# terms

id: MONDO:0958332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neuromuscular disease","termid":"MONDO:0100546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuromuscular disorder, congenital, with dysmorphic facies","secondary_identifiers":["OMIM:620775"],"termid":"MONDO:0958332","xrefs":{"Monarch":{"xref_id":"0958332"}}}


id: MONDO:0014490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of fatty acid and ketone body metabolism","termid":"MONDO:0019223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"ketoacidosis due to monocarboxylate transporter-1 deficiency","secondary_identifiers":["OMIM:616095","GARD:17733","MEDGEN:863623","Orphanet:438075","UMLS:C4015186"],"synonyms":[{"name":"MCT1D","type":"related"},{"name":"monocarboxylate transporter 1 deficiency","type":"related"}],"termid":"MONDO:0014490","xrefs":{"Monarch":{"xref_id":"0014490"}}}


id: PBO:0002740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atg8 deconjugator Atg4 (predicted)","termid":"PBO:0002740"}


id: PBO:0065235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 13 pseudogene 3","termid":"PBO:0065235"}


id: GO:0034902
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: endosulfan sulfate + H2O = endosulfan diol + sulfite.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete endosulfan sulfate hydrolase activity (obsolete GO:0034902)","termid":"GO:0034902"}


id: GO:0006516
data:
  {"annotated_genes":["SJAG_03032","SJAG_01858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95195,93028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097466"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a glycoprotein, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein metabolic process","termid":"GO:0009100"},{"relation_name":"is_a","term_name":"protein catabolic process","termid":"GO:0030163"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01858":null,"SJAG_03032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"glycoprotein catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glycoprotein breakdown","type":"exact"},{"name":"glycoprotein catabolism","type":"exact"},{"name":"glycoprotein degradation","type":"exact"}],"termid":"GO:0006516","terms_by_termid":{"GO:0097466":null}}


id: GO:0043844
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP + D-fructose 6-phosphate = AMP + D-fructose 1,6-bisphosphate.","definition_xrefs":["EC:2.7.1.146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"ADP-specific phosphofructokinase activity","secondary_identifiers":["RHEA:20105"],"synonyms":[{"name":"ADP-6-phosphofructokinase activity","type":"related"},{"name":"ADP-Pfk activity","type":"related"},{"name":"ADP-dependent phosphofructokinase activity","type":"related"},{"name":"ADP:D-fructose-6-phosphate 1-phosphotransferase activity","type":"related"}],"termid":"GO:0043844"}


id: GO:0018081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The synthesis of (2R,6R)-lanthionine, sn-(2S,6R)-lanthionine or (2S,3S,6R)-3-methyl-lanthionine, forming an intra-polypeptide cross-link between peptidyl-cysteine, and peptidyl-serine or peptidyl-threonine; dehydration of the serine or threonine residue to the alpha,beta-unsaturated amino acid is the first step; a bond then forms between the ethylene (ethene) group thus formed and the sulfur atom of a cysteine, with the inversion of the configuration of the alpha carbon of the serine or threonine occurring during the process.","definition_xrefs":["RESID:AA0111","RESID:AA0110","ISBN:0198547684","RESID:AA0112"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via lanthionine or 3-methyl-lanthionine (obsolete GO:0018081)","synonyms":[{"name":"peptide cross-linking via the thioethers lanthionine or 3-methyl-lanthionine","type":"exact"},{"name":"peptide cross-linking via the thiolethers lanthionine or 3-methyl-lanthionine","type":"exact"}],"termid":"GO:0018081"}


id: GO:0097586
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein dimer complex that possesses dolichyl-phosphate-mannose-protein mannosyltransferase activity and, in S. cerevisiae, is composed of Pmt4p.","definition_xrefs":["GOC:jd","GOC:bhm","PMID:12551906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dolichyl-phosphate-mannose-protein mannosyltransferase complex","termid":"GO:0031502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0032991","GO:0005783","GO:0005575","GO:0005737","GO:0005789"],"is_obsolete":false,"name":"dolichyl-phosphate-mannose-protein mannosyltransferase Pmt4p homodimer complex","synonyms":[{"name":"Pmt4p-Pmt4p complex","type":"narrow"},{"name":"dolichyl-phosphate-mannose-protein mannosyltransferase Pmt4p dimer","type":"exact"},{"name":"dolichyl-phosphate-mannose-protein mannosyltransferase Pmt4p-Pmt4p dimer complex","type":"exact"}],"termid":"GO:0097586"}


id: MONDO:0001398
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cancer or tumors of the ureter which may cause obstruction leading to hydroureter, hydronephrosis, and pyelonephritis. hematuria is a common symptom.","definition_xrefs":["MESH:D014516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign urinary system neoplasm","termid":"MONDO:0004180"},{"relation_name":"is_a","term_name":"ureter neoplasm","termid":"MONDO:0021111"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ureter benign neoplasm","secondary_identifiers":["UMLS:C0154016","NCIT:C3617","SCTID:92464009","DOID:11885","ICD9:223.2","MEDGEN:102303"],"synonyms":[{"name":"benign neoplasm of the ureter","type":"exact"},{"name":"benign neoplasm of ureter","type":"exact"},{"name":"benign tumor of the ureter","type":"exact"},{"name":"benign tumor of ureter","type":"exact"},{"name":"benign tumour of the ureter","type":"exact"},{"name":"benign tumour of ureter","type":"exact"},{"name":"benign ureter neoplasm","type":"exact"},{"name":"benign ureter tumor","type":"exact"},{"name":"benign ureter tumour","type":"exact"},{"name":"benign ureteral neoplasm","type":"exact"},{"name":"benign ureteral tumor","type":"exact"},{"name":"benign ureteral tumour","type":"exact"},{"name":"benign ureteric neoplasm","type":"exact"},{"name":"ureter benign neoplasm","type":"exact"},{"name":"ureteral benign neoplasm","type":"related"},{"name":"ureteral tumor","type":"broad"},{"name":"ureteral tumour","type":"broad"}],"termid":"MONDO:0001398","xrefs":{"Monarch":{"xref_id":"0001398"}}}


id: GO:0098665
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is capable of serotonin receptor activity.","definition_xrefs":["GOC:TermGenie","GOC:bhm","GO_REF:0000088","PMID:16116092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"serotonin receptor complex","synonyms":[{"name":"5-HT receptor complex","type":"exact"},{"name":"5-hydroxytryptamine receptor complex","type":"exact"},{"name":"5HT receptor complex","type":"exact"}],"termid":"GO:0098665"}


id: GO:0031060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the covalent addition of methyl groups to histones.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone methylation (obsolete GO:0031060)","termid":"GO:0031060"}


id: SO:0000102
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match to an EST or cDNA sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_match","termid":"SO:0000347"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed_sequence_match","synonyms":[{"name":"expressed sequence match","type":"exact"}],"termid":"SO:0000102"}


