# terms

id: PATO:0001686
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A magnetic quality inhering in a bearer by virtue of the bearer's inability to exert magnitism.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"magnetism","termid":"PATO:0001682"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-magnetic","termid":"PATO:0001686"}


id: PATO:0000387
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A hardness quality of giving little resistance to pressure.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"hardness","termid":"PATO:0000048"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"soft","termid":"PATO:0000387"}


id: GO:0003052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism modulates its blood pressure at different values with a regularity of approximately 24 hours.","definition_xrefs":["GOC:mtg_cardio","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure","termid":"GO:0003073"},{"relation_name":"is_a","term_name":"circadian rhythm","termid":"GO:0007623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian regulation of systemic arterial blood pressure","termid":"GO:0003052"}


id: MONDO:0100476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing acquired partial lipodystrophy.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipodystrophy, partial, acquired, susceptibility to","secondary_identifiers":["UMLS:C3887501","MEDGEN:854363","OMIM:608709"],"synonyms":[{"name":"APLD, susceptibility to","type":"exact"},{"name":"barraquer-simons syndrome","type":"exact"},{"name":"lipodystrophy, cephalothoracic type","type":"exact"},{"name":"lipodystrophy, partial, acquired, susceptibility","type":"exact"},{"name":"lipodystrophy, partial, progressive","type":"exact"}],"termid":"MONDO:0100476","xrefs":{"Monarch":{"xref_id":"0100476"}}}


id: PATO:0001745
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A radiation exposure quality inhering in a substance by virtue of the radiation energy \\\"deposited\\\" in a kilogram of a substance.","definition_xrefs":["arpansa:arpansa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation exposure","termid":"PATO:0001744"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiation absorbed dose","termid":"PATO:0001745"}


id: PR:O42843
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23A1.05 gene.","definition_xrefs":["UniProtKB:O42843","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C23A1.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23A1.05","synonyms":[{"name":"Spom972h-SPAC23A1.05","type":"exact"}],"termid":"PR:O42843"}


id: PATO:0002035
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being on the same side in relation to another structure.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ipsilateral to","synonyms":[{"name":"ipsilateral","type":"exact"}],"termid":"PATO:0002035"}


id: PBO:0067691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal N3","termid":"PBO:0067691"}


id: MONDO:0012339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any celiac disease in which the cause of the disease is a mutation in the MYO9B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"celiac disease, susceptibility to, 4","secondary_identifiers":["MEDGEN:346679","OMIM:609753","UMLS:C1857847"],"synonyms":[{"name":"CELIAC4","type":"related"},{"name":"MYO9B celiac disease","type":"exact"},{"name":"MYO9B coeliac disease","type":"exact"},{"name":"celiac disease caused by mutation in MYO9B","type":"exact"},{"name":"celiac disease, susceptibility to, 4","type":"exact"},{"name":"celiac disease, susceptibility to, type 4","type":"exact"},{"name":"coeliac disease caused by mutation in MYO9B","type":"exact"},{"name":"coeliac disease, susceptibility to, type 4","type":"exact"},{"name":"gluten-sensitive enteropathy, susceptibility to, 4","type":"related"},{"name":"susceptibility to celiac disease 4","type":"related"},{"name":"susceptibility to coeliac disease 4","type":"related"}],"termid":"MONDO:0012339","xrefs":{"Monarch":{"xref_id":"0012339"}}}


id: GO:0032234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the directed movement of calcium ions via a store-operated calcium channel.","definition_xrefs":["PMID:16582901","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of calcium ion transport via store-operated calcium channel activity (obsolete GO:0032234)","synonyms":[{"name":"regulation of calcium ion transport via store-operated calcium channel activity","type":"exact"},{"name":"regulation of calcium transport via store-operated calcium channel","type":"exact"},{"name":"regulation of store-operated calcium channel activity","type":"exact"}],"termid":"GO:0032234"}


id: MONDO:0007932
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An age related macular degeneration conferred by variation in the ABCA4 gene on chromosome 1p22.","definition_xrefs":["DOID:0110015","PMID:10396622"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age-related macular degeneration","termid":"MONDO:0005150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"age related macular degeneration 2","secondary_identifiers":["MESH:C562479","OMIM:153800","MEDGEN:501183","UMLS:C3495438"],"synonyms":[{"name":"ARMD2","type":"exact"},{"name":"age related macular degeneration type 2","type":"exact"},{"name":"macular Degeneration, Senile","type":"related"},{"name":"macular Degeneration, age-related, type 2","type":"exact"},{"name":"macular degeneration, age-related, 2","type":"related"},{"name":"maculopathy, age-related, 2","type":"related"}],"termid":"MONDO:0007932","xrefs":{"Monarch":{"xref_id":"0007932"}}}


id: GO:0048258
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + 3-dehydro-alpha-D-glucose = NADPH + alpha-D-glucose.","definition_xrefs":["MetaCyc:KETOGLUCOSE-REDUCTASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-ketoglucose-reductase activity","termid":"GO:0048258"}


id: PBO:0069628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 905, pseudogene","termid":"PBO:0069628"}


id: PBO:0050866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of DNA binding 3","termid":"PBO:0050866"}


id: PBO:0041531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C16orf95 divergent transcript","termid":"PBO:0041531"}


id: PBO:0012243
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains FLEX elelment","termid":"PBO:0012243"}


id: MONDO:0022873
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corpus callosum dysgenesis cleft spasm","termid":"MONDO:0022873","xrefs":{"Monarch":{"xref_id":"0022873"}}}


id: GO:0001899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of cytolysis by that organism of cells in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:add","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cytolysis by symbiont of host cells (obsolete GO:0001899)","synonyms":[{"name":"down regulation by symbiont of cytolysis of host cells","type":"exact"},{"name":"down-regulation by symbiont of cytolysis of host cells","type":"exact"},{"name":"downregulation by symbiont of cytolysis of host cells","type":"exact"},{"name":"inhibition by symbiont of cytolysis of host cells","type":"narrow"},{"name":"negative regulation by symbiont of cytolysis of host cells","type":"exact"}],"termid":"GO:0001899"}


id: GO:0036292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which interchain hydrogen bonds between two single-stranded DNA (ssDNA) are reformed to regenerate double-stranded DNA (dsDNA). ssDNA is often bound and stabilized by proteins such as replication protein A (RPA) to form ssDNA bubbles. The bubbles can be rewound by ATP-dependent motors to reform base pairs between strands and thus dsDNA.","definition_xrefs":["PMID:22704558","PMID:22705370","PMID:21078962","PMID:22759634"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA rewinding (obsolete GO:0036292)","synonyms":[{"name":"DNA annealing","type":"related"},{"name":"RPA-dependent DNA rewinding","type":"narrow"},{"name":"single-stranded DNA bubble rewinding","type":"narrow"}],"termid":"GO:0036292"}


id: PBO:0058268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4646","termid":"PBO:0058268"}


id: PBO:0029845
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_acetylation","termid":"PBO:0029845"}


id: MONDO:0003205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the renal pelvis","direct_ancestors":[{"relation_name":"is_a","term_name":"renal cell carcinoma","termid":"MONDO:0005086"},{"relation_name":"is_a","term_name":"renal pelvis carcinoma","termid":"MONDO:0005519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"renal pelvis adenocarcinoma","secondary_identifiers":["UMLS:C1335748","MEDGEN:277590","NCIT:C6143","DOID:4918"],"synonyms":[{"name":"adenocarcinoma of kidney pelvis","type":"exact"},{"name":"adenocarcinoma of renal pelvis","type":"exact"},{"name":"adenocarcinoma of the kidney pelvis","type":"exact"},{"name":"adenocarcinoma of the renal pelvis","type":"exact"},{"name":"kidney pelvis adenocarcinoma","type":"exact"},{"name":"kidney renal pelvis adenocarcinoma","type":"exact"},{"name":"renal pelvis adenocarcinoma","type":"exact"}],"termid":"MONDO:0003205","xrefs":{"Monarch":{"xref_id":"0003205"}}}


id: PBO:0087978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNAHis guanylyltransferase; adds a guanosine residue to the 5' end of tRNAH is after transcription and RNase P cleavage; can also catalyze reverse (3'-5') polymerization with certain substrates in a template-dependent reaction; couples nuclear division and migration to cell budding and cytokinesis; essential enzyme conserved among eukaryotes","termid":"PBO:0087978"}


id: MONDO:0008553
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant condition caused by mutation(s) in the GFI1B gene, encoding zinc finger protein Gfi-1b. It is characterized by a tendency for increased bleeding due to abnormal platelet function.","definition_xrefs":["NCIT:C142084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"platelet-type bleeding disorder 17","secondary_identifiers":["OMIM:187900","MEDGEN:396078","DOID:0111049","GARD:15117","MESH:C566060","UMLS:C1861194"],"synonyms":[{"name":"BDPLT17","type":"exact"},{"name":"GFI1B inherited bleeding disorder, platelet-type","type":"exact"},{"name":"bleeding disorder, platelet-type 17","type":"exact"},{"name":"bleeding disorder, platelet-type, 17","type":"related"},{"name":"hereditary thrombasthenia-thrombocytopenia","type":"exact"},{"name":"inherited bleeding disorder, platelet-type caused by mutation in GFI1B","type":"exact"},{"name":"platelet-type bleeding disorder 17","type":"exact"},{"name":"thrombasthenia-thrombocytopenia, hereditary","type":"related"}],"termid":"MONDO:0008553","xrefs":{"Monarch":{"xref_id":"0008553"}}}


id: PBO:0051755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interaction protein for cytohesin exchange factors 1","termid":"PBO:0051755"}


id: FYPO:0001476
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of guanosine-diphosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abnormal guanosine-diphosphatase activity","synonyms":[{"name":"abnormal GDPase activity","type":"exact"}],"termid":"FYPO:0001476"}


id: PBO:0075496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 41","termid":"PBO:0075496"}


id: MONDO:0600027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Serious heritable structural anomalies of the right side of the heart, including pulmonary atresia, tricuspid valve disease and Ebstein's anomaly, and right ventricular outflow tract obstruction and/or pulmonary stenosis, that are present from birth.","definition_xrefs":["EFO:0600032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital right-sided heart lesions","termid":"MONDO:0600027","xrefs":{"Monarch":{"xref_id":"0600027"}}}


id: FYPO:0005295
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype which the occurrence of an RNA catabolic process is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA catabolic process","termid":"FYPO:0003552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA catabolic process during nitrogen starvation","synonyms":[{"name":"decreased RNA breakdown during nitrogen starvation","type":"exact"},{"name":"decreased RNA catabolic process during nitrogen deprivation","type":"exact"},{"name":"decreased RNA catabolism during nitrogen depletion","type":"exact"},{"name":"decreased RNA degradation during nitrogen starvation","type":"exact"},{"name":"reduced RNA catabolic process during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005295"}


id: PBO:0088877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper-binding protein of the mitochondrial inner membrane Cmc2","termid":"PBO:0088877"}


id: GO:0002125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Aggressive behavior of a female to protect her offspring from a threat.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aggressive behavior","termid":"GO:0002118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maternal aggressive behavior","synonyms":[{"name":"maternal aggression","type":"exact"}],"termid":"GO:0002125"}


id: FYPO:0006368
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled over a normal (i.e. indistinguishable from wild type) portion of the centromeric region of the chromosome.","definition_xrefs":["PMID:29214404","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin organization","termid":"FYPO:0007940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal spatial extent of centromeric heterochromatin assembly","synonyms":[{"name":"normal spatial extent of centromeric heterochromatin assembly during mitotic cell cycle","type":"related"},{"name":"normal spatial extent of centromeric heterochromatin assembly during vegetative growth","type":"exact"},{"name":"normal spatial extent of centromeric heterochromatin formation","type":"exact"}],"termid":"FYPO:0006368"}


id: PBO:0028471
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_cytochrome_absorption_spectrum","termid":"PBO:0028471"}


id: MONDO:1012011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"renal amyloidosis, non-human animal","termid":"MONDO:1011903"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal amyloidosis, cattle","secondary_identifiers":["OMIA:000040-9913"],"termid":"MONDO:1012011","xrefs":{"Monarch":{"xref_id":"1012011"}}}


id: PBO:0081460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 329","termid":"PBO:0081460"}


id: PBO:0044713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDX11 antisense RNA 1","termid":"PBO:0044713"}


id: PBO:0088912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VIa","termid":"PBO:0088912"}


id: MONDO:1012773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cystinuria that occurs in cats due to a mutation in the SLC7A9 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystinuria, non-human animal","termid":"MONDO:1012968"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystinuria, SLC7A9-related, domestic cat","secondary_identifiers":["OMIA:002023-9685"],"synonyms":[{"name":"cystinuria, type B, domestic cat","type":"related"}],"termid":"MONDO:1012773","xrefs":{"Monarch":{"xref_id":"1012773"}}}


id: GO:0007080
data:
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id: PBO:0082843
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle protein; involved in vesicle formation and incorporation of specific secretory cargo; required for the delivery of bud-site selection protein Axl2p and Nha1p antiporter to cell surface; related to Drosophila cornichon; ERV14 has a paralog, ERV15, that arose from the whole genome duplication","termid":"PBO:0082843"}


id: FYPO:0000487
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of reciprocal meiotic recombination is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased meiotic recombination","synonyms":[{"name":"meiotic recombination: increased","type":"related"}],"termid":"FYPO:0000487"}


id: MONDO:0002789
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A term that refers to vascular neoplasms with a prominent hemangiopericytic growth pattern.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pericytic neoplasm","termid":"MONDO:0002604"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemangiopericytic tumor","secondary_identifiers":["DOID:3850","MEDGEN:99196","NCIT:C7076","UMLS:C0476144"],"synonyms":[{"name":"hemangiopericytic neoplasm","type":"exact"}],"termid":"MONDO:0002789","xrefs":{"Monarch":{"xref_id":"0002789"}}}


id: FYECO:0000045
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  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which pentadecanoic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ pentadecanoic acid","termid":"FYECO:0000045"}


id: GO:1903583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of basophil degranulation.","definition_xrefs":["GOC:TermGenie","PMID:10880837","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte mediated immunity","termid":"GO:0002888"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte degranulation","termid":"GO:0043302"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"is_a","term_name":"regulation of basophil degranulation","termid":"GO:1903581"},{"relation_name":"positively_regulates","term_name":"basophil degranulation","termid":"GO:0002561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"positive regulation of basophil degranulation","synonyms":[{"name":"activation of basophil degranulation","type":"narrow"},{"name":"up regulation of basophil degranulation","type":"exact"},{"name":"up-regulation of basophil degranulation","type":"exact"},{"name":"upregulation of basophil degranulation","type":"exact"}],"termid":"GO:1903583"}


id: FYPO:0004253
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a nuclease activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal nuclease activity","termid":"FYPO:0003163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"decreased nuclease activity","synonyms":[{"name":"reduced nuclease activity","type":"exact"}],"termid":"FYPO:0004253"}


id: PBO:0011504
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase, mitochondrial ribosomal protein subunit (predicted)","termid":"PBO:0011504"}


id: GO:0062002
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency or rate of all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity.","definition_xrefs":["PMID:23407971"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity (obsolete GO:0062002)","termid":"GO:0062002"}


id: GO:1905256
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of RNA binding transcription factor activity.","definition_xrefs":["GOC:bf","GO_REF:0000059","GOC:PARL","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of RNA binding transcription factor activity (obsolete GO:1905256)","synonyms":[{"name":"down regulation of RNA binding transcription factor activity","type":"exact"},{"name":"down-regulation of RNA binding transcription factor activity","type":"exact"},{"name":"downregulation of RNA binding transcription factor activity","type":"exact"},{"name":"inhibition of RNA binding transcription factor activity","type":"narrow"}],"termid":"GO:1905256"}


id: FYPO:0003688
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleolus is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during vegetative growth","termid":"FYPO:0001424"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleolus","termid":"FYPO:0003687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to nucleolus","synonyms":[{"name":"abolished protein localisation to nucleolus","type":"exact"},{"name":"abolished protein localization in nucleolus","type":"exact"},{"name":"abolished protein localization to nucleolus during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to nucleolus during vegetative growth","type":"exact"},{"name":"protein localization to nucleolus abolished","type":"exact"}],"termid":"FYPO:0003688"}


id: PBO:0064686
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 22","termid":"PBO:0064686"}


id: PBO:0047353
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 6","termid":"PBO:0047353"}


id: PBO:0078753
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 44 homolog","termid":"PBO:0078753"}


id: PBO:0070186
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 104 pseudogene","termid":"PBO:0070186"}


id: PBO:0029750
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_palmitoylation","termid":"PBO:0029750"}


id: GO:0006767
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  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chemical reactions and pathways involving any of a diverse group of vitamins that are soluble in water.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin metabolic 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id: MONDO:0002321
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  {"annotated_genes":["SJAG_04178","SJAG_02016","SJAG_02305","SJAG_00773","SJAG_02119"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013584"},{"annotations":[86431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008086"},{"annotations":[86524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013337"},{"annotations":[84566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024309"},{"annotations":[85301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013634"},{"annotations":[86663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010378"}]},"cv_name":"mondo","definition":"Inflammation or degeneration of the sensory nerves.","definition_xrefs":["NCIT:C3501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy","termid":"MONDO:0005244"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00773":null,"SJAG_02016":null,"SJAG_02119":null,"SJAG_02305":null,"SJAG_04178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"sensory peripheral neuropathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:356.2","ICD9:356.9","UMLS:C0151313","MEDGEN:101791","SCTID:95662005","DOID:2491"],"synonyms":[{"name":"peripheral neuropathy of sensory nerve","type":"exact"},{"name":"peripheral sensory neuropathy","type":"exact"},{"name":"sensory nerve peripheral neuropathy","type":"exact"},{"name":"sensory neuropathy","type":"exact"}],"termid":"MONDO:0002321","terms_by_termid":{"MONDO:0008086":null,"MONDO:0010378":null,"MONDO:0013337":null,"MONDO:0013584":null,"MONDO:0013634":null,"MONDO:0024309":null},"xrefs":{"Monarch":{"xref_id":"0002321"}}}


id: MONDO:0009571
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Meckel syndrome in which the cause of the disease is a mutation in the MKS1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Meckel syndrome","termid":"MONDO:0018921"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meckel syndrome, type 1","secondary_identifiers":["OMIM:249000","DOID:0070115","UMLS:C3714506","MEDGEN:811346","MESH:C536133"],"synonyms":[{"name":"Dysencephalia Splanchnocystica","type":"related"},{"name":"Dysencephalia splachnocystica","type":"related"},{"name":"Gruber syndrome","type":"related"},{"name":"MKS","type":"related"},{"name":"MKS1","type":"exact"},{"name":"MKS1 Meckel syndrome","type":"exact"},{"name":"Meckel Gruber syndrome","type":"related"},{"name":"Meckel syndrome","type":"related"},{"name":"Meckel syndrome 1","type":"related"},{"name":"Meckel syndrome caused by mutation in MKS1","type":"exact"},{"name":"Meckel syndrome type1","type":"related"},{"name":"Meckel syndrome, type 1","type":"exact"},{"name":"Meckel-Gruber syndrome","type":"related"},{"name":"Meckel-Gruber syndrome, type 1","type":"exact"},{"name":"Mes","type":"related"}],"termid":"MONDO:0009571","xrefs":{"Monarch":{"xref_id":"0009571"}}}


id: MONDO:0006708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the family Desulfovibrionaceae.","definition_xrefs":["MESH:D045824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gram-negative bacterial infections","termid":"MONDO:0021678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Desulfovibrionaceae infectious disease","synonyms":[{"name":"Bilophila infection","type":"related"},{"name":"Bilophila infections","type":"related"},{"name":"Desulfovibrio infection","type":"related"},{"name":"Desulfovibrio infections","type":"related"},{"name":"Desulfovibrionaceae caused disease or disorder","type":"exact"},{"name":"Desulfovibrionaceae disease or disorder","type":"exact"},{"name":"Desulfovibrionaceae infection","type":"related"},{"name":"Lawsonia infection","type":"related"},{"name":"Lawsonia infections","type":"related"},{"name":"commensal Bilophila infection","type":"related"},{"name":"infection, Bilophila","type":"related"},{"name":"infection, Desulfovibrio","type":"related"},{"name":"infection, Desulfovibrionaceae","type":"related"},{"name":"infection, Lawsonia","type":"related"},{"name":"infections, Bilophila","type":"related"},{"name":"infections, Desulfovibrio","type":"related"},{"name":"infections, Desulfovibrionaceae","type":"related"},{"name":"infections, Lawsonia","type":"related"}],"termid":"MONDO:0006708","xrefs":{"Monarch":{"xref_id":"0006708"}}}


id: GO:0097626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-arginine from one side of a membrane to the other. In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.","definition_xrefs":["PMID:8195186","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-arginine transmembrane transporter activity","termid":"GO:0061459"},{"relation_name":"is_a","term_name":"low-affinity basic amino acid transmembrane transporter activity","termid":"GO:0097625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"low-affinity L-arginine transmembrane transporter activity","synonyms":[{"name":"low affinity L-arginine transmembrane transporter activity","type":"exact"}],"termid":"GO:0097626"}


id: FYPO:0002276
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of protein degradation is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased protein level","termid":"FYPO:0000835"},{"relation_name":"is_a","term_name":"abnormal protein degradation","termid":"FYPO:0002275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"increased protein degradation","synonyms":[{"name":"increased protein breakdown","type":"exact"},{"name":"increased protein catabolic process","type":"exact"},{"name":"increased protein catabolism","type":"exact"}],"termid":"FYPO:0002276"}


id: PBO:0054485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1885","termid":"PBO:0054485"}


id: GO:0002891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of an immunoglobulin mediated immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of B cell mediated immunity","termid":"GO:0002714"},{"relation_name":"is_a","term_name":"regulation of immunoglobulin mediated immune response","termid":"GO:0002889"},{"relation_name":"positively_regulates","term_name":"immunoglobulin mediated immune response","termid":"GO:0016064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of immunoglobulin mediated immune response","synonyms":[{"name":"activation of immunoglobulin mediated immune response","type":"narrow"},{"name":"stimulation of immunoglobulin mediated immune response","type":"narrow"},{"name":"up regulation of immunoglobulin mediated immune response","type":"exact"},{"name":"up-regulation of immunoglobulin mediated immune response","type":"exact"},{"name":"upregulation of immunoglobulin mediated immune response","type":"exact"}],"termid":"GO:0002891"}


id: PBO:0078003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAF3 interacting protein 3","termid":"PBO:0078003"}


id: PR:P78753
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An asparagine synthetase [glutamine-hydrolyzing] that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02567","PANTHER:PTHR11772:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine synthetase [glutamine-hydrolyzing] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.10","secondary_identifiers":["UniProtKB:P78753"],"synonyms":[{"name":"Spom972h-ASNS","type":"exact"},{"name":"glutamine-dependent asparagine synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78753"}


id: PR:Q9P3W4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dli1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3W4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein intermediate light chain dil1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC458.04c","synonyms":[{"name":"Spom972h-dli1","type":"exact"}],"termid":"PR:Q9P3W4"}


id: GO:0097362
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A hexameric protein complex composed of MCM8 and MCM9 and involved in homologous recombination repair following DNA interstrand cross-links.","definition_xrefs":["PMID:22771115","GOC:sp","PMID:22771120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MCM complex","termid":"GO:0042555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MCM8-MCM9 complex","termid":"GO:0097362"}


id: GO:0052223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a lower concentration of a specific chemical on, within or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative chemotaxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052223)","synonyms":[{"name":"negative chemotaxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"negative chemotaxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052223"}


id: PBO:0088900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein, involved in mitochondrial gene expression","termid":"PBO:0088900"}


id: MONDO:0016082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tracheo-esophageal fistula-hypospadias syndrome (obsolete MONDO:0016082)","secondary_identifiers":["Orphanet:2042"],"termid":"MONDO:0016082","xrefs":{"Monarch":{"xref_id":"0016082"}}}


id: PBO:0042327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD47 molecule","termid":"PBO:0042327"}


id: PATO:0001262
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of red hue and high brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"red","termid":"PATO:0000322"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light red","termid":"PATO:0001262"}


id: PBO:0059081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyl-oligosaccharide glucosidase","termid":"PBO:0059081"}


id: PBO:0045359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPEP2 neighbor","termid":"PBO:0045359"}


id: PBO:0046914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 30 member A","termid":"PBO:0046914"}


id: MONDO:0017463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pseudoarthrosis of the limbs","termid":"MONDO:0015525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"congenital pseudoarthrosis of the femur","secondary_identifiers":["GARD:21204","MEDGEN:1843312","Orphanet:295020","UMLS:C5679939"],"synonyms":[{"name":"congenital pseudarthrosis of the femur","type":"exact"}],"termid":"MONDO:0017463","xrefs":{"Monarch":{"xref_id":"0017463"}}}


id: PBO:0041958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle and apoptosis regulator 2","termid":"PBO:0041958"}


id: PBO:0044277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine receptor 1","termid":"PBO:0044277"}


id: PBO:0079926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upregulator of cell proliferation","termid":"PBO:0079926"}


id: PBO:0085838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; YBR197C is not an essential gene; relative distribution to the nucleus increases upon DNA replication stress; YBR197C has a paralog, YPL077C, that arose from the whole genome duplication","termid":"PBO:0085838"}


id: GO:0061017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a hepatoblast. A hepatoblast is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into hepatocytes and cholangiocytes.","definition_xrefs":["GOC:dph","PMID:15226394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"is_a","term_name":"stem cell differentiation","termid":"GO:0048863"},{"relation_name":"part_of","term_name":"liver development","termid":"GO:0001889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatoblast differentiation","termid":"GO:0061017"}


id: PBO:0067509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 649, pseudogene","termid":"PBO:0067509"}


id: GO:0052524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of the salicylic acid-mediated defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of symbiont salicylic acid-mediated defense response (obsolete GO:0052524)","synonyms":[{"name":"induction by organism of symbiont SA-mediated defense response","type":"narrow"},{"name":"induction by organism of symbiont salicylic acid-mediated defense response","type":"narrow"},{"name":"positive regulation by organism of symbiont SA-mediated defense response","type":"exact"},{"name":"positive regulation by organism of symbiont salicylic acid-mediated defense response","type":"exact"}],"termid":"GO:0052524"}


