{"name":"cGMP breakdown","type":"exact"},{"name":"cGMP catabolism","type":"exact"},{"name":"cGMP degradation","type":"exact"}],"termid":"GO:0046069"}


id: PBO:0109641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid early transcript 1M (pseudogene)","termid":"PBO:0109641"}


id: SO:0002034
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A snoRNA primary transcript that also encodes pre-miR sequence that is processed to form functionally active miRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"pre_miRNA","termid":"SO:0001244"},{"relation_name":"is_a","term_name":"snoRNA_primary_transcript","termid":"SO:0000232"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miR_encoding_snoRNA_primary_transcript","synonyms":[{"name":"miR encoding snoRNA primary transcript","type":"exact"}],"termid":"SO:0002034"}


id: PR:O13642
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lipoyl synthase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10949:SF0","PRO:DNx","OMA:SCHPO02841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoyl synthase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.15","secondary_identifiers":["UniProtKB:O13642"],"synonyms":[{"name":"LS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Lip-syn (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-LIAS","type":"exact"},{"name":"lipoate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"lipoic acid synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13642"}


id: PBO:0090600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial (zinc or iron) ion transmembrane transporter Mmt1","termid":"PBO:0090600"}


id: MONDO:1010159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Split hand that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"split hand, non-human animal","secondary_identifiers":["OMIA:000942"],"termid":"MONDO:1010159","xrefs":{"Monarch":{"xref_id":"1010159"}}}


id: MOD:02040
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-alanine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-alanine residue","synonyms":[{"name":"XlnkAla","type":"exact"}],"termid":"MOD:02040"}


id: PBO:0039717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B mRNA editing enzyme catalytic subunit 3A","termid":"PBO:0039717"}


id: PBO:0000189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc20/Fizzy subfamily","termid":"PBO:0000189"}


id: GO:0034122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor signaling pathway.","definition_xrefs":["PMID:16551253","GOC:add","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor signaling pathway","termid":"GO:0034121"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor signaling pathway","termid":"GO:0002224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of toll-like receptor signaling pathway","synonyms":[{"name":"negative regulation of TLR signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0034122"}


id: PBO:0078391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 1-6","termid":"PBO:0078391"}


id: MONDO:0006384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary effusion lymphoma (obsolete MONDO:0006384)","termid":"MONDO:0006384","xrefs":{"Monarch":{"xref_id":"0006384"}}}


id: GO:1901915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of capsule organization.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of capsule organization","termid":"GO:1901913"},{"relation_name":"positively_regulates","term_name":"capsule organization","termid":"GO:0045230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of capsule organization","synonyms":[{"name":"activation of capsule organisation","type":"narrow"},{"name":"activation of capsule organization","type":"narrow"},{"name":"activation of capsule organization and biogenesis","type":"related"},{"name":"positive regulation of capsule organisation","type":"exact"},{"name":"positive regulation of capsule organization and biogenesis","type":"related"},{"name":"up regulation of capsule organisation","type":"exact"},{"name":"up regulation of capsule organization","type":"exact"},{"name":"up regulation of capsule organization and biogenesis","type":"related"},{"name":"up-regulation of capsule organisation","type":"exact"},{"name":"up-regulation of capsule organization","type":"exact"},{"name":"up-regulation of capsule organization and biogenesis","type":"related"},{"name":"upregulation of capsule organisation","type":"exact"},{"name":"upregulation of capsule organization","type":"exact"},{"name":"upregulation of capsule organization and biogenesis","type":"related"}],"termid":"GO:1901915"}


id: MONDO:0009860
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenformin 4-hydroxylation","secondary_identifiers":["UMLS:C1849927","MEDGEN:342365","OMIM:261590"],"synonyms":[{"name":"phenformin 4-hydroxylation","type":"exact"}],"termid":"MONDO:0009860","xrefs":{"Monarch":{"xref_id":"0009860"}}}


id: GO:0047071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione + O2 = 3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1(10),2-dien-4-oate + H+.","definition_xrefs":["RHEA:21352","EC:1.13.11.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione 4,5-dioxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r1151","KEGG_REACTION:R04597","MetaCyc:1.13.11.25-RXN"],"synonyms":[{"name":"3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione:oxygen 4,5-oxidoreductase (decyclizing)","type":"related"},{"name":"3-alkylcatechol 2,3-dioxygenase activity","type":"related"},{"name":"steroid 4,5-dioxygenase activity","type":"broad"}],"termid":"GO:0047071"}


id: PBO:0042288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD2AP divergent transcript","termid":"PBO:0042288"}


id: PBO:0047588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor receptor like 1","termid":"PBO:0047588"}


id: PBO:0002567
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the sequence previously referred to as SPAC27D7.10c was a duplication caused by missassembly of the cosmid","termid":"PBO:0002567"}


id: FYPO:0002620
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing trichostatin A.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002060","FYPO:0000003","FYPO:0002058","FYPO:0002057","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on trichostatin A","synonyms":[{"name":"normal cell population growth in presence of trichostatin A","type":"exact"},{"name":"normal cell population growth on trichostatin A","type":"exact"},{"name":"normal cellular response to trichostatin A","type":"related"},{"name":"normal vegetative cell population growth on trichostatin A","type":"exact"}],"termid":"FYPO:0002620"}


id: PBO:0039601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acidic nuclear phosphoprotein 32 family member B pseudogene 2","termid":"PBO:0039601"}


id: PBO:0008425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, implicated in vesicle-mediated transport","termid":"PBO:0008425"}


id: MONDO:0018870
data:
  {"annotated_genes":["SJAG_01344","SJAG_05213","SJAG_03785"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86140,86141,86139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013768"}]},"cv_name":"mondo","definition":"Idiopathic arterial calcification of infancy is a rare condition characterized by extensive calcification and stenosis of the large and medium sized arteries.","definition_xrefs":["Orphanet:51608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_03785":null,"SJAG_05213":null},"genotype_count":0,"is_obsolete":false,"name":"arterial calcification of infancy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0050644","MEDGEN:395331","OMIMPS:208000","UMLS:C1859727","GARD:8380","NORD:2001","MESH:C537440"],"synonyms":[{"name":"Generalized Arterial Calcification of Infancy","type":"exact"},{"name":"IIAC","type":"related"},{"name":"generalised arterial calcification in infancy","type":"related"},{"name":"generalised arterial calcification of infancy","type":"exact"},{"name":"generalized arterial calcification in infancy","type":"related"},{"name":"generalized arterial calcification of infancy","type":"exact"},{"name":"idiopathic infantile arterial calcification","type":"exact"},{"name":"idiopathic obliterative arteriopathy","type":"exact"},{"name":"infantile arteriosclerosis","type":"exact"},{"name":"occlusive infantile arteriopathy","type":"exact"}],"termid":"MONDO:0018870","terms_by_termid":{"MONDO:0013768":null},"xrefs":{"Monarch":{"xref_id":"0018870"}}}


id: MONDO:0100255
data:
  {"annotated_genes":["SJAG_01070"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85122],"is_not":false,"summary":null,"term":"MONDO:0100255"}]},"cv_name":"mondo","definition":"A rare inborn error of metabolism characterized by persistent hypermethioninemia with increased levels of S-adenosylmethionine and S-adenosylhomocysteine which manifests with encephalopathy, severe global developmental delay, mild to severe liver dysfunction, hypotonia and facial dysmorphism (most significant is frontal bossing, macrocephaly, hypertelorism and depressed nasal bridge). Epileptic seizures, hypoglycemia and/or cardiac defects (pulmonary stenosis, atrial and/or ventricular septal defect, coarctation of the aorta) may be associated. Clinical picture may range from neurological symptoms only to multi-organ involvement.","definition_xrefs":["PMID:33309011","PMID:30477030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of methionine catabolism","termid":"MONDO:0000351"},{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01070":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0037792","MONDO:0006025"],"is_obsolete":false,"name":"adenosine kinase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17321","OMIM:611094","Orphanet:289290","MEDGEN:1632232","UMLS:C4706555","DOID:0111038","MESH:C567015","OMIM:614300"],"synonyms":[{"name":"ADK deficiency","type":"exact"},{"name":"ADK hypermethioninemia","type":"exact"},{"name":"MRT8","type":"exact"},{"name":"adenosine kinase deficiency","type":"exact"},{"name":"autosomal recessive intellectual disability 8","type":"exact"},{"name":"autosomal recessive mental retardation 8","type":"exact"},{"name":"hypermethioninemia due to adenosine kinase deficiency","type":"exact"},{"name":"hypermethioninemia encephalopathy due to ADK deficiency","type":"exact"},{"name":"hypermethioninemia encephalopathy due to adenosine kinase deficiency","type":"exact"},{"name":"mental retardation, autosomal recessive 8","type":"related"},{"name":"mental retardation, autosomal recessive 8, formerly","type":"related"},{"name":"mental retardation, autosomal recessive 8; MRT8","type":"related"}],"termid":"MONDO:0100255","terms_by_termid":{"MONDO:0100255":null},"xrefs":{"Monarch":{"xref_id":"0100255"}}}


id: PBO:0090006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex subunit Rpc34","termid":"PBO:0090006"}


id: PBO:0065204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRP38 domain containing A pseudogene 1","termid":"PBO:0065204"}


id: PBO:0073277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 11","termid":"PBO:0073277"}


id: GO:0002076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"osteoblast differentiation","termid":"GO:0001649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"osteoblast development","termid":"GO:0002076"}


id: PBO:0065437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1 pseudogene 10","termid":"PBO:0065437"}


id: PR:Q9P7U7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fub2 gene.","definition_xrefs":["UniProtKB:Q9P7U7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P4G3.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4G3.03","synonyms":[{"name":"Spom972h-fub2","type":"exact"}],"termid":"PR:Q9P7U7"}


id: PBO:0066619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIB43A domain with coiled-coils 1","termid":"PBO:0066619"}


id: GO:0097002
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the mitochondrial inner membrane that is not invaginated to form cristae. The inner boundary membrane lies parallel to the outer membrane.","definition_xrefs":["GOC:mcc","PMID:16054341","PMID:19019989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitochondrial inner membrane","termid":"GO:0005743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005739"],"is_obsolete":false,"name":"mitochondrial inner boundary membrane","secondary_identifiers":["NIF_Subcellular:sao18461326"],"synonyms":[{"name":"inner bounding mitochondrial membrane","type":"exact"}],"termid":"GO:0097002"}


id: GO:1904956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of midbrain dopaminergic neuron differentiation.","definition_xrefs":["GOC:TermGenie","GOC:PARL","GO_REF:0000058","GOC:bf","PMID:21347250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dopaminergic neuron differentiation","termid":"GO:1904338"},{"relation_name":"regulates","term_name":"midbrain dopaminergic neuron differentiation","termid":"GO:1904948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of midbrain dopaminergic neuron differentiation","synonyms":[{"name":"regulation of DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of mDA neuron differentiation","type":"exact"},{"name":"regulation of midbrain DA neurogenesis","type":"exact"},{"name":"regulation of midbrain dopaminergic neuron production","type":"exact"}],"termid":"GO:1904956"}


id: PBO:0078857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC6 pseudogene 5","termid":"PBO:0078857"}


id: PBO:0070620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1 pseudogene 4","termid":"PBO:0070620"}


id: FYPO:0004952
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the prospore membrane begins to form and enclose the nucleus, but the leading edge does not close completely, leaving a gap in the membrane.","definition_xrefs":["PomBase:mah","PMID:17951524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal prospore membrane formation","termid":"FYPO:0001914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0000121"],"is_obsolete":false,"name":"incomplete prospore membrane closure","synonyms":[{"name":"incomplete enclosure of nucleus by forespore membrane","type":"related"},{"name":"incomplete engulfment of nucleus by forespore membrane","type":"related"},{"name":"incomplete forespore membrane closure","type":"exact"}],"termid":"FYPO:0004952"}


id: PBO:0111917
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENA/THI domain","termid":"PBO:0111917"}


id: PBO:0017904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NST UDP-N-acetylglucosamine transmembrane transporter (predicted)","termid":"PBO:0017904"}


id: MOD:00045
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to pros-phospho-L-histidine (N-pi-phospho-L-histidine, 3'-phospho-L-histidine).","definition_xrefs":["PubMed:7669763","PubMed:5642389","PubMed:6692818","PubMed:7803390","PubMed:1549615","RESID:AA0036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylated L-histidine","termid":"MOD:00890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"3'-phospho-L-histidine","synonyms":[{"name":"(2S)-2-amino-3-(3-phosphono-3H-imidazol-4-yl)propanoic acid","type":"exact"},{"name":"2-azanyl-3-(3-phosphono-3H-imidazol-4-yl)propanoic acid","type":"exact"},{"name":"3'-phospho-L-histidine","type":"exact"},{"name":"ACT_SITE Pros-phosphohistidine intermediate","type":"exact"},{"name":"MOD_RES Pros-phosphohistidine","type":"exact"},{"name":"N(pi)-phosphohistidine","type":"exact"},{"name":"N3-phosphonohistidine","type":"exact"},{"name":"ND1-phosphonohistidine","type":"exact"},{"name":"NpPHis","type":"exact"},{"name":"Npi-phosphorylated L-histidine","type":"exact"},{"name":"Phospho","type":"related"},{"name":"Phosphorylation","type":"related"},{"name":"histidine-1-phosphate","type":"related"},{"name":"histidine-N(delta)-phosphate","type":"exact"},{"name":"histidine-N3'-phosphate","type":"exact"},{"name":"pros-phosphohistidine","type":"exact"}],"termid":"MOD:00045"}


id: PBO:0069208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 463, pseudogene","termid":"PBO:0069208"}


id: GO:0106433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction O6-methyl-dGTP + H2O = O6-methyl-dGMP + diphosphate + H+.","definition_xrefs":["PMID:30304478","RHEA:67600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides","termid":"GO:0016818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"O6-methyl-dGTP hydrolase activity","termid":"GO:0106433"}


id: PBO:0041440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C9orf72-SMCR8 complex subunit","termid":"PBO:0041440"}


id: GO:0036203
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10beta-hydroxytaxa-4(20),11-dien-5alpha-yl acetate + O2 + NADPH + H+ = 10beta,14beta-dihydroxytaxa-4(20),11-dien-5alpha-yl acetate + NADP+ + H2O.","definition_xrefs":["EC:1.14.13.146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"taxoid 14-beta-hydroxylase activity","secondary_identifiers":["RHEA:31971","KEGG_REACTION:R09867"],"termid":"GO:0036203"}


id: PBO:0035831
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4_acetylation_during_vegetative_growth","termid":"PBO:0035831"}


id: MONDO:0035824
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLHL7-related cold-induced sweating-like syndrome","secondary_identifiers":["GARD:22437","Orphanet:603694","UMLS:C5680211","MEDGEN:1842368"],"synonyms":[{"name":"KLHL7-related Crisponi-like syndrome","type":"exact"}],"termid":"MONDO:0035824","xrefs":{"Monarch":{"xref_id":"0035824"}}}


id: MONDO:0012095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intellectual disability-brachydactyly-Pierre Robin syndrome is a rare developmental defect during embryogenesis characterized by mild to moderate intellectual disability and phsychomotor delay, Robin sequence (incl. severe micrognathia and soft palate cleft) and distinct dysmorphic facial features (e.g. synophris, short palpebral fissures, hypertelorism, small, low-set, and posteriorly angulated ears, bulbous nose, long/flat philtrum, and bow-shaped upper lip). Skeletal anomalies, such as brachydactyly, clinodactyly, small hands and feet, and oral manifestations (e.g. bifid, short tongue, oligodontia) are also associated. Additional features reported include microcephaly, capillary hemangiomas on face and scalp, ventricular septal defect, corneal clouding, nystagmus and profound sensorineural deafness.","definition_xrefs":["Orphanet:364577"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"intellectual disability-brachydactyly-Pierre Robin syndrome","secondary_identifiers":["MESH:C563880","GARD:17583","OMIM:608670","MEDGEN:325196","UMLS:C1837564"],"synonyms":[{"name":"ROBIN sequence with distinctive facial appearance and brachydactyly","type":"related"}],"termid":"MONDO:0012095","xrefs":{"Monarch":{"xref_id":"0012095"}}}


id: PBO:0044889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEP domain containing 1B","termid":"PBO:0044889"}


id: GO:0001573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ceramide oligosaccharides carrying in addition to other sugar residues, one or more sialic acid residues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ceramide metabolic process","termid":"GO:0006672"},{"relation_name":"is_a","term_name":"glycosphingolipid metabolic process","termid":"GO:0006687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"ganglioside metabolic process","synonyms":[{"name":"ganglioside metabolism","type":"exact"}],"termid":"GO:0001573"}


id: GO:0150145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CD80 biosynthetic process.","definition_xrefs":["GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glycoprotein biosynthetic process","termid":"GO:0010560"},{"relation_name":"is_a","term_name":"regulation of CD80 production","termid":"GO:0150143"},{"relation_name":"positively_regulates","term_name":"CD80 biosynthetic process","termid":"GO:0035780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of CD80 production","synonyms":[{"name":"positive regulation of CD80 biosynthetic process","type":"exact"}],"termid":"GO:0150145"}


id: PBO:0049191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor AMPA type subunit 2","termid":"PBO:0049191"}


id: PBO:0082767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the sorting and assembly machinery (SAM) complex; the SAM (or TOB) complex is located in the mitochondrial outer membrane; the complex binds precursors of beta-barrel proteins and facilitates their insertion into the outer membrane","termid":"PBO:0082767"}


id: GO:0018992
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of sex and sexual phenotype in an organism's germ line.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex determination","termid":"GO:0007530"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ-line sex determination","termid":"GO:0018992"}


id: GO:0010328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of auxin, from one side of a membrane to the other, into a cell.","definition_xrefs":["PMID:16839804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin transmembrane transporter activity","termid":"GO:0080161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"auxin influx transmembrane transporter activity","synonyms":[{"name":"auxin influx facilitator","type":"related"}],"termid":"GO:0010328"}


id: PBO:0068455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 31, pseudogene","termid":"PBO:0068455"}


id: GO:0010298
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydrocamalexic acid = camalexin + CO2 + H+.","definition_xrefs":["PMID:16766671","MetaCyc:RXN-8275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"dihydrocamalexic acid decarboxylase activity","secondary_identifiers":["RHEA:34807"],"termid":"GO:0010298"}


id: PBO:0003263
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"itty bitty phosphatase","termid":"PBO:0003263"}


id: MONDO:0021138
data:
  {"annotated_genes":["SJAG_01013","SJAG_03453","SJAG_01748","SJAG_01349","SJAG_05979","SJAG_03905"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86848,86847,86693,86692,86694,86695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"}]},"cv_name":"mondo","definition":"Malignant neoplasms that either originate from the bone marrow (e.g. myeloid leukemias) or involve the bone marrow as secondary-metastatic tumors (e.g. metastatic carcinomas to the bone marrow). --2003","definition_xrefs":["NCIT:C35501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system cancer","termid":"MONDO:0000621"},{"relation_name":"is_a","term_name":"bone cancer","termid":"MONDO:0002129"},{"relation_name":"is_a","term_name":"bone marrow neoplasm","termid":"MONDO:0005374"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01013":null,"SJAG_01349":null,"SJAG_01748":null,"SJAG_03453":null,"SJAG_03905":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"bone marrow cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:438070","UMLS:C2703042"],"synonyms":[{"name":"bone marrow cancer","type":"exact"},{"name":"cancer of bone marrow","type":"exact"},{"name":"malignant bone marrow neoplasm","type":"exact"},{"name":"malignant bone marrow tumor","type":"exact"},{"name":"malignant bone marrow tumour","type":"exact"},{"name":"malignant neoplasm of bone marrow","type":"exact"}],"termid":"MONDO:0021138","terms_by_termid":{"MONDO:0018874":null},"xrefs":{"Monarch":{"xref_id":"0021138"}}}


id: FYPO:0000608
data:
  {"alleles_by_uniquename":{"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"}],"single_locus_phenotype":[{"annotations":[119066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in M phase under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal mitosis","termid":"FYPO:0000337"},{"relation_name":"is_a","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"},{"relation_name":"is_a","term_name":"abnormal mitotic M phase progression","termid":"FYPO:0000607"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00871":null,"SJAG_04284":null,"SJAG_04464":null},"genotype_count":2,"genotypes_by_uniquename":{"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_00871","SJAG_04464"],"name":"abnormal cell cycle arrest in mitotic M phase","references_by_uniquename":{"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_04284"],"single_locus_genotype_uniquenames":["nup61delta"],"synonyms":[{"name":"abnormal cell cycle arrest in M phase during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic M phase during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle arrest in M phase","type":"exact"},{"name":"abnormal mitotic cell cycle arrest with condensed chromosomes","type":"related"},{"name":"abnormal mitotic nuclear division arrest","type":"exact"},{"name":"mitotic cell cycle arrest in M-phase","type":"exact"},{"name":"mitotic cell cycle progression in M phase: arrested","type":"related"}],"termid":"FYPO:0000608","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000619":null,"FYPO_EXT:0000001":null}}


id: PBO:0066760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 58","termid":"PBO:0066760"}


id: PBO:0109316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair WLM domain metallopeptidase Wss1","termid":"PBO:0109316"}