id: GO:0046657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of folic acid, pteroylglutamic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound catabolic process","termid":"GO:0009397"},{"relation_name":"is_a","term_name":"water-soluble vitamin catabolic process","termid":"GO:0042365"},{"relation_name":"is_a","term_name":"dicarboxylic acid catabolic process","termid":"GO:0043649"},{"relation_name":"is_a","term_name":"folic acid metabolic process","termid":"GO:0046655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"folic acid catabolic process","synonyms":[{"name":"folate catabolic process","type":"exact"},{"name":"folate catabolism","type":"exact"},{"name":"folic acid breakdown","type":"exact"},{"name":"folic acid catabolism","type":"exact"},{"name":"folic acid degradation","type":"exact"},{"name":"vitamin B9 catabolic process","type":"exact"},{"name":"vitamin B9 catabolism","type":"exact"},{"name":"vitamin M catabolic process","type":"exact"},{"name":"vitamin M catabolism","type":"exact"}],"termid":"GO:0046657"}


id: PBO:0089054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor 2 (EF-2) Eft2","termid":"PBO:0089054"}


id: GO:0034803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-hydroxy-2-naphthoate + O2 = (3E)-3-[(6Z)-6-(carboxymethylene)cyclohexa-2,4-dien-1-ylidene]-2-oxopropanate.","definition_xrefs":["UM-BBD_reactionID:r1104"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-hydroxy-2-naphthoate 2,3-dioxygenase activity (obsolete GO:0034803)","termid":"GO:0034803"}


id: MOD:01412
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to a dihydroxylated leucine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated residue","termid":"MOD:00428"},{"relation_name":"is_a","term_name":"hydroxylated leucine","termid":"MOD:01410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroxylated leucine","synonyms":[{"name":"Hy2Leu","type":"exact"}],"termid":"MOD:01412"}


id: GO:0062039
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A type of extracellular matrix that surrounds the cells within a microbial biofilm. The matrix is composed of extracellular polymeric substances including exopolysaccharides, proteins, nucleic acids, lipids, and other biomolecules.","definition_xrefs":["PMID:22571672","PMID:27129222","PMID:32663461","PMID:28516088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specialized extracellular matrix","termid":"GO:0140047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"biofilm matrix","secondary_identifiers":["PMID:28955324"],"termid":"GO:0062039"}


id: PBO:0000509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol--inositol 3-phosphatidyltransferase Pis1 (predicted)","termid":"PBO:0000509"}


id: PBO:0048405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAS8 antisense RNA 1","termid":"PBO:0048405"}


id: GO:0036499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the endoplasmic reticulum membrane stress sensor PERK (PKR-like ER kinase). Begins with activation of PERK in response to endoplasmic reticulum (ER) stress and ends with regulation of a downstream cellular process, e.g. transcription. The main substrate of PERK is the translation initiation factor eIF2alpha. Serine-phosphorylation of eIF2alpha by PERK inactivates eIF2alpha and inhibits general protein translation. In addition, eIF2alpha phosphorylation preferentially increases the translation of selective mRNAs such as ATF4 (activating transcription factor 4), which up regulates a subset of UPR genes required to restore folding capacity.","definition_xrefs":["PMID:22013210","GOC:PARL","GOC:bf","PMID:27629041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER-nucleus signaling pathway","termid":"GO:0006984"},{"relation_name":"is_a","term_name":"endoplasmic reticulum unfolded protein response","termid":"GO:0030968"},{"relation_name":"is_a","term_name":"integrated stress response signaling","termid":"GO:0140467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"PERK-mediated unfolded protein response","secondary_identifiers":["Reactome:R-HSA-381042"],"synonyms":[{"name":"EIF2AK3-mediated unfolded protein response","type":"related"},{"name":"PERK branch of UPR","type":"exact"},{"name":"PERK signal transduction pathway","type":"broad"},{"name":"PERK signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"PKR-like ER kinase signal transduction","type":"exact"},{"name":"UPR signaling by PERK stress sensor","type":"exact"},{"name":"endoplasmic reticulum unfolded protein response; PERK signaling","type":"exact"},{"name":"eukaryotic translation initiation factor 2-alpha kinase 3-mediated unfolded protein response","type":"related"}],"termid":"GO:0036499"}


id: PBO:0080949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBED3 antisense RNA 1","termid":"PBO:0080949"}


id: PBO:0070731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a pseudogene 1","termid":"PBO:0070731"}


id: GO:0030111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the activity of the Wnt signal transduction pathway.","definition_xrefs":["GOC:dph","GOC:tb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"Wnt signaling pathway","termid":"GO:0016055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Wnt signaling pathway","secondary_identifiers":["Reactome:R-HSA-8939256","GO:0008590"],"synonyms":[{"name":"regulation of Wnt receptor signaling pathway","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway","type":"exact"},{"name":"regulation of Wnt-activated signaling pathway","type":"exact"},{"name":"regulation of frizzled signaling pathway","type":"exact"},{"name":"regulation of frizzled signalling pathway","type":"exact"}],"termid":"GO:0030111"}


id: MOD:01591
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modifications that have monoisotopic mass differences from their respective origins of 304.205359 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at a resolution below 0.000001 Da","termid":"MOD:01515"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 304.199-304.206 Da","termid":"MOD:01592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modifications with monoisotopic mass differences that are nominally equal at 304.205359 Da","termid":"MOD:01591"}


id: PBO:0015240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase/ ubiquitin ligase E3 (predicted)","termid":"PBO:0015240"}


id: PBO:0034029
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_triage_status","termid":"PBO:0034029"}


id: MONDO:0018526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete serous cystadenocarcinoma of pancreas (obsolete MONDO:0018526)","termid":"MONDO:0018526","xrefs":{"Monarch":{"xref_id":"0018526"}}}


id: PBO:0050325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 27","termid":"PBO:0050325"}


id: GO:0044587
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cellopentaose, an oligosaccharide consisting of four glucose residues resulting from hydrolysis of cellulose.","definition_xrefs":["GOC:tt","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide binding","termid":"GO:0070492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cellopentaose binding","termid":"GO:0044587"}


id: MONDO:0015406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cerebrofacial arteriovenous metameric syndrome","termid":"MONDO:0015405"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebrofacial arteriovenous metameric syndrome type 1","secondary_identifiers":["UMLS:C3840102","icd11.foundation:796738143","SCTID:703267003","GARD:19959","MEDGEN:825947","Orphanet:141194"],"synonyms":[{"name":"CAMS1","type":"exact"}],"termid":"MONDO:0015406","xrefs":{"Monarch":{"xref_id":"0015406"}}}


id: PBO:0068067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 372","termid":"PBO:0068067"}


id: MONDO:0015754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cylindrical spirals myopathy (obsolete MONDO:0015754)","termid":"MONDO:0015754","xrefs":{"Monarch":{"xref_id":"0015754"}}}


id: PBO:0071201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 42","termid":"PBO:0071201"}


