# terms

id: MONDO:0044335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm that arises from the soft tissue.","definition_xrefs":["NCIT:C4242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign connective and soft tissue neoplasm","termid":"MONDO:0000654"},{"relation_name":"is_a","term_name":"soft tissue neoplasm","termid":"MONDO:0006424"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign soft tissue neoplasm","secondary_identifiers":["SCTID:92069005","UMLS:C0334450","ICDO:8800/0","MEDGEN:83151"],"synonyms":[{"name":"benign neoplasm of soft tissue","type":"exact"},{"name":"benign neoplasm of the soft tissue","type":"exact"},{"name":"benign soft tissue neoplasm","type":"exact"},{"name":"benign soft tissue tumor","type":"exact"},{"name":"benign soft tissue tumour","type":"exact"},{"name":"benign tumor of soft tissue","type":"exact"},{"name":"benign tumor of the soft tissue","type":"exact"},{"name":"benign tumour of soft tissue","type":"exact"},{"name":"benign tumour of the soft tissue","type":"exact"},{"name":"soft tissue neoplasm, benign","type":"exact"}],"termid":"MONDO:0044335","xrefs":{"Monarch":{"xref_id":"0044335"}}}


id: MONDO:0018429
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 14","termid":"MONDO:0016912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"14q24.1q24.3 microdeletion syndrome","secondary_identifiers":["Orphanet:401935","UMLS:C4750911","MEDGEN:1668571","GARD:21706"],"synonyms":[{"name":"Del(14)(q24.1q24.3)","type":"exact"},{"name":"monosomy 14q24.1q24.3","type":"exact"}],"termid":"MONDO:0018429","xrefs":{"Monarch":{"xref_id":"0018429"}}}


id: GO:0006526
data:
  {"annotated_genes":["SJAG_00635","SJAG_00392","SJAG_00695","SJAG_01461","SJAG_04577","SJAG_01592","SJAG_01019","SJAG_00636","SJAG_00412"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97654,97664,102125,102948,106008,109958,110568,111398,117884],"is_not":false,"summary":null,"term":"GO:0006526"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arginine metabolic process","termid":"GO:0006525"},{"relation_name":"is_a","term_name":"glutamine family amino acid biosynthetic process","termid":"GO:0009084"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00412":null,"SJAG_00635":null,"SJAG_00636":null,"SJAG_00695":null,"SJAG_01019":null,"SJAG_01461":null,"SJAG_01592":null,"SJAG_04577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-arginine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"arginine anabolism","type":"exact"},{"name":"arginine biosynthesis","type":"exact"},{"name":"arginine formation","type":"exact"},{"name":"arginine synthesis","type":"exact"}],"termid":"GO:0006526","terms_by_termid":{"GO:0006526":null}}


id: GO:0061120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of directed movement of a motile cell or organism up a concentration gradient of 3',5'-cAMP by the action of DIF-1. DIF-1 is a chlorinated alkylphenone.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of positive chemotaxis to cAMP by chlorinated alkylphenone","termid":"GO:0061119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of positive chemotaxis to cAMP by DIF-1","termid":"GO:0061120"}


id: MONDO:0003604
data:
  {"annotated_genes":["SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"}]},"cv_name":"mondo","definition":"A hormone producing pituitary gland tumor, associated with a hormonal syndrome.","definition_xrefs":["NCIT:C7047"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pituitary cancer","termid":"MONDO:0002109"},{"relation_name":"is_a","term_name":"pituitary tumor","termid":"MONDO:0017611"},{"relation_name":"is_a","term_name":"functioning endocrine neoplasm","termid":"MONDO:0021120"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03429":null},"genotype_count":0,"is_obsolete":false,"name":"functioning pituitary gland neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:237.0","DOID:5716","UMLS:C0851693","SCTID:448148000","MEDGEN:163414"],"synonyms":[{"name":"functioning endocrine neoplasm of pituitary gland","type":"exact"},{"name":"functioning pituitary gland neoplasm","type":"exact"},{"name":"functioning pituitary neoplasm","type":"exact"},{"name":"functioning pituitary tumor","type":"related"},{"name":"functioning pituitary tumour","type":"related"},{"name":"growth hormone producing pituitary tumour","type":"related"},{"name":"hormone producing pituitary cancer","type":"related"},{"name":"hormone producing pituitary neoplasm","type":"exact"},{"name":"pituitary gland functioning endocrine neoplasm","type":"exact"},{"name":"pituitary neoplasms, hormone producing","type":"exact"},{"name":"pituitary tumors, hormone producing","type":"exact"},{"name":"secretory pituitary tumor","type":"related"},{"name":"secretory pituitary tumour","type":"related"},{"name":"somatotropinoma","type":"related"}],"termid":"MONDO:0003604","terms_by_termid":{"MONDO:0009050":null},"xrefs":{"Monarch":{"xref_id":"0003604"}}}


id: GO:0042531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a STAT (Signal Transducer and Activator of Transcription) protein.","definition_xrefs":["PMID:11426647","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tyrosine phosphorylation of STAT protein","termid":"GO:0042509"},{"relation_name":"is_a","term_name":"positive regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050731"},{"relation_name":"positively_regulates","term_name":"tyrosine phosphorylation of STAT protein","termid":"GO:0007260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tyrosine phosphorylation of STAT protein","secondary_identifiers":["GO:0042523","GO:0042515","GO:0042517","GO:0042511","GO:0042520","GO:0042526","GO:0042529"],"synonyms":[{"name":"activation of tyrosine phosphorylation of STAT protein","type":"narrow"},{"name":"activation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"activation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"activation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"activation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"activation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"activation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"activation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"stimulation of tyrosine phosphorylation of STAT protein","type":"narrow"},{"name":"stimulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"stimulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"stimulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"stimulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"stimulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"stimulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"stimulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"up regulation of tyrosine phosphorylation of STAT protein","type":"exact"},{"name":"up regulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"up regulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"up regulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"up regulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"up regulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"up regulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"up regulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"up-regulation of tyrosine phosphorylation of STAT protein","type":"exact"},{"name":"up-regulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"up-regulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"up-regulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"up-regulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"up-regulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"up-regulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"up-regulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"upregulation of tyrosine phosphorylation of STAT protein","type":"exact"},{"name":"upregulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"upregulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"upregulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"upregulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"upregulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"upregulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"upregulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"}],"termid":"GO:0042531"}


id: GO:1901890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell junction assembly.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of cell junction assembly","termid":"GO:1901888"},{"relation_name":"positively_regulates","term_name":"cell junction assembly","termid":"GO:0034329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell junction assembly","synonyms":[{"name":"activation of cell junction assembly","type":"narrow"},{"name":"up regulation of cell junction assembly","type":"exact"},{"name":"up-regulation of cell junction assembly","type":"exact"},{"name":"upregulation of cell junction assembly","type":"exact"}],"termid":"GO:1901890"}


id: MONDO:1011800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contractural arachnodactyly, non-human animal","secondary_identifiers":["OMIA:001511"],"termid":"MONDO:1011800","xrefs":{"Monarch":{"xref_id":"1011800"}}}


id: GO:0060054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of epithelial cell proliferation, contributing to the restoration of integrity to a damaged tissue following an injury.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"part_of","term_name":"wound healing","termid":"GO:0042060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epithelial cell proliferation involved in wound healing","termid":"GO:0060054"}


id: PBO:0091749
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.1950050_1950051insG","termid":"PBO:0091749"}


id: FYPO:0002730
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the total amount of DNA in a cell is greater than normal when the cell is in a culture in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA content increased","termid":"FYPO:0002729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"DNA content increased during stationary phase","synonyms":[{"name":"increased DNA content during stationary phase","type":"exact"},{"name":"increased DNA level during stationary phase","type":"exact"}],"termid":"FYPO:0002730"}


id: MONDO:0002187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects the vulva. Representative examples include infection, Bartholin gland adenoma, and vulvar carcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vulvar disease","secondary_identifiers":["UMLS:C0042994","DOID:2059","MESH:D014845","SCTID:5089007","NCIT:C27631","MEDGEN:53055"],"synonyms":[{"name":"disorder of vulva","type":"exact"},{"name":"vulval disorder","type":"related"},{"name":"vulvar disease","type":"exact"},{"name":"vulvar disorder","type":"exact"}],"termid":"MONDO:0002187","xrefs":{"Monarch":{"xref_id":"0002187"}}}


id: PBO:0113138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), isozyme 1; involved in glycolysis and gluconeogenesis; tetramer that catalyzes the reaction of glyceraldehyde-3-phosphate to 1,3 bis-phosphoglycerate; detected in the cytoplasm and cell wall; protein abundance increases in response to DNA replication stress; GAPDH-derived antimicrobial peptides secreted by S. cerevisiae are active against a wide variety of wine-related yeasts and bacteria","termid":"PBO:0113138"}


id: MONDO:0013056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare mitochondrial substrate carrier disorder characterized by severe muscular hypotonia, seizures (with or without episodic apnea) beginning in the first year of life, and arrested psychomotor development (affecting mainly motor skills). Severe spasticity with hyperreflexia has also been reported. Global cerebral hypomyelination is a characteristic imaging feature of this disease.","definition_xrefs":["Orphanet:353217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial substrate carrier disorder","termid":"MONDO:0016801"},{"relation_name":"is_a","term_name":"neonatal-onset developmental and epileptic encephalopathy","termid":"MONDO:0100455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005066","MONDO:0005027","MONDO:0004069"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 39","secondary_identifiers":["MEDGEN:414492","OMIM:612949","SCTID:726702005","UMLS:C2751855","DOID:0080349","MESH:C567847","GARD:17532"],"synonyms":[{"name":"AGC1 deficiency","type":"exact"},{"name":"DEE39","type":"exact"},{"name":"EIEE39","type":"exact"},{"name":"SLC25A12 early infantile epileptic encephalopathy","type":"exact"},{"name":"aspartate-glutamate carrier 1 deficiency","type":"related"},{"name":"developmental and epileptic encephalopathy 39","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in SLC25A12","type":"exact"},{"name":"epileptic encephalopathy with global cerebral demyelination","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 39","type":"exact"},{"name":"hypomyelination, global cerebral","type":"related"},{"name":"mitochondrial aspartate-glutamate carrier 1 deficiency","type":"exact"}],"termid":"MONDO:0013056","xrefs":{"Monarch":{"xref_id":"0013056"}}}


id: MONDO:0700072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rhabdoviridae infectious disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhabdoviridae infectious disease, non-human animal","termid":"MONDO:0700072","xrefs":{"Monarch":{"xref_id":"0700072"}}}


id: PBO:0025459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial superoxide dismutase Sod2","termid":"PBO:0025459"}


id: GO:0015761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which mannose is transported across a lipid bilayer, from one side of a membrane to the other. Mannose is the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transport","termid":"GO:0008645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"mannose transmembrane transport","synonyms":[{"name":"mannose transport","type":"related"}],"termid":"GO:0015761"}


id: MONDO:0020434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septal defect","termid":"MONDO:0006664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial septal defect, ostium secundum type","secondary_identifiers":["MedDRA:10031302","NANDO:2200266","MEDGEN:91034","icd11.foundation:1875768490","Orphanet:99103","GARD:5865","UMLS:C0344724","MedDRA:10031303"],"synonyms":[{"name":"ASD ostium secundum type","type":"related"},{"name":"ASD, ostium secundum type","type":"exact"},{"name":"osASD","type":"related"},{"name":"ostium secundum ASD","type":"related"},{"name":"ostium secundum atrial septal defect","type":"related"}],"termid":"MONDO:0020434","xrefs":{"Monarch":{"xref_id":"0020434"}}}


id: MONDO:0011112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Wilms tumor in which the cause of the disease is a mutation in the POU6F2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary Wilms tumor","termid":"MONDO:0003321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"Wilms tumor 5","secondary_identifiers":["OMIM:601583","GARD:15336","MEDGEN:316905","UMLS:C1832099","MESH:C536707"],"synonyms":[{"name":"WT5","type":"related"},{"name":"Wilms tumor 5","type":"exact"},{"name":"Wilms tumor and radial bilateral aplasia","type":"related"},{"name":"Wilms tumor susceptibility-5, autosomal dominant, somatic mutation","type":"exact"},{"name":"Wilms tumor type 5","type":"exact"},{"name":"Wilms tumor, susceptibility to","type":"related"},{"name":"Wilms tumour and radial bilateral aplasia","type":"related"},{"name":"Wilms tumour susceptibility-5, autosomal dominant, somatic mutation","type":"exact"},{"name":"Wilms tumour type 5","type":"exact"},{"name":"bilateral radial aplasia with Wilms tumor","type":"related"},{"name":"bilateral radial aplasia with Wilms tumour","type":"related"}],"termid":"MONDO:0011112","xrefs":{"Monarch":{"xref_id":"0011112"}}}


id: PBO:0048132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fuzzy planar cell polarity protein","termid":"PBO:0048132"}


id: MONDO:0957252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia, primary, 50","secondary_identifiers":["MEDGEN:1841109","OMIM:620356","UMLS:C5830473"],"termid":"MONDO:0957252","xrefs":{"Monarch":{"xref_id":"0957252"}}}


id: PBO:0083786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in ribosome biogenesis; putative ATP-dependent RNA helicase of the DEAD-box protein family; human homolog DDX51 complements yeast dbp6 mutant","termid":"PBO:0083786"}


id: GO:0003115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels as a result of secretion of epinephrine into the bloodstream or released by nerve endings.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vasoconstriction","termid":"GO:0019229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vasoconstriction by epinephrine","termid":"GO:0003115"}


id: PBO:0003923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate reductase (predicted)","termid":"PBO:0003923"}


id: PBO:0041121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTBD3 antisense RNA 1","termid":"PBO:0041121"}


id: PBO:0001206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain","termid":"PBO:0001206"}


id: PBO:0074181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 3","termid":"PBO:0074181"}


id: PBO:0060996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHL repeat containing E3 ubiquitin protein ligase 1","termid":"PBO:0060996"}


id: FYPO:0007909
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the measured vacuolar pH is higher than normal.","definition_xrefs":["PMID:34805795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased vacuolar pH","secondary_identifiers":["PomBase:val"],"termid":"FYPO:0007909"}


id: MONDO:1011001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Syringomyelia that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syringomyelia, non-human animal","termid":"MONDO:1010236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syringomyelia, cattle","secondary_identifiers":["OMIA:000965-9913"],"termid":"MONDO:1011001","xrefs":{"Monarch":{"xref_id":"1011001"}}}


id: PR:O60132
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tea4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tip elongation aberrant protein Tea4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1706.01","synonyms":[{"name":"Spom972h-tea4","type":"exact"},{"name":"cell polarity protein tea4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"win1-interacting SH3 domain protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60132"}


id: GO:0090527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that is carried out at the cellular level which results in dynamic structural changes to the arrangement of actin filaments.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete actin filament reorganization (obsolete GO:0090527)","termid":"GO:0090527"}


id: PBO:0039982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARL5A pseudogene 5","termid":"PBO:0039982"}


id: GO:1902118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to calcidiol.","definition_xrefs":["PMID:11799400","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D3 vitamins binding","termid":"GO:1902271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"calcidiol binding","synonyms":[{"name":"25(OH)D3 binding","type":"exact"},{"name":"25-hydroxycholecalciferol binding","type":"exact"},{"name":"25-hydroxyvitamin D3 binding","type":"exact"},{"name":"25OHD3 binding","type":"exact"},{"name":"calcifediol binding","type":"exact"}],"termid":"GO:1902118"}


id: PR:O74940
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutamine-dependent NAD(+) synthetase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23090:SF1","OMA:SCHPO04261","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine-dependent NAD(+) synthetase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC553.02","secondary_identifiers":["UniProtKB:O74940"],"synonyms":[{"name":"NAD(+) synthase [glutamine-hydrolyzing] (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NADSYN1","type":"exact"}],"termid":"PR:O74940"}


id: MONDO:0012796
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the PROM1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"PROM1-related recessive retinopathy","termid":"MONDO:1040052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0005328","MONDO:0006025"],"is_obsolete":false,"name":"retinitis pigmentosa 41","secondary_identifiers":["UMLS:C2677516","ICD10CM:H35.5","DOID:0110376","GARD:10379","MESH:C567422","MEDGEN:383126","OMIM:612095"],"synonyms":[{"name":"PROM1 retinitis pigmentosa","type":"exact"},{"name":"RP 41","type":"related"},{"name":"RP41","type":"exact"},{"name":"retinal Degeneration, autosomal recessive, prominin-related","type":"related"},{"name":"retinitis pigmentosa 41","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in PROM1","type":"exact"},{"name":"retinitis pigmentosa type 41","type":"exact"}],"termid":"MONDO:0012796","xrefs":{"Monarch":{"xref_id":"0012796"}}}


id: PBO:0052018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JMJD7-PLA2G4B readthrough","termid":"PBO:0052018"}


id: GO:0045824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the innate immune response.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to biotic stimulus","termid":"GO:0002832"},{"relation_name":"is_a","term_name":"negative regulation of defense response","termid":"GO:0031348"},{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of innate immune response","synonyms":[{"name":"down regulation of innate immune response","type":"exact"},{"name":"down-regulation of innate immune response","type":"exact"},{"name":"downregulation of innate immune response","type":"exact"},{"name":"inhibition of innate immune response","type":"narrow"}],"termid":"GO:0045824"}


id: PBO:0003734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L51 (predicted)","termid":"PBO:0003734"}


id: PBO:0004028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex subunit Cog5 (predicted)","termid":"PBO:0004028"}


id: GO:1990352
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric protein complex composed of the E3 ubiquitin-protein ligase BRE1. Plays a role in regulating association of RNA polymerase II with active genes.","definition_xrefs":["GOC:bhm","PMID:19531475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BRE1 E3 ubiquitin ligase complex","synonyms":[{"name":"BRE1 E3 ubiquitin-protein ligase complex","type":"exact"},{"name":"BRE1 oligomer","type":"exact"}],"termid":"GO:1990352"}


id: PBO:0045127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dmx like 1","termid":"PBO:0045127"}


id: SO:0000961
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, RNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"RNA","termid":"SO:0000356"},{"relation_name":"is_a","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_chromosome","synonyms":[{"name":"RNA chromosome","type":"exact"}],"termid":"SO:0000961"}


id: GO:0071865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of cell death by apoptotic process in the bone marrow.","definition_xrefs":["PMID:17063141","GOC:mtg_apoptosis","GOC:mah","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"regulates","term_name":"apoptotic process in bone marrow cell","termid":"GO:0071839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of apoptotic process in bone marrow cell","synonyms":[{"name":"regulation of apoptosis in bone marrow","type":"narrow"},{"name":"regulation of apoptotic process in bone marrow","type":"exact"}],"termid":"GO:0071865"}


id: MONDO:0013911
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypogonadotropic hypogonadism in which the cause of the disease is a mutation in the NSMF gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Kallmann syndrome","termid":"MONDO:0018800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 9 with or without anosmia","secondary_identifiers":["MEDGEN:766756","OMIM:614838","ICD10CM:E23.0","UMLS:C3553842","DOID:0090085","GARD:15850"],"synonyms":[{"name":"HH9","type":"related"},{"name":"NSMF hypogonadotropic hypogonadism","type":"exact"},{"name":"hypogonadotropic hypogonadism 9 with or without anosmia","type":"exact"},{"name":"hypogonadotropic hypogonadism caused by mutation in NSMF","type":"exact"}],"termid":"MONDO:0013911","xrefs":{"Monarch":{"xref_id":"0013911"}}}


id: PBO:0001418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain protein Chp1","termid":"PBO:0001418"}


id: FYPO:0000009
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which adhesion of a cell to a substrate or another cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal cell adhesion","termid":"FYPO:0001872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell adhesion during vegetative growth","synonyms":[{"name":"abnormal cell adhesion during mitotic cell cycle","type":"related"},{"name":"adhesion defects during vegetative growth","type":"exact"}],"termid":"FYPO:0000009"}


id: GO:0019430
data:
  {"annotated_genes":["SJAG_00668","SJAG_04399","SJAG_01734","SJAG_03653","SJAG_04788","SJAG_03303","SJAG_04403","SJAG_05181","SJAG_04632"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57887,64688,68142,88458,88880,92616,98774,99654,109583,109627],"is_not":false,"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process, acting at the cellular level, involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"superoxide metabolic process","termid":"GO:0006801"},{"relation_name":"is_a","term_name":"cellular oxidant detoxification","termid":"GO:0098869"},{"relation_name":"part_of","term_name":"cellular response to superoxide","termid":"GO:0071451"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00668":null,"SJAG_01734":null,"SJAG_03303":null,"SJAG_03653":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"removal of superoxide radicals","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["MetaCyc:DETOX1-PWY"],"synonyms":[{"name":"cellular detoxification of superoxide radicals","type":"exact"},{"name":"removal of O2-","type":"exact"},{"name":"removal of oxygen free radicals","type":"exact"}],"termid":"GO:0019430","terms_by_termid":{"GO:0019430":null}}


id: MOD:00811
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"a protein modification that effectively forms a O3-mannosylthreonine","definition_xrefs":["PubMed:391559","RESID:AA0403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosylated residue","termid":"MOD:00595"},{"relation_name":"is_a","term_name":"monohexosylated (Hex1)","termid":"MOD:00761"},{"relation_name":"is_a","term_name":"O-hexosylated threonine","termid":"MOD:01348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-mannosyl-L-threonine","synonyms":[{"name":"(2S,3R)-2-amino-3-(alpha-D-mannopyranosyloxy)butanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (Hex)","type":"exact"},{"name":"CARBOHYD O-linked (Man) threonine","type":"exact"},{"name":"O-glycosylthreonine","type":"exact"},{"name":"O-mannosyl-L-threonine","type":"exact"},{"name":"O3-mannosylthreonine","type":"exact"},{"name":"OManThr","type":"exact"}],"termid":"MOD:00811"}


id: MONDO:0014062
data:
  {"annotated_genes":["SJAG_04183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84618],"is_not":false,"summary":null,"term":"MONDO:0014062"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive external ophthalmoplegia with mitochondrial DNA deletions","termid":"MONDO:0000090"},{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome","termid":"MONDO:0018158"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069","MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"mitochondrial DNA deletion syndrome with progressive myopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3554599","OMIM:615156","GARD:17518","DOID:0111519","MEDGEN:767513","Orphanet:352470"],"synonyms":[{"name":"PEOA6","type":"related"},{"name":"mitochondrial DNA deletion syndrome with limb-girdle weakness","type":"exact"},{"name":"mtDNA deletion syndrome with limb-girdle weakness","type":"exact"},{"name":"mtDNA deletion syndrome with progressive myopathy","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal dominant 6","type":"related"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal dominant type 6","type":"exact"},{"name":"progressive external ophthalmoplegia, autosomal dominant 6","type":"related"}],"termid":"MONDO:0014062","terms_by_termid":{"MONDO:0014062":null},"xrefs":{"Monarch":{"xref_id":"0014062"}}}


id: PBO:0064744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 80","termid":"PBO:0064744"}


id: MONDO:0060765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polypoid lesion composed of fibrous tissue and epithelium. Representative examples include skin tag, anal fibroepithelial polyp, and gingival fibroepithelial polyp.","definition_xrefs":["NCIT:C3337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyp","termid":"MONDO:0005079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroepithelial polyp","secondary_identifiers":["MEDGEN:1849971","UMLS:C5848070"],"synonyms":[{"name":"fibroepithelial polyp","type":"exact"},{"name":"fibropapilloma, benign","type":"exact"}],"termid":"MONDO:0060765","xrefs":{"Monarch":{"xref_id":"0060765"}}}


id: PBO:0086654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to vacuole; not an essential gene; YNL058C has a paralog, PRM5, that arose from the whole genome duplication","termid":"PBO:0086654"}


id: BFO:0000060
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obsolete_preceded_by","termid":"BFO:0000060"}


id: FYPO:0005114
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endosome(s) is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to endosome","synonyms":[{"name":"normal protein localisation to endosome","type":"exact"},{"name":"normal protein localization to endosome during mitotic cell cycle","type":"related"},{"name":"normal protein localization to endosome during vegetative growth","type":"exact"},{"name":"normal protein targeting to endosome","type":"related"}],"termid":"FYPO:0005114"}


id: FYPO:0000358
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells do not form mating projections.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"shmoo absent","synonyms":[{"name":"absent mating projection morphology","type":"exact"},{"name":"mating projection absent","type":"exact"},{"name":"mating projection morphology: absent","type":"related"}],"termid":"FYPO:0000358"}


id: GO:0033893
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of poly(A) to fragments terminated by 3'-hydroxy and 5'-phosphate groups.","definition_xrefs":["EC:3.1.26.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"ribonuclease IV activity","secondary_identifiers":["MetaCyc:3.1.26.6-RXN"],"synonyms":[{"name":"endoribonuclease IV activity","type":"related"}],"termid":"GO:0033893"}


id: GO:0033979
data:
  {"annotated_genes":["SJAG_04754"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000495"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving box H/ACA type small nucleolar RNA.","definition_xrefs":["GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sno(s)RNA metabolic process","termid":"GO:0016074"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016074"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016074"],"is_obsolete":false,"name":"box H/ACA sno(s)RNA metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"box H/ACA sRNA metabolic process","type":"narrow"},{"name":"box H/ACA snoRNA metabolic process","type":"narrow"}],"termid":"GO:0033979","terms_by_termid":{"GO:0000495":null}}


id: PBO:0001490
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.32","termid":"PBO:0001490"}