id: GO:2001042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the process of physically separating the septal cell wall material by enzymatic digestion, that occurs after daughter cells are separated by cytokinesis.","definition_xrefs":["GOC:obol","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of septum digestion after cytokinesis","termid":"GO:0010590"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"negatively_regulates","term_name":"septum digestion after cytokinesis","termid":"GO:0000920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of septum digestion after cytokinesis","synonyms":[{"name":"negative regulation of cytokinetic cell separation","type":"exact"}],"termid":"GO:2001042"}


id: GO:0047080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxyuridine + 2-oxoglutarate + O2 = CO2 + succinate + uridine.","definition_xrefs":["EC:1.14.11.3","RHEA:21076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"deoxyuridine 2'-dioxygenase activity","secondary_identifiers":["MetaCyc:1.14.11.3-RXN","KEGG_REACTION:R01879"],"synonyms":[{"name":"2'-deoxyuridine,2-oxoglutarate:oxygen oxidoreductase (2'-hydroxylating)","type":"related"},{"name":"deoxyuridine 2'-hydroxylase activity","type":"related"},{"name":"pyrimidine deoxyribonucleoside 2'-hydroxylase activity","type":"broad"},{"name":"pyrimidine-deoxynucleoside 2'-dioxygenase activity","type":"broad"},{"name":"pyrimidine-deoxynucleoside,2-oxoglutarate 2'-dioxygenase activity","type":"broad"},{"name":"thymidine 2'-dioxygenase activity","type":"narrow"},{"name":"thymidine 2'-hydroxylase activity","type":"related"},{"name":"thymidine 2-oxoglutarate dioxygenase activity","type":"related"},{"name":"thymidine dioxygenase activity","type":"related"}],"termid":"GO:0047080"}


id: PBO:0054655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2060","termid":"PBO:0054655"}


id: PATO:0000988
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000988 relative consistency value (obsolete PATO:0000988)","termid":"PATO:0000988"}


id: MONDO:0018670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"fragile X syndrome","termid":"MONDO:0010383"},{"relation_name":"is_a","term_name":"premature ovarian failure 1","termid":"MONDO:0010706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"symptomatic form of fragile X syndrome in female carrier","secondary_identifiers":["GARD:17783","Orphanet:449291","MEDGEN:1814467","UMLS:C5681104"],"termid":"MONDO:0018670","xrefs":{"Monarch":{"xref_id":"0018670"}}}


id: GO:0035397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Positive regulation of an adaptive immune response mediated via cytokine production by helper T cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"helper T cell enhancement of adaptive immune response","synonyms":[{"name":"provision of T cell help","type":"exact"}],"termid":"GO:0035397"}


id: GO:0098773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the skin epidermis over time, from its formation to the mature structure.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermis development","termid":"GO:0008544"},{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"skin development","termid":"GO:0043588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skin epidermis development","termid":"GO:0098773"}


id: MONDO:0015453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cogan syndrome (CS) is a rare autoimmune disorder of unknown origin characterized by inflammatory ocular disease (mainly interstitial keratitis) and vestibulo-auditory manifestations (mainly acute onset hearing loss, tinnitus and vertigo), in the setting of a negative work-up for syphilis, with a variable risk of developing into a systemic disease. Systemic manifestations may occur in more than 70% of cases.","definition_xrefs":["Orphanet:1467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease of ear, nose and throat","termid":"MONDO:0000587"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005328"],"is_obsolete":false,"name":"Cogan syndrome","secondary_identifiers":["MEDGEN:82871","MedDRA:10056667","SCTID:405810005","icd11.foundation:2098089327","MESH:D055952","DOID:0060216","UMLS:C0271270","GARD:1421"],"synonyms":[{"name":"Cogan syndrome","type":"exact"},{"name":"Cogan's syndrome","type":"exact"},{"name":"diffuse interstitual keratitis","type":"exact"}],"termid":"MONDO:0015453","xrefs":{"Monarch":{"xref_id":"0015453"}}}


id: SO:0001266
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene encoding a small noncoding RNA that is generally found only in the cytoplasm.","direct_ancestors":[{"relation_name":"has_quality","term_name":"scRNA_encoding","termid":"SO:0000575"},{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scRNA_gene","synonyms":[{"name":"scRNA gene","type":"exact"}],"termid":"SO:0001266"}


id: PBO:0053798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1053","termid":"PBO:0053798"}


id: PBO:0026967
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_horsetail_movement","termid":"PBO:0026967"}


id: PATO:0002385
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being marked by narrow lines, usually parallel, with at least one salient angle on the margin","definition_xrefs":["FNA:FNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated","termid":"PATO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striate-angular","termid":"PATO:0002385"}


id: PBO:0050252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 30","termid":"PBO:0050252"}


id: PBO:0030216
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-alpha,alpha-trehalase_activity_increase_abolished_during_cellular_response_to_heat","termid":"PBO:0030216"}


id: GO:0033142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nuclear progesterone receptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor binding","termid":"GO:0016922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"nuclear progesterone receptor binding","synonyms":[{"name":"progesterone receptor binding","type":"broad"}],"termid":"GO:0033142"}


id: MONDO:1011307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosomal disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosomal disorder, non-human animal","termid":"MONDO:1011307","xrefs":{"Monarch":{"xref_id":"1011307"}}}


id: PBO:0035931
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-bent_cell_during_G0_to_G1_transition","termid":"PBO:0035931"}


id: FYPO:0007447
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which autophagic degradation of the endoplasmic reticulum does not occur during a cellular response to endoplasmic reticulum stress.","definition_xrefs":["PMID:32735772","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished macroautophagy","termid":"FYPO:0000380"},{"relation_name":"is_a","term_name":"abnormal reticulophagy during vegetative growth","termid":"FYPO:0007445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished reticulophagy during cellular response to endoplasmic reticulum stress","synonyms":[{"name":"abolished ER autophagy during cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"abolished ER degradation","type":"related"},{"name":"abolished ER-phagy during cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"abolished endoplasmic reticulum autophagy during cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"abolished reticulophagy during cellular response to ER stress","type":"exact"},{"name":"abolished reticulophagy during cellular response to endoplasmic reticulum stress during mitotic cell cycle","type":"related"},{"name":"abolished reticulophagy during cellular response to endoplasmic reticulum stress during vegetative growth","type":"exact"},{"name":"reticulophagy abolished during cellular response to endoplasmic reticulum stress","type":"exact"}],"termid":"FYPO:0007447"}


id: GO:0061074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of neural retina development, the progression of the neural retina over time from its initial formation to the mature structure. The neural retina is the part of the retina that contains neurons and photoreceptor cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"neural retina development","termid":"GO:0003407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neural retina development","termid":"GO:0061074"}


id: GO:0075199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of symbiont haustorium neck formation for entry into host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"modulation of symbiont haustorium neck formation for entry into host","termid":"GO:0075198"},{"relation_name":"is_a","term_name":"positive regulation by symbiont of entry into host","termid":"GO:0075294"},{"relation_name":"positively_regulates","term_name":"haustorium neck formation","termid":"GO:0075197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of symbiont haustorium neck formation for entry into host","termid":"GO:0075199"}


id: PBO:0080095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UST antisense RNA 1","termid":"PBO:0080095"}


id: PBO:0000538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lon protease homolog Lon1 (predicted)","termid":"PBO:0000538"}


id: CHEBI:18385
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine(1+)","termid":"CHEBI:18385"}


id: GO:0030694
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The central portion of the bacterial-type flagellar basal body, which spans the periplasm and threads through the rings.","definition_xrefs":["GOC:mtg_sensu","PMID:10572114","PMID:11133968","PMID:12624192","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum basal body","termid":"GO:0009425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum basal body, rod","synonyms":[{"name":"flagellar basal body, rod","type":"exact"},{"name":"flagellin-based flagellum basal body, rod","type":"exact"}],"termid":"GO:0030694"}


id: FYPO:0002274
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118989,118997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002678"},{"annotations":[118996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002033"},{"annotations":[118912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005957"},{"annotations":[118992,118988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001838"},{"annotations":[119038],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003727"},{"annotations":[118985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002680"},{"annotations":[118982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001038"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a protein metabolic process is abnormal. A protein metabolic process is a series of chemical reactions and pathways involving a specific protein.","definition_xrefs":["GO:0019538","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_02592":null,"SJAG_02763":null,"SJAG_03940":null,"SJAG_04551":null,"SJAG_04697":null},"genotype_count":7,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein metabolic process","references_by_uniquename":{"PMID:26774782":null,"PMID:34198697":null,"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_00610","SJAG_04551","SJAG_04697","SJAG_01787","SJAG_02592","SJAG_03940"],"single_locus_genotype_uniquenames":["gms1delta","sty1delta","nem2delta","pck1delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","pck2delta"],"synonyms":[{"name":"abnormal cellular protein metabolic process","type":"exact"},{"name":"abnormal protein metabolism","type":"exact"}],"termid":"FYPO:0002274","terms_by_termid":{"FYECO:0000207":null,"FYPO:0001038":null,"FYPO:0001838":null,"FYPO:0002033":null,"FYPO:0002678":null,"FYPO:0002680":null,"FYPO:0003727":null,"FYPO:0005957":null,"FYPO_EXT:0000001":null}}


id: MONDO:0002319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A metabolic disorder that affects the phosphate homeostasis.","definition_xrefs":["NCIT:C97095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mineral metabolism disease","termid":"MONDO:0000226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"phosphorus metabolism disease","secondary_identifiers":["UMLS:C0031707","ICD10CM:E83.3","SCTID:87049008","ICD9:275.3","DOID:2485","MEDGEN:19276","MESH:D010760"],"synonyms":[{"name":"disorder of phosphorus metabolism","type":"exact"},{"name":"phosphorus disorder","type":"exact"},{"name":"phosphorus metabolic disorder","type":"exact"},{"name":"phosphorus metabolism disorder","type":"exact"}],"termid":"MONDO:0002319","xrefs":{"Monarch":{"xref_id":"0002319"}}}


id: MONDO:1010532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate, non-human animal","termid":"MONDO:1010037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, rabbit","secondary_identifiers":["OMIA:000197-9986"],"termid":"MONDO:1010532","xrefs":{"Monarch":{"xref_id":"1010532"}}}


id: GO:0002440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of any molecular mediator of the immune response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add","GO_REF:0000022","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"gene expression","termid":"GO:0010467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"production of molecular mediator of immune response","synonyms":[{"name":"production of cellular mediator of immune response","type":"related"}],"termid":"GO:0002440"}


id: PBO:0045280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 31","termid":"PBO:0045280"}


id: MONDO:0003229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lymphedema (obsolete MONDO:0003229)","termid":"MONDO:0003229","xrefs":{"Monarch":{"xref_id":"0003229"}}}


id: GO:0007315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the specialized cytoplasm found at the poles of the egg. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasm organization","termid":"GO:0007028"},{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"oocyte anterior/posterior axis specification","termid":"GO:0007314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"pole plasm assembly","secondary_identifiers":["GO:0048113"],"termid":"GO:0007315"}


id: MONDO:0012229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 9","secondary_identifiers":["OMIM:609258","MEDGEN:332222","MESH:C563759","UMLS:C1836504"],"synonyms":[{"name":"MYP9","type":"exact"},{"name":"myopia 9","type":"exact"}],"termid":"MONDO:0012229","xrefs":{"Monarch":{"xref_id":"0012229"}}}


id: GO:0051199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a prosthetic group.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of prosthetic group metabolic process (obsolete GO:0051199)","synonyms":[{"name":"regulation of coenzyme and prosthetic group metabolic process","type":"broad"},{"name":"regulation of coenzyme and prosthetic group metabolism","type":"broad"},{"name":"regulation of prosthetic group metabolism","type":"exact"}],"termid":"GO:0051199"}


id: GO:0008892
data:
  {"annotated_genes":["SJAG_01997"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114527],"is_not":false,"summary":null,"term":"GO:0008892"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: guanine + H2O = xanthine + NH3.","definition_xrefs":["EC:3.5.4.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01997":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"guanine deaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GUANINE-DEAMINASE-RXN","Reactome:R-HSA-74255","RHEA:14665"],"synonyms":[{"name":"GAH activity","type":"related"},{"name":"guanase activity","type":"related"},{"name":"guanine aminase activity","type":"related"},{"name":"guanine aminohydrolase activity","type":"related"}],"termid":"GO:0008892","terms_by_termid":{"GO:0008892":null}}


id: PBO:0029628
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_sister_chromatid_cohesion","termid":"PBO:0029628"}


id: PBO:0075189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 1","termid":"PBO:0075189"}


id: MONDO:0020774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Menke-Hennekam syndrome","secondary_identifiers":["GARD:22371","MEDGEN:1814480","OMIMPS:618332","UMLS:C5681632","Orphanet:592574"],"termid":"MONDO:0020774","xrefs":{"Monarch":{"xref_id":"0020774"}}}


id: GO:0042350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GDP-L-fucose, a substance composed of L-fucose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"GDP-L-fucose metabolic process","termid":"GO:0046368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"GDP-L-fucose biosynthetic process","secondary_identifiers":["Reactome:R-HSA-6787639"],"synonyms":[{"name":"GDP-L-fucose anabolism","type":"exact"},{"name":"GDP-L-fucose biosynthesis","type":"exact"},{"name":"GDP-L-fucose formation","type":"exact"},{"name":"GDP-L-fucose synthesis","type":"exact"}],"termid":"GO:0042350"}


id: GO:0061963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of the dormancy process that results in entry into reproductive diapause. Reproductive diapause is a form of diapause where the organism itself will remain fully active, including feeding and other routine activities, but the reproductive organs experience a tissue-specific reduction in metabolism, with characteristic triggering and releasing stimuli.","definition_xrefs":["PMID:27689881","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"entry into reproductive diapause","termid":"GO:0055116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of entry into reproductive diapause","termid":"GO:0061963"}


id: SO:0001111
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A beta strand describes a single length of polypeptide chain that forms part of a beta sheet. A single continuous stretch of amino acids adopting an extended conformation of hydrogen bonds between the N-O and the C=O of another part of the peptide. This forms a secondary protein structure in which two or more extended polypeptide regions are hydrogen-bonded to one another in a planar array.","definition_xrefs":["UniProt:curation_manual","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_strand","secondary_identifiers":["BS:00042","http://en.wikipedia.org/wiki/Beta_sheet"],"synonyms":[{"name":"strand","type":"related"}],"termid":"SO:0001111"}


id: GO:0061487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which DNA-dependent DNA replication is started at a late origin of replication. A late origin of replication refers to an origin that is activated late in S phase.","definition_xrefs":["GOC:dph","PMID:19221029"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA replication initiation from late origin (obsolete GO:0061487)","synonyms":[{"name":"late replication origin firing","type":"exact"}],"termid":"GO:0061487"}


id: PBO:0002595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan glucosidase Exg2, unknown specificity","termid":"PBO:0002595"}


id: MONDO:0060583
data:
  {"annotated_genes":["SJAG_02075"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84709],"is_not":false,"summary":null,"term":"MONDO:0060583"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02075":null},"genotype_count":0,"is_obsolete":false,"name":"platelet abnormalities with eosinophilia and immune-mediated inflammatory disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617718","UMLS:C4540232","MEDGEN:1618052","DOID:0112004"],"synonyms":[{"name":"PLTEID","type":"related"},{"name":"immunodeficiency 71 with inflammatory disease and congenital thrombocytopenia","type":"exact"},{"name":"platelet abnormalities with eosinophilia and immune-mediated inflammatory disease","type":"exact"}],"termid":"MONDO:0060583","terms_by_termid":{"MONDO:0060583":null},"xrefs":{"Monarch":{"xref_id":"0060583"}}}


id: MONDO:0009061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cystic fibrosis (CF) is a genetic disorder characterized by the production of sweat with a high salt content and mucus secretions with an abnormal viscosity.","definition_xrefs":["Orphanet:586","Wikipedia:Cystic_fibrosis"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pancreas disorder","termid":"MONDO:0002356"},{"relation_name":"excluded_subClassOf","term_name":"obsolete hereditary biliary tract disease (obsolete MONDO:0015509)","termid":"MONDO:0015509"},{"relation_name":"excluded_subClassOf","term_name":"obsolete rare male fertility disorder with obstructive azoospermia (obsolete MONDO:0018396)","termid":"MONDO:0018396"},{"relation_name":"excluded_subClassOf","term_name":"obsolete rare genetic disorder with obstructive azoospermia (obsolete MONDO:0018409)","termid":"MONDO:0018409"},{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"cystic fibrosis","secondary_identifiers":["NANDO:2100035","MESH:D003550","NCIT:C2975","UMLS:C0010674","NORD:1026","MEDGEN:41393","GARD:6233","OMIM:219700","ICD10CM:E84","ICD9:277.0","SCTID:190905008","NANDO:2200205","MedDRA:10011762","DOID:1485","NANDO:1200922","icd11.foundation:514403112","NANDO:1201021"],"synonyms":[{"name":"CF","type":"exact"},{"name":"cystic fibrosis","type":"exact"},{"name":"cystic fibrosis lung disease, modifier of","type":"exact"},{"name":"mucoviscidosis","type":"exact"},{"name":"pseudomonas aeruginosa, susceptibility to chronic infection by, in cystic fibrosis","type":"exact"}],"termid":"MONDO:0009061","xrefs":{"Monarch":{"xref_id":"0009061"}}}


id: GO:0106273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of proteins from the cystosol to the endoplasmic reticulum-Golgi intermediate compartment (ERGIC).","definition_xrefs":["PMID:32272059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"cytosol to ERGIC protein transport","termid":"GO:0106273"}


id: PBO:0005850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPX/EXS domain protein (predicted)","termid":"PBO:0005850"}


id: PR:Q09695
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psr1 gene.","definition_xrefs":["UniProtKB:Q09695","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2F7.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F7.02c","synonyms":[{"name":"Spom972h-psr1","type":"exact"}],"termid":"PR:Q09695"}


id: GO:1901448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to butan-1-ol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to alcohol","termid":"GO:1901419"},{"relation_name":"regulates","term_name":"response to butan-1-ol","termid":"GO:1901422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to butan-1-ol","termid":"GO:1901448"}


id: MONDO:0019435
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A category of juvenile idiopathic arthritis defined by the presence of arthritis affecting five or more separate joints during the first six months of disease, with positive serologic testing for rheumatoid factor.","definition_xrefs":["NCIT:C119034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyarticular juvenile idiopathic arthritis","termid":"MONDO:0018456"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rheumatoid factor-positive polyarticular juvenile idiopathic arthritis","secondary_identifiers":["UMLS:C3890733","EFO:0009731","Orphanet:85435","NANDO:2201058","GARD:19064","MEDGEN:855737"],"synonyms":[{"name":"juvenile idiopathic rheumatoid factor-positive polyarthritis","type":"exact"},{"name":"polyarthritis with rheumatoid factor","type":"exact"},{"name":"polyarticular JIA, RF+","type":"exact"},{"name":"polyarticular juvenile idiopathic arthritis, RF+","type":"exact"},{"name":"polyarticular juvenile idiopathic arthritis, rheumatoid Factor Positive","type":"exact"},{"name":"rheumatoid factor-positive polyarticular JIA","type":"exact"}],"termid":"MONDO:0019435","xrefs":{"Monarch":{"xref_id":"0019435"}}}


id: GO:1905809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of synapse organization.","definition_xrefs":["PMID:27779093","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse organization","termid":"GO:0050807"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"negatively_regulates","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of synapse organization","synonyms":[{"name":"down regulation of synapse development","type":"exact"},{"name":"down regulation of synapse morphogenesis","type":"related"},{"name":"down regulation of synapse organisation","type":"exact"},{"name":"down regulation of synapse organization","type":"exact"},{"name":"down regulation of synapse organization and biogenesis","type":"related"},{"name":"down-regulation of synapse development","type":"exact"},{"name":"down-regulation of synapse morphogenesis","type":"related"},{"name":"down-regulation of synapse organisation","type":"exact"},{"name":"down-regulation of synapse organization","type":"exact"},{"name":"down-regulation of synapse organization and biogenesis","type":"related"},{"name":"downregulation of synapse development","type":"exact"},{"name":"downregulation of synapse morphogenesis","type":"related"},{"name":"downregulation of synapse organisation","type":"exact"},{"name":"downregulation of synapse organization","type":"exact"},{"name":"downregulation of synapse organization and biogenesis","type":"related"},{"name":"inhibition of synapse development","type":"narrow"},{"name":"inhibition of synapse morphogenesis","type":"related"},{"name":"inhibition of synapse organisation","type":"narrow"},{"name":"inhibition of synapse organization","type":"narrow"},{"name":"inhibition of synapse organization and biogenesis","type":"related"},{"name":"negative regulation of synapse development","type":"exact"},{"name":"negative regulation of synapse morphogenesis","type":"related"},{"name":"negative regulation of synapse organisation","type":"exact"},{"name":"negative regulation of synapse organization and biogenesis","type":"related"}],"termid":"GO:1905809"}


id: PR:O13636
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial import inner membrane translocase subunit TIM50 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12210:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim50 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.01c","secondary_identifiers":["UniProtKB:O13636"],"synonyms":[{"name":"Spom972h-TIMM50","type":"exact"},{"name":"pi044","type":"related"}],"termid":"PR:O13636"}


id: PBO:0027601
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_actomyosin_contractile_ring_morphology","termid":"PBO:0027601"}


id: MONDO:0859309
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 88, autosomal dominant","secondary_identifiers":["OMIM:620106","DOID:0070457","UMLS:C5774247","MEDGEN:1824020"],"termid":"MONDO:0859309","xrefs":{"Monarch":{"xref_id":"0859309"}}}


id: FYPO:0000245
data:
  {"alleles_by_uniquename":{"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119085],"is_not":false,"summary":null,"term":"FYPO:0000245"},{"annotations":[119080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005231"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after entering stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02527":null,"SJAG_04312":null},"genotype_count":2,"genotypes_by_uniquename":{"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"loss of viability in stationary phase","references_by_uniquename":{"PMID:27678009":null,"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_02527","SJAG_04312"],"single_locus_genotype_uniquenames":["pka1delta","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown"],"synonyms":[{"name":"decreased chronological lifespan","type":"related"},{"name":"decreased viability in stationary phase","type":"exact"},{"name":"growth defect, required for stationary phase","type":"related"},{"name":"increased chronological cell aging","type":"related"},{"name":"loss of cell population viability in stationary phase","type":"exact"},{"name":"reduced viability in stationary phase","type":"exact"}],"termid":"FYPO:0000245","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000245":null,"FYPO:0005231":null}}


id: PBO:0048730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate dehydrogenase 1","termid":"PBO:0048730"}


id: MONDO:0015219
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A central nervous system malformation that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic central nervous system malformation (obsolete MONDO:0015219)","secondary_identifiers":["Orphanet:108989"],"synonyms":[{"name":"isolated central nervous system malformation","type":"exact"},{"name":"nonsyndromic central nervous system malformation","type":"exact"}],"termid":"MONDO:0015219","xrefs":{"Monarch":{"xref_id":"0015219"}}}


id: GO:0032764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of mast cell cytokine production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production involved in immune response","termid":"GO:0002719"},{"relation_name":"is_a","term_name":"regulation of mast cell cytokine production","termid":"GO:0032763"},{"relation_name":"negatively_regulates","term_name":"mast cell cytokine production","termid":"GO:0032762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mast cell cytokine production","synonyms":[{"name":"down regulation of mast cell cytokine production","type":"exact"},{"name":"down-regulation of mast cell cytokine production","type":"exact"},{"name":"downregulation of mast cell cytokine production","type":"exact"},{"name":"inhibition of mast cell cytokine production","type":"narrow"}],"termid":"GO:0032764"}


id: PBO:0067577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 734, pseudogene","termid":"PBO:0067577"}


id: PBO:0063343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PEST containing nuclear protein pseudogene 3","termid":"PBO:0063343"}


id: PBO:0069490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 757, pseudogene","termid":"PBO:0069490"}


id: PBO:0041663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit gamma 8","termid":"PBO:0041663"}


id: GO:0000308
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cyclin-dependent protein kinase (CDK) complex found in the cytoplasm.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic cyclin-dependent protein kinase holoenzyme complex","synonyms":[{"name":"CDK holoenzyme","type":"broad"}],"termid":"GO:0000308"}


id: PBO:0079084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 1-1","termid":"PBO:0079084"}


id: MONDO:0020187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete eyelashes hypertrophy (obsolete MONDO:0020187)","secondary_identifiers":["Orphanet:98597"],"synonyms":[{"name":"eyelashes polytrichia","type":"exact"},{"name":"eyelashes trichomegalia","type":"exact"}],"termid":"MONDO:0020187","xrefs":{"Monarch":{"xref_id":"0020187"}}}


id: GO:0061308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a cardiac neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell that contributes to the development of the heart.","definition_xrefs":["GOC:dph","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural crest cell development","termid":"GO:0014032"},{"relation_name":"part_of","term_name":"cardiac neural crest cell differentiation involved in heart development","termid":"GO:0061307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac neural crest cell development involved in heart development","termid":"GO:0061308"}


id: GO:0031901
data:
  {"annotated_genes":["SJAG_01379","SJAG_00314","SJAG_01112"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95382,99210,111942],"is_not":false,"summary":null,"term":"GO:0031901"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding an early endosome.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome membrane","termid":"GO:0010008"},{"relation_name":"part_of","term_name":"early endosome","termid":"GO:0005769"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00314":null,"SJAG_01112":null,"SJAG_01379":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005768","GO:0005575"],"is_obsolete":false,"name":"early endosome membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031901","terms_by_termid":{"GO:0031901":null}}


id: PBO:0113556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-K4 methyltransferase, Set1C/COMPASS complex, Set1","termid":"PBO:0113556"}


id: PBO:0110328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD36 pseudogene 2","termid":"PBO:0110328"}


id: GO:0070484
data:
  {"annotated_genes":["SJAG_00265"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070485"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dehydro-D-arabinono-1,4-lactone, the gamma-lactone (5R)-3,4-dihydroxy-5-(hydroxymethyl)furan-2(5H)-one.","definition_xrefs":["GOC:mah","GOC:cjk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dehydro-D-arabinono-1,4-lactone metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dehydro-D-arabinono-1,4-lactone metabolism","type":"exact"}],"termid":"GO:0070484","terms_by_termid":{"GO:0070485":null}}