id: PR:O94389
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coiled-coil domain-containing protein 124 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03327","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain-containing protein 124 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.12","secondary_identifiers":["UniProtKB:O94389"],"synonyms":[{"name":"Spom972h-CCDC124","type":"exact"}],"termid":"PR:O94389"}


id: PR:Q9P7F1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2E1P3.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7F1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate-binding domain-containing protein C2E1P3.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E1P3.05c","synonyms":[{"name":"Spom972h-SPAC2E1P3.05c","type":"exact"}],"termid":"PR:Q9P7F1"}


id: MONDO:0016582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital mitral malformation","secondary_identifiers":["GARD:1495","UMLS:C5680882","MEDGEN:1842184","Orphanet:2447"],"termid":"MONDO:0016582","xrefs":{"Monarch":{"xref_id":"0016582"}}}


id: PBO:0063808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylase kinase catalytic subunit gamma 1","termid":"PBO:0063808"}


id: PBO:0028295
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_dioxygenase_activity","termid":"PBO:0028295"}


id: MOD:00825
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-phenylalanine residue and an L-cysteine residue by a thioester bond to form S-(L-phenylalaninyl)-L-cysteine.","definition_xrefs":["PubMed:12591958","RESID:AA0414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioester crosslinked residues","termid":"MOD:00395"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(L-phenylalanyl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2S)-2-amino-3-phenylpropanoyl]sulfanyl)propanoic acid","type":"exact"},{"name":"CROSSLNK Phenylalanyl cysteine thioester (Cys-Phe)","type":"exact"},{"name":"S-(2-amino-3-phenylpropanoyl)cysteine","type":"exact"},{"name":"S-(L-phenylalanyl)-L-cysteine","type":"exact"},{"name":"XLNK1PheSCys","type":"exact"},{"name":"phenylalanine cysteine thioester","type":"exact"}],"termid":"MOD:00825"}


id: SO:0002140
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An origin of replication that initiates early in S phase.","definition_xrefs":["PMID:9115207","PMID:23348837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin_of_replication","termid":"SO:0000296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early_origin_of_replication","synonyms":[{"name":"early origin","type":"exact"},{"name":"early origin of replication","type":"exact"},{"name":"early replication origin","type":"exact"}],"termid":"SO:0002140"}


id: FYPO:0003638
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of ADP binding by a gene product (usually a protein) in a mutant is increased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ADP binding","termid":"FYPO:0003637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"increased ADP binding","termid":"FYPO:0003638"}


id: GO:0002669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of T cell anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell tolerance induction","termid":"GO:0002666"},{"relation_name":"is_a","term_name":"regulation of T cell anergy","termid":"GO:0002667"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte anergy","termid":"GO:0002913"},{"relation_name":"positively_regulates","term_name":"T cell anergy","termid":"GO:0002870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell anergy","synonyms":[{"name":"activation of T cell anergy","type":"narrow"},{"name":"positive regulation of T lymphocyte anergy","type":"exact"},{"name":"positive regulation of T-cell anergy","type":"exact"},{"name":"positive regulation of T-lymphocyte anergy","type":"exact"},{"name":"stimulation of T cell anergy","type":"narrow"},{"name":"up regulation of T cell anergy","type":"exact"},{"name":"up-regulation of T cell anergy","type":"exact"},{"name":"upregulation of T cell anergy","type":"exact"}],"termid":"GO:0002669"}


id: PBO:0049563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B.L histone variant 1, pseudogene","termid":"PBO:0049563"}


id: PBO:0033788
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_metaphase_chromosome_recapture","termid":"PBO:0033788"}


id: MONDO:0017908
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hyperekplexia (obsolete MONDO:0017908)","termid":"MONDO:0017908","xrefs":{"Monarch":{"xref_id":"0017908"}}}


id: PBO:0068145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 452","termid":"PBO:0068145"}


id: PBO:0012044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homocitrate synthase","termid":"PBO:0012044"}


id: PBO:0067144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 192, pseudogene","termid":"PBO:0067144"}


id: GO:0021819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The detachment of cells from radial glial fibers at the appropriate time when they cease to migrate and form distinct layer in the cerebral cortex.","definition_xrefs":["GOC:jid","PMID:12626695","GOC:cls","GO_REF:0000021","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"cerebral cortex radial glia-guided migration","termid":"GO:0021801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"layer formation in cerebral cortex","synonyms":[{"name":"cerebral cortex lamination","type":"related"}],"termid":"GO:0021819"}


id: MONDO:0003712
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"angiokeratoma","termid":"MONDO:0003143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"angiokeratoma of mibelli","secondary_identifiers":["NCIT:C3927","SCTID:62727008","icd11.foundation:989688835","MEDGEN:78100","UMLS:C0263640","DOID:5948"],"termid":"MONDO:0003712","xrefs":{"Monarch":{"xref_id":"0003712"}}}


id: PBO:0049804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hematopoietic cell signal transducer","termid":"PBO:0049804"}


id: PBO:0055980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat neuronal 3","termid":"PBO:0055980"}


id: GO:1900509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of pentose catabolic process to ethanol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of pentose catabolic process to ethanol (obsolete GO:1900509)","synonyms":[{"name":"regulation of pentose catabolism to ethanol","type":"exact"}],"termid":"GO:1900509"}


id: FYPO:0006410
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of nitric oxide measured in a cell is lower than normal when the population in which the cell is found is in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered cellular nitric oxide level","termid":"FYPO:0006408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular nitric oxide level during stationary phase","synonyms":[{"name":"decreased cellular NO level during stationary phase","type":"exact"},{"name":"decreased cellular nitric oxide level in stationary phase","type":"exact"},{"name":"decreased nitric oxide accumulation during stationary phase","type":"related"},{"name":"reduced cellular nitric oxide level during stationary phase","type":"exact"}],"termid":"FYPO:0006410"}


id: PBO:0054742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2151","termid":"PBO:0054742"}


id: PR:O74549
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A NEDD8-conjugating enzyme Ubc12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04749","PANTHER:PTHR24067:SF17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8-conjugating enzyme ubc12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.10c","secondary_identifiers":["UniProtKB:O74549"],"synonyms":[{"name":"RUB1-conjugating enzyme (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RUB1-protein ligase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-UBE2M","type":"exact"},{"name":"ubiquitin carrier protein 12 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74549"}


id: PBO:0083993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutathione peroxidase; functions as hydroperoxide receptor to sense intracellular hydroperoxide levels and transduce redox signal to Yap1p transcription factor; glutathione peroxidase activity is neuroprotective in models of Huntington's disease; HYR1 has a paralog, GPX1, that arose from the whole genome duplication","termid":"PBO:0083993"}


id: GO:0047853
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + bis-D-fructose 2',1:2,1'-dianhydride = inulobiose.","definition_xrefs":["MetaCyc:DIFRUCTOSE-ANHYDRIDE-SYNTHASE-RXN","RHEA:15041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"difructose-anhydride synthase activity","secondary_identifiers":["EC:4.2.1.179"],"synonyms":[{"name":"bis-D-fructose 2',1:2,1'-dianhydride fructohydrolase activity","type":"related"},{"name":"inulobiose hydrolase activity","type":"related"}],"termid":"GO:0047853"}


id: GO:0019884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses antigen (peptide or lipid) of exogenous origin on its cell surface in association with an MHC protein complex.","definition_xrefs":["PMID:15771591","PMID:15928678","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of exogenous antigen","synonyms":[{"name":"antigen presentation, exogenous antigen","type":"exact"}],"termid":"GO:0019884"}


id: MONDO:0001406
data:
  {"annotated_genes":["SJAG_01111","SJAG_00260","SJAG_04213","SJAG_03163","SJAG_01671","SJAG_01895","SJAG_03920","SJAG_02398"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008192"},{"annotations":[86508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011121"},{"annotations":[86418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011544"},{"annotations":[85121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007273"},{"annotations":[85330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013602"},{"annotations":[86654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032771"},{"annotations":[86798,86797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024517"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm arising from a peripheral nerve or the perineural sheaths.","definition_xrefs":["NCIT:C3321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral nervous system disorder","termid":"MONDO:0003620"},{"relation_name":"is_a","term_name":"nervous system neoplasm","termid":"MONDO:0021248"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01111":null,"SJAG_01671":null,"SJAG_01895":null,"SJAG_02398":null,"SJAG_03163":null,"SJAG_03920":null,"SJAG_04213":null},"genotype_count":0,"is_obsolete":false,"name":"peripheral nervous system neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D010524","UMLS:C0031118","ICD9:239.2","ONCOTREE:PNS","EFO:0002431","SCTID:126980002","MEDGEN:45817","DOID:1192"],"synonyms":[{"name":"CNS-excluded nervous sys. cancer","type":"narrow"},{"name":"PNS neoplasm","type":"exact"},{"name":"PNS neoplasms","type":"exact"},{"name":"PNS tumor","type":"exact"},{"name":"PNS tumour","type":"exact"},{"name":"neoplasm of PNS","type":"exact"},{"name":"neoplasm of peripheral nerve","type":"exact"},{"name":"neoplasm of peripheral nervous system","type":"exact"},{"name":"neoplasm of the PNS","type":"exact"},{"name":"neoplasm of the peripheral nerve","type":"exact"},{"name":"neoplasm of the peripheral nervous system","type":"exact"},{"name":"neoplasms, PNS","type":"exact"},{"name":"neoplasms, peripheral nervous system","type":"exact"},{"name":"nerve sheath neoplasm","type":"narrow"},{"name":"nerve sheath tumors","type":"narrow"},{"name":"nerve sheath tumours","type":"narrow"},{"name":"peripheral nerve neoplasm","type":"exact"},{"name":"peripheral nerve tumor","type":"exact"},{"name":"peripheral nerve tumour","type":"exact"},{"name":"peripheral nervous system neoplasm","type":"exact"},{"name":"peripheral nervous system neoplasm (disease)","type":"exact"},{"name":"peripheral nervous system tumor","type":"exact"},{"name":"peripheral nervous system tumour","type":"exact"},{"name":"tumor of PNS","type":"exact"},{"name":"tumor of peripheral nerve","type":"exact"},{"name":"tumor of peripheral nervous system","type":"exact"},{"name":"tumor of the PNS","type":"exact"},{"name":"tumor of the peripheral nerve","type":"exact"},{"name":"tumor of the peripheral nervous system","type":"exact"},{"name":"tumour of PNS","type":"exact"},{"name":"tumour of peripheral nerve","type":"exact"},{"name":"tumour of peripheral nervous system","type":"exact"},{"name":"tumour of the PNS","type":"exact"},{"name":"tumour of the peripheral nerve","type":"exact"},{"name":"tumour of the peripheral nervous system","type":"exact"}],"termid":"MONDO:0001406","terms_by_termid":{"MONDO:0007273":null,"MONDO:0008192":null,"MONDO:0011121":null,"MONDO:0011544":null,"MONDO:0013602":null,"MONDO:0024517":null,"MONDO:0032771":null},"xrefs":{"Monarch":{"xref_id":"0001406"}}}


id: PR:Q9UUF0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxisome biogenesis factor 10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23350:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisome biogenesis factor 10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.10","secondary_identifiers":["UniProtKB:Q9UUF0"],"synonyms":[{"name":"Spom972h-PEX10","type":"exact"},{"name":"peroxin-10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"peroxisomal biogenesis factor 10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"peroxisome assembly protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pi036","type":"related"}],"termid":"PR:Q9UUF0"}


id: PBO:0051379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 6-21 (non-functional)","termid":"PBO:0051379"}


id: PR:O14111
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psd3 gene.","definition_xrefs":["UniProtKB:O14111","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylserine decarboxylase proenzyme 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.15","synonyms":[{"name":"Spom972h-psd3","type":"exact"}],"termid":"PR:O14111"}


id: MONDO:0022648
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A specific change in the MTTK gene causes a condition characterized by weakened heart muscle (cardiomyopathy) and hearing loss. Affected individuals may also have myopathy and ataxia. This mutation replaces the DNA building block (nucleotide) guanine with the nucleotide adenine at position 8363 (written as G8363A) within the gene. It is unclear how this alteration in the MTTK gene results in cardiomyopathy, hearing loss, and other symptoms.","definition_xrefs":["GARD:0001108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyopathy and deafness due to tRNA lysine gene mutation","secondary_identifiers":["HGNC:7489","GTR:AN0103738","GTR:AN0103739"],"synonyms":[{"name":"cardiomyopathy and deafness due to MTTK gene mutation","type":"related"},{"name":"cardiomyopathy and deafness due to tRNA lysine gene mutation","type":"exact"}],"termid":"MONDO:0022648","xrefs":{"Monarch":{"xref_id":"0022648"}}}


id: MONDO:0006569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A nonspecific term used to denote any cutaneous lesion or group of lesions, or eruptions of any type on the leg. (From Stedman, 25th ed)","definition_xrefs":["MESH:D007868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"leg dermatosis","secondary_identifiers":["MEDGEN:9700","UMLS:C0023219","DOID:3142"],"termid":"MONDO:0006569","xrefs":{"Monarch":{"xref_id":"0006569"}}}


id: GO:0047377
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-(3,4-diacetoxybut-1-ynyl)-2,2'-bithiophene + H2O = 5-(3-hydroxy-4-acetoxybut-1-ynyl)-2,2'-bithiophene + acetate + H+.","definition_xrefs":["EC:3.1.1.66","RHEA:16313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0019213","GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"5-(3,4-diacetoxybut-1-ynyl)-2,2'-bithiophene deacetylase activity","secondary_identifiers":["MetaCyc:3.1.1.66-RXN","KEGG_REACTION:R04525"],"synonyms":[{"name":"3,4-diacetoxybutinylbithiophene:4-acetate esterase activity","type":"related"},{"name":"5-(3,4-diacetoxybut-1-ynyl)-2,2'-bithiophene acetylhydrolase activity","type":"related"},{"name":"diacetoxybutynylbithiophene acetate esterase activity","type":"related"}],"termid":"GO:0047377"}


id: MONDO:0024315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of the epicondyles by a parasite.","definition_xrefs":["NCIT:C34587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endophthalmitis","termid":"MONDO:0016047"},{"relation_name":"is_a","term_name":"parasitic eye infection","termid":"MONDO:0020947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"parasitic endophthalmitis","secondary_identifiers":["ICD9:360.13","SCTID:57100005","icd11.foundation:935014361","MEDGEN:4954","UMLS:C0014238"],"synonyms":[{"name":"parasitic endophthalmitis","type":"exact"}],"termid":"MONDO:0024315","xrefs":{"Monarch":{"xref_id":"0024315"}}}


id: GO:0160111
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structural network of microtubule inner proteins (MIPs) located inside the lumen of the A tubule of the axonemal microtubule doublet that helps stabilize the A tubule.","definition_xrefs":["PMID:29430673","GOC:krc","PMID:37295417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"A axonemal microtubule","termid":"GO:0097649"},{"relation_name":"part_of","term_name":"axonemal microtubule doublet inner sheath","termid":"GO:0160110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0015630"],"is_obsolete":false,"name":"axonemal A tubule inner sheath","termid":"GO:0160111"}


id: GO:0010135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ureide, allantoin and allantoate, which are the organic forms of nitrogen in nitrogen fixing and transporting plants.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureide metabolic process","synonyms":[{"name":"ureide metabolism","type":"exact"}],"termid":"GO:0010135"}


id: PBO:0000388
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.48","termid":"PBO:0000388"}


id: MONDO:0005122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bacterial infection induced by Pectobacterium carotovorum which is is a bacterium of the family Enterobacteriaceae. This bacterius is a ubiquitous plant pathogen with a wide host range (carrot, potato, tomato, leafy greens, squash and other cucurbits, onion, green peppers, African violets etc.), able to cause disease in almost any plant tissue it invades. It is a very economically important pathogen in terms of postharvest losses, and a common cause of decay in stored fruits and vegetables. Decay caused by E. carotovora is often simply referred to as \\\"bacterial soft rot\\\" (BSR) though this may also be caused by other bacteria. Most plants or plant parts can resist invasion by the bacteria, unless some type of wound is present. High humidity and temperatures around 30°C favor development of decay. Mutants can be produced which are less virulent. Virulence factors include: pectinases, cellulases, (which degrade plant cell walls), and also proteases, lipases, xylanases and nucleases (along with the normal virulence factors for pathogens – Fe acquisition, LPS integrity, multiple global regulatory systems).","definition_xrefs":["EFO:0000781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pectobacterium carotovorum infection","secondary_identifiers":["Wikipedia:Pectobacterium_carotovorum"],"synonyms":[{"name":"Pectobacterium caused disease or disorder","type":"exact"},{"name":"Pectobacterium disease or disorder","type":"exact"},{"name":"Pectobacterium infectious disease","type":"exact"}],"termid":"MONDO:0005122","xrefs":{"Monarch":{"xref_id":"0005122"}}}


id: GO:0180017
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Hydrolysis of a ubiquitin unit from a ubiquitinated protein linked via the Lys11 residue of ubiquitin.","definition_xrefs":["PMID:26412298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deubiquitinase activity","termid":"GO:0101005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008233","GO:0016787","GO:0003674","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"K11-linked deubiquitinase activity","termid":"GO:0180017"}


id: GO:1904039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of export of iron ions from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["GOC:BHF","GOC:kom","GO_REF:0000058","GOC:TermGenie","PMID:15514116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of iron ion transmembrane transport","termid":"GO:0034760"},{"relation_name":"is_a","term_name":"regulation of iron export across plasma membrane","termid":"GO:1904038"},{"relation_name":"negatively_regulates","term_name":"iron ion export across plasma membrane","termid":"GO:1903988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"negative regulation of iron export across plasma membrane","synonyms":[{"name":"down regulation of ferrous iron export","type":"narrow"},{"name":"down regulation of iron(2+) export","type":"narrow"},{"name":"down-regulation of ferrous iron export","type":"narrow"},{"name":"down-regulation of iron(2+) export","type":"narrow"},{"name":"downregulation of ferrous iron export","type":"narrow"},{"name":"downregulation of iron(2+) export","type":"narrow"},{"name":"inhibition of ferrous iron export","type":"narrow"},{"name":"inhibition of iron(2+) export","type":"narrow"},{"name":"negative regulation of ferrous iron export","type":"narrow"},{"name":"negative regulation of iron(2+) export","type":"narrow"}],"termid":"GO:1904039"}


id: PBO:0046132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4H pseudogene 2","termid":"PBO:0046132"}


id: PBO:0004997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L35","termid":"PBO:0004997"}


id: GO:0043425
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a basic Helix-Loop-Helix (bHLH) superfamily of transcription factors, important regulatory components in transcriptional networks of many developmental pathways.","definition_xrefs":["PMID:9144210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription factor binding","termid":"GO:0140297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"bHLH transcription factor binding","termid":"GO:0043425"}


id: PBO:0045239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C19 pseudogene 7","termid":"PBO:0045239"}


id: PBO:0073521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain binding protein 4","termid":"PBO:0073521"}


id: PBO:0088980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydratase involved in very long-chain fatty acid elongation Phs1","termid":"PBO:0088980"}


id: GO:0042174
data:
  {"annotated_genes":["SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sporulation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporulation resulting in formation of a cellular spore","termid":"GO:0042173"},{"relation_name":"is_a","term_name":"negative regulation of sporulation","termid":"GO:0043939"},{"relation_name":"negatively_regulates","term_name":"sporulation resulting in formation of a cellular spore","termid":"GO:0030435"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sporulation resulting in formation of a cellular spore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of sporulation","type":"exact"},{"name":"down-regulation of sporulation","type":"exact"},{"name":"downregulation of sporulation","type":"exact"},{"name":"inhibition of sporulation","type":"narrow"}],"termid":"GO:0042174","terms_by_termid":{"GO:0075297":null}}


id: PBO:0076924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Dp-1","termid":"PBO:0076924"}


id: PBO:0048900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 24","termid":"PBO:0048900"}


id: PBO:0079417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 8 class VIII pseudogene 11","termid":"PBO:0079417"}


id: FYPO:0002851
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found at the eisosome is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"protein mislocalized to eisosome","synonyms":[{"name":"ectopic protein localization to eisosome","type":"exact"},{"name":"protein mislocalised to eisosome","type":"exact"},{"name":"protein mislocalised to eisosome during vegetative growth","type":"exact"},{"name":"protein mislocalized to eisosome during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to eisosome during vegetative growth","type":"exact"}],"termid":"FYPO:0002851"}