id: GO:0045882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sulfur utilization.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sulfur utilization","termid":"GO:0006792"},{"relation_name":"is_a","term_name":"negative regulation of response to nutrient levels","termid":"GO:0032108"},{"relation_name":"negatively_regulates","term_name":"sulfur utilization","termid":"GO:0006791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sulfur utilization","synonyms":[{"name":"down regulation of sulfur utilization","type":"exact"},{"name":"down-regulation of sulfur utilization","type":"exact"},{"name":"downregulation of sulfur utilization","type":"exact"},{"name":"inhibition of sulfur utilization","type":"narrow"},{"name":"negative regulation of sulphur utilization","type":"exact"}],"termid":"GO:0045882"}


id: PBO:0065143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolactin releasing hormone receptor","termid":"PBO:0065143"}


id: GO:0038093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the Fc portion of an immunoglobulin to an Fc receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. The Fc portion of an immunoglobulin is its C-terminal constant region.","definition_xrefs":["GOC:phg","Wikipedia:Fc_receptor"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-regulating cell surface receptor signaling pathway","termid":"GO:0002768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Fc receptor signaling pathway","synonyms":[{"name":"Fc receptor signalling pathway","type":"exact"}],"termid":"GO:0038093"}


id: PBO:0059905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 28","termid":"PBO:0059905"}


id: PBO:0051411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 1-47","termid":"PBO:0051411"}


id: PBO:0043470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 7 pseudogene 2","termid":"PBO:0043470"}


id: PBO:0027672
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_small_spore_with_abnormal_shape","termid":"PBO:0027672"}


id: MONDO:0016006
data:
  {"annotated_genes":["SJAG_04540","SJAG_04114"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019569"},{"annotations":[85561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019570"}]},"cv_name":"mondo","definition":"A multisystem condition characterized by short stature, a characteristic facial appearance, premature aging, photosensitivity, progressive neurological dysfunction, and intellectual deficit.","definition_xrefs":["Orphanet:191"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"excluded_subClassOf","term_name":"hereditary photodermatosis","termid":"MONDO:0015951"},{"relation_name":"excluded_subClassOf","term_name":"premature aging syndrome","termid":"MONDO:0019303"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic genetic hearing loss (obsolete MONDO:0019589)","termid":"MONDO:0019589"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic retinitis pigmentosa (obsolete MONDO:0020240)","termid":"MONDO:0020240"},{"relation_name":"excluded_subClassOf","term_name":"DNA repair disease","termid":"MONDO:0021190"},{"relation_name":"excluded_subClassOf","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"progeroid syndrome","termid":"MONDO:0015333"},{"relation_name":"is_a","term_name":"DNA repair disease","termid":"MONDO:0021190"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04114":null,"SJAG_04540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019303","MONDO:0021190","MONDO:0006025"],"is_obsolete":false,"name":"Cockayne syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:21086008","GARD:6122","MEDGEN:40363","icd11.foundation:1206275070","NCIT:C9460","DOID:2962","MedDRA:10009835","NORD:982","UMLS:C0009207","NANDO:1200677","NANDO:2200832","ICD9:759.89","MESH:D003057"],"synonyms":[{"name":"Cockayne's syndrome","type":"related"},{"name":"Neill-Dingwall syndrome","type":"exact"},{"name":"dwarfism-retinal atrophy-deafness syndrome","type":"related"},{"name":"progeria-like syndrome","type":"related"},{"name":"progeroid nanism","type":"related"}],"termid":"MONDO:0016006","terms_by_termid":{"MONDO:0019569":null,"MONDO:0019570":null},"xrefs":{"Monarch":{"xref_id":"0016006"}}}


id: PBO:0068182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 489","termid":"PBO:0068182"}


id: _global:has_divisor_quality
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"has_ratio_quality","termid":"_global:has_ratio_quality"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_divisor_quality","termid":"_global:has_divisor_quality"}


id: MONDO:0002207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon intraepithelial malignant neoplasm of eccrine or apocrine origin, arising from the vulva. It usually affects post-menopausal women. In approximately 10-20% of the cases there is an associated anorectal, or urothelial carcinoma or a skin appendage adenocarcinoma identified. It presents as a red, eczematous lesion. Microscopically, it is characterized by the presence of the typical Paget cells which are large, round cells with abundant cytoplasm and prominent nuclei.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extramammary Paget disease","termid":"MONDO:0008177"},{"relation_name":"is_a","term_name":"vulvar adenocarcinoma","termid":"MONDO:0024336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vulval Paget disease","secondary_identifiers":["NCIT:C4027","MEDGEN:266154","ICD9:233.39","UMLS:C1275217","DOID:2097","SCTID:254898001"],"synonyms":[{"name":"Paget disease of the vulva","type":"exact"},{"name":"Paget's disease of the vulva","type":"exact"},{"name":"Paget's disease of vulva","type":"exact"},{"name":"mammalian vulva Paget disease","type":"exact"},{"name":"vulva Paget's disease","type":"exact"},{"name":"vulval Paget disease","type":"exact"},{"name":"vulval Paget's disease","type":"exact"},{"name":"vulvar Paget's disease","type":"exact"}],"termid":"MONDO:0002207","xrefs":{"Monarch":{"xref_id":"0002207"}}}


id: PBO:0038747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actinin alpha 4 pseudogene 2","termid":"PBO:0038747"}


id: GO:0003912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); template-independent extension of the 3'-end of a DNA strand by one nucleotide at a time.","definition_xrefs":["EC:2.7.7.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA polymerase activity","termid":"GO:0034061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0016779","GO:0003674","GO:0003824","GO:0016740","GO:0140097"],"is_obsolete":false,"name":"DNA nucleotidylexotransferase activity","secondary_identifiers":["MetaCyc:DNA-NUCLEOTIDYLEXOTRANSFERASE-RXN"],"synonyms":[{"name":"TdT","type":"related"},{"name":"addase activity","type":"related"},{"name":"deoxynucleotidyl terminal transferase activity","type":"related"},{"name":"deoxyribonucleic acid nucleotidyltransferase activity","type":"related"},{"name":"deoxyribonucleic nucleotidyltransferase activity","type":"related"},{"name":"nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"related"},{"name":"terminal addition enzyme activity","type":"related"},{"name":"terminal deoxynucleotide transferase activity","type":"related"},{"name":"terminal deoxynucleotidyltransferase activity","type":"related"},{"name":"terminal deoxyribonucleotidyltransferase activity","type":"related"},{"name":"terminal transferase activity","type":"related"}],"termid":"GO:0003912"}


id: PBO:0005119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PX/PXA domain protein","termid":"PBO:0005119"}


id: PBO:0076039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 36","termid":"PBO:0076039"}


id: MONDO:0012667
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the VCL gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1W","secondary_identifiers":["UMLS:C1969639","GARD:15515","MEDGEN:370063","MESH:C566954","DOID:0110446","OMIM:611407"],"synonyms":[{"name":"CMD1W","type":"exact"},{"name":"VCL familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1W","type":"related"},{"name":"cardiomyopathy, dilated, type 1W","type":"exact"},{"name":"dilated cardiomyopathy type 1W","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in VCL","type":"exact"}],"termid":"MONDO:0012667","xrefs":{"Monarch":{"xref_id":"0012667"}}}


id: MONDO:0054765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial primary localized cutaneous amyloidosis","termid":"MONDO:0007101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021179","MONDO:0005093"],"is_obsolete":false,"name":"amyloidosis, primary localized cutaneous, 3","secondary_identifiers":["OMIM:617920","MEDGEN:1640641","UMLS:C4554421"],"synonyms":[{"name":"PLCA3","type":"related"},{"name":"amyloidosis cutis dyschromica","type":"related"},{"name":"amyloidosis, PRIMARY LOCALIZED cutaneous, 3","type":"related"}],"termid":"MONDO:0054765","xrefs":{"Monarch":{"xref_id":"0054765"}}}


id: GO:2000265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of blood coagulation, extrinsic pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of blood coagulation","termid":"GO:0030194"},{"relation_name":"is_a","term_name":"positive regulation of protein activation cascade","termid":"GO:2000259"},{"relation_name":"is_a","term_name":"regulation of blood coagulation, extrinsic pathway","termid":"GO:2000263"},{"relation_name":"positively_regulates","term_name":"blood coagulation, extrinsic pathway","termid":"GO:0007598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of blood coagulation, extrinsic pathway","termid":"GO:2000265"}


id: MONDO:1011731
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder, non-human animal","termid":"MONDO:0700106"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple autoimmune diseases syndrome, non-human animal","secondary_identifiers":["OMIA:001808"],"termid":"MONDO:1011731","xrefs":{"Monarch":{"xref_id":"1011731"}}}


id: GO:0046549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of a cone cell, one of the sensory cells in the eye that reacts to the presence of light. Cone cells contain the photopigment iodopsin or cyanopsin and are responsible for photopic (daylight) vision.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye photoreceptor cell development","termid":"GO:0042462"},{"relation_name":"part_of","term_name":"retinal cone cell differentiation","termid":"GO:0042670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal cone cell development","termid":"GO:0046549"}


id: PR:Q9UST9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC336.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UST9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small RNA 2'-O-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.05c","synonyms":[{"name":"HEN1 methyltransferase homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC336.05c","type":"exact"}],"termid":"PR:Q9UST9"}


id: PBO:0079676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 W pseudogene 1","termid":"PBO:0079676"}


id: PBO:0110364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosomal polycystin 1 interacting protein","termid":"PBO:0110364"}


id: PBO:0051185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-76 (pseudogene)","termid":"PBO:0051185"}


id: PBO:0053439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 384","termid":"PBO:0053439"}


id: PBO:0062266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily G member 1 pseudogene","termid":"PBO:0062266"}


id: PBO:0061979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AS member 2 pseudogene","termid":"PBO:0061979"}


id: PBO:0051125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR16-3 (pseudogene)","termid":"PBO:0051125"}


id: GO:0160095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of insect pharynx over time, from its formation to the mature structure.","definition_xrefs":["PMID:10952900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pharynx development","termid":"GO:0060465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"insect pharynx development","termid":"GO:0160095"}


id: GO:0106097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ceramide stimulus.","definition_xrefs":["PMID:18006463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to ceramide","termid":"GO:0106097"}


id: PBO:0043558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type V alpha 1 chain","termid":"PBO:0043558"}


id: PBO:0031001
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_mercaptoethanol","termid":"PBO:0031001"}


id: PBO:0114108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex, WD repeat subunit Swd22","termid":"PBO:0114108"}


id: PBO:0039721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APOBEC3B antisense RNA 1","termid":"PBO:0039721"}


id: PBO:0072142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 19","termid":"PBO:0072142"}


id: GO:1905845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to gamma radiation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23505386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of cellular response to gamma radiation","termid":"GO:1905843"},{"relation_name":"is_a","term_name":"positive regulation of response to gamma radiation","termid":"GO:2001230"},{"relation_name":"positively_regulates","term_name":"cellular response to gamma radiation","termid":"GO:0071480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to gamma radiation","synonyms":[{"name":"activation of cellular response to gamma radiation","type":"narrow"},{"name":"activation of cellular response to gamma ray","type":"related"},{"name":"activation of cellular response to gamma-ray photon","type":"related"},{"name":"positive regulation of cellular response to gamma ray","type":"related"},{"name":"positive regulation of cellular response to gamma-ray photon","type":"related"},{"name":"up regulation of cellular response to gamma radiation","type":"exact"},{"name":"up regulation of cellular response to gamma ray","type":"related"},{"name":"up regulation of cellular response to gamma-ray photon","type":"related"},{"name":"up-regulation of cellular response to gamma radiation","type":"exact"},{"name":"up-regulation of cellular response to gamma ray","type":"related"},{"name":"up-regulation of cellular response to gamma-ray photon","type":"related"},{"name":"upregulation of cellular response to gamma radiation","type":"exact"},{"name":"upregulation of cellular response to gamma ray","type":"related"},{"name":"upregulation of cellular response to gamma-ray photon","type":"related"}],"termid":"GO:1905845"}


id: PBO:0074478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-strand-selective monofunctional uracil-DNA glycosylase 1 pseudogene 1","termid":"PBO:0074478"}


id: PBO:0073480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serum/glucocorticoid regulated kinase 1","termid":"PBO:0073480"}


id: GO:0009154
data:
  {"annotated_genes":["SJAG_02135","SJAG_04870","SJAG_01310","SJAG_02796","SJAG_02945","SJAG_04334","SJAG_00461","SJAG_00633","SJAG_05314","SJAG_02785","SJAG_04192","SJAG_02369","SJAG_02107","SJAG_06622","SJAG_02481","SJAG_04495","SJAG_00605","SJAG_03373","SJAG_00839","SJAG_03828","SJAG_06621","SJAG_03660","SJAG_02009","SJAG_00027","SJAG_03903","SJAG_04048","SJAG_00685","SJAG_03852"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901911"},{"annotations":[115876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006198"},{"annotations":[97487,108414,97767,103968,108419,108415,102885,105316,108881,108417,103141,108880,108879,105317,104950,108416,94498,108418,108882,108883,104949,94010,108884,108413,108885,104948,115848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[103970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[88083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[97685,111068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[72581,75550],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[88690],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a purine ribonucleotide, a compound consisting of ribonucleoside (a purine base linked to a ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide catabolic process","termid":"GO:0006195"},{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"ribonucleotide catabolic process","termid":"GO:0009261"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02481":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04870":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"purine ribonucleotide catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"purine ribonucleotide breakdown","type":"exact"},{"name":"purine ribonucleotide catabolism","type":"exact"},{"name":"purine ribonucleotide degradation","type":"exact"}],"termid":"GO:0009154","terms_by_termid":{"GO:0006096":null,"GO:0006110":null,"GO:0006198":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null,"GO:1901911":null}}


id: PBO:0053078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lebercilin LCA5","termid":"PBO:0053078"}


id: FYPO:0005438
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA/DNA annealing activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA binding","termid":"FYPO:0000656"},{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000653"],"is_obsolete":false,"name":"abnormal DNA/DNA annealing activity","termid":"FYPO:0005438"}


id: FYPO:0005643
data:
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id: PBO:0069670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 947, pseudogene","termid":"PBO:0069670"}


id: GO:0015791
data:
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id: GO:0009894
data:
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id: MONDO:0044219
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. The Duffy blood group system, which consists of 4 alleles, 5 phenotypes, and 5 antigens, is important in clinical medicine because of transfusion incompatibilities and hemolytic disease of the newborn. Duffy antigens are located on ACKR1 (OMIM:613665), or DARC, an acidic glycoprotein found on erythrocytes and other cells throughout the body. The 2 principal antigens, Fy(a) and Fy(b), are produced by the FYA and FYB codominant alleles (see {613665.0001}). Four phenotypes are defined by the corresponding antibodies, anti-Fy(a) and anti-Fy(b): Fy(a+b-), Fy(a-b+), Fy(a+b+), and Fy(a-b-). Fy(a-b-), or Duffy null, is the major phenotype in African and American blacks and is characterized by the presence of Fy(b) on nonerythroid cells, but an absence of Fy(b) on erythrocytes. The Fy(a-b-) phenotype is associated with complete resistance to infection by the malarial parasite Plasmodium vivax (see OMIM:611162). Individuals with the Fy(a-b-) phenotype have the FYB-erythroid silent (FYB-ES) allele with a mutation in the DARC promoter ({613665.0002}). A fifth phenotype, Fy(bwk), or Fy(x), is characterized by weak Fy(b) expression on erythrocytes due to a reduced amount of protein. Individuals with the Fy(bwk) phenotype have the FYB-weak (FYB-WK) allele, also called the FYX allele, with a missense mutation in DARC ({613665.0003}). Other Duffy antigens include Fy3, Fy4, Fy5, and Fy6 (reviews by {21:Pogo and Chaudhuri (2000)}, {10:Langhi and Bordin (2006)}, and {14:Meny (2010)}).","definition_xrefs":["OMIM:110700"],"gene_count":0,"genotype_count":0,"name":"obsolete blood group, duffy system (obsolete MONDO:0044219)","synonyms":[{"name":"Duffy blood Group system","type":"related"},{"name":"FY","type":"related"},{"name":"Plasmodium vivax, resistance to","type":"related"},{"name":"blood group, DUFFY system","type":"related"},{"name":"blood group, Duffy system","type":"exact"}],"termid":"MONDO:0044219","xrefs":{"Monarch":{"xref_id":"0044219"}}}


id: PBO:0059243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L14","termid":"PBO:0059243"}


id: PBO:0031387
data:
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id: PBO:0013451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous to S. cerevisiae YOR074C qualifier=SPAC15E1.04,C-term","termid":"PBO:0013451"}


id: PBO:0083924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fructose 1,6-bisphosphate aldolase; required for glycolysis and gluconeogenesis; catalyzes conversion of fructose 1,6 bisphosphate to glyceraldehyde-3-P and dihydroxyacetone-P; locates to mitochondrial outer surface upon oxidative stress; N-terminally propionylated in vivo","termid":"PBO:0083924"}


id: GO:0006520
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id: FYPO:0004451
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to calcium ions is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein level during cellular response to calcium ion","synonyms":[{"name":"decreased protein accumulation during cellular response to calcium ion","type":"related"},{"name":"decreased protein level during cellular response to calcium","type":"exact"},{"name":"decreased protein level during cellular response to calcium ion during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to calcium ion during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to calcium ion","type":"exact"}],"termid":"FYPO:0004451"}


id: PBO:0040053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 2/3 complex subunit 3 pseudogene 1","termid":"PBO:0040053"}


id: PBO:0052647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 15","termid":"PBO:0052647"}


id: PBO:0084072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase that associates with nuclear 60S pre-ribosomes; required for export of 60S ribosomal subunits from the nucleus","termid":"PBO:0084072"}


id: GO:0015949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which a nucleobase, nucleoside or nucleotide small molecule is synthesized from another nucleobase, nucleoside or nucleotide small molecule.","definition_xrefs":["ISBN:0306444747","ISBN:0471394831","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing small molecule metabolic process","termid":"GO:0055086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"nucleobase-containing small molecule interconversion","secondary_identifiers":["Reactome:R-HSA-499943"],"termid":"GO:0015949"}


id: PBO:0061426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NQO2 antisense RNA 1","termid":"PBO:0061426"}


id: PBO:0110424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TVP23B pseudogene 3","termid":"PBO:0110424"}


id: PBO:0079455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor suppressor candidate 8","termid":"PBO:0079455"}


id: GO:0071946
data:
  {"annotated_genes":["SJAG_04855"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101777],"is_not":false,"summary":null,"term":"GO:0071946"}]},"cv_name":"biological_process","definition":"A DNA replication termination process that is initiated by protein binding to a binding site on the same chromosome, but remote from the termination site, via DNA looping or chromosome kissing.","definition_xrefs":["PMID:20850009","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site-specific DNA replication termination","termid":"GO:0071170"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"cis-acting DNA replication termination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cis acting DNA replication termination","type":"exact"}],"termid":"GO:0071946","terms_by_termid":{"GO:0071946":null}}


id: PBO:0065238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 13 pseudogene 6","termid":"PBO:0065238"}


id: MONDO:0024325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A glomangiomyoma that involves the zone of skin.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin glomus tumor","termid":"MONDO:0002295"},{"relation_name":"is_a","term_name":"glomangiomyoma","termid":"MONDO:0024323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cutaneous glomangiomyoma","secondary_identifiers":["SCTID:403971002","ICD9:227.6","UMLS:C1275227","MEDGEN:698513"],"synonyms":[{"name":"glomangiomyoma of skin","type":"exact"},{"name":"zone of skin glomangiomyoma","type":"exact"}],"termid":"MONDO:0024325","xrefs":{"Monarch":{"xref_id":"0024325"}}}


id: PBO:0061393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin/nucleoplasmin 2","termid":"PBO:0061393"}


id: MONDO:0024454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease that involves the sacral nerve plexus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lumbosacral plexus lesion","termid":"MONDO:0001829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"sacral nerve plexus disorder","secondary_identifiers":["MESH:C537224","UMLS:C2931445","MEDGEN:419804"],"synonyms":[{"name":"disease of sacral nerve plexus","type":"exact"},{"name":"disease or disorder of sacral nerve plexus","type":"exact"},{"name":"disorder of sacral nerve plexus","type":"exact"},{"name":"sacral nerve plexus disease or disorder","type":"exact"},{"name":"sacral nerve plexus disorder","type":"exact"},{"name":"sacral plexopathy","type":"exact"}],"termid":"MONDO:0024454","xrefs":{"Monarch":{"xref_id":"0024454"}}}


id: PBO:0054014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1344","termid":"PBO:0054014"}


id: PBO:0077544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 255A","termid":"PBO:0077544"}


id: PBO:0053995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1317","termid":"PBO:0053995"}


id: PBO:0116199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein repair carboxyl methyl esterase, Pme1","termid":"PBO:0116199"}


id: PBO:0079187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 16, pseudogene","termid":"PBO:0079187"}


id: PBO:0056175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAF1 homolog, negative regulator of RNA polymerase III","termid":"PBO:0056175"}


id: PBO:0042885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP298-TCP10L readthrough","termid":"PBO:0042885"}


id: GO:1905441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chondroitin 4'-sulfate stimulus.","definition_xrefs":["GO_REF:0000071","PMID:22365850","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to chondroitin 4'-sulfate","termid":"GO:1905441"}


id: GO:0061968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organization process that preserves the asymmetry in an organism's body plan or part of an organism with respect to the left and right halves.","definition_xrefs":["PMID:18629866","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of left/right asymmetry","termid":"GO:0061968"}


id: PBO:0091185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F0 subunit 9","termid":"PBO:0091185"}


id: FYPO:0000484
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which reciprocal meiotic recombination does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000293","FYPO:0000631"],"is_obsolete":false,"name":"abolished meiotic recombination","synonyms":[{"name":"absent meiotic recombination","type":"exact"},{"name":"meiotic recombination abolished","type":"exact"},{"name":"meiotic recombination: absent","type":"related"}],"termid":"FYPO:0000484"}


id: GO:1901096
data:
  {"annotated_genes":["SJAG_02433"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901098"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of autophagosome maturation.","definition_xrefs":["PMID:21383079","GOC:autophagy","GOC:TermGenie","PMID:10436019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macroautophagy","termid":"GO:0016241"},{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"is_a","term_name":"regulation of protein-containing complex disassembly","termid":"GO:0043244"},{"relation_name":"regulates","term_name":"autophagosome maturation","termid":"GO:0097352"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02433":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"regulation of autophagosome maturation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1902452"],"synonyms":[{"name":"regulation of amphisome-lysosome fusion","type":"narrow"},{"name":"regulation of autolysosome formation","type":"narrow"},{"name":"regulation of autophagic vacuole fusion","type":"exact"},{"name":"regulation of autophagosome fusion","type":"exact"},{"name":"regulation of fusion of autophagosome with lysosome","type":"narrow"}],"termid":"GO:1901096","terms_by_termid":{"GO:1901098":null}}


id: MONDO:0026419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare non-syndromic cerebral malformation characterized by congenital partial or complete absence of the corpus callosum. Patients are often asymptomatic but may also present with intellectual disability, visual impairment, delayed speech development, seizures, feeding difficulties, impaired hand-eye coordination, and behavioral abnormalities. Patients may have a normal intelligence quotient while exhibiting specific cognitive deficits, such as reduced interhemispheric transfer of sensorimotor information, reduced cognitive processing speed, and deficits in complex reasoning and novel problem-solving. [Orphanet:200]","definition_xrefs":["Orphanet:200"],"gene_count":0,"genotype_count":0,"name":"obsolete isolated corpus callosum agenesis (obsolete MONDO:0026419)","secondary_identifiers":["ICD10CM:Q04.0","icd11.foundation:2012425106"],"termid":"MONDO:0026419","xrefs":{"Monarch":{"xref_id":"0026419"}}}


id: GO:1901851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 7,8-didemethyl-8-hydroxy-5-deazariboflavin.","definition_xrefs":["PMID:14593448","GOC:yaf","UniPathway:UPA00072","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin metabolic process","termid":"GO:1901850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin catabolic process","synonyms":[{"name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin breakdown","type":"exact"},{"name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin catabolism","type":"exact"},{"name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin degradation","type":"exact"},{"name":"coenzyme F0 breakdown","type":"exact"},{"name":"coenzyme F0 catabolic process","type":"exact"},{"name":"coenzyme F0 catabolism","type":"exact"},{"name":"coenzyme F0 degradation","type":"exact"}],"termid":"GO:1901851"}


id: PBO:0073252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEPTIN4 antisense RNA 1","termid":"PBO:0073252"}


id: PBO:0004000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial thioredoxin Trx2","termid":"PBO:0004000"}


id: PBO:0080831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YAP1 pseudogene 2","termid":"PBO:0080831"}


id: GO:0043000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of Cystic Fibrosis Transmembrane conductance Regulator (CFTR) protein from the Golgi to the plasma membrane.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete Golgi to plasma membrane CFTR protein transport (obsolete GO:0043000)","synonyms":[{"name":"Golgi to plasma membrane cystic fibrosis transmembrane conductance regulator protein transport","type":"exact"}],"termid":"GO:0043000"}


id: PBO:0004858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTT109 family histone lysine acetyltransferase","termid":"PBO:0004858"}