id: GO:0003267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A canonical Wnt signaling pathway that contributes to an increase in the frequency, or rate of cardioblast proliferation in the secondary heart field. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in positive regulation of secondary heart field cardioblast proliferation (obsolete GO:0003267)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in positive regulation of second heart field cardioblast proliferation","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in positive regulation of secondary heart field cardioblast proliferation","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in positive regulation of secondary heart field cardioblast proliferation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in positive regulation of secondary heart field cardioblast proliferation","type":"related"}],"termid":"GO:0003267"}


id: PATO:0001021
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's capacity to do work.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Energy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"energy","termid":"PATO:0001021"}


id: MONDO:0009664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A prenatal onset growth disorder with multiorgan manifestations.","definition_xrefs":["Orphanet:2576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"disorder of defective peroxisome oxidative status","termid":"MONDO:0100306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019053","MONDO:0005066"],"is_obsolete":false,"name":"mulibrey nanism","secondary_identifiers":["OMIM:253250","MESH:D050336","SCTID:81604003","GARD:95","MEDGEN:99347","NCIT:C84906","ICD9:759.89","icd11.foundation:1167260635","DOID:0050436","NORD:1465","UMLS:C0524582"],"synonyms":[{"name":"MUL","type":"exact"},{"name":"Perheentupa syndrome","type":"exact"},{"name":"mulibrey dwarfism","type":"exact"},{"name":"mulibrey nanism","type":"exact"},{"name":"muscle-liver-brain-eye nanism","type":"exact"},{"name":"pericardial constriction and Growth failure","type":"related"},{"name":"pericardial constriction and growth failure","type":"exact"},{"name":"pericardial constriction-growth failure syndrome","type":"exact"}],"termid":"MONDO:0009664","xrefs":{"Monarch":{"xref_id":"0009664"}}}


id: PBO:0027069
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_transport","termid":"PBO:0027069"}


id: PBO:0042918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFTR pseudogene 1","termid":"PBO:0042918"}


id: GO:2000965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellooligosaccharide catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of cellooligosaccharide metabolic process","termid":"GO:2000962"},{"relation_name":"is_a","term_name":"regulation of cellooligosaccharide catabolic process","termid":"GO:2000963"},{"relation_name":"positively_regulates","term_name":"cellooligosaccharide catabolic process","termid":"GO:2000903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellooligosaccharide catabolic process","synonyms":[{"name":"positive regulation of cellooligosaccharide catabolism","type":"exact"}],"termid":"GO:2000965"}


id: MOD:01707
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl group with an isotope tagged reagent acyloxy group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isotope tagged reagent O-acylated residue","termid":"MOD:01707"}


id: PBO:0003193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear membrane organization protein Apq12 (predicted)","termid":"PBO:0003193"}


id: MONDO:0009185
data:
  {"annotated_genes":["SJAG_04454"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84933],"is_not":false,"summary":null,"term":"MONDO:0009185"}]},"cv_name":"mondo","definition":"Kohlschütter-TC6nz syndrome (KTS) is a genetically heterogeneous autosomal recessive syndrome characterized by the triad of amelogenesis imperfect, infantile onset epilepsy, intellectual disability with or without regression and dementia.","definition_xrefs":["Orphanet:1946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"amelocerebrohypohidrotic syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C537213","UMLS:C0406740","SCTID:109478007","OMIM:226750","MEDGEN:98036","GARD:3128","DOID:0111668"],"synonyms":[{"name":"KOHLSCHUTTER-Tonz syndrome","type":"related"},{"name":"KTZS","type":"related"},{"name":"Kohlschutter Tonz syndrome","type":"related"},{"name":"Kohlschutter syndrome","type":"related"},{"name":"Kohlschutter-Tonz syndrome","type":"exact"},{"name":"amelocerebrohypohidrotic syndrome","type":"exact"},{"name":"epilepsy and Yellow teeth","type":"related"},{"name":"epilepsy dementia amelogenesis imperfecta","type":"related"},{"name":"epilepsy, dementia, and amelogenesis imperfecta","type":"related"},{"name":"epilepsy-dementia-amelogenesis imperfecta syndrome","type":"exact"}],"termid":"MONDO:0009185","terms_by_termid":{"MONDO:0009185":null},"xrefs":{"Monarch":{"xref_id":"0009185"}}}


id: MONDO:0024308
data:
  {"annotated_genes":["SJAG_03785","SJAG_05213","SJAG_01344"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84659,84660,84658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009925"},{"annotations":[85374,85373,85375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008333"}]},"cv_name":"mondo","definition":"An inherited disorder that causes calcium and other minerals to accumulate in the elastic fibers of the skin, eyes, and blood vessels, and less frequently in other areas such as the digestive tract.","definition_xrefs":["GARD:0009643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_03785":null,"SJAG_05213":null},"genotype_count":0,"is_obsolete":false,"name":"pseudoxanthoma elasticum (inherited or acquired)","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0033847","ICD9:757.39","SCTID:252246005","MEDGEN:18733","NANDO:1200643"],"synonyms":[{"name":"PXE","type":"exact"},{"name":"pseudoxanthoma elasticum","type":"exact"}],"termid":"MONDO:0024308","terms_by_termid":{"MONDO:0008333":null,"MONDO:0009925":null},"xrefs":{"Monarch":{"xref_id":"0024308"}}}


id: GO:1900642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of austinol biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of austinol biosynthetic process","termid":"GO:1900640"},{"relation_name":"positively_regulates","term_name":"austinol biosynthetic process","termid":"GO:1900560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of austinol biosynthetic process","synonyms":[{"name":"activation of austinol anabolism","type":"exact"},{"name":"activation of austinol biosynthesis","type":"exact"},{"name":"activation of austinol biosynthetic process","type":"narrow"},{"name":"activation of austinol formation","type":"exact"},{"name":"activation of austinol synthesis","type":"exact"},{"name":"positive regulation of austinol anabolism","type":"exact"},{"name":"positive regulation of austinol biosynthesis","type":"exact"},{"name":"positive regulation of austinol formation","type":"exact"},{"name":"positive regulation of austinol synthesis","type":"exact"},{"name":"up regulation of austinol anabolism","type":"exact"},{"name":"up regulation of austinol biosynthesis","type":"exact"},{"name":"up regulation of austinol biosynthetic process","type":"exact"},{"name":"up regulation of austinol formation","type":"exact"},{"name":"up regulation of austinol synthesis","type":"exact"},{"name":"up-regulation of austinol anabolism","type":"exact"},{"name":"up-regulation of austinol biosynthesis","type":"exact"},{"name":"up-regulation of austinol biosynthetic process","type":"exact"},{"name":"up-regulation of austinol formation","type":"exact"},{"name":"up-regulation of austinol synthesis","type":"exact"},{"name":"upregulation of austinol anabolism","type":"exact"},{"name":"upregulation of austinol biosynthesis","type":"exact"},{"name":"upregulation of austinol biosynthetic process","type":"exact"},{"name":"upregulation of austinol formation","type":"exact"},{"name":"upregulation of austinol synthesis","type":"exact"}],"termid":"GO:1900642"}


id: GO:0140587
data:
  {"annotated_genes":["SJAG_00698"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140585"}]},"cv_name":"molecular_function","definition":"Bridging together two DNA loop anchors together, maintaining a chromatin loop.","definition_xrefs":["PMID:32213323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin DNA binding","termid":"GO:0031490"},{"relation_name":"is_a","term_name":"DNA-DNA tethering activity","termid":"GO:0106260"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00698":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0060090","GO:0005488"],"is_obsolete":false,"name":"chromatin loop anchoring activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA loop binding","type":"exact"},{"name":"chromosomal loop binding","type":"exact"}],"termid":"GO:0140587","terms_by_termid":{"GO:0140585":null}}


id: PBO:0040845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B cell linker","termid":"PBO:0040845"}


id: MONDO:0015812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary cutaneous gamma/delta-positive T-cell lymphoma is a rare, usually aggressive, subtype of cutaneous T-cell lymphoma characterized by infiltration of the epidermis, dermis or subcutaneous tissue by a clonal population of mature, gamma/delta positive cytotoxic T-cells. Typically it presents with ulcerating plaques, tumors, or subcutaneous nodules on the skin of the extremities, however, frequent involvement of mucosal and extranodal sites (such as the nasal cavity, gastrointestinal tract or lungs) is also observed. Cases associated with panniculitis may present with hemophagocytic syndrome (abrupt onset of fever, rash, cytopenia, hepatosplenomegaly and neurological compromise). Infiltration of lymph nodes, spleen and bone marrow is uncommon and resistance to multilineage chemotherapy is reported.","definition_xrefs":["Orphanet:178533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary cutaneous T-cell lymphoma","termid":"MONDO:0015758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093","MONDO:0005570"],"is_obsolete":false,"name":"primary cutaneous gamma/delta-positive T-cell lymphoma","secondary_identifiers":["ICD10CM:C84.4","GARD:20158"],"termid":"MONDO:0015812","xrefs":{"Monarch":{"xref_id":"0015812"}}}


id: PBO:0062295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 6 pseudogene","termid":"PBO:0062295"}


id: GO:0042944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of D-alanine from one side of a membrane to the other. D-alanine is the D-enantiomer of 2-aminopropanoic acid.","definition_xrefs":["GOC:mtg_transport","GOC:jl","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine transmembrane transporter activity","termid":"GO:0022858"},{"relation_name":"is_a","term_name":"D-amino acid transmembrane transporter activity","termid":"GO:0042943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"D-alanine transmembrane transporter activity","synonyms":[{"name":"D-alanine transporter activity","type":"broad"}],"termid":"GO:0042944"}


id: SO:0000957
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, double-stranded, linear DNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"linear","termid":"SO:0000987"},{"relation_name":"is_a","term_name":"double_stranded_DNA_chromosome","termid":"SO:0000955"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linear_double_stranded_DNA_chromosome","synonyms":[{"name":"linear double stranded DNA chromosome","type":"exact"}],"termid":"SO:0000957"}


id: MONDO:1011647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic valvular disease, non-human animal","secondary_identifiers":["OMIA:001246"],"termid":"MONDO:1011647","xrefs":{"Monarch":{"xref_id":"1011647"}}}


id: GO:0043563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of odorants, any substance capable of stimulating the sense of smell, into, out of or within a cell, or between cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete odorant transporter activity (obsolete GO:0043563)","termid":"GO:0043563"}


id: MONDO:1012377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nasal parakeratosis, non-human animal","termid":"MONDO:1011752"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasal parakeratosis, dog","secondary_identifiers":["OMIA:001373-9615"],"termid":"MONDO:1012377","xrefs":{"Monarch":{"xref_id":"1012377"}}}


id: PBO:0056772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 22, Kin17 lysine","termid":"PBO:0056772"}


id: PBO:0036017
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K56_acetylation_during_vegetative_growth","termid":"PBO:0036017"}


id: PBO:0085029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-myristoyl transferase; catalyzes the cotranslational, covalent attachment of myristic acid to the N-terminal glycine residue of several proteins involved in cellular growth and signal transduction","termid":"PBO:0085029"}


id: FYPO:0003358
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to miconazole. Cells stop growing (and may die) at a concentration of miconazole that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to miconazole","synonyms":[{"name":"hypersensitive to miconazole","type":"exact"},{"name":"sensitive to miconazole during mitotic cell cycle","type":"related"},{"name":"sensitive to miconazole during vegetative growth","type":"exact"},{"name":"sensitivity to chemicals interfering with lipids","type":"broad"}],"termid":"FYPO:0003358"}


id: MOD:01709
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino- or imino-hydrogen with one of the Applied Biosystems iTRAQ4plex reagent reporter+balance groups.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent N-acylated residue","termid":"MOD:01706"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex reporter+balance reagent N-acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01709"}


id: GO:1900957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of 17-methylnonadec-1-ene biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of olefin biosynthetic process","termid":"GO:1900912"},{"relation_name":"is_a","term_name":"regulation of 17-methylnonadec-1-ene biosynthetic process","termid":"GO:1900956"},{"relation_name":"is_a","term_name":"negative regulation of 17-methylnonadec-1-ene metabolic process","termid":"GO:1900960"},{"relation_name":"negatively_regulates","term_name":"17-methylnonadec-1-ene biosynthetic process","termid":"GO:1900883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of 17-methylnonadec-1-ene biosynthetic process","synonyms":[{"name":"down regulation of 17-methylnonadec-1-ene anabolism","type":"exact"},{"name":"down regulation of 17-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"down regulation of 17-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"down regulation of 17-methylnonadec-1-ene formation","type":"exact"},{"name":"down regulation of 17-methylnonadec-1-ene synthesis","type":"exact"},{"name":"down-regulation of 17-methylnonadec-1-ene anabolism","type":"exact"},{"name":"down-regulation of 17-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"down-regulation of 17-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"down-regulation of 17-methylnonadec-1-ene formation","type":"exact"},{"name":"down-regulation of 17-methylnonadec-1-ene synthesis","type":"exact"},{"name":"downregulation of 17-methylnonadec-1-ene anabolism","type":"exact"},{"name":"downregulation of 17-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"downregulation of 17-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"downregulation of 17-methylnonadec-1-ene formation","type":"exact"},{"name":"downregulation of 17-methylnonadec-1-ene synthesis","type":"exact"},{"name":"inhibition of 17-methylnonadec-1-ene anabolism","type":"exact"},{"name":"inhibition of 17-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"inhibition of 17-methylnonadec-1-ene biosynthetic process","type":"narrow"},{"name":"inhibition of 17-methylnonadec-1-ene formation","type":"exact"},{"name":"inhibition of 17-methylnonadec-1-ene synthesis","type":"exact"},{"name":"negative regulation of 17-methylnonadec-1-ene anabolism","type":"exact"},{"name":"negative regulation of 17-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"negative regulation of 17-methylnonadec-1-ene formation","type":"exact"},{"name":"negative regulation of 17-methylnonadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900957"}


id: PBO:0050780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 1D pseudogene 1","termid":"PBO:0050780"}


id: GO:0032062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of translation as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translation in response to stress","termid":"GO:0032056"},{"relation_name":"is_a","term_name":"regulation of translation in response to osmotic stress","termid":"GO:0043557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of translation in response to osmotic stress","synonyms":[{"name":"activation of translation in response to osmotic stress","type":"narrow"},{"name":"stimulation of translation in response to osmotic stress","type":"narrow"},{"name":"up regulation of translation in response to osmotic stress","type":"exact"},{"name":"up-regulation of translation in response to osmotic stress","type":"exact"},{"name":"upregulation of translation in response to osmotic stress","type":"exact"}],"termid":"GO:0032062"}


id: MONDO:0013481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Monosomy 13q14 is a rare chromosomal anomaly syndrome, resulting from a partial deletion of the long arm of chromosome 13, characterized by developmental delay, variable degrees of intellectual disability, retinoblastoma and craniofacial dysmorphism (incl. micro/dolichocephaly, high and broad forehead, prominent eyebrows, thick, anteverted ear lobes, short nose with a broad nasal bridge and bulbous tip, prominent philtrum, large mouth with thin upper lip and thick, everted lower lip). Other features reported include high birth weight, macrocephaly, pinealoma, hepatomegaly, inguinal hernia and cryptorchidism.","definition_xrefs":["Orphanet:1587"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete chromosomal anomaly with cataract (obsolete MONDO:0020226)","termid":"MONDO:0020226"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 13","termid":"MONDO:0016911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 13q14 deletion syndrome","secondary_identifiers":["NCIT:C36421","UMLS:C3151302","MEDGEN:462652","GARD:16570","DOID:0060391","MESH:C535484","OMIM:613884"],"synonyms":[{"name":"Del(13)(q14)","type":"exact"},{"name":"chromosome 13Q deletion syndrome","type":"related"},{"name":"chromosome 13q14 deletion syndrome","type":"exact"},{"name":"chromosome 13q14 deletion syndrome, isolated cases","type":"exact"},{"name":"del(13q14)","type":"exact"},{"name":"deletion 13q14","type":"exact"},{"name":"monosomy 13q14","type":"related"},{"name":"monosomy type 13q14","type":"exact"}],"termid":"MONDO:0013481","xrefs":{"Monarch":{"xref_id":"0013481"}}}


id: MONDO:0014910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the TTC25 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 35","secondary_identifiers":["DOID:0110620","GARD:16188","OMIM:617092","MEDGEN:934688","UMLS:C4310721"],"synonyms":[{"name":"CILD35","type":"exact"},{"name":"TTC25 primary ciliary dyskinesia","type":"exact"},{"name":"ciliary dyskinesia, primary, 35","type":"exact"},{"name":"ciliary dyskinesia, primary, 35, with or without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 35","type":"exact"},{"name":"primary ciliary dyskinesia 35 with or without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in TTC25","type":"exact"},{"name":"primary ciliary dyskinesia type 35","type":"exact"}],"termid":"MONDO:0014910","xrefs":{"Monarch":{"xref_id":"0014910"}}}


id: MONDO:0018819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fibular aplasia-tibial campomelia-oligosyndactyly syndrome (obsolete MONDO:0018819)","termid":"MONDO:0018819","xrefs":{"Monarch":{"xref_id":"0018819"}}}


id: PATO:0002205
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's ability to hold an electrical charge.","definition_xrefs":["Wikipedia:Wikipedia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capacitance","termid":"PATO:0002205"}


id: MONDO:0008734
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of adrenal cortex carcinoma that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary renal cell carcinoma","termid":"MONDO:0003008"},{"relation_name":"is_a","term_name":"adrenal cortex carcinoma","termid":"MONDO:0006639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"adrenocortical carcinoma, hereditary","secondary_identifiers":["UMLS:C1859972","OMIM:202300","GARD:15132","MEDGEN:348508","MESH:C565972"],"synonyms":[{"name":"ADCC","type":"related"},{"name":"adrenocortical carcinoma, hereditary","type":"exact"},{"name":"adrenocortical carcinoma, paediatric","type":"related"},{"name":"adrenocortical carcinoma, pediatric","type":"related"},{"name":"hereditary adrenal cortex carcinoma","type":"exact"}],"termid":"MONDO:0008734","xrefs":{"Monarch":{"xref_id":"0008734"}}}


id: GO:0015171
data:
  {"annotated_genes":["SJAG_01994","SJAG_04903","SJAG_00015","SJAG_00019","SJAG_04984","SJAG_02955","SJAG_02144","SJAG_01770","SJAG_02029","SJAG_04725","SJAG_00522","SJAG_03899","SJAG_04588","SJAG_04295","SJAG_04718","SJAG_02113","SJAG_06598","SJAG_02947","SJAG_04787","SJAG_03829","SJAG_03256","SJAG_02133","SJAG_03400","SJAG_02941","SJAG_01096","SJAG_01998","SJAG_02946","SJAG_02062","SJAG_04135","SJAG_03827","SJAG_04957","SJAG_05342","SJAG_04637","SJAG_02150","SJAG_00626","SJAG_00543","SJAG_00149","SJAG_04296","SJAG_00051","SJAG_00877"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75049,76180,77235,87047,87048,87049,87050,87051,87052,87053,87054,87087,87088,87089,87090,89182,99522,103028,103268,105525,108921,108928,110079,113193,117758,117759,117760,117761,117762,117763,117764,117765,117856,117950,118504],"is_not":false,"summary":null,"term":"GO:0015171"},{"annotations":[94079,89877,95187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015174"},{"annotations":[113188,118507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033229"},{"annotations":[97726,99737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015187"},{"annotations":[95513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034639"},{"annotations":[95514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015179"},{"annotations":[103340,96852,99858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061459"},{"annotations":[109521,102303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015182"},{"annotations":[96051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015183"},{"annotations":[96052,103341,97727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005313"},{"annotations":[96853,103342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005290"},{"annotations":[102304,109522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015188"},{"annotations":[102305,109523,96854,99859,103343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015189"},{"annotations":[107397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000064"},{"annotations":[99851,100713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015193"},{"annotations":[90099,103344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015194"},{"annotations":[103345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005302"}]},"cv_name":"molecular_function","definition":"Enables the transfer of amino acids from one side of a membrane to the other. 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id: GO:1990377
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extracellular matrix consisting of a densely packed organomineral assembly in which the mineral phase represents the majority of the material by weight.","definition_xrefs":["GOC:jh2","PMID:15994301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specialized extracellular matrix","termid":"GO:0140047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"organomineral extracellular matrix","termid":"GO:1990377"}


id: PBO:0044609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 13","termid":"PBO:0044609"}


id: GO:0023023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a major histocompatibility complex.","definition_xrefs":["GOC:vw","GOC:mtg_signal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"MHC protein complex binding","termid":"GO:0023023"}


id: MONDO:0000158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spectrum of hip abnormalities commonly presenting in infancy involving the relationship between the femoral head and the acetabulum and that includes subluxation or dislocation at rest or upon provocation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"bone development disease","termid":"MONDO:0005497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"developmental dysplasia of the hip","secondary_identifiers":["EFO:1000648","ICD9:755.63","OMIMPS:142700","SCTID:52781008","DOID:0060930","MESH:D000082602","UMLS:C4551649","MEDGEN:1640560"],"synonyms":[{"name":"congenital acetabular dysplasia","type":"related"},{"name":"congenital dysplasia of the hip","type":"related"},{"name":"congenital hip dysplasia","type":"exact"},{"name":"dysplasia of acetabulum","type":"related"}],"termid":"MONDO:0000158","xrefs":{"Monarch":{"xref_id":"0000158"}}}


id: PBO:0074402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 10 like 1","termid":"PBO:0074402"}


id: MONDO:0957988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta","termid":"MONDO:0019019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta, type 23","secondary_identifiers":["UMLS:C5882757","OMIM:620639","MEDGEN:1846121"],"termid":"MONDO:0957988","xrefs":{"Monarch":{"xref_id":"0957988"}}}


id: GO:0006757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group into ADP, adenosine diphosphate, to produce ATP.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete ATP generation from ADP (obsolete GO:0006757)","synonyms":[{"name":"ADP phosphorylation","type":"exact"}],"termid":"GO:0006757"}


id: PBO:0000989
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.87","termid":"PBO:0000989"}


id: GO:2000240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tRNA export from nucleus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of RNA export from nucleus","termid":"GO:0046833"},{"relation_name":"is_a","term_name":"positive regulation of ribonucleoprotein complex localization","termid":"GO:2000199"},{"relation_name":"is_a","term_name":"regulation of tRNA export from nucleus","termid":"GO:2000238"},{"relation_name":"positively_regulates","term_name":"tRNA export from nucleus","termid":"GO:0006409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0006913","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of tRNA export from nucleus","synonyms":[{"name":"positive regulation of tRNA export from cell nucleus","type":"exact"},{"name":"positive regulation of tRNA export out of nucleus","type":"exact"},{"name":"positive regulation of tRNA transport from nucleus to cytoplasm","type":"exact"},{"name":"positive regulation of tRNA-nucleus export","type":"exact"}],"termid":"GO:2000240"}


id: MONDO:0014696
data:
  {"annotated_genes":["SJAG_02031"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84500],"is_not":false,"summary":null,"term":"MONDO:0014696"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"COFS syndrome","termid":"MONDO:0008926"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02031":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005328","MONDO:0021190","MONDO:0005066"],"is_obsolete":false,"name":"cerebrooculofacioskeletal syndrome 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C565035","OMIM:616570","DOID:0080913","GARD:16140","MEDGEN:342008","UMLS:C1851443"],"synonyms":[{"name":"COFS3","type":"exact"},{"name":"cerebrooculofacioskeletal syndrome 3","type":"exact"},{"name":"cerebrooculofacioskeletal syndrome type 3","type":"exact"}],"termid":"MONDO:0014696","terms_by_termid":{"MONDO:0014696":null},"xrefs":{"Monarch":{"xref_id":"0014696"}}}


id: GO:0047106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (4-hydroxyphenyl)acetaldehyde + H2O + NAD+ = 4-hydroxyphenylacetate + 2 H+ + NADH.","definition_xrefs":["RHEA:17273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"4-hydroxyphenylacetaldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["EC:1.2.1.53","MetaCyc:1.2.1.53-RXN"],"synonyms":[{"name":"4-HPAL dehydrogenase activity","type":"related"},{"name":"4-hydroxyphenylacetaldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0047106"}


id: PBO:0059847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like","termid":"PBO:0059847"}


id: GO:0032310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a prostaglandin, any of a group of biologically active metabolites which contain a cyclopentane ring, from a cell or a tissue.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin transport","termid":"GO:0015732"},{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"},{"relation_name":"is_a","term_name":"icosanoid secretion","termid":"GO:0032309"},{"relation_name":"is_a","term_name":"lipid export from cell","termid":"GO:0140353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"prostaglandin secretion","synonyms":[{"name":"prostacyclin secretion","type":"narrow"}],"termid":"GO:0032310"}


id: PBO:0070849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene","termid":"PBO:0070849"}


id: GO:0102483
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + scopolin = beta-D-glucose + scopoletin.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete scopolin beta-glucosidase activity (obsolete GO:0102483)","termid":"GO:0102483"}


id: MONDO:1012062
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyperosmolar nonketotic diabetes mellitus, non-human animal","termid":"MONDO:1011674"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperosmolar nonketotic diabetes mellitus, domestic cat","secondary_identifiers":["OMIA:000280-9685"],"termid":"MONDO:1012062","xrefs":{"Monarch":{"xref_id":"1012062"}}}


id: FYPO:0001627
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-alanine measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"},{"relation_name":"is_a","term_name":"normal cellular alanine level","termid":"FYPO:0001638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal vacuolar alanine level","synonyms":[{"name":"normal level of alanine in vacuole","type":"exact"},{"name":"normal vacuolar L-alanine level","type":"exact"},{"name":"normal vacuolar alanine level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar alanine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001627"}


id: GO:0030964
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integral membrane complex that possesses NADH oxidoreductase activity. The complex is one of the components of the electron transport chain. It catalyzes the transfer of a pair of electrons from NADH to a quinone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"NADH dehydrogenase complex","secondary_identifiers":["GO:0030966","Wikipedia:NADH_dehydrogenase","GO:0031677","GO:0031675","GO:0031678","GO:0045280","GO:0030025"],"synonyms":[{"name":"NADH dehydrogenase complex (plastoquinone)","type":"narrow"},{"name":"NADH dehydrogenase complex (quinone)","type":"narrow"},{"name":"NADH dehydrogenase complex (ubiquinone)","type":"narrow"},{"name":"NADH:plastoquinone reductase complex","type":"narrow"},{"name":"plastid NADH dehydrogenase complex (plastoquinone)","type":"narrow"}],"termid":"GO:0030964"}