id: MONDO:0019268
data:
  {"annotated_genes":["SJAG_04565","SJAG_16459","SJAG_02085","SJAG_01938","SJAG_04167","SJAG_01798","SJAG_01307","SJAG_03352","SJAG_02842","SJAG_01338","SJAG_04290","SJAG_00379","SJAG_05011","SJAG_01474","SJAG_02326","SJAG_00104","SJAG_00580","SJAG_01229","SJAG_02488","SJAG_02698","SJAG_04865","SJAG_02885","SJAG_03158","SJAG_01878","SJAG_01356","SJAG_03850","SJAG_03349"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86699,86700,86698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007507"},{"annotations":[84765,84764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014010"},{"annotations":[84947,84946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008695"},{"annotations":[86178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007417"},{"annotations":[85014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033014"},{"annotations":[86019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008218"},{"annotations":[85506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014131"},{"annotations":[85220,85219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009440"},{"annotations":[85350,85351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100221"},{"annotations":[85109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859355"},{"annotations":[86254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011169"},{"annotations":[84678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012251"},{"annotations":[84518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007858"},{"annotations":[86221,86219,86220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008416"},{"annotations":[86271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011405"},{"annotations":[86587,86586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008293"},{"annotations":[85635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013868"},{"annotations":[85497,85498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014713"},{"annotations":[85133,85134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007574"}]},"cv_name":"mondo","definition":"A skin disease that involves the epidermis.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00379":null,"SJAG_00580":null,"SJAG_01229":null,"SJAG_01307":null,"SJAG_01338":null,"SJAG_01356":null,"SJAG_01474":null,"SJAG_01798":null,"SJAG_01878":null,"SJAG_01938":null,"SJAG_02085":null,"SJAG_02326":null,"SJAG_02488":null,"SJAG_02698":null,"SJAG_02842":null,"SJAG_02885":null,"SJAG_03158":null,"SJAG_03349":null,"SJAG_03352":null,"SJAG_03850":null,"SJAG_04167":null,"SJAG_04290":null,"SJAG_04565":null,"SJAG_04865":null,"SJAG_05011":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermal disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1842776","UMLS:C5681492","Orphanet:79353"],"synonyms":[{"name":"epidermal disease","type":"exact"},{"name":"rare epidermal disease","type":"exact"}],"termid":"MONDO:0019268","terms_by_termid":{"MONDO:0007417":null,"MONDO:0007507":null,"MONDO:0007574":null,"MONDO:0007858":null,"MONDO:0008218":null,"MONDO:0008293":null,"MONDO:0008416":null,"MONDO:0008695":null,"MONDO:0009440":null,"MONDO:0011169":null,"MONDO:0011405":null,"MONDO:0012251":null,"MONDO:0013868":null,"MONDO:0014010":null,"MONDO:0014131":null,"MONDO:0014713":null,"MONDO:0033014":null,"MONDO:0100221":null,"MONDO:0859355":null},"xrefs":{"Monarch":{"xref_id":"0019268"}}}


id: PBO:0045479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmocollin 1","termid":"PBO:0045479"}


id: GO:0006266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The re-formation of a broken phosphodiester bond in the DNA backbone, carried out by DNA ligase.","definition_xrefs":["ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA ligation (obsolete GO:0006266)","termid":"GO:0006266"}


id: PBO:0057603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 940","termid":"PBO:0057603"}


id: GO:0004337
data:
  {"annotated_genes":["SJAG_00580","SJAG_03352"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99098,108972],"is_not":false,"summary":null,"term":"GO:0004337"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E)-geranyl diphosphate + isopentenyl diphosphate = (2E,6E)-farnesyl diphosphate + diphosphate.","definition_xrefs":["RHEA:19361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyl diphosphate synthase activity","termid":"GO:0120531"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00580":null,"SJAG_03352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016765"],"is_obsolete":false,"name":"(2E,6E)-farnesyl diphosphate synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-191303","Reactome:R-HSA-9717830","EC:2.5.1.10","KEGG_REACTION:R02003","MetaCyc:FPPSYN-RXN","Reactome:R-HSA-8870469"],"synonyms":[{"name":"FPP synthetase activity","type":"related"},{"name":"farnesyl diphosphate synthase activity","type":"exact"},{"name":"farnesyl diphosphate synthetase activity","type":"related"},{"name":"farnesyl pyrophosphate synthetase activity","type":"exact"},{"name":"farnesyl-diphosphate synthase activity","type":"exact"},{"name":"farnesylpyrophosphate synthetase activity","type":"related"},{"name":"geranyl transferase I","type":"related"},{"name":"geranyl-diphosphate:isopentenyl-diphosphate geranyltranstransferase activity","type":"related"},{"name":"geranyltransferase activity","type":"related"},{"name":"geranyltranstransferase activity","type":"exact"}],"termid":"GO:0004337","terms_by_termid":{"GO:0004337":null}}


id: GO:0039579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont inhibits or disrupts a host ubiquitin-like protein ISG15 conjugation to a substrate. ISG15 is a ubiquitin-like protein that is conjugated to lysine residues on various target proteins. For example, some viruses escape the antiviral activity of ISG15 by using different mechanisms; the influenza B virus NS1 protein blocks the covalent linkage of ISG15 to its target proteins by directly interacting with ISG15, while the papain-like protease from the coronavirus cleaves ISG15 derivatives.","definition_xrefs":["PMID:18604270","PMID:32845033","PMID:11157743","PMID:18078692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host innate immune response","termid":"GO:0052170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host ISG15-protein conjugation","synonyms":[{"name":"suppression by virus of host ISG15 activity","type":"related"},{"name":"suppression by virus of host ISG15-protein conjugation","type":"narrow"}],"termid":"GO:0039579"}


id: MONDO:0800356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"short rib dysplasia","termid":"MONDO:0019691"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short-rib thoracic dysplasia 7/20 with polydactyly, digenic","secondary_identifiers":["UMLS:C4747658","MEDGEN:1662086"],"synonyms":[{"name":"SRTD7/20","type":"exact"}],"termid":"MONDO:0800356","xrefs":{"Monarch":{"xref_id":"0800356"}}}


id: PBO:0088108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uroporphyrinogen III synthase; catalyzes the conversion of hydroxymethylbilane to uroporphyrinogen III, the fourth step in heme biosynthesis; deficiency in the human homolog can result in the disease congenital erythropoietic porphyria","termid":"PBO:0088108"}


id: PR:O74888
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bxi1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bax inhibitor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.04","synonyms":[{"name":"BH3 domain-containing protein bxi1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-bxi1","type":"exact"}],"termid":"PR:O74888"}


id: PBO:0058329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4703","termid":"PBO:0058329"}


id: PBO:0070508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 7","termid":"PBO:0070508"}


id: PBO:0091898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane hexose:proton symporter, unknown specificity Ght8","termid":"PBO:0091898"}


id: PR:O13997
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein IMPACT that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR16301:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein IMPACT homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.02","secondary_identifiers":["UniProtKB:O13997"],"synonyms":[{"name":"SPAC27E2.02","type":"related"},{"name":"Spom972h-IMPACT","type":"exact"}],"termid":"PR:O13997"}


id: GO:0047298
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-amino-2-methylpropanoate + 2-oxoglutarate = 2-methyl-3-oxopropanoate + L-glutamate.","definition_xrefs":["EC:2.6.1.22","RHEA:13993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016769","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"(S)-3-amino-2-methylpropionate transaminase activity","secondary_identifiers":["KEGG_REACTION:R04188","MetaCyc:2.6.1.22-RXN"],"synonyms":[{"name":"(S)-3-amino-2-methylpropanoate:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"(S)-3-amino-2-methylpropionate aminotransferase activity","type":"exact"},{"name":"L-3-aminoisobutyrate aminotransferase activity","type":"related"},{"name":"L-3-aminoisobutyrate transaminase activity","type":"related"},{"name":"L-3-aminoisobutyric aminotransferase activity","type":"related"},{"name":"L-AIBAT activity","type":"related"},{"name":"beta-aminobutyric transaminase activity","type":"related"},{"name":"beta-aminoisobutyrate-alpha-ketoglutarate transaminase activity","type":"related"}],"termid":"GO:0047298"}


id: GO:2001189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"is_a","term_name":"negative regulation of T cell activation","termid":"GO:0050868"},{"relation_name":"is_a","term_name":"regulation of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","termid":"GO:2001188"},{"relation_name":"negatively_regulates","term_name":"T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","termid":"GO:0002291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","synonyms":[{"name":"negative regulation of T lymphocyte activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"},{"name":"negative regulation of T-cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"},{"name":"negative regulation of T-lymphocyte activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"}],"termid":"GO:2001189"}


id: GO:0035409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of a phosphate group to a tyrosine residue at position 41 of the histone.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-Y41 phosphorylation (obsolete GO:0035409)","termid":"GO:0035409"}


id: PBO:0061537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP2/Sun RNA methyltransferase 2","termid":"PBO:0061537"}


id: GO:0046331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signaling between cells of equivalent developmental potential that results in these cells adopting different developmental fates. An example is the suppression by cells with a particular fate of the adoption of the same fate by surrounding cells.","definition_xrefs":["GOC:bf","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in cell fate commitment","termid":"GO:0045168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"lateral inhibition","termid":"GO:0046331"}


id: MONDO:0026183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic digestive tract malformation (obsolete MONDO:0026183)","secondary_identifiers":["Orphanet:183545"],"termid":"MONDO:0026183","xrefs":{"Monarch":{"xref_id":"0026183"}}}


id: MONDO:0007448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial dermographism is a condition also known as skin writing. When people who have dermatographia lightly scratch their skin, the scratches redden into a raised wheal similar to hives. Signs and symptoms of dermatographia include raised red lines, swelling, inflammation, hive-like welts and itching. Symptoms usually disappear within 30 minutes. The exact cause of this condition is unknown. Treatment may involve use of antihistamines if symptoms do not go away on their own.","definition_xrefs":["GARD:0009480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical urticaria","termid":"MONDO:0006599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"familial dermatographia","secondary_identifiers":["EFO:1000685","ICD10CM:L50.3","MEDGEN:342170","OMIM:125635","UMLS:C1852145","MESH:C536612","ICD9:708.3","DOID:743","SCTID:7632005"],"synonyms":[{"name":"DDU","type":"related"},{"name":"Dermatographism, familial","type":"related"},{"name":"Dermodistortive urticaria","type":"related"},{"name":"VBU","type":"related"},{"name":"dermatographia","type":"related"},{"name":"dermatographic urticaria","type":"exact"},{"name":"dermo-distortive urticaria","type":"related"},{"name":"dermographism","type":"exact"},{"name":"dermographism, familial","type":"related"},{"name":"familial dermatographism","type":"related"},{"name":"familial dermographism","type":"related"},{"name":"vibratory angioedema","type":"related"},{"name":"vibratory urticaria","type":"related"}],"termid":"MONDO:0007448","xrefs":{"Monarch":{"xref_id":"0007448"}}}


id: PBO:0064651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRF interacting protein alpha 2","termid":"PBO:0064651"}


id: _global:has_end_location
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"x 'has end location' y if and only if there exists some process z such that x 'ends with' z and z 'occurs in' y","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"has_part_that_occurs_in","termid":"_global:has_part_that_occurs_in"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_end_location","secondary_identifiers":["RO:0002232"],"termid":"_global:has_end_location"}


id: MONDO:0859339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tooth agenesis","termid":"MONDO:0005486"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tooth agenesis, selective, 10","secondary_identifiers":["UMLS:C5774277","MEDGEN:1824050","OMIM:620173"],"termid":"MONDO:0859339","xrefs":{"Monarch":{"xref_id":"0859339"}}}


id: FYPO:0001559
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methionine import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal amino acid import","termid":"FYPO:0001596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal methionine import","synonyms":[{"name":"normal L-methionine import","type":"exact"},{"name":"normal L-methionine import across plasma membrane","type":"exact"},{"name":"normal methionine import during mitotic cell cycle","type":"related"},{"name":"normal methionine import during vegetative growth","type":"exact"},{"name":"normal methionine import into cell","type":"exact"},{"name":"normal methionine uptake","type":"exact"}],"termid":"FYPO:0001559"}


id: PR:O13781
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17G6.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17G6.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.03","synonyms":[{"name":"Spom972h-SPAC17G6.03","type":"exact"}],"termid":"PR:O13781"}


id: MONDO:0001000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pneumoconiosis caused by the inhalation of mixed mineral dust particles.","definition_xrefs":["NCIT:C27559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumoconiosis","termid":"MONDO:0015926"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed mineral dust pneumoconiosis","secondary_identifiers":["DOID:10319","SCTID:233759002","UMLS:C0340184","MEDGEN:137937","ICD9:503"],"synonyms":[{"name":"mineral duct pneumoconiosis","type":"broad"},{"name":"mineral dust pneumoconiosis","type":"exact"},{"name":"mixed mineral dust pneumoconiosis","type":"exact"},{"name":"pneumoconiosis from mineral dust","type":"exact"}],"termid":"MONDO:0001000","xrefs":{"Monarch":{"xref_id":"0001000"}}}


id: MONDO:0005844
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An eyelid cyst caused by the blockage of a meibomian gland.","definition_xrefs":["NCIT:C26717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"internal hordeolum","termid":"MONDO:0004917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328"],"is_obsolete":false,"name":"chalazion","secondary_identifiers":["SCTID:1482004","icd11.foundation:777918741","MEDGEN:869","ICD10CM:H00.1","ICD9:373.2","UMLS:C0007933","DOID:9903","EFO:0007363","MESH:D017043"],"synonyms":[{"name":"Meibomian cyst","type":"related"},{"name":"chalazia","type":"related"},{"name":"chalazion","type":"exact"},{"name":"cyst, Meibomian","type":"related"},{"name":"meibomian gland lipogranuloma","type":"exact"}],"termid":"MONDO:0005844","xrefs":{"Monarch":{"xref_id":"0005844"}}}


id: GO:1900350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of methane biosynthetic process from methylamine.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amine metabolic process","termid":"GO:0033240"},{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from methylamine","termid":"GO:1900348"},{"relation_name":"is_a","term_name":"positive regulation of alkane biosynthetic process","termid":"GO:1901579"},{"relation_name":"is_a","term_name":"positive regulation of cellular respiration","termid":"GO:1901857"},{"relation_name":"positively_regulates","term_name":"methane biosynthetic process from methylamine","termid":"GO:2001128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"positive regulation of methane biosynthetic process from methylamine","synonyms":[{"name":"activation of methane biosynthetic process from methylamine","type":"narrow"},{"name":"up regulation of methane biosynthetic process from methylamine","type":"exact"},{"name":"up-regulation of methane biosynthetic process from methylamine","type":"exact"},{"name":"upregulation of methane biosynthetic process from methylamine","type":"exact"}],"termid":"GO:1900350"}


id: MONDO:1012148
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant hyperthermia, non-human animal","termid":"MONDO:1011713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant hyperthermia, pig","secondary_identifiers":["OMIA:000621-9823"],"termid":"MONDO:1012148","xrefs":{"Monarch":{"xref_id":"1012148"}}}


id: PBO:0079728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBTF like 5 (pseudogene)","termid":"PBO:0079728"}


id: PBO:0005324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane ATPase Msp1 (predicted)","termid":"PBO:0005324"}


id: MONDO:0016331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infantile systemic hyalinosis (ISH) is a very rare disorder belonging to the heterogeneous group of genetic fibromatoses and is characterized by progressive joint contractures, skin abnormalities, severe chronic pain and widespread deposition of hyaline material in many tissues such as the skin, skeletal muscle, cardiac muscle, gastrointestinal tract, lymph nodes, spleen, thyroid, and adrenal glands.","definition_xrefs":["Orphanet:2176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyaline fibromatosis syndrome","termid":"MONDO:0009229"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infantile systemic hyalinosis","secondary_identifiers":["UMLS:C5574678","OMIM:236490","icd11.foundation:2089325724","MEDGEN:1803732","GARD:6807","SCTID:238867003"],"termid":"MONDO:0016331","xrefs":{"Monarch":{"xref_id":"0016331"}}}


id: GO:0097465
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Spine emanating from the cell soma of a neuron.","definition_xrefs":["NIF_Subcellular:sao2048514053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron spine","termid":"GO:0044309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"somatic spine","termid":"GO:0097465"}


id: PBO:0017842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione transmembrane transporter Pgt1","termid":"PBO:0017842"}


id: PBO:0041070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain protein I3 pseudogene 3","termid":"PBO:0041070"}


id: GO:0070202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a protein to a specific location on a chromosome.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of protein localization","termid":"GO:0070201"},{"relation_name":"regulates","term_name":"establishment of protein localization to chromosome","termid":"GO:0070199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of establishment of protein localization to chromosome","synonyms":[{"name":"regulation of establishment of protein localisation to chromosome","type":"exact"}],"termid":"GO:0070202"}


id: GO:0006473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of an acetyl group to a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein acetylation","synonyms":[{"name":"protein amino acid acetylation","type":"exact"}],"termid":"GO:0006473"}


id: PBO:0072908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCAN domain containing 1","termid":"PBO:0072908"}


id: PBO:0061227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NODAL modulator 3","termid":"PBO:0061227"}


id: PBO:0042324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD44 divergent transcript","termid":"PBO:0042324"}


id: PBO:0041225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1orf21 divergent transcript","termid":"PBO:0041225"}


id: GO:0141118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Fe(II)-heme b-[protein] + nitric oxide + O2 = Fe(III)-heme b-[protein] + nitrate.","definition_xrefs":["PMID:20511233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a heme group of donors","termid":"GO:0016675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"nitric oxide dioxygenase activity, heme protein as donor","secondary_identifiers":["Reactome:R-HSA-5340226","RHEA:78091"],"termid":"GO:0141118"}


id: PBO:0074102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 27 member 5","termid":"PBO:0074102"}


id: PBO:0088068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease; removes ubiquitin from ubiquitinated proteins; cleaves at the C terminus of ubiquitin fusions irrespective of their size; capable of cleaving polyubiquitin chains","termid":"PBO:0088068"}


id: MONDO:0013724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any bacteremia, susceptibility in which the cause of the disease is a mutation in the CISH gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacteremia, susceptibility","termid":"MONDO:0000108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bacteremia, susceptibility to, 2","secondary_identifiers":["MEDGEN:482277","OMIM:614383","UMLS:C3280647"],"synonyms":[{"name":"BACTS2","type":"related"},{"name":"CISH bacteremia, susceptibility","type":"exact"},{"name":"bacteremia, susceptibility caused by mutation in CISH","type":"exact"},{"name":"bacteremia, susceptibility to","type":"exact"},{"name":"bacteremia, susceptibility to, 2","type":"exact"},{"name":"bacteremia, susceptibility to, type 2","type":"exact"}],"termid":"MONDO:0013724","xrefs":{"Monarch":{"xref_id":"0013724"}}}


id: PBO:0044989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box helicase 40 pseudogene 1","termid":"PBO:0044989"}


id: GO:0061262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal vesicle formation","termid":"GO:0072033"},{"relation_name":"part_of","term_name":"mesonephric renal vesicle morphogenesis","termid":"GO:0061243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric renal vesicle formation","synonyms":[{"name":"mesonephros formation","type":"exact"}],"termid":"GO:0061262"}


id: PBO:0090341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2A","termid":"PBO:0090341"}


id: PBO:0002488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic phosphate transporter (predicted)","termid":"PBO:0002488"}


id: MONDO:0012004
data:
  {"annotated_genes":["SJAG_01151"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85367],"is_not":false,"summary":null,"term":"MONDO:0012004"}]},"cv_name":"mondo","definition":"A very rare, slow-growing, clinically serious endocrine tumor that generally develops in mid-adulthood. PRTC presents as a palpable painless mass in the neck and causes severe hypercalcemia and related symptoms, non-specific gastrointestinal manifestations, as well as renal and bone complications related to primary hyperparathyroidism (nephrolithiasis, impaired renal function, osteoporosis, bone pain, and pathologic fractures, etc.). Some PRTCs are however non-functioning tumors.","definition_xrefs":["Orphanet:143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"malignant tumor of parathyroid gland","termid":"MONDO:0021311"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01151":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"parathyroid gland carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:608266","SCTID:255037004","ONCOTREE:PTHC","ICD9:194.1","DOID:1540","GARD:7329","NCIT:C4906","MEDGEN:146361","EFO:1000456","UMLS:C0687150"],"synonyms":[{"name":"PRTC","type":"related"},{"name":"adenocarcinoma of parathyroid","type":"exact"},{"name":"adenocarcinoma of parathyroid gland","type":"exact"},{"name":"adenocarcinoma of the parathyroid","type":"exact"},{"name":"adenocarcinoma of the parathyroid gland","type":"exact"},{"name":"cancer of parathyroid gland","type":"broad"},{"name":"cancer of the parathyroid gland","type":"broad"},{"name":"carcinoma of parathyroid","type":"exact"},{"name":"carcinoma of parathyroid gland","type":"exact"},{"name":"carcinoma of the parathyroid","type":"exact"},{"name":"carcinoma of the parathyroid gland","type":"exact"},{"name":"malignant neoplasm of parathyroid gland","type":"broad"},{"name":"malignant neoplasm of the parathyroid","type":"broad"},{"name":"malignant tumour of parathyroid gland","type":"broad"},{"name":"parathyroid adenocarcinoma","type":"exact"},{"name":"parathyroid cancer","type":"broad"},{"name":"parathyroid carcinoma","type":"exact"},{"name":"parathyroid gland adenocarcinoma","type":"exact"},{"name":"parathyroid gland cancer","type":"broad"},{"name":"parathyroid gland carcinoma","type":"exact"},{"name":"parathyroid gland neoplasm","type":"broad"},{"name":"parathyroid neoplasm","type":"broad"}],"termid":"MONDO:0012004","terms_by_termid":{"MONDO:0012004":null},"xrefs":{"Monarch":{"xref_id":"0012004"}}}