id: GO:0047045
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + testosterone = NADPH + H+ + androst-4-ene-3,17-dione.","definition_xrefs":["MetaCyc:1.1.1.64-RXN","EC:1.1.1.64"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testosterone dehydrogenase [NAD(P)+] activity","termid":"GO:0030283"},{"relation_name":"is_a","term_name":"17-beta-hydroxysteroid dehydrogenase (NADP+) activity","termid":"GO:0072582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"testosterone 17-beta-dehydrogenase (NADP+) activity","secondary_identifiers":["KEGG_REACTION:R01838","Wikipedia:Testosterone_17beta-dehydrogenase_(NADP+)","RHEA:14981"],"synonyms":[{"name":"17-ketoreductase activity","type":"broad"},{"name":"17beta-hydroxysteroid:NADP+ 17-oxidoreductase activity","type":"related"},{"name":"NADP-dependent testosterone-17beta-oxidoreductase activity","type":"related"},{"name":"testosterone 17beta-dehydrogenase (NADP+)","type":"related"}],"termid":"GO:0047045"}


id: MOD:01234
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label - alkaline phosphatase to dephosphorylate","definition_xrefs":["PubMed:11467524","Unimod:258#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(18)O monosubstituted residue","termid":"MOD:00581"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(18)O monosubstituted L-serine","synonyms":[{"name":"Label:18O(1)","type":"related"},{"name":"O18 Labeling","type":"related"}],"termid":"MOD:01234"}


id: PBO:0082409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BET family transcriptional regulator; associates with TFIID, and is involved in transcription initiation at TATA-containing promoters; essential for meiosis and expression of meiosis-specific genes;  binds acetylated histone H4 at double-strand break (DSB) sites, and promotes end resection, loading of RPA and Rad51p and ds break repair by homologous recombination; contains two bromodomains that correspond to the C-terminal region of mammalian TAF1; partially redundant with paralog Bdf2p","termid":"PBO:0082409"}


id: GO:1990203
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing two transmembrane subunits; a MdtB dimer and one unit of MdtC. Capable of exporting substrates across the cell membrane. Involved in conferring antibiotic resistance of Gram-negative bacteria by transporting drugs across the membrane.","definition_xrefs":["PMID:20038594","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"MdtBC Complex","synonyms":[{"name":"multidrug efflux pump MdtBC","type":"exact"}],"termid":"GO:1990203"}


id: GO:0071000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a magnetic stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to magnetism","synonyms":[{"name":"response to magnetic stimulus","type":"exact"}],"termid":"GO:0071000"}


id: PBO:0065074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRICKLE2 antisense RNA 3","termid":"PBO:0065074"}


id: PBO:0072284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 2","termid":"PBO:0072284"}


id: GO:0016677
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a heme group acts as a hydrogen or electron donor and reduces a nitrogenous group.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a heme group of donors","termid":"GO:0016675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on a heme group of donors, nitrogenous group as acceptor","secondary_identifiers":["EC:1.9.6.-"],"synonyms":[{"name":"oxidoreductase activity, acting on haem group of donors, nitrogenous group as acceptor","type":"exact"}],"termid":"GO:0016677"}


id: PBO:0031498
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_alkalinity","termid":"PBO:0031498"}


id: GO:0009050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycopeptides, a compound in which carbohydrate is covalently attached to an oligopeptide composed of residues of L and/or D-amino acids. The term usually denotes a product of proteolytic degradation of a glycoprotein but includes glycated peptide.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycopeptide catabolic process","synonyms":[{"name":"glycopeptide breakdown","type":"exact"},{"name":"glycopeptide catabolism","type":"exact"},{"name":"glycopeptide degradation","type":"exact"}],"termid":"GO:0009050"}


id: PR:O13735
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bud6 gene.","definition_xrefs":["UniProtKB:O13735","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-interacting protein 3 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.16","synonyms":[{"name":"Spom972h-bud6","type":"exact"}],"termid":"PR:O13735"}


id: PR:000044777
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proliferating cell nuclear antigen monoubiquitinated form in Schizosaccharomyces pombe. Example: UniProtKB:Q03392, Lys-164, PR:000044771.","definition_xrefs":["PomBase:MAH","PRO:DAN","PMID:16641370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pcn1/Ubiq(K164)","termid":"PR:000044776"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pcn1/MonoUbiq(K164)","pombase_gene_id":"SPBC16D10.09","synonyms":[{"name":"PCNA monoubiquitinated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"PomBase_original_PRO_term_name: proliferating cell nuclear antigen monoubiquitinated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-PCNA/MonoUbiq+","type":"exact"},{"name":"monoubiquitinated PCNA (Schizosaccharomyces pombe)","type":"exact"},{"name":"pcn1/MonoUbiq(K164)","type":"exact"}],"termid":"PR:000044777"}


id: PR:Q7Z9I2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized oxidoreductase YciK that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04765","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C663.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.09c","secondary_identifiers":["UniProtKB:Q7Z9I2"],"synonyms":[{"name":"Spom972h-yciK","type":"exact"}],"termid":"PR:Q7Z9I2"}


id: PATO:0001073
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001073 relative impulse (obsolete PATO:0001073)","termid":"PATO:0001073"}


id: GO:0070979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein ubiquitination process in which ubiquitin monomers are attached to a protein, and then ubiquitin polymers are formed by linkages between lysine residues at position 11 of the ubiquitin monomers. K11-linked polyubiquitination targets the substrate protein for degradation. The anaphase-promoting complex promotes the degradation of mitotic regulators by assembling K11-linked polyubiquitin chains.","definition_xrefs":["GOC:pr","GOC:jsg","PMID:20655260","PMID:21113135","GOC:sp","PMID:18485873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein polyubiquitination","termid":"GO:0000209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein K11-linked ubiquitination","termid":"GO:0070979"}


id: PBO:0089262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(U)-specific exoribonuclease, producing 3' uridine cyclic phosphate ends Mpn1","termid":"PBO:0089262"}


id: MONDO:0006281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of lung adenocarcinoma characterized by the presence of signet ring cells.","definition_xrefs":["NCIT:C45514"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung adenocarcinoma","termid":"MONDO:0005061"},{"relation_name":"is_a","term_name":"signet ring cell carcinoma","termid":"MONDO:0005092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung signet ring cell carcinoma","secondary_identifiers":["DOID:0080305","SCTID:707407001","ICD9:162.9","UMLS:C1708782","EFO:1000338","MEDGEN:310950"],"synonyms":[{"name":"lung signet ring cell carcinoma","type":"exact"},{"name":"signet ring lung adenocarcinoma","type":"related"}],"termid":"MONDO:0006281","xrefs":{"Monarch":{"xref_id":"0006281"}}}


id: MONDO:0011223
data:
  {"annotated_genes":["SJAG_03923","SJAG_02242"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85999,86000],"is_not":false,"summary":null,"term":"MONDO:0011223"}]},"cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis in which the cause of the disease is a mutation in the SETX gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02242":null,"SJAG_03923":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:10502","Orphanet:357043","UMLS:C1865409","DOID:0060196","MEDGEN:355983","MESH:C566550","OMIM:602433"],"synonyms":[{"name":"ALS 4","type":"exact"},{"name":"ALS4","type":"exact"},{"name":"SETX amyotrophic lateral sclerosis","type":"exact"},{"name":"amyotrophic lateral sclerosis 4","type":"exact"},{"name":"amyotrophic lateral sclerosis 4, juvenile","type":"exact"},{"name":"amyotrophic lateral sclerosis caused by mutation in SETX","type":"exact"},{"name":"dHMN with upper motor neuron signs","type":"exact"},{"name":"distal hereditary motor neuropathy with pyramidal features","type":"exact"},{"name":"distal hereditary motor neuropathy with upper motor neuron signs","type":"exact"},{"name":"neuronopathy, distal hereditary motor, with pyramidal features","type":"related"}],"termid":"MONDO:0011223","terms_by_termid":{"MONDO:0011223":null},"xrefs":{"Monarch":{"xref_id":"0011223"}}}


id: PBO:0077348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 88","termid":"PBO:0077348"}


id: MONDO:0030787
data:
  {"annotated_genes":["SJAG_03051"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86437],"is_not":false,"summary":null,"term":"MONDO:0030787"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03051":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 71","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1801153","DOID:0070570","OMIM:619831","UMLS:C5676963"],"synonyms":[{"name":"SPGF71","type":"exact"},{"name":"spermatogenic failure 71","type":"exact"}],"termid":"MONDO:0030787","terms_by_termid":{"MONDO:0030787":null},"xrefs":{"Monarch":{"xref_id":"0030787"}}}


id: PBO:0013056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Prp3","termid":"PBO:0013056"}


id: PBO:0079597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 E2","termid":"PBO:0079597"}


id: GO:0019037
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Specific locations and structures in the virus infected cell involved in assembling new virions.","definition_xrefs":["ISBN:0781718325"],"gene_count":0,"genotype_count":0,"name":"obsolete viral assembly intermediate (obsolete GO:0019037)","termid":"GO:0019037"}


id: PBO:0048337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 48","termid":"PBO:0048337"}


id: PBO:0082221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha aminoadipate reductase; catalyzes the reduction of alpha-aminoadipate to alpha-aminoadipate 6-semialdehyde, which is the fifth step in biosynthesis of lysine; activation requires posttranslational phosphopantetheinylation by Lys5p","termid":"PBO:0082221"}


id: GO:0021761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the limbic system over time from its initial formation until its mature state. The limbic system is a collection of structures in the brain involved in emotion, motivation and emotional aspects of memory.","definition_xrefs":["GOC:cls","ISBN:0878937420","GO_REF:0000021","GOC:dph","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"},{"relation_name":"part_of","term_name":"forebrain development","termid":"GO:0030900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limbic system development","termid":"GO:0021761"}


id: FYPO:0000691
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA-1,N6-ethenoadenine N-glycosylase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal DNA-1,N6-ethenoadenine N-glycosylase activity","termid":"FYPO:0000691"}


id: FYPO:0007729
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle is decreased during anaphase.","definition_xrefs":["PMID:16920624","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle","termid":"FYPO:0002825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle during anaphase","synonyms":[{"name":"decreased protein localisation to mitotic spindle during anaphase","type":"exact"},{"name":"decreased protein localization to elongating mitotic spindle","type":"related"},{"name":"decreased protein localization to mitotic spindle during anaphase during vegetative growth","type":"exact"},{"name":"decreased protein localization to spindle during anaphase of mitotic cell cycle","type":"related"},{"name":"decreased protein localization to spindle during mitotic anaphase","type":"exact"},{"name":"reduced protein localization to mitotic spindle during anaphase","type":"exact"}],"termid":"FYPO:0007729"}


id: MONDO:0054791
data:
  {"annotated_genes":["SJAG_02665"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85493],"is_not":false,"summary":null,"term":"MONDO:0054791"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukodystrophy, hypomyelinating, 16","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1631337","DOID:0070405","UMLS:C4693779","OMIM:617964"],"synonyms":[{"name":"HLD16","type":"related"},{"name":"leukodystrophy, hypomyelinating, 16","type":"exact"}],"termid":"MONDO:0054791","terms_by_termid":{"MONDO:0054791":null},"xrefs":{"Monarch":{"xref_id":"0054791"}}}


id: MONDO:1010102
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Porphyria cutanea tarda that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"},{"relation_name":"is_a","term_name":"porphyria, non-human animal","termid":"MONDO:1011418"},{"relation_name":"is_a","term_name":"liver disorder, non-human animal","termid":"MONDO:1012967"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porphyria cutanea tarda, non-human animal","secondary_identifiers":["OMIA:001176"],"termid":"MONDO:1010102","xrefs":{"Monarch":{"xref_id":"1010102"}}}


id: GO:0018011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of the N-terminal alanine of proteins.","definition_xrefs":["RESID:AA0061","RESID:AA0062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid methylation","termid":"GO:0006480"},{"relation_name":"is_a","term_name":"peptidyl-alanine modification","termid":"GO:0018194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-alanine methylation","termid":"GO:0018011"}


id: PBO:0081097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 22","termid":"PBO:0081097"}


id: PBO:0116406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exomer complex BRCT domain subunit Cfr1/Chs5","termid":"PBO:0116406"}


id: GO:0033110
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the two lipid bilayers surrounding a Cvt vesicle, a vesicle that functions in the cytoplasm-to-vacuole targeting (Cvt) pathway.","definition_xrefs":["PMID:20065092","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"part_of","term_name":"Cvt vesicle","termid":"GO:0033107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"Cvt vesicle membrane","synonyms":[{"name":"cytoplasm to vacuole targeting vesicle membrane","type":"exact"},{"name":"cytoplasm-to-vacuole targeting vesicle membrane","type":"exact"}],"termid":"GO:0033110"}


id: PBO:0030346
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete,_unequal_mitotic_sister_chromatid_segregation,_with_unseparated_DNA","termid":"PBO:0030346"}


id: PBO:0004394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII cargo receptor subunit Sec23b (predicted)","termid":"PBO:0004394"}


id: PBO:0050196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 13","termid":"PBO:0050196"}


id: PBO:0072236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 11","termid":"PBO:0072236"}


id: GO:0090067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of the thalamus. The thalamus is a part of the diencephalon that is composed of the dorsal thalamus and the ventral thalamus.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure size","termid":"GO:0090066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of thalamus size","termid":"GO:0090067"}


id: FYPO:0000813
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which plasma membrane organization is abnormal. Plasma membrane organization results in the assembly, arrangement of constituent parts, or disassembly of the plasma membrane.","definition_xrefs":["GO:0007009","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endomembrane system organization","termid":"FYPO:0000804"},{"relation_name":"is_a","term_name":"abnormal membrane organization during vegetative growth","termid":"FYPO:0001351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal plasma membrane organization","synonyms":[{"name":"abnormal plasma membrane organisation","type":"exact"},{"name":"abnormal plasma membrane organization during mitotic cell cycle","type":"related"},{"name":"abnormal plasma membrane organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000813"}


id: PBO:0080264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 27 pseudogene","termid":"PBO:0080264"}


id: MONDO:0005088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rheumatoid arthritis (obsolete MONDO:0005088)","termid":"MONDO:0005088","xrefs":{"Monarch":{"xref_id":"0005088"}}}


id: MONDO:0001427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dieulafoy lesion is an abnormally large artery (a vessel that takes blood from the heart to other areas of the body) in the lining of the gastrointestinal system. It is most common in the stomach but can occur in other locations, including the small and large intestine. Dieulafoy lesions can cause severe and sudden gastrointestinal bleeding. The condition occurs in people of all ages, but is more common in males than in females.Depending upon the site of the bleeding, symptoms may include vomiting up blood (hematemesis); sticky, dark-colored stools (melena); passage of fresh blood in the stool (hematochezia); or coughing up blood (hemoptysis). Some affected individuals may only present with blood pressure problems. Treatment may include endoscopic and/or surgical techniques. Though treatment can be effective, Dieulafoy lesions and the associated blood loss can be fatal, especially if not diagnosed and treated promptly.","direct_ancestors":[{"relation_name":"is_a","term_name":"stomach disorder","termid":"MONDO:0004298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Dieulafoy lesion","secondary_identifiers":["DOID:12070","UMLS:C0341217","ICD9:537.84","ICD10CM:K31.82","SCTID:109558001","MEDGEN:574250"],"synonyms":[{"name":"Dieulafoy disease","type":"related"},{"name":"Dieulafoy lesion (hemorrhagic) of intestine","type":"exact"},{"name":"Dieulafoy lesion (hemorrhagic) of stomach and duodenum","type":"exact"},{"name":"Dieulafoy's lesion","type":"related"},{"name":"Exulceratio simplex Dieulafoy","type":"related"}],"termid":"MONDO:0001427","xrefs":{"Monarch":{"xref_id":"0001427"}}}


id: FYPO:0005348
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which spindle pole body (SPB)-led chromosome movement is abnormal. SPB-led chromosome movement is a microtubule-based process in which chromosomes migrate as a result of rapid spindle pole body (SPB) and centrosome oscillations during mitotic interphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body localization","termid":"FYPO:0000534"},{"relation_name":"is_a","term_name":"abnormal microtubule-based movement during vegetative growth","termid":"FYPO:0005461"},{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal spindle pole body-led chromosome movement during mitotic interphase","synonyms":[{"name":"abnormal SPB-led chromosome movement during mitotic interphase","type":"exact"},{"name":"abnormal maintenance of SPB localization","type":"related"},{"name":"abnormal maintenance of mitotic spindle pole body localization","type":"related"},{"name":"abnormal mitotic SPB oscillation during mitotic interphase","type":"exact"},{"name":"abnormal mitotic spindle pole body movement during mitotic interphase","type":"exact"},{"name":"abnormal mitotic spindle pole body oscillation during mitotic interphase","type":"exact"},{"name":"abnormal spindle pole body-led chromosome movement during interphase of mitotic cell cycle","type":"related"},{"name":"abnormal spindle pole body-led chromosome movement during mitotic interphase during vegetative growth","type":"exact"},{"name":"increased spindle pole body-led chromosome movement during interphase of mitotic cell cycle","type":"related"}],"termid":"FYPO:0005348"}


id: PBO:0082533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell-wall L-asparaginase II involved in asparagine catabolism; expression induced during nitrogen starvation; ORF contains a short non-coding RNA that enhances expression of full-length gene; likely arose in via horizontal gene transfer from the wine yeast Wickerhamomyces anomalus or a close relative; reference strain S288C has four copies of ASP3; ASP3-4 has a paralog, ASP3-2, that arose from a segmental duplication","termid":"PBO:0082533"}


id: PBO:0067797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 99","termid":"PBO:0067797"}


id: MONDO:0021492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the major salivary gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of major salivary gland","termid":"MONDO:0021368"},{"relation_name":"is_a","term_name":"benign neoplasm of salivary gland","termid":"MONDO:0021460"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of major salivary gland","secondary_identifiers":["UMLS:C0496858","MEDGEN:96923","NCIT:C4771","ICD9:210.2","SCTID:92205005"],"synonyms":[{"name":"benign Major salivary gland neoplasm","type":"exact"},{"name":"benign Major salivary gland tumor","type":"exact"},{"name":"benign Major salivary gland tumour","type":"exact"},{"name":"benign neoplasm of the Major salivary gland","type":"exact"},{"name":"benign tumor of Major salivary gland","type":"exact"},{"name":"benign tumor of the Major salivary gland","type":"exact"},{"name":"benign tumour of Major salivary gland","type":"exact"},{"name":"benign tumour of the Major salivary gland","type":"exact"},{"name":"major salivary gland benign neoplasm","type":"exact"}],"termid":"MONDO:0021492","xrefs":{"Monarch":{"xref_id":"0021492"}}}


id: FYPO:0000568
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mating projection assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly","termid":"FYPO:0000336"},{"relation_name":"is_a","term_name":"abnormal shmoo directionality","termid":"FYPO:0005791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000301"],"is_obsolete":false,"name":"abnormal shmoo formation","synonyms":[{"name":"abnormal conjugation tube formation","type":"exact"},{"name":"abnormal mating projection assembly","type":"exact"},{"name":"abnormal mating projection formation","type":"exact"},{"name":"abnormal shmoo assembly","type":"exact"},{"name":"shmoo formation: abnormal","type":"related"}],"termid":"FYPO:0000568"}


id: PBO:0080928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta pseudogene 6","termid":"PBO:0080928"}


id: MONDO:0014571
data:
  {"annotated_genes":["SJAG_01630","SJAG_03588"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84927,84928],"is_not":false,"summary":null,"term":"MONDO:0014571"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary optic atrophy","termid":"MONDO:0043878"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01630":null,"SJAG_03588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"optic atrophy 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111442","OMIM:616289","MEDGEN:898858","GARD:18199","UMLS:C4225384"],"synonyms":[{"name":"ACO2 autosomal recessive isolated optic atrophy","type":"exact"},{"name":"OPA9","type":"related"},{"name":"autosomal recessive isolated optic atrophy caused by mutation in ACO2","type":"exact"},{"name":"optic atrophy 9","type":"exact"}],"termid":"MONDO:0014571","terms_by_termid":{"MONDO:0014571":null},"xrefs":{"Monarch":{"xref_id":"0014571"}}}


id: GO:0052822
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: DNA containing 3-methylguanine + H2O = DNA with abasic site + 3-methylguanine. This reaction is the hydrolysis of DNA by cleavage of the N-C1' glycosidic bond between the damaged DNA 3-methylguanine and the deoxyribose sugar to remove the 3-methylguanine, leaving an abasic site.","definition_xrefs":["GOC:elh","PMID:9224623","PMID:10872450"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-3-methylbase glycosylase activity","termid":"GO:0043733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0140097","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"DNA-3-methylguanine glycosylase activity","termid":"GO:0052822"}


id: PBO:0039986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 6 interacting protein 1","termid":"PBO:0039986"}


id: GO:0052612
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: adonirubin + a reduced electron acceptor + oxygen = 3S,3'S-astaxanthin + an oxidized electron acceptor + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete adonirubin 3-hydroxylase activity (obsolete GO:0052612)","synonyms":[{"name":"beta-carotene hydroxylase activity","type":"broad"},{"name":"carotene beta-ring hydroxylase activity","type":"broad"}],"termid":"GO:0052612"}


id: FYPO:0005152
data:
  {"alleles_by_uniquename":{"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118980],"is_not":false,"summary":null,"term":"FYPO:0005152"}]},"cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of caspofungin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01787":null},"genotype_count":1,"genotypes_by_uniquename":{"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002682","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"resistance to caspofungin","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_01787"],"single_locus_genotype_uniquenames":["pck1delta"],"synonyms":[{"name":"resistance to caspofungin during mitotic cell cycle","type":"related"},{"name":"resistance to caspofungin during vegetative growth","type":"exact"},{"name":"resistant to caspofungin","type":"exact"}],"termid":"FYPO:0005152","terms_by_termid":{"FYPO:0005152":null,"FYPO_EXT:0000002":null}}


id: PBO:0053992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1311","termid":"PBO:0053992"}


id: PBO:0053324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 113","termid":"PBO:0053324"}


id: MONDO:0700003
data:
  {"annotated_genes":["SJAG_01156"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032747"}]},"cv_name":"mondo","definition":"Disorder associated with pregnancy, childbirth, and puerperium.","direct_ancestors":[{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01156":null},"genotype_count":0,"is_obsolete":false,"name":"obstetric disorder","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0700003","terms_by_termid":{"MONDO:0032747":null},"xrefs":{"Monarch":{"xref_id":"0700003"}}}


id: GO:0044312
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transient, cytoplasmic organelle found in Plasmodium species that resembles a cytoplasmic inclusion body and whose function is poorly understood. Crystalloids form in ookinetes and disappear after ookinete-to-oocyst transformation.","definition_xrefs":["GOC:jl","PMID:19932717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"crystalloid","termid":"GO:0044312"}


id: PBO:0079207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor suppressing subtransferable candidate 4","termid":"PBO:0079207"}


id: PBO:0055905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 28","termid":"PBO:0055905"}


id: PBO:0072807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 4A","termid":"PBO:0072807"}


id: PBO:0070499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 34","termid":"PBO:0070499"}


id: PBO:0031503
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_actinomycin_D","termid":"PBO:0031503"}


id: GO:0015951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which a purine ribonucleotide is synthesized from another purine ribonucleotide.","definition_xrefs":["ISBN:0471394831","ISBN:0306444747","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine nucleotide interconversion","termid":"GO:0015950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"purine ribonucleotide interconversion","termid":"GO:0015951"}


id: GO:0097441
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dendrite that emerges near the basal pole of a neuron. In bipolar neurons, basal dendrites are either on the same side of the soma as the axon, or project toward the axon.","definition_xrefs":["PMID:17046728","NIF_Subcellular:sao1079900774","GOC:aruk","GOC:bc","PMID:22683681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basal dendrite","synonyms":[{"name":"basilar dendrite","type":"exact"}],"termid":"GO:0097441"}


id: PBO:0014300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific protein","termid":"PBO:0014300"}


id: PR:P40996
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- scd2 gene.","definition_xrefs":["UniProtKB:P40996","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein scd2/ral3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.07","synonyms":[{"name":"Spom972h-scd2","type":"exact"}],"termid":"PR:P40996"}


id: GO:0047746
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chlorophyll + H2O = phytol + chlorophyllide.","definition_xrefs":["RHEA:19605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"chlorophyllase activity","secondary_identifiers":["MetaCyc:CHLOROPHYLLASE-RXN","EC:3.1.1.14"],"synonyms":[{"name":"chlorophyll chlorophyllidohydrolase activity","type":"related"}],"termid":"GO:0047746"}


id: MONDO:0015639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign partial epilepsy with secondarily generalized seizures in infancy is a rare infantile epilepsy syndrome characterized by seizures presenting with motion arrest and staring. They are followed by generalized tonic-clonic convulsions with normal interictal EEG and focal paroxysmal discharges, followed by generalization in ictal EEG. Seizures usually occur in clusters and are responsive to treatment. Psychomotor development is normal.","definition_xrefs":["Orphanet:166302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign non-familial infantile seizures","termid":"MONDO:0015637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"benign partial epilepsy with secondarily generalized seizures in infancy","secondary_identifiers":["GARD:20073","MEDGEN:1656339","UMLS:C4749728","icd11.foundation:413225821"],"termid":"MONDO:0015639","xrefs":{"Monarch":{"xref_id":"0015639"}}}


id: PBO:0018195
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe PNuts","termid":"PBO:0018195"}


id: PBO:0072685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUN domain containing 3A","termid":"PBO:0072685"}


id: GO:0036215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stem cell factor (SCF) stimulus.","definition_xrefs":["GOC:uh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to stem cell factor","synonyms":[{"name":"response to KIT ligand","type":"exact"},{"name":"response to SCF","type":"exact"},{"name":"response to hematopoietic growth factor KL","type":"exact"},{"name":"response to stem cell factor stimulus","type":"exact"}],"termid":"GO:0036215"}