id: PBO:0091056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger C3HC-type containing RNA export factor Rsm1","termid":"PBO:0091056"}


id: PBO:0068537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 140, pseudogene","termid":"PBO:0068537"}


id: PR:Q9HGN2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein SET that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein C36B7.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36B7.08c","secondary_identifiers":["UniProtKB:Q9HGN2"],"synonyms":[{"name":"Spom972h-SET","type":"exact"}],"termid":"PR:Q9HGN2"}


id: GO:1903815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of collecting lymphatic vessel constriction.","definition_xrefs":["PMID:23897233","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of collecting lymphatic vessel constriction","termid":"GO:1903814"},{"relation_name":"negatively_regulates","term_name":"collecting lymphatic vessel constriction","termid":"GO:1990192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of collecting lymphatic vessel constriction","synonyms":[{"name":"down regulation of collecting lymphatic vessel constriction","type":"exact"},{"name":"down regulation of lymphatic vessel myogenic constriction","type":"exact"},{"name":"down-regulation of collecting lymphatic vessel constriction","type":"exact"},{"name":"down-regulation of lymphatic vessel myogenic constriction","type":"exact"},{"name":"downregulation of collecting lymphatic vessel constriction","type":"exact"},{"name":"downregulation of lymphatic vessel myogenic constriction","type":"exact"},{"name":"inhibition of collecting lymphatic vessel constriction","type":"narrow"},{"name":"inhibition of lymphatic vessel myogenic constriction","type":"narrow"},{"name":"negative regulation of lymphatic vessel myogenic constriction","type":"exact"}],"termid":"GO:1903815"}


id: SO:0002327
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A splice_acceptor_variant (SO:0001574) that is degraded by nonsense-mediated decay (NMD).","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_acceptor_variant","termid":"SO:0001574"},{"relation_name":"is_a","term_name":"NMD_triggering_variant","termid":"SO:0002319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_acceptor_variant_NMD_triggering","synonyms":[{"name":"splice acceptor variant-NMD triggering","type":"exact"},{"name":"splice acceptor variant-nonsense-mediated decay triggering","type":"exact"}],"termid":"SO:0002327"}


id: PBO:0046252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator acetyltransferase complex subunit 1","termid":"PBO:0046252"}


id: MONDO:0012696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"otosclerosis","termid":"MONDO:0005349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otosclerosis 4","secondary_identifiers":["MEDGEN:369916","OMIM:611571","MESH:C566914","DOID:0060923","UMLS:C1969046"],"synonyms":[{"name":"OTSC4","type":"exact"},{"name":"otosclerosis 4","type":"exact"}],"termid":"MONDO:0012696","xrefs":{"Monarch":{"xref_id":"0012696"}}}


id: MONDO:0000269
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inhalation anthrax (obsolete MONDO:0000269)","termid":"MONDO:0000269","xrefs":{"Monarch":{"xref_id":"0000269"}}}


id: PBO:0030615
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cell_wall-degrading_enzymes","termid":"PBO:0030615"}


id: GO:0009392
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GlcNAc-1,6-anhMurNAc-L-Ala-gamma-D-Glu-DAP-D-Ala + H2O glcNAc-1,6-anhMurNAc + L-Ala-gamma-D-Glu-DAP-D-Ala.","definition_xrefs":["MetaCyc:RXN0-5225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"N-acetyl-anhydromuramoyl-L-alanine amidase activity","termid":"GO:0009392"}


id: GO:0043647
data:
  {"annotated_genes":["SJAG_02321","SJAG_01148","SJAG_04067","SJAG_04870","SJAG_01154","SJAG_01702","SJAG_03409","SJAG_00321","SJAG_00244","SJAG_01970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67609,106397,106398,114542],"is_not":false,"summary":null,"term":"GO:0043647"},{"annotations":[88188,104687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071543"},{"annotations":[92863,114540,116500,98297,118319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032958"},{"annotations":[114541,88189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071545"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving inositol phosphate, 1,2,3,4,5,6-cyclohexanehexol, with one or more phosphate groups attached.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00321":null,"SJAG_01148":null,"SJAG_01154":null,"SJAG_01702":null,"SJAG_01970":null,"SJAG_02321":null,"SJAG_03409":null,"SJAG_04067":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"inositol phosphate metabolic process","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1483249"],"synonyms":[{"name":"inositol phosphate metabolism","type":"exact"},{"name":"myo-inositol phosphate metabolic process","type":"narrow"},{"name":"myo-inositol phosphate metabolism","type":"narrow"}],"termid":"GO:0043647","terms_by_termid":{"GO:0032958":null,"GO:0043647":null,"GO:0071543":null,"GO:0071545":null}}


id: MONDO:0001173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute inflammation of the fallopian tube. It is most often caused by Neisseria gonorrhoeae and Chlamydia trachomatis infections. The infections usually originate in the vagina and ascend to the fallopian tube. Symptoms include abdominal, pelvic, and lower back pain, pain during ovulation and sexual intercourse, fever, nausea, and vomiting. Complications include infertility and ectopic pregnancy.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salpingitis","termid":"MONDO:0003619"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute salpingitis","secondary_identifiers":["DOID:10973","SCTID:8912009","UMLS:C0269038","ICD10CM:N70.01","icd11.foundation:1286268784","MEDGEN:82838","NCIT:C40120"],"synonyms":[{"name":"salpingitis, acute","type":"exact"}],"termid":"MONDO:0001173","xrefs":{"Monarch":{"xref_id":"0001173"}}}


id: MONDO:0017357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient hyperammonemia of the newborn","secondary_identifiers":["UMLS:C0268549","MEDGEN:541358","GARD:21159","Orphanet:289877"],"termid":"MONDO:0017357","xrefs":{"Monarch":{"xref_id":"0017357"}}}


id: PBO:0069999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1294, pseudogene","termid":"PBO:0069999"}


id: PBO:0003962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRR1 family protein","termid":"PBO:0003962"}


id: PBO:0045722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F5 divergent transcript","termid":"PBO:0045722"}


id: SO:0000847
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a tmRNA.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature_transcript_region","termid":"SO:0000834"},{"relation_name":"part_of","term_name":"tmRNA","termid":"SO:0000584"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tmRNA_region","synonyms":[{"name":"tmRNA region","type":"exact"}],"termid":"SO:0000847"}


id: PBO:0042374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD200 receptor 1 like","termid":"PBO:0042374"}


id: GO:0047731
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 catechol + 3 O2 = 2 dibenzo[1,4]dioxin-2,3-dione + 6 H2O.","definition_xrefs":["MetaCyc:CATECHOL-OXIDASE-DIMERIZING-RXN","EC:1.1.3.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"catechol oxidase (dimerizing) activity","secondary_identifiers":["RHEA:12809"],"synonyms":[{"name":"catechol:oxygen oxidoreductase (dimerizing)","type":"related"}],"termid":"GO:0047731"}


id: MONDO:0018234
data:
  {"annotated_genes":["SJAG_02165","SJAG_04092","SJAG_03703","SJAG_00414","SJAG_00197","SJAG_03144","SJAG_04270","SJAG_02200","SJAG_04995","SJAG_00504","SJAG_00322","SJAG_01852","SJAG_04825","SJAG_03484","SJAG_03249","SJAG_00539","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014651"},{"annotations":[85629,85630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013895"},{"annotations":[85099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008726"},{"annotations":[84573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020667"},{"annotations":[84504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014700"},{"annotations":[84922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014558"},{"annotations":[85028,85029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009039"},{"annotations":[85805,85804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012137"},{"annotations":[85214,85215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958175"},{"annotations":[85896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011640"},{"annotations":[86101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013740"},{"annotations":[85463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012516"},{"annotations":[84667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007943"},{"annotations":[84891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009903"},{"annotations":[85051,85052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009955"},{"annotations":[86572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010121"}]},"cv_name":"mondo","definition":"A group of disorders in which the skeletal involvement is predominantly manifested as abnormalities of individual bones or in a group of bones.","direct_ancestors":[{"relation_name":"is_a","term_name":"bone development disease","termid":"MONDO:0005497"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00322":null,"SJAG_00414":null,"SJAG_00504":null,"SJAG_00539":null,"SJAG_01852":null,"SJAG_02165":null,"SJAG_02200":null,"SJAG_02431":null,"SJAG_03144":null,"SJAG_03249":null,"SJAG_03484":null,"SJAG_03703":null,"SJAG_04092":null,"SJAG_04270":null,"SJAG_04825":null,"SJAG_04995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"dysostosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D004413","GARD:21571","ICD9:756.9","SCTID:109420003","NCIT:C34560","UMLS:C0013393","DOID:1934","MEDGEN:4430","Orphanet:364559"],"synonyms":[{"name":"dysostosis","type":"exact"}],"termid":"MONDO:0018234","terms_by_termid":{"MONDO:0007943":null,"MONDO:0008726":null,"MONDO:0009039":null,"MONDO:0009903":null,"MONDO:0009955":null,"MONDO:0010121":null,"MONDO:0011640":null,"MONDO:0012137":null,"MONDO:0012516":null,"MONDO:0013740":null,"MONDO:0013895":null,"MONDO:0014558":null,"MONDO:0014651":null,"MONDO:0014700":null,"MONDO:0020667":null,"MONDO:0958175":null},"xrefs":{"Monarch":{"xref_id":"0018234"}}}


id: PBO:0089352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi 4,6-pyruvylated galactose (PvGal) residue biosynthesis protein Pvg5","termid":"PBO:0089352"}


id: PBO:0049809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDAC2 and HS3ST5 antisense RNA 2","termid":"PBO:0049809"}


id: MONDO:0002085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign shuddering attacks","secondary_identifiers":["DOID:1713","ICD10CM:G25.83","SCTID:446995005","UMLS:C0375200","MEDGEN:580931","ICD9:333.93"],"termid":"MONDO:0002085","xrefs":{"Monarch":{"xref_id":"0002085"}}}


id: FYPO:0007669
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, has a larger volume than normal, and undergoes one or more rounds of rereplication of the entire genome. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah","PMID:8121488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of mitotic DNA replication initiation","termid":"FYPO:0000216"},{"relation_name":"is_a","term_name":"viable swollen vegetative cell","termid":"FYPO:0002377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0000004","FYPO:0000005","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"viable swollen vegetative cell with complete DNA rereplication","synonyms":[{"name":"viable enlarged vegetative cell with complete DNA rereplication","type":"related"},{"name":"viable large vegetative cell with complete DNA rereplication","type":"related"},{"name":"viable swollen cell with complete DNA rereplication during vegetative growth","type":"exact"},{"name":"viable swollen vegetative cell with abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication","type":"exact"},{"name":"viable swollen vegetative cell with complete DNA rereplication during mitotic cell cycle","type":"related"},{"name":"viable swollen vegetative cell with increased ploidy","type":"exact"},{"name":"viable vegetative cell with increased cell size and complete DNA rereplication","type":"related"},{"name":"viable vegetative cell with increased cell volume and complete DNA rereplication","type":"exact"}],"termid":"FYPO:0007669"}


id: GO:0160158
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that catalyzes the oxidative decarboxylation of branched-chain alpha-keto acids derived from L-leucine, L-isoleucine, and L-valine to branched-chain acyl-CoAs. It is composed of four polypeptides, E1alpha, E1beta, E2, and E3.","definition_xrefs":["PMID:10464218"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic branched-chain alpha-keto acid dehydrogenase complex (obsolete GO:0160158)","synonyms":[{"name":"BKDH complex","type":"exact"}],"termid":"GO:0160158"}


id: PBO:0057121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 205","termid":"PBO:0057121"}


id: PBO:0001210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP cyclohydrolase II (predicted)","termid":"PBO:0001210"}


id: PBO:0086577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; deletion confers reduced fitness in saline","termid":"PBO:0086577"}


id: MONDO:0018805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cystic dilatation of the hepatic duct or bile duct.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile duct disorder","termid":"MONDO:0002887"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"bile duct cyst","secondary_identifiers":["MESH:D015529","DOID:899","icd11.foundation:819487805","ICD10CM:Q44.4","OMIM:603003","ICD9:751.69","ICD9:576.8","GARD:21973","Orphanet:480501","SCTID:397868007","MEDGEN:3037","UMLS:C0008340"],"synonyms":[{"name":"bile duct cysts","type":"exact"},{"name":"choledochal cyst","type":"exact"},{"name":"choledochal cysts","type":"exact"},{"name":"choledochocele","type":"exact"},{"name":"congenital choledochal cyst","type":"exact"},{"name":"congenital cystic dilatation of the biliary tract","type":"exact"}],"termid":"MONDO:0018805","xrefs":{"Monarch":{"xref_id":"0018805"}}}


id: FYPO:0001769
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional addition of methyl groups to the C38 residue in a tRNA-Asp molecule, occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA methylation","termid":"FYPO:0001766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000294","FYPO:0006551","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased tRNA-Asp C38 methylation","synonyms":[{"name":"increased tRNA-Asp C38 methylation during mitotic cell cycle","type":"related"},{"name":"increased tRNA-Asp C38 methylation during vegetative growth","type":"exact"},{"name":"increased tRNA-Asp methylation on C38","type":"exact"}],"termid":"FYPO:0001769"}


id: PBO:0061504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRSN2 antisense RNA 1","termid":"PBO:0061504"}


id: GO:0009497
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 3Fe-4S/4Fe-4S electron transfer carrier (obsolete GO:0009497)","synonyms":[{"name":"3Fe-4S/4Fe-4S electron transfer carrier","type":"exact"}],"termid":"GO:0009497"}


id: PBO:0065348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRXL2C pseudogene 1","termid":"PBO:0065348"}


id: PBO:0060425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NGFI-A binding protein 1","termid":"PBO:0060425"}


id: PR:O74771
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dip1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein dip1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC24C6.10c","synonyms":[{"name":"Spom972h-dip1","type":"exact"}],"termid":"PR:O74771"}


id: MONDO:0008767
data:
  {"annotated_genes":["SJAG_02716"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85332],"is_not":false,"summary":null,"term":"MONDO:0008767"}]},"cv_name":"mondo","definition":"A condition associated with mutation(s) in the CLN3 gene, encoding battenin. The condition is one of a group of genetically heterogeneous neurodegenerative disorders, characterized by accumulation of intracellular lipopigments.","definition_xrefs":["NCIT:C61258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile neuronal ceroid lipofuscinosis","termid":"MONDO:0019262"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02716":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005559","MONDO:0002039","MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:155549","NORD:843","DOID:0110731","OMIM:204200","Orphanet:228346","UMLS:C0751383","GARD:5897"],"synonyms":[{"name":"CLN3","type":"exact"},{"name":"CLN3 disease","type":"related"},{"name":"CLN3 disease, juvenile","type":"related"},{"name":"CLN3 neuronal ceroid lipofuscinosis","type":"exact"},{"name":"Juvenile CLN3 Disease","type":"exact"},{"name":"Spielmeyer Sjogren disease","type":"related"},{"name":"Spielmeyer-Sjogren disease","type":"related"},{"name":"Vogt Spielmeyer disease","type":"related"},{"name":"Vogt-Spielmeyer disease","type":"related"},{"name":"batten disease","type":"related"},{"name":"ceroid lipofuscinosis, neuronal, 3","type":"related"},{"name":"ceroid lipofuscinosis, neuronal, type 3","type":"exact"},{"name":"neuronal ceroid lipofuscinosis 3","type":"exact"},{"name":"neuronal ceroid lipofuscinosis caused by mutation in CLN3","type":"exact"},{"name":"neuronal ceroid lipofuscinosis type 3","type":"exact"},{"name":"neuronal ceroid lipofuscinosis, juvenile","type":"related"}],"termid":"MONDO:0008767","terms_by_termid":{"MONDO:0008767":null},"xrefs":{"Monarch":{"xref_id":"0008767"}}}


id: PBO:0017567
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spina bifida","termid":"PBO:0017567"}


id: FYPO:0002101
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an 3'-5' DNA helicase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal 3'-5' DNA helicase activity","termid":"FYPO:0002100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000641","FYPO:0005447","FYPO:0000654","FYPO:0001985","FYPO:0000002","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abolished 3'-5' DNA helicase activity","synonyms":[{"name":"3'-5' DNA helicase activity abolished","type":"exact"}],"termid":"FYPO:0002101"}


id: MONDO:0003877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cervical adenoid basal carcinoma (obsolete MONDO:0003877)","termid":"MONDO:0003877","xrefs":{"Monarch":{"xref_id":"0003877"}}}


id: GO:0031246
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the cell outer membrane consisting of the gene products that that penetrate the periplasmic side of the cell outer membrane only, either directly or via some covalently attached hydrophobic anchor.","definition_xrefs":["GOC:mah","GOC:mtg_sensu","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of periplasmic side of cell outer membrane (obsolete GO:0031246)","synonyms":[{"name":"intrinsic to external side of cell outer membrane","type":"narrow"},{"name":"intrinsic to internal leaflet of cell outer membrane","type":"exact"},{"name":"intrinsic to internal side of cell outer membrane","type":"exact"},{"name":"intrinsic to internal side of outer membrane","type":"exact"}],"termid":"GO:0031246"}


id: PBO:0077967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (AGC) 19-1","termid":"PBO:0077967"}


id: PBO:0075990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stanniocalcin 2","termid":"PBO:0075990"}


id: MONDO:0018035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome with combined immunodeficiency (obsolete MONDO:0018035)","secondary_identifiers":["Orphanet:331217","NANDO:2100203"],"termid":"MONDO:0018035","xrefs":{"Monarch":{"xref_id":"0018035"}}}


id: PBO:0077683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF superfamily member 13","termid":"PBO:0077683"}


id: PBO:0051990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"janus kinase and microtubule interacting protein 2","termid":"PBO:0051990"}


id: PBO:0081348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 157","termid":"PBO:0081348"}


id: MONDO:0033641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, proliferative retinopathy, and developmental delay","secondary_identifiers":["UMLS:C5436739","OMIM:619074","MEDGEN:1765503"],"synonyms":[{"name":"CPPRDD","type":"exact"}],"termid":"MONDO:0033641","xrefs":{"Monarch":{"xref_id":"0033641"}}}


id: MONDO:1012571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cancer that occurs in domestic cats.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feline neoplasm","termid":"MONDO:0700175"},{"relation_name":"is_a","term_name":"cancer, non-human animal","termid":"MONDO:1011828"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer, domestic cat","secondary_identifiers":["OMIA:002587-9685"],"termid":"MONDO:1012571","xrefs":{"Monarch":{"xref_id":"1012571"}}}


id: PBO:0045835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 25","termid":"PBO:0045835"}


id: PBO:0067660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 837, pseudogene","termid":"PBO:0067660"}


id: GO:1902612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anti-Mullerian hormone signaling pathway.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:hjd","PMID:23624077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090092"},{"relation_name":"regulates","term_name":"anti-Mullerian hormone receptor signaling pathway","termid":"GO:1990262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of anti-Mullerian hormone signaling pathway","termid":"GO:1902612"}


id: PBO:0030918
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cortex_morphology_during_vegetative_growth","termid":"PBO:0030918"}


id: GO:0047009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + 3-alpha-hydroxy-5-beta-androstane-17-one = NADH + H+ + 5-beta-androstane-3,17-dione.","definition_xrefs":["MetaCyc:1.1.1.152-RXN","EC:1.1.1.152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3-alpha-hydroxy-5-beta-androstane-17-one 3-alpha-dehydrogenase activity","secondary_identifiers":["RHEA:10356"],"synonyms":[{"name":"3alpha-hydroxy-5beta-androstane-17-one 3alpha-dehydrogenase activity","type":"related"},{"name":"3alpha-hydroxy-5beta-steroid dehydrogenase activity","type":"related"},{"name":"3alpha-hydroxy-5beta-steroid:NAD+ 3-oxidoreductase activity","type":"related"},{"name":"etiocholanolone 3-alpha-dehydrogenase activity","type":"related"},{"name":"etiocholanolone 3alpha-dehydrogenase activity","type":"related"}],"termid":"GO:0047009"}


id: GO:1900057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of leaf senescence.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of leaf senescence","termid":"GO:1900055"},{"relation_name":"positively_regulates","term_name":"leaf senescence","termid":"GO:0010150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of leaf senescence","synonyms":[{"name":"activation of leaf senescence","type":"related"},{"name":"up regulation of leaf senescence","type":"related"},{"name":"up-regulation of leaf senescence","type":"related"},{"name":"upregulation of leaf senescence","type":"related"}],"termid":"GO:1900057"}


id: GO:0004978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with corticotropin to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocortin receptor activity","termid":"GO:0004977"},{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"corticotropin receptor activity","synonyms":[{"name":"ACTH receptor activity","type":"exact"},{"name":"adrenocorticotropic hormone receptor activity","type":"exact"},{"name":"adrenocorticotropin receptor activity","type":"exact"}],"termid":"GO:0004978"}


id: GO:1900093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of raffinose biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:22307851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of raffinose biosynthetic process","termid":"GO:1900091"},{"relation_name":"positively_regulates","term_name":"raffinose biosynthetic process","termid":"GO:0033529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of raffinose biosynthetic process","synonyms":[{"name":"activation of raffinose anabolism","type":"exact"},{"name":"activation of raffinose biosynthesis","type":"exact"},{"name":"activation of raffinose biosynthetic process","type":"narrow"},{"name":"activation of raffinose formation","type":"exact"},{"name":"activation of raffinose synthesis","type":"exact"},{"name":"positive regulation of raffinose anabolism","type":"exact"},{"name":"positive regulation of raffinose biosynthesis","type":"exact"},{"name":"positive regulation of raffinose formation","type":"exact"},{"name":"positive regulation of raffinose synthesis","type":"exact"},{"name":"up regulation of raffinose anabolism","type":"exact"},{"name":"up regulation of raffinose biosynthesis","type":"exact"},{"name":"up regulation of raffinose biosynthetic process","type":"exact"},{"name":"up regulation of raffinose formation","type":"exact"},{"name":"up regulation of raffinose synthesis","type":"exact"},{"name":"up-regulation of raffinose anabolism","type":"exact"},{"name":"up-regulation of raffinose biosynthesis","type":"exact"},{"name":"up-regulation of raffinose biosynthetic process","type":"exact"},{"name":"up-regulation of raffinose formation","type":"exact"},{"name":"up-regulation of raffinose synthesis","type":"exact"},{"name":"upregulation of raffinose anabolism","type":"exact"},{"name":"upregulation of raffinose biosynthesis","type":"exact"},{"name":"upregulation of raffinose biosynthetic process","type":"exact"},{"name":"upregulation of raffinose formation","type":"exact"},{"name":"upregulation of raffinose synthesis","type":"exact"}],"termid":"GO:1900093"}


id: PBO:0085071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nonhistone component of centromeric chromatin; binds to histone H3 variant, Cse4p, and recruits it to centromeres; involved in the assembly and maintenance of Cse4-H4 at centromeres; required for kinetochore assembly and G2/M progression; may protect Cse4p from ubiquitination; homolog of mammalian HJURP","termid":"PBO:0085071"}


id: PBO:0017591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine transmembrane transporter Thi9","termid":"PBO:0017591"}


id: GO:0100050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates mating type switching.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mating type switching by transcription from RNA polymerase II promoter (obsolete GO:0100050)","termid":"GO:0100050"}


id: MONDO:0008567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland papillary carcinoma","termid":"MONDO:0005075"},{"relation_name":"is_a","term_name":"familial nonmedullary thyroid carcinoma","termid":"MONDO:0017896"},{"relation_name":"is_a","term_name":"NKX2-1 related choreoathetosis and congenital hypothyroidism with or without pulmonary dysfunction","termid":"MONDO:0100520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thyroid cancer, nonmedullary, 1","secondary_identifiers":["OMIM:188550","UMLS:C4721429","MEDGEN:1648293"],"synonyms":[{"name":"NMTC1","type":"related"},{"name":"familial nonmedullary thyroid cancer, papillary","type":"related"},{"name":"nonmedullary thyroid carcinoma, papillary","type":"related"},{"name":"papillary carcinoma of thyroid","type":"related"},{"name":"thyroid cancer, nonmedullary, 1","type":"exact"},{"name":"thyroid cancer, nonmedullary, type 1","type":"exact"}],"termid":"MONDO:0008567","xrefs":{"Monarch":{"xref_id":"0008567"}}}


id: GO:0006252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete CTP reduction (obsolete GO:0006252)","synonyms":[{"name":"CTP reduction","type":"exact"}],"termid":"GO:0006252"}


id: PBO:0090087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease catalytic subunit Sen2","termid":"PBO:0090087"}


id: PBO:0082429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Blocked reading frame, contains two in-frame stops in translation; this ORF is conserved, without the stops, in Saccharomyces paradoxus, S. mikatae, and S. bayanus; RNA sequencing data indicate the presence of a transcription unit at this reading frame","termid":"PBO:0082429"}


id: GO:0060464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a lung lobe from unspecified parts. This process begins with the specific processes that contribute to the appearance of the lobe and ends when the structural rudiment is recognizable. A lung lobe is a projection that extends from the lung.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"lung lobe morphogenesis","termid":"GO:0060463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung lobe formation","termid":"GO:0060464"}


id: FYPO:0004152
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of pyridoxal measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular pyridoxal level","synonyms":[{"name":"increased cellular pyridoxal level during mitotic cell cycle","type":"related"},{"name":"increased cellular pyridoxal level during vegetative growth","type":"exact"},{"name":"increased pyridoxal accumulation","type":"related"}],"termid":"FYPO:0004152"}


id: PBO:0025446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-P ortholog Fta2","termid":"PBO:0025446"}


id: PBO:0082887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin; interacts with Pho85p cyclin-dependent kinase (Cdk) to phosphorylate and regulate glycogen synthase, also activates Pho85p for Glc8p phosphorylation; PCL8 has a paralog, PCL10, that arose from the whole genome duplication","termid":"PBO:0082887"}


id: GO:0042937
data:
  {"annotated_genes":["SJAG_01660","SJAG_01983","SJAG_03577"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102514],"is_not":false,"summary":null,"term":"GO:0042937"},{"annotations":[112630,95012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034634"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a tripeptide, a compound containing three amino acids linked together by peptide bonds, from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transmembrane transporter activity","termid":"GO:0035673"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01660":null,"SJAG_01983":null,"SJAG_03577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"tripeptide transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tripeptide transporter activity","type":"related"}],"termid":"GO:0042937","terms_by_termid":{"GO:0034634":null,"GO:0042937":null}}