id: GO:1901111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of actinorhodin.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid catabolic process","termid":"GO:0043649"},{"relation_name":"is_a","term_name":"actinorhodin metabolic process","termid":"GO:1901110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"actinorhodin catabolic process","synonyms":[{"name":"actinorhodin breakdown","type":"exact"},{"name":"actinorhodin catabolism","type":"exact"},{"name":"actinorhodin degradation","type":"exact"}],"termid":"GO:1901111"}


id: GO:0075152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont receptor-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of receptor-mediated signal transduction in response to host (obsolete GO:0075152)","synonyms":[{"name":"negative regulation of symbiont receptor-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075152"}


id: PBO:0063304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCF11 cleavage and polyadenylation factor subunit","termid":"PBO:0063304"}


id: GO:0010421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Programmed cell death induced by hydrogen peroxide. Programmed cell death is the cell death resulting from activation of endogenous cellular processes.","definition_xrefs":["GOC:mtg_apoptosis","PMID:16036580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death in response to reactive oxygen species","termid":"GO:0097468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hydrogen peroxide-mediated programmed cell death","synonyms":[{"name":"programmed cell death in response to hydrogen peroxide","type":"exact"}],"termid":"GO:0010421"}


id: PBO:0000580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk14 (predicted)","termid":"PBO:0000580"}


id: GO:1903486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any establishment of actomyosin contractile ring localization that is involved in mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle","GO_REF:0000060","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete establishment of mitotic actomyosin contractile ring localization (obsolete GO:1903486)","termid":"GO:1903486"}


id: FYPO:0007533
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which arrested replication forks colocalize normally (i.e. indistinguishably from wild type) with nuclear pore complexes (NPCs). Normally, arrested replication forks relocate to NPCs as part of replication fork processing, and remain anchored at NPCs while recombination-dependent replication takes place.","definition_xrefs":["PMID:33159083","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal replication fork processing","termid":"FYPO:0007254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000293","FYPO:0000257"],"is_obsolete":false,"name":"normal replication fork colocalization with nuclear pore complex","synonyms":[{"name":"normal replication fork colocalization with NPC","type":"exact"},{"name":"normal replication fork colocalization with nuclear pore","type":"exact"},{"name":"normal replication fork colocalization with nuclear pore complex during mitotic S phase","type":"exact"},{"name":"normal replication fork colocalization with nuclear pore complex during mitotic cell cycle","type":"related"},{"name":"normal replication fork colocalization with nuclear pore complex during vegetative growth","type":"exact"},{"name":"normal replication fork relocation to nuclear pore complex","type":"exact"},{"name":"normal replication fork relocation to nuclear pore complex during mitotic S phase","type":"exact"}],"termid":"FYPO:0007533"}


id: PBO:0055403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2833","termid":"PBO:0055403"}


id: GO:0048700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a seed acquires tolerance to severe drying, before entering into a dry, either dormant or quiescent state.","definition_xrefs":["ISBN:9781405139830","GOC:PO_curators","GOC:jid","GOC:ki"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"acquisition of desiccation tolerance","termid":"GO:0097439"},{"relation_name":"part_of","term_name":"seed dormancy process","termid":"GO:0010162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acquisition of desiccation tolerance in seed","synonyms":[{"name":"acquisition of desiccation tolerance","type":"broad"}],"termid":"GO:0048700"}


id: PBO:0087276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-glutathionyl-(chloro)hydroquinone reductase (GS-HQR); glutathione transferase involved in cell-surface biosynthesis and architecture; catalyzes glutathione (GSH)-dependent reduction of GS-trichloro-p-hydroquinone to trichloro-p-hydroquinone; expression upregulated upon exposure to genotoxic agents, such as methyl methanesulfonate, cisplatin and bleomycin; not an essential gene; similar to YGR154C; green fluorescent protein (GFP)-fusion protein localizes to cytoplasm","termid":"PBO:0087276"}


id: PBO:0087030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L14B; homologous to mammalian ribosomal protein L14, no bacterial homolog; RPL14B has a paralog, RPL14A, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0087030"}


id: MONDO:0025556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"allergic asthma","termid":"MONDO:0004784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"isocyanate induced asthma","secondary_identifiers":["MEDGEN:729881","DOID:0040041","UMLS:C1321273","ICD9:506.3","SCTID:404808000"],"synonyms":[{"name":"isocyanates allergic asthma","type":"related"}],"termid":"MONDO:0025556","xrefs":{"Monarch":{"xref_id":"0025556"}}}


id: MONDO:0005555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cycloplegia is paralysis of the ciliary muscle of the eye, resulting in a loss of accommodation.","definition_xrefs":["EFO:0005758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye accommodation disease","termid":"MONDO:0000926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cycloplegia","secondary_identifiers":["UMLS:C0235238","DOID:10033","MEDGEN:536368","Wikipedia:Cycloplegia","SCTID:68158006","ICD9:367.51"],"synonyms":[{"name":"accommodative paresis","type":"related"},{"name":"ciliary muscle paresis","type":"exact"},{"name":"cycloplegia","type":"exact"},{"name":"cycloplegic paralysis of accommodation","type":"exact"},{"name":"loss of accommodation","type":"related"},{"name":"paralysis of accommodation","type":"related"},{"name":"paresis of accommodation","type":"exact"},{"name":"visual accommodation paralysis","type":"related"}],"termid":"MONDO:0005555","xrefs":{"Monarch":{"xref_id":"0005555"}}}


id: GO:0000345
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The eubacterial DNA-directed RNA polymerase is a multisubunit complex with a core composed of the essential subunits beta-prime, beta, and two copies of alpha and a fifth nonessential subunit called omega. An additional subunit, a sigma factor, is required for promoter recognition and specificity.","definition_xrefs":["PMID:11158566"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed RNA polymerase complex","termid":"GO:0000428"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005737","GO:0005829","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cytosolic DNA-directed RNA polymerase complex","termid":"GO:0000345"}


id: PBO:0081647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 572","termid":"PBO:0081647"}


id: PBO:0108701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RabGAP Gyp1","termid":"PBO:0108701"}


id: MONDO:0004440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the pineal gland.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pineal gland cancer","termid":"MONDO:0003249"},{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"},{"relation_name":"is_a","term_name":"pineal body neoplasm","termid":"MONDO:0021232"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pineal region meningioma","secondary_identifiers":["UMLS:C1335418","MEDGEN:235478","NCIT:C6756","DOID:8031"],"synonyms":[{"name":"meningioma (disease) of pineal body","type":"exact"},{"name":"meningioma of pineal area","type":"exact"},{"name":"meningioma of pineal gland","type":"exact"},{"name":"meningioma of pineal region","type":"exact"},{"name":"meningioma of the pineal area","type":"exact"},{"name":"meningioma of the pineal gland","type":"exact"},{"name":"meningioma of the pineal region","type":"exact"},{"name":"pineal area meningioma","type":"exact"},{"name":"pineal body meningioma (disease)","type":"exact"},{"name":"pineal gland meningioma","type":"exact"},{"name":"pineal meningioma","type":"exact"}],"termid":"MONDO:0004440","xrefs":{"Monarch":{"xref_id":"0004440"}}}