id: GO:0050573
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dTDP-D-fucose + NADP+ = dTDP-4-dehydro-6-deoxy-alpha-D-glucose + H+ + NADPH.","definition_xrefs":["EC:1.1.1.266","RHEA:36583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"dTDP-4-dehydro-6-deoxyglucose reductase activity","secondary_identifiers":["KEGG_REACTION:R05687","MetaCyc:1.1.1.266-RXN"],"synonyms":[{"name":"dTDP-4-keto-6-deoxyglucose reductase activity","type":"related"},{"name":"dTDP-D-fucose:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050573"}


id: GO:0039667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The uptake of a virus or viral genetic material into a host cell which occurs through retraction of a virion-bound pilus.","definition_xrefs":["VZ:981","GOC:bf","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete viral entry into host cell via pilus retraction (obsolete GO:0039667)","termid":"GO:0039667"}


id: PBO:0057914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3617","termid":"PBO:0057914"}


id: MONDO:0005144
data:
  {"annotated_genes":["SJAG_00053","SJAG_03170","SJAG_00668","SJAG_04489","SJAG_07000","SJAG_03923","SJAG_02289","SJAG_02509","SJAG_02695","SJAG_02242","SJAG_04178","SJAG_04387","SJAG_01317","SJAG_03598","SJAG_03345"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859529"},{"annotations":[84731,86762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007103"},{"annotations":[86264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012945"},{"annotations":[86375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010459"},{"annotations":[85139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013715"},{"annotations":[84886,84885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014531"},{"annotations":[85999,86000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011223"},{"annotations":[86126,86127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012077"},{"annotations":[86231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013501"},{"annotations":[84812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010936"},{"annotations":[86752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008458"}]},"cv_name":"mondo","definition":"An instance of amyotrophic lateral sclerosis that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amyotrophic lateral sclerosis","termid":"MONDO:0004976"},{"relation_name":"is_a","term_name":"hereditary motor neuron disease","termid":"MONDO:0024257"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00668":null,"SJAG_01317":null,"SJAG_02242":null,"SJAG_02289":null,"SJAG_02509":null,"SJAG_02695":null,"SJAG_03170":null,"SJAG_03345":null,"SJAG_03598":null,"SJAG_03923":null,"SJAG_04178":null,"SJAG_04387":null,"SJAG_04489":null,"SJAG_07000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"familial amyotrophic lateral sclerosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1642547","EFO:0001356","OMIMPS:105400","UMLS:C4551993"],"synonyms":[{"name":"hereditary amyotrophic lateral sclerosis","type":"exact"}],"termid":"MONDO:0005144","terms_by_termid":{"MONDO:0007103":null,"MONDO:0008458":null,"MONDO:0010459":null,"MONDO:0010936":null,"MONDO:0011223":null,"MONDO:0012077":null,"MONDO:0012945":null,"MONDO:0013501":null,"MONDO:0013715":null,"MONDO:0014531":null,"MONDO:0859529":null},"xrefs":{"Monarch":{"xref_id":"0005144"}}}


id: PBO:0034489
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_reverse_centromeric_outer_repeat_transcript_level","termid":"PBO:0034489"}


id: PBO:0003809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIIH complex cyclin Mcs2","termid":"PBO:0003809"}


id: MONDO:0100519
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, idiopathic generalized, susceptibility to, 17","secondary_identifiers":["OMIM:602477","UMLS:C5561931","MEDGEN:1794141"],"synonyms":[{"name":"EIG17","type":"exact"}],"termid":"MONDO:0100519","xrefs":{"Monarch":{"xref_id":"0100519"}}}


id: GO:0071720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, sodium-independent, movement of prostaglandins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin transport","termid":"GO:0015732"},{"relation_name":"is_a","term_name":"sodium-independent icosanoid transport","termid":"GO:0071718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"sodium-independent prostaglandin transport","termid":"GO:0071720"}


id: PATO:0000623
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's protruding or projecting from the body.","definition_xrefs":["sdvc:sdvc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protruding","termid":"PATO:0001598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exserted","synonyms":[{"name":"prolapse","type":"related"},{"name":"prolapsed","type":"related"}],"termid":"PATO:0000623"}


id: MONDO:0002475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the lacrimal gland","direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal gland carcinoma","termid":"MONDO:0002463"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"lacrimal gland adenocarcinoma","secondary_identifiers":["SCTID:254988008","UMLS:C0346341","NCIT:C4541","MEDGEN:87556","DOID:298"],"synonyms":[{"name":"adenocarcinoma of lacrimal gland","type":"exact"},{"name":"adenocarcinoma of the lacrimal gland","type":"exact"},{"name":"lacrimal gland adenocarcinoma","type":"exact"}],"termid":"MONDO:0002475","xrefs":{"Monarch":{"xref_id":"0002475"}}}


id: PBO:0088376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi phosphoenolpyruvate transmembrane transporter Pet2","termid":"PBO:0088376"}


id: GO:0060790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which the tooth placode forms. A tooth placode is a thickening of the ectoderm that will give rise to the tooth bud.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal placode formation","termid":"GO:0060788"},{"relation_name":"part_of","term_name":"odontogenesis of dentin-containing tooth","termid":"GO:0042475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tooth placode formation","termid":"GO:0060790"}


id: PBO:0091081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk21/Pdk1","termid":"PBO:0091081"}


id: MONDO:0010101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Teebi-Shaltout syndrome is a rare, genetic, development defect during embryogenesis malformation syndrome characterized by association of characteristic facial features (including abnormal head shape with narrow forehead, hypertelorism, telecanthus, small earlobes, broad nasal bridge and tip, underdeveloped ala nasi, small/wide mouth and high/cleft palate), ectodermal dysplasia (including oligodontia with delayed dentition, slow growing hair and reduced sweating) and skeletal abnormalities including camptodactyly and caudal appendage. Short stature and abnormal palmar creases are additional clinical features.","definition_xrefs":["Orphanet:3291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Teebi-Shaltout syndrome","secondary_identifiers":["MESH:C536950","UMLS:C1848912","MEDGEN:376472","OMIM:272950","GARD:5125"],"synonyms":[{"name":"TBSH","type":"related"},{"name":"Teebi Shaltout syndrome","type":"related"},{"name":"Teebi-Shaltout syndrome","type":"exact"},{"name":"craniofacial anomalies, abnormal hair, camptodactyly, and caudal appendage","type":"related"}],"termid":"MONDO:0010101","xrefs":{"Monarch":{"xref_id":"0010101"}}}


id: GO:0072549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: monocoumaroyl dicaffeoyl spermidine + NADPH + O2 = tricaffeoyl spermidine + NADP+ + H2O.","definition_xrefs":["GOC:kad","PMID:19779199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tri-(coumaroyl or caffeoyl) spermidine meta-hydroxylase activity","termid":"GO:0072533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"monocoumaroyl dicaffeoyl spermidine meta-hydroxylase activity","termid":"GO:0072549"}


id: PBO:0086453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative membrane-localized protein of unknown function","termid":"PBO:0086453"}


id: PBO:0000669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Alanine","termid":"PBO:0000669"}


id: MONDO:0014082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"cryptosporidiosis-chronic cholangitis-liver disease syndrome","secondary_identifiers":["OMIM:615207","MEDGEN:767601","Orphanet:357329","GARD:17550","DOID:0111982","UMLS:C3554687"],"synonyms":[{"name":"IL21R immunodeficiency","type":"related"},{"name":"IMD56","type":"related"},{"name":"cryptosporidiosis-chronic cholangitis-liver disease syndrome","type":"exact"},{"name":"immunodeficiency 56","type":"related"}],"termid":"MONDO:0014082","xrefs":{"Monarch":{"xref_id":"0014082"}}}


id: PBO:0064425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin like phospholipase domain containing 3","termid":"PBO:0064425"}


id: MONDO:0005198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intraepithelial neoplasia of the vulvar squamous epithelium. There is no evidence of invasion. This category includes vulvar high grade squamous intraepithelial lesion and vulvar intraepithelial neoplasia, differentiated type.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar squamous neoplasm","termid":"MONDO:0002195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vulvar intraepithelial neoplasia","secondary_identifiers":["NCIT:C4756","EFO:0002627","GARD:19876","MEDGEN:91093","Orphanet:137583","UMLS:C0346210"],"synonyms":[{"name":"VIN","type":"exact"},{"name":"intraepithelial neoplasia of the vulva","type":"exact"},{"name":"intraepithelial neoplasia of vulva","type":"exact"},{"name":"squamous vulvar intraepithelial neoplasia","type":"exact"},{"name":"vulva intraepithelial neoplasia","type":"exact"},{"name":"vulval intraepithelial neoplasia","type":"exact"},{"name":"vulvar intraepithelial tumor","type":"exact"},{"name":"vulvar intraepithelial tumour","type":"exact"}],"termid":"MONDO:0005198","xrefs":{"Monarch":{"xref_id":"0005198"}}}


id: PBO:0053564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 575","termid":"PBO:0053564"}


id: GO:2000700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac muscle cell myoblast differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myoblast differentiation","termid":"GO:0045663"},{"relation_name":"is_a","term_name":"positive regulation of cardioblast differentiation","termid":"GO:0051891"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell myoblast differentiation","termid":"GO:2000690"},{"relation_name":"positively_regulates","term_name":"cardiac muscle cell myoblast differentiation","termid":"GO:0060379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle cell myoblast differentiation","synonyms":[{"name":"positive regulation of cardiac myoblast differentiation","type":"related"},{"name":"positive regulation of myocardial precursor cell differentiation","type":"exact"}],"termid":"GO:2000700"}


id: PBO:0068437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 7, pseudogene","termid":"PBO:0068437"}


id: PBO:0081480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 355, pseudogene","termid":"PBO:0081480"}


id: PBO:0050787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 3A","termid":"PBO:0050787"}


id: PBO:0070258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U11 small nuclear 3, pseudogene","termid":"PBO:0070258"}


id: PBO:0075438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPANX family member N3","termid":"PBO:0075438"}


id: GO:0030430
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cytoplasm of a host cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular part","termid":"GO:0033646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell cytoplasm","secondary_identifiers":["GO:0097679"],"synonyms":[{"name":"other organism cytoplasm","type":"related"}],"termid":"GO:0030430"}


id: PBO:0016556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR adaptor protein, human endophilin-A2 ortholog, implicated in endocytosis","termid":"PBO:0016556"}


id: PR:O94579
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit alpha type-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04818","PANTHER:PTHR11599:SF16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha type-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.06","secondary_identifiers":["UniProtKB:O94579"],"synonyms":[{"name":"Spom972h-PSMA2","type":"exact"}],"termid":"PR:O94579"}


id: MONDO:0009158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ehlers-Danlos syndromes (EDS) form a heterogeneous group of inherited connective tissue disorders characterized by variable joint hypermobility and cutaneous hyperextensibility. Type X is distinguished by platelet dysfunction associated with a fibronectin abnormality. Type X EDS has been described in only one family so far. Age of onset is about 13-25 years. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:75501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"},{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Ehlers-Danlos syndrome, fibronectinemic type","secondary_identifiers":["SCTID:83586000","MEDGEN:346497","OMIM:225310","UMLS:C1857038","MESH:C565600"],"synonyms":[{"name":"EDS 10","type":"related"},{"name":"EDS X","type":"exact"},{"name":"EDS10 (formerly)","type":"related"},{"name":"Ehlers-Danlos syndrome type 10","type":"exact"},{"name":"Ehlers-Danlos syndrome type 10 (formerly)","type":"related"},{"name":"Ehlers-Danlos syndrome with platelet dysfunction from fibronectin abnormality","type":"exact"},{"name":"Ehlers-Danlos syndrome, dysfibronectinemic type","type":"related"},{"name":"Ehlers-Danlos syndrome, fibronectin-deficient","type":"exact"},{"name":"Ehlers-Danlos syndrome, type 10","type":"related"},{"name":"Ehlers-Danlos syndrome, type X (formerly)","type":"related"},{"name":"FN Abnormality","type":"related"}],"termid":"MONDO:0009158","xrefs":{"Monarch":{"xref_id":"0009158"}}}


id: GO:2000744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of anterior head development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of anterior head development","termid":"GO:2000742"},{"relation_name":"positively_regulates","term_name":"anterior head development","termid":"GO:0097065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of anterior head development","termid":"GO:2000744"}


id: PBO:0076022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 17b","termid":"PBO:0076022"}


id: GO:0044553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a biological quality in another organism. A biological quality is a measurable attribute of an organism or part of an organism, such as size, mass, shape, color, etc.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of process of another organism","termid":"GO:0035821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of biological quality in another organism","synonyms":[{"name":"modulation of biological quality in other organism","type":"exact"},{"name":"regulation of biological quality in other organism","type":"exact"}],"termid":"GO:0044553"}


id: MONDO:0001955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dysentery that involves protozoan infection.","definition_xrefs":["DOID:14397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysentery","termid":"MONDO:0001517"},{"relation_name":"is_a","term_name":"protozoa infectious disease","termid":"MONDO:0002428"},{"relation_name":"is_a","term_name":"parasitic intestinal disorder","termid":"MONDO:0024270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"protozoal dysentery","secondary_identifiers":["ICD9:007.8","MEDGEN:1843396","UMLS:C2142761"],"termid":"MONDO:0001955","xrefs":{"Monarch":{"xref_id":"0001955"}}}


id: MONDO:0007464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Isolated distichiasis is a rare congenital eyelid anomaly characterized by an accessory row of eyelashes (that may be partial or complete) posterior to the normal row of cilia, at or close to the meibomian gland orifices, that is not associated with any other condition, and that may lead to ocular irritation and corneal damage if left untreated.","definition_xrefs":["Orphanet:99177"],"gene_count":0,"genotype_count":0,"name":"obsolete isolated distichiasis (obsolete MONDO:0007464)","secondary_identifiers":["ICD9:743.63","OMIM:126300","SCTID:95339000"],"synonyms":[{"name":"distichiasis","type":"related"},{"name":"eyelashes, two rows of","type":"related"}],"termid":"MONDO:0007464","xrefs":{"Monarch":{"xref_id":"0007464"}}}


id: GO:0019557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-histidine into other compounds, including glutamate and formate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate metabolic process","termid":"GO:0006536"},{"relation_name":"is_a","term_name":"L-histidine catabolic process","termid":"GO:0006548"},{"relation_name":"is_a","term_name":"formate metabolic process","termid":"GO:0015942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-histidine catabolic process to glutamate and formate","synonyms":[{"name":"histidine breakdown to glutamate and formate","type":"exact"},{"name":"histidine catabolic process to glutamate and formate","type":"broad"},{"name":"histidine degradation to glutamate and formate","type":"exact"}],"termid":"GO:0019557"}


id: PR:Q96VG1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TP53-regulated inhibitor of apoptosis 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02571","PRO:DNx","PANTHER:PTHR21329:SF8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C119.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.18","secondary_identifiers":["UniProtKB:Q96VG1"],"synonyms":[{"name":"Spom972h-TRIAP1","type":"exact"}],"termid":"PR:Q96VG1"}


id: GO:1900493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of [4Fe-4S] cluster assembly.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of [4Fe-4S] cluster assembly","termid":"GO:1900491"},{"relation_name":"is_a","term_name":"positive regulation of iron-sulfur cluster assembly","termid":"GO:1903331"},{"relation_name":"positively_regulates","term_name":"[4Fe-4S] cluster assembly","termid":"GO:0044572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016226"},{"rel_name":"regulates","termid":"GO:0016226"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0016226","GO:0008150"],"is_obsolete":false,"name":"positive regulation of [4Fe-4S] cluster assembly","synonyms":[{"name":"activation of 4Fe-4S cluster assembly","type":"narrow"},{"name":"activation of [4Fe-4S] cluster assembly","type":"narrow"},{"name":"activation of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"positive regulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"positive regulation of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"up regulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"up regulation of [4Fe-4S] cluster assembly","type":"exact"},{"name":"up regulation of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"up-regulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"up-regulation of [4Fe-4S] cluster assembly","type":"exact"},{"name":"up-regulation of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"upregulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"upregulation of [4Fe-4S] cluster assembly","type":"exact"},{"name":"upregulation of [4Fe-4S] cluster biosynthetic process","type":"related"}],"termid":"GO:1900493"}


id: GO:0072739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an anisomycin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to anisomycin","termid":"GO:0072739"}


id: PBO:0087124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA 5'-triphosphatase involved in mRNA 5' capping; subunit of mRNA capping enzyme, which is a heterotetramer composed of a Cet1p homodimer and two molecules of guanylyltransferase Ceg1p; Cet1p also has a role in regulation of RNAPII pausing at promoter-proximal sites; interaction between Cet1p and Ceg1p is required for Ceg1p nuclear import; mammalian enzyme is single bifunctional polypeptide; human homolog RNGTT can complement yeast cet1 null mutant","termid":"PBO:0087124"}


id: PBO:0067821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 123","termid":"PBO:0067821"}


id: MONDO:0859277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with muscle tone abnormalities and distal skeletal defects","secondary_identifiers":["MEDGEN:1823972","UMLS:C5774199","OMIM:620007"],"termid":"MONDO:0859277","xrefs":{"Monarch":{"xref_id":"0859277"}}}


id: MONDO:0015861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare uterine adnexal tumor (obsolete MONDO:0015861)","secondary_identifiers":["Orphanet:180220"],"synonyms":[{"name":"syn: Rare tumor of ovaries and fallopian tubes","type":"exact"}],"termid":"MONDO:0015861","xrefs":{"Monarch":{"xref_id":"0015861"}}}


id: PR:Q9USY2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A squamous cell carcinoma antigen recognized by T-cells 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04004","PRO:DNx","PANTHER:PTHR23269:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C1861.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1861.04c","secondary_identifiers":["UniProtKB:Q9USY2"],"synonyms":[{"name":"Spom972h-SART3","type":"exact"}],"termid":"PR:Q9USY2"}


id: MONDO:0012430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any dysequilibrium syndrome in which the cause of the disease is a mutation in the WDR81 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar ataxia, intellectual disability, and dysequilibrium","termid":"MONDO:0009133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"cerebellar ataxia, intellectual disability, and dysequilibrium syndrome 2","secondary_identifiers":["OMIM:610185","MEDGEN:412914","UMLS:C2750234","DOID:0070557","GARD:15473","MESH:C567656"],"synonyms":[{"name":"CAMRQ2","type":"related"},{"name":"WDR81 dysequilibrium syndrome","type":"exact"},{"name":"cerebellar ataxia and intellectual disability with or without quadrupedal locomotion 2","type":"related"},{"name":"cerebellar ataxia and mental retardation with or without quadrupedal locomotion 2","type":"related"},{"name":"cerebellar ataxia, intellectual disability, and dysequilibrium syndrome 2","type":"exact"},{"name":"cerebellar ataxia, intellectual disability, and dysequilibrium syndrome type 2","type":"exact"},{"name":"cerebellar ataxia, mental retardation, and dysequilibrium syndrome 2","type":"exact"},{"name":"cerebellar ataxia, mental retardation, and dysequilibrium syndrome type 2","type":"exact"},{"name":"dysequilibrium syndrome caused by mutation in WDR81","type":"exact"}],"termid":"MONDO:0012430","xrefs":{"Monarch":{"xref_id":"0012430"}}}


id: MONDO:0000983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by recurrent sexual urges, fantasies, or behaviors involving the exposure of one's genitals to an unsuspecting stranger.","definition_xrefs":["NCIT:C94352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paraphilic disorder","termid":"MONDO:0000596"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exhibitionism","secondary_identifiers":["MEDGEN:41913","UMLS:C0015269","ICD10CM:F65.2","MESH:D005084","DOID:10236","ICD9:302.4","SCTID:58349009"],"termid":"MONDO:0000983","xrefs":{"Monarch":{"xref_id":"0000983"}}}


id: PBO:0048456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCC2 antisense RNA 1","termid":"PBO:0048456"}


id: PBO:0003314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine synthetase","termid":"PBO:0003314"}


id: MONDO:0014854
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the CD164 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 66","secondary_identifiers":["DOID:0110587","MEDGEN:924418","GARD:18146","UMLS:C4283893","OMIM:616969"],"synonyms":[{"name":"CD164 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"DFNA66","type":"narrow"},{"name":"autosomal dominant deafness 66","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 66","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in CD164","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 66","type":"narrow"},{"name":"deafness, autosomal dominant 66","type":"narrow"},{"name":"deafness, autosomal dominant type 66","type":"narrow"}],"termid":"MONDO:0014854","xrefs":{"Monarch":{"xref_id":"0014854"}}}


id: PBO:0063040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAK6 antisense RNA 1","termid":"PBO:0063040"}


id: GO:0004278
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage of Asp-Xaa > Asn-Xaa > Met-Xaa, Ser-Xaa.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete granzyme B activity (obsolete GO:0004278)","synonyms":[{"name":"CCP1 proteinase","type":"narrow"},{"name":"CCPII","type":"related"},{"name":"CTLA1","type":"related"},{"name":"cytotoxic cell proteinase-1","type":"related"},{"name":"cytotoxic t-lymphocyte proteinase 2 activity","type":"narrow"},{"name":"granzyme B activity","type":"exact"},{"name":"granzyme G","type":"related"},{"name":"granzyme H","type":"related"}],"termid":"GO:0004278"}


id: PBO:0040574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-glucuronyltransferase 1","termid":"PBO:0040574"}


id: PBO:0030442
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_tRNA_methylation","termid":"PBO:0030442"}


id: GO:0050655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dermatan sulfate proteoglycan, any glycoprotein whose glycosaminoglycan units are dermatan sulfate (chondroitin sulfate B). Dermatan sulfate is a glycosaminoglycan with repeats consisting of beta-(1,4)-linked L-iduronyl-beta-(1,3)-N-acetyl-D-galactosamine 4-sulfate units.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan metabolic process","termid":"GO:0006029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dermatan sulfate proteoglycan metabolic process","synonyms":[{"name":"chondroitin sulfate B proteoglycan metabolic process","type":"exact"},{"name":"chondroitin sulfate B proteoglycan metabolism","type":"exact"},{"name":"dermatan sulfate proteoglycan metabolism","type":"exact"},{"name":"dermatan sulphate proteoglycan metabolic process","type":"exact"},{"name":"dermatan sulphate proteoglycan metabolism","type":"exact"}],"termid":"GO:0050655"}


id: GO:0008215
data:
  {"annotated_genes":["SJAG_03632"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006597"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving spermine, a polybasic amine found in human sperm, in ribosomes and in some viruses, which is involved in nucleic acid packaging. Synthesis is regulated by ornithine decarboxylase which plays a key role in control of DNA replication.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine metabolic process","termid":"GO:0006595"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03632":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"spermine metabolism","type":"exact"}],"termid":"GO:0008215","terms_by_termid":{"GO:0006597":null}}


id: MOD:00734
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with an N-acetylgalactosamine group through a glycosidic bond.","definition_xrefs":["DeltaMass:247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylhexosaminylated residue","termid":"MOD:00436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N-acetylaminogalactosylated","synonyms":[{"name":"GalNAc","type":"exact"},{"name":"N-acetylhexosamines (GalNAc, GlcNAc)","type":"exact"}],"termid":"MOD:00734"}


id: PBO:0031805
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_G1/S_phase_transition","termid":"PBO:0031805"}


id: GO:0042300
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2,3-epoxysqualene = beta-amyrin.","definition_xrefs":["RHEA:31007","PMID:9746369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidosqualene cyclase activity","termid":"GO:0031559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"beta-amyrin synthase activity","secondary_identifiers":["EC:5.4.99.39","MetaCyc:RXN-7570"],"synonyms":[{"name":"2,3-oxidosqualene beta-amyrin cyclase","type":"exact"},{"name":"oxidosqualene:beta-amyrin cyclase activity","type":"exact"}],"termid":"GO:0042300"}


id: GO:0072389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of flavin adenine dinucleotide, which acts as a coenzyme or prosthetic group of various flavoprotein oxidoreductase enzymes.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide catabolic process","termid":"GO:0009166"},{"relation_name":"is_a","term_name":"flavin-containing compound catabolic process","termid":"GO:0042728"},{"relation_name":"is_a","term_name":"flavin adenine dinucleotide metabolic process","termid":"GO:0072387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"flavin adenine dinucleotide catabolic process","synonyms":[{"name":"FAD or FADH2 catabolic process","type":"exact"},{"name":"flavin adenine dinucleotide breakdown","type":"exact"},{"name":"flavin adenine dinucleotide catabolism","type":"exact"},{"name":"flavin adenine dinucleotide degradation","type":"exact"}],"termid":"GO:0072389"}


id: GO:0046773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts translation termination of host mRNAs. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host gene expression","termid":"GO:0039656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host translation termination","synonyms":[{"name":"suppression by virus of host translation termination","type":"narrow"},{"name":"viral inhibition of termination of host cell protein biosynthesis","type":"narrow"},{"name":"viral inhibition of termination of host cell protein biosynthetic process","type":"narrow"},{"name":"viral suppression of termination by host of host cell protein biosynthesis","type":"narrow"},{"name":"viral suppression of termination by host of host cell protein biosynthetic process","type":"narrow"}],"termid":"GO:0046773"}


id: GO:0062148
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-gamma-glutamyl-L-propargylglycine + O2 = CO2 + L-gamma-glutamyl-(3R)-L-beta-ethynylserine + succinate.","definition_xrefs":["RHEA:59900","PMID:30867596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"L-gamma-glutamyl-L-propargylglycine hydroxylase activity","termid":"GO:0062148"}