id: FYPO:0008274
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which glutamate biosynthesis is abnormal.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased glutamate biosynthesis","termid":"FYPO:0008274"}


id: GO:0001788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cytolysis of target cells by natural killer cells, eosinophils, neutrophils, monocytes, or macrophages following engagement of antibodies bound to the target cells by Fc receptors on the effector cells.","definition_xrefs":["PMID:9581795","ISBN:0781735149","PMID:11677095","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type IIa hypersensitivity","termid":"GO:0001794"},{"relation_name":"is_a","term_name":"leukocyte mediated cytotoxicity","termid":"GO:0001909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antibody-dependent cellular cytotoxicity","secondary_identifiers":["Wikipedia:Antibody-dependent_cell-mediated_cytotoxicity","Wikipedia:Antibody-dependent_cellular_cytotoxicity"],"synonyms":[{"name":"ADCC","type":"exact"},{"name":"antibody dependent cell death","type":"exact"},{"name":"antibody dependent cell killing","type":"exact"},{"name":"antibody-dependent cell death","type":"exact"},{"name":"antibody-dependent cell killing","type":"exact"},{"name":"type VI hypersensitivity","type":"exact"}],"termid":"GO:0001788"}


id: GO:0047586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5'-acylphosphoadenosine + H2O = AMP + a carboxylate.","definition_xrefs":["MetaCyc:5-ACYLPHOSPHOADENOSINE-HYDROLASE-RXN","EC:3.6.1.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides","termid":"GO:0016818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"5'-acylphosphoadenosine hydrolase activity","secondary_identifiers":["RHEA:16837"],"synonyms":[{"name":"5'-acylphosphoadenosine acylhydrolase activity","type":"related"},{"name":"5-phosphoadenosine hydrolase activity","type":"related"}],"termid":"GO:0047586"}


id: PBO:0077426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 163","termid":"PBO:0077426"}


id: FYPO:0005819
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the neddylation of one or more specific proteins, or of specific protein sites, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0002494","FYPO:0005447","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"abnormal protein neddylation during vegetative growth","synonyms":[{"name":"abnormal protein neddylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005819"}


id: GO:1904565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 1-oleoyl-sn-glycerol 3-phosphate stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:12139919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to organophosphorus","termid":"GO:0046683"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 1-oleoyl-sn-glycerol 3-phosphate","synonyms":[{"name":"response to 1-oleoyl lysophosphatidic acid","type":"exact"},{"name":"response to LPA","type":"exact"},{"name":"response to lysophosphatidic acid","type":"exact"},{"name":"response to oleoyl lysophosphatidic acid","type":"exact"},{"name":"response to oleoyl-L-alpha-lysophosphatidic acid","type":"exact"}],"termid":"GO:1904565"}


id: GO:0062174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of brexanolone.","definition_xrefs":["PMID:24390875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"brexanolone metabolic process","termid":"GO:0062173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"brexanolone biosynthetic process","synonyms":[{"name":"allopregnanolone anabolism","type":"exact"},{"name":"allopregnanolone biosynthesis","type":"exact"},{"name":"allopregnanolone biosynthetic process","type":"exact"},{"name":"allopregnanolone synthesis","type":"exact"},{"name":"allotetrahydroprogesterone anabolism","type":"exact"},{"name":"allotetrahydroprogesterone biosynthesis","type":"exact"},{"name":"allotetrahydroprogesterone biosynthetic process","type":"exact"},{"name":"allotetrahydroprogesterone synthesis","type":"exact"},{"name":"brexanolone anabolism","type":"exact"},{"name":"brexanolone biosynthesis","type":"exact"},{"name":"brexanolone synthesis","type":"exact"}],"termid":"GO:0062174"}


id: FYPO:0006278
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the structure of an O-linked glycan moiety of a nascent or mature glycoprotein differs from wild type.","definition_xrefs":["PomBase:mah","PMID:22988247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glycoprotein glycan structure","termid":"FYPO:0003290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0003290"},{"rel_name":"output_of","termid":"FYPO:0002274"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0002494"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0003290"],"is_obsolete":false,"name":"abnormal O-linked glycoprotein glycan structure","synonyms":[{"name":"abnormal O-linked glycoprotein oligosaccharide structure","type":"related"}],"termid":"FYPO:0006278"}


id: PBO:0081109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFAND2A divergent transcript","termid":"PBO:0081109"}


id: _global:negatively_regulates
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p negatively regulates q iff p regulates q, and p decreases the rate or magnitude of execution of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of,_negative_effect","termid":"_global:causally_upstream_of,_negative_effect"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"regulates","termid":"_global:regulates"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negatively_regulates","secondary_identifiers":["RO:0002212"],"termid":"_global:negatively_regulates"}


id: PBO:0065551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E receptor 4 pseudogene 1","termid":"PBO:0065551"}


id: PBO:0062944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferation-associated 2G4 pseudogene 2","termid":"PBO:0062944"}


id: PBO:0028802
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_replication_fork_arrest_at_mating-type_locus","termid":"PBO:0028802"}


id: MONDO:0011871
data:
  {"annotated_genes":["SJAG_00570"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85690],"is_not":false,"summary":null,"term":"MONDO:0011871"}]},"cv_name":"mondo","definition":"Niemann-Pick disease type B is a mild subtype of Niemann-Pick disease, an autosomal recessive lysosomal disease, and is characterized clinically by onset in childhood with hepatosplenomegaly, growth retardation, and lung disorders such as infections and dyspnea","definition_xrefs":["Orphanet:77293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"interstitial lung disease specific to childhood","termid":"MONDO:0017014"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"acid sphingomyelinase deficiency","termid":"MONDO:0100464"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00570":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0002561","MONDO:0005244","MONDO:0006025","MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"Niemann-Pick disease type B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200062","ICD10CM:E75.241","SCTID:39390005","icd11.foundation:327269975","NANDO:2201207","MESH:D052537","NCIT:C126866","DOID:0070112","MEDGEN:78651","UMLS:C0268243","GARD:10729","OMIM:607616"],"synonyms":[{"name":"Niemann Pick disease type B","type":"related"},{"name":"Niemann-PICK disease, type B","type":"related"},{"name":"Niemann-Pick disease, Intermediate, with visceral involvement and rapid progression","type":"related"},{"name":"Niemann-Pick disease, type E","type":"related"},{"name":"Niemann-Pick disease, type F","type":"related"},{"name":"type B Niemann-Pick disease","type":"exact"}],"termid":"MONDO:0011871","terms_by_termid":{"MONDO:0011871":null},"xrefs":{"Monarch":{"xref_id":"0011871"}}}


id: PBO:0072601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSF1 intronic transcript 2","termid":"PBO:0072601"}


id: GO:0032635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-6 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-6 production","secondary_identifiers":["GO:0072604","GO:0042226"],"synonyms":[{"name":"IL-6 production","type":"exact"},{"name":"interleukin-6 biosynthetic process","type":"narrow"},{"name":"interleukin-6 secretion","type":"narrow"}],"termid":"GO:0032635"}


id: GO:0150043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the extracellular matrix of the perisynaptic space (the extracellular space adjacent to the synapse) and the synaptic cleft.","definition_xrefs":["GOC:aruk","PMID:17189701","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix structural constituent","termid":"GO:0005201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of synapse-associated extracellular matrix","synonyms":[{"name":"extra-synaptic extracellular matrix structural constituent","type":"exact"},{"name":"structural constituent of extra-synaptic extracellular matrix","type":"exact"},{"name":"synapse-associated extracellular matrix structural constituent","type":"exact"}],"termid":"GO:0150043"}


id: PBO:0043232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride voltage-gated channel 3 pseudogene 1","termid":"PBO:0043232"}


id: GO:0047749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-beta-cholestane-3-alpha,7-alpha,12-alpha-triol + NADPH + O2 = 5-beta-cholestane-3-alpha,7-alpha,12-alpha,26-tetraol + NADP+ + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cholestanetriol 26-monooxygenase activity (obsolete GO:0047749)","synonyms":[{"name":"CYP27A","type":"related"},{"name":"CYP27A1","type":"related"}],"termid":"GO:0047749"}


id: MONDO:0009545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macroepiphyseal dysplasia with osteoporosis, wrinkled skin, and aged appearance","secondary_identifiers":["UMLS:C2931597","OMIM:248010","MESH:C537721","MEDGEN:419847"],"synonyms":[{"name":"Macroepiphyseal dysplasia, McAlister coe type","type":"related"},{"name":"McAlister coe Whyte syndrome","type":"related"},{"name":"macroepiphyseal dysplasia with osteoporosis, wrinkled skin, and aged appearance","type":"exact"}],"termid":"MONDO:0009545","xrefs":{"Monarch":{"xref_id":"0009545"}}}


id: PBO:0056117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYR motif containing 2","termid":"PBO:0056117"}


id: PBO:0066081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 9","termid":"PBO:0066081"}


id: GO:0098508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The generation of hematopoietic stem cells from hemogenic endothelial cells by a process that includes tight-junction dissolution and loss of cell polarity followed by delamination from the endothelium.","definition_xrefs":["PMID:20154732","PMID:22521721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"is_a","term_name":"delamination","termid":"GO:0060232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"endothelial to hematopoietic transition","termid":"GO:0098508"}


id: GO:0098817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that leads to a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell induced by the evoked release of many vesicles of excitatory neurotransmitter at the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"excitatory postsynaptic potential","termid":"GO:0060079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"evoked excitatory postsynaptic potential","termid":"GO:0098817"}


id: FYPO:0007040
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alkaline phosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phosphatase activity","termid":"FYPO:0004302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abnormal alkaline phosphatase activity","termid":"FYPO:0007040"}


id: MONDO:0007159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arthrogryposis-like hand anomaly-sensorineural deafness syndrome is characterized by an arthrogryposis-like hand anomaly and sensorineural deafness. It has been described in only one family. Male-to-male transmission was observed.","definition_xrefs":["Orphanet:1144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis-like hand anomaly-sensorineural deafness syndrome","secondary_identifiers":["OMIM:108200","GARD:784","SCTID:720515009","UMLS:C1862471","DOID:0111609","MEDGEN:350677","MESH:C535386"],"synonyms":[{"name":"DA6","type":"related"},{"name":"arthrogryposis and sensorineural deafness","type":"related"},{"name":"arthrogryposis, distal, type 6","type":"related"},{"name":"arthrogryposis-like hand anomaly and sensorineural deafness","type":"related"},{"name":"distal arthrogryposis type 6","type":"exact"},{"name":"familial hand abnormality and sensori-neural deafness","type":"related"}],"termid":"MONDO:0007159","xrefs":{"Monarch":{"xref_id":"0007159"}}}


id: PBO:0050038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 6 (pseudogene)","termid":"PBO:0050038"}


id: MONDO:0001653
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the prepuce.","direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system cancer","termid":"MONDO:0002149"},{"relation_name":"is_a","term_name":"skin cancer","termid":"MONDO:0002898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"prepuce cancer","secondary_identifiers":["DOID:13168","SCTID:363450006","UMLS:C0153598","ICD9:187.1","MEDGEN:509336"],"synonyms":[{"name":"cancer of prepuce","type":"exact"},{"name":"malignant neoplasm of foreskin","type":"exact"},{"name":"malignant neoplasm of prepuce","type":"exact"},{"name":"malignant prepuce neoplasm","type":"exact"},{"name":"malignant tumor of foreskin","type":"exact"},{"name":"malignant tumour of foreskin","type":"exact"},{"name":"prepuce cancer","type":"exact"}],"termid":"MONDO:0001653","xrefs":{"Monarch":{"xref_id":"0001653"}}}


id: PBO:0067148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 198, pseudogene","termid":"PBO:0067148"}


id: PBO:0082247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of the capping protein heterodimer (Cap1p and Cap2p); capping protein (CP) binds to the barbed ends of actin filaments preventing further polymerization; localized predominantly to cortical actin patches; protein increases in abundance and relocalizes from bud neck to plasma membrane upon DNA replication stress","termid":"PBO:0082247"}


id: PBO:0047623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fidgetin like 2","termid":"PBO:0047623"}


id: GO:0019840
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid binding","termid":"GO:0008289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"isoprenoid binding","termid":"GO:0019840"}


id: MONDO:0014174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any renal-hepatic-pancreatic dysplasia in which the cause of the disease is a mutation in the NEK8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal-hepatic-pancreatic dysplasia","termid":"MONDO:0017417"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal-hepatic-pancreatic dysplasia 2","secondary_identifiers":["OMIM:615415","GARD:18432","MEDGEN:815764","UMLS:C3809434"],"synonyms":[{"name":"NEK8 renal-hepatic-pancreatic dysplasia","type":"exact"},{"name":"RHPD2","type":"related"},{"name":"renal-hepatic-pancreatic dysplasia 2","type":"exact"},{"name":"renal-hepatic-pancreatic dysplasia caused by mutation in NEK8","type":"exact"},{"name":"renal-hepatic-pancreatic dysplasia type 2","type":"exact"}],"termid":"MONDO:0014174","xrefs":{"Monarch":{"xref_id":"0014174"}}}


id: PBO:0044330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 11","termid":"PBO:0044330"}


id: PBO:0061730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear RNA export factor 3","termid":"PBO:0061730"}


id: PBO:0073265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 9","termid":"PBO:0073265"}


id: PBO:0036392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane transporter Mfs3","termid":"PBO:0036392"}


id: GO:1905615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of developmental vegetative growth.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:11606552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"regulation of developmental vegetative growth","termid":"GO:1905613"},{"relation_name":"positively_regulates","term_name":"developmental vegetative growth","termid":"GO:0080186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of developmental vegetative growth","synonyms":[{"name":"activation of developmental vegetative growth","type":"narrow"},{"name":"up regulation of developmental vegetative growth","type":"exact"},{"name":"up-regulation of developmental vegetative growth","type":"exact"},{"name":"upregulation of developmental vegetative growth","type":"exact"}],"termid":"GO:1905615"}


id: PBO:0069085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 332, pseudogene","termid":"PBO:0069085"}


id: PBO:0052928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 19-11, pseudogene","termid":"PBO:0052928"}


id: PBO:0048854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A1","termid":"PBO:0048854"}


id: PBO:0039325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachidonate 12-lipoxygenase pseudogene 2","termid":"PBO:0039325"}


id: GO:1990321
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XXII) chains; type XXII collagen triple helices acts as a cell adhesion ligand for skin epithelial cells and fibroblasts.","definition_xrefs":["GOC:bhm","PMID:17876790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FACIT collagen trimer","termid":"GO:0005593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type XXII trimer","termid":"GO:1990321"}


id: PBO:0050576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate-glucosamine 3-sulfotransferase 1","termid":"PBO:0050576"}


id: PBO:0003651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"random septum position protein Rsp1","termid":"PBO:0003651"}


id: PBO:0064419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNN antisense RNA 1","termid":"PBO:0064419"}


id: MOD:01046
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 3'-chloro-L-tyrosine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monochlorinated L-tyrosine","termid":"MOD:01028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-chloro-L-tyrosine","synonyms":[{"name":"3'-ClTyr","type":"exact"}],"termid":"MOD:01046"}


id: GO:1903279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of calcium:sodium antiporter activity.","definition_xrefs":["GO_REF:0000059","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:rl","PMID:19683723","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of calcium:sodium antiporter activity (obsolete GO:1903279)","synonyms":[{"name":"regulation of mitochondrial sodium/calcium ion exchange","type":"related"},{"name":"regulation of sodium/calcium exchanger","type":"exact"},{"name":"regulation of sodium:calcium exchange","type":"related"}],"termid":"GO:1903279"}


id: GO:0001507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of acetylcholine that occurs in the synaptic cleft during synaptic transmission.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylcholine catabolic process","termid":"GO:0006581"},{"relation_name":"part_of","term_name":"synaptic transmission, cholinergic","termid":"GO:0007271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"acetylcholine catabolic process in synaptic cleft","synonyms":[{"name":"acetylcholine breakdown in synaptic cleft","type":"exact"},{"name":"acetylcholine degradation in synaptic cleft","type":"exact"}],"termid":"GO:0001507"}


id: PBO:0027364
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_DNA_damage_during_mitotic_S_phase","termid":"PBO:0027364"}


id: PBO:0079176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 5, pseudogene","termid":"PBO:0079176"}


id: GO:0141180
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A chromatin-protein adaptor activity that bridges dsDNA and chromatin proteins to bring regions of a chromosome in proximity. The DNA:DNA:RNA triple-helical structure is formed non-Watson-Crick base-pairing.","definition_xrefs":["PMID:35412350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin-protein adaptor activity","termid":"GO:0140463"},{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0060090","GO:0003677","GO:0030674","GO:0003674"],"is_obsolete":false,"name":"dsDNA-RNA triple helix-forming chromatin adaptor activity","termid":"GO:0141180"}


id: GO:0097218
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A part of the cell wall of a sieve tube member that bears one or more highly specialized sieve areas.","definition_xrefs":["POC:curators","ISBN:0471738433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plant-type cell wall","termid":"GO:0009505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"sieve plate","termid":"GO:0097218"}


id: PBO:0057897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3199-2","termid":"PBO:0057897"}


id: MONDO:0009586
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mesangial sclerosis, diffuse renal, with ocular abnormalities (obsolete MONDO:0009586)","termid":"MONDO:0009586","xrefs":{"Monarch":{"xref_id":"0009586"}}}


id: PBO:0030646
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_rate_at_high_pH","termid":"PBO:0030646"}


id: PR:P17608
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ryh1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P17608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein ryh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4C5.02c","synonyms":[{"name":"Spom972h-ryh1","type":"exact"}],"termid":"PR:P17608"}


id: PBO:0043528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coenzyme A synthase","termid":"PBO:0043528"}


id: PBO:0091731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromeric small non-coding RNA","termid":"PBO:0091731"}


id: GO:0009398
data:
  {"annotated_genes":["SJAG_04845"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115226],"is_not":false,"summary":null,"term":"GO:0009398"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of FMN, the oxidized form of flavin mononucleotide (riboflavin 5'-(dihydrogen phosphate)), which acts as a coenzyme for a number of oxidative enzymes including NADH dehydrogenase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside monophosphate biosynthetic process","termid":"GO:0009156"},{"relation_name":"is_a","term_name":"ribonucleotide biosynthetic process","termid":"GO:0009260"},{"relation_name":"is_a","term_name":"flavin-containing compound biosynthetic process","termid":"GO:0042727"},{"relation_name":"is_a","term_name":"FMN metabolic process","termid":"GO:0046444"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"FMN biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"FMN anabolism","type":"exact"},{"name":"FMN biosynthesis","type":"exact"},{"name":"FMN formation","type":"exact"},{"name":"FMN synthesis","type":"exact"}],"termid":"GO:0009398","terms_by_termid":{"GO:0009398":null}}


id: PBO:0113126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of Dam1 complex (aka DASH complex); complex couples kinetochores to force produced by MT depolymerization thereby aiding in chromosome segregation; also localized to nuclear side of spindle pole body; SPC19 mRNA level is reduced when downstream gene RAV2 is deleted","termid":"PBO:0113126"}


id: PBO:0039730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein C1 pseudogene 1","termid":"PBO:0039730"}


id: MONDO:0011659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"visceral heterotaxy","termid":"MONDO:0018677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotaxy, visceral, 3, autosomal","secondary_identifiers":["OMIM:606325","UMLS:C1853444","MEDGEN:339983","MESH:C565237"],"synonyms":[{"name":"HTX3","type":"exact"},{"name":"heterotaxy, visceral, 3, autosomal","type":"exact"}],"termid":"MONDO:0011659","xrefs":{"Monarch":{"xref_id":"0011659"}}}


id: GO:0002207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The somatic process in which immunoglobulin genes are diversified through the mechanism of gene conversion following the induction of and contributing to an immune response.","definition_xrefs":["PMID:14991701","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene conversion of immunoglobulin genes","termid":"GO:0002206"},{"relation_name":"is_a","term_name":"somatic diversification of immunoglobulins involved in immune response","termid":"GO:0002208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"gene conversion of immunoglobulin genes involved in immune response","synonyms":[{"name":"gene conversion of antibody genes during immune response","type":"related"},{"name":"gene conversion of immunoglobulin genes during immune response","type":"related"}],"termid":"GO:0002207"}


id: PBO:0077115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 23 homolog B","termid":"PBO:0077115"}


id: SO:0000349
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match against a protein sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"match","termid":"SO:0000343"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein_match","synonyms":[{"name":"protein match","type":"exact"}],"termid":"SO:0000349"}


id: PBO:0111896
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin bimC subfamily","termid":"PBO:0111896"}


id: PBO:0044129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 15","termid":"PBO:0044129"}


id: PBO:0089819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARP complex subunit Vps52","termid":"PBO:0089819"}


id: GO:0003392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix that contributes to the process of retrograde extension.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion","termid":"GO:0007155"},{"relation_name":"part_of","term_name":"retrograde extension","termid":"GO:0003389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell adhesion involved in retrograde extension","termid":"GO:0003392"}


id: PBO:0012831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp40","termid":"PBO:0012831"}


id: PBO:0053051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARP7 pseudogene 2","termid":"PBO:0053051"}


id: MONDO:0021809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disorders of the autonomic nervous system occurring as a primary condition. Manifestations can involve any or all body systems but commonly affect the blood pressure and heart rate.","definition_xrefs":["MESH:D054969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysautonomia","termid":"MONDO:0044872"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary dysautonomia","synonyms":[{"name":"Dysautonomias","type":"related"},{"name":"Dysautonomias, primary","type":"related"},{"name":"dysautonomia","type":"related"},{"name":"dysautonomia, primary","type":"related"},{"name":"primary dysautonomia","type":"exact"}],"termid":"MONDO:0021809","xrefs":{"Monarch":{"xref_id":"0021809"}}}


id: GO:0004103
data:
  {"annotated_genes":["SJAG_01918"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88282],"is_not":false,"summary":null,"term":"GO:0004103"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + choline = ADP + choline phosphate + 2 H+.","definition_xrefs":["RHEA:12837","EC:2.7.1.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01918":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"choline kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:CHOLINE-KINASE-RXN","KEGG_REACTION:R01021","Reactome:R-HSA-1483004"],"synonyms":[{"name":"ATP:choline phosphotransferase activity","type":"related"},{"name":"choline kinase (phosphorylating)","type":"related"},{"name":"choline phosphokinase activity","type":"related"},{"name":"choline-ethanolamine kinase activity","type":"related"}],"termid":"GO:0004103","terms_by_termid":{"GO:0004103":null}}


id: PBO:0032711
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_error-free_translesion_synthesis_of_cyclobutane_pyrimidine_dimers","termid":"PBO:0032711"}


id: PBO:0057194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR365B and MIR4725 host gene","termid":"PBO:0057194"}


id: GO:1901722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell proliferation involved in kidney development.","definition_xrefs":["GOC:TermGenie","PMID:18182616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"cell proliferation involved in kidney development","termid":"GO:0072111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation involved in kidney development","termid":"GO:1901722"}


id: GO:0001175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the selection of the specific location within the template strand of an RNA polymerase III promoter for hybridization of the cognate ribonucleotides and formation of first phosphodiester bond within the nascent transcript.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcriptional start site selection","termid":"GO:0001173"},{"relation_name":"part_of","term_name":"transcription initiation at RNA polymerase III promoter","termid":"GO:0006384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"transcriptional start site selection at RNA polymerase III promoter","termid":"GO:0001175"}


id: GO:1905289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of CAMKK-AMPK signaling cascade.","definition_xrefs":["PMID:22128786","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium-mediated signaling","termid":"GO:0050848"},{"relation_name":"regulates","term_name":"CAMKK-AMPK signaling cascade","termid":"GO:0061762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of CAMKK-AMPK signaling cascade","synonyms":[{"name":"regulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"}],"termid":"GO:1905289"}


id: MONDO:1010328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinoschisis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal degeneration, non-human animal","termid":"MONDO:1010326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoschisis, non-human animal","secondary_identifiers":["OMIA:001185"],"termid":"MONDO:1010328","xrefs":{"Monarch":{"xref_id":"1010328"}}}


id: GO:0004783
data:
  {"annotated_genes":["SJAG_05027","SJAG_01693"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87246,116980],"is_not":false,"summary":null,"term":"GO:0004783"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hydrogen sulfide + 3 NADP+ + 3 H2O = sulfite + 3 NADPH + 3 H+.","definition_xrefs":["RHEA:13801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfite reductase activity","termid":"GO:0016002"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01693":null,"SJAG_05027":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"sulfite reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:SULFITE-REDUCT-RXN","EC:1.8.1.2"],"synonyms":[{"name":"H2S-NADP oxidoreductase activity","type":"related"},{"name":"NADPH-dependent sulfite reductase activity","type":"related"},{"name":"NADPH-sulfite reductase activity","type":"related"},{"name":"NADPH:sulfite reductase flavoprotein","type":"related"},{"name":"hydrogen-sulfide:NADP+ oxidoreductase activity","type":"related"},{"name":"sulfite (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"related"},{"name":"sulphite reductase (NADPH) activity","type":"exact"}],"termid":"GO:0004783","terms_by_termid":{"GO:0004783":null}}


id: GO:0000146
data:
  {"annotated_genes":["SJAG_03011","SJAG_04001","SJAG_03703","SJAG_00938","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97146,102765,107627,115684,117385],"is_not":false,"summary":null,"term":"GO:0000146"}]},"cv_name":"molecular_function","definition":"A motor activity that generates movement along a microfilament, driven by ATP hydrolysis.","definition_xrefs":["PMID:29716949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal motor activity","termid":"GO:0003774"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_02431":null,"SJAG_03011":null,"SJAG_03703":null,"SJAG_04001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003774"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003774"],"is_obsolete":false,"name":"microfilament motor activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0030898","EC:5.6.1.8","Reactome:R-HSA-432237","Reactome:R-HSA-2316352","Reactome:R-HSA-9023171"],"synonyms":[{"name":"actin filament motor activity","type":"exact"},{"name":"actin-activated ATPase activity","type":"exact"},{"name":"actin-dependent ATPase activity","type":"exact"},{"name":"actin-filament motor activity","type":"exact"},{"name":"muscle motor activity","type":"narrow"},{"name":"myosin ATPase activity","type":"related"}],"termid":"GO:0000146","terms_by_termid":{"GO:0000146":null}}