id: MONDO:0003973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of testicular seminoma characterized by the presence of seminoma cells arranged in tubular patterns and few lymphocytes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular seminoma","termid":"MONDO:0003669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"tubular variant testicular seminoma","secondary_identifiers":["NCIT:C40959","MEDGEN:308259","DOID:6706","UMLS:C1515294"],"synonyms":[{"name":"testicular seminoma, tubular variant","type":"exact"}],"termid":"MONDO:0003973","xrefs":{"Monarch":{"xref_id":"0003973"}}}


id: FYPO:0005463
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic microtubule polymerization, i.e. the addition of tubulin dimers to the plus end of a cytoplasmic microtubule during interphase of the mitotic cell cycle, does not continue until microtubules reach the ends of the cell.","definition_xrefs":["PMID:12894167","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"short interphase microtubules","termid":"FYPO:0006103"},{"relation_name":"is_a","term_name":"abnormal microtubule polymerization during vegetative growth","termid":"FYPO:0004614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased spatial extent of interphase microtubule polymerization","synonyms":[{"name":"decreased growth of interphase microtubules to cell end","type":"exact"},{"name":"decreased spatial extent of cytoplasmic microtubule polymerization during mitotic interphase","type":"exact"},{"name":"decreased spatial extent of interphase cytoplasmic microtubule polymerization","type":"exact"},{"name":"decreased spatial extent of interphase microtubule growth","type":"exact"},{"name":"decreased spatial extent of interphase microtubule polymerisation","type":"exact"},{"name":"decreased spatial extent of interphase microtubule polymerization","type":"related"}],"termid":"FYPO:0005463"}


id: PBO:0002361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyl transferase A subunit (predicted)","termid":"PBO:0002361"}


id: GO:0075110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont activates, maintains or increases the frequency, rate or extent of receptor-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host receptor-mediated signal transduction (obsolete GO:0075110)","synonyms":[{"name":"positive regulation by symbiont of host receptor-mediated signal transduction","type":"exact"}],"termid":"GO:0075110"}


id: PBO:0062428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 89 pseudogene","termid":"PBO:0062428"}


id: MONDO:0015220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome with a central nervous system malformation as major feature (obsolete MONDO:0015220)","secondary_identifiers":["Orphanet:108991"],"termid":"MONDO:0015220","xrefs":{"Monarch":{"xref_id":"0015220"}}}


id: GO:0008720
data:
  {"annotated_genes":["SJAG_03804"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79835],"is_not":false,"summary":null,"term":"GO:0008720"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-lactate + NAD+ = H+ + NADH + pyruvate.","definition_xrefs":["EC:1.1.1.28","RHEA:16369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate dehydrogenase activity","termid":"GO:0004457"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03804":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"D-lactate dehydrogenase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:DLACTDEHYDROGNAD-RXN","KEGG_REACTION:R00704"],"synonyms":[{"name":"D-lactic acid dehydrogenase activity","type":"related"},{"name":"D-lactic dehydrogenase activity","type":"related"}],"termid":"GO:0008720","terms_by_termid":{"GO:0008720":null}}


id: MONDO:0009905
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by intellectual deficit, short stature, obesity, genital abnormalities, and hand and/or toe contractures. It has been described in two brothers and in one isolated case. The patients also present with generalized osteoporosis and a history of frequent fractures. This syndrome is similar to Prader-Willi syndrome, but the hand contractures and osteoporosis, together with the lack of hypotonia, indicate this is a different entity.","definition_xrefs":["Orphanet:3409"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urban-Rogers-Meyer syndrome","secondary_identifiers":["GARD:5426","OMIM:264010","MESH:C538276","SCTID:716334004","MEDGEN:162919","UMLS:C0796189"],"synonyms":[{"name":"Prader-Willi habitus, osteopenia, and camptodactyly","type":"related"},{"name":"Prader-Willi habitus-osteopenia-camptodactyly syndrome","type":"exact"},{"name":"intellectual disability-short stature-hand contractures-genital anomalies syndrome","type":"exact"},{"name":"urban-Rogers-Meyer syndrome","type":"exact"}],"termid":"MONDO:0009905","xrefs":{"Monarch":{"xref_id":"0009905"}}}


id: PBO:0026915
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_double-stranded_DNA_binding","termid":"PBO:0026915"}


id: PBO:0070565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 31","termid":"PBO:0070565"}


id: GO:0061669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Neurotransmitter secretion that occurs in the absence of the action of a secretagogue or a presynaptic action potential.","definition_xrefs":["GOC:pad","GOC:PARL","GOC:dph","PMID:21334193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"part_of","term_name":"spontaneous synaptic transmission","termid":"GO:0098814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"spontaneous neurotransmitter secretion","synonyms":[{"name":"stimulus-independent neurotransmitter secretion","type":"exact"}],"termid":"GO:0061669"}


id: FYPO:0004924
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere tethering at the nuclear periphery is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"normal telomere localization","termid":"FYPO:0004973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"normal telomere tethering at nuclear periphery","synonyms":[{"name":"normal mitotic telomere tethering at nuclear periphery during vegetative growth","type":"exact"},{"name":"normal telomere anchoring at nuclear periphery","type":"exact"},{"name":"normal telomere tethering at nuclear periphery during mitotic cell cycle","type":"related"},{"name":"normal telomere tethering at nuclear periphery during vegetative growth","type":"exact"},{"name":"normal telomere tethering to NE during vegetative growth","type":"exact"}],"termid":"FYPO:0004924"}


id: PBO:0075646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRY4 antisense RNA 1","termid":"PBO:0075646"}


id: MONDO:0011235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"pelvic dysplasia-arthrogryposis of lower limbs syndrome","secondary_identifiers":["MEDGEN:400731","GARD:4269","UMLS:C1865294","Orphanet:2840","OMIM:602484"],"synonyms":[{"name":"Ray-Peterson-Scott syndrome","type":"exact"},{"name":"pelvic dysplasia arthrogryposis of lower limbs","type":"related"},{"name":"pelvic hypoplasia with LOWER-limb arthrogryposis","type":"related"},{"name":"pelvic hypoplasia with arthrogryposis of lower limbs","type":"related"},{"name":"pelvic hypoplasia with lower limb arthrogryposis","type":"related"}],"termid":"MONDO:0011235","xrefs":{"Monarch":{"xref_id":"0011235"}}}


id: PBO:0068292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho family GTPase 1","termid":"PBO:0068292"}


id: GO:0050359
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + tropomyosin = ADP + O-phosphotropomyosin.","definition_xrefs":["MetaCyc:TROPOMYOSIN-KINASE-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete tropomyosin kinase activity (obsolete GO:0050359)","synonyms":[{"name":"ATP:tropomyosin O-phosphotransferase activity","type":"related"},{"name":"STK","type":"related"},{"name":"tropomyosin kinase (phosphorylating) activity","type":"related"}],"termid":"GO:0050359"}


id: PBO:0029238
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitosis_with_unreplicated_DNA","termid":"PBO:0029238"}


id: PBO:0113319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the nonsense-mediated mRNA decay (NMD) pathway; acts as a scaffold protein bridging Nam7p and Upf3p; involved in telomere maintenance; contains an acidic domain and three middle domains of eukaryotic initiation factor 4G (mIF4G) with aspartic 59 of mIF4G-1 important for NMD activity and translation termination accuracy","termid":"PBO:0113319"}


id: PBO:0059592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 4","termid":"PBO:0059592"}


id: PBO:0069809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1095, pseudogene","termid":"PBO:0069809"}


id: MONDO:0005157
data:
  {"annotated_genes":["SJAG_00980","SJAG_02527","SJAG_02460"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85669,85668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011508"},{"annotations":[86814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009693"}]},"cv_name":"mondo","definition":"A neoplasm composed of a lymphocytic cell population which is usually malignant (clonal) by molecular genetic and/or immunophenotypic analysis. Lymphocytic neoplasms include Hodgkin and non-Hodgkin lymphomas, acute and chronic lymphocytic leukemias, and plasma cell neoplasms.","definition_xrefs":["NCIT:C7065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic and lymphoid cell neoplasm","termid":"MONDO:0044881"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00980":null,"SJAG_02460":null,"SJAG_02527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"lymphoid neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ONCOTREE:LYMPH","UMLS:C0598798","ICD9:200.7","EFO:0001642","MEDGEN:108626"],"synonyms":[{"name":"lymphocytic and plasma cell neoplasm","type":"exact"},{"name":"lymphocytic and plasma cell tumor","type":"exact"},{"name":"lymphocytic and plasma cell tumour","type":"exact"},{"name":"lymphocytic and plasmacytic neoplasm","type":"exact"},{"name":"lymphocytic neoplasm","type":"exact"},{"name":"lymphocytic tumor","type":"exact"},{"name":"lymphocytic tumour","type":"exact"},{"name":"lymphoid and plasma cell tumor","type":"exact"},{"name":"lymphoid and plasma cell tumour","type":"exact"},{"name":"lymphoid and plasmacytic neoplasm","type":"exact"},{"name":"lymphoid and plasmacytic tumor","type":"exact"},{"name":"lymphoid and plasmacytic tumour","type":"exact"},{"name":"lymphoid neoplasm","type":"exact"},{"name":"lymphoid tumor","type":"exact"},{"name":"lymphoid tumour","type":"exact"}],"termid":"MONDO:0005157","terms_by_termid":{"MONDO:0009693":null,"MONDO:0011508":null},"xrefs":{"Monarch":{"xref_id":"0005157"}}}


id: GO:0090706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which information that determines the correct position at which plant organ primordia are formed is generated and perceived resulting in correct positioning of the new plant organ.","definition_xrefs":["GOC:tb","PMID:9611175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"plant organ morphogenesis","termid":"GO:1905392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of plant organ position","termid":"GO:0090706"}


id: PBO:0049938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERV-H LTR-associating 2","termid":"PBO:0049938"}


id: GO:0019662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fermentation that does not include the anaerobic conversion of glucose to pyruvate via the glycolytic pathway.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fermentation","termid":"GO:0006113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"non-glycolytic fermentation","termid":"GO:0019662"}


id: GO:2000238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tRNA export from nucleus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA export from nucleus","termid":"GO:0046831"},{"relation_name":"is_a","term_name":"regulation of ribonucleoprotein complex localization","termid":"GO:2000197"},{"relation_name":"regulates","term_name":"tRNA export from nucleus","termid":"GO:0006409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0006913","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of tRNA export from nucleus","synonyms":[{"name":"regulation of tRNA export from cell nucleus","type":"exact"},{"name":"regulation of tRNA export out of nucleus","type":"exact"},{"name":"regulation of tRNA transport from nucleus to cytoplasm","type":"exact"},{"name":"regulation of tRNA-nucleus export","type":"exact"}],"termid":"GO:2000238"}


id: GO:1990608
data:
  {"annotated_genes":["SJAG_03200","SJAG_04558","SJAG_05196","SJAG_01460","SJAG_02332","SJAG_01422"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89609,102961],"is_not":false,"summary":null,"term":"GO:1990608"},{"annotations":[110925,89608,102960,102320,112336,100098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140480"}]},"cv_name":"biological_process","definition":"A process in which a mitotic spindle pole body is transported to, or maintained in, a specific cellular location.","definition_xrefs":["PMID:24963130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body localization","termid":"GO:0070631"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01422":null,"SJAG_01460":null,"SJAG_02332":null,"SJAG_03200":null,"SJAG_04558":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"mitotic spindle pole body localization","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0071789","GO:0070632"],"synonyms":[{"name":"establishment and maintenance of spindle pole body localization","type":"exact"},{"name":"establishment of spindle pole body localisation","type":"narrow"},{"name":"establishment of spindle pole body localization","type":"narrow"},{"name":"mitotic spindle pole body localization to nuclear envelope","type":"narrow"},{"name":"spindle pole body docking","type":"narrow"},{"name":"spindle pole body localisation in nuclear envelope","type":"narrow"},{"name":"spindle pole body localization in nuclear envelope","type":"narrow"},{"name":"spindle pole body localization to nuclear envelope","type":"narrow"},{"name":"spindle pole body positioning","type":"narrow"}],"termid":"GO:1990608","terms_by_termid":{"GO:0140480":null,"GO:1990608":null}}


id: PBO:0027244
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_polyadenylated_5.8S_rRNA_level","termid":"PBO:0027244"}


id: MONDO:0001798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arthropathy","termid":"MONDO:0006816"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypermobility syndrome","secondary_identifiers":["MEDGEN:508885","DOID:13781","ICD10CM:M35.7","SCTID:85551004","ICD9:728.5","UMLS:C0152093"],"synonyms":[{"name":"benign joint hypermobility","type":"exact"}],"termid":"MONDO:0001798","xrefs":{"Monarch":{"xref_id":"0001798"}}}


id: MONDO:0004595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute pulmonary heart disease (obsolete MONDO:0004595)","termid":"MONDO:0004595","xrefs":{"Monarch":{"xref_id":"0004595"}}}


id: GO:0140571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Oxidation of Fe(3+) to Fe(2+) on the outer side of a membrane coupled to the reduction of L-ascorbate to monodehydro-L-ascorbate radical on the inner side of a membrane. Electrons get transferred across the membrane during the reaction.","definition_xrefs":["PMID:24449903","PMID:16911521","RHEA:30403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreduction-driven active transmembrane transporter activity","termid":"GO:0015453"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on metal ions","termid":"GO:0016722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0016491","GO:0022857","GO:0003824","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"transmembrane ascorbate ferrireductase activity","secondary_identifiers":["EC:7.2.1.3","MetaCyc:RXN-15598"],"synonyms":[{"name":"L-ascorbate-cytochrome-b5 reductase activity","type":"exact"},{"name":"L-ascorbate:ferricytochrome-b5 oxidoreductase activity","type":"exact"},{"name":"ascorbate-cytochrome b5 reductase activity","type":"exact"}],"termid":"GO:0140571"}


id: MONDO:0700241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinopathy caused by bi-allelic variants in the IMPG2 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"IMPG2-related recessive retinopathy","synonyms":[{"name":"IMPG2-related recessive retinopathy","type":"exact"}],"termid":"MONDO:0700241","xrefs":{"Monarch":{"xref_id":"0700241"}}}


id: PBO:0082047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2'-O-ribose methyltransferase; catalyzes the ribose methylation of the guanosine nucleotide at position 18 of tRNAs","termid":"PBO:0082047"}


id: GO:0000142
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A contractile ring, i.e. a cytoskeletal structure composed of actin filaments and myosin, that forms beneath the plasma membrane at the mother-bud neck in mitotic cells that divide by budding in preparation for completing cytokinesis. An example of this structure is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:krc","PMID:16009555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic actomyosin contractile ring","termid":"GO:0110085"},{"relation_name":"part_of","term_name":"cellular bud neck","termid":"GO:0005935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0070938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0015629","GO:0070938","GO:0005737","GO:0005938"],"is_obsolete":false,"name":"cellular bud neck contractile ring","synonyms":[{"name":"neck ring","type":"exact"}],"termid":"GO:0000142"}


id: PBO:0030344
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_binding_during_cellular_response_to_hypoxia","termid":"PBO:0030344"}


id: GO:0060944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of neural crest cells to a cardiac fibroblast fate and their capacity to differentiate into cardiac fibroblast cells. A cardiac fibroblast is a connective tissue cell in the heart which secretes an extracellular matrix rich in collagen and other macromolecules.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac fibroblast cell fate commitment","termid":"GO:0060937"},{"relation_name":"part_of","term_name":"neural crest-derived cardiac fibroblast cell differentiation","termid":"GO:0060942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest-derived cardiac fibroblast cell fate commitment","termid":"GO:0060944"}


id: GO:0047393
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerol 1,2-cyclic phosphate + H2O = glycerol 1-phosphate + H+.","definition_xrefs":["RHEA:16493","EC:3.1.4.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"glycerol-1,2-cyclic-phosphate 2-phosphodiesterase activity","secondary_identifiers":["KEGG_REACTION:R02648","MetaCyc:3.1.4.42-RXN"],"synonyms":[{"name":"rac-glycerol 1:2-cyclic phosphate 2-phosphodiesterase activity","type":"related"},{"name":"rac-glycerol-1,2-cyclic-phosphate 2-glycerophosphohydrolase activity","type":"related"}],"termid":"GO:0047393"}


id: PBO:0058769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6893","termid":"PBO:0058769"}


id: PBO:0082187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alcohol dehydrogenase; fermentative isozyme active as homo- or heterotetramers; required for the reduction of acetaldehyde to ethanol, the last step in the glycolytic pathway; ADH1 has a paralog, ADH5, that arose from the whole genome duplication","termid":"PBO:0082187"}


id: GO:0090012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of any TGF-beta receptor signaling pathway that contributes to the formation of the primitive streak.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transforming growth factor beta receptor signaling pathway involved in primitive streak formation (obsolete GO:0090012)","synonyms":[{"name":"negative regulation of transforming growth factor beta receptor signalling pathway involved in primitive streak formation","type":"exact"}],"termid":"GO:0090012"}


id: PBO:0081135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP28 divergent transcript","termid":"PBO:0081135"}


id: PBO:0074706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 72","termid":"PBO:0074706"}


id: PBO:0062021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily M member 2","termid":"PBO:0062021"}


id: PBO:0042013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 70","termid":"PBO:0042013"}


id: GO:2000868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of estrone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid hormone secretion","termid":"GO:2000832"},{"relation_name":"is_a","term_name":"regulation of estrone secretion","termid":"GO:2000867"},{"relation_name":"negatively_regulates","term_name":"estrone secretion","termid":"GO:0035943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"negative regulation of estrone secretion","synonyms":[{"name":"negative regulation of 3-hydroxy-1,3,5(10)-estratrien-17-one secretion","type":"exact"},{"name":"negative regulation of folliculin secretion","type":"exact"}],"termid":"GO:2000868"}


id: PBO:0013773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy protein Atg101","termid":"PBO:0013773"}


id: GO:0072014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the proximal tubule over time, from its formation to the mature structure. In mammals, the proximal tubule is a nephron tubule that connects Bowman's capsule to the descending thin limb of the loop of Henle. It has a brush border epithelial morphology.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal tubule development","termid":"GO:0072014"}


id: GO:1905759
data:
  {"annotated_genes":["SJAG_02695","SJAG_02045","SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96463,100925],"is_not":false,"summary":null,"term":"GO:1905759"},{"annotations":[90867],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905760"}]},"cv_name":"cellular_component","definition":"Any microtubule that is part of a post-anaphase microtubule array.","definition_xrefs":["GOC:TermGenie","GO_REF:0000064","PMID:11007487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule","termid":"GO:0005874"},{"relation_name":"part_of","term_name":"post-anaphase microtubule array","termid":"GO:1990295"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02045":null,"SJAG_02695":null,"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"post-anaphase array microtubule","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule of PAA","type":"exact"},{"name":"microtubule of post-anaphase array","type":"exact"},{"name":"microtubule of post-anaphase microtubule array","type":"exact"},{"name":"microtubuli of PAA","type":"exact"},{"name":"microtubuli of post-anaphase array","type":"exact"},{"name":"microtubuli of post-anaphase microtubule array","type":"exact"},{"name":"microtubulus of PAA","type":"exact"},{"name":"microtubulus of post-anaphase array","type":"exact"},{"name":"microtubulus of post-anaphase microtubule array","type":"exact"},{"name":"neurotubule of PAA","type":"narrow"},{"name":"neurotubule of post-anaphase array","type":"narrow"},{"name":"neurotubule of post-anaphase microtubule array","type":"narrow"}],"termid":"GO:1905759","terms_by_termid":{"GO:1905759":null,"GO:1905760":null}}


id: PBO:0029920
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_squalene_level","termid":"PBO:0029920"}


id: PBO:0086585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; encoded opposite a Ty1 LTR","termid":"PBO:0086585"}


id: PBO:0004766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT II complex subunit Vps36","termid":"PBO:0004766"}


id: PBO:0038473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 11, pseudogene","termid":"PBO:0038473"}


id: PBO:0083724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential 107kDa subunit of the exocyst complex; the exocyst mediates polarized targeting and tethering of post-Golgi secretory vesicles to active sites of exocytosis at the plasma membrane prior to SNARE-mediated fusion; involved in assembly of the exocyst complex; required with Sec3p for ER inheritance where it promotes anchoring of the cortical ER at the bud tip","termid":"PBO:0083724"}


id: PBO:0053140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A like 6B","termid":"PBO:0053140"}


id: PBO:0049886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 5","termid":"PBO:0049886"}


id: PBO:0056006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5","termid":"PBO:0056006"}


id: PR:Q9UTD7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RRP15-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA-processing protein 15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.02c","secondary_identifiers":["UniProtKB:Q9UTD7"],"synonyms":[{"name":"SPAC227.02c","type":"related"},{"name":"Spom972h-RRP15","type":"exact"}],"termid":"PR:Q9UTD7"}


id: MONDO:0013236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial pancreatic carcinoma in which the cause of the disease is a mutation in the PALB2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial pancreatic carcinoma","termid":"MONDO:0015278"},{"relation_name":"is_a","term_name":"PALB2-related cancer predisposition","termid":"MONDO:0700272"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic cancer, susceptibility to, 3","secondary_identifiers":["OMIM:613348","UMLS:C3150547","MEDGEN:461897"],"synonyms":[{"name":"PALB2 familial pancreatic carcinoma","type":"exact"},{"name":"Pnca3","type":"related"},{"name":"familial pancreatic carcinoma caused by mutation in PALB2","type":"exact"},{"name":"pancreatic cancer, susceptibility to, 3","type":"exact"},{"name":"pancreatic cancer, susceptibility to, type 3","type":"exact"},{"name":"susceptibility to pancreatic cancer 3","type":"related"}],"termid":"MONDO:0013236","xrefs":{"Monarch":{"xref_id":"0013236"}}}