id: PBO:0087169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit C82","termid":"PBO:0087169"}


id: FYPO:0002522
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the export of polyadenylated mRNA from the nucleus is decreased. Export of all polyadenylated mRNAs or a specific mRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased nuclear polyadenylated mRNA level during vegetative growth","termid":"FYPO:0003119"},{"relation_name":"is_a","term_name":"abnormal poly(A)+ mRNA export from nucleus","termid":"FYPO:0000183"},{"relation_name":"is_a","term_name":"decreased nuclear export","termid":"FYPO:0000508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased poly(A)+ mRNA export from nucleus","synonyms":[{"name":"decreased poly(A)+ mRNA export from nucleus during mitotic cell cycle","type":"related"},{"name":"decreased poly(A)+ mRNA export from nucleus during vegetative growth","type":"exact"},{"name":"decreased polyadenylated mRNA export from nucleus","type":"exact"},{"name":"reduced poly(A)+ mRNA export from nucleus","type":"exact"}],"termid":"FYPO:0002522"}


id: PBO:0082575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chitin synthase III; catalyzes the transfer of N-acetylglucosamine (GlcNAc) to chitin; required for synthesis of the majority of cell wall chitin, the chitin ring during bud emergence, and spore wall chitosan; contains overlapping di-leucine and di-acidic signals that mediate, respectively, intracellular trafficking by AP-1 and trafficking to plasma membrane by exomer complex; requires AP-3 complex for its intracellular retention","termid":"PBO:0082575"}


id: PBO:0063340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PEST proteolytic signal containing nuclear protein","termid":"PBO:0063340"}


id: GO:1900011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of corticotropin-releasing hormone receptor activity.","definition_xrefs":["GOC:TermGenie","PMID:18234674","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"negative regulation of signaling receptor activity","termid":"GO:2000272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of corticotropin-releasing hormone receptor activity","synonyms":[{"name":"down regulation of CRF receptor activity","type":"exact"},{"name":"down regulation of CRH receptor activity","type":"exact"},{"name":"down regulation of adrenocorticotropin-releasing hormone receptor activity","type":"exact"},{"name":"down regulation of corticotropin-releasing factor receptor activity","type":"exact"},{"name":"down regulation of corticotropin-releasing hormone receptor activity","type":"related"},{"name":"negative regulation of CRF receptor activity","type":"exact"},{"name":"negative regulation of CRH receptor activity","type":"exact"},{"name":"negative regulation of adrenocorticotropin-releasing hormone receptor activity","type":"exact"},{"name":"negative regulation of corticotropin-releasing factor receptor activity","type":"exact"}],"termid":"GO:1900011"}


id: GO:0004827
data:
  {"annotated_genes":["SJAG_01259","SJAG_02236"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105417,106606],"is_not":false,"summary":null,"term":"GO:0004827"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-proline + tRNA(Pro) = AMP + diphosphate + L-prolyl-tRNA(Pro).","definition_xrefs":["EC:6.1.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01259":null,"SJAG_02236":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140101","GO:0016874","GO:0003824","GO:0140098"],"is_obsolete":false,"name":"proline-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-379865","MetaCyc:PROLINE--TRNA-LIGASE-RXN","Reactome:R-HSA-380198","RHEA:14305"],"synonyms":[{"name":"L-proline:tRNAPro ligase (AMP-forming)","type":"related"},{"name":"proline translase activity","type":"related"},{"name":"prolinyl-tRNA ligase activity","type":"related"},{"name":"prolyl-s-RNA synthetase activity","type":"related"},{"name":"prolyl-tRNA synthetase activity","type":"exact"},{"name":"prolyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"prolyl-transfer ribonucleic acid synthetase activity","type":"related"},{"name":"prolyl-transferRNA synthetase activity","type":"related"}],"termid":"GO:0004827","terms_by_termid":{"GO:0004827":null}}


id: PR:Q92352
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An actin-related protein 2/3 complex subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-related protein 2/3 complex subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.07c","secondary_identifiers":["UniProtKB:Q92352"],"synonyms":[{"name":"SPAC6G9.07c","type":"related"},{"name":"Spom972h-ARPC4","type":"exact"},{"name":"arp2/3 complex 20 kDa (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"arp20","type":"related"},{"name":"p20-ARC (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92352"}


id: FYPO:0004287
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of double-strand break repair via nonhomologous end joining (NHEJ) is decreased. NHEJ is the repair of double-strand breaks in DNA in which the two broken ends are rejoined with little or no sequence complementarity.","definition_xrefs":["GO:0006303","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased double-strand break repair during vegetative growth","termid":"FYPO:0003660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000002","FYPO:0000298","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased double-strand break repair via nonhomologous end joining","synonyms":[{"name":"decreased NHEJ","type":"exact"},{"name":"decreased double-strand break repair via nonhomologous end joining during mitotic cell cycle","type":"related"},{"name":"decreased double-strand break repair via nonhomologous end joining during vegetative growth","type":"exact"},{"name":"decreased nonhomologous end joining","type":"exact"},{"name":"reduced double-strand break repair via nonhomologous end joining","type":"exact"}],"termid":"FYPO:0004287"}


id: PBO:0062721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily S member 1","termid":"PBO:0062721"}


id: MONDO:0008119
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinocerebellar ataxia type 1 (SCA1) is a subtype of type I autosomal dominant cerebellar ataxia (ADCA type I) characterized by dysarthria, writing difficulties, limb ataxia, and commonly nystagmus and saccadic abnormalities.","definition_xrefs":["Orphanet:98755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Huntington disease-like syndrome","termid":"MONDO:0015548"},{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0000426","MONDO:0002039"],"is_obsolete":false,"name":"spinocerebellar ataxia type 1","secondary_identifiers":["icd11.foundation:2071487961","DOID:0050954","MEDGEN:155703","SCTID:715748006","UMLS:C0752120","NANDO:1200045","OMIM:164400","GARD:4071","NCIT:C129982"],"synonyms":[{"name":"ATXN1 autosomal dominant cerebellar ataxia type I","type":"exact"},{"name":"Menzel type OPCA","type":"related"},{"name":"OPCA 1","type":"related"},{"name":"OPCA 4","type":"related"},{"name":"OPCA1","type":"related"},{"name":"OPCA4","type":"related"},{"name":"SCA1","type":"exact"},{"name":"Sca1","type":"exact"},{"name":"Schut-haymaker type OPCA","type":"related"},{"name":"autosomal dominant cerebellar ataxia type I caused by mutation in ATXN1","type":"exact"},{"name":"cerebelloparenchymal disorder 1","type":"related"},{"name":"olivopontocerebellar atrophy 1","type":"related"},{"name":"olivopontocerebellar atrophy 4","type":"related"},{"name":"spinocerebellar ataxia 1","type":"related"},{"name":"spinocerebellar ataxia type 1","type":"exact"},{"name":"spinocerebellar atrophy 1","type":"related"}],"termid":"MONDO:0008119","xrefs":{"Monarch":{"xref_id":"0008119"}}}


id: MONDO:0001988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tooth resorption","termid":"MONDO:0001670"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"external pathological resorption","secondary_identifiers":["ICD9:521.42","MEDGEN:540236","DOID:14529","UMLS:C0266878","SCTID:41918006"],"termid":"MONDO:0001988","xrefs":{"Monarch":{"xref_id":"0001988"}}}


id: PBO:0063133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0063133"}


id: MONDO:0700165
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thyroid gland medullary carcinoma occurring in a dog.","definition_xrefs":["NCIT:C161006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine thyroid adenocarcinoma","termid":"MONDO:0700155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine thyroid gland medullary carcinoma","termid":"MONDO:0700165","xrefs":{"Monarch":{"xref_id":"0700165"}}}


id: MONDO:0002378
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mature teratoma characterized by the presence of a cyst which is lined by mature tissue resembling the epidermis and the epidermal appendages. It occurs in the ovary, testis, and extragonadal sites including central nervous system and skin.","definition_xrefs":["NCIT:C9011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystic teratoma","termid":"MONDO:0002379"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermoid cyst","secondary_identifiers":["MEDGEN:41504","ICDO:9084/0","UMLS:C0011649","icd11.foundation:1622534741","MESH:D003884","DOID:2658","SCTID:441459009"],"synonyms":[{"name":"benign cystic teratoma","type":"exact"},{"name":"cystic dermoid choristoma","type":"exact"},{"name":"dermoid","type":"exact"},{"name":"dermoid choristoma","type":"exact"},{"name":"dermoid cyst","type":"exact"},{"name":"dermoid cyst, benign","type":"exact"},{"name":"dermoid tumor","type":"exact"},{"name":"dermoid tumour","type":"exact"},{"name":"mature cystic teratoma","type":"exact"},{"name":"subcutaneous cystic teratoma","type":"exact"},{"name":"teratoma, benign","type":"related"},{"name":"teratoma, benign (morphologic abnormality)","type":"related"}],"termid":"MONDO:0002378","xrefs":{"Monarch":{"xref_id":"0002378"}}}


id: PBO:0076739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-complex 11 like 1","termid":"PBO:0076739"}


id: GO:1904408
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to melatonin.","definition_xrefs":["PMID:10379923","GOC:mr","GO_REF:0000067","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"melatonin binding","termid":"GO:1904408"}


id: MONDO:0012953
data:
  {"annotated_genes":["SJAG_02818"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86823],"is_not":false,"summary":null,"term":"MONDO:0012953"}]},"cv_name":"mondo","definition":"Any colorectal cancer in which the cause of the disease is a mutation in the POLD1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02818":null},"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer, susceptibility to, 10","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C2675481","MEDGEN:436445","OMIM:612591"],"synonyms":[{"name":"CRCS10","type":"related"},{"name":"POLD1 colorectal cancer","type":"exact"},{"name":"colorectal cancer caused by mutation in POLD1","type":"exact"},{"name":"colorectal cancer, susceptibility to, 10","type":"exact"},{"name":"colorectal cancer, susceptibility to, on chromosome 19Q","type":"related"},{"name":"colorectal cancer, susceptibility to, type 10","type":"exact"},{"name":"susceptibility to colorectal cancer 10","type":"related"}],"termid":"MONDO:0012953","terms_by_termid":{"MONDO:0012953":null},"xrefs":{"Monarch":{"xref_id":"0012953"}}}


id: GO:0016821
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrolase activity, acting on acid anhydrides, involved in cellular and subcellular movement (obsolete GO:0016821)","synonyms":[{"name":"hydrolase activity, acting on acid anhydrides, involved in cellular and subcellular movement","type":"exact"}],"termid":"GO:0016821"}


id: GO:0102630
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3',4',5,7-pentahydroxy-8-methoxyflavon-3-olate + S-adenosyl-L-methionine = gossypetin 3',8-dimethyl ether + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gossypetin 8-methyl ester 3'-O-methyltransferase activity (obsolete GO:0102630)","termid":"GO:0102630"}


id: PBO:0085752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase; related to and functionally redundant with Elm1p and Sak1p for the phosphorylation and activation of Snf1p; functionally orthologous to LKB1, a mammalian kinase associated with Peutz-Jeghers cancer-susceptibility syndrome; TOS3 has a paralog, SAK1, that arose from the whole genome duplication","termid":"PBO:0085752"}


id: GO:1901751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving leukotriene A4.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"leukotriene metabolic process","termid":"GO:0006691"},{"relation_name":"is_a","term_name":"epoxide metabolic process","termid":"GO:0097176"},{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"leukotriene A4 metabolic process","synonyms":[{"name":"leukotriene A4 metabolism","type":"exact"}],"termid":"GO:1901751"}


id: PBO:0017747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMPACT homolog, cytoplasmic translational regulator Yih1 (predicted)","termid":"PBO:0017747"}


id: GO:1900616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of emericellamide A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"emericellamide catabolic process","termid":"GO:1900556"},{"relation_name":"is_a","term_name":"emericellamide A metabolic process","termid":"GO:1900615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"emericellamide A catabolic process","synonyms":[{"name":"emericellamide A breakdown","type":"exact"},{"name":"emericellamide A catabolism","type":"exact"},{"name":"emericellamide A degradation","type":"exact"}],"termid":"GO:1900616"}


id: MONDO:0037740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A metastasizing mesenchymal, non-meningothelial neoplasm that arises from the central nervous system.","definition_xrefs":["NCIT:C6758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system cancer","termid":"MONDO:0002714"},{"relation_name":"is_a","term_name":"central nervous system mesenchymal non-meningothelial tumor","termid":"MONDO:0003244"},{"relation_name":"is_a","term_name":"malignant soft tissue neoplasm","termid":"MONDO:0024637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant central nervous system mesenchymal, non-meningothelial neoplasm","secondary_identifiers":["MEDGEN:233147","UMLS:C1334571"],"synonyms":[{"name":"central nervous system mesenchymal non-meningothelial tumor, malignant","type":"exact"},{"name":"malignant CNS soft tissue neoplasm","type":"exact"},{"name":"malignant CNS soft tissue tumor","type":"exact"},{"name":"malignant CNS soft tissue tumour","type":"exact"},{"name":"malignant central nervous system mesenchymal non-meningothelial tumor","type":"exact"},{"name":"malignant central nervous system mesenchymal non-meningothelial tumour","type":"exact"},{"name":"malignant central nervous system mesenchymal, non-meningothelial neoplasm","type":"exact"},{"name":"malignant central nervous system mesenchymal, non-meningothelial tumor","type":"exact"},{"name":"malignant central nervous system mesenchymal, non-meningothelial tumour","type":"exact"},{"name":"malignant central nervous system soft tissue neoplasm","type":"exact"},{"name":"malignant central nervous system soft tissue tumor","type":"exact"},{"name":"malignant central nervous system soft tissue tumour","type":"exact"},{"name":"malignant soft tissue neoplasm of CNS","type":"exact"},{"name":"malignant soft tissue neoplasm of central nervous system","type":"exact"},{"name":"malignant soft tissue neoplasm of the CNS","type":"exact"},{"name":"malignant soft tissue neoplasm of the central nervous system","type":"exact"},{"name":"malignant soft tissue tumor of CNS","type":"exact"},{"name":"malignant soft tissue tumor of central nervous system","type":"exact"},{"name":"malignant soft tissue tumor of the CNS","type":"exact"},{"name":"malignant soft tissue tumor of the central nervous system","type":"exact"},{"name":"malignant soft tissue tumour of CNS","type":"exact"},{"name":"malignant soft tissue tumour of central nervous system","type":"exact"},{"name":"malignant soft tissue tumour of the CNS","type":"exact"},{"name":"malignant soft tissue tumour of the central nervous system","type":"exact"},{"name":"soft tissue cancer of central nervous system","type":"exact"},{"name":"soft tissue cancer of the central nervous system","type":"exact"}],"termid":"MONDO:0037740","xrefs":{"Monarch":{"xref_id":"0037740"}}}


id: MONDO:0022293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects the blood vessels of the penis. Representative examples include atherosclerosis, venous leak, and hemangioma.","definition_xrefs":["NCIT:C35218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"penile disorder","termid":"MONDO:0002036"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vascular disorder of penis","secondary_identifiers":["SCTID:198029003","MEDGEN:102349","UMLS:C0156307","ICD9:607.82"],"synonyms":[{"name":"Penile Vascular Disorder","type":"related"},{"name":"Penile vascular disorder","type":"related"},{"name":"Penis vascular disorder","type":"related"},{"name":"Vascular disorder of penis","type":"related"},{"name":"penile vascular disorder","type":"exact"}],"termid":"MONDO:0022293","xrefs":{"Monarch":{"xref_id":"0022293"}}}


id: PBO:0042880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 210","termid":"PBO:0042880"}


id: GO:0021531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroepithelial cells in the ventral neural tube acquire specialized structural and/or functional features of radial glial cells. Radial cell precursors differentiate into both neuronal cell types and mature radial glial cells. Mature radial glial cells regulate the axon growth and pathfinding processes that occur during white matter patterning of the developing spinal cord. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid","PMID:16185248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in spinal cord","termid":"GO:0021515"},{"relation_name":"is_a","term_name":"radial glial cell differentiation","termid":"GO:0060019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal cord radial glial cell differentiation","synonyms":[{"name":"radial glial cell differentiation in spinal cord","type":"exact"}],"termid":"GO:0021531"}


id: PBO:0062612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily U member 1 pseudogene","termid":"PBO:0062612"}


id: MONDO:1011215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Coloboma that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coloboma, non-human animal","termid":"MONDO:1010319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coloboma, domestic cat","secondary_identifiers":["OMIA:000219-9685"],"termid":"MONDO:1011215","xrefs":{"Monarch":{"xref_id":"1011215"}}}


id: PBO:0040380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5PO pseudogene 1","termid":"PBO:0040380"}


id: PBO:0060892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuraminidase 1","termid":"PBO:0060892"}


id: FYPO:0004946
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to one or more potassium ionophores. A potassium ionophore is any compound that can carry potassium ions through membranes of cells or organelles.","definition_xrefs":["PMID:25483891","CHEBI:24869","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002683","FYPO:0000139","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to potassium ionophore","synonyms":[{"name":"hypersensitive to potassium ionophore","type":"exact"},{"name":"sensitive to potassium ionophore during mitotic cell cycle","type":"related"},{"name":"sensitive to potassium ionophore during vegetative growth","type":"exact"}],"termid":"FYPO:0004946"}


id: PBO:0055734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMO7DN intronic transcript 1","termid":"PBO:0055734"}


id: GO:0098688
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An excitatory synapse formed by the parallel fibers of granule cells synapsing onto the dendrites of Purkinje cells.","definition_xrefs":["PMID:16623829","PMID:3209740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"excitatory synapse","termid":"GO:0060076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"parallel fiber to Purkinje cell synapse","termid":"GO:0098688"}


id: GO:1990072
data:
  {"annotated_genes":["SJAG_02655","SJAG_03467","SJAG_01415","SJAG_02525","SJAG_04837","SJAG_00820","SJAG_04021","SJAG_00850"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88139,96800,98607,102029,103239,104385,104455,109318],"is_not":false,"summary":null,"term":"GO:1990072"}]},"cv_name":"cellular_component","definition":"A complex that functions in anterograde transport at the Golgi and also regulates autophagy. In yeast it includes at least the following subunits: Bet3 (as homodimer), Bet5, Trs20, Trs23, Trs31, Trs33, Trs85. TRAPPIII may include further, as yet undescribed, proteins.","definition_xrefs":["PMID:20375281","PMID:22669257","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TRAPP complex","termid":"GO:0030008"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00820":null,"SJAG_00850":null,"SJAG_01415":null,"SJAG_02525":null,"SJAG_02655":null,"SJAG_03467":null,"SJAG_04021":null,"SJAG_04837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005794","GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"TRAPPIII protein complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990072","terms_by_termid":{"GO:1990072":null}}


id: MONDO:0024189
data:
  {"annotated_genes":["SJAG_05008","SJAG_00243"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000012"},{"annotations":[85817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030375"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00243":null,"SJAG_05008":null},"genotype_count":0,"is_obsolete":false,"name":"neurologic, endocrine, and pancreatic disease, multisystem, infantile-onset","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:616263"],"termid":"MONDO:0024189","terms_by_termid":{"MONDO:0030375":null,"MONDO:8000012":null},"xrefs":{"Monarch":{"xref_id":"0024189"}}}


id: GO:0045736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cyclin-dependent protein serine/threonine kinase activity.","definition_xrefs":["GOC:go_curators","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cyclin-dependent protein serine/threonine kinase activity","termid":"GO:0000079"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle","termid":"GO:0045786"},{"relation_name":"is_a","term_name":"negative regulation of protein serine/threonine kinase activity","termid":"GO:0071901"},{"relation_name":"is_a","term_name":"negative regulation of cyclin-dependent protein kinase activity","termid":"GO:1904030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of cyclin-dependent protein serine/threonine kinase activity","termid":"GO:0045736"}


id: MONDO:0009377
data:
  {"annotated_genes":["SJAG_00695","SJAG_00636"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84541,84542],"is_not":false,"summary":null,"term":"MONDO:0009377"}]},"cv_name":"mondo","definition":"N-acetylglutamate synthase (NAGS) deficiency is a urea cycle disorder leading to hyperammonaemia.","definition_xrefs":["Orphanet:927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urea cycle disorder or inherited hyperammonemia","termid":"MONDO:0800153"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00636":null,"SJAG_00695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"hyperammonemia due to N-acetylglutamate synthase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:237310","NANDO:2201084","DOID:0112258","MESH:C536109","GARD:7158","SCTID:57119000","UMLS:C0268543","NANDO:1200808","NANDO:2200477","NCIT:C129307","MEDGEN:120649"],"synonyms":[{"name":"N-acetyl glutamate synthetase deficiency","type":"related"},{"name":"N-acetylglutamate synthase deficiency","type":"related"},{"name":"N-acetylglutamate synthetase deficiency","type":"related"},{"name":"NAG synthetase deficiency","type":"related"},{"name":"NAGS deficiency","type":"exact"},{"name":"NAGSD","type":"related"},{"name":"Nags deficiency","type":"related"},{"name":"hyperammonemia due to N-acetylglutamate synthase deficiency","type":"exact"},{"name":"hyperammonemia due to N-acetylglutamate synthetase deficiency","type":"related"}],"termid":"MONDO:0009377","terms_by_termid":{"MONDO:0009377":null},"xrefs":{"Monarch":{"xref_id":"0009377"}}}


id: PBO:0049977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIGD2A pseudogene 2","termid":"PBO:0049977"}


id: GO:1990238
data:
  {"annotated_genes":["SJAG_05237"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100673],"is_not":false,"summary":null,"term":"GO:1990238"},{"annotations":[100674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106332"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within a double-stranded DNA molecule by creating internal breaks.","definition_xrefs":["PMID:22885404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0140097","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"double-stranded DNA endonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"double-stranded DNA endodeoxyribonuclease activity","type":"exact"},{"name":"dsDNA-specific endodeoxyribonuclease activity","type":"related"}],"termid":"GO:1990238","terms_by_termid":{"GO:0106332":null,"GO:1990238":null}}


id: GO:0010581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An process which modulate the frequency, rate or extent of starch biosynthesis, the chemical reactions and pathways resulting in the formation of starch.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucan biosynthetic process","termid":"GO:0010962"},{"relation_name":"is_a","term_name":"regulation of starch metabolic process","termid":"GO:2000904"},{"relation_name":"regulates","term_name":"starch biosynthetic process","termid":"GO:0019252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of starch biosynthetic process","termid":"GO:0010581"}


id: GO:0008337
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A class of cell adhesion molecules that bind to carbohydrate via a lectin-like domain; integral membrane glycoproteins.","definition_xrefs":["ISBN:0124325653"],"gene_count":0,"genotype_count":0,"name":"obsolete selectin (obsolete GO:0008337)","synonyms":[{"name":"selectin","type":"exact"}],"termid":"GO:0008337"}


id: MONDO:0004575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition produced by a deficiency of choline in animals. Choline is known as a lipotropic agent because it has been shown to promote the transport of excess fat from the liver under certain conditions in laboratory animals. Combined deficiency of choline (included in the B vitamin complex) and all other methyl group donors causes liver cirrhosis in some animals. Unlike compounds normally considered as vitamins, choline does not serve as a cofactor in enzymatic reactions. (From Saunders Dictionary & Encyclopedia of Laboratory Medicine and Technology, 1984)","definition_xrefs":["MESH:D002796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nutritional deficiency disease","termid":"MONDO:0006873"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline deficiency disease","secondary_identifiers":["DOID:8456","UMLS:C0008412","SCTID:238113006","MEDGEN:930","ICD9:266.2"],"synonyms":[{"name":"choline deficiency","type":"exact"}],"termid":"MONDO:0004575","xrefs":{"Monarch":{"xref_id":"0004575"}}}


id: MONDO:0006415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete small intestinal adenocarcinoma (obsolete MONDO:0006415)","termid":"MONDO:0006415","xrefs":{"Monarch":{"xref_id":"0006415"}}}


id: GO:0036131
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: prostaglandin D2 + H+ + NADPH = 11-epi-prostaglandin F2alpha + NADP+.","definition_xrefs":["PMID:1504718","RHEA:45316","PMID:3862115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"prostaglandin D2 11-ketoreductase activity","secondary_identifiers":["Reactome:R-HSA-2161614","KEGG_REACTION:R02799"],"synonyms":[{"name":"PGD2 11-ketoreductase","type":"exact"},{"name":"prostaglandin 11-keto reductase","type":"exact"}],"termid":"GO:0036131"}


id: MONDO:0007094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amelogenesis imperfecta in which the cause of the disease is a mutation in the LAMB3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta type 1","termid":"MONDO:0015047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta type 1A","secondary_identifiers":["OMIM:104530","MESH:C538240","UMLS:C4011403","MEDGEN:859840","DOID:0110054","GARD:15038"],"synonyms":[{"name":"AI1A","type":"exact"},{"name":"LAMB3 amelogenesis imperfecta","type":"exact"},{"name":"amelogenesis imperfecta caused by mutation in LAMB3","type":"exact"},{"name":"amelogenesis imperfecta hypoplastic type IA","type":"exact"},{"name":"amelogenesis imperfecta local hypoplastic","type":"related"},{"name":"amelogenesis imperfecta type IA","type":"exact"},{"name":"amelogenesis imperfecta, hypoplastic type 1A","type":"related"},{"name":"amelogenesis imperfecta, type 1A","type":"related"},{"name":"amelogenesis imperfecta, type IA","type":"related"},{"name":"local hypoplastic amelogenesis imperfecta","type":"related"}],"termid":"MONDO:0007094","xrefs":{"Monarch":{"xref_id":"0007094"}}}