id: MONDO:0044033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or subacute reversible condition characterized by headaches, mental status changes, visual disturbances, and seizures associated with imaging findings of posterior leukoencephalopathy. It has been observed in association with hypertensive encephalopathy, eclampsia, and immunosuppressive and cytotoxic drug treatment.","definition_xrefs":["NCIT:C78598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hypertensive encephalopathy","termid":"MONDO:0006796"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterior leukoencephalopathy syndrome","secondary_identifiers":["SCTID:450886002","MESH:D054038","MEDGEN:163898","UMLS:C0878576"],"synonyms":[{"name":"PRES","type":"exact"},{"name":"Posterior reversible encephalopathy syndrome","type":"exact"},{"name":"RPLE","type":"exact"},{"name":"leukoencephalopathy syndrome, Posterior","type":"related"},{"name":"leukoencephalopathy syndromes, Posterior","type":"related"},{"name":"posterior reversible encephalopathy syndrome","type":"exact"},{"name":"reversible Posterior cerebral edema syndrome","type":"exact"},{"name":"reversible Posterior cerebral oedema syndrome","type":"exact"},{"name":"reversible Posterior leukoencephalopathy syndrome","type":"exact"},{"name":"reversible occipital parietal encephalopathy","type":"exact"},{"name":"reversible posterior leukoencephalopathy syndrome","type":"exact"},{"name":"syndrome, Posterior leukoencephalopathy","type":"related"},{"name":"syndromes, Posterior leukoencephalopathy","type":"related"}],"termid":"MONDO:0044033","xrefs":{"Monarch":{"xref_id":"0044033"}}}


id: PBO:0051792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQCH antisense RNA 1","termid":"PBO:0051792"}


id: GO:0098850
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the synaptic vesicle membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"synaptic vesicle membrane","termid":"GO:0030672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"extrinsic component of synaptic vesicle membrane","termid":"GO:0098850"}


id: MONDO:0014903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any benign familial infantile epilepsy in which the cause of the disease is a mutation in the SCN8A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign familial infantile epilepsy","termid":"MONDO:0017615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"seizures, benign familial infantile, 5","secondary_identifiers":["UMLS:C4310728","MEDGEN:934695","OMIM:617080","DOID:0081118","GARD:16506"],"synonyms":[{"name":"BFIS5","type":"exact"},{"name":"SCN8A benign familial infantile epilepsy","type":"exact"},{"name":"benign familial infantile epilepsy caused by mutation in SCN8A","type":"exact"},{"name":"convulsions, benign familial infantile, 5","type":"related"},{"name":"seizures, benign familial infantile, 5","type":"exact"},{"name":"seizures, benign familial infantile, 5; BFIS5","type":"exact"},{"name":"seizures, benign familial infantile, type 5","type":"exact"}],"termid":"MONDO:0014903","xrefs":{"Monarch":{"xref_id":"0014903"}}}


id: PBO:0088808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex associated protein Kti12","termid":"PBO:0088808"}


id: PBO:0013774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mst2 histone acetytransferase acytyltransferase complex, predicted phosphoric monoester hydrolase Ptf1","termid":"PBO:0013774"}


id: MONDO:0004241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteochondrosis of the growth plate near the tibial tuberosity.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone inflammation disease","termid":"MONDO:0002614"},{"relation_name":"is_a","term_name":"osteochondrosis","termid":"MONDO:0018381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Osgood-Schlatter disease","secondary_identifiers":["Orphanet:97335","ICD9:736.89","SCTID:79353000","MEDGEN:10489","UMLS:C0029376","NCIT:C34874","DOID:7489","SCTID:72047008","SCTID:430506003","MedDRA:10031130","GARD:19364"],"synonyms":[{"name":"Osgood-Schlatter disease","type":"exact"},{"name":"Osgood-Schlatter's disease","type":"exact"},{"name":"Osteochondrosis of proximal tibia","type":"exact"},{"name":"Osteochondrosis of the tibial tubercle","type":"exact"},{"name":"aseptic necrosis of the tibial tubercle","type":"exact"},{"name":"juvenile osteochondrosis of tibial tubercle","type":"exact"},{"name":"osteochondritis of the tibial tubercle","type":"exact"},{"name":"osteochondritis of tibial tubercle","type":"exact"}],"termid":"MONDO:0004241","xrefs":{"Monarch":{"xref_id":"0004241"}}}


id: GO:1990188
data:
  {"annotated_genes":["SJAG_03689","SJAG_00471"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104879,115491],"is_not":false,"summary":null,"term":"GO:1990188"}]},"cv_name":"molecular_function","definition":"Binding to euchromatin, a dispersed and relatively uncompacted form of chromatin.","definition_xrefs":["GOC:vw","PMID:22431512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin binding","termid":"GO:0003682"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00471":null,"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"euchromatin binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990188","terms_by_termid":{"GO:1990188":null}}


id: PBO:0039816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor 6","termid":"PBO:0039816"}


id: PBO:0108626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80, NuA4 and Swr1 complex actin-like protein Arp4","termid":"PBO:0108626"}


id: GO:1904812
data:
  {"annotated_genes":["SJAG_01877"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92095],"is_not":false,"summary":null,"term":"GO:1904812"}]},"cv_name":"biological_process","definition":"Any rRNA acetylation that is involved in maturation of SSU-rRNA.","definition_xrefs":["GOC:TermGenie","PMID:25402480","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA acetylation","termid":"GO:1990882"},{"relation_name":"part_of","term_name":"maturation of SSU-rRNA","termid":"GO:0030490"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0044085","GO:0042254"],"is_obsolete":false,"name":"rRNA acetylation involved in maturation of SSU-rRNA","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"rRNA acetylation involved in SSU-rRNA maturation","type":"exact"},{"name":"rRNA acetylation involved in processing of 20S pre-rRNA","type":"narrow"}],"termid":"GO:1904812","terms_by_termid":{"GO:1904812":null}}


id: PBO:0081358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 184","termid":"PBO:0081358"}


id: GO:0090056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving chlorophyll.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tetrapyrrole metabolic process","termid":"GO:1901401"},{"relation_name":"regulates","term_name":"chlorophyll metabolic process","termid":"GO:0015994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"regulation of chlorophyll metabolic process","termid":"GO:0090056"}


id: MONDO:0000969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign adipose tissue neoplasm of the pleural cavity. It may be purely intra-thoracic or extend to the chest wall.","definition_xrefs":["NCIT:C6644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"},{"relation_name":"is_a","term_name":"benign neoplasm of pleura","termid":"MONDO:0021457"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleural lipoma","secondary_identifiers":["SCTID:2460001000004103","DOID:10195","MEDGEN:233862","UMLS:C1335434"],"synonyms":[{"name":"lipoma of pleura","type":"exact"},{"name":"lipoma of the pleura","type":"exact"},{"name":"pleura lipoma","type":"exact"},{"name":"pleural lipoma","type":"exact"}],"termid":"MONDO:0000969","xrefs":{"Monarch":{"xref_id":"0000969"}}}