id: PBO:0080136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"valyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0080136"}


id: GO:0052431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of the T-cell mediated immune response of a symbiont organism, where the two organisms are in a symbiotic interaction. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont T-cell mediated immune response (obsolete GO:0052431)","synonyms":[{"name":"modulation by organism of symbiont T-cell mediated immune response","type":"exact"}],"termid":"GO:0052431"}


id: PBO:0061241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP56 ribonucleoprotein pseudogene 2","termid":"PBO:0061241"}


id: FYPO:0006816
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 in centromere inner repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:30652128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0003223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal histone H3-K9 acetylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"normal histone H3-K9 acetylation at centromere imr during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 acetylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 acetylation at centromere inner repeat region during vegetative growth","type":"exact"},{"name":"normal histone H3K9 acetylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0006816"}


id: PBO:0048604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit 8 homolog","termid":"PBO:0048604"}


id: MONDO:0100070
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that affects the neuroendocrine gland, any of the organized aggregations of cells that function as secretory or excretory organs and that release hormones in response to neural stimuli.","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroendocrine disorder","secondary_identifiers":["MEDGEN:1843486","UMLS:C0541403"],"synonyms":[{"name":"neuroendocrine system disease","type":"exact"}],"termid":"MONDO:0100070","xrefs":{"Monarch":{"xref_id":"0100070"}}}


id: FYPO:0006269
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 in regions containing protein-coding genes occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at protein coding gene during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 dimethylation at protein coding gene during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at protein coding gene during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K9 dimethylation at protein-coding gene during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me2 at protein coding gene during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 dimethylation at protein coding gene during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at protein coding gene during vegetative growth","type":"exact"}],"termid":"FYPO:0006269"}


id: GO:0090362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the appearance of any platelet-derived growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of platelet-derived growth factor production","termid":"GO:0090361"},{"relation_name":"positively_regulates","term_name":"platelet-derived growth factor production","termid":"GO:0090360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of platelet-derived growth factor production","termid":"GO:0090362"}


id: PBO:0074526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA C2","termid":"PBO:0074526"}


id: PBO:0018186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Lto1 (predicted)","termid":"PBO:0018186"}


id: PBO:0082620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of a complex containing the Tor2p kinase and other proteins; complex may have a role in regulation of cell growth","termid":"PBO:0082620"}


id: PBO:0079922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urate (hydroxyiso-) hydrolase, pseudogene","termid":"PBO:0079922"}


id: PBO:0001222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab subfamily","termid":"PBO:0001222"}


id: MONDO:0015225
data:
  {"annotated_genes":["SJAG_02096","SJAG_01665","SJAG_01863","SJAG_02431","SJAG_01065","SJAG_00773","SJAG_00875","SJAG_03703","SJAG_03847","SJAG_04697","SJAG_03379","SJAG_00853","SJAG_05194","SJAG_03106"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032903"},{"annotations":[86014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030281"},{"annotations":[85185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030847"},{"annotations":[86614,86615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032751"},{"annotations":[86021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008822"},{"annotations":[85307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014248"},{"annotations":[86621,86622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008338"},{"annotations":[86647,86646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020746"},{"annotations":[85616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100104"},{"annotations":[86660,86661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008675"},{"annotations":[86505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010532"},{"annotations":[85465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012750"},{"annotations":[85670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009670"},{"annotations":[84972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012656"},{"annotations":[84913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014552"},{"annotations":[85297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014806"},{"annotations":[85296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014807"},{"annotations":[85165,85166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008016"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00773":null,"SJAG_00853":null,"SJAG_00875":null,"SJAG_01065":null,"SJAG_01665":null,"SJAG_01863":null,"SJAG_02096":null,"SJAG_02431":null,"SJAG_03106":null,"SJAG_03379":null,"SJAG_03703":null,"SJAG_03847":null,"SJAG_04697":null,"SJAG_05194":null},"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:19870","Orphanet:109007","icd11.foundation:1692487835","MESH:D001176"],"synonyms":[{"name":"arthrogryposis syndrome","type":"exact"}],"termid":"MONDO:0015225","terms_by_termid":{"MONDO:0008016":null,"MONDO:0008338":null,"MONDO:0008675":null,"MONDO:0008822":null,"MONDO:0009670":null,"MONDO:0010532":null,"MONDO:0012656":null,"MONDO:0012750":null,"MONDO:0014248":null,"MONDO:0014552":null,"MONDO:0014806":null,"MONDO:0014807":null,"MONDO:0020746":null,"MONDO:0030281":null,"MONDO:0030847":null,"MONDO:0032751":null,"MONDO:0032903":null,"MONDO:0100104":null},"xrefs":{"Monarch":{"xref_id":"0015225"}}}


id: PBO:0028184
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_copper","termid":"PBO:0028184"}


id: PBO:0090035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp3","termid":"PBO:0090035"}


id: GO:0044319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a cell along or through a wound gap that contributes to the reestablishment of a continuous surface.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"epiboly involved in wound healing","termid":"GO:0090505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wound healing, spreading of cells","synonyms":[{"name":"cell migration involved in wound healing epiboly","type":"exact"}],"termid":"GO:0044319"}


id: PBO:0012315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal family membrane transporter (predicted)","termid":"PBO:0012315"}


id: PBO:0064153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKP4 antisense RNA 1","termid":"PBO:0064153"}


id: PBO:0038636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA thioesterase 1","termid":"PBO:0038636"}


id: GO:0051208
data:
  {"annotated_genes":["SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108155],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"The process of binding or confining calcium ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of location in cell","termid":"GO:0051651"},{"relation_name":"part_of","term_name":"intracellular calcium ion homeostasis","termid":"GO:0006874"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0098771","GO:0008150"],"is_obsolete":false,"name":"sequestering of calcium ion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"calcium ion (Ca2+) retention","type":"exact"},{"name":"calcium ion (Ca2+) sequestering","type":"exact"},{"name":"calcium ion (Ca2+) sequestration","type":"exact"},{"name":"calcium ion (Ca2+) storage","type":"exact"},{"name":"calcium ion storage activity","type":"related"},{"name":"negative regulation of calcium ion (Ca2+) transport","type":"related"},{"name":"retention of calcium ion (Ca2+)","type":"exact"},{"name":"sequestering of calcium ion (Ca2+)","type":"exact"},{"name":"sequestration of calcium ion (Ca2+)","type":"exact"},{"name":"storage of calcium ion (Ca2+)","type":"exact"}],"termid":"GO:0051208","terms_by_termid":{"GO:0061454":null}}


id: PBO:0062534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily A member 3 pseudogene","termid":"PBO:0062534"}


id: PBO:0083549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps uncharacterized ORF YER067W","termid":"PBO:0083549"}


id: PR:P87057
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nhp6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-histone chromosomal protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.09c","synonyms":[{"name":"Spom972h-nhp6","type":"exact"}],"termid":"PR:P87057"}


id: MONDO:0009367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"McKusick-Kaufman syndrome is a very rare, genetic developmental disorder presenting in the neonatal period characterized by genitourinary malformations, polydactyly, and more rarely, congenital heart disease or gastrointestinal malformations.","definition_xrefs":["Orphanet:2473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"MKKS-related ciliopathy","termid":"MONDO:1040050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"McKusick-Kaufman syndrome","secondary_identifiers":["UMLS:C0948368","DOID:0111255","ICD9:758.89","MedDRA:10052312","SCTID:702407009","MEDGEN:184924","MESH:C538159","OMIM:236700","GARD:3427"],"synonyms":[{"name":"HMCS","type":"related"},{"name":"Kaufman McKusick syndrome","type":"related"},{"name":"Kaufman-Mckusick syndrome","type":"exact"},{"name":"MCKUSICK-Kaufman syndrome","type":"related"},{"name":"MKKS","type":"related"},{"name":"McKusick Kaufman syndrome","type":"related"},{"name":"McKusick-Kaufman syndrome","type":"exact"},{"name":"hydrometrocolpos syndrome","type":"related"},{"name":"hydrometrocolpos, postaxial polydactyly, and congenital heart malformation","type":"related"},{"name":"hydrometrocolpos-postaxial polydactyly syndrome","type":"exact"}],"termid":"MONDO:0009367","xrefs":{"Monarch":{"xref_id":"0009367"}}}


id: FYPO:0002499
data:
  {"alleles_by_uniquename":{"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001038"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of protein modification is increased. All modifications may be affected, or only modifications of a certain type, or on specific proteins, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification","termid":"FYPO:0002494"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01787":null,"SJAG_04551":null},"genotype_count":1,"genotypes_by_uniquename":{"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"increased protein modification","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_01787"],"single_locus_genotype_uniquenames":["pck1delta"],"synonyms":[{"name":"increased protein/peptide modification","type":"exact"},{"name":"protein/peptide modification: increased","type":"related"}],"termid":"FYPO:0002499","terms_by_termid":{"FYPO:0001038":null}}


id: PBO:0004690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal export complex protein Arx1, peptidase family (predicted)","termid":"PBO:0004690"}


id: GO:0015106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of bicarbonate from one side of a membrane to the other. Bicarbonate is the hydrogencarbonate ion, HCO3-.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"bicarbonate transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-2752067"],"synonyms":[{"name":"hydrogencarbonate transmembrane transporter activity","type":"exact"}],"termid":"GO:0015106"}


id: PBO:0082762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the small subunit processome; involved in 40S ribosomal subunit biogenesis; interacts with snR30 and is required for dissociation of snR30 from large pre-ribosomal particles; has homology to PINc domain protein Fcf1p, although the PINc domain of Utp23p is not required for function; essential protein","termid":"PBO:0082762"}


id: GO:0034382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a chylomicron remnant is removed from the blood via receptor-mediated endocytosis into liver cells and its constituent parts degraded.","definition_xrefs":["GOC:pde","GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride-rich lipoprotein particle clearance","termid":"GO:0071830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chylomicron remnant clearance","secondary_identifiers":["Reactome:R-HSA-8964026"],"termid":"GO:0034382"}


id: GO:0102398
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + dTDP-3-amino-4-dehydro-2,3,6-trideoxy-alpha-D-glucose = S-adenosyl-L-homocysteine + dTDP-3-N-methylamino-4-oxo-2,3,6-trideoxy-alpha-D-glucose + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dTDP-3-amino-4-oxo-2,3,6-trideoxy-alpha-D-glucose N-methyltransferase activity (obsolete GO:0102398)","termid":"GO:0102398"}


id: GO:0044227
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic, membrane-bounded compartment found within Methanotrophic bacteria that contains enzymes and electron transfer proteins for methane catabolism. This structure is analogous to the thylakoid of Cyanobacteria and the anammoxosome of anaerobic ammonium oxidation organisms.","definition_xrefs":["GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"methane-oxidizing organelle","synonyms":[{"name":"methane-oxidizing compartment","type":"exact"},{"name":"methanotroph intracytoplasmic membrane-bound compartment","type":"exact"}],"termid":"GO:0044227"}


id: PBO:0055161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2580","termid":"PBO:0055161"}


id: GO:1900122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a protein or other molecule binding to a receptor.","definition_xrefs":["GOC:TermGenie","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein binding","termid":"GO:0032092"},{"relation_name":"is_a","term_name":"regulation of receptor binding","termid":"GO:1900120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of receptor binding","synonyms":[{"name":"activation of receptor binding","type":"narrow"},{"name":"up regulation of receptor binding","type":"exact"},{"name":"upregulation of receptor binding","type":"exact"}],"termid":"GO:1900122"}


id: GO:1903341
data:
  {"annotated_genes":["SJAG_00100","SJAG_03048","SJAG_03720"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101880,107844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905263"},{"annotations":[115732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062209"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of meiotic DNA double-strand break formation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:25103240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"meiotic DNA double-strand break formation","termid":"GO:0042138"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_03048":null,"SJAG_03720":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0006259"],"is_obsolete":false,"name":"regulation of meiotic DNA double-strand break formation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903341","terms_by_termid":{"GO:0062209":null,"GO:1905263":null}}


id: PBO:0064061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 95","termid":"PBO:0064061"}


id: PBO:0058354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4727","termid":"PBO:0058354"}


id: GO:1901868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ecgonine methyl ester.","definition_xrefs":["GOC:TermGenie","PMID:22665766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid catabolic process","termid":"GO:0009822"},{"relation_name":"is_a","term_name":"ecgonine methyl ester metabolic process","termid":"GO:1901867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ecgonine methyl ester catabolic process","synonyms":[{"name":"ecgonine methyl ester breakdown","type":"exact"},{"name":"ecgonine methyl ester catabolism","type":"exact"},{"name":"ecgonine methyl ester degradation","type":"exact"}],"termid":"GO:1901868"}


id: MONDO:0009856
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessively inherited syndromic developmental defect of the eye characterized by a variable phenotype including Peters anomaly and other anterior chamber eye anomalies, short limbs, limb abnormalities (i.e. rhizomelia and brachydactyly), characteristic facial features (upper lip with cupid bow, short palpebral fissures), cleft lip/palate, and mild to severe developmental delay/intellectual disability. Other associated abnormalities reported in some patients include congenital heart defects (i.e. hypoplastic left heart, absence of right pulmonary vein, bicuspid pulmonary valve), genitourinary anomalies (hydronephrosis, renal hypoplasia, renal and ureteral duplication, multicystic dysplastic kidneys, glomerulocystic kidneys) and congenital hypothyroidism.","definition_xrefs":["Orphanet:709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"disorder of fucoglycosan synthesis","termid":"MONDO:0017747"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005267","MONDO:0024322","MONDO:0005328"],"is_obsolete":false,"name":"Peters plus syndrome","secondary_identifiers":["OMIM:261540","ICD9:743.44","DOID:0070312","NCIT:C123436","GARD:8422","DOID:0080201","SCTID:449817000","UMLS:C0796012","MESH:C537617","MEDGEN:163204"],"synonyms":[{"name":"Krause-Kivlin syndrome","type":"exact"},{"name":"Krause-van Schooneveld-Kivlin syndrome","type":"exact"},{"name":"Peters anomaly with short limb dwarfism","type":"exact"},{"name":"Peters anomaly with short-limb dwarfism","type":"related"},{"name":"Peters anomaly-short limb dwarfism syndrome","type":"exact"},{"name":"Peters-plus syndrome","type":"exact"}],"termid":"MONDO:0009856","xrefs":{"Monarch":{"xref_id":"0009856"}}}


id: PBO:0113153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone deacetylase, component of both Rpd3S and Rpd3L complexes; regulates transcription, silencing, autophagy and other processes by influencing chromatin remodeling; forms at least two different complexes which have distinct functions and members; Rpd3(L) recruitment to the subtelomeric region is regulated by interaction with the Hmt1p methyltransferase; delays late firing of single copy origins by opposing the Fkh1/2 origin activation pathway","termid":"PBO:0113153"}


id: PBO:0026948
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-entangled_telomeres","termid":"PBO:0026948"}


id: GO:0045963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving dopamine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dopamine metabolic process","termid":"GO:0042053"},{"relation_name":"is_a","term_name":"negative regulation of catecholamine metabolic process","termid":"GO:0045914"},{"relation_name":"negatively_regulates","term_name":"dopamine metabolic process","termid":"GO:0042417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dopamine metabolic process","synonyms":[{"name":"down regulation of dopamine metabolic process","type":"exact"},{"name":"down-regulation of dopamine metabolic process","type":"exact"},{"name":"downregulation of dopamine metabolic process","type":"exact"},{"name":"inhibition of dopamine metabolic process","type":"narrow"},{"name":"negative regulation of dopamine metabolism","type":"exact"}],"termid":"GO:0045963"}


id: GO:0061137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branch bud increases radially. A branch bud is the initial area of outgrowth in the formation of a new branch.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"morphogenesis of a branching structure","termid":"GO:0001763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bud dilation","termid":"GO:0061137"}


id: PBO:0079751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine-cytidine kinase 2","termid":"PBO:0079751"}


id: PBO:0056948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 15b","termid":"PBO:0056948"}


id: FYPO:0005893
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein found associated with chromatin is higher than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased protein level in chromatin","synonyms":[{"name":"increased protein level at chromatin during vegetative growth","type":"exact"},{"name":"increased protein level in chromatin during mitotic cell cycle","type":"related"},{"name":"increased protein level in chromatin during vegetative growth","type":"exact"},{"name":"protein accumulation in chromatin","type":"exact"}],"termid":"FYPO:0005893"}


id: GO:0032724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of fractalkine production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fractalkine production","termid":"GO:0032644"},{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"positively_regulates","term_name":"fractalkine production","termid":"GO:0032603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of fractalkine production","synonyms":[{"name":"activation of fractalkine production","type":"narrow"},{"name":"stimulation of fractalkine production","type":"narrow"},{"name":"up regulation of fractalkine production","type":"exact"},{"name":"up-regulation of fractalkine production","type":"exact"},{"name":"upregulation of fractalkine production","type":"exact"}],"termid":"GO:0032724"}


id: GO:1990226
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a histone methyltransferase enzyme.","definition_xrefs":["GOC:BHF","PMID:19486527","GOC:ame"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"histone methyltransferase binding","termid":"GO:1990226"}


id: GO:0080124
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pheophytin + H2O = phytol + pheophorbide.","definition_xrefs":["PMID:19304936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"pheophytinase activity","synonyms":[{"name":"pheophytin pheophorbide hydrolase activity","type":"exact"}],"termid":"GO:0080124"}


id: GO:1900970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sarcinapterin metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of pteridine metabolic process","termid":"GO:0045864"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of sarcinapterin metabolic process","termid":"GO:1900968"},{"relation_name":"positively_regulates","term_name":"sarcinapterin metabolic process","termid":"GO:1900867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of sarcinapterin metabolic process","synonyms":[{"name":"activation of sarcinapterin metabolic process","type":"narrow"},{"name":"activation of sarcinapterin metabolism","type":"exact"},{"name":"positive regulation of sarcinapterin metabolism","type":"exact"},{"name":"up regulation of sarcinapterin metabolic process","type":"exact"},{"name":"up regulation of sarcinapterin metabolism","type":"exact"},{"name":"up-regulation of sarcinapterin metabolic process","type":"exact"},{"name":"up-regulation of sarcinapterin metabolism","type":"exact"},{"name":"upregulation of sarcinapterin metabolic process","type":"exact"},{"name":"upregulation of sarcinapterin metabolism","type":"exact"}],"termid":"GO:1900970"}


id: PBO:0043560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type V alpha 2 chain","termid":"PBO:0043560"}


id: GO:0106012
data:
  {"annotated_genes":["SJAG_03602"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120047"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to the medial cortex.","definition_xrefs":["PMID:19474789","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to medial cortex","termid":"GO:0106011"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to cell cortex","termid":"GO:1904778"},{"relation_name":"positively_regulates","term_name":"protein localization to medial cortex","termid":"GO:0071574"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03602":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to medial cortex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106012","terms_by_termid":{"GO:0120047":null}}


id: MONDO:0016698
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A WHO grade II, slow growing tumor of children and young adults, usually located intraventricularly. It is the most common ependymal neoplasm. It often causes clinical symptoms by blocking cerebrospinal fluid pathways. Key histological features include perivascular pseudorosettes and ependymal rosettes. (WHO)","definition_xrefs":["NCIT:C3017"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"benign glioma","termid":"MONDO:0000638"},{"relation_name":"excluded_subClassOf","term_name":"low grade ependymoma","termid":"MONDO:0016697"},{"relation_name":"is_a","term_name":"ependymal tumor","termid":"MONDO:0003266"},{"relation_name":"is_a","term_name":"grade II glioma","termid":"MONDO:0021639"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ependymoma","secondary_identifiers":["ONCOTREE:EPM","MEDGEN:41825","MESH:D004806","GARD:6353","ICDO:9391/3","DOID:4844","UMLS:C0014474","MedDRA:10014967","NANDO:2200088","EFO:1000028","Orphanet:251636"],"synonyms":[{"name":"WHO grade II ependymal neoplasm","type":"narrow"},{"name":"WHO grade II ependymal tumor","type":"narrow"},{"name":"WHO grade II ependymal tumour","type":"narrow"},{"name":"benign ependymoma","type":"exact"},{"name":"clear cell ependymoma (histologic variant)","type":"related"},{"name":"ependymoma","type":"exact"},{"name":"ependymoma, benign","type":"narrow"},{"name":"ependymoma, familial","type":"related"},{"name":"epithelial ependymoma","type":"exact"},{"name":"papillary ependymoma (histologic variant)","type":"related"},{"name":"tanycytic ependymoma (histologic variant)","type":"related"}],"termid":"MONDO:0016698","xrefs":{"Monarch":{"xref_id":"0016698"}}}


id: PBO:0079420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta pseudogene 3","termid":"PBO:0079420"}