id: MONDO:0002899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroblastoma in which the differentiating neuroblasts constitute more than five-percent of the tumor cells.","definition_xrefs":["NCIT:C42048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroblastoma","termid":"MONDO:0005072"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"differentiating neuroblastoma","secondary_identifiers":["UMLS:C1511934","MEDGEN:268734","DOID:4160"],"synonyms":[{"name":"differentiating neuroblastoma","type":"exact"}],"termid":"MONDO:0002899","xrefs":{"Monarch":{"xref_id":"0002899"}}}


id: MONDO:0017903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic variant of mendelian susceptibility to mycobacterial diseases characterized by a partial deficiency in IFN-gammaR2, leading to impaired response to IFN-gamma and, consequently, to recurrent, moderately severe infections with bacillus Calmette-Guerin (BCG) and other environmental mycobacteria (EM).","definition_xrefs":["Orphanet:319589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to mycobacterial diseases","termid":"MONDO:0019146"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal dominant mendelian susceptibility to mycobacterial diseases due to partial IFNgammaR2 deficiency","secondary_identifiers":["UMLS:C4510875","MEDGEN:1371829"],"synonyms":[{"name":"IFNGR2 autosomal dominant mendelian susceptibility to mycobacterial diseases due to a partial deficiency","type":"exact"},{"name":"autosomal dominant MSMD due to partial IFNgammaR2 deficiency","type":"exact"},{"name":"autosomal dominant MSMD due to partial interferon gamma receptor 2 deficiency","type":"exact"},{"name":"autosomal dominant mendelian susceptibility to mycobacterial diseases due to a partial deficiency caused by mutation in IFNGR2","type":"exact"},{"name":"autosomal dominant mendelian susceptibility to mycobacterial diseases due to partial interferon gamma receptor 2 deficiency","type":"exact"}],"termid":"MONDO:0017903","xrefs":{"Monarch":{"xref_id":"0017903"}}}


id: PBO:0034193
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ubiquitously_expressed_in","termid":"PBO:0034193"}


id: MONDO:0022694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral calcifications opalescent teeth phosphaturia","termid":"MONDO:0022694","xrefs":{"Monarch":{"xref_id":"0022694"}}}


id: PBO:0113035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell-wall L-asparaginase II involved in asparagine catabolism; expression induced during nitrogen starvation; ORF contains a short non-coding RNA that enhances expression of full-length gene; likely arose in via horizontal gene transfer from wine yeast Wickerhamomyces anomalus or close relative; enzyme preparation shows antitumor activity; reference strain S288C has four copies of ASP3; ASP3-1 has paralog ASP3-3 that arose from a segmental duplication","termid":"PBO:0113035"}


id: MONDO:0012662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Usher syndrome in which the cause of the disease is a mutation in the WHRN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Usher syndrome type 2","termid":"MONDO:0016484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Usher syndrome type 2D","secondary_identifiers":["DOID:0110840","OMIM:611383","GARD:15514","MEDGEN:292821","ICD10CM:H35.5","UMLS:C1568249"],"synonyms":[{"name":"USH2D","type":"exact"},{"name":"USHER syndrome, type IID","type":"related"},{"name":"Usher syndrome caused by mutation in WHRN","type":"exact"},{"name":"Usher syndrome type 2D","type":"exact"},{"name":"Usher syndrome type IID","type":"exact"},{"name":"Usher syndrome, type 2D","type":"related"},{"name":"WHRN Usher syndrome","type":"exact"}],"termid":"MONDO:0012662","xrefs":{"Monarch":{"xref_id":"0012662"}}}


id: PBO:0061637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 16 like 1","termid":"PBO:0061637"}


id: GO:0090095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of metanephric cap mesenchymal cell proliferation. Metanephric cap mesenchymal cell proliferation is the multiplication or reproduction of metanephric cap mesenchymal cells, resulting in the expansion of the cell population. A metanephric cap mesenchymal cell is a mesenchymal cell that has condensed with other mesenchymal cells surrounding the ureteric bud tip.","definition_xrefs":["GOC:tb","GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal cell proliferation","termid":"GO:0010464"},{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in kidney development","termid":"GO:1901722"},{"relation_name":"regulates","term_name":"metanephric cap mesenchymal cell proliferation involved in metanephros development","termid":"GO:0090094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephric cap mesenchymal cell proliferation","termid":"GO:0090095"}


id: MONDO:0027676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital anomaly of kidney and urinary tract in which the cause of the disease is a mutation in the TBX18 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of kidney and urinary tract","termid":"MONDO:0019719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"congenital anomalies of kidney and urinary tract 2","secondary_identifiers":["UMLS:C5574705","OMIM:143400","DOID:0080207","MEDGEN:1804316"],"synonyms":[{"name":"CAKUT2","type":"related"},{"name":"TBX18 congenital anomaly of kidney and urinary tract","type":"exact"},{"name":"congenital anomalies of kidney and urinary tract 2","type":"exact"},{"name":"congenital anomalies of kidney and urinary tract type 2","type":"exact"},{"name":"congenital anomaly of kidney and urinary tract caused by mutation in TBX18","type":"exact"},{"name":"hydronephrosis due to Pujo","type":"related"},{"name":"multicystic renal dysplasia, bilateral","type":"related"},{"name":"pelviureteric junction obstruction","type":"related"},{"name":"ureteropelvic junction obstruction","type":"related"}],"termid":"MONDO:0027676","xrefs":{"Monarch":{"xref_id":"0027676"}}}


id: GO:0098706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of iron ions from outside of a cell, across the cell outer membrane and into the periplasmic space.","definition_xrefs":["PMID:23192658","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron ion transmembrane transport","termid":"GO:0034755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"iron ion import across cell outer membrane","secondary_identifiers":["GO:0015683","GO:0097461"],"synonyms":[{"name":"ferric ion import into cell","type":"exact"},{"name":"ferric iron import across cell outer membrane","type":"narrow"},{"name":"ferric iron import into cell","type":"exact"},{"name":"ferric iron transmembrane transport","type":"broad"},{"name":"high affinity ferric iron transport","type":"narrow"},{"name":"high-affinity ferric iron transmembrane transport","type":"narrow"}],"termid":"GO:0098706"}


id: PBO:0044354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 41","termid":"PBO:0044354"}


id: PBO:0066560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling like 1","termid":"PBO:0066560"}


id: PATO:0000873
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000873 cataleptic (obsolete PATO:0000873)","termid":"PATO:0000873"}


id: PBO:0039797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3","termid":"PBO:0039797"}


id: GO:0140631
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of aldehyde dehydrogenase (NAD+).","definition_xrefs":["PMID:33495566"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0004857"}],"interesting_parent_ids":["GO:0004857","GO:0098772","GO:0003674","GO:0140678","GO:0030234"],"is_obsolete":false,"name":"aldehyde dehydrogenase (NAD+) inhibitor activity","termid":"GO:0140631"}


id: GO:1902748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lens fiber cell differentiation.","definition_xrefs":["GOC:mr","GOC:TermGenie","PMID:17592637","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of lens fiber cell differentiation","termid":"GO:1902746"},{"relation_name":"positively_regulates","term_name":"lens fiber cell differentiation","termid":"GO:0070306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lens fiber cell differentiation","synonyms":[{"name":"activation of lens fiber cell differentiation","type":"narrow"},{"name":"activation of lens fibre cell differentiation","type":"narrow"},{"name":"positive regulation of lens fibre cell differentiation","type":"exact"},{"name":"up regulation of lens fiber cell differentiation","type":"exact"},{"name":"up regulation of lens fibre cell differentiation","type":"exact"},{"name":"up-regulation of lens fiber cell differentiation","type":"exact"},{"name":"up-regulation of lens fibre cell differentiation","type":"exact"},{"name":"upregulation of lens fiber cell differentiation","type":"exact"},{"name":"upregulation of lens fibre cell differentiation","type":"exact"}],"termid":"GO:1902748"}


id: FYPO:0002032
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of actin cables is abnormal during mitosis. Actin cables are parallel actin filament bundles nucleated by formin, and are the most common form of actin filament bundles found in yeasts.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cable morphology","termid":"FYPO:0002031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0004803"],"is_obsolete":false,"name":"abnormal actin cable morphology during mitosis","synonyms":[{"name":"abnormal actin cable morphology during mitosis during mitotic cell cycle","type":"related"},{"name":"abnormal actin cable morphology during mitosis during vegetative growth","type":"exact"},{"name":"abnormal actin cable morphology during mitotic M phase","type":"related"},{"name":"abnormal actin cable morphology during mitotic nuclear division","type":"exact"},{"name":"abnormal formin-nucleated actin cable morphology during mitosis","type":"exact"},{"name":"disorganized actin cables during mitosis","type":"exact"}],"termid":"FYPO:0002032"}


id: GO:0043748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-succinylbenzoate + H2O = 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate.","definition_xrefs":["PMID:8335646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"O-succinylbenzoate synthase activity","secondary_identifiers":["EC:4.2.1.113","RHEA:10196"],"termid":"GO:0043748"}


id: GO:1901568
data:
  {"annotated_genes":["SJAG_04007","SJAG_03471","SJAG_03909"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[105088,112915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035336"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving fatty acid derivative.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid metabolic process","termid":"GO:0006629"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03471":null,"SJAG_03909":null,"SJAG_04007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"fatty acid derivative metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fatty acid derivative metabolism","type":"exact"}],"termid":"GO:1901568","terms_by_termid":{"GO:0035336":null,"GO:0035338":null}}


id: PBO:0088743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L26","termid":"PBO:0088743"}


id: PBO:0076439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 12","termid":"PBO:0076439"}


id: PBO:0079079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-iMet (anticodon CAT) 1-7","termid":"PBO:0079079"}


id: PBO:0078847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily C member 3","termid":"PBO:0078847"}


id: PBO:0089045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Cic1/Utp30 family","termid":"PBO:0089045"}


id: FYPO:0001044
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of acid phosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phosphatase activity","termid":"FYPO:0004302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abnormal acid phosphatase activity","termid":"FYPO:0001044"}


id: MONDO:0957248
data:
  {"annotated_genes":["SJAG_02848","SJAG_02384"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86039,86040],"is_not":false,"summary":null,"term":"MONDO:0957248"}]},"cv_name":"mondo","definition":"Any developmental and epileptic encephalopathy in which the cause of the disease is a homozygous mutation in the DNM1 gene.","definition_xrefs":["OMIM:620352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02384":null,"SJAG_02848":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 31B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1841095","UMLS:C5830459","DOID:0070376"],"synonyms":[{"name":"DNM1-encephalopathy and neurodevelopmental disorder","type":"broad"},{"name":"developmental and epileptic encephalopathy 31B, autosomal recessive","type":"exact"}],"termid":"MONDO:0957248","terms_by_termid":{"MONDO:0957248":null},"xrefs":{"Monarch":{"xref_id":"0957248"}}}


id: MONDO:0021805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acromesomelic dysplasia","termid":"MONDO:0019696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acromesomelic dysplasia, Campailla Martinelli type","secondary_identifiers":["GARD:505","MESH:C535659","MEDGEN:418955","UMLS:C2930969"],"synonyms":[{"name":"acromesomelic dysplasia Campailla Martinelli type","type":"related"},{"name":"mesomelic dwarfism Campailla-Martinelli type","type":"related"}],"termid":"MONDO:0021805","xrefs":{"Monarch":{"xref_id":"0021805"}}}


id: PBO:0049359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 17","termid":"PBO:0049359"}


id: GO:0010233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances, into, out of or within the phloem during long distance transport between source and sink tissues.","definition_xrefs":["GOC:sm","PMID:19025382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular transport","termid":"GO:0010232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"phloem transport","termid":"GO:0010233"}


id: GO:1990572
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that has RNA-directed RNA polymerase (RdRP) activity, and is composed of telomerase reverse transcriptase (TERT) and the non-coding RNA component of mitochondrial RNA processing endoribonuclease (RMRP).","definition_xrefs":["GOC:BHF_telomere","GOC:nc","GOC:bf","PMID:19701182","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-directed RNA polymerase complex","termid":"GO:0031379"},{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"TERT-RMRP complex","synonyms":[{"name":"telomerase reverse transcriptase:RMRP RNA complex","type":"exact"}],"termid":"GO:1990572"}


id: GO:0042088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response which is associated with resistance to intracellular bacteria, fungi, and protozoa, and pathological conditions such as arthritis, and which is typically orchestrated by the production of particular cytokines by T-helper 1 cells, most notably interferon-gamma, IL-2, and lymphotoxin.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 1 type immune response","synonyms":[{"name":"Th1 immune response","type":"exact"}],"termid":"GO:0042088"}


id: GO:0034301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell gives rise to an endospore, a dormant, highly resistant spore with a thick wall that forms within the mother cell. Endospores are produced by some low G+C Gram-positive bacteria in response to harsh conditions.","definition_xrefs":["GOC:ds","GOC:mah","ISBN:0470090278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endospore formation","termid":"GO:0034301"}


id: GO:0045230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the capsule, a protective structure surrounding some species of bacteria and fungi.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure organization","termid":"GO:0045229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"capsule organization","synonyms":[{"name":"capsule organisation","type":"exact"},{"name":"capsule organization and biogenesis","type":"related"}],"termid":"GO:0045230"}


id: PBO:0084519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of DUP240 gene family but contains no transmembrane domains; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern","termid":"PBO:0084519"}


id: GO:0032136
data:
  {"annotated_genes":["SJAG_00634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97673],"is_not":false,"summary":null,"term":"GO:0032136"}]},"cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing an A/C mispair.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatched DNA binding","termid":"GO:0030983"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"adenine/cytosine mispair binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"A/C mispair binding","type":"exact"},{"name":"C/A mispair binding","type":"exact"},{"name":"cytosine/adenine mispair binding","type":"related"}],"termid":"GO:0032136","terms_by_termid":{"GO:0032136":null}}


id: GO:1904097
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of acid phosphatase activity.","definition_xrefs":["PMID:8132635","GOC:TermGenie","GOC:bhm","GO_REF:0000088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase complex","termid":"GO:1903293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"acid phosphatase complex","termid":"GO:1904097"}


id: PBO:0058988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLLT10 pseudogene 2","termid":"PBO:0058988"}


id: GO:0048652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which individuals that have the potential to develop any of several possible distinct developmental paths have their individual developmental fates determined in response to genetic cues.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyphenic determination","termid":"GO:0048647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polyphenic determination, influence by genetic factors","termid":"GO:0048652"}


id: PBO:0047210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 221 member A","termid":"PBO:0047210"}


id: GO:0032998
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of an Fc-epsilon RI alpha chain and an Fc-epsilon RI gamma chain dimer with or without an Fc-episilon RI beta chain and additional signaling components. The complex functions primarily as an activating receptor for IgE.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fc receptor complex","termid":"GO:0032997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"Fc-epsilon receptor I complex","synonyms":[{"name":"FceRI complex","type":"exact"},{"name":"IgE receptor complex","type":"broad"},{"name":"immunoglobulin E receptor complex","type":"broad"}],"termid":"GO:0032998"}


id: PBO:0000205
data:
  {"annotation_feature_type":"gene","cv_name":"m_f_g","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleocytoplasmic shuttling protein","termid":"PBO:0000205"}


id: PR:O13979
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug105 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 105 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25H1.04","synonyms":[{"name":"Spom972h-mug105","type":"exact"}],"termid":"PR:O13979"}


id: PBO:0054095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1448","termid":"PBO:0054095"}


id: PATO:0000255
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000255 taste_acuity (obsolete PATO:0000255)","termid":"PATO:0000255"}


id: GO:0141177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont mitigates the effects of recognition by a host innate immune effector. Effectors have a direct activity against a symbiont and include complement, antimicrobial peptides, and bacterial restriction enzymes. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:19208801","PMID:33330873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated evasion of host innate immune response","termid":"GO:0141043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated evasion of recognition by host innate immune effector","synonyms":[{"name":"evasion of symbiont recognition by host innate immune effector","type":"exact"}],"termid":"GO:0141177"}


id: PBO:0050996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFT122 pseudogene 3","termid":"PBO:0050996"}


id: GO:0002048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the siderochrome pyoverdine.","definition_xrefs":["PMID:15317763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore metabolic process","termid":"GO:0009237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"pyoverdine metabolic process","synonyms":[{"name":"pyoverdine metabolism","type":"exact"}],"termid":"GO:0002048"}


id: GO:0045137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the primary sexual characteristics over time, from their formation to the mature structures. The primary sexual characteristics are the testes in males and the ovaries in females and they develop in response to sex hormone secretion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"},{"relation_name":"part_of","term_name":"sex differentiation","termid":"GO:0007548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"development of primary sexual characteristics","termid":"GO:0045137"}


id: PBO:0005096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YTH family RNA binding protein Mmi1","termid":"PBO:0005096"}


id: SO:1000072
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence_variant_effect that changes the splice donor sequence.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000072 sequence_variant_affecting_splice_donor (obsolete SO:1000072)","synonyms":[{"name":"mutation affecting splice donor","type":"related"},{"name":"sequence variant affecting splice donor","type":"related"},{"name":"splice donor mutation","type":"exact"}],"termid":"SO:1000072"}


id: PBO:0062167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 8 pseudogene","termid":"PBO:0062167"}


id: SO:0001708
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 27th residue (a lysine), from the start of the H3 histone protein is mono-methylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"H3K27_methylation_site","termid":"SO:0001732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K27_monomethylation_site","synonyms":[{"name":"H2K27 mono-methylation site","type":"exact"},{"name":"H2K27Me1","type":"related"}],"termid":"SO:0001708"}


id: FYPO:0007417
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which telomere clustering is normal (i.e. indistinguishable from wild type) during G0 phase. Normally, telomeres cluster at the nuclear periphery during vegetative growth or G0, but whereas telomeres form two to three clusters in vegetative cells, a single cluster forms in G0.","definition_xrefs":["PMID:31980821","GO:0120110","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal telomere localization","termid":"FYPO:0004973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal telomere clustering during G0","synonyms":[{"name":"normal telomere clustering during cell quiescence","type":"exact"},{"name":"normal telomere clustering during quiescence","type":"exact"}],"termid":"FYPO:0007417"}


id: GO:0010764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of fibroblast cell migration. Fibroblast cell migration is accomplished by extension and retraction of a pseudopodium.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fibroblast migration","termid":"GO:0010762"},{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"negatively_regulates","term_name":"fibroblast migration","termid":"GO:0010761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fibroblast migration","synonyms":[{"name":"negative regulation of fibroblast cell migration","type":"exact"}],"termid":"GO:0010764"}


id: MONDO:0971047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRC-2 complex-related overgrowth spectrum","secondary_identifiers":["Orphanet:659387"],"termid":"MONDO:0971047","xrefs":{"Monarch":{"xref_id":"0971047"}}}


id: PBO:0061718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUTM2B antisense RNA 1","termid":"PBO:0061718"}


id: GO:0097095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the frontonasal suture, between frontal and nasal bones, is generated and organized.","definition_xrefs":["PMID:12416537","GOC:pr","GOC:sl","Wikipedia:Head_and_neck_anatomy#Musculoskeletal_system","Wikipedia:Cranial_sutures"],"direct_ancestors":[{"relation_name":"is_a","term_name":"craniofacial suture morphogenesis","termid":"GO:0097094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"frontonasal suture morphogenesis","synonyms":[{"name":"nasofrontal suture morphogenesis","type":"exact"}],"termid":"GO:0097095"}


id: PBO:0074220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 44 member 4","termid":"PBO:0074220"}


id: GO:0003844
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxyl group in a similar glucan chain.","definition_xrefs":["EC:2.4.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"1,4-alpha-glucan branching enzyme activity","secondary_identifiers":["Reactome:R-HSA-3322005","Reactome:R-HSA-3322016","Reactome:R-HSA-3322057","Reactome:R-HSA-3878762","MetaCyc:GLYCOGEN-BRANCH-RXN"],"synonyms":[{"name":"1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-alpha-D-(1,4-alpha-D-glucano)-transferase activity","type":"exact"},{"name":"1,4-glucan-6-(1,4-glucano)-transferase activity","type":"exact"},{"name":"Q-enzyme","type":"related"},{"name":"alpha-1,4-glucan:alpha-1,4-glucan-6-glycosyltransferase activity","type":"related"},{"name":"alpha-glucan-branching glycosyltransferase activity","type":"related"},{"name":"amylo-(1,4 to 1,6)transglucosidase activity","type":"related"},{"name":"amylo-(1,4->1,6)-transglycosylase activity","type":"related"},{"name":"amylose isomerase activity","type":"related"},{"name":"branching enzyme activity","type":"related"},{"name":"branching glycosyltransferase activity","type":"related"},{"name":"enzymatic branching factor","type":"related"},{"name":"enzyme Q","type":"related"},{"name":"glucosan transglycosylase activity","type":"related"},{"name":"glycogen branching enzyme activity","type":"related"},{"name":"plant branching enzyme","type":"related"},{"name":"starch branching enzyme","type":"related"}],"termid":"GO:0003844"}


id: FYPO:0001806
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which guanine import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal guanine import","synonyms":[{"name":"normal guanine import across plasma membrane","type":"exact"},{"name":"normal guanine import during mitotic cell cycle","type":"related"},{"name":"normal guanine import during vegetative growth","type":"exact"},{"name":"normal guanine import into cell","type":"exact"},{"name":"normal guanine uptake","type":"exact"}],"termid":"FYPO:0001806"}


id: MONDO:0012789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dystonia 16 (DYT16) is a very rare and newly discovered movement disorder which is characterized by early-onset progressive limb dystonia, laryngeal and oromandibular dystonia, and parkinsonism.","definition_xrefs":["Orphanet:210571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multifocal dystonia","termid":"MONDO:0000478"},{"relation_name":"is_a","term_name":"combined dystonia","termid":"MONDO:0020065"},{"relation_name":"is_a","term_name":"parkinsonian disorder","termid":"MONDO:0021095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"dystonia 16","secondary_identifiers":["NCIT:C168729","UMLS:C2677567","icd11.foundation:548945828","MESH:C567430","NANDO:1200529","MEDGEN:436979","GARD:10539","DOID:0090048","SCTID:722435003","OMIM:612067"],"synonyms":[{"name":"DYT-PRKRA","type":"exact"},{"name":"DYT16","type":"exact"},{"name":"PRKRA dystonic disorder","type":"exact"},{"name":"Young-onset dystonia-(parkinsonism)","type":"related"},{"name":"dystonia 16","type":"exact"},{"name":"dystonia type 16","type":"exact"},{"name":"dystonic disorder caused by mutation in PRKRA","type":"exact"},{"name":"early-onset dystonia parkinsonism","type":"exact"}],"termid":"MONDO:0012789","xrefs":{"Monarch":{"xref_id":"0012789"}}}


id: PBO:0073347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 8 pseudogene 1","termid":"PBO:0073347"}


id: MONDO:0015631
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 2N von Willebrand disease (type 2N VWD) is a subtype of type 2 VWD characterized by a bleeding disorder associated with a marked decrease in the affinity of the Willebrand factor (von Willebrand factor; VWF) for factor VIII (FVIII).","definition_xrefs":["Orphanet:166093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"von Willebrand disease 2","termid":"MONDO:0013304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"von Willebrand disease type 2N","secondary_identifiers":["SCTID:359732009","icd11.foundation:1091176565","MEDGEN:266187","UMLS:C1282975","GARD:17024","NCIT:C131689"],"synonyms":[{"name":"von Willebrand disease Normandy variant","type":"exact"},{"name":"von Willebrand disease, type 2N","type":"exact"}],"termid":"MONDO:0015631","xrefs":{"Monarch":{"xref_id":"0015631"}}}


id: GO:0021516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the dorsal region of the spinal cord over time, from its formation to the mature structure. The dorsal region of the mature spinal cord contains neurons that process and relay sensory input.","definition_xrefs":["GOC:dgh","GOC:cls","GOC:dph","PMID:11179871","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"spinal cord development","termid":"GO:0021510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal spinal cord development","termid":"GO:0021516"}


id: PBO:0073125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC11 homolog C, signal peptidase complex subunit","termid":"PBO:0073125"}


id: PBO:0004860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribokinase (predicted)","termid":"PBO:0004860"}


id: PBO:0080548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 7","termid":"PBO:0080548"}


id: GO:0045765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of angiogenesis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of vasculature development","termid":"GO:1901342"},{"relation_name":"regulates","term_name":"angiogenesis","termid":"GO:0001525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of angiogenesis","termid":"GO:0045765"}


id: PBO:0058202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4495","termid":"PBO:0058202"}


id: GO:0019749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances along cytoskeletal elements, such as microfilaments or microtubules, from a nurse cell to an oocyte.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton-dependent intracellular transport","termid":"GO:0030705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"cytoskeleton-dependent cytoplasmic transport, nurse cell to oocyte","termid":"GO:0019749"}


id: GO:0061694
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A catalytic protein complex that is capable of alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity.","definition_xrefs":["PMID:22089136","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase complex","termid":"GO:0061694"}