id: GO:0046255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 2,4,6-trinitrotoluene, 1-methyl-2,4,6-trinitrobenzene.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4,6-trinitrotoluene biosynthetic process (obsolete GO:0046255)","synonyms":[{"name":"2,4,6-trinitrotoluene anabolism","type":"exact"},{"name":"2,4,6-trinitrotoluene biosynthesis","type":"exact"},{"name":"2,4,6-trinitrotoluene biosynthetic process","type":"exact"},{"name":"2,4,6-trinitrotoluene formation","type":"exact"},{"name":"2,4,6-trinitrotoluene synthesis","type":"exact"}],"termid":"GO:0046255"}


id: GO:0009528
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner, i.e. lumen-facing, lipid bilayer of the plastid envelope; also faces the plastid stroma.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle inner membrane","termid":"GO:0019866"},{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"plastid inner membrane","termid":"GO:0009528"}


id: PBO:0061956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 12","termid":"PBO:0061956"}


id: FYPO:0004968
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which vegetative cell population growth is decreased relative to normal under conditions of phosphate starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002057","FYPO:0002060","FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"decreased vegetative cell population growth during phosphate starvation","synonyms":[{"name":"decreased vegetative cell population growth during phosphate depletion","type":"exact"},{"name":"decreased vegetative cell population growth during phosphate deprivation","type":"exact"},{"name":"decreased vegetative cell population growth during phosphate limitation","type":"exact"},{"name":"decreased vegetative cell population growth in response to phosphate starvation","type":"exact"},{"name":"reduced vegetative cell population growth during phosphate starvation","type":"exact"},{"name":"sensitive to phosphate starvation","type":"related"},{"name":"slow vegetative cell population growth during phosphate starvation","type":"narrow"}],"termid":"FYPO:0004968"}


id: PBO:0067342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 438, pseudogene","termid":"PBO:0067342"}


id: GO:0015875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of vitamins or cofactors into, out of or within a cell, or between cells.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete vitamin or cofactor transport (obsolete GO:0015875)","synonyms":[{"name":"vitamin or cofactor transport","type":"exact"}],"termid":"GO:0015875"}


id: PBO:0058739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6863","termid":"PBO:0058739"}


id: FYPO:0006400
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the frequency of DNA replication initiation is higher than normal at inefficient origins, i.e. replication origins that normally rarely fire.","definition_xrefs":["PMID:28903048","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication initiation","termid":"FYPO:0001344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0000293","FYPO:0001985"],"is_obsolete":false,"name":"increased mitotic DNA replication initiation from inefficient origin","synonyms":[{"name":"increased DNA replication initiation from inefficient origin during mitotic cell cycle","type":"exact"},{"name":"increased DNA replication initiation from inefficient origin during vegetative growth","type":"exact"},{"name":"increased firing of inefficient replication origins","type":"exact"},{"name":"increased mitotic DNA replication initiation at inefficient origin","type":"exact"},{"name":"increased mitotic DNA replication initiation from inefficient replication origin","type":"related"}],"termid":"FYPO:0006400"}


id: PBO:0065258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 23B","termid":"PBO:0065258"}


id: PBO:0031615
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transposition","termid":"PBO:0031615"}


id: MONDO:0000436
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete T-cell large granular lymphocyte leukemia (obsolete MONDO:0000436)","termid":"MONDO:0000436","xrefs":{"Monarch":{"xref_id":"0000436"}}}


id: PBO:0043093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 5","termid":"PBO:0043093"}


id: PBO:0047649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 4 pseudogene 2","termid":"PBO:0047649"}


id: GO:0035554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The signaling process in which signaling from the receptor ROBO is brought to an end, rather than being reversibly modulated.","definition_xrefs":["GOC:vk","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"termination of signal transduction","termid":"GO:0023021"},{"relation_name":"is_a","term_name":"negative regulation of Roundabout signaling pathway","termid":"GO:0035387"},{"relation_name":"part_of","term_name":"Roundabout signaling pathway","termid":"GO:0035385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"termination of Roundabout signal transduction","termid":"GO:0035554"}


id: PBO:0048382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated RAB2 interactor family member 5B","termid":"PBO:0048382"}


id: GO:0015823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of phenylalanine, 2-amino-3-phenylpropanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"phenylalanine transport","synonyms":[{"name":"L-phenylalanine transport","type":"narrow"}],"termid":"GO:0015823"}


id: PR:O74304
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- win1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase kinase win1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.09","synonyms":[{"name":"Spom972h-win1","type":"exact"}],"termid":"PR:O74304"}


id: GO:0051922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenylyl sulfate + cholesterol = adenosine 3',5'-bisphosphate + cholesterol sulfate + H+.","definition_xrefs":["PMID:11416019","PMID:12145317","PMID:12730293","RHEA:52368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol sulfotransferase activity","termid":"GO:0004027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016782","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"cholesterol sulfotransferase activity","termid":"GO:0051922"}


id: PBO:0070435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPGRIP1 like","termid":"PBO:0070435"}


id: PBO:0085613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in DNA replication; component of the Mcm2-7 hexameric helicase complex that binds chromatin as a part of the pre-replicative complex","termid":"PBO:0085613"}


id: PBO:0030709
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA_replication_origin_binding","termid":"PBO:0030709"}


id: GO:1900657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of diorcinol biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of diorcinol biosynthetic process","termid":"GO:1900655"},{"relation_name":"positively_regulates","term_name":"diorcinol biosynthetic process","termid":"GO:1900572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of diorcinol biosynthetic process","synonyms":[{"name":"activation of diorcinol anabolism","type":"exact"},{"name":"activation of diorcinol biosynthesis","type":"exact"},{"name":"activation of diorcinol biosynthetic process","type":"narrow"},{"name":"activation of diorcinol formation","type":"exact"},{"name":"activation of diorcinol synthesis","type":"exact"},{"name":"positive regulation of diorcinol anabolism","type":"exact"},{"name":"positive regulation of diorcinol biosynthesis","type":"exact"},{"name":"positive regulation of diorcinol formation","type":"exact"},{"name":"positive regulation of diorcinol synthesis","type":"exact"},{"name":"up regulation of diorcinol anabolism","type":"exact"},{"name":"up regulation of diorcinol biosynthesis","type":"exact"},{"name":"up regulation of diorcinol biosynthetic process","type":"exact"},{"name":"up regulation of diorcinol formation","type":"exact"},{"name":"up regulation of diorcinol synthesis","type":"exact"},{"name":"up-regulation of diorcinol anabolism","type":"exact"},{"name":"up-regulation of diorcinol biosynthesis","type":"exact"},{"name":"up-regulation of diorcinol biosynthetic process","type":"exact"},{"name":"up-regulation of diorcinol formation","type":"exact"},{"name":"up-regulation of diorcinol synthesis","type":"exact"},{"name":"upregulation of diorcinol anabolism","type":"exact"},{"name":"upregulation of diorcinol biosynthesis","type":"exact"},{"name":"upregulation of diorcinol biosynthetic process","type":"exact"},{"name":"upregulation of diorcinol formation","type":"exact"},{"name":"upregulation of diorcinol synthesis","type":"exact"}],"termid":"GO:1900657"}