id: MONDO:0006202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the extrahepatic bile ducts. It is characterized by the presence of glandular and squamous malignant epithelial components.","definition_xrefs":["NCIT:C5778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosquamous bile duct carcinoma","termid":"MONDO:0003549"},{"relation_name":"is_a","term_name":"extrahepatic bile duct squamous cell carcinoma","termid":"MONDO:0006203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"extrahepatic bile duct adenosquamous carcinoma","secondary_identifiers":["EFO:1000247"],"synonyms":[{"name":"adenosquamous bile duct carcinoma","type":"narrow"},{"name":"adenosquamous carcinoma of bile duct","type":"narrow"},{"name":"adenosquamous carcinoma of the bile duct","type":"narrow"},{"name":"bile duct adenosquamous carcinoma","type":"narrow"},{"name":"extrahepatic bile duct adenosquamous carcinoma","type":"exact"}],"termid":"MONDO:0006202","xrefs":{"Monarch":{"xref_id":"0006202"}}}


id: SO:0000918
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An edit to delete a uridine.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000918 delete_U (obsolete SO:0000918)","synonyms":[{"name":"delete U","type":"exact"}],"termid":"SO:0000918"}


id: MOD:00549
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["PubMed:15283597","Unimod:196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium tagged reagent","termid":"MOD:01431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APTA d3","synonyms":[{"name":"(3-acrylamidopropyl)trimethylammonium","type":"related"},{"name":"APTA d3","type":"related"},{"name":"QAT:2H(3)","type":"related"}],"termid":"MOD:00549"}


id: MONDO:0015108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare non-syndromic intellectual disability.","gene_count":0,"genotype_count":0,"name":"obsolete rare non-syndromic intellectual disability (obsolete MONDO:0015108)","secondary_identifiers":["Orphanet:101685"],"synonyms":[{"name":"rare NSID","type":"exact"},{"name":"rare intellectual disability without developmental anomaly","type":"related"},{"name":"rare non-syndromic intellectual deficiency","type":"related"},{"name":"rare non-syndromic intellectual disability","type":"exact"}],"termid":"MONDO:0015108","xrefs":{"Monarch":{"xref_id":"0015108"}}}


id: FYPO:0004679
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of polyadenylated 25S rRNA measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA absent from cell during vegetative growth","termid":"FYPO:0003161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"polyadenylated 25S rRNA absent from cell","synonyms":[{"name":"polyadenylated 25S rRNA absent from cell during mitotic cell cycle","type":"related"},{"name":"polyadenylated 25S rRNA absent from cell during vegetative growth","type":"exact"},{"name":"polyadenylated 25S rRNA transcripts absent from cell during vegetative growth","type":"exact"},{"name":"undetectable polyadenylated 25S rRNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0004679"}


id: MONDO:0100024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the onset of seizures between 3 and 20 months of age (peak 6 months). Seizures may be frequent at onset but usually remit within 1 year from the onset. In untreated cases there can be isolated or brief clusters of seizures within the period from onset to remission. A minority of individuals may have epilepsy in later life. Some patients (with PRRT2 mutations) may develop paroxysmal kinesiogenic dyskinesia in later life.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"neonatal/infantile epilepsy syndrome","termid":"MONDO:0100022"},{"relation_name":"is_a","term_name":"infantile-onset epilepsy","termid":"MONDO:0100207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"self-limited familial infantile epilepsy","synonyms":[{"name":"SeLFIE","type":"exact"},{"name":"self-limited familial and non-familial infantile seizures","type":"exact"}],"termid":"MONDO:0100024","xrefs":{"Monarch":{"xref_id":"0100024"}}}


id: FYPO:0006958
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 2-oxoglutarate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular 2-oxoglutarate level","synonyms":[{"name":"increased 2-oxoglutarate accumulation","type":"related"},{"name":"increased cellular 2-oxoglutarate level during mitotic cell cycle","type":"related"},{"name":"increased cellular 2-oxoglutarate level during vegetative growth","type":"exact"}],"termid":"FYPO:0006958"}


id: MONDO:0006041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroendocrine neoplasm that arises from the lung. It is characterized by the presence of uniform polygonal cells with small or moderate amount of cytoplasm and inconspicuous nucleoli. The cells are usually arranged in organoid and trabecular patterns. It is classified as typical or atypical carcinoid tumor based on the number of mitotic figures and the absence or presence of necrosis. Atypical carcinoid tumors have a worse prognosis.","definition_xrefs":["NCIT:C4038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoid tumor","termid":"MONDO:0005369"},{"relation_name":"is_a","term_name":"lung neuroendocrine neoplasm","termid":"MONDO:0005454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lung carcinoid tumor","secondary_identifiers":["ONCOTREE:LUCA","EFO:1000037","UMLS:C0280089","MEDGEN:79070","SCTID:254627002"],"synonyms":[{"name":"carcinoid tumor (disease) of lung","type":"exact"},{"name":"carcinoid tumor of lung","type":"exact"},{"name":"carcinoid tumor of the lung","type":"exact"},{"name":"carcinoid tumour (disease) of lung","type":"exact"},{"name":"carcinoid tumour of lung","type":"exact"},{"name":"carcinoid tumour of the lung","type":"exact"},{"name":"lung carcinoid","type":"related"},{"name":"lung carcinoid tumor","type":"exact"},{"name":"lung carcinoid tumor (disease)","type":"exact"},{"name":"lung carcinoid tumour (disease)","type":"exact"},{"name":"pulmonary carcinoid tumor","type":"exact"},{"name":"pulmonary carcinoid tumour","type":"exact"}],"termid":"MONDO:0006041","xrefs":{"Monarch":{"xref_id":"0006041"}}}


id: PATO:0000133
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's placement which is defined by the angle between the bearer and an axis, or the angle between the bearer and another object.","definition_xrefs":["PATOC:JE"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orientation","secondary_identifiers":["PATO:0000137"],"synonyms":[{"name":"amount of rotation","type":"related"},{"name":"angle","type":"related"},{"name":"angular magnitude","type":"related"},{"name":"angular placement","type":"exact"},{"name":"plane angle","type":"related"}],"termid":"PATO:0000133"}


id: PBO:0083566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF DNF2/YDR093W","termid":"PBO:0083566"}


id: PBO:0060040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 28","termid":"PBO:0060040"}


id: GO:1902062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of betaine aldehyde.","definition_xrefs":["GOC:di","PMID:23563483","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"betaine aldehyde metabolic process","termid":"GO:1902061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"betaine aldehyde catabolic process","synonyms":[{"name":"betaine aldehyde breakdown","type":"exact"},{"name":"betaine aldehyde catabolism","type":"exact"},{"name":"betaine aldehyde degradation","type":"exact"}],"termid":"GO:1902062"}


id: GO:0007438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the oenocyte over time, from its formation to the mature structure. The oenocytes are large secretory cells found in clusters underlying the epidermis of larval abdominal segments.","definition_xrefs":["GOC:bf","PMID:11171397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"oenocyte differentiation","termid":"GO:0001742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oenocyte development","termid":"GO:0007438"}


id: GO:0120003
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A narrow rim of non-thickened membrane in between urothelial plaques in apical plasma membrane.","definition_xrefs":["PMID:21887288","GOC:krc","PMID:21468280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"},{"relation_name":"part_of","term_name":"apical plasma membrane","termid":"GO:0016324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"hinge region between urothelial plaques of apical plasma membrane","termid":"GO:0120003"}


id: GO:0032872
data:
  {"annotated_genes":["SJAG_02392","SJAG_04666","SJAG_01787","SJAG_04825","SJAG_03263","SJAG_00610","SJAG_03969","SJAG_00424","SJAG_04522","SJAG_05000","SJAG_01114"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98940,117813,106534,95338,107100,103303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[87559,90249,88914,91901,102344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903139"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signal transduction mediated by the stress-activated MAPK cascade.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of MAPK cascade","termid":"GO:0043408"},{"relation_name":"is_a","term_name":"regulation of stress-activated protein kinase signaling cascade","termid":"GO:0070302"},{"relation_name":"regulates","term_name":"stress-activated MAPK cascade","termid":"GO:0051403"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01114":null,"SJAG_01787":null,"SJAG_02392":null,"SJAG_03263":null,"SJAG_03969":null,"SJAG_04522":null,"SJAG_04666":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of stress-activated MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of p38 MAPK signaling","type":"exact"},{"name":"regulation of p38 MAPK signalling","type":"exact"},{"name":"regulation of stress-activated MAPK signaling pathway","type":"exact"},{"name":"regulation of stress-activated MAPK signalling pathway","type":"exact"},{"name":"regulation of stress-activated MAPKKK cascade","type":"exact"},{"name":"regulation of stress-activated MAPKKK signaling pathway","type":"exact"},{"name":"regulation of stress-activated MAPKKK signalling pathway","type":"exact"}],"termid":"GO:0032872","terms_by_termid":{"GO:1903138":null,"GO:1903139":null}}


id: GO:0007272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which glial cells envelop neuronal cell bodies and/or axons to form an insulating layer. This can take the form of myelinating or non-myelinating ensheathment.","definition_xrefs":["GOC:dph","GOC:dgh","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ensheathment of neurons","synonyms":[{"name":"ionic insulation of neurons by glial cells","type":"related"}],"termid":"GO:0007272"}


id: PBO:0083058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrofolate reductase involved in tetrahydrofolate biosynthesis; required for respiratory metabolism; mutation is functionally complemented by human DHFR","termid":"PBO:0083058"}


id: GO:0015372
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (glutamate or aspartate)(out) + Na+(out) = (glutamate or aspartate)(in) + Na+(in).","definition_xrefs":["TC:2.A.23.1.1"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamate/aspartate:sodium symporter activity (obsolete GO:0015372)","synonyms":[{"name":"glutamate/aspartate:sodium symporter activity","type":"exact"}],"termid":"GO:0015372"}


id: PR:O94374
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- imp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin subunit alpha-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.08c","synonyms":[{"name":"Spom972h-imp1","type":"exact"},{"name":"importin-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"karyopherin subunit alpha-2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94374"}


id: GO:0045722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gluconeogenesis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gluconeogenesis","termid":"GO:0006111"},{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of glucose metabolic process","termid":"GO:0010907"},{"relation_name":"positively_regulates","term_name":"gluconeogenesis","termid":"GO:0006094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"positive regulation of gluconeogenesis","synonyms":[{"name":"activation of gluconeogenesis","type":"narrow"},{"name":"stimulation of gluconeogenesis","type":"narrow"},{"name":"up regulation of gluconeogenesis","type":"exact"},{"name":"up-regulation of gluconeogenesis","type":"exact"},{"name":"upregulation of gluconeogenesis","type":"exact"}],"termid":"GO:0045722"}


id: MONDO:0859336
data:
  {"annotated_genes":["SJAG_04513"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85086],"is_not":false,"summary":null,"term":"MONDO:0859336"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04513":null},"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy, congenital, with or without seizures","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1824047","OMIM:620166","UMLS:C5774274"],"termid":"MONDO:0859336","terms_by_termid":{"MONDO:0859336":null},"xrefs":{"Monarch":{"xref_id":"0859336"}}}


id: GO:0018953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving p-cymene, 1-methyl-4-isopropylbenzene, one of the alkyl-substituted aromatic hydrocarbons found in volatile oils from over 100 plants.","definition_xrefs":["UM-BBD_pathwayID:pcy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpene metabolic process","termid":"GO:0043692"},{"relation_name":"is_a","term_name":"toluene-containing compound metabolic process","termid":"GO:0072490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"p-cymene metabolic process","synonyms":[{"name":"p-cymene metabolism","type":"exact"}],"termid":"GO:0018953"}


id: PBO:0110232
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pseudo HisTone","termid":"PBO:0110232"}


id: PBO:0039224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 7 member A3","termid":"PBO:0039224"}


id: MONDO:0008410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by osteochondrosis of the vertebral epiphyses in childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrosis","termid":"MONDO:0018381"},{"relation_name":"is_a","term_name":"osteonecrosis of genetic origin","termid":"MONDO:0018383"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scheuermann disease","secondary_identifiers":["NCIT:C34999","ICD9:732.0","MEDGEN:19885","MESH:D012544","UMLS:C0036310","Orphanet:3135","OMIM:181440","DOID:13300","SCTID:53406005"],"synonyms":[{"name":"Calve's disease","type":"exact"},{"name":"Scheuermann disease","type":"exact"},{"name":"Scheuermann juvenile kyphosis","type":"related"},{"name":"Scheuermann kyphosis","type":"related"},{"name":"Scheuermann's disease","type":"exact"},{"name":"Scheuermann's kyphosis","type":"exact"},{"name":"Sherman's disease","type":"exact"},{"name":"familial Scheuermann disease","type":"related"},{"name":"familial Scheuermann juvenile kyphosis","type":"exact"},{"name":"familial spinal osteochondrosis","type":"exact"},{"name":"juvenile kyphosis","type":"related"},{"name":"juvenile osteochondritis of the spine","type":"exact"},{"name":"juvenile osteochondrosis of Scheurermann","type":"exact"},{"name":"juvenile osteochondrosis of spine","type":"exact"},{"name":"spinal Osteochondrosis","type":"related"}],"termid":"MONDO:0008410","xrefs":{"Monarch":{"xref_id":"0008410"}}}


id: GO:0009719
data:
  {"annotated_genes":["SJAG_01837","SJAG_03048","SJAG_01805","SJAG_04332","SJAG_00082","SJAG_04140","SJAG_04183"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89476,93288,110693,116174,101884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[103659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072429"},{"annotations":[101895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072441"},{"annotations":[89481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072479"},{"annotations":[101896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990820"},{"annotations":[101897,94031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus arising within the organism.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null,"SJAG_04183":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to endogenous stimulus","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0009719","terms_by_termid":{"GO:0072429":null,"GO:0072435":null,"GO:0072441":null,"GO:0072479":null,"GO:0140429":null,"GO:1990820":null}}


id: PBO:0078156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 34","termid":"PBO:0078156"}


id: FYPO:0001983
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell is too low to detect. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level","termid":"FYPO:0000835"},{"relation_name":"is_a","term_name":"substance absent from cell","termid":"FYPO:0001888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"protein absent from cell","synonyms":[{"name":"undetectable cellular protein level","type":"exact"}],"termid":"FYPO:0001983"}


id: SO:0001876
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A partial DNA sequence assembly of a chromosome or full genome, which contains gaps that are filled with N's.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_assembly","termid":"SO:0000353"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial_genomic_sequence_assembly","synonyms":[{"name":"partial genomic sequence assembly","type":"exact"},{"name":"pseudomolecule","type":"broad"},{"name":"sequence assembly with N-gaps","type":"exact"}],"termid":"SO:0001876"}


id: PBO:0072128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 5","termid":"PBO:0072128"}


id: GO:0017196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of the N-terminal methionine of proteins to form the derivative N-acetyl-L-methionine.","definition_xrefs":["RESID:AA0049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid acetylation","termid":"GO:0006474"},{"relation_name":"is_a","term_name":"peptidyl-methionine modification","termid":"GO:0018206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"N-terminal peptidyl-methionine acetylation","termid":"GO:0017196"}


id: PBO:0011407
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_occurs_in","termid":"PBO:0011407"}


id: PR:Q9P7Q9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- alg9 gene.","definition_xrefs":["UniProtKB:Q9P7Q9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase alg9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1834.05","synonyms":[{"name":"Dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-alg9","type":"exact"},{"name":"asparagine-linked glycosylation protein 9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7Q9"}


id: MONDO:0004371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A clear cell meningioma arising in multiple areas of the spinal cord characterized by the presence of clear glycogen-rich polygonal cells.","definition_xrefs":["NCIT:C5287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clear cell meningioma","termid":"MONDO:0002918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal multifocal clear cell meningioma","secondary_identifiers":["DOID:7824","UMLS:C1336051","MEDGEN:277661"],"synonyms":[{"name":"multifocal clear cell meningioma of spine","type":"exact"},{"name":"multifocal clear cell meningioma of the spine","type":"related"},{"name":"spinal multifocal clear cell meningioma","type":"exact"}],"termid":"MONDO:0004371","xrefs":{"Monarch":{"xref_id":"0004371"}}}


id: GO:0072264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric glomerular endothelium over time, from its formation to the mature structure. The metanephric glomerular endothelium is an epithelial tissue that covers the internal surfaces of the glomerulus of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular endothelium development","termid":"GO:0072011"},{"relation_name":"is_a","term_name":"metanephric glomerular epithelium development","termid":"GO:0072244"},{"relation_name":"part_of","term_name":"metanephric glomerulus vasculature development","termid":"GO:0072239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular endothelium development","termid":"GO:0072264"}


id: PBO:0036181
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein-protein_interaction_phenotype","termid":"PBO:0036181"}


id: PBO:0064453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein O-fucosyltransferase 2","termid":"PBO:0064453"}


id: MONDO:0026777
data:
  {"annotated_genes":["SJAG_00853"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85386],"is_not":false,"summary":null,"term":"MONDO:0026777"}]},"cv_name":"mondo","definition":"An adult-onset inflammatory disease that affects only males and is caused by somatic, not germline, mutations. The disorder is characterized by adult onset of rheumatologic symptoms at a mean age of 64 years. Features include recurrent fevers, pulmonary and dermatologic inflammatory manifestations, vasculitis, deep vein thrombosis, arthralgias, and ear and nose chondritis. Laboratory studies indicate hematologic abnormalities, including macrocytic anemia, as well as increased levels of acute-phase reactants; about half of patients have positive autoantibodies. Bone marrow biopsy shows degenerative vacuolization restricted to myeloid and erythroid precursor cells, as well as variable hematopoietic dyspoiesis and dysplasias. The condition does not respond to rheumatologic medications and the features may result in premature death.","definition_xrefs":["OMIM:301054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00853":null},"genotype_count":0,"is_obsolete":false,"name":"VEXAS syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:596753","NCIT:C181924","UMLS:C5435753","DOID:0080828","GARD:15001","MEDGEN:1765785"],"synonyms":[{"name":"VEXAS","type":"exact"},{"name":"VEXAS syndrome, somatic","type":"exact"},{"name":"vacuoles, E1 enzyme, X-linked, autoinflammatory, somatic syndrome","type":"exact"}],"termid":"MONDO:0026777","terms_by_termid":{"MONDO:0026777":null},"xrefs":{"Monarch":{"xref_id":"0026777"}}}


id: PBO:0052245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 14","termid":"PBO:0052245"}


id: MONDO:0022757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 20 trisomy, (also called trisomy 20) is a condition in which a fetus or individual has an extra full or partial copy of chromosome 20 in some or allof of his/her cells. An extra full copy of chromosome 20 in all of a person's cells is rare, and almost all fetuses with this do not survive past the first trimester ofpregnancy. The presence of an extra copyof only part of chromosome 20 is called partial trisomy 20; and an extra copy of chromosome 20 in only some of a person's cells is called mosaic trisomy 20. Mosaic trisomy 20 is the most common type of chromosome 20 trisomy and is one of the more common chromosomal abnormalities found during prenatal diagnostic testing. Studies have shown that the child is normal in the vast majority of prenatally diagnosed individuals. However, features that have been reported include spinal abnormalities (including spinal stenosis, vertebral fusion, and kyphosis), hypotonia (decreased muscle tone), life long constipation, sloped shoulders, and significant learning disabilities despite normal intelligence. Trisomy 20 usually results from an error that occurs when an egg or sperm cell develops (before fertilization); mosaic trisomy 20 usually results from errors in cell division soon after fertilization.","definition_xrefs":["GARD:0005332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 20 disorder","termid":"MONDO:0700025"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 20 trisomy","secondary_identifiers":["GARD:5332","MEDGEN:120542","MESH:C535372","UMLS:C0265479","NCIT:C36397"],"synonyms":[{"name":"mosaic trisomy 20","type":"related"},{"name":"trisomy 20","type":"related"},{"name":"trisomy 20 mosaicism","type":"related"},{"name":"trisomy chromosome 20","type":"related"}],"termid":"MONDO:0022757","xrefs":{"Monarch":{"xref_id":"0022757"}}}


id: PBO:0042236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centriolar coiled-coil protein 110","termid":"PBO:0042236"}


id: PBO:0084164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Highly conserved negative regulator of RNA polymerase III; involved in tRNA processing and stability; inhibits tRNA degradation via rapid tRNA decay (RTD) pathway; binds N-terminal domain of Rpc160p subunit of Pol III to prevent closed-complex formation; regulated by phosphorylation mediated by TORC1, protein kinase A, Sch9p, casein kinase 2; localizes to cytoplasm during vegetative growth and translocates to nucleus and nucleolus under stress conditions","termid":"PBO:0084164"}


id: PBO:0054696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2105","termid":"PBO:0054696"}


id: FYPO:0002645
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of threonine residues in one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein threonine phosphorylation during vegetative growth (obsolete FYPO:0002645)","synonyms":[{"name":"decreased peptidyl-threonine phosphorylation during vegetative growth","type":"exact"},{"name":"decreased protein threonine phosphorylation during mitotic cell cycle","type":"related"},{"name":"decreased threonine phosphorylation during vegetative growth","type":"exact"},{"name":"reduced protein threonine phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002645"}