id: FYPO:0004237
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin at centromere outer repeat regions of a chromosome is decreased.","definition_xrefs":["PomBase:mah","PMID:20299449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to heterochromatin during vegetative growth","termid":"FYPO:0001131"},{"relation_name":"is_a","term_name":"increased protein localization to chromatin at centromere outer repeat","termid":"FYPO:0006682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to heterochromatin at centromere outer repeat","synonyms":[{"name":"increased protein localisation to heterochromatin at centromere otr","type":"exact"},{"name":"increased protein localisation to heterochromatin at centromere outer repeat","type":"exact"},{"name":"increased protein localisation to heterochromatin at centromeric outer repeat region","type":"exact"},{"name":"increased protein localisation to heterochromatin at pericentric region","type":"related"},{"name":"increased protein localisation to heterochromatin at pericentromeric region","type":"related"},{"name":"increased protein localization to heterochromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased protein localization to heterochromatin at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0004237"}


id: PBO:0080433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 17","termid":"PBO:0080433"}


id: MONDO:0015745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microcephaly-polymicrogyria-corpus callosum agenesis syndrome is a rare, genetic, central nervous system malformation syndrome characterized by marked prenatal-onset microcephaly, severe motor delay with hypotonia, bilateral polymicrogyria, corpus callosum agenesis, ventricular dilation, small cerebellum and early lethality.","definition_xrefs":["Orphanet:171703"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly-polymicrogyria-corpus callosum agenesis syndrome","secondary_identifiers":["MEDGEN:1653942","GARD:20125","UMLS:C4750772"],"termid":"MONDO:0015745","xrefs":{"Monarch":{"xref_id":"0015745"}}}


id: GO:2000211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glutamate metabolic process.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glutamine family amino acid metabolic process","termid":"GO:0000820"},{"relation_name":"regulates","term_name":"glutamate metabolic process","termid":"GO:0006536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of glutamate metabolic process","synonyms":[{"name":"regulation of glutamate metabolism","type":"exact"},{"name":"regulation of glutamic acid metabolic process","type":"exact"},{"name":"regulation of glutamic acid metabolism","type":"exact"}],"termid":"GO:2000211"}


id: FYPO:0006895
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell tip is decreased during one or both meiotic nuclear divisions.","definition_xrefs":["PMID:30649994","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip","termid":"FYPO:0005987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to cell tip during meiosis","synonyms":[{"name":"decreased protein localisation to cell tip during meiosis","type":"exact"},{"name":"decreased protein localization to cell end during meiosis","type":"exact"},{"name":"decreased protein localization to cell tip during meiotic nuclear division","type":"exact"},{"name":"reduced protein localization to cell tip during meiosis","type":"exact"}],"termid":"FYPO:0006895"}


id: GO:0043806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-oxobutanoate + CoA = propionyl-CoA + formate.","definition_xrefs":["MetaCyc:KETOBUTFORMLY-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete keto acid formate lyase activity (obsolete GO:0043806)","synonyms":[{"name":"keto-acid formate acetyltransferase","type":"broad"},{"name":"keto-acid formate lyase activity","type":"exact"},{"name":"keto-acid formate-lyase activity","type":"exact"}],"termid":"GO:0043806"}


id: GO:0030450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the classical pathway of complement activation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of humoral immune response mediated by circulating immunoglobulin","termid":"GO:0002923"},{"relation_name":"is_a","term_name":"regulation of complement activation","termid":"GO:0030449"},{"relation_name":"regulates","term_name":"complement activation, classical pathway","termid":"GO:0006958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of complement activation, classical pathway","synonyms":[{"name":"regulation of complement cascade, classical pathway","type":"exact"}],"termid":"GO:0030450"}


id: GO:0140440
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an oleoyl (systematic name, (9Z)-octadecenoyl) group to a sulfur atom on the cysteine of a protein molecule, in the reaction: (9Z)-octadecenoyl-CoA + L-cysteinyl-[protein] = CoA + S-(9Z-octadecenoyl)-L-cysteinyl-[protein].","definition_xrefs":["PMID:22247542","RHEA:59744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-cysteine S-acyltransferase activity","termid":"GO:0019707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746","GO:0140096"],"is_obsolete":false,"name":"protein-cysteine S-oleoyltransferase activity","termid":"GO:0140440"}


id: PATO:0000234
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000234 visual (obsolete PATO:0000234)","termid":"PATO:0000234"}


id: GO:0097229
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The short tip of the sperm flagellum, adjacent to the sperm principal piece and furthest from the sperm head, which contains only the axoneme surrounded by the plasma membrane.","definition_xrefs":["GOC:sart","GOC:cjm","MP:0009837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sperm flagellum","termid":"GO:0036126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm end piece","termid":"GO:0097229"}


id: PBO:0088027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2-snRNP associated splicing factor; similar to the mammalian splicing factor SAP49; proposed to function as a U2-snRNP assembly factor along with Hsh155p and binding partner Cus1p; contains two RNA recognition motifs (RRM)","termid":"PBO:0088027"}


id: PBO:0044262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine ligand 1","termid":"PBO:0044262"}


id: MONDO:0054802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial polycythemia","termid":"MONDO:0001115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"erythrocytosis, familial, 7","secondary_identifiers":["DOID:0111631","MEDGEN:1642594","OMIM:617981","UMLS:C4693823"],"synonyms":[{"name":"ECYT7","type":"related"},{"name":"erythrocytosis 7","type":"exact"},{"name":"erythrocytosis, Alpha-globin type","type":"related"},{"name":"erythrocytosis, FAMILIAL, 7","type":"related"},{"name":"polycythemia, Alpha-globin type","type":"related"}],"termid":"MONDO:0054802","xrefs":{"Monarch":{"xref_id":"0054802"}}}


id: PBO:0063796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 24","termid":"PBO:0063796"}


id: GO:1905955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endothelial tube morphogenesis.","definition_xrefs":["GOC:BHF_miRNA","GOC:TermGenie","PMID:25961718","GOC:rph","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of endothelial tube morphogenesis","termid":"GO:1901509"},{"relation_name":"is_a","term_name":"negative regulation of morphogenesis of an epithelium","termid":"GO:1905331"},{"relation_name":"negatively_regulates","term_name":"endothelial tube morphogenesis","termid":"GO:0061154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endothelial tube morphogenesis","synonyms":[{"name":"down regulation of endothelial tube morphogenesis","type":"exact"},{"name":"down-regulation of endothelial tube morphogenesis","type":"exact"},{"name":"downregulation of endothelial tube morphogenesis","type":"exact"},{"name":"inhibition of endothelial tube morphogenesis","type":"narrow"}],"termid":"GO:1905955"}


id: MONDO:1010481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tetralogy of fallot that occurs in snow leopard.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetralogy of fallot, non-human animal","termid":"MONDO:1010021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetralogy of fallot, snow leopard","secondary_identifiers":["OMIA:000994-29064"],"termid":"MONDO:1010481","xrefs":{"Monarch":{"xref_id":"1010481"}}}


id: PBO:0087380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sterol binding protein involved in the export of acetylated sterols; role in sterol export is redundant with that of PRY1; redundant role with PRY1 and PRY3 in the export of free fatty acids; may be involved in detoxification of hydrophobic compounds; secreted glycoprotein and member of the CAP protein superfamily (cysteine-rich secretory proteins (CRISP), antigen 5, and pathogenesis related 1 proteins)","termid":"PBO:0087380"}


id: GO:0008205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ecdysone, (22R)-2-beta,3-beta,14,22,25-pentahydroxycholest-7-en-6-one, an ecdysteroid found in insects. It is the inactive prohormone of the moulting hormone ecdysterone and may have intrinsic hormonal activity at other stages of insect development.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol metabolic process","termid":"GO:0016125"},{"relation_name":"is_a","term_name":"ecdysteroid metabolic process","termid":"GO:0045455"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"ecdysone metabolic process","synonyms":[{"name":"ecdysone metabolism","type":"exact"}],"termid":"GO:0008205"}


id: FYECO:0000230
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in glucose-based medium containing much less nitrogen than standard minimal medium (such as EMM). Note that for mating assays sporulation medium may be more appropriate.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low nitrogen glucose MM","synonyms":[{"name":"low nitrogen glucose minimal medium","type":"exact"}],"termid":"FYECO:0000230"}


id: GO:0120058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of any small intestinal transit process, the migration of ingested material along the length of the small intestine.","definition_xrefs":["PMID:15890336","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of digestive system process","termid":"GO:0060456"},{"relation_name":"is_a","term_name":"regulation of small intestinal transit","termid":"GO:0120057"},{"relation_name":"positively_regulates","term_name":"small intestinal transit","termid":"GO:0120055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of small intestinal transit","synonyms":[{"name":"positive regulation of small bowel transit","type":"exact"},{"name":"positive regulation of small intestine transit","type":"exact"}],"termid":"GO:0120058"}


id: PBO:0071915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 54","termid":"PBO:0071915"}


id: PBO:0058825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8055","termid":"PBO:0058825"}


id: PBO:0003452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydropteroatesynthase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridinediphosphokinase/dihydroneopterin aldolase (predicted)","termid":"PBO:0003452"}


id: MONDO:1010559
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spina bifida that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida, non-human animal","termid":"MONDO:1010047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spina bifida, sheep","secondary_identifiers":["OMIA:000933-9940"],"termid":"MONDO:1010559","xrefs":{"Monarch":{"xref_id":"1010559"}}}


id: GO:0030136
data:
  {"annotated_genes":["SJAG_02282","SJAG_00379","SJAG_00916","SJAG_00108","SJAG_02240","SJAG_04565","SJAG_00669","SJAG_00104","SJAG_02789","SJAG_02805","SJAG_03404","SJAG_04609","SJAG_01809","SJAG_02177","SJAG_01748","SJAG_00152","SJAG_00800","SJAG_01600","SJAG_01167","SJAG_01428","SJAG_04517","SJAG_04644","SJAG_02453"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91689,98816,99831,100550,105206,105510],"is_not":false,"summary":null,"term":"GO:0030136"},{"annotations":[112273,112488,118379,100622],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[111082,107816,111141,95752],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"},{"annotations":[112397,94375],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[114374,117989],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030125"},{"annotations":[88379,93670],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030665"},{"annotations":[108282,99408],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034044"},{"annotations":[99684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030140"}]},"cv_name":"cellular_component","definition":"A vesicle with a coat formed of clathrin connected to the membrane via one of the clathrin adaptor complexes.","definition_xrefs":["GOC:mah","PMID:11252894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coated vesicle","termid":"GO:0030135"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00108":null,"SJAG_00152":null,"SJAG_00379":null,"SJAG_00669":null,"SJAG_00800":null,"SJAG_00916":null,"SJAG_01167":null,"SJAG_01428":null,"SJAG_01600":null,"SJAG_01748":null,"SJAG_01809":null,"SJAG_02177":null,"SJAG_02240":null,"SJAG_02282":null,"SJAG_02453":null,"SJAG_02789":null,"SJAG_02805":null,"SJAG_03404":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04644":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"clathrin-coated vesicle","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao148845161"],"termid":"GO:0030136","terms_by_termid":{"GO:0030121":null,"GO:0030122":null,"GO:0030125":null,"GO:0030130":null,"GO:0030136":null,"GO:0030140":null,"GO:0030665":null,"GO:0034044":null}}


id: PBO:0111689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyltransferase, CAAX box, subunit beta","termid":"PBO:0111689"}


id: GO:0052625
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-aminobenzoate + L-glutamate + ATP = N-(4-aminobenzoyl)-L-glutamate + AMP + diphosphate + H+.","definition_xrefs":["MetaCyc:RXN-10884","PMID:19189963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-(4-aminobenzoyl)-L-glutamate synthetase activity","synonyms":[{"name":"4-aminobenzoate amino acid synthetase activity","type":"broad"},{"name":"4-aminobenzoyl amino acid synthetase activity","type":"exact"},{"name":"p-aminobenzoate amino acid synthetase activity","type":"exact"},{"name":"p-aminobenzoyl amino acid synthetase activity","type":"exact"},{"name":"pABA amino acid synthetase activity","type":"exact"}],"termid":"GO:0052625"}


id: PBO:0031447
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_vegetative_growth","termid":"PBO:0031447"}


id: PBO:0063893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class Q pseudogene 1","termid":"PBO:0063893"}


id: PBO:0086571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YPR053C is not an essential gene; partially overlaps verified ORF NHP6A/YPR052C","termid":"PBO:0086571"}


id: GO:0071051
data:
  {"annotated_genes":["SJAG_01521","SJAG_04153","SJAG_03745","SJAG_03179","SJAG_04321","SJAG_01191","SJAG_00854"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91737,92560,95407,96742,101587,105960,114943],"is_not":false,"summary":null,"term":"GO:0071051"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of a snoRNA molecule linked to prior polyadenylation of the 3'-end of the precursor snoRNA.","definition_xrefs":["PMID:18951092","GOC:dgf","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sno(s)RNA 3'-end processing","termid":"GO:0031126"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_03179":null,"SJAG_03745":null,"SJAG_04153":null,"SJAG_04321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016074"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016074"],"is_obsolete":false,"name":"poly(A)-dependent snoRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"polyadenylation-dependent snoRNA 3'-end processing","type":"exact"},{"name":"sno(s)RNA polyadenylation","type":"narrow"}],"termid":"GO:0071051","terms_by_termid":{"GO:0071051":null}}


id: PBO:0028958
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_UDP-galactose_transmembrane_transport","termid":"PBO:0028958"}


id: GO:0016427
data:
  {"annotated_genes":["SJAG_04453","SJAG_00499","SJAG_02099","SJAG_00325","SJAG_01314","SJAG_01269"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105274],"is_not":false,"summary":null,"term":"GO:0016427"},{"annotations":[97343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106340"},{"annotations":[109650,106257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052735"},{"annotations":[89940,93413,93412,105275,89941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016428"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing methylcytosine.","definition_xrefs":["GOC:go-curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methyltransferase activity","termid":"GO:0008175"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00325":null,"SJAG_00499":null,"SJAG_01269":null,"SJAG_01314":null,"SJAG_02099":null,"SJAG_04453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016741","GO:0140101","GO:0140098"],"is_obsolete":false,"name":"tRNA (cytidine) methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tRNA (cytosine) methyltransferase activity","type":"exact"}],"termid":"GO:0016427","terms_by_termid":{"GO:0016427":null,"GO:0016428":null,"GO:0052735":null,"GO:0106340":null}}


id: PBO:0027876
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nucleosome_binding","termid":"PBO:0027876"}


id: PBO:0065166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein interacting with cyclin A1","termid":"PBO:0065166"}


id: PBO:0046636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 17","termid":"PBO:0046636"}


id: PBO:0090881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S9","termid":"PBO:0090881"}


id: GO:0055092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of sterol within an organism or cell.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid homeostasis","termid":"GO:0055088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sterol homeostasis","termid":"GO:0055092"}


id: PBO:0062133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily E member 2","termid":"PBO:0062133"}


id: MONDO:0023644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma arising in the lip or oral cavity. Most oral cavity carcinomas are squamous cell carcinomas of the tongue, buccal mucosa, or gums. Less frequent morphologic variants include mucoepidermoid carcinoma and adenocarcinoma. Lip carcinomas are usually basal cell or squamous cell carcinomas.","definition_xrefs":["NCIT:C9315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck carcinoma","termid":"MONDO:0002038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lip and oral cavity carcinoma","secondary_identifiers":["UMLS:C0220641","MEDGEN:67387"],"synonyms":[{"name":"lip and oral cavity cancer","type":"exact"},{"name":"lip and oral cavity carcinoma","type":"exact"},{"name":"oral cancer","type":"exact"},{"name":"oral carcinoma","type":"exact"}],"termid":"MONDO:0023644","xrefs":{"Monarch":{"xref_id":"0023644"}}}


id: FYPO:0002462
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, branched, septated, and elongated.","definition_xrefs":["PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"},{"relation_name":"is_a","term_name":"branched, elongated, septated cell","termid":"FYPO:0004594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001320","FYPO:0000004","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"inviable branched, elongated vegetative cell","secondary_identifiers":["FYPO:0002461"],"synonyms":[{"name":"inviable branched cell during vegetative growth","type":"exact"},{"name":"inviable branched vegetative cell","type":"exact"},{"name":"inviable branched vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable branched, elongated cell during vegetative growth","type":"exact"},{"name":"inviable branched, elongated vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable branched, elongated, septated cell","type":"exact"},{"name":"inviable branched, long, septated cell","type":"exact"},{"name":"inviable branched, septated cell","type":"exact"},{"name":"inviable elongated branched cell","type":"exact"},{"name":"lethal; branched, elongated vegetative cell","type":"exact"}],"termid":"FYPO:0002462"}


id: PBO:0029514
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_stubby_septated_vegetative_cell","termid":"PBO:0029514"}


id: PBO:0048930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLM2 pseudogene 1","termid":"PBO:0048930"}


id: GO:0071966
data:
  {"annotated_genes":["SJAG_02916","SJAG_01453","SJAG_04327","SJAG_01835","SJAG_03587","SJAG_00218","SJAG_04236","SJAG_03057","SJAG_02192","SJAG_04483","SJAG_04666","SJAG_00610","SJAG_01288","SJAG_04771","SJAG_01290","SJAG_02222","SJAG_02278","SJAG_00876","SJAG_05285","SJAG_01171","SJAG_05001","SJAG_00424","SJAG_03123","SJAG_03646","SJAG_04864","SJAG_04184","SJAG_01028"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88169,106182],"is_not":false,"summary":null,"term":"GO:0071966"},{"annotations":[93948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[108790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[103673,113874,117291,108562,88622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[91068,115316,105592,107264,112657,87544,108792,91079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[102143,108101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[94586,107555,101443,101444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070879"},{"annotations":[105594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051278"},{"annotations":[91904,86996],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[94422,102348,88916,91910],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving the polysaccharides which make up the fungal-type cell wall.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide metabolic process","termid":"GO:0010383"},{"relation_name":"part_of","term_name":"fungal-type cell wall organization or biogenesis","termid":"GO:0071852"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01028":null,"SJAG_01171":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01453":null,"SJAG_01835":null,"SJAG_02192":null,"SJAG_02222":null,"SJAG_02278":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03646":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04327":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04771":null,"SJAG_04864":null,"SJAG_05001":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"fungal-type cell wall polysaccharide metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071966","terms_by_termid":{"GO:0034412":null,"GO:0034413":null,"GO:0051278":null,"GO:0070600":null,"GO:0070610":null,"GO:0070879":null,"GO:0070880":null,"GO:0071966":null,"GO:0071970":null,"GO:0140748":null}}


id: SO:1001277
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The recoding stimulatory signal located downstream of the recoding site.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recoding_stimulatory_region","termid":"SO:1001268"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_recoding_site","synonyms":[{"name":"three prime recoding site","type":"exact"}],"termid":"SO:1001277"}


id: GO:0046755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral process by which enveloped viruses acquire a host-derived membrane enriched in viral proteins to form their external envelope. The process starts when nucleocapsids, assembled or in the process of being built, induce formation of a membrane curvature in the host plasma or organelle membrane and wrap up in the forming bud. The process ends when the bud is eventually pinched off by membrane scission to release the enveloped particle into the lumenal or extracellular space.","definition_xrefs":["VZ:1947","ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"virion assembly","termid":"GO:0019068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral budding","secondary_identifiers":["GO:0046744"],"synonyms":[{"name":"viral capsid envelopment","type":"related"},{"name":"virion budding","type":"narrow"},{"name":"virus budding","type":"related"}],"termid":"GO:0046755"}


id: SO:1001263
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a translational frameshift of +1.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translationally_frameshifted","termid":"SO:0000887"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plus_1_translationally_frameshifted","synonyms":[{"name":"plus 1 translationally frameshifted","type":"exact"}],"termid":"SO:1001263"}


id: MONDO:0006668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the conjunctiva caused by a variety of bacterial agents.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conjunctivitis","termid":"MONDO:0003799"},{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"},{"relation_name":"is_a","term_name":"eye infectious disorder","termid":"MONDO:0043885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"bacterial conjunctivitis","secondary_identifiers":["DOID:9700","SCTID:243321006","MESH:D003234","MedDRA:10061784","MEDGEN:3209","icd11.foundation:902481358","ICD9:372.03","EFO:1000829","NCIT:C53656","UMLS:C0009768"],"synonyms":[{"name":"Bacteria caused conjunctival disease","type":"exact"},{"name":"Bacteria conjunctival disease","type":"exact"},{"name":"purulent conjunctivitis","type":"exact"}],"termid":"MONDO:0006668","xrefs":{"Monarch":{"xref_id":"0006668"}}}


id: PBO:0064167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group IVD","termid":"PBO:0064167"}


id: GO:0032416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the activity of a sodium:hydrogen antiporter, which catalyzes the reaction: Na+(out) + H+(in) = Na+(in) + H+(out).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sodium ion transmembrane transporter activity","termid":"GO:2000650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of sodium:proton antiporter activity","synonyms":[{"name":"down regulation of sodium:hydrogen antiporter activity","type":"exact"},{"name":"down-regulation of sodium:hydrogen antiporter activity","type":"exact"},{"name":"downregulation of sodium:hydrogen antiporter activity","type":"exact"},{"name":"inhibition of sodium:hydrogen antiporter activity","type":"narrow"},{"name":"negative regulation of sodium:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0032416"}


id: PBO:0053827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1091","termid":"PBO:0053827"}


id: PBO:0054295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1686","termid":"PBO:0054295"}


id: PBO:0039989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 6 interacting protein 1 pseudogene 3","termid":"PBO:0039989"}


id: PR:Q65ZA5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC19D5.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q65ZA5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C19D5.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19D5.10c","synonyms":[{"name":"Spom972h-SPAC19D5.10c","type":"exact"}],"termid":"PR:Q65ZA5"}


id: PR:O60160
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- omh1 gene.","definition_xrefs":["UniProtKB:O60160","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside alpha-1,2-mannosyltransferase omh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C7.12c","synonyms":[{"name":"Spom972h-omh1","type":"exact"}],"termid":"PR:O60160"}


id: PBO:0085791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; associates with ribosomes and has a putative RNA binding domain; interacts with Tma20p; similar to human GRAP and human DRP1, which interacts with human Tma20p homolog MCT-1; protein abundance increases in response to DNA replication stress","termid":"PBO:0085791"}


id: GO:0000175
data:
  {"annotated_genes":["SJAG_03132","SJAG_01798","SJAG_03876","SJAG_00401","SJAG_02540","SJAG_04824","SJAG_06586","SJAG_04084","SJAG_03745","SJAG_01836","SJAG_04006","SJAG_02993","SJAG_04153","SJAG_04818","SJAG_04519","SJAG_00841","SJAG_00081","SJAG_01822","SJAG_04407","SJAG_00966","SJAG_04369"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89456,91741,95112,98444,101590,102443,103174,103913,104762,106955,107272,107980,110743,114826,115156,116101,117807],"is_not":false,"summary":null,"term":"GO:0000175"},{"annotations":[113928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008859"},{"annotations":[112416,107273,115161,116102,92891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004535"},{"annotations":[93211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990838"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of an RNA molecule.","definition_xrefs":["ISBN:0198547684","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-5' exonuclease activity","termid":"GO:0008408"},{"relation_name":"is_a","term_name":"RNA exonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016896"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00401":null,"SJAG_00841":null,"SJAG_00966":null,"SJAG_01798":null,"SJAG_01822":null,"SJAG_01836":null,"SJAG_02540":null,"SJAG_02993":null,"SJAG_03132":null,"SJAG_03745":null,"SJAG_03876":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04369":null,"SJAG_04407":null,"SJAG_04519":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_06586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0004527","GO:0016787","GO:0016788","GO:0003674","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"3'-5'-RNA exonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9682603","Reactome:R-HSA-6791222","Reactome:R-HSA-9822437","Reactome:R-HSA-9836585","Reactome:R-HSA-9836822","Reactome:R-HSA-430028","Reactome:R-HSA-6791227","Reactome:R-HSA-9694632"],"synonyms":[{"name":"3'-5' exoribonuclease activity","type":"exact"},{"name":"3'-5'-exoribonuclease activity","type":"exact"}],"termid":"GO:0000175","terms_by_termid":{"GO:0000175":null,"GO:0004535":null,"GO:0008859":null,"GO:1990838":null}}


id: GO:0008300
data:
  {"annotated_genes":["SJAG_04954"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016095"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of an isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid metabolic process","termid":"GO:0006720"},{"relation_name":"is_a","term_name":"lipid catabolic process","termid":"GO:0016042"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"isoprenoid catabolic process","references_by_uniquename":{"GO_REF:0000104":null},"secondary_identifiers":["GO:0016097"],"synonyms":[{"name":"isoprenoid breakdown","type":"exact"},{"name":"isoprenoid catabolism","type":"exact"},{"name":"isoprenoid degradation","type":"exact"},{"name":"polyisoprenoid breakdown","type":"narrow"},{"name":"polyisoprenoid catabolic process","type":"narrow"},{"name":"polyisoprenoid catabolism","type":"narrow"},{"name":"polyisoprenoid degradation","type":"narrow"},{"name":"polyterpene catabolic process","type":"narrow"},{"name":"polyterpene catabolism","type":"narrow"}],"termid":"GO:0008300","terms_by_termid":{"GO:0016095":null}}


id: MONDO:0002287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A reactive inflammatory disorder affecting the bladder. It is characterized by the development of small cysts in the bladder wall. The cysts are lined by metaplastic glandular cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic cystitis","termid":"MONDO:0006030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glandular cystitis","secondary_identifiers":["SCTID:72815004","DOID:2392","NCIT:C39860","UMLS:C0268837","ICD9:595.89","MEDGEN:82830"],"synonyms":[{"name":"cystitis glandularis","type":"related"}],"termid":"MONDO:0002287","xrefs":{"Monarch":{"xref_id":"0002287"}}}