id: SO:0001722
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 36th residue (a lysine), from the start of the H3 histone protein is mono-methylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3K36_methylation_site","termid":"SO:0001733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K36_monomethylation_site","synonyms":[{"name":"H3K36 mono-methylation site","type":"exact"},{"name":"H3K36Me1","type":"related"}],"termid":"SO:0001722"}


id: PBO:0057160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 302e","termid":"PBO:0057160"}


id: MONDO:0002784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete craniopharyngioma (obsolete MONDO:0002784)","termid":"MONDO:0002784","xrefs":{"Monarch":{"xref_id":"0002784"}}}


id: FYPO:0001342
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects a response to a stimulus in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype","termid":"FYPO:0000298"},{"relation_name":"is_a","term_name":"cellular process phenotype during vegetative growth","termid":"FYPO:0001331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000298","FYPO:0000002"],"is_obsolete":false,"name":"cellular response phenotype during vegetative growth","synonyms":[{"name":"cellular response phenotype during mitotic cell cycle","type":"related"},{"name":"fission yeast cellular response phenotype during vegetative growth","type":"exact"}],"termid":"FYPO:0001342"}


id: SO:0000368
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The junction in a genome where a transposable_element has inserted.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insertion_site","termid":"SO:0000366"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposable_element_insertion_site","synonyms":[{"name":"transposable element insertion site","type":"exact"}],"termid":"SO:0000368"}


id: PBO:0085419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; exports copper; has broad substrate specificity and can transport many mono- and divalent cations; transports a variety of drugs and is required for resistance to quinidine, barban, cisplatin, and bleomycin; contributes to potassium homeostasis; expression is regulated by copper","termid":"PBO:0085419"}


id: GO:0035612
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an AP-2 adaptor complex. The AP-2 adaptor complex is a heterotetrameric AP-type membrane coat adaptor complex that consists of alpha, beta2, mu2 and sigma2 subunits and links clathrin to the membrane surface of a vesicle. In at least humans, the AP-2 complex can be heterogeneric due to the existence of multiple subunit isoforms encoded by different alpha genes (alphaA and alphaC).","definition_xrefs":["PMID:12221107","PMID:15728179","GOC:BHF","PMID:21097499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"AP-2 adaptor complex binding","synonyms":[{"name":"AP-2 clathrin adaptor complex binding","type":"related"}],"termid":"GO:0035612"}


id: PBO:0048079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain","termid":"PBO:0048079"}


id: PBO:0042712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin EGF LAG seven-pass G-type receptor 3","termid":"PBO:0042712"}


id: PBO:0080719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WSC domain containing 1","termid":"PBO:0080719"}


id: PBO:0074952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 113-3","termid":"PBO:0074952"}


id: MONDO:0010397
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An X-linked recessive condition caused by mutation(s) in the MECP2 gene, encoding methyl-CpG-binding protein 2. It is characterized by severe neonatal encephalopathy.","definition_xrefs":["NCIT:C132293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"is_a","term_name":"neonatal epilepsy syndrome","termid":"MONDO:0020070"},{"relation_name":"is_a","term_name":"Mendelian encephalopathy","termid":"MONDO:0100198"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"severe neonatal-onset encephalopathy with microcephaly","secondary_identifiers":["MEDGEN:409616","icd11.foundation:240602582","OMIM:300673","UMLS:C1968556","GARD:17103","DOID:0111932","Orphanet:209370","MESH:C566878"],"synonyms":[{"name":"encephalopathy, neonatal severe, X-linked recessive","type":"exact"},{"name":"encephalopathy, neonatal severe, due to MECP2 mutations","type":"related"},{"name":"severe congenital encephalopathy due to MECP2 mutation","type":"exact"},{"name":"severe neonatal encephalopathy due to MECP2 mutations","type":"exact"}],"termid":"MONDO:0010397","xrefs":{"Monarch":{"xref_id":"0010397"}}}


id: GO:0034406
data:
  {"annotated_genes":["SJAG_00876","SJAG_03123","SJAG_01835","SJAG_04666","SJAG_01290","SJAG_04483","SJAG_02192","SJAG_01787","SJAG_01255","SJAG_05285","SJAG_04771","SJAG_04462","SJAG_03705","SJAG_01453","SJAG_01171","SJAG_01288","SJAG_04668","SJAG_00218","SJAG_02222","SJAG_03587","SJAG_05001","SJAG_03646","SJAG_00610","SJAG_04659"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[108790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[91079,115316,87544,105592,91068,108792,107264,112657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[108101,102143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[101444,94586,107555,101443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070879"},{"annotations":[86996,91904],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[90251,102346,91906,104837,91888,117533,105406,117408],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-glucans, compounds composed of glucose residues linked by beta-D-glucosidic bonds, found in the walls of cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide metabolic process","termid":"GO:0010383"},{"relation_name":"is_a","term_name":"beta-glucan metabolic process","termid":"GO:0051273"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01171":null,"SJAG_01255":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02192":null,"SJAG_02222":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03646":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05001":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"cell wall beta-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell wall beta-glucan metabolism","type":"exact"}],"termid":"GO:0034406","terms_by_termid":{"GO:0034412":null,"GO:0034413":null,"GO:0070879":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: PBO:0052919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 19-2","termid":"PBO:0052919"}


id: PBO:0036009
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_tyrosine_phosphorylation_during_vegetative_growth","termid":"PBO:0036009"}


id: MONDO:0018791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare cerebral vasculopathy characterized by a progressive stenosis of the terminal portion of the internal carotid arteries and the development of abnormal collateral vessels.","definition_xrefs":["PMID:32089044"],"gene_count":0,"genotype_count":0,"name":"obsolete Moyomoya angiopathy (obsolete MONDO:0018791)","secondary_identifiers":["Orphanet:477768"],"termid":"MONDO:0018791","xrefs":{"Monarch":{"xref_id":"0018791"}}}


id: MOD:00277
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to 5-methyl-L-arginine.","definition_xrefs":["PubMed:9367957","PubMed:11875433","PubMed:10660523","RESID:AA0272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated L-arginine","termid":"MOD:00414"},{"relation_name":"is_a","term_name":"C-methylated residue","termid":"MOD:00656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"5-methyl-L-arginine","synonyms":[{"name":"(2S,5S)-2-amino-5-carbamimidamidohexanoic acid","type":"exact"},{"name":"2-amino-5-guanidinohexanoic acid","type":"exact"},{"name":"4-methylarginine","type":"related"},{"name":"5-methyl-L-arginine","type":"exact"},{"name":"5-methylated L-arginine","type":"exact"},{"name":"C5Me1Arg","type":"exact"},{"name":"MOD_RES 5-methylarginine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"delta-methylarginine","type":"exact"}],"termid":"MOD:00277"}


id: MONDO:0043459
data:
  {"annotated_genes":["SJAG_01207","SJAG_00995","SJAG_03206"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011125"},{"annotations":[84781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014615"},{"annotations":[84782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014619"}]},"cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder which results from exposure to radiation. Examples of non-neoplastic disorders include dermatitis, enteritis, stomatitis, pneumonitis, and cerebritis. Examples of neoplastic disorders include myelodysplastic syndromes, leukemias, and sarcomas.","definition_xrefs":["NCIT:C26684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00995":null,"SJAG_01207":null,"SJAG_03206":null},"genotype_count":0,"is_obsolete":false,"name":"radiation-induced disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:734320","MESH:D000016","Orphanet:521132","EFO:0009565","SCTID:85983004","GARD:22139","UMLS:C1527225"],"synonyms":[{"name":"Abnormality, radiation-induced","type":"related"},{"name":"abnormalities, radiation induced","type":"related"},{"name":"radiation induced abnormalities","type":"related"},{"name":"radiation-induced Abnormality","type":"exact"},{"name":"radiation-induced abnormalities","type":"exact"},{"name":"radiation-induced disorder","type":"exact"}],"termid":"MONDO:0043459","terms_by_termid":{"MONDO:0011125":null,"MONDO:0014615":null,"MONDO:0014619":null},"xrefs":{"Monarch":{"xref_id":"0043459"}}}


id: PBO:0084841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; appears as two protein spots (YmL34 and YmL38) on two-dimensional SDS gels; protein abundance increases in response to DNA replication stress","termid":"PBO:0084841"}


id: GO:0097107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a postsynaptic density, a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse.","definition_xrefs":["GOC:BHF","PMID:21525273","GOC:sjp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic density organization","termid":"GO:0097106"},{"relation_name":"is_a","term_name":"postsynaptic specialization assembly","termid":"GO:0098698"},{"relation_name":"part_of","term_name":"excitatory synapse assembly","termid":"GO:1904861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"postsynaptic density assembly","synonyms":[{"name":"PSD assembly","type":"exact"},{"name":"post synaptic density assembly","type":"exact"},{"name":"post-synaptic density assembly","type":"exact"}],"termid":"GO:0097107"}


id: GO:0099564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates synaptic transmission via modification of the structure of the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification of synaptic structure","termid":"GO:0099563"},{"relation_name":"regulates","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"modification of synaptic structure, modulating synaptic transmission","termid":"GO:0099564"}


id: GO:0099190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of spectrin-associated cytoskeleton and associated proteins in the postsynapse.","definition_xrefs":["GOC:dos","PMID:28576936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic cytoskeleton organization","termid":"GO:0099188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007010"],"is_obsolete":false,"name":"postsynaptic spectrin-associated cytoskeleton organization","termid":"GO:0099190"}


id: PBO:0067528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 672, pseudogene","termid":"PBO:0067528"}


id: MONDO:1011527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hepatic lipidosis that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatic lipidosis, non-human animal","termid":"MONDO:1011429"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatic lipidosis, domestic cat","secondary_identifiers":["OMIA:000548-9685","OMIA:000605-9685"],"termid":"MONDO:1011527","xrefs":{"Monarch":{"xref_id":"1011527"}}}


id: MONDO:0008765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Leber congenital amaurosis in which the cause of the disease is a mutation in the RPE65 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Leber congenital amaurosis","termid":"MONDO:0018998"},{"relation_name":"is_a","term_name":"RPE65-related recessive retinopathy","termid":"MONDO:0100368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005328","MONDO:0002320"],"is_obsolete":false,"name":"Leber congenital amaurosis 2","secondary_identifiers":["UMLS:C1859844","MESH:C536601","GARD:636","DOID:0110016","ICD10CM:H35.5","MEDGEN:348473","OMIM:204100"],"synonyms":[{"name":"LCA2","type":"exact"},{"name":"Leber congenital amaurosis 2","type":"exact"},{"name":"Leber congenital amaurosis caused by mutation in RPE65","type":"exact"},{"name":"Leber congenital amaurosis type 2","type":"exact"},{"name":"RPE65 Leber congenital amaurosis","type":"exact"},{"name":"amaurosis congenita of Leber 2","type":"related"},{"name":"amaurosis congenita of Leber II","type":"exact"},{"name":"amaurosis congenita of Leber, type 2","type":"related"}],"termid":"MONDO:0008765","xrefs":{"Monarch":{"xref_id":"0008765"}}}


id: PBO:0002943
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.2.14","termid":"PBO:0002943"}


id: MONDO:0003814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gastric diffuse adenocarcinoma (obsolete MONDO:0003814)","termid":"MONDO:0003814","xrefs":{"Monarch":{"xref_id":"0003814"}}}


id: PBO:0065861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB18, member RAS oncogene family","termid":"PBO:0065861"}


id: GO:0102884
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = zingiberene + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:4.2.3.65"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"alpha-zingiberene synthase activity","secondary_identifiers":["MetaCyc:RXN-8425","RHEA:28643"],"termid":"GO:0102884"}


id: PR:O94443
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC637.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized exonuclease C637.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC637.09","synonyms":[{"name":"Spom972h-SPAC637.09","type":"exact"}],"termid":"PR:O94443"}


id: PBO:0109816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER to Golgi ceramide transport protein, lipocalin superfamily Svf2","termid":"PBO:0109816"}


id: PBO:0059613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 25","termid":"PBO:0059613"}


id: PBO:0060888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroepithelial cell transforming 1","termid":"PBO:0060888"}


id: PBO:0072724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor like tyrosine kinase","termid":"PBO:0072724"}


id: MONDO:0017653
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epilepsy and/or ataxia with myoclonus as major feature (obsolete MONDO:0017653)","secondary_identifiers":["Orphanet:306756"],"termid":"MONDO:0017653","xrefs":{"Monarch":{"xref_id":"0017653"}}}


id: PBO:0073540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing ring finger 2","termid":"PBO:0073540"}


id: MONDO:0006826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome produced by severe protein deficiency, characterized by retarded growth, changes in skin and hair pigment, edema, and pathologic changes in the liver, including fatty infiltration, necrosis, and fibrosis. The word is a local name in Gold Coast, Africa, meaning 'displaced child'. Although first reported from Africa, kwashiorkor is now known throughout the world, but mainly in the tropics and subtropics. It is considered to be related to marasmus. (From Dorland, 27th ed)","definition_xrefs":["MESH:D007732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-energy malnutrition","termid":"MONDO:0001371"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kwashiorkor","secondary_identifiers":["ICD9:260","SCTID:58262005","ICD10CM:E40","EFO:1001009","icd11.foundation:1656486805","MedDRA:10023504","DOID:13579","UMLS:C0022806","MEDGEN:7233"],"synonyms":[{"name":"Kwashiokor","type":"exact"},{"name":"nutritional edema with dyspigmentation of skin and hair","type":"exact"},{"name":"nutritional edema with dyspigmentation of skin and/or hair","type":"exact"},{"name":"nutritional oedema with dyspigmentation of skin and hair","type":"exact"},{"name":"nutritional oedema with dyspigmentation of skin and/or hair","type":"exact"}],"termid":"MONDO:0006826","xrefs":{"Monarch":{"xref_id":"0006826"}}}


id: PBO:0056008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated","termid":"PBO:0056008"}


id: PBO:0089725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c1 Cyt1","termid":"PBO:0089725"}


id: PBO:0059805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 31","termid":"PBO:0059805"}


id: PBO:0071193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 34","termid":"PBO:0071193"}


id: PBO:0002100
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.2.1.-","termid":"PBO:0002100"}


id: FYPO:0001453
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of ethanol than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0002682"],"is_obsolete":false,"name":"resistance to ethanol","synonyms":[{"name":"resistance to ethanol during mitotic cell cycle","type":"related"},{"name":"resistance to ethanol during vegetative growth","type":"exact"},{"name":"resistance to ethyl alcohol","type":"exact"},{"name":"resistant to ethanol","type":"exact"}],"termid":"FYPO:0001453"}


id: PBO:0049589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 7","termid":"PBO:0049589"}


id: FYPO:0003088
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA replication","termid":"FYPO:0000217"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000293","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal replication fork arrest","synonyms":[{"name":"abnormal replication fork arrest during mitotic cell cycle","type":"related"},{"name":"abnormal replication fork arrest during vegetative growth","type":"exact"}],"termid":"FYPO:0003088"}


id: MONDO:0003930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stage 0 includes: 0a (Ta, N0, M0); 0is (Tis, N0, M0). Ta: Noninvasive papillary carcinoma. Tis: Carcinoma in situ: \\\"flat tumor\\\". N0: No regional lymph node metastasis. M0: No distant metastasis. (AJCC 6th and 7th eds.)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bladder transitional cell carcinoma","termid":"MONDO:0005611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"non-invasive bladder urothelial carcinoma","secondary_identifiers":["MEDGEN:233466","NCIT:C6188","DOID:6571","UMLS:C1336089"],"synonyms":[{"name":"non-invasive bladder urothelial carcinoma","type":"exact"},{"name":"stage 0 bladder urothelial cancer","type":"exact"},{"name":"stage 0 bladder urothelial carcinoma","type":"exact"},{"name":"stage 0 bladder urothelial carcinoma aJCC v6","type":"exact"},{"name":"stage 0 bladder urothelial carcinoma aJCC v6 and v7","type":"exact"},{"name":"stage 0 bladder urothelial carcinoma aJCC v7","type":"exact"},{"name":"stage 0 transitional cell carcinoma of bladder","type":"exact"},{"name":"stage 0 transitional cell carcinoma of the bladder","type":"exact"},{"name":"stage 0 transitional cell carcinoma of the urinary bladder","type":"exact"},{"name":"stage 0 transitional cell carcinoma of urinary bladder","type":"exact"},{"name":"stage 0 urinary bladder transitional cell carcinoma","type":"exact"}],"termid":"MONDO:0003930","xrefs":{"Monarch":{"xref_id":"0003930"}}}


id: PBO:0040617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 antagonist/killer 1 pseudogene 2","termid":"PBO:0040617"}


id: PBO:0061840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"8-oxoguanine DNA glycosylase","termid":"PBO:0061840"}


id: PBO:0077679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF superfamily member 10","termid":"PBO:0077679"}


id: MONDO:0012396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Exercise-induced hyperinsulinism (EIHI) is a form of diazoxide-sensitive diffuse hyperinsulinism (DHI) characterized by episodes of hypoglycemia induced by exercise due to an inappropriate lactate and pyruvate sensitivity in pancreatic beta-cells.","definition_xrefs":["Orphanet:165991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diazoxide-sensitive diffuse hyperinsulinism","termid":"MONDO:0015624"},{"relation_name":"is_a","term_name":"disorder of carbohydrate transmembrane transport and absorption","termid":"MONDO:0017706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"exercise-induced hyperinsulinism","secondary_identifiers":["UMLS:C1864902","MEDGEN:351246","DOID:0070214","SCTID:715830008","icd11.foundation:999935139","OMIM:610021","GARD:9932","NCIT:C131839","MESH:C538376"],"synonyms":[{"name":"EIHI","type":"exact"},{"name":"HHF7","type":"related"},{"name":"MCT1 hyperinsulinism","type":"exact"},{"name":"exercise induced hyperinsulinemic hypoglycemia","type":"related"},{"name":"exercise-induced hyperinsulinemic hypoglycemia","type":"exact"},{"name":"hyperinsulinemic hypoglycemia exercise-induced","type":"related"},{"name":"hyperinsulinemic hypoglycemia familial 7","type":"related"},{"name":"hyperinsulinemic hypoglycemia, exercise-induced","type":"related"},{"name":"hyperinsulinemic hypoglycemia, familial, 7","type":"related"},{"name":"hyperinsulinemic hypoglycemia, familial, type 7","type":"exact"},{"name":"hyperinsulinism due to SLC16A1 deficiency","type":"exact"},{"name":"hyperinsulinism due to monocarboxylate transporter 1 deficiency","type":"exact"},{"name":"monocarboxylate transporter 1 hyperinsulinism","type":"exact"}],"termid":"MONDO:0012396","xrefs":{"Monarch":{"xref_id":"0012396"}}}


id: FYPO:0000749
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to selenite ((SeO3)2-) ions. Cells stop growing (and may die) at a concentration of selenite ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to selenite ion","synonyms":[{"name":"hypersensitive to selenite ion","type":"exact"},{"name":"sensitive to selenite ion during mitotic cell cycle","type":"related"},{"name":"sensitive to selenite ion during vegetative growth","type":"exact"},{"name":"sensitive to selenite ions","type":"exact"},{"name":"sensitive to selenium","type":"related"}],"termid":"FYPO:0000749"}


id: MONDO:0014161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial vesicoureteral reflux","termid":"MONDO:0017329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicoureteral reflux 7","secondary_identifiers":["UMLS:C3809337","OMIM:615390","MEDGEN:815667","GARD:18424"],"synonyms":[{"name":"VUR7","type":"exact"},{"name":"vesicoureteral reflux 7","type":"exact"}],"termid":"MONDO:0014161","xrefs":{"Monarch":{"xref_id":"0014161"}}}


id: PBO:0055768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lunapark, ER junction formation factor","termid":"PBO:0055768"}


id: PBO:0062979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PABPN1 pseudogene 1","termid":"PBO:0062979"}


id: GO:1903976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glial cell migration.","definition_xrefs":["GOC:BHF","GOC:nc","GOC:TermGenie","GO_REF:0000058","PMID:19100238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"regulation of glial cell migration","termid":"GO:1903975"},{"relation_name":"negatively_regulates","term_name":"glial cell migration","termid":"GO:0008347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glial cell migration","synonyms":[{"name":"down regulation of glia cell migration","type":"exact"},{"name":"down regulation of glial cell migration","type":"exact"},{"name":"down-regulation of glia cell migration","type":"exact"},{"name":"down-regulation of glial cell migration","type":"exact"},{"name":"downregulation of glia cell migration","type":"exact"},{"name":"downregulation of glial cell migration","type":"exact"},{"name":"inhibition of glia cell migration","type":"narrow"},{"name":"inhibition of glial cell migration","type":"narrow"},{"name":"negative regulation of glia cell migration","type":"exact"}],"termid":"GO:1903976"}


id: GO:0006823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of heavy metal ions into, out of or within a cell, or between cells. Heavy metals are those that can form a coordination bond with a protein, as opposed to an alkali or alkaline-earth metal that can only form an ionic bond; this definition includes the following biologically relevant heavy metals: Cd, Co, Cu, Fe, Hg, Mn, Mo, Ni, V, W, Zn.","definition_xrefs":["GOC:mah","GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete heavy metal ion transport (obsolete GO:0006823)","synonyms":[{"name":"heavy metal ion transport","type":"exact"}],"termid":"GO:0006823"}


id: GO:1901934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of bicyclogermacrene.","definition_xrefs":["PMID:22867794","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene biosynthetic process","termid":"GO:0051762"},{"relation_name":"is_a","term_name":"bicyclogermacrene metabolic process","termid":"GO:1901932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"bicyclogermacrene biosynthetic process","synonyms":[{"name":"bicyclogermacrene anabolism","type":"exact"},{"name":"bicyclogermacrene biosynthesis","type":"exact"},{"name":"bicyclogermacrene formation","type":"exact"},{"name":"bicyclogermacrene synthesis","type":"exact"}],"termid":"GO:1901934"}


id: GO:0070748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-35 receptor.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"interleukin-35 receptor binding","synonyms":[{"name":"IL-35","type":"narrow"},{"name":"interleukin-35 receptor ligand","type":"narrow"}],"termid":"GO:0070748"}


id: FYPO:0001975
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing nocodazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002060","FYPO:0002057","FYPO:0000139","FYPO:0000003","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on nocodazole","synonyms":[{"name":"normal cell population growth in presence of nocodazole","type":"exact"},{"name":"normal cell population growth on nocodazole","type":"exact"},{"name":"normal cellular response to nocodazole","type":"related"},{"name":"normal vegetative cell population growth on nocodazole","type":"exact"}],"termid":"FYPO:0001975"}


id: MONDO:0000821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0000821 (obsolete MONDO:0000821)","termid":"MONDO:0000821","xrefs":{"Monarch":{"xref_id":"0000821"}}}


id: GO:0019509
data:
  {"annotated_genes":["SJAG_03881","SJAG_02689","SJAG_01404","SJAG_02293","SJAG_03614","SJAG_00309"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89251,92141,98517,100154,106495,111919],"is_not":false,"summary":null,"term":"GO:0019509"}]},"cv_name":"biological_process","definition":"The generation of L-methionine (2-amino-4-(methylthio)butanoic acid) from methylthioadenosine.","definition_xrefs":["GOC:jl","MetaCyc:PWY-4361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine salvage","termid":"GO:0071267"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00309":null,"SJAG_01404":null,"SJAG_02293":null,"SJAG_02689":null,"SJAG_03614":null,"SJAG_03881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006790","GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-methionine salvage from methylthioadenosine","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1237112"],"synonyms":[{"name":"methionine recycling","type":"narrow"},{"name":"methionine regeneration","type":"narrow"},{"name":"methionine salvage from methylthioadenosine","type":"exact"},{"name":"methionine salvage pathway","type":"exact"}],"termid":"GO:0019509","terms_by_termid":{"GO:0019509":null}}


id: PBO:0075121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 170","termid":"PBO:0075121"}


id: PBO:0065573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin-endoperoxide synthase 1","termid":"PBO:0065573"}


id: PBO:0061205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nocturnin","termid":"PBO:0061205"}


id: FYPO:0002595
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone phosphorylation is normal. All histone phosphorylation may be assayed, or phosphorylation of specific sites on specific histones may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone modification during vegetative growth","termid":"FYPO:0002600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal histone phosphorylation during vegetative growth","synonyms":[{"name":"normal histone phosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002595"}


id: GO:0031320
data:
  {"annotated_genes":["SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046526"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hexitol + acceptor = hexose + reduced acceptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"hexitol dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031320","terms_by_termid":{"GO:0046526":null}}


id: GO:0031506
data:
  {"annotated_genes":["SJAG_01264","SJAG_02519","SJAG_04906","SJAG_03082","SJAG_04770","SJAG_01276","SJAG_01021","SJAG_00816","SJAG_00598"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97377,108506,104440,86981,104557,105452,117873,100261,104011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000032"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cell wall glycoproteins, any cell wall protein that contains covalently bound sugar residues.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"},{"relation_name":"is_a","term_name":"cell wall macromolecule metabolic process","termid":"GO:0044036"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00598":null,"SJAG_00816":null,"SJAG_01021":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_02519":null,"SJAG_03082":null,"SJAG_04770":null,"SJAG_04906":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"cell wall glycoprotein biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell wall glycoprotein anabolism","type":"exact"},{"name":"cell wall glycoprotein biosynthesis","type":"exact"},{"name":"cell wall glycoprotein formation","type":"exact"},{"name":"cell wall glycoprotein synthesis","type":"exact"}],"termid":"GO:0031506","terms_by_termid":{"GO:0000032":null}}


id: GO:0097676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of two methyl groups to lysine at position 36 of the histone.","definition_xrefs":["GOC:lb","PMID:21187428"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K36 dimethylation (obsolete GO:0097676)","termid":"GO:0097676"}


id: PBO:0064277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology, MyTH4 and FERM domain containing H3","termid":"PBO:0064277"}


id: GO:2001029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cellular glucuronidation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular glucuronidation (obsolete GO:2001029)","synonyms":[{"name":"regulation of cellular glucuronide biosynthesis","type":"exact"},{"name":"regulation of cellular glucuronide biosynthetic process","type":"exact"},{"name":"regulation of cellular glucuronoside biosynthesis","type":"exact"},{"name":"regulation of cellular glucuronoside biosynthetic process","type":"exact"}],"termid":"GO:2001029"}