id: MOD:00463
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to 3'-hydroxy-L-kynurenine.","definition_xrefs":["PubMed:9252331","OMSSA:58","Unimod:350#W"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon oxygenated residue","termid":"MOD:00679"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-hydroxy-L-kynurenine","synonyms":[{"name":"Trp->Hydroxykynurenin","type":"related"},{"name":"hydroxykynureninw","type":"exact"},{"name":"tryptophan oxidation to hydroxykynurenin","type":"related"}],"termid":"MOD:00463"}


id: PBO:0108906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPCPD1 pseudogene 1","termid":"PBO:0108906"}


id: GO:0016898
data:
  {"annotated_genes":["SJAG_03804"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004458"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces a cytochrome molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03804":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-OH group of donors, cytochrome as acceptor","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.1.2.-"],"termid":"GO:0016898","terms_by_termid":{"GO:0004458":null}}


id: GO:0034160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 8 signaling pathway.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 8 signaling pathway","termid":"GO:0034159"},{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039532"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 8 signaling pathway","termid":"GO:0034158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 8 signaling pathway","synonyms":[{"name":"negative regulation of TLR8 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 8 signalling pathway","type":"exact"}],"termid":"GO:0034160"}


id: PBO:0040936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 7","termid":"PBO:0040936"}


id: FYPO:0002692
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to paraquat. Cells stop growing (and may die) at a concentration of paraquat that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to paraquat","synonyms":[{"name":"hypersensitive to paraquat","type":"exact"},{"name":"sensitive to paraquat during mitotic cell cycle","type":"related"},{"name":"sensitive to paraquat during vegetative growth","type":"exact"}],"termid":"FYPO:0002692"}


id: PATO:0001953
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pattern quality inhering in a bearer by virtue of the bearer's consisting of paired parts that alternately cross each other.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regular spatial pattern","termid":"PATO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decussate","synonyms":[{"name":"crosscutting","type":"exact"},{"name":"intercrossing","type":"exact"},{"name":"intersecting","type":"exact"}],"termid":"PATO:0001953"}


id: PBO:0069502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 769, pseudogene","termid":"PBO:0069502"}


id: PBO:0083512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF ERG7/YHR072W","termid":"PBO:0083512"}


id: GO:0051251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lymphocyte activation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte activation","termid":"GO:0002696"},{"relation_name":"is_a","term_name":"regulation of lymphocyte activation","termid":"GO:0051249"},{"relation_name":"positively_regulates","term_name":"lymphocyte activation","termid":"GO:0046649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lymphocyte activation","synonyms":[{"name":"activation of lymphocyte activation","type":"narrow"},{"name":"stimulation of lymphocyte activation","type":"narrow"},{"name":"up regulation of lymphocyte activation","type":"exact"},{"name":"up-regulation of lymphocyte activation","type":"exact"},{"name":"upregulation of lymphocyte activation","type":"exact"}],"termid":"GO:0051251"}


id: PBO:0071872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 10","termid":"PBO:0071872"}


id: GO:0005012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete Neu/ErbB-2 receptor activity (obsolete GO:0005012)","synonyms":[{"name":"Neu/ErbB-2 receptor activity","type":"exact"}],"termid":"GO:0005012"}


id: GO:0070374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the ERK1 and ERK2 cascade.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of MAPK cascade","termid":"GO:0043410"},{"relation_name":"is_a","term_name":"regulation of ERK1 and ERK2 cascade","termid":"GO:0070372"},{"relation_name":"positively_regulates","term_name":"ERK1 and ERK2 cascade","termid":"GO:0070371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ERK1 and ERK2 cascade","synonyms":[{"name":"activation of ERK1 and ERK2 cascade","type":"narrow"},{"name":"positive regulation of ERK cascade","type":"broad"},{"name":"positive regulation of ERK1 and ERK2 signaling pathway","type":"exact"},{"name":"positive regulation of ERK1 and ERK2 signalling pathway","type":"exact"},{"name":"positive regulation of ERK1 cascade","type":"narrow"},{"name":"positive regulation of ERK1/2 cascade","type":"exact"},{"name":"positive regulation of ERK2 cascade","type":"narrow"},{"name":"positive regulation of MAPK1 cascade","type":"narrow"},{"name":"positive regulation of MAPK3 cascade","type":"narrow"},{"name":"stimulation of ERK1 and ERK2 cascade","type":"narrow"},{"name":"up regulation of ERK1 and ERK2 cascade","type":"exact"},{"name":"up-regulation of ERK1 and ERK2 cascade","type":"exact"},{"name":"upregulation of ERK1 and ERK2 cascade","type":"exact"}],"termid":"GO:0070374"}


id: GO:0030715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in volume of an oocyte during the growth phase of the egg chamber, once the egg chamber has left the germarium. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["ISBN:0879694238","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oocyte growth","termid":"GO:0001555"},{"relation_name":"part_of","term_name":"growth of a germarium-derived egg chamber","termid":"GO:0007295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte growth in germarium-derived egg chamber","termid":"GO:0030715"}


id: PBO:0043453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNN3 divergent transcript","termid":"PBO:0043453"}


id: MONDO:0007906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial Partial lipodystrophy, Dunnigan type (FPLD2) is a rare form of genetic lipodystrophy characterized by a loss of subcutaneous adipose tissue from the trunk, buttocks and limbs; fat accumulation in the neck, face, axillary and pelvic regions; muscular hypertrophy; and usually associated with metabolic complications such as insulin resistance, diabetes mellitus, dyslipidemia and liver steatosis.","definition_xrefs":["Orphanet:2348"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"progeroid syndrome","termid":"MONDO:0015333"},{"relation_name":"is_a","term_name":"familial partial lipodystrophy","termid":"MONDO:0020088"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"familial partial lipodystrophy, Dunnigan type","secondary_identifiers":["DOID:0070202","MEDGEN:354526","SCTID:715439000","icd11.foundation:2068585355","UMLS:C1720860","OMIM:151660","GARD:3126"],"synonyms":[{"name":"Dunnigan syndrome","type":"exact"},{"name":"FPL2","type":"related"},{"name":"FPLD2","type":"exact"},{"name":"familial lipodystrophy of limbs and lower trunk","type":"exact"},{"name":"familial partial lipodystrophy Dunnigan type","type":"exact"},{"name":"familial partial lipodystrophy type 2","type":"exact"},{"name":"lipodystrophy, familial partial, Dunnigan type","type":"related"},{"name":"lipodystrophy, familial partial, type 2","type":"related"},{"name":"lipodystrophy, familial, of limbs and Lower trunk","type":"related"},{"name":"lipodystrophy, reverse partial","type":"related"},{"name":"reverse partial lipodystrophy","type":"exact"}],"termid":"MONDO:0007906","xrefs":{"Monarch":{"xref_id":"0007906"}}}


id: PBO:0085543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; least basic of non-acidic ribosomal proteins; phosphorylated in vivo; essential for viability; homologous to mammalian ribosomal protein S5 and bacterial S7","termid":"PBO:0085543"}


id: GO:0072122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of extraglomerular glomerular mesangium cells by cell division, resulting in the expansion of their population. Extraglomerular mesangial cells (also known as lacis cells, Goormaghtigh cells) are light-staining cells in the kidney found outside the glomerulus, near the vascular pole and macula densa.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation involved in kidney development","termid":"GO:0072111"},{"relation_name":"part_of","term_name":"nephron development","termid":"GO:0072006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"extraglomerular mesangial cell proliferation","synonyms":[{"name":"Goormaghtigh proliferation","type":"related"},{"name":"lacis cell proliferation","type":"related"}],"termid":"GO:0072122"}


id: GO:0019170
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-lactaldehyde + NAD+ = methylglyoxal + NADH + H+.","definition_xrefs":["EC:1.1.1.78"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"methylglyoxal reductase (NADH) activity","secondary_identifiers":["MetaCyc:D-LACTALDEHYDE-DEHYDROGENASE-RXN","RHEA:24528"],"synonyms":[{"name":"(R)-lactaldehyde:NAD+ oxidoreductase activity","type":"related"},{"name":"D-lactaldehyde dehydrogenase activity","type":"exact"},{"name":"methylglyoxal reductase (NADH-dependent) activity","type":"exact"},{"name":"methylglyoxal reductase activity","type":"exact"}],"termid":"GO:0019170"}


id: GO:0099643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any signal release from a synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"},{"relation_name":"part_of","term_name":"synaptic signaling","termid":"GO:0099536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"signal release from synapse","termid":"GO:0099643"}


id: PR:Q9Y7T9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC63.13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7T9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized J domain-containing protein C63.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC63.13","synonyms":[{"name":"Spom972h-SPCC63.13","type":"exact"}],"termid":"PR:Q9Y7T9"}


id: GO:1904380
data:
  {"annotated_genes":["SJAG_01858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93027],"is_not":false,"summary":null,"term":"GO:1904380"}]},"cv_name":"biological_process","definition":"Any protein alpha-1,2-demannosylation that takes place in the endoplasmic reticulum quality control compartment (ERQC).","definition_xrefs":["GOC:TermGenie","GO_REF:0000062","GOC:bf","PMID:24519966","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein alpha-1,2-demannosylation","termid":"GO:0036508"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01858":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum mannose trimming","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-901032"],"synonyms":[{"name":"ER mannose trimming","type":"exact"},{"name":"ER protein alpha-1,2-demannosylation","type":"exact"},{"name":"glycoprotein mannose trimming in ER quality control compartment","type":"related"},{"name":"glycoprotein mannose trimming in ER-derived quality control compartment","type":"related"},{"name":"glycoprotein mannose trimming in ERQC","type":"related"},{"name":"glycoprotein mannose trimming in endoplasmic reticulum quality control compartment","type":"related"},{"name":"protein alpha-1,2-demannosylation in ER","type":"exact"},{"name":"protein alpha-1,2-demannosylation in ER quality control compartment","type":"exact"},{"name":"protein alpha-1,2-demannosylation in ER-derived quality control compartment","type":"related"},{"name":"protein alpha-1,2-demannosylation in ERQC","type":"exact"},{"name":"protein alpha-1,2-demannosylation in endoplasmic reticulum","type":"exact"},{"name":"protein alpha-1,2-demannosylation in endoplasmic reticulum quality control compartment","type":"exact"}],"termid":"GO:1904380","terms_by_termid":{"GO:1904380":null}}


id: SO:0000567
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome may be generated by recombination between two inversions; presumed to have a deficiency or duplication at each end of the inversion.","definition_xrefs":["FB:km"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aneuploid_chromosome","termid":"SO:0000550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inversion_derived_aneuploid_chromosome","synonyms":[{"name":"inversion derived aneuploid chromosome","type":"exact"}],"termid":"SO:0000567"}


id: PBO:0000576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocon gamma subunit Sss1 (predicted)","termid":"PBO:0000576"}


id: PBO:0080371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VOPP1 divergent transcript","termid":"PBO:0080371"}


id: GO:0022803
data:
  {"annotated_genes":["SJAG_MIT37","SJAG_03114","SJAG_05229","SJAG_MIT09","SJAG_03895","SJAG_01090","SJAG_02877","SJAG_00542","SJAG_02564","SJAG_04471","SJAG_04731","SJAG_07003","SJAG_02322","SJAG_04136","SJAG_00915","SJAG_03925","SJAG_MIT15","SJAG_00438","SJAG_00985","SJAG_00048","SJAG_04122","SJAG_02532","SJAG_02598","SJAG_01649","SJAG_02019","SJAG_05204","SJAG_00133","SJAG_00836","SJAG_05342","SJAG_01168","SJAG_02105","SJAG_04668"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[118501,98754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008519"},{"annotations":[116882,113934,91889,95170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005262"},{"annotations":[95471,108862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005227"},{"annotations":[96608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015267"},{"annotations":[111156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005254"},{"annotations":[99130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008331"},{"annotations":[103269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140135"},{"annotations":[95172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008381"},{"annotations":[118571,92765,104501,103184,107393,115344,92339,103155,92338,101318,102537,108278,118559,88610,118565,93353,107300,94330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046933"},{"annotations":[113419,99131,91833,91890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015275"},{"annotations":[88977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008308"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a single solute from one side of a membrane to the other by a mechanism involving conformational change, either by facilitated diffusion or in a membrane potential dependent process if the solute is charged.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00048":null,"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01090":null,"SJAG_01168":null,"SJAG_01649":null,"SJAG_02019":null,"SJAG_02105":null,"SJAG_02322":null,"SJAG_02532":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02877":null,"SJAG_03114":null,"SJAG_03895":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04136":null,"SJAG_04471":null,"SJAG_04668":null,"SJAG_04731":null,"SJAG_05204":null,"SJAG_05229":null,"SJAG_05342":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"passive transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Facilitated_diffusion","GO:0022814"],"synonyms":[{"name":"facilitated diffusion","type":"related"},{"name":"porters","type":"broad"},{"name":"uniporter activity z","type":"narrow"}],"termid":"GO:0022803","terms_by_termid":{"GO:0005227":null,"GO:0005254":null,"GO:0005262":null,"GO:0008308":null,"GO:0008331":null,"GO:0008381":null,"GO:0008519":null,"GO:0015267":null,"GO:0015275":null,"GO:0046933":null,"GO:0140135":null}}


id: GO:0120324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphological, biochemical and genetic changes that induce the differentiation of bloodstream form trypomastigotes into procyclic trypomastigotes in some of the Trypanosomatidae species such as Trypanosoma brucei. This process occurs inside the midgut of the tsetse fly vectors in T. brucei.","definition_xrefs":["PMID:10593184","PMID:17997129","GOC:ach","PMID:1698624","PMID:3194363","PMID:3194362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"development of symbiont in host","termid":"GO:0044114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"procyclogenesis","termid":"GO:0120324"}


id: GO:0097455
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Paranodal terminations of Schwann cells that do not directly contact the paranodal axon membrane. Usually found in thicker myelin.","definition_xrefs":["PMID:15988042","NIF_Subcellular:sao937871668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell projection","termid":"GO:0097386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spiny bracelet of Nageotte","termid":"GO:0097455"}


id: PBO:0040371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5PB pseudogene 8","termid":"PBO:0040371"}


id: PBO:0005622
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homotrimer","termid":"PBO:0005622"}


id: PBO:0040827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"baculoviral IAP repeat containing 2","termid":"PBO:0040827"}


id: MONDO:0000251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diarrhea that results from either increased or decreased motility in the bowel.","direct_ancestors":[{"relation_name":"is_a","term_name":"diarrheal disease","termid":"MONDO:0001673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"diarrheal disease secondary to altered bowel motility","synonyms":[{"name":"diarrhea secondary to altered bowel motility","type":"exact"},{"name":"diarrhoea secondary to altered bowel motility","type":"exact"},{"name":"motility-related diarrhea","type":"exact"},{"name":"motility-related diarrhoea","type":"exact"}],"termid":"MONDO:0000251","xrefs":{"Monarch":{"xref_id":"0000251"}}}


id: GO:0016477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled self-propelled movement of a cell from one site to a destination guided by molecular cues.","definition_xrefs":["GOC:ems","GOC:cjm","GOC:pf","GOC:dph","Wikipedia:Cell_migration"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration","termid":"GO:0016477"}


id: GO:0071209
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a U7 small nuclear RNA (U7 snRNA).","definition_xrefs":["GOC:mah","PMID:12975319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"U7 snRNA binding","termid":"GO:0071209"}


id: GO:0009631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases freezing tolerance of an organism in response to low, nonfreezing temperatures.","definition_xrefs":["GOC:syr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cold","termid":"GO:0009409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cold acclimation","termid":"GO:0009631"}


id: MONDO:0011241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudoacromegaly with severe insulin resistance","secondary_identifiers":["OMIM:602511","MESH:C566531","MEDGEN:400727","UMLS:C1865284"],"synonyms":[{"name":"pseudoacromegaly with severe insulin resistance","type":"exact"}],"termid":"MONDO:0011241","xrefs":{"Monarch":{"xref_id":"0011241"}}}


id: MONDO:0001312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A acute transudative otitis media with thin, watery and sterile effusion.","definition_xrefs":["DOID:11557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute transudative otitis media","termid":"MONDO:0002738"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute serous otitis media","secondary_identifiers":["ICD10CM:H65.0","ICD9:381.01","MEDGEN:509955","SCTID:194240006","UMLS:C0155415"],"synonyms":[{"name":"acute non-suppurative otitis media - serous","type":"exact"}],"termid":"MONDO:0001312","xrefs":{"Monarch":{"xref_id":"0001312"}}}


id: GO:1990508
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cyclin-dependent kinase complex which reversibly associates with the Mediator complex. In Saccharomyces cerevisiae it consists of SSN2, SSN3, SSN8 and SRB8.","definition_xrefs":["GOC:bhm","PMID:12200444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0019908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"CKM complex","synonyms":[{"name":"CDK8 kinase module","type":"exact"},{"name":"SRB8-SRB11 complex","type":"exact"},{"name":"SRB8/9/10/11 complex","type":"exact"}],"termid":"GO:1990508"}


id: GO:0061518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a microglial cell population by cell division.","definition_xrefs":["GOC:dph","PMID:17344397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell proliferation","termid":"GO:0014009"},{"relation_name":"is_a","term_name":"macrophage proliferation","termid":"GO:0061517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microglial cell proliferation","termid":"GO:0061518"}


id: GO:0030146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of renal water excretion.","definition_xrefs":["GOC:mtg_cardio","ISBN:0198506732","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete diuresis (obsolete GO:0030146)","secondary_identifiers":["Wikipedia:Diuresis"],"synonyms":[{"name":"diuresis","type":"exact"},{"name":"positive regulation of renal water excretion","type":"exact"},{"name":"renal water excretion","type":"broad"}],"termid":"GO:0030146"}


id: GO:0015459
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of a potassium channel.","definition_xrefs":["GOC:mah","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ion channel regulator activity","termid":"GO:0099106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0003674"],"is_obsolete":false,"name":"potassium channel regulator activity","synonyms":[{"name":"potassium channel gating activity","type":"exact"}],"termid":"GO:0015459"}


id: FYPO:0001002
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell does not undergo the normal two rounds of cell division prior to entering quiescence (G0).","definition_xrefs":["PMID:19366728","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal G1 to G0 transition","termid":"FYPO:0000427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished cell division prior to G0 entry","synonyms":[{"name":"cell division prior to G0 entry abolished","type":"exact"},{"name":"loss of pre-quiescence cell divisions following nitrogen starvation","type":"exact"}],"termid":"FYPO:0001002"}


id: MONDO:0100280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoplasmacytic lymphoma","termid":"MONDO:0000432"},{"relation_name":"is_a","term_name":"indolent B-cell non-Hodgkin lymphoma","termid":"MONDO:0017594"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"Waldenstrom macroglobulinemia","secondary_identifiers":["MedDRA:10047801","ICD10CM:C88.0","OMIMPS:153600","ONCOTREE:WM","MEDGEN:6174","NCIT:C80307","MESH:D008258","NORD:1834","DOID:0060901","GARD:7872","UMLS:C0024419","EFO:0009441","Orphanet:33226"],"synonyms":[{"name":"Waldenstroem's macroglobulinemia","type":"related"},{"name":"Waldenstrom macroglobulinemia","type":"exact"},{"name":"Waldenstrom's macroglobulinaemia","type":"related"},{"name":"Waldenstrom's macroglobulinemia","type":"exact"},{"name":"Waldenstrom's syndrome","type":"related"},{"name":"Waldenström Macroglobulinemia","type":"exact"},{"name":"Waldenström macroglobulinemia","type":"exact"},{"name":"lymphoplasmacytic lymphoma with IgM gammopathy","type":"exact"},{"name":"macroglobulinemia of Waldenstrom","type":"related"}],"termid":"MONDO:0100280","xrefs":{"Monarch":{"xref_id":"0100280"}}}


id: PR:O13998
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An obg-like ATPase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01661","PANTHER:PTHR23305:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obg-like ATPase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.03c","secondary_identifiers":["UniProtKB:O13998"],"synonyms":[{"name":"Spom972h-OLA1","type":"exact"}],"termid":"PR:O13998"}


id: PBO:0001124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS complex subunit Vps16 (predicted)","termid":"PBO:0001124"}


id: GO:0101020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: estrogen + reduced [NADPH--hemoprotein reductase] + O2 = 16-alpha-hydroxyestrogen + oxidized [NADPH--hemoprotein reductase] + H2O.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"estrogen 16-alpha-hydroxylase activity","synonyms":[{"name":"oestrogen 16-alpha-hydroxylase activity","type":"exact"}],"termid":"GO:0101020"}


id: PBO:0070581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 47","termid":"PBO:0070581"}


id: GO:0048353
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Nucleus resulting from the fusion of the male gamete and two polar nuclei in the central cell of the embryo sac.","definition_xrefs":["ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"primary endosperm nucleus","termid":"GO:0048353"}