id: MONDO:0009539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute lymphoblastic leukemia","termid":"MONDO:0004967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"lymphoblastic leukemia, acute, with lymphomatous features","secondary_identifiers":["MESH:C565429","OMIM:247640","MEDGEN:340879","UMLS:C1855472"],"synonyms":[{"name":"lall","type":"related"},{"name":"leukemia, acute lymphoblastic","type":"exact"},{"name":"lymphoblastic leukemia, acute, with lymphomatous features","type":"exact"},{"name":"lymphomatous All","type":"related"}],"termid":"MONDO:0009539","xrefs":{"Monarch":{"xref_id":"0009539"}}}


id: GO:0090105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a pancreatic E cell over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glandular epithelial cell development","termid":"GO:0002068"},{"relation_name":"part_of","term_name":"pancreatic epsilon cell differentiation","termid":"GO:0090104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreatic E cell development","termid":"GO:0090105"}


id: GO:0004298
data:
  {"annotated_genes":["SJAG_03151","SJAG_04969","SJAG_05351","SJAG_01014"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93481,97198,99733,110209],"is_not":false,"summary":null,"term":"GO:0004298"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase activity","termid":"GO:0004175"},{"relation_name":"is_a","term_name":"threonine-type peptidase activity","termid":"GO:0070003"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01014":null,"SJAG_03151":null,"SJAG_04969":null,"SJAG_05351":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0003674","GO:0016787","GO:0008233"],"is_obsolete":false,"name":"threonine-type endopeptidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9818574","Reactome:R-HSA-9818577","EC:3.4.25.-"],"synonyms":[{"name":"26S protease","type":"related"},{"name":"MCP","type":"related"},{"name":"alkaline protease","type":"related"},{"name":"ingensin","type":"related"},{"name":"large multicatalytic protease","type":"narrow"},{"name":"lens neutral proteinase","type":"narrow"},{"name":"multicatalytic endopeptidase complex","type":"related"},{"name":"multicatalytic proteinase","type":"narrow"},{"name":"multicatalytic proteinase (complex)","type":"narrow"},{"name":"prosome","type":"related"},{"name":"proteasome endopeptidase complex","type":"narrow"},{"name":"threonine endopeptidase activity","type":"exact"},{"name":"tricorn protease","type":"narrow"},{"name":"tricorn proteinase","type":"narrow"}],"termid":"GO:0004298","terms_by_termid":{"GO:0004298":null}}


id: PBO:0073863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC9A9 antisense RNA 2","termid":"PBO:0073863"}


id: PBO:0059731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 5","termid":"PBO:0059731"}


id: PBO:0046835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5 pseudogene 8","termid":"PBO:0046835"}


id: FYPO:0007308
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 5 of histone H4 in centromere outer repeat regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4 acetylation at centromere outer repeat during vegetative growth","termid":"FYPO:0002382"},{"relation_name":"is_a","term_name":"increased histone H4-K5 acetylation at centromere during vegetative growth","termid":"FYPO:0007305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0001320","FYPO:0002274","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H4-K5 acetylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"increased histone H4-K5 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"increased histone H4-K5 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K5 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"increased histone H4-K5 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"increased histone H4-K5 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"increased histone H4K5 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0007308"}


id: GO:0048936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process from a neuron whose cell body resides in the peripheral nervous system. The axon carries action potential from the cell body towards target cells.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonogenesis","termid":"GO:0007409"},{"relation_name":"part_of","term_name":"peripheral nervous system neuron development","termid":"GO:0048935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral nervous system neuron axonogenesis","termid":"GO:0048936"}


id: PBO:0058155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4450","termid":"PBO:0058155"}


id: PBO:0040644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain adjacent to zinc finger domain 1A","termid":"PBO:0040644"}


id: MONDO:0032880
data:
  {"annotated_genes":["SJAG_00714"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86291],"is_not":false,"summary":null,"term":"MONDO:0032880"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 82","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1684694","UMLS:C5231473","OMIM:618721","DOID:0080715"],"synonyms":[{"name":"DEE82","type":"exact"},{"name":"EIEE82","type":"exact"},{"name":"EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 82","type":"exact"},{"name":"Glutamate Oxaloacetate Transaminase, Mitochondrial, Deficiency of","type":"related"},{"name":"Got2 Deficiency","type":"related"},{"name":"developmental and epileptic encephalopathy 82","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 82","type":"exact"}],"termid":"MONDO:0032880","terms_by_termid":{"MONDO:0032880":null},"xrefs":{"Monarch":{"xref_id":"0032880"}}}


id: GO:0070169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of biomineral tissue development, the formation of hard tissues that consist mainly of inorganic compounds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of biomineral tissue development","termid":"GO:0070167"},{"relation_name":"positively_regulates","term_name":"biomineral tissue development","termid":"GO:0031214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of biomineral tissue development","termid":"GO:0070169"}


id: MONDO:0016105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of skeletal muscle disease that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle disorder","termid":"MONDO:0020120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acquired skeletal muscle disease","secondary_identifiers":["UMLS:C5680799","Orphanet:206638","MEDGEN:1842576"],"synonyms":[{"name":"acquired skeletal muscle disease","type":"exact"}],"termid":"MONDO:0016105","xrefs":{"Monarch":{"xref_id":"0016105"}}}


id: GO:0006703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of estrogens, C18 steroid hormones that can stimulate the development of female sexual characteristics. Also found in plants.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"estrogen metabolic process","termid":"GO:0008210"},{"relation_name":"is_a","term_name":"hormone biosynthetic process","termid":"GO:0042446"},{"relation_name":"is_a","term_name":"steroid hormone biosynthetic process","termid":"GO:0120178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"estrogen biosynthetic process","secondary_identifiers":["Reactome:R-HSA-193144"],"synonyms":[{"name":"estrogen anabolism","type":"exact"},{"name":"estrogen biosynthesis","type":"exact"},{"name":"estrogen formation","type":"exact"},{"name":"estrogen synthesis","type":"exact"},{"name":"oestrogen biosynthesis","type":"exact"},{"name":"oestrogen biosynthetic process","type":"exact"}],"termid":"GO:0006703"}