id: PBO:0051224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable IGHV8-51-1 (non-functional)","termid":"PBO:0051224"}


id: MONDO:0024658
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant soft tissue neoplasm that arises from the extrahepatic bile ducts. Representative examples include Kaposi sarcoma, leiomyosarcoma, and rhabdomyosarcoma.","definition_xrefs":["NCIT:C5029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile duct sarcoma","termid":"MONDO:0002862"},{"relation_name":"is_a","term_name":"malignant tumor of extrahepatic bile duct","termid":"MONDO:0021321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"extrahepatic bile duct sarcoma","secondary_identifiers":["MEDGEN:473546","UMLS:C2205442"],"synonyms":[{"name":"extrahepatic bile duct sarcoma","type":"exact"},{"name":"sarcoma of extrahepatic bile duct","type":"exact"},{"name":"sarcoma of the extrahepatic bile duct","type":"exact"}],"termid":"MONDO:0024658","xrefs":{"Monarch":{"xref_id":"0024658"}}}


id: PBO:0065818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB4B-EGLN2 readthrough (NMD candidate)","termid":"PBO:0065818"}


id: PBO:0080390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting 25 homolog","termid":"PBO:0080390"}


id: MONDO:0006993
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Heart failure caused by abnormal myocardial contraction during systole leading to defective cardiac emptying.","definition_xrefs":["MESH:D054143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congestive heart failure","termid":"MONDO:0005009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"systolic heart failure","secondary_identifiers":["UMLS:C1135191","ICD9:428.2","SCTID:417996009","EFO:1001207","ICD9:428.20","MedDRA:10074631","MEDGEN:210050","DOID:9651"],"termid":"MONDO:0006993","xrefs":{"Monarch":{"xref_id":"0006993"}}}


id: GO:0075194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of symbiont haustorium mother cell formation. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of haustorium mother cell formation","termid":"GO:0075193"},{"relation_name":"positively_regulates","term_name":"haustorium mother cell formation","termid":"GO:0075192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of haustorium mother cell formation","synonyms":[{"name":"positive regulation of haustorium mother cell formation on or near host","type":"exact"}],"termid":"GO:0075194"}


id: PR:O42650
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase RIO1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10593:SF5","PRO:DNx","OMA:SCHPO00494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase rio1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.10","secondary_identifiers":["UniProtKB:O42650"],"synonyms":[{"name":"Spom972h-RIOK1","type":"exact"}],"termid":"PR:O42650"}


id: MOD:00930
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"tyrosine adduct with substrate analog inhibitor 1,2-dideoxy-2'-methyl-alpha-D-glucopyranoso-[2,1-d]-Delta2'-thiazoline.","definition_xrefs":["PubMed:15795231","Unimod:514"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"propyl-NAG tyrosine adduct","termid":"MOD:00930"}


id: GO:0042099
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete gamma-delta T cell receptor activity (obsolete GO:0042099)","synonyms":[{"name":"gamma-delta T cell receptor activity","type":"exact"}],"termid":"GO:0042099"}


id: GO:1900309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maltoheptaose metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate metabolic process","termid":"GO:0006109"},{"relation_name":"regulates","term_name":"maltoheptaose metabolic process","termid":"GO:2001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of maltoheptaose metabolic process","synonyms":[{"name":"regulation of maltoheptaose metabolism","type":"exact"}],"termid":"GO:1900309"}


id: PBO:0066356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulocalbin 3","termid":"PBO:0066356"}


id: FYPO:0001233
data:
  {"alleles_by_uniquename":{"SJAG_02763:allele-3":{"allele_type":"amino_acid_mutation","description":"S235A; S651","gene_uniquename":"SJAG_02763","name":"ned1S235A/S651","synonyms":[{"name":"refractory to phosphorylation","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-3"},"SJAG_03250:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03250","name":"sst4delta","uniquename":"SJAG_03250:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003751"},{"annotations":[118834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003780"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount, distribution, composition or morphology of a cell part is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular physical quality phenotype","termid":"FYPO:0007723"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02763":null,"SJAG_03250":null},"genotype_count":2,"genotypes_by_uniquename":{"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235A/S651(S235A; S651 aa)","display_uniquename":"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-3","expression":"Not assayed or wild type"}]}]},"sst4delta":{"display_name":"sst4delta","display_uniquename":"sst4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03250:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal subcellular component","references_by_uniquename":{"PMID:26774782":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_02763","SJAG_03250"],"single_locus_genotype_uniquenames":["sst4delta","ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"normal subcellular structure","type":"related"}],"termid":"FYPO:0001233","terms_by_termid":{"FYPO:0003751":null,"FYPO:0003780":null}}


id: PBO:0109129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRIPTO pseudogene 1","termid":"PBO:0109129"}


id: MOD:01634
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-aspartic acid.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-aspartic acid removal","termid":"MOD:01634"}


id: GO:0016062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a rhodopsin-mediated signaling pathway is adjusted to modulate the sensitivity and response of a visual system to light stimuli (that might vary over more than 6 magnitudes in intensity) without response saturation.","definition_xrefs":["PMID:1962207"],"gene_count":0,"genotype_count":0,"name":"obsolete adaptation of rhodopsin mediated signaling (obsolete GO:0016062)","synonyms":[{"name":"adaptation of rhodopsin mediated signalling","type":"exact"}],"termid":"GO:0016062"}


id: PBO:0031224
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_attachment_of_spindle_microtubules_to_kinetochore_involved_in_homologous_chromosome_segregation","termid":"PBO:0031224"}


id: PBO:0039887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP42 pseudogene 4","termid":"PBO:0039887"}


id: PBO:0072114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14 pseudogene 3","termid":"PBO:0072114"}


id: PBO:0038958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADIRF antisense RNA 1","termid":"PBO:0038958"}


id: GO:0097507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"DNA N-glycosylase activity acting on deaminated adenine (hypoxanthine).","definition_xrefs":["GOC:al","PMID:18789404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deaminated base DNA N-glycosylase activity","termid":"GO:0097506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0140097","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"hypoxanthine DNA N-glycosylase activity","synonyms":[{"name":"hypoxanthine-DNA glycosylase activity","type":"related"}],"termid":"GO:0097507"}


id: MONDO:0012583
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tooth agenesis","termid":"MONDO:0005486"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tooth agenesis, selective, 5","secondary_identifiers":["UMLS:C1858210","MEDGEN:346764","MESH:C565757","GARD:18248","OMIM:610926"],"synonyms":[{"name":"STHAG5","type":"exact"},{"name":"he-Zhao deficiency","type":"related"},{"name":"hypodontia/oligodontia 5","type":"related"},{"name":"tooth agenesis, selective, 5","type":"exact"}],"termid":"MONDO:0012583","xrefs":{"Monarch":{"xref_id":"0012583"}}}


id: PBO:0047922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(10)(q11.2)","termid":"PBO:0047922"}


id: PBO:0001846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silencing defective protein Sde2","termid":"PBO:0001846"}


id: PBO:0029165
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation","termid":"PBO:0029165"}


id: FYPO:0006730
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which strand elongation during nuclear DNA replication is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication","termid":"FYPO:0001343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000293","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic DNA replication elongation","synonyms":[{"name":"abnormal DNA replication elongation during vegetative growth","type":"exact"},{"name":"abnormal DNA replication strand elongation","type":"exact"},{"name":"abnormal DNA replication elongation during mitotic cell cycle","type":"exact"},{"name":"abnormal DNA strand elongation involved in nuclear cell cycle DNA replication","type":"exact"}],"termid":"FYPO:0006730"}


id: MONDO:0010664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Snyder-Robinson syndrome (SRS) is an X-linked intellectual disability syndrome, including also hypotonia, an unsteady gait, osteoporosis, kyphoscoliosis and facial asymmetry. Severe generalized psychomotor evolving to moderate to profound global intellectual disability is also observed.","definition_xrefs":["Orphanet:3063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"disorder of polyamine metabolism","termid":"MONDO:0800159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"syndromic X-linked intellectual disability Snyder type","secondary_identifiers":["NORD:1890","UMLS:C0796160","SCTID:702416008","MEDGEN:162918","MESH:C536678","DOID:0060802","OMIM:309583","ICD9:758.89","GARD:5615"],"synonyms":[{"name":"MRXSSR","type":"related"},{"name":"SRS","type":"exact"},{"name":"Snyder-Robinson Syndrome","type":"exact"},{"name":"Snyder-Robinson intellectual disability syndrome","type":"exact"},{"name":"Snyder-Robinson mental retardation syndrome","type":"exact"},{"name":"Snyder-Robinson syndrome","type":"exact"},{"name":"X-linked intellectual disability Snyder-Robinson type","type":"related"},{"name":"X-linked intellectual disability, Snyder type","type":"related"},{"name":"X-linked mental retardation Snyder-Robinson type","type":"related"},{"name":"intellectual developmental disorder, X-linked syndromic, Snyder-Robinson type, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked, Snyder-Robinson type","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, Snyder-Robinson type","type":"related"},{"name":"mental retardation, X-linked, Snyder-Robinson type","type":"exact"},{"name":"mental retardation, X-linked, syndromic, Snyder-Robinson type","type":"related"},{"name":"spermine synthase deficiency","type":"exact"},{"name":"syndromic X-linked intellectual disability Snyder type","type":"exact"}],"termid":"MONDO:0010664","xrefs":{"Monarch":{"xref_id":"0010664"}}}


id: PBO:0078065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 55 (pseudogene)","termid":"PBO:0078065"}


id: GO:0018197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-aspartic acid.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-aspartic acid modification","termid":"GO:0018197"}


id: GO:0008704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-carboxymethyl-2-hydroxymuconate = 5-carboxy-2-oxohept-3-enedioate.","definition_xrefs":["EC:5.3.3.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"5-carboxymethyl-2-hydroxymuconate delta-isomerase activity","secondary_identifiers":["UM-BBD_reactionID:r0366","GO:0018843","MetaCyc:5.3.3.10-RXN","RHEA:18813"],"synonyms":[{"name":"2-hydroxyhepta-2,4-diene-1,7-dioate isomerase","type":"related"},{"name":"5-carboxymethyl-2-hydroxymuconate D-isomerase activity","type":"exact"},{"name":"5-carboxymethyl-2-hydroxymuconate delta2,Delta4-2-oxo,Delta3-isomerase activity","type":"related"},{"name":"5-carboxymethyl-2-hydroxymuconic acid isomerase activity","type":"related"},{"name":"CHM isomerase activity","type":"related"},{"name":"HHDD isomerase activity","type":"exact"},{"name":"hpaG-1","type":"related"},{"name":"hpaG1","type":"related"}],"termid":"GO:0008704"}


id: GO:0009195
data:
  {"annotated_genes":["SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine ribonucleoside diphosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside diphosphate catabolic process","termid":"GO:0009140"},{"relation_name":"is_a","term_name":"ribonucleoside diphosphate catabolic process","termid":"GO:0009191"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate metabolic process","termid":"GO:0009193"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"pyrimidine ribonucleoside diphosphate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine ribonucleoside diphosphate breakdown","type":"exact"},{"name":"pyrimidine ribonucleoside diphosphate catabolism","type":"exact"},{"name":"pyrimidine ribonucleoside diphosphate degradation","type":"exact"}],"termid":"GO:0009195","terms_by_termid":{"GO:0006256":null}}


id: GO:0009547
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribosome contained within a plastid.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organellar ribosome","termid":"GO:0000313"},{"relation_name":"part_of","term_name":"plastid stroma","termid":"GO:0009532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"plastid ribosome","termid":"GO:0009547"}


id: MONDO:0007483
data:
  {"annotated_genes":["SJAG_04380"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85515],"is_not":false,"summary":null,"term":"MONDO:0007483"}]},"cv_name":"mondo","definition":"Acropigmentation of Dohi is a genodermatosis characterized by the presence of hyperpigmented and hypopigmented macules, principally located on the extremities and limbs.","definition_xrefs":["Orphanet:41"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reticulate pigment disorder","termid":"MONDO:0000118"},{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"},{"relation_name":"is_a","term_name":"ADAR-related type 1 interferonopathy","termid":"MONDO:0700261"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dyschromatosis symmetrica hereditaria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:127400","UMLS:C0406775","MESH:C535729","SCTID:239085000","DOID:0060257","NCIT:C118435","GARD:334","MEDGEN:96071"],"synonyms":[{"name":"DSH","type":"related"},{"name":"DSH1","type":"exact"},{"name":"RAD","type":"exact"},{"name":"acropigmentation of Dohi","type":"exact"},{"name":"dyschromatosis symmetrica hereditaria","type":"exact"},{"name":"dyschromatosis symmetrica hereditaria 1","type":"related"},{"name":"familial reticulate acropigmentation of Dohi","type":"related"},{"name":"reticulate acropigmentation of Dohi","type":"exact"},{"name":"symmetric dyschromatosis of the extremities","type":"related"}],"termid":"MONDO:0007483","terms_by_termid":{"MONDO:0007483":null},"xrefs":{"Monarch":{"xref_id":"0007483"}}}


id: GO:0044351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An endocytosis process that results in the uptake of liquid material by cells from their external environment by the 'ruffling' of the cell membrane to form heterogeneously sized intracellular vesicles called macropinosomes, which can be up to 5 micrometers in size.","definition_xrefs":["PMID:14732047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pinocytosis","termid":"GO:0006907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"macropinocytosis","secondary_identifiers":["GO:1902538"],"synonyms":[{"name":"clathrin-independent pinocytosis","type":"broad"},{"name":"single-organism macropinocytosis","type":"related"}],"termid":"GO:0044351"}


id: RO:0003305
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between an entity (e.g. a genotype, genetic variation, chemical, or environmental exposure) and a condition (a phenotype or disease), where the entity influences the severity with which a condition manifests in an individual.","direct_ancestors":[{"relation_name":"is_a","term_name":"contributes_to_condition","termid":"RO:0003304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contributes_to_severity_of_condition","termid":"RO:0003305"}


id: GO:0060785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of cell death by apoptosis that results in the maintenance of the steady-state number of cells within a tissue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"part_of","term_name":"homeostasis of number of cells within a tissue","termid":"GO:0048873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of apoptosis involved in tissue homeostasis","termid":"GO:0060785"}


id: PBO:0074099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 27 member 2","termid":"PBO:0074099"}


id: PBO:0062471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 162 pseudogene","termid":"PBO:0062471"}


id: MONDO:0005424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Enlargement of an area of the body due to obstruction within the lymphatic system and the resulting accumulation of lymph.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphedema","termid":"MONDO:0019297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"elephantiasis","secondary_identifiers":["SCTID:240820001","DOID:4976","UMLS:C0013882","MEDGEN:8582","MESH:D004604","EFO:0004711"],"termid":"MONDO:0005424","xrefs":{"Monarch":{"xref_id":"0005424"}}}


id: PR:O74503
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spp27 gene.","definition_xrefs":["UniProtKB:O74503","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream activation factor subunit spp27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.17","synonyms":[{"name":"Spom972h-spp27","type":"exact"},{"name":"p27 (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"p30 (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"upstream activation factor 27 KDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"upstream activation factor 30 KDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"upstream activation factor subunit uaf30 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74503"}


id: GO:0090546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which excess light energy absorbed by chlorophyll and not used to drive photosynthesis is re-emitted as light.","definition_xrefs":["PMID:10938857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"energy quenching","termid":"GO:1990066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chlorophyll fluorescence","termid":"GO:0090546"}


id: PBO:0109659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing coactivator Pwi1","termid":"PBO:0109659"}


id: MONDO:1011451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic pulmonary fibrosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumonia, non-human animal","termid":"MONDO:0700110"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"idiopathic disease, non-human animal","termid":"MONDO:1011323"},{"relation_name":"is_a","term_name":"premature aging syndrome, non-human animal","termid":"MONDO:1011350"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic pulmonary fibrosis, non-human animal","secondary_identifiers":["OMIA:001417"],"termid":"MONDO:1011451","xrefs":{"Monarch":{"xref_id":"1011451"}}}


id: GO:0008926
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannitol 1-phosphate + NAD+ = D-fructose 6-phosphate + NADH + H+.","definition_xrefs":["EC:1.1.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"mannitol-1-phosphate 5-dehydrogenase activity","secondary_identifiers":["MetaCyc:MANNPDEHYDROG-RXN","RHEA:19661"],"termid":"GO:0008926"}


id: GO:0010042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a manganese ion stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to manganese ion","synonyms":[{"name":"response to manganese","type":"exact"}],"termid":"GO:0010042"}


id: MONDO:0013700
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive disorder caused by mutation(s) in the PNLIP gene, encoding pancreatic triacylglycerol lipase. The condition is characterized by absent or reduced pancreatic lipase.","definition_xrefs":["NCIT:C129030"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pancreas disorder","termid":"MONDO:0002356"},{"relation_name":"excluded_subClassOf","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"pancreas disorder","termid":"MONDO:0002356"},{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"pancreatic triacylglycerol lipase deficiency","secondary_identifiers":["ICD10CM:K90.3","ICD9:277.89","MEDGEN:482157","GARD:17401","UMLS:C3280527","Orphanet:309031","SCTID:78960005","icd11.foundation:349070670","OMIM:614338","NANDO:2200912"],"synonyms":[{"name":"PL deficiency","type":"related"},{"name":"PNLIPD","type":"related"},{"name":"colipase, congenital absence of pancreatic","type":"related"},{"name":"lipase and colipase, congenital absence of pancreatic","type":"related"},{"name":"lipase and colipase, deficiency of","type":"related"},{"name":"lipase, congenital absence of pancreatic","type":"related"},{"name":"pancreatic colipase deficiency","type":"related"},{"name":"pancreatic lipase deficiency","type":"related"},{"name":"pancreatic triglyceride lipase deficiency","type":"exact"}],"termid":"MONDO:0013700","xrefs":{"Monarch":{"xref_id":"0013700"}}}


id: PBO:0083751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential conserved small ribosomal subunit (40s) synthesis factor; component of the 90S preribosome; required for production of 18S rRNA and small ribosomal subunit; contains five consensus RNA-binding domains and binds to the pre-rRNA at two sites within the 18S region","termid":"PBO:0083751"}


id: PBO:0084070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase involved in initiation of Mitotic Exit Network (MEN); GTP-binding protein of the Ras superfamily; accumulates at daughter spindle pole body and activates MEN kinase cascade; controls actomyosin and septin dynamics during cytokinesis","termid":"PBO:0084070"}


id: PBO:0087831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Thiamine-phosphate diphosphorylase and hydroxyethylthiazole kinase; required for thiamine biosynthesis; GFP-fusion protein localizes to the cytoplasm in a punctate pattern","termid":"PBO:0087831"}


id: PR:000085729
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe) that has been methylated on Lys-9 but not phosphorylated on Ser-10. Example: UniProtKB:P09988, 2-136, Lys-10, MOD:00663|Ser-11, PR:000026291.","definition_xrefs":["PomBase:VW","PMID:19362535","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht1/Me:(K9),UnPhos(S10)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"PRO_0000221366, Lys-10, MOD:00663|Ser-11, PR:000026291","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.1, initiator methionine removed K9-methylated and unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht1/InitMet-/K9MeUnPhos:1","type":"exact"},{"name":"UniProtKB:P09988, 2-136, Lys-10, MOD:00663|Ser-11, PR:000026291","type":"related"},{"name":"hht1/Me:(K9),UnPhos(S10)","type":"exact"}],"termid":"PR:000085729"}


id: GO:0008289
data:
  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lipid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":125,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00054":null,"SJAG_00115":null,"SJAG_00117":null,"SJAG_00118":null,"SJAG_00152":null,"SJAG_00173":null,"SJAG_00185":null,"SJAG_00216":null,"SJAG_00223":null,"SJAG_00268":null,"SJAG_00314":null,"SJAG_00355":null,"SJAG_00368":null,"SJAG_00405":null,"SJAG_00467":null,"SJAG_00514":null,"SJAG_00610":null,"SJAG_00638":null,"SJAG_00663":null,"SJAG_00700":null,"SJAG_00821":null,"SJAG_00907":null,"SJAG_00946":null,"SJAG_00970":null,"SJAG_00971":null,"SJAG_01116":null,"SJAG_01135":null,"SJAG_01143":null,"SJAG_01229":null,"SJAG_01305":null,"SJAG_01309":null,"SJAG_01324":null,"SJAG_01329":null,"SJAG_01382":null,"SJAG_01407":null,"SJAG_01437":null,"SJAG_01448":null,"SJAG_01458":null,"SJAG_01516":null,"SJAG_01519":null,"SJAG_01564":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_01748":null,"SJAG_01769":null,"SJAG_01783":null,"SJAG_01787":null,"SJAG_01794":null,"SJAG_01848":null,"SJAG_01863":null,"SJAG_01866":null,"SJAG_01945":null,"SJAG_02004":null,"SJAG_02166":null,"SJAG_02177":null,"SJAG_02248":null,"SJAG_02274":null,"SJAG_02277":null,"SJAG_02278":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_02392":null,"SJAG_02414":null,"SJAG_02426":null,"SJAG_02468":null,"SJAG_02492":null,"SJAG_02572":null,"SJAG_02587":null,"SJAG_02613":null,"SJAG_02626":null,"SJAG_02657":null,"SJAG_02707":null,"SJAG_02728":null,"SJAG_02852":null,"SJAG_02878":null,"SJAG_02902":null,"SJAG_02912":null,"SJAG_02982":null,"SJAG_02989":null,"SJAG_03010":null,"SJAG_03170":null,"SJAG_03246":null,"SJAG_03247":null,"SJAG_03250":null,"SJAG_03405":null,"SJAG_03488":null,"SJAG_03563":null,"SJAG_03593":null,"SJAG_03596":null,"SJAG_03690":null,"SJAG_03704":null,"SJAG_03705":null,"SJAG_03710":null,"SJAG_03718":null,"SJAG_03721":null,"SJAG_03756":null,"SJAG_03847":null,"SJAG_03851":null,"SJAG_03970":null,"SJAG_04001":null,"SJAG_04010":null,"SJAG_04018":null,"SJAG_04024":null,"SJAG_04077":null,"SJAG_04206":null,"SJAG_04219":null,"SJAG_04221":null,"SJAG_04275":null,"SJAG_04370":null,"SJAG_04413":null,"SJAG_04417":null,"SJAG_04470":null,"SJAG_04479":null,"SJAG_04575":null,"SJAG_04600":null,"SJAG_04644":null,"SJAG_04648":null,"SJAG_04960":null,"SJAG_04963":null,"SJAG_05179":null,"SJAG_05245":null,"SJAG_05261":null,"SJAG_16459":null,"SJAG_MIT09":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"lipid 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id: PR:O94327
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC725.10 gene.","definition_xrefs":["UniProtKB:O94327","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocator protein homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.10","synonyms":[{"name":"Spom972h-SPBC725.10","type":"exact"}],"termid":"PR:O94327"}


id: PBO:0073823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC7A2 intronic transcript 1","termid":"PBO:0073823"}


id: PBO:0005376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit 8 (predicted)","termid":"PBO:0005376"}


id: MONDO:0003333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mature monodermal teratoma that arises from the ovary and is characterized by the presence of benign, thyroid-type tissues.","definition_xrefs":["NCIT:C40012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian benign neoplasm","termid":"MONDO:0000646"},{"relation_name":"is_a","term_name":"struma ovarii","termid":"MONDO:0006980"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign struma ovarii","secondary_identifiers":["DOID:5209"],"synonyms":[{"name":"benign struma ovarii","type":"exact"},{"name":"struma ovarii, benign","type":"exact"}],"termid":"MONDO:0003333","xrefs":{"Monarch":{"xref_id":"0003333"}}}


id: PBO:0068703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 84, pseudogene","termid":"PBO:0068703"}


id: MOD:00476
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an galactose group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosylated residue","termid":"MOD:00434"},{"relation_name":"is_a","term_name":"galactosylated","termid":"MOD:00728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"galactosylated residue","synonyms":[{"name":"GalRes","type":"exact"}],"termid":"MOD:00476"}


id: PBO:0004975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 protein family 10","termid":"PBO:0004975"}


id: PBO:0047332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBLIM1 pseudogene 1","termid":"PBO:0047332"}


id: PBO:0049441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 18","termid":"PBO:0049441"}


id: GO:0015666
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of endonucleolytic cleavage of DNA in a site-specific manner, resulting in double-strand breaks.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0140097","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"restriction endodeoxyribonuclease activity","synonyms":[{"name":"restriction endonuclease activity","type":"exact"},{"name":"restriction enzyme activity","type":"exact"}],"termid":"GO:0015666"}


id: PBO:0030652
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_cycle_arrest_in_mitotic_G2_phase_during_starvation","termid":"PBO:0030652"}


id: PBO:0089263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dubious, SPNCRNA.800  syntenic position","termid":"PBO:0089263"}


id: GO:1990453
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex involved in the disassembly and subsequent reassembly of nucleosomes. It associates with the coding region of transcriptionally active genes where it interacts with the RNA polymerase II and affects its processivity during co-transcriptional RNA processing and maturation. It exists as a functionally independent part of the NuA4 complex.","definition_xrefs":["GOC:bhm","PMID:24843044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nucleosome disassembly/reassembly complex","synonyms":[{"name":"eaf5/7/3 complex","type":"narrow"}],"termid":"GO:1990453"}


id: GO:0006943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The conversion of chemical energy into mechanical work (as in the contraction of a muscle).","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete chemi-mechanical coupling (obsolete GO:0006943)","synonyms":[{"name":"chemi-mechanical coupling","type":"exact"},{"name":"mechanochemical coupling","type":"exact"}],"termid":"GO:0006943"}


id: PBO:0000239
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer","termid":"PBO:0000239"}


id: GO:0036513
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that functions in the retrotranslocation step of ERAD (ER-associated protein degradation), and includes at its core Derlin-1 oligomers forming a retrotranslocation channel.","definition_xrefs":["PMID:16186510","GOC:bf","GOC:PARL","PMID:15215856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005783","GO:0005789","GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"Derlin-1 retrotranslocation complex","synonyms":[{"name":"Derlin-1 complex","type":"exact"},{"name":"Derlin-1 protein dislocation complex","type":"exact"},{"name":"Derlin-1 retro-translocation complex","type":"exact"},{"name":"Derlin-1 retrotranslocon","type":"exact"},{"name":"ERAD protein dislocation complex","type":"exact"}],"termid":"GO:0036513"}