id: GO:0015704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cyanate, NCO-, the anion of cyanic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"one-carbon compound transport","termid":"GO:0019755"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"cyanate transport","termid":"GO:0015704"}


id: PBO:0057543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 659","termid":"PBO:0057543"}


id: GO:0090671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which telomerase RNA (TERC) is transported to, or maintained in, a Cajal body.","definition_xrefs":["GOC:nc","GOC:BHF_telomere","PMID:25467444","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA localization to Cajal body","termid":"GO:0090670"},{"relation_name":"is_a","term_name":"telomerase RNA localization","termid":"GO:0090672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"telomerase RNA localization to Cajal body","termid":"GO:0090671"}


id: MONDO:0018360
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A self-limited skin rash that appears in the neonatal period and usually resolves in four to six months after birth. It is caused by placental transfer of maternal autoantibodies, usually anti-Ro antibody. In a minority of cases, it is associated with congenital heart block, hepatitis, or thrombocytopenia. The mothers of the affected babies may be asymptomatic or suffer from systemic lupus erythematosus, Sjogren's syndrome, or rheumatoid arthritis.","definition_xrefs":["NCIT:C99236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"systemic lupus erythematosus","termid":"MONDO:0007915"},{"relation_name":"is_a","term_name":"secondary neonatal autoimmune disease","termid":"MONDO:0018356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"neonatal lupus erythematosus","secondary_identifiers":["MESH:C536397","NORD:1495","MEDGEN:98372","icd11.foundation:213855225","EFO:0004537","GARD:21647","UMLS:C0409979","Orphanet:398124","SCTID:95609003"],"synonyms":[{"name":"Neonatal Lupus","type":"exact"},{"name":"congenital lupus","type":"related"},{"name":"congenital lupus erythematosus","type":"related"},{"name":"neonatal SLE","type":"related"},{"name":"neonatal lupus","type":"related"},{"name":"neonatal lupus syndrome","type":"related"},{"name":"neonatal systemic lupus erythematosus","type":"related"}],"termid":"MONDO:0018360","xrefs":{"Monarch":{"xref_id":"0018360"}}}


id: PBO:0068208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 515","termid":"PBO:0068208"}


id: GO:0008498
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The trans-bilayer migration of phospholipids accelerated by a phospholipid scramblase upon binding calcium ions.","definition_xrefs":["OMIM:604170"],"gene_count":0,"genotype_count":0,"name":"obsolete phospholipid scrambling (obsolete GO:0008498)","synonyms":[{"name":"phospholipid scrambling","type":"exact"}],"termid":"GO:0008498"}


id: MONDO:0008686
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Woolly hair is a rare congenital abnormality of the structure of the scalp hair marked by extreme kinkiness of the hair.","definition_xrefs":["Orphanet:170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hair anomaly","termid":"MONDO:0019278"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated familial wooly hair disorder","secondary_identifiers":["MEDGEN:87469","DOID:0111572","SCTID:52564001","GARD:5597","HP:0002224","MedDRA:10048017","UMLS:C0343073","MESH:C536745"],"synonyms":[{"name":"ADWH","type":"related"},{"name":"familial woolly hair (autosomal recessive)","type":"related"},{"name":"familial woolly hair syndrome","type":"exact"},{"name":"familial wooly hair (autosomal recessive)","type":"related"},{"name":"familial wooly hair syndrome","type":"exact"},{"name":"hereditary woolly hair (autosomal dominant)","type":"related"},{"name":"hereditary woolly hair syndrome","type":"exact"},{"name":"hereditary wooly hair (autosomal dominant)","type":"related"},{"name":"hereditary wooly hair syndrome","type":"exact"},{"name":"woolly hair","type":"exact"},{"name":"woolly hair syndrome","type":"related"},{"name":"woolly hair, autosomal dominant","type":"related"},{"name":"wooly hair","type":"exact"},{"name":"wooly hair syndrome","type":"related"},{"name":"wooly hair, autosomal dominant","type":"related"}],"termid":"MONDO:0008686","xrefs":{"Monarch":{"xref_id":"0008686"}}}


id: MONDO:0016852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome X disorder","termid":"MONDO:0700027"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternal uniparental disomy of chromosome X","secondary_identifiers":["UMLS:C5191049","GARD:20784","icd11.foundation:444322860","Orphanet:261524","MEDGEN:1683101"],"synonyms":[{"name":"UPD(X)pat","type":"exact"},{"name":"paternal uniparental disomy of chromosome type X","type":"exact"}],"termid":"MONDO:0016852","xrefs":{"Monarch":{"xref_id":"0016852"}}}


id: PBO:0044409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily F member 2, pseudogene","termid":"PBO:0044409"}


id: GO:0033626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of integrin activation by cell surface receptor linked signal transduction. This can occur by increased affinity of an integrin for its extracellular ligands.","definition_xrefs":["GOC:add","PMID:12213832","PMID:14754902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"is_a","term_name":"positive regulation of integrin activation","termid":"GO:0033625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0023052","GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"positive regulation of integrin activation by cell surface receptor linked signal transduction","synonyms":[{"name":"cell surface receptor linked signal transduction leading to integrin activation","type":"exact"},{"name":"cell surface receptor linked signal transduction leading to integrin complex activation","type":"exact"}],"termid":"GO:0033626"}


id: MONDO:0006391
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neoplastic polyp that arises from the stomach. It is characterized by the presence of gastric epithelial differentiation and pyloric gland-type tubular structures, which are closely packed.","definition_xrefs":["NCIT:C43526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric adenoma","termid":"MONDO:0006221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pyloric gland adenoma","secondary_identifiers":["MEDGEN:1771507","EFO:1000501","UMLS:C5421225"],"synonyms":[{"name":"pyloric gastric gland adenoma","type":"exact"},{"name":"pyloric gland adenoma","type":"exact"}],"termid":"MONDO:0006391","xrefs":{"Monarch":{"xref_id":"0006391"}}}


id: GO:0051719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + DNA containing CpN = S-adenosyl-L-homocysteine + DNA containing 5-MeCpN.","definition_xrefs":["PMID:15689527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA (cytosine-5-)-methyltransferase activity","termid":"GO:0003886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0140097","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"DNA (cytosine-5-)-methyltransferase activity, acting on CpN substrates","secondary_identifiers":["Reactome:R-HSA-5334097","Reactome:R-HSA-5334152","Reactome:R-HSA-9845308"],"termid":"GO:0051719"}


id: PBO:0028606
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_pyrithiamine","termid":"PBO:0028606"}


id: GO:0031251
data:
  {"annotated_genes":["SJAG_02808","SJAG_01910","SJAG_00966"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91417,92888,108692],"is_not":false,"summary":null,"term":"GO:0031251"}]},"cv_name":"cellular_component","definition":"A complex that possesses poly(A)-specific ribonuclease activity; catalyzes the message-specific shortening of mRNA poly(A) tails. Contains at least two subunits, known as Pan2p and Pan3p in Saccharomyces.","definition_xrefs":["PMID:9774670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exoribonuclease complex","termid":"GO:1905354"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00966":null,"SJAG_01910":null,"SJAG_02808":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"PAN complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"poly(A) nuclease complex","type":"exact"}],"termid":"GO:0031251","terms_by_termid":{"GO:0031251":null}}


id: PBO:0053217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 14","termid":"PBO:0053217"}


id: MONDO:0019991
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Immunotactoid glomerulopathy (ITG) is a very rare condition characterized by glomerular accumulation of microtubules in the mesangium and the glomerular basement membrane, that mainly presents with proteinuria, micro-hematuria, nephrotic syndrome, renal insufficiency and hematologic malignancy. ITG and non-amyloid fibrillary glomerulopathy (non-amyloid FGP) are often grouped together as pathogenetically related diseases.","definition_xrefs":["Orphanet:97567"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulonephritis","termid":"MONDO:0002462"},{"relation_name":"is_a","term_name":"immunotactoid or fibrillary glomerulopathy","termid":"MONDO:0019605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"immunotactoid glomerulopathy","secondary_identifiers":["SCTID:73305009","NCIT:C96182","UMLS:C5202806","ICD9:583.9","NCIT:C158968","GARD:12048","MEDGEN:1684714"],"synonyms":[{"name":"FGN","type":"exact"},{"name":"Immunotactoid glomerulonephritis","type":"exact"},{"name":"fibrillary glomerulonephritis","type":"exact"}],"termid":"MONDO:0019991","xrefs":{"Monarch":{"xref_id":"0019991"}}}


id: GO:0052741
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (4R)-limonene + O2 + reduced [NADPH--hemoprotein reductase] = (1R,5S)-carveol + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:18957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"},{"relation_name":"is_a","term_name":"limonene monooxygenase activity","termid":"GO:0019113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(R)-limonene 6-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R06119","EC:1.14.14.53","MetaCyc:RXN-10746"],"synonyms":[{"name":"(+)-limonene 6-monooxygenase activity","type":"related"},{"name":"(+)-limonene-6-hydroxylase activity","type":"related"},{"name":"(R)-limonene,NADPH:oxygen oxidoreductase (6-hydroxylating) activity","type":"exact"}],"termid":"GO:0052741"}


id: MONDO:0010348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"dyslexia","termid":"MONDO:0005489"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dyslexia, susceptibility to, 9","secondary_identifiers":["OMIM:300509","MEDGEN:375623","UMLS:C1845296"],"synonyms":[{"name":"DYX9","type":"exact"},{"name":"dyslexia, susceptibility to, 9","type":"exact"}],"termid":"MONDO:0010348","xrefs":{"Monarch":{"xref_id":"0010348"}}}


id: GO:0071217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an external biotic stimulus, an external stimulus caused by, or produced by living things.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external biotic stimulus","termid":"GO:0043207"},{"relation_name":"is_a","term_name":"cellular response to biotic stimulus","termid":"GO:0071216"},{"relation_name":"is_a","term_name":"cellular response to external stimulus","termid":"GO:0071496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to external biotic stimulus","termid":"GO:0071217"}


id: PBO:0016891
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"longer transcript expressed during cold shock due to altered 3'-end processing","termid":"PBO:0016891"}


id: GO:1905603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates blood-brain barrier permeability, the quality of the blood-brain barrier that allows for a controlled passage of substances (e.g. macromolecules, small molecules, ions) into and out of the brain.","definition_xrefs":["PMID:22524708","GOC:bc","GOC:TermGenie","GO_REF:0000058","PMID:30280653","GOC:als","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vascular permeability","termid":"GO:0043114"},{"relation_name":"part_of","term_name":"maintenance of blood-brain barrier","termid":"GO:0035633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of blood-brain barrier permeability","synonyms":[{"name":"regulation of BBB permeability","type":"exact"},{"name":"regulation of blood/brain barrier permeability","type":"exact"}],"termid":"GO:1905603"}


id: PBO:0028886
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_splicing","termid":"PBO:0028886"}


id: PR:Q10208
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pyruvate kinase I that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.10c","secondary_identifiers":["UniProtKB:Q10208"],"synonyms":[{"name":"PK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC4H3.10c","type":"related"},{"name":"Spom972h-pykF","type":"exact"}],"termid":"PR:Q10208"}


id: MONDO:1012805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cerebellar ataxia that occurs in dogs due to a mutation in the SCN8A gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar ataxia, dog","termid":"MONDO:1012957"},{"relation_name":"is_a","term_name":"hereditary cerebellar ataxia, non-human animal","termid":"MONDO:1012960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinocerebellar ataxia, SCN8A-related, dog","secondary_identifiers":["OMIA:002194-9615"],"synonyms":[{"name":"ataxia, spinocerebellar, SCN8A-related, dog","type":"exact"}],"termid":"MONDO:1012805","xrefs":{"Monarch":{"xref_id":"1012805"}}}


id: PBO:0034052
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_vector","termid":"PBO:0034052"}


id: GO:1904525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA amplification.","definition_xrefs":["GOC:TermGenie","PMID:26195783","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA amplification","termid":"GO:1904523"},{"relation_name":"is_a","term_name":"positive regulation of DNA biosynthetic process","termid":"GO:2000573"},{"relation_name":"positively_regulates","term_name":"DNA amplification","termid":"GO:0006277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"positive regulation of DNA amplification","synonyms":[{"name":"activation of DNA amplification","type":"narrow"},{"name":"up regulation of DNA amplification","type":"exact"},{"name":"up-regulation of DNA amplification","type":"exact"},{"name":"upregulation of DNA amplification","type":"exact"}],"termid":"GO:1904525"}


id: PBO:0069496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 763, pseudogene","termid":"PBO:0069496"}


id: PBO:0001977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chs five related protein Cfr1","termid":"PBO:0001977"}


id: PBO:0077228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane channel like 4","termid":"PBO:0077228"}


id: MONDO:0019719
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A urinary system disease characterized by structural malformations in the kidney and/or urinary tract containing vesicoureteral reflux.","definition_xrefs":["PMID:25313840","DOID:0080205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"congenital anomaly of kidney and urinary tract","secondary_identifiers":["MEDGEN:369894","GARD:19216","OMIMPS:610805","MESH:C566906","Orphanet:93545","UMLS:C1968949"],"synonyms":[{"name":"CAKUT","type":"exact"},{"name":"congenital anomalies of kidney and urinary tract","type":"exact"},{"name":"congenital anomalies of the kidney and urinary tract","type":"exact"},{"name":"congenital anomaly of kidney and urinary tract","type":"exact"},{"name":"renal or urinary tract malformation","type":"exact"}],"termid":"MONDO:0019719","xrefs":{"Monarch":{"xref_id":"0019719"}}}


id: PBO:0030517
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_brefeldin_A","termid":"PBO:0030517"}


id: GO:0021972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a pyramidal cell that is part of the corticospinal tract is directed after decussation through the spinal cord in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:dph","GOC:jid","PMID:9878731","GOC:cls","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"},{"relation_name":"part_of","term_name":"corticospinal neuron axon guidance","termid":"GO:0021966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corticospinal neuron axon guidance through spinal cord","synonyms":[{"name":"corticospinal neuron axon pathfinding through spinal cord","type":"exact"}],"termid":"GO:0021972"}


id: PBO:0040402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit G1 pseudogene 3","termid":"PBO:0040402"}


id: PBO:0077346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 87A","termid":"PBO:0077346"}


id: GO:0015861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cytidine, cytosine riboside, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside transport","termid":"GO:0015864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"cytidine transport","termid":"GO:0015861"}


id: PBO:0043613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COMM domain containing 4 pseudogene 1","termid":"PBO:0043613"}


id: PBO:0114082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, predicted GPI anchor, possible peptidase","termid":"PBO:0114082"}


id: GO:1904132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of convergent extension involved in neural plate elongation.","definition_xrefs":["GO_REF:0000058","GOC:dph","GOC:TermGenie","PMID:24892953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of convergent extension involved in gastrulation","termid":"GO:1904105"},{"relation_name":"is_a","term_name":"regulation of convergent extension involved in neural plate elongation","termid":"GO:1904130"},{"relation_name":"positively_regulates","term_name":"convergent extension involved in neural plate elongation","termid":"GO:0022007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of convergent extension involved in neural plate elongation","synonyms":[{"name":"activation of convergent extension involved in neural plate elongation","type":"narrow"},{"name":"up regulation of convergent extension involved in neural plate elongation","type":"exact"},{"name":"up-regulation of convergent extension involved in neural plate elongation","type":"exact"},{"name":"upregulation of convergent extension involved in neural plate elongation","type":"exact"}],"termid":"GO:1904132"}


id: PBO:0072666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon 4 receptor like 1","termid":"PBO:0072666"}


id: MONDO:1012497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Lundehund syndrome, non-human animal","termid":"MONDO:1011667"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lundehund syndrome, dog","secondary_identifiers":["OMIA:002031-9615"],"termid":"MONDO:1012497","xrefs":{"Monarch":{"xref_id":"1012497"}}}


id: PBO:0057062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 146a","termid":"PBO:0057062"}


id: SO:0001811
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post-translationally modified region in which residues of the protein are modified by phosphorylation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post_translationally_modified_region","termid":"SO:0001089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"phosphorylation_site","synonyms":[{"name":"phosphorylation site","type":"exact"}],"termid":"SO:0001811"}


id: GO:0033235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the addition of SUMO groups to a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein sumoylation","termid":"GO:0033233"},{"relation_name":"is_a","term_name":"positive regulation of protein modification by small protein conjugation or removal","termid":"GO:1903322"},{"relation_name":"positively_regulates","term_name":"protein sumoylation","termid":"GO:0016925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"positively_regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"positive regulation of protein sumoylation","synonyms":[{"name":"positive regulation of sumoylation","type":"exact"}],"termid":"GO:0033235"}


id: GO:0097545
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cellular anatomical entity that is part of an axoneme consisting of a doublet microtubule.","definition_xrefs":["GOC:krc","PMID:5044758","Wikipedia:Axoneme","GOC:cilia","GOC:pr","PMID:5664206"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axoneme","termid":"GO:0005930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"axonemal doublet microtubule","synonyms":[{"name":"DMT","type":"related"},{"name":"axonemal outer doublet","type":"exact"},{"name":"axoneme outer doublet","type":"exact"},{"name":"outer doublet","type":"broad"},{"name":"outer-doublet microtubules","type":"related"}],"termid":"GO:0097545"}


id: MONDO:0014975
data:
  {"annotated_genes":["SJAG_03866","SJAG_04757"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86477,86478],"is_not":false,"summary":null,"term":"MONDO:0014975"}]},"cv_name":"mondo","definition":"Any hereditary spastic paraplegia in which the cause of the disease is a mutation in the ATP13A2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03866":null,"SJAG_04757":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"autosomal recessive spastic paraplegia type 78","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17952","OMIM:617225","UMLS:C5567893","DOID:0112348","MEDGEN:1799316","Orphanet:513436"],"synonyms":[{"name":"ATP13A2 hereditary spastic paraplegia","type":"exact"},{"name":"SPG78","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in ATP13A2","type":"exact"},{"name":"spastic paraplegia 78, autosomal recessive","type":"exact"},{"name":"spastic paraplegia 78, autosomal recessive; SPG78","type":"exact"}],"termid":"MONDO:0014975","terms_by_termid":{"MONDO:0014975":null},"xrefs":{"Monarch":{"xref_id":"0014975"}}}


id: PBO:0088379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytokinetic formin Cdc12","termid":"PBO:0088379"}


id: PR:000064868
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit rpb1 CTD-phosphorylated form (Schizosaccharomyces pombe) that has been post-translationally modified to include phosphothreonine at the fourth position of one or more of the C-terminal heptad repeats (YSPTSPS).","definition_xrefs":["PRO:DAN","PMID:31276588","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rpb1/Phos(CTD-S2,S5,S7)","termid":"PR:000050494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rpb1/Phos(CTD-T4)","pombase_gene_id":"SPBC28F2.12","synonyms":[{"name":"PomBase_original_PRO_term_name: DNA-directed RNA polymerase II subunit rpb1 phosphorylated 7 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rpb1/Phos:7","type":"exact"},{"name":"T4P-Pol II (Schizosaccharomyces pombe)","type":"exact"},{"name":"rpb1/Phos(CTD-T4)","type":"exact"}],"termid":"PR:000064868"}


id: PBO:0028315
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_viability_upon_nitrogen_starvation","termid":"PBO:0028315"}


id: PBO:0077506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 223","termid":"PBO:0077506"}


id: PBO:0058260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4638","termid":"PBO:0058260"}


id: GO:0018278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The deamination of N-terminal peptidyl-threonine to form peptidyl-2-oxobutanoic acid.","definition_xrefs":["RESID:AA0129"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-threonine deamination (obsolete GO:0018278)","termid":"GO:0018278"}


id: PBO:0048830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 14","termid":"PBO:0048830"}


id: PBO:0091766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating type M-specific polypeptide Mi","termid":"PBO:0091766"}


id: PBO:0085728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the processing of pre-rRNA to mature rRNA; contains a C2/C2 zinc finger motif; srd1 mutation suppresses defects caused by the rrp1-1 mutation","termid":"PBO:0085728"}


id: PBO:0055141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2560","termid":"PBO:0055141"}


id: PBO:0067520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 663, pseudogene","termid":"PBO:0067520"}


id: GO:1901022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 4-hydroxyphenylacetate.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"4-hydroxyphenylacetate metabolic process","synonyms":[{"name":"4-hydroxyphenylacetate metabolism","type":"exact"}],"termid":"GO:1901022"}


id: MONDO:0008604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triphalangeal thumb with double phalanges","secondary_identifiers":["UMLS:C1860807","MEDGEN:395985","MESH:C566028","OMIM:190500"],"synonyms":[{"name":"triphalangeal thumb with double phalanges","type":"exact"}],"termid":"MONDO:0008604","xrefs":{"Monarch":{"xref_id":"0008604"}}}


id: PBO:0002102
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates rhp51","termid":"PBO:0002102"}


id: FYPO:0001638
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-alanine measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular alanine level","synonyms":[{"name":"normal cellular L-alanine level","type":"exact"},{"name":"normal cellular alanine level during mitotic cell cycle","type":"related"},{"name":"normal cellular alanine level during vegetative growth","type":"exact"},{"name":"normal level of alanine in cell","type":"exact"}],"termid":"FYPO:0001638"}


id: PBO:0068375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 168","termid":"PBO:0068375"}


id: PR:O14339
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1701 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L17-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.04","synonyms":[{"name":"Spom972h-rpl1701","type":"exact"}],"termid":"PR:O14339"}


id: PBO:0000598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex subunit Mot2 (predicted)","termid":"PBO:0000598"}


id: PBO:0112883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial dihydrolipoamide S-succinyltransferase, (e2 component of oxoglutarate dehydrogenase complex) Kgd2","termid":"PBO:0112883"}


id: PBO:0078392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 2-1","termid":"PBO:0078392"}


id: PBO:0045047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoamide S-acetyltransferase","termid":"PBO:0045047"}


id: PBO:0089527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphate 1-dehydrogenase Zwf1","termid":"PBO:0089527"}


id: GO:1990666
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of the serine protease PCSK9 (proprotein convertase subtilisin/kexin-9) and a low-density lipoprotein receptor (LDLR). Interaction typically occurs through the epidermal growth factor-like repeat A (EGF-A) domain of the LDLR, and complex formation promotes degradation of the LDLR through the endosome/lysosome pathway.","definition_xrefs":["GOC:nc","GOC:BHF","PMID:18250299","PMID:24440079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"PCSK9-LDLR complex","synonyms":[{"name":"PCSK9.LDLR complex","type":"exact"},{"name":"PCSK9/LDL-R complex","type":"exact"},{"name":"PCSK9:EGF-A complex","type":"related"},{"name":"PCSK9:low-density lipoprotein receptor complex","type":"exact"}],"termid":"GO:1990666"}


id: PATO:0002386
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape that inheres in the bearer by virtue of the bearer's shape that is wider at one end and narrow in the middle.","definition_xrefs":["PATOC:AD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anvil","synonyms":[{"name":"anvil shaped","type":"exact"}],"termid":"PATO:0002386"}


id: PBO:0039158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 4 pseudogene 5","termid":"PBO:0039158"}


id: PBO:0091711
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cleavage FacTor","termid":"PBO:0091711"}


id: PBO:0011507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial pyruvate transmembrane transporter subunit Mpc1","termid":"PBO:0011507"}


id: SO:0000286
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence directly repeated at both ends of a defined sequence, of the sort typically found in retroviruses.","direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"},{"relation_name":"part_of","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long_terminal_repeat","secondary_identifiers":["http://en.wikipedia.org/wiki/Long_terminal_repeat"],"synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:long_terminal_repeat","type":"exact"},{"name":"LTR","type":"exact"},{"name":"direct terminal repeat","type":"related"},{"name":"long terminal repeat","type":"exact"}],"termid":"SO:0000286"}


id: PBO:0090393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase associated PHD finger protein Cph1","termid":"PBO:0090393"}


id: PR:Q9P7L5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ornithine aminotransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine aminotransferase car2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.08c","secondary_identifiers":["UniProtKB:Q9P7L5"],"synonyms":[{"name":"Spom972h-OAT","type":"exact"},{"name":"ornithine--oxo-acid aminotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7L5"}


id: PBO:0049799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex P5","termid":"PBO:0049799"}


id: SO:0001924
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non coding RNA transcript, complementary to subtelomeric tract of TERRA transcript but devoid of the repeats.","definition_xrefs":["PMID:2139915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomeric_transcript","termid":"SO:0001927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARRET","termid":"SO:0001924"}


id: GO:0047481
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alanyl-poly(glycerolphosphate) + D-alanine + ATP = D-alanyl-alanyl-poly(glycerolphosphate) + phosphate + ADP.","definition_xrefs":["EC:6.3.2.16","MetaCyc:6.3.2.16-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"D-alanine-alanyl-poly(glycerolphosphate) ligase activity","synonyms":[{"name":"D-alanine-membrane acceptor-ligase activity","type":"related"},{"name":"D-alanine:alanyl-poly(glycerolphosphate) ligase (ADP-forming)","type":"related"},{"name":"D-alanine:membrane-acceptor ligase activity","type":"related"},{"name":"D-alanyl-alanyl-poly(glycerolphosphate) synthetase activity","type":"related"},{"name":"D-alanyl-poly(phosphoglycerol) synthetase activity","type":"related"},{"name":"D-alanylalanylpoly(phosphoglycerol) synthetase activity","type":"related"}],"termid":"GO:0047481"}