id: FYPO:0003037
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01374:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01374","name":"nup132delta","uniquename":"SJAG_01374:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_01834:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01834","name":"pom152delta","uniquename":"SJAG_01834:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_02252:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02252","name":"ace2delta","uniquename":"SJAG_02252:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic 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phenotype","references_by_uniquename":{"PMID:21802294":null,"PMID:22300943":null,"PMID:23786411":null,"PMID:24184107":null,"PMID:24699070":null,"PMID:25318672":null,"PMID:25866389":null,"PMID:26774782":null,"PMID:27059155":null,"PMID:27678009":null,"PMID:28954740":null,"PMID:29566183":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:31150379":null,"PMID:32109380":null,"PMID:32243490":null,"PMID:32915139":null,"PMID:33495454":null,"PMID:33791858":null,"PMID:34198697":null,"PMID:35226668":null,"PMID:36058798":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_01787","SJAG_03581","SJAG_01143","SJAG_01745","SJAG_01330","SJAG_01050","SJAG_03783","SJAG_02763","SJAG_04697","SJAG_02013","SJAG_02819","SJAG_01906","SJAG_01834","SJAG_00118","SJAG_04489","SJAG_00426","SJAG_01242","SJAG_03351","SJAG_03596","SJAG_02252","SJAG_00266","SJAG_04703","SJAG_04912","SJAG_04464","SJAG_03250","SJAG_03143","SJAG_02392","SJAG_04522","SJAG_04349","SJAG_02796","SJAG_03575","SJAG_03940","SJAG_03892","SJAG_04312","SJAG_04284","SJAG_04280","SJAG_01374","SJAG_00514","SJAG_03048","SJAG_05207","SJAG_04551","SJAG_04332","SJAG_03891","SJAG_01794","SJAG_03444","SJAG_03449","SJAG_03453","SJAG_00028","SJAG_03689","SJAG_00610","SJAG_00409","SJAG_01956","SJAG_02592"],"single_locus_genotype_uniquenames":["cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","lem2delta","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","pck2delta","Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1delta","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","cmp7delta","vps4delta","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","pyp1delta","ras1delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","gpd1delta","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","sst4delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","vps25delta","did4delta","pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","pck1delta","agn1delta","man1delta","cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","nem1delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","nur1delta","wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","ace2delta","atf1delta","nup132delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","vps28delta","scd2delta","mid1delta","scd1delta","dcr1delta","vps32delta","pom152delta","vps24delta","for3delta","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","pom1delta","gms1delta","rga6delta","nem2delta","alx1delta","rga4delta","mad2delta","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","efc25delta","ned1-5A-S499A__S538A__T620A__T638A__S651A-amino_acid_mutation-expression-not_assayed_or_wild_type","pka1delta","sty1delta","mid2delta","sep1delta","gef1delta","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","nup61delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal fission yeast cell phenotype","type":"exact"}],"termid":"FYPO:0003037","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000102":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000207":null,"FYECO:0000248":null,"FYECO:0000314":null,"FYECO:0000338":null,"FYPO:0000026":null,"FYPO:0000118":null,"FYPO:0000198":null,"FYPO:0000231":null,"FYPO:0000324":null,"FYPO:0000356":null,"FYPO:0000595":null,"FYPO:0000618":null,"FYPO:0000619":null,"FYPO:0000648":null,"FYPO:0000671":null,"FYPO:0000729":null,"FYPO:0000731":null,"FYPO:0000815":null,"FYPO:0001038":null,"FYPO:0001122":null,"FYPO:0001132":null,"FYPO:0001327":null,"FYPO:0001369":null,"FYPO:0001370":null,"FYPO:0001375":null,"FYPO:0001440":null,"FYPO:0001556":null,"FYPO:0001784":null,"FYPO:0001838":null,"FYPO:0001877":null,"FYPO:0001956":null,"FYPO:0001971":null,"FYPO:0002026":null,"FYPO:0002033":null,"FYPO:0002227":null,"FYPO:0002380":null,"FYPO:0002678":null,"FYPO:0002680":null,"FYPO:0002870":null,"FYPO:0002998":null,"FYPO:0003315":null,"FYPO:0003657":null,"FYPO:0003727":null,"FYPO:0003738":null,"FYPO:0003779":null,"FYPO:0003946":null,"FYPO:0003973":null,"FYPO:0003976":null,"FYPO:0004105":null,"FYPO:0004205":null,"FYPO:0004318":null,"FYPO:0004573":null,"FYPO:0004695":null,"FYPO:0004718":null,"FYPO:0004890":null,"FYPO:0004982":null,"FYPO:0005503":null,"FYPO:0005957":null,"FYPO:0006054":null,"FYPO:0006433":null,"FYPO:0006557":null,"FYPO:0006616":null,"FYPO:0006945":null,"FYPO:0007073":null,"FYPO:0007177":null,"FYPO:0007363":null,"FYPO:0007701":null,"FYPO:0007770":null,"FYPO:0007771":null,"FYPO:0007772":null,"FYPO:0007783":null,"FYPO:0007824":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null,"GO:0000815":null}}


id: MONDO:0019930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Leydig cell hypoplasia, type 1","termid":"MONDO:0009384"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leydig cell hypoplasia due to complete LH resistance","secondary_identifiers":["DOID:0112260","Orphanet:96265","UMLS:C5438974","MEDGEN:1776152","GARD:16851"],"synonyms":[{"name":"46,XY DSD due to complete LH receptor inactivation","type":"exact"},{"name":"46,XY DSD due to complete LH resistance","type":"exact"},{"name":"46,XY DSD due to complete luteinizing hormone receptor inactivation","type":"exact"},{"name":"46,XY DSD due to complete luteinizing hormone resistance","type":"exact"},{"name":"46,XY disorder of sex development due to complete LH receptor inactivation","type":"exact"},{"name":"46,XY disorder of sex development due to complete LH resistance","type":"exact"},{"name":"46,XY disorder of sex development due to complete luteinizing hormone receptor inactivation","type":"exact"},{"name":"46,XY disorder of sex development due to complete luteinizing hormone resistance","type":"exact"},{"name":"Leydig cell hypoplasia due to complete LH receptor inactivation","type":"exact"},{"name":"Leydig cell hypoplasia due to complete luteinizing hormone receptor inactivation","type":"exact"},{"name":"Leydig cell hypoplasia due to complete luteinizing hormone resistance","type":"exact"}],"termid":"MONDO:0019930","xrefs":{"Monarch":{"xref_id":"0019930"}}}


id: GO:0034549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-cyclopropylammelide + H2O = cyclopropylamine + cyanuric acid.","definition_xrefs":["UM-BBD_reactionID:r0827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"N-cyclopropylammelide alkylamino hydrolase activity","secondary_identifiers":["KEGG_REACTION:R06972","MetaCyc:RXN-8020"],"termid":"GO:0034549"}


id: PBO:0084119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heme a synthase; required for the hydroxylation of heme O to form heme A, an essential prosthetic group for cytochrome c oxidase; oligomerization is required for function","termid":"PBO:0084119"}