id: PBO:0028080
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiple_mitotic_spindles","termid":"PBO:0028080"}


id: MONDO:0012828
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial atrial fibrillation in which the cause of the disease is a mutation in the KCNA5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrial fibrillation","termid":"MONDO:0018054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial fibrillation, familial, 7","secondary_identifiers":["MESH:C567389","UMLS:C2677106","OMIM:612240","GARD:15545","MEDGEN:393658"],"synonyms":[{"name":"ATFB7","type":"related"},{"name":"KCNA5 familial atrial fibrillation","type":"exact"},{"name":"atrial fibrillation, familial, 7","type":"exact"},{"name":"atrial fibrillation, familial, type 7","type":"exact"},{"name":"familial atrial fibrillation caused by mutation in KCNA5","type":"exact"}],"termid":"MONDO:0012828","xrefs":{"Monarch":{"xref_id":"0012828"}}}


id: GO:0032256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a dense core granule to a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of secretory granule localization","termid":"GO:0032254"},{"relation_name":"part_of","term_name":"dense core granule localization","termid":"GO:0032253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of dense core granule localization","synonyms":[{"name":"establishment of dense core granule localisation","type":"exact"},{"name":"establishment of dense core vesicle localization","type":"exact"}],"termid":"GO:0032256"}


id: MONDO:0016958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 7q duplication is a chromosome abnormality that occurs when there is an extra copy of genetic material on the long arm (q) of chromosome 7. The severity of the condition and the signs and symptoms depend on the size and location of the duplication and which genes are involved. Features that often occur in people with chromosome 7q duplication include developmental delay, intellectual disability, behavioral problems and distinctive facial features. Most cases are not inherited, but people can pass the duplication on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0005357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 7","termid":"MONDO:0016928"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the long arm of chromosome 7","secondary_identifiers":["icd11.foundation:462724513","MEDGEN:208637","Orphanet:262887","MESH:C537821","UMLS:C0795821","GARD:5357"],"synonyms":[{"name":"7q duplication","type":"related"},{"name":"7q trisomy","type":"related"},{"name":"Duplication 7q","type":"related"},{"name":"chromosome 7q duplication","type":"related"},{"name":"partial duplication of chromosome 7q","type":"exact"},{"name":"partial duplication of the long arm of chromosome type 7","type":"exact"},{"name":"partial trisomy 7q","type":"related"},{"name":"partial trisomy of chromosome 7q","type":"exact"},{"name":"partial trisomy of the long arm of chromosome 7","type":"exact"},{"name":"trisomy 7q","type":"related"}],"termid":"MONDO:0016958","xrefs":{"Monarch":{"xref_id":"0016958"}}}


id: PBO:0041213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1D nuclear receptor corepressor pseudogene 1","termid":"PBO:0041213"}


id: PBO:0028558
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_mitotic_spindle","termid":"PBO:0028558"}


id: PBO:0064187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XIIA pseudogene 1","termid":"PBO:0064187"}


id: PBO:0027010
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_mononucleate_aseptate_vegetative_cell_with_cell_cycle_arrest_in_mitotic_G2_phase","termid":"PBO:0027010"}


id: PBO:0026743
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_negative_regulation_of_protein_kinase_activity","termid":"PBO:0026743"}


id: PBO:0062754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily M member 1","termid":"PBO:0062754"}


id: PBO:0067312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 398, pseudogene","termid":"PBO:0067312"}


id: PBO:0071026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 28","termid":"PBO:0071026"}


id: PBO:0084543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the PAK family of serine/threonine protein kinases; similar to Ste20p; involved in down-regulation of sterol uptake; proposed to be a downstream effector of Cdc42p during polarized growth; SKM1 has a paralog, CLA4, that arose from the whole genome duplication","termid":"PBO:0084543"}


id: MONDO:0015238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arhinia-choanal atresia-microphthalmia is a malformation disorder characterized by complete or incomplete absence of nose (arrhinia), choanal atresia, microphthalmia, anophthalmia and cleft or high palate.","definition_xrefs":["Orphanet:1135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrhinia-choanal atresia-microphthalmia syndrome","secondary_identifiers":["GARD:8755","NORD:1909"],"synonyms":[{"name":"Bosma Arhinia Microphthalmia Syndrome","type":"exact"},{"name":"Bosma Henkin Christiansen syndrome","type":"related"},{"name":"Bosma arhinia microphthalmia syndrome","type":"related"},{"name":"arhinia choanal atresia microphthalmia","type":"related"},{"name":"congenital absence of nose and anterior nasopharynx","type":"related"}],"termid":"MONDO:0015238","xrefs":{"Monarch":{"xref_id":"0015238"}}}


id: GO:0015968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A specific global change in the metabolism of a bacterial cell (the downregulation of nucleic acid and protein synthesis, and the simultaneous upregulation of protein degradation and amino acid synthesis) as a result of starvation.","definition_xrefs":["PMID:11282471","ISBN:0124325653","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stringent response","secondary_identifiers":["Wikipedia:Stringent_response"],"termid":"GO:0015968"}


id: PBO:0029890
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_stress_granule_assembly","termid":"PBO:0029890"}


id: PBO:0084348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Large subunit of carbamoyl phosphate synthetase; carbamoyl phosphate synthetase catalyzes a step in the synthesis of citrulline, an arginine precursor","termid":"PBO:0084348"}


id: MONDO:0001118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spotted fever that has material basis in Rickettsia australis, which is transmitted by ticks (Ixodes holocyclus). The infection has symptom fever, has symptom headache, has symptom myalgia, has symptom maculopapular rash, and has symptom lymphadenopathy.","definition_xrefs":["DOID:10784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spotted fever","termid":"MONDO:0001195"},{"relation_name":"is_a","term_name":"tick-borne infectious disease","termid":"MONDO:0025294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Queensland tick typhus","secondary_identifiers":["UMLS:C2979888","ICD9:082.3","MEDGEN:755996","SCTID:68981009"],"synonyms":[{"name":"Australian tick typhus","type":"related"},{"name":"North Queensland tick typhus","type":"related"},{"name":"Rickettsia australis spotted fever","type":"exact"}],"termid":"MONDO:0001118","xrefs":{"Monarch":{"xref_id":"0001118"}}}


id: PBO:0044866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 2A","termid":"PBO:0044866"}


id: PBO:0113327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; added to genome annotation based on evolutionary, translation, and proteomics evidence","termid":"PBO:0113327"}


id: GO:0004381
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + glycoprotein-alpha-L-fucosyl-(1,2)-D-galactose = UDP + glycoprotein-alpha-D-galactosyl-(1,3)-(alpha-L-fucosyl-(1,2))-D-galactose.","definition_xrefs":["EC:2.4.1.37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"fucosylgalactoside 3-alpha-galactosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.37-RXN","Reactome:R-HSA-9034053","Reactome:R-HSA-9033961","RHEA:14349"],"synonyms":[{"name":"B transferase activity","type":"related"},{"name":"UDP-galactose:alpha-L-fucosyl-(1,2)-D-galactoside 3-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:alpha-L-fucosyl-(1->2)-D-galactoside 3-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:O-alpha-L-fucosyl(1,2)D-galactose alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:O-alpha-L-fucosyl(1->2)D-galactose alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:alpha-L-fucosyl-(1,2)-D-galactoside 3-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:alpha-L-fucosyl-(1->2)-D-galactoside 3-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:glycoprotein-alpha-L-fucosyl-(1,2)-D-galactose 3-alpha-D-galactosyltransferase activity","type":"related"},{"name":"[blood group substance] alpha-galactosyltransferase activity","type":"narrow"},{"name":"blood-group substance B-dependent galactosyltransferase activity","type":"narrow"},{"name":"blood-group substance beta-dependent galactosyltransferase activity","type":"narrow"},{"name":"fucosylglycoprotein 3-alpha-galactosyltransferase activity","type":"related"},{"name":"glycoprotein-fucosylgalactoside alpha-galactosyltransferase activity","type":"exact"},{"name":"histo-blood group B transferase activity","type":"narrow"},{"name":"histo-blood substance B-dependent galactosyltransferase activity","type":"related"},{"name":"histo-blood substance beta-dependent galactosyltransferase activity","type":"narrow"}],"termid":"GO:0004381"}


id: FYPO:0004904
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the central core of the centromeric regions is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during vegetative growth","termid":"FYPO:0000449"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to centromere central core during vegetative growth","secondary_identifiers":["FYPO:0005224"],"synonyms":[{"name":"decreased protein localisation to centromere central core during vegetative growth","type":"exact"},{"name":"decreased protein localization to centromere central core during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at centromere central core during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at centromere central core during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromosome, centric central core","type":"exact"},{"name":"decreased protein localization to chromosome, centromeric central core during vegetative growth","type":"exact"},{"name":"reduced protein localization to centromere central core during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at centromere central core during vegetative growth","type":"exact"}],"termid":"FYPO:0004904"}


id: PBO:0040767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 3 pseudogene 2","termid":"PBO:0040767"}


id: MONDO:0006081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma arising from the anus. Clinical presentation includes rectal bleeding, tenesmus, pain, and change in bowel habit. The prognosis is usually poor.","definition_xrefs":["NCIT:C4639"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"intestinal neoplasm","termid":"MONDO:0021118"},{"relation_name":"is_a","term_name":"anus cancer","termid":"MONDO:0001879"},{"relation_name":"is_a","term_name":"rectum malignant melanoma","termid":"MONDO:0002167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"anal melanoma","secondary_identifiers":["MEDGEN:91151","SCTID:276821000","ONCOTREE:ARMM","DOID:14145","UMLS:C0349538","EFO:1000080"],"synonyms":[{"name":"anal malignant melanoma","type":"exact"},{"name":"anal melanoma","type":"exact"},{"name":"anus melanoma","type":"exact"},{"name":"anus melanoma (disease)","type":"exact"},{"name":"malignant anus melanoma","type":"exact"},{"name":"malignant melanoma of anus","type":"exact"},{"name":"malignant melanoma of the anus","type":"exact"},{"name":"melanoma (disease) of anus","type":"exact"},{"name":"melanoma of anus","type":"exact"},{"name":"melanoma of the anus","type":"exact"}],"termid":"MONDO:0006081","xrefs":{"Monarch":{"xref_id":"0006081"}}}


id: PBO:0048635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein alpha 4","termid":"PBO:0048635"}


id: PBO:0030580
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuolar_glutamine_level","termid":"PBO:0030580"}


id: GO:0050848
data:
  {"annotated_genes":["SJAG_03799","SJAG_02858","SJAG_04551","SJAG_01181"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115626,100493],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106057"},{"annotations":[101648,110468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050850"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium-mediated signaling, the process in which a cell uses calcium ions to convert an extracellular signal into a response.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"calcium-mediated signaling","termid":"GO:0019722"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01181":null,"SJAG_02858":null,"SJAG_03799":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of calcium-mediated signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of calcium-mediated signalling","type":"exact"}],"termid":"GO:0050848","terms_by_termid":{"GO:0050850":null,"GO:0106057":null}}


id: PBO:0041207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic leucine zipper and W2 domains 1","termid":"PBO:0041207"}


id: GO:2000805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of termination of RNA polymerase II transcription, poly(A)-coupled.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of termination of RNA polymerase II transcription","termid":"GO:0120191"},{"relation_name":"is_a","term_name":"regulation of termination of RNA polymerase II transcription, poly(A)-coupled","termid":"GO:2000804"},{"relation_name":"negatively_regulates","term_name":"termination of RNA polymerase II transcription, poly(A)-coupled","termid":"GO:0030846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0006355","GO:0008150"],"is_obsolete":false,"name":"negative regulation of termination of RNA polymerase II transcription, poly(A)-coupled","synonyms":[{"name":"negative regulation of termination of RNA polymerase II transcription, polyadenylation-coupled","type":"related"},{"name":"negative regulation of transcription termination from Pol II promoter, RNA polymerase(A) coupled","type":"related"},{"name":"negative regulation of transcription termination from Pol II promoter, poly(A) coupled","type":"related"}],"termid":"GO:2000805"}


id: GO:0040005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Attaching of a chitin-containing cuticle to the epithelium underlying it. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molting cycle process","termid":"GO:0022404"},{"relation_name":"part_of","term_name":"molting cycle, chitin-based cuticle","termid":"GO:0007591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chitin-based cuticle attachment to epithelium","synonyms":[{"name":"cuticular attachment to epithelium","type":"broad"}],"termid":"GO:0040005"}


id: PBO:0112610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prospore membrane formation protein Mug56","termid":"PBO:0112610"}


id: PBO:0041518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 15 open reading frame 62","termid":"PBO:0041518"}


id: MONDO:0018357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"secondary neonatal autoimmune disease","termid":"MONDO:0018356"},{"relation_name":"is_a","term_name":"secondary antiphospholipid syndrome","termid":"MONDO:0021008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"neonatal antiphospholipid syndrome","secondary_identifiers":["MEDGEN:1664921","Orphanet:398097","GARD:21644","UMLS:C4751518"],"synonyms":[{"name":"neonatal Hughes syndrome","type":"exact"},{"name":"neonatal antiphospholipid antibody syndrome","type":"exact"}],"termid":"MONDO:0018357","xrefs":{"Monarch":{"xref_id":"0018357"}}}


id: PBO:0054251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1634","termid":"PBO:0054251"}


id: MONDO:0015669
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare disease with dentinogenesis imperfecta (obsolete MONDO:0015669)","secondary_identifiers":["Orphanet:167762"],"termid":"MONDO:0015669","xrefs":{"Monarch":{"xref_id":"0015669"}}}


id: PR:Q9UTB3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- deg1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTB3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase C25B8.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.05","synonyms":[{"name":"Spom972h-deg1","type":"exact"}],"termid":"PR:Q9UTB3"}


id: GO:0032378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of lipids within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid transport","termid":"GO:0032369"},{"relation_name":"is_a","term_name":"regulation of intracellular lipid transport","termid":"GO:0032377"},{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"negatively_regulates","term_name":"intracellular lipid transport","termid":"GO:0032365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of intracellular lipid transport","synonyms":[{"name":"down regulation of intracellular lipid transport","type":"exact"},{"name":"down-regulation of intracellular lipid transport","type":"exact"},{"name":"downregulation of intracellular lipid transport","type":"exact"},{"name":"inhibition of intracellular lipid transport","type":"narrow"}],"termid":"GO:0032378"}


id: SO:0000837
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_region","termid":"SO:0000836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTR_region","synonyms":[{"name":"UTR region","type":"exact"}],"termid":"SO:0000837"}


id: PBO:0042468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle associated 5","termid":"PBO:0042468"}


id: FYPO:0005231
data:
  {"alleles_by_uniquename":{"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119080],"is_not":false,"summary":null,"term":"FYPO:0005231"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after entering stationary phase, when cells the population are subject to glucose starvation.","definition_xrefs":["PomBase:mah","PMID:26624998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"loss of viability in stationary phase","termid":"FYPO:0000245"},{"relation_name":"is_a","term_name":"loss of viability upon glucose starvation","termid":"FYPO:0004162"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":1,"genotypes_by_uniquename":{"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0001985"],"is_obsolete":false,"name":"loss of viability in stationary phase upon glucose starvation","references_by_uniquename":{"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_02527"],"single_locus_genotype_uniquenames":["lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown"],"synonyms":[{"name":"decreased viability in stationary phase upon glucose starvation","type":"exact"},{"name":"growth defect, required for stationary phase upon glucose starvation","type":"related"},{"name":"loss of cell population viability in stationary phase upon glucose starvation","type":"exact"},{"name":"loss of viability in stationary phase during glucose starvation","type":"exact"},{"name":"reduced viability in stationary phase upon glucose starvation","type":"exact"}],"termid":"FYPO:0005231","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0005231":null}}


id: GO:0018617
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-aminobenzenesulfonate + 2 H+ + O2 + 2 e- = NH3 + 4-sulfocatechol.","definition_xrefs":["UM-BBD_reactionID:r0580"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-aminobenzenesulfonate 3,4-dioxygenase (deaminating) activity (obsolete GO:0018617)","synonyms":[{"name":"4-aminobenzenesulphonate 3,4-dioxygenase (deaminating) activity","type":"exact"}],"termid":"GO:0018617"}


id: MONDO:0006598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermatitis caused or precipitated by exposure to ultraviolet sunlight, or by mediating phototoxic or photoallergic material in response to ultraviolet sunlight.","definition_xrefs":["NCIT:C4816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"irritant dermatitis","termid":"MONDO:0006564"},{"relation_name":"is_a","term_name":"photosensitivity disease","termid":"MONDO:0006597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"phototoxic dermatitis","secondary_identifiers":["SCTID:53597009","EFO:1000753","DOID:4407","MEDGEN:58188","MESH:D017484","Wikipedia:Photodermatitis","UMLS:C0162830"],"synonyms":[{"name":"Photodermatitis","type":"exact"},{"name":"Photosensitisation reaction","type":"exact"},{"name":"photosensitive dermatitis","type":"exact"},{"name":"photosensitiveness","type":"exact"},{"name":"photosensitivity reaction","type":"exact"}],"termid":"MONDO:0006598","xrefs":{"Monarch":{"xref_id":"0006598"}}}


id: PBO:0088327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"magnesium transporter NIPA","termid":"PBO:0088327"}


id: GO:0051571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 4 of histone H3.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K4 methylation (obsolete GO:0051571)","synonyms":[{"name":"activation of histone H3-K4 methylation","type":"narrow"},{"name":"stimulation of histone H3-K4 methylation","type":"narrow"},{"name":"up regulation of histone H3-K4 methylation","type":"exact"},{"name":"up-regulation of histone H3-K4 methylation","type":"exact"},{"name":"upregulation of histone H3-K4 methylation","type":"exact"}],"termid":"GO:0051571"}


id: FYPO:0001216
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the assembly of a SAGA complex onto chromatin is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal SAGA complex assembly","synonyms":[{"name":"normal SAGA complex assembly during mitotic cell cycle","type":"related"},{"name":"normal SAGA complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0001216"}


id: PBO:0031136
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_interphase_microtubule_nucleation","termid":"PBO:0031136"}


id: PBO:0067227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 297, pseudogene","termid":"PBO:0067227"}


id: PBO:0077289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 30C, pseudogene","termid":"PBO:0077289"}


id: GO:0035063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of nuclear specks, a class of nuclear body in which splicing factors are localized.","definition_xrefs":["GOC:bf","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear body organization","termid":"GO:0030575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nuclear speck organization","synonyms":[{"name":"nuclear speck organisation","type":"exact"},{"name":"nuclear speck organization and biogenesis","type":"related"},{"name":"nuclear speckle assembly","type":"narrow"},{"name":"nuclear speckle organization","type":"exact"}],"termid":"GO:0035063"}


id: PBO:0046629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 10","termid":"PBO:0046629"}


id: GO:1905800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intraciliary retrograde transport.","definition_xrefs":["GOC:TermGenie","PMID:27930654","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of intraciliary retrograde transport","termid":"GO:1905799"},{"relation_name":"negatively_regulates","term_name":"intraciliary retrograde transport","termid":"GO:0035721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of intraciliary retrograde transport","synonyms":[{"name":"down regulation of intraciliary retrograde transport","type":"exact"},{"name":"down regulation of intraflagellar retrograde transport","type":"exact"},{"name":"down-regulation of intraciliary retrograde transport","type":"exact"},{"name":"down-regulation of intraflagellar retrograde transport","type":"exact"},{"name":"downregulation of intraciliary retrograde transport","type":"exact"},{"name":"downregulation of intraflagellar retrograde transport","type":"exact"},{"name":"inhibition of intraciliary retrograde transport","type":"narrow"},{"name":"inhibition of intraflagellar retrograde transport","type":"narrow"},{"name":"negative regulation of intraflagellar retrograde transport","type":"exact"}],"termid":"GO:1905800"}


id: MOD:01669
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to N(omega),N(omega),N'(omega)-trimethyl-L-arginine.","definition_xrefs":["OMSSA:117","PubMed:11704273","RESID:AA0523","Unimod:37#R","PubMed:602668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trimethylated residue","termid":"MOD:00430"},{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"},{"relation_name":"is_a","term_name":"methylated arginine","termid":"MOD:00658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"trimethyl-L-arginine","synonyms":[{"name":"(2S)-2-amino-5-([(dimethylamino)(methylamino)methylidene]amino)pentanoic acid","type":"exact"},{"name":"(2S)-2-amino-5-([(dimethylamino)(methylimino)methyl]amino)pentanoic acid","type":"exact"},{"name":"2-[(4S)-4-amino-5-oxopentyl]-1,1,3-trimethylguanidine","type":"exact"},{"name":"N(G)-trimethylarginine","type":"exact"},{"name":"N5-[(dimethylamino)(imino)methyl]ornithine","type":"exact"},{"name":"NoNoNo'Me3Arg","type":"exact"},{"name":"Trimethyl","type":"related"},{"name":"omega-N,omega-N,omega-N'-trimethyl-L-arginine","type":"exact"},{"name":"tri-Methylation","type":"related"},{"name":"trimethylationr","type":"exact"}],"termid":"MOD:01669"}


id: MONDO:0020491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A developmental brain abnormality characterized by atypical migration of neurons during cortical development.","definition_xrefs":["NCIT:C116933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"subcortical band heterotopia","secondary_identifiers":["GARD:1904","MEDGEN:336288","Orphanet:99796","UMLS:C1848201","icd11.foundation:525786944","DOID:0111169","NANDO:1201070"],"synonyms":[{"name":"Double cortex","type":"related"},{"name":"HeCo","type":"exact"},{"name":"band heterotopia","type":"exact"},{"name":"double cortex syndrome","type":"exact"},{"name":"familial band heterotopia","type":"related"},{"name":"heterotopic cortex","type":"exact"},{"name":"subcortical laminar heterotopia","type":"exact"}],"termid":"MONDO:0020491","xrefs":{"Monarch":{"xref_id":"0020491"}}}


id: GO:0097577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of binding or confining iron ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:mr","PMID:3099306"],"gene_count":0,"genotype_count":0,"name":"obsolete sequestering of iron ion (obsolete GO:0097577)","synonyms":[{"name":"iron ion retention","type":"exact"},{"name":"iron ion sequestering","type":"exact"},{"name":"iron ion sequestration","type":"exact"},{"name":"iron ion storage","type":"exact"},{"name":"retention of iron ion","type":"exact"},{"name":"sequestration of iron ion","type":"exact"},{"name":"storage of iron ion","type":"exact"}],"termid":"GO:0097577"}


id: PBO:0074457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin phosphodiesterase 2","termid":"PBO:0074457"}


id: GO:2000371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of DNA topoisomerase (ATP-hydrolyzing) activity.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA topoisomerase (ATP-hydrolyzing) activity (obsolete GO:2000371)","synonyms":[{"name":"regulation of DNA topoisomerase (ATP-hydrolysing)","type":"related"},{"name":"regulation of DNA topoisomerase II","type":"related"},{"name":"regulation of DNA topoisomerase IV activity","type":"exact"},{"name":"regulation of DNA topoisomerase type II activity","type":"exact"},{"name":"regulation of deoxyribonucleate topoisomerase","type":"related"},{"name":"regulation of deoxyribonucleic topoisomerase activity","type":"exact"},{"name":"regulation of topoisomerase","type":"related"},{"name":"regulation of topoisomerase II","type":"exact"},{"name":"regulation of type II DNA topoisomerase activity","type":"exact"}],"termid":"GO:2000371"}


id: GO:0001774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a microglial cell resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["PMID:10626665","PMID:9893949","GOC:mgi_curators","PMID:12580336","PMID:10695728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte activation involved in inflammatory response","termid":"GO:0002269"},{"relation_name":"is_a","term_name":"macrophage activation","termid":"GO:0042116"},{"relation_name":"is_a","term_name":"glial cell activation","termid":"GO:0061900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microglial cell activation","termid":"GO:0001774"}


id: GO:0002340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any B cell selection process that occurs in the bone marrow.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell selection","termid":"GO:0002339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central B cell selection","synonyms":[{"name":"central B lymphocyte selection","type":"exact"},{"name":"central B-cell selection","type":"exact"},{"name":"central B-lymphocyte selection","type":"exact"}],"termid":"GO:0002340"}


id: GO:0010394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving homogalacturonan, a pectin characterized by a backbone of alpha-(1->4)-linked D-galacturonic acid residues that can be methyl-esterified at C-6 and carry acetyl groups on O-2 and O-3.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galacturonan metabolic process","termid":"GO:0010393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"homogalacturonan metabolic process","synonyms":[{"name":"homogalacturonan metabolism","type":"exact"}],"termid":"GO:0010394"}


id: PBO:0079898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase, complex III subunit X","termid":"PBO:0079898"}


id: GO:0005309
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: creatine(out) + Na+(out) = creatine(in) + Na+(in).","definition_xrefs":["TC:2.A.22.3.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"creatine transmembrane transporter activity","termid":"GO:0005308"},{"relation_name":"is_a","term_name":"organic acid:sodium symporter activity","termid":"GO:0005343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"creatine:sodium symporter activity","secondary_identifiers":["Reactome:R-HSA-200396"],"synonyms":[{"name":"sodium/chloride-dependent creatine transporter","type":"broad"}],"termid":"GO:0005309"}


id: PATO:0001079
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001079 absolute work (obsolete PATO:0001079)","termid":"PATO:0001079"}


id: PBO:0052210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNQ5 antisense RNA 1","termid":"PBO:0052210"}


id: PATO:0001938
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spheroid quality inhering in a bearer by virtue of the bearer's being oval and a little angular in the middle.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parallelogram","termid":"PATO:0002317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid","termid":"PATO:0001938"}


id: MONDO:0001022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"amblyopia","termid":"MONDO:0001020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disuse amblyopia","secondary_identifiers":["MEDGEN:508918","UMLS:C0152189","DOID:10378","SCTID:193638002","ICD9:368.02"],"synonyms":[{"name":"deprivation amblyopia","type":"exact"}],"termid":"MONDO:0001022","xrefs":{"Monarch":{"xref_id":"0001022"}}}


id: PBO:0048041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSIP2 antisense RNA 2","termid":"PBO:0048041"}


id: MONDO:0800426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dengue fever, susceptibility to","termid":"MONDO:0800426","xrefs":{"Monarch":{"xref_id":"0800426"}}}