id: MONDO:0015762
data:
  {"annotated_genes":["SJAG_00938","SJAG_03011","SJAG_03363","SJAG_05194"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86461,86460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030810"},{"annotations":[85365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031040"},{"annotations":[86399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011156"},{"annotations":[85031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011214"}]},"cv_name":"mondo","definition":"Progressive familial intrahepatic cholestasis (PFIC) refers to a heterogeneous group of autosomal recessive disorders of childhood that disrupt bile formation and present with cholestasis of hepatocellular origin.","definition_xrefs":["Orphanet:172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"familial intrahepatic cholestasis","termid":"MONDO:0017290"},{"relation_name":"is_a","term_name":"inborn disorder of bilirubin metabolism","termid":"MONDO:0017755"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null,"SJAG_03363":null,"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005066","MONDO:0002515"],"is_obsolete":false,"name":"progressive familial intrahepatic cholestasis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2200933","NCIT:C84453","UMLS:C0268312","icd11.foundation:1457142642","DOID:0070221","NANDO:1201042","OMIMPS:211600","MEDGEN:75668","GARD:15255"],"synonyms":[{"name":"PFIC","type":"exact"},{"name":"cholestasis, progressive familial intrahepatic","type":"exact"}],"termid":"MONDO:0015762","terms_by_termid":{"MONDO:0011156":null,"MONDO:0011214":null,"MONDO:0030810":null,"MONDO:0031040":null},"xrefs":{"Monarch":{"xref_id":"0015762"}}}


id: PBO:0073539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing ring finger 1","termid":"PBO:0073539"}


id: PBO:0027461
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_incorporation_of_ATP_opposite_8-oxo-dG","termid":"PBO:0027461"}


id: MONDO:0021298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the oropharynx.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pharynx carcinoma in situ","termid":"MONDO:0000372"},{"relation_name":"is_a","term_name":"oropharyngeal carcinoma","termid":"MONDO:0044926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"carcinoma in situ of oropharynx","secondary_identifiers":["UMLS:C0347099","NCIT:C4590","SCTID:92668003","icd11.foundation:364791852","MEDGEN:83852"],"synonyms":[{"name":"carcinoma in situ of oropharynx","type":"exact"},{"name":"carcinoma in situ of the oropharynx","type":"exact"},{"name":"oropharyngeal cancer stage 0","type":"exact"},{"name":"oropharyngeal carcinoma in situ","type":"exact"},{"name":"oropharynx carcinoma in situ","type":"exact"},{"name":"oropharynx in situ carcinoma","type":"exact"},{"name":"stage 0 carcinoma of oropharynx","type":"exact"},{"name":"stage 0 carcinoma of the oropharynx","type":"exact"},{"name":"stage 0 oropharyngeal cancer","type":"exact"},{"name":"stage 0 oropharyngeal carcinoma","type":"exact"},{"name":"stage 0 oropharyngeal carcinoma aJCC v6","type":"exact"},{"name":"stage 0 oropharyngeal carcinoma aJCC v6 and v7","type":"exact"},{"name":"stage 0 oropharyngeal carcinoma aJCC v7","type":"exact"},{"name":"stage 0 oropharyngeal carcinoma in situ","type":"exact"},{"name":"stage 0 oropharyngeal throat cancer","type":"exact"},{"name":"stage 0 oropharynx carcinoma","type":"exact"}],"termid":"MONDO:0021298","xrefs":{"Monarch":{"xref_id":"0021298"}}}


id: PBO:0116266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase, also known as reptin; conserved component of multiple complexes including the INO80 complex, the Swr1 complex, the R2TP complex (Rvb1-Rvb2-Tah1-Pih1) and the TTT Hsp90 cochaperone complex that is involved in chromatin remodeling and telomeric chromatin regulation; involved in multiple processes such as chromatin remodeling, box C/D snoRNP assembly, and RNA polymerase II assembly; member of the AAA+ and RuvB protein families, similar to Rvb1p","termid":"PBO:0116266"}


id: MONDO:0060690
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenytoin toxicity","secondary_identifiers":["MEDGEN:101775","OMIM:617955","UMLS:C0149969"],"synonyms":[{"name":"arene oxide detoxification defect","type":"related"},{"name":"diphenylhydantoin, defect in hydroxylation of","type":"related"},{"name":"fetal hydantoin syndrome","type":"related"},{"name":"foetal hydantoin syndrome","type":"related"},{"name":"phenytoin toxicity","type":"exact"}],"termid":"MONDO:0060690","xrefs":{"Monarch":{"xref_id":"0060690"}}}


id: PBO:0062948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferation-associated 2G4 pseudogene 6","termid":"PBO:0062948"}


id: PBO:0060415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAA50 pseudogene 2","termid":"PBO:0060415"}


id: GO:0042383
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer membrane of a muscle cell, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"sarcolemma","secondary_identifiers":["Wikipedia:Sarcolemma"],"termid":"GO:0042383"}


id: PBO:0070844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 23","termid":"PBO:0070844"}


id: PBO:0085614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in DNA replication; component of the Mcm2-7 hexameric helicase complex that binds chromatin as a part of the pre-replicative complex; forms a subcomplex with Mcm4p and Mcm7p","termid":"PBO:0085614"}


id: GO:0099137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of a chimeric, non-reproductive fruiting body in which cells of all genotypes have an equal chance of becoming a spore cell.","definition_xrefs":["PMID:18272966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chimeric non-reproductive fruiting body development","termid":"GO:0099136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"altruistic, chimeric, non-reproductive fruiting body development","synonyms":[{"name":"fully co-operative, chimeric, non-reproductive fruiting body development","type":"exact"}],"termid":"GO:0099137"}


id: PBO:0072323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 9","termid":"PBO:0072323"}


id: PR:Q9HGM4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC543.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGM4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FIT family protein scs3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC543.08","synonyms":[{"name":"Spom972h-SPBC543.08","type":"exact"}],"termid":"PR:Q9HGM4"}


id: MONDO:0011794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Dravet syndrome (DS) is a genetic epilepsy of childhood characterized by a variety of drug-resistant seizures often induced by fever, presenting in previously healthy children, and which frequently leads to cognitive and motor impairment.","definition_xrefs":["Orphanet:33069"],"gene_count":0,"genotype_count":0,"name":"obsolete Dravet syndrome (obsolete MONDO:0011794)","termid":"MONDO:0011794","xrefs":{"Monarch":{"xref_id":"0011794"}}}


id: PATO:0001991
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's disposition to being capable of indefinite growth or division.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viability","termid":"PATO:0000169"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immortal","termid":"PATO:0001991"}


id: PBO:0084134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High affinity, broad selectivity, nucleoside/nucleobase transporter; vacuolar membrane localized transporter which may regulate the balance of nicotinamide riboside (NmR) levels between the cytosol and vacuole, contributing to salvage of NmR for use in cytosolic NAD+ synthesis; equilibrative nucleoside transporter (ENT) family member","termid":"PBO:0084134"}


id: MONDO:0041775
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"iris disorder","termid":"MONDO:0002289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"intraoperative floppy iris syndrome","secondary_identifiers":["MEDGEN:739048","SCTID:418801006","UMLS:C1688637"],"synonyms":[{"name":"intraoperative floppy iris syndrome","type":"exact"}],"termid":"MONDO:0041775","xrefs":{"Monarch":{"xref_id":"0041775"}}}


id: MONDO:0017645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare choreic movement disorder (obsolete MONDO:0017645)","secondary_identifiers":["Orphanet:306715"],"termid":"MONDO:0017645","xrefs":{"Monarch":{"xref_id":"0017645"}}}


id: PBO:0041547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 18 open reading frame 21","termid":"PBO:0041547"}


id: MONDO:0018078
data:
  {"annotated_genes":["SJAG_04755","SJAG_03689","SJAG_04213","SJAG_05313","SJAG_00490","SJAG_01111"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011655"},{"annotations":[84673,84674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012252"},{"annotations":[86813,86812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013224"},{"annotations":[86426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859046"}]},"cv_name":"mondo","definition":"A malignant neoplasm arising from muscle tissue, adipose tissue, blood vessels, fibrous tissue, or other supportive tissues excluding the bones.","definition_xrefs":["NCIT:C9306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoma","termid":"MONDO:0005089"},{"relation_name":"is_a","term_name":"malignant soft tissue neoplasm","termid":"MONDO:0024637"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00490":null,"SJAG_01111":null,"SJAG_03689":null,"SJAG_04213":null,"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"soft tissue sarcoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1642116","UMLS:C4551687","Orphanet:3394","GARD:4898","EFO:1001968","NORD:1953","SCTID:424952003"],"synonyms":[{"name":"connective tissue sarcoma","type":"exact"},{"name":"malignant mesenchymal tumor","type":"exact"},{"name":"malignant mesenchymal tumour","type":"exact"},{"name":"malignant soft tissue tumor","type":"broad"},{"name":"malignant soft tissue tumour","type":"broad"},{"name":"non-Rhabdo. soft tissue sarcoma","type":"exact"},{"name":"sarcoma of soft tissue","type":"exact"},{"name":"sarcoma of the soft tissue","type":"exact"},{"name":"soft part sarcoma","type":"exact"},{"name":"soft tissue sarcoma","type":"exact"}],"termid":"MONDO:0018078","terms_by_termid":{"MONDO:0011655":null,"MONDO:0012252":null,"MONDO:0013224":null,"MONDO:0859046":null},"xrefs":{"Monarch":{"xref_id":"0018078"}}}


id: PBO:0079779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A complex locus","termid":"PBO:0079779"}


id: FYPO:0000486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which reciprocal meiotic recombination begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000293","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of meiotic recombination","synonyms":[{"name":"delayed meiotic recombination","type":"exact"},{"name":"meiotic recombination: delayed","type":"related"}],"termid":"FYPO:0000486"}


id: MONDO:0014954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, periodontitis type","termid":"MONDO:0007527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, periodontal type 2","secondary_identifiers":["GARD:16209","OMIM:617174","MEDGEN:934648","UMLS:C4310681","DOID:0080987"],"synonyms":[{"name":"EDSPD2","type":"related"},{"name":"Ehlers-Danlos syndrome, periodontal type, 2","type":"related"}],"termid":"MONDO:0014954","xrefs":{"Monarch":{"xref_id":"0014954"}}}


id: GO:0031537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chemical reactions and pathways involving anthocyanins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"anthocyanin-containing compound metabolic process","termid":"GO:0046283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of anthocyanin metabolic process","synonyms":[{"name":"regulation of anthocyanin metabolism","type":"exact"}],"termid":"GO:0031537"}


id: PBO:0070284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 25","termid":"PBO:0070284"}


id: MONDO:0957319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pseudohypoaldosteronism, type I (obsolete MONDO:0957319)","termid":"MONDO:0957319","xrefs":{"Monarch":{"xref_id":"0957319"}}}


id: PBO:0040957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 28","termid":"PBO:0040957"}


id: PBO:0090304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperone activator Sti1","termid":"PBO:0090304"}


id: PBO:0000501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human C9orf78 ortholog","termid":"PBO:0000501"}


id: GO:1903551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of extracellular vesicular exosome assembly.","definition_xrefs":["PMID:24105262","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"extracellular exosome assembly","termid":"GO:0071971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of extracellular exosome assembly","synonyms":[{"name":"regulation of extracellular vesicular exosome assembly","type":"exact"}],"termid":"GO:1903551"}


id: MONDO:0015234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arachnodactyly - abnormal ossification - intellectual disability is a multiple congenital developmental anomalies syndrome characterized by arachnodactyly of fingers and toes associated with craniofacial dysmorphism (including abnormal cranial ossification, frontal bossing, flat calvaria, shallow deformed orbits resulting in exophtalmos, midface hypoplasia and micrognathia), feeding difficulties in infancy, infantile muscular hypotonia, and developmental delay leading to intellectual disability.","definition_xrefs":["Orphanet:1129"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachnodactyly-abnormal ossification-intellectual disability syndrome","secondary_identifiers":["MESH:C537024","MEDGEN:419792","SCTID:720501007","UMLS:C2931398","GARD:381"],"synonyms":[{"name":"Kosztolanyi syndrome","type":"exact"},{"name":"arachnodactyly, abnormal ossification and intellectual disability","type":"related"},{"name":"arachnodactyly, abnormal ossification and mental retardation","type":"related"}],"termid":"MONDO:0015234","xrefs":{"Monarch":{"xref_id":"0015234"}}}


id: GO:0051068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dihydrolipoamide, the reduced form of lipoamide, produced as an intermediate in the reactions in which lipoamide acts as a cofactor.","definition_xrefs":["ISBN:0721601464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"dihydrolipoamide metabolic process","synonyms":[{"name":"dihydrolipoamide metabolism","type":"exact"},{"name":"dihydrolipoamide reduction","type":"narrow"},{"name":"dihydrothioctamide metabolic process","type":"exact"},{"name":"dihydrothioctamide metabolism","type":"exact"}],"termid":"GO:0051068"}


id: PBO:0069593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 867, pseudogene","termid":"PBO:0069593"}


id: MONDO:0020397
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Parachute tricuspid valve is a rare congenital heart malformation defined as an insertion of the chordal apparatus into a single papillary muscle or a muscle group, making a pathognomonic 'pear' shape sign in the four-chamber echocardiographic view with the atrium forming the larger base of the pear and the leaflets the apex. Isolated parachute tricuspid valve may be asymptomatic or present with symptoms of tricuspid stenosis (diastolic inspiratory murmur, pulsation of jugular veins, hepatomegaly, edema, epigastric discomfort, right atrial enlargement, right ventricular hypertrophy, electrocardiography abnormalities). It may also be associated with other heart malformations and present with symptoms of the complex of malformations.","definition_xrefs":["Orphanet:99056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital tricuspid malformation","termid":"MONDO:0020289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"parachute tricuspid valve","secondary_identifiers":["GARD:19624","MEDGEN:576478","UMLS:C0344755"],"termid":"MONDO:0020397","xrefs":{"Monarch":{"xref_id":"0020397"}}}


id: RO:0002211
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"process(P1) regulates process(P2) iff: P1 results in the initiation or termination of P2 OR affects the frequency of its initiation or termination OR affects the magnitude or rate of output of P2.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of","termid":"RO:0002411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates","termid":"RO:0002211"}


id: GO:0004470
data:
  {"annotated_genes":["SJAG_02176"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[118004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004471"}]},"cv_name":"molecular_function","definition":"Catalysis of the oxidative decarboxylation of malate with the concomitant production of pyruvate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate dehydrogenase activity","termid":"GO:0016615"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02176":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"malic enzyme activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyruvic-malic carboxylase activity","type":"related"}],"termid":"GO:0004470","terms_by_termid":{"GO:0004471":null}}


id: PBO:0052399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kin17 DNA and RNA binding protein","termid":"PBO:0052399"}


id: MONDO:0008816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arnold-Chiari malformation type II is a rare, central nervous system malformation characterized by caudal displacement of the cerebellum, pons, medulla and fourth ventricle through the foramen magnum into the spinal canal, and is typically associated with myelomeningocele. Variable other central nervous system abnormalities might be present (partial or complete agenesis of the corpus callosum, a small fourth ventricle, obstructive hydrocephalus, falx and tentorium defects, and polygyria). Symptoms include hypotonia, apnea with cyanosis, dysphagia, opisthotonus, nystagmus, spasticity, ataxia, and occipital headache.","definition_xrefs":["Orphanet:1136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Chiari malformation","termid":"MONDO:0000115"},{"relation_name":"is_a","term_name":"spina bifida cystica","termid":"MONDO:0017069"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"Chiari malformation type II","secondary_identifiers":["MEDGEN:108222","GARD:9232","MedDRA:10056945","OMIM:207950","UMLS:C0555206","SCTID:373587001"],"synonyms":[{"name":"Arnold Chiari malformation type II","type":"related"},{"name":"Arnold-Chiari malformation","type":"related"},{"name":"Arnold-Chiari malformation type 2","type":"exact"},{"name":"Arnold-Chiari malformation type II","type":"exact"},{"name":"Chiari malformation type 2","type":"exact"},{"name":"Chiari malformation type II","type":"exact"},{"name":"Chiari type II malformation","type":"related"},{"name":"Cm2","type":"related"}],"termid":"MONDO:0008816","xrefs":{"Monarch":{"xref_id":"0008816"}}}


id: GO:1990246
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A calcium channel complex in the mitochondrial inner membrane capable of highly-selective calcium channel activity. Its components include the EF-hand-containing proteins mitochondrial calcium uptake 1 (MICU1) and MICU2, the pore-forming subunit mitochondrial calcium uniporter (MCU) and its paralog MCUb, and the MCU regulator EMRE.","definition_xrefs":["PMID:24231807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium channel complex","termid":"GO:0034704"},{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005737","GO:0005739","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"uniplex complex","synonyms":[{"name":"mitochondrial uniporter complex","type":"exact"},{"name":"mitochondrial uniporter holocomplex","type":"exact"}],"termid":"GO:1990246"}


id: MONDO:0017565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"macrodactyly of fingers","termid":"MONDO:0017474"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrodactyly of fingers, bilateral","secondary_identifiers":["GARD:21228","icd11.foundation:514958635","UMLS:C5437813","MEDGEN:1730289","Orphanet:295241"],"synonyms":[{"name":"macrodactyly of hand, bilateral","type":"exact"}],"termid":"MONDO:0017565","xrefs":{"Monarch":{"xref_id":"0017565"}}}


id: PBO:0065757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pygopus family PHD finger 2","termid":"PBO:0065757"}


id: PBO:0043636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPG2 imprinted transcript 1","termid":"PBO:0043636"}


id: PBO:0091952
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae SRP54","termid":"PBO:0091952"}


id: PATO:0000213
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000213 neurobehavioral function (obsolete PATO:0000213)","termid":"PATO:0000213"}


id: PBO:0069582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 856, pseudogene","termid":"PBO:0069582"}


id: MONDO:0100568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Mycobacterium tuberculosis, protection against (obsolete MONDO:0100568)","termid":"MONDO:0100568","xrefs":{"Monarch":{"xref_id":"0100568"}}}


id: CHEBI:28187
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-(hydroxymethyl)serine","termid":"CHEBI:28187"}


id: PBO:0059117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monooxygenase DBH like 1","termid":"PBO:0059117"}


id: MONDO:0001008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The abnormal narrowness of the palpebral fissure in the horizontal direction caused by the lateral displacement of the medial canthi of the eyelids. (Dorland, 27th ed)","definition_xrefs":["MESH:D016569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eyelid disorder","termid":"MONDO:0003382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"blepharophimosis","secondary_identifiers":["MEDGEN:2670","ICD9:374.46","UMLS:C0005744","DOID:10348","HP:0000581"],"synonyms":[{"name":"blepharophimosis","type":"exact"},{"name":"blepharophimosis (disease)","type":"exact"}],"termid":"MONDO:0001008","xrefs":{"Monarch":{"xref_id":"0001008"}}}


id: PBO:0044469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 7 subfamily B member 1","termid":"PBO:0044469"}


id: MONDO:0019900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 12","termid":"MONDO:0016877"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-distal monosomy 12q","secondary_identifiers":["GARD:19330","Orphanet:96160","UMLS:C5190525","MEDGEN:1679764"],"synonyms":[{"name":"non-distal deletion 12q","type":"exact"},{"name":"non-distal monosomy type 12q","type":"exact"},{"name":"non-telomeric monosomy 12q","type":"exact"}],"termid":"MONDO:0019900","xrefs":{"Monarch":{"xref_id":"0019900"}}}


id: PBO:0029162
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_nitrogen_starvation","termid":"PBO:0029162"}


id: FYPO:0005399
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break repair via homologous recombination does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination","termid":"FYPO:0000063"},{"relation_name":"is_a","term_name":"abolished double-strand break repair","termid":"FYPO:0005436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000298","FYPO:0000293","FYPO:0001985"],"is_obsolete":false,"name":"abolished double-strand break repair via homologous recombination","synonyms":[{"name":"abolished double-strand break repair via homologous recombination during mitotic cell cycle","type":"related"},{"name":"abolished double-strand break repair via homologous recombination during vegetative growth","type":"exact"},{"name":"double-strand break repair via homologous recombination abolished","type":"exact"}],"termid":"FYPO:0005399"}


id: FYPO:0004067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the serine residue at position 2 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","GO:0071619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"},{"relation_name":"is_a","term_name":"abnormal RNA polymerase II C-terminal domain phosphorylation","termid":"FYPO:0007410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0002494","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during vegetative growth","synonyms":[{"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during mitotic cell cycle","type":"related"},{"name":"decreased phosphorylation of RNA polymerase II CTD serine 2 residues during vegetative growth","type":"exact"},{"name":"reduced phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during vegetative growth","type":"exact"}],"termid":"FYPO:0004067"}


id: GO:0030132
data:
  {"annotated_genes":["SJAG_02805","SJAG_01167","SJAG_00800","SJAG_00104"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[107816,111141,95752,111082],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"}]},"cv_name":"cellular_component","definition":"The coat found on coated pits and the coated vesicles derived from coated pits; comprises clathrin and the AP-2 adaptor complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin coat","termid":"GO:0030118"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"clathrin-coated pit","termid":"GO:0005905"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_02805":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"clathrin coat of coated pit","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030132","terms_by_termid":{"GO:0030122":null}}


id: PBO:0031026
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_concentration_of_M-factor_in_growth_medium","termid":"PBO:0031026"}


id: PBO:0081331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 132","termid":"PBO:0081331"}


id: PBO:0056729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesoderm posterior bHLH transcription factor 2","termid":"PBO:0056729"}


id: PBO:0053956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1262","termid":"PBO:0053956"}


id: PBO:0028018
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_CAAX-protein_geranylgeranyltransferase_activity","termid":"PBO:0028018"}