id: GO:0061065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of dauer larval development, the process whose specific outcome is the progression of the dauer larva over time, through the facultative diapause of the dauer (enduring) larval stage, with specialized traits adapted for dispersal and long-term survival, with elevated stress resistance and without feeding.","definition_xrefs":["GOC:kmv","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nematode larval development","termid":"GO:0061062"},{"relation_name":"regulates","term_name":"dauer larval development","termid":"GO:0040024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dauer larval development","termid":"GO:0061065"}


id: PBO:0027737
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_actomyosin_contractile_ring_during_mitotic_anaphase","termid":"PBO:0027737"}


id: PBO:0065374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy specific beta-1-glycoprotein 2","termid":"PBO:0065374"}


id: PBO:0005774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoamyl acetate hydrolytic enzyme Iah1 (predicted)","termid":"PBO:0005774"}


id: GO:2000550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of B cell chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lymphocyte chemotaxis","termid":"GO:1901624"},{"relation_name":"is_a","term_name":"regulation of B cell chemotaxis","termid":"GO:2000537"},{"relation_name":"negatively_regulates","term_name":"B cell chemotaxis","termid":"GO:0035754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of B cell chemotaxis","termid":"GO:2000550"}


id: GO:0051105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of DNA ligation, the re-formation of a broken phosphodiester bond in the DNA backbone, carried out by DNA ligase.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA ligation (obsolete GO:0051105)","termid":"GO:0051105"}


id: PBO:0017498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zn(2)-C6 fungal-type DNA-binding transcription factor, truncated","termid":"PBO:0017498"}


id: MONDO:0017664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic myoclonus (obsolete MONDO:0017664)","termid":"MONDO:0017664","xrefs":{"Monarch":{"xref_id":"0017664"}}}


id: PBO:0091935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere proximal small non-coding RNA","termid":"PBO:0091935"}


id: PBO:0046242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 36","termid":"PBO:0046242"}


id: GO:0034601
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + CoA + NAD(P)+ = succinyl-CoA + CO2 + NAD(P)H.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxoglutarate dehydrogenase [NAD(P)+] activity","termid":"GO:0034601"}


id: PBO:0050870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDH1 antisense RNA 1","termid":"PBO:0050870"}


id: PBO:0069719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 999, pseudogene","termid":"PBO:0069719"}


id: PBO:0068990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 234, pseudogene","termid":"PBO:0068990"}


id: GO:1903612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium-dependent ATPase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:10861851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ATP-dependent activity","termid":"GO:0032781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of calcium-dependent ATPase activity","synonyms":[{"name":"activation of calcium-dependent ATPase activity","type":"narrow"},{"name":"up regulation of calcium-dependent ATPase activity","type":"exact"},{"name":"up-regulation of calcium-dependent ATPase activity","type":"exact"},{"name":"upregulation of calcium-dependent ATPase activity","type":"exact"}],"termid":"GO:1903612"}


id: GO:0098757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-21 stimulus.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interleukin-21","termid":"GO:0098756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-21","synonyms":[{"name":"cellular response to IL-21","type":"exact"}],"termid":"GO:0098757"}


id: MONDO:0014849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive nonsyndromic deafness 105 (obsolete MONDO:0014849)","secondary_identifiers":["OMIM:616958"],"termid":"MONDO:0014849","xrefs":{"Monarch":{"xref_id":"0014849"}}}


id: FYPO:0004188
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is abolished during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during vegetative growth","termid":"FYPO:0001424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to nucleus during cellular response to hydroxyurea","synonyms":[{"name":"abolished protein localisation to nucleus during cellular response to hydroxyurea","type":"exact"},{"name":"abolished protein localization to nucleus during cellular response to HU","type":"exact"},{"name":"abolished protein localization to nucleus during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to nucleus during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"nuclear exclusion during cellular response to hydroxyurea","type":"related"},{"name":"nuclear protein exclusion during cellular response to hydroxyurea","type":"related"},{"name":"protein localization to nucleus abolished during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0004188"}


id: PBO:0064551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 13, pseudogene","termid":"PBO:0064551"}


id: MONDO:1012294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polymicrogyria and asymmetrical ventricular dilation, non-human animal","termid":"MONDO:1011864"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymicrogyria and asymmetrical ventricular dilation, dog","secondary_identifiers":["OMIA:001098-9615"],"termid":"MONDO:1012294","xrefs":{"Monarch":{"xref_id":"1012294"}}}


id: MONDO:0001864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary angle-closure glaucoma","termid":"MONDO:0001868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"residual stage angle-closure glaucoma","secondary_identifiers":["UMLS:C0154948","DOID:1404","ICD9:365.24","MEDGEN:509737","SCTID:55129006"],"synonyms":[{"name":"residual stage of angle-closure glaucoma","type":"exact"}],"termid":"MONDO:0001864","xrefs":{"Monarch":{"xref_id":"0001864"}}}


id: PBO:0065592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 8","termid":"PBO:0065592"}


id: GO:0009383
data:
  {"annotated_genes":["SJAG_02417","SJAG_03877"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95105,113112],"is_not":false,"summary":null,"term":"GO:0009383"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to cytosine to form 5-methylcytosine in small subunit ribosomal RNA.","definition_xrefs":["PMID:18786544","PMID:10026269","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-methyltransferase activity","termid":"GO:0008169"},{"relation_name":"is_a","term_name":"rRNA (cytosine) methyltransferase activity","termid":"GO:0016434"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02417":null,"SJAG_03877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824","GO:0140098"],"is_obsolete":false,"name":"rRNA (cytosine-C5-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6790944","Reactome:R-HSA-6793057"],"synonyms":[{"name":"rRNA (cytosine-C5-967)-methyltransferase activity","type":"narrow"},{"name":"rRNA m5C967 methyltransferase activity","type":"narrow"}],"termid":"GO:0009383","terms_by_termid":{"GO:0009383":null}}


id: GO:0060020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroepithelial cells of the neural tube give rise to Brgmann glial cells, specialized bipotential progenitors cells of the cerebellum. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["PMID:10375501","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astrocyte differentiation","termid":"GO:0048708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Bergmann glial cell differentiation","termid":"GO:0060020"}


id: PBO:0082970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein that regulates protein phosphatase 1 Glc7p; overexpression relocalizes Glc7p from the nucleus and prevents chromosome segregation; may interact with ribosomes, based on co-purification experiments; GIP3 has a paralog, HER1, that arose from the whole genome duplication","termid":"PBO:0082970"}


id: MONDO:0001402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the vagina. Representative examples include carcinomas and sarcomas.","definition_xrefs":["NCIT:C7410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive organ cancer","termid":"MONDO:0001416"},{"relation_name":"is_a","term_name":"vaginal neoplasm","termid":"MONDO:0021050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vaginal cancer","secondary_identifiers":["DOID:119","MEDGEN:12040","ICD9:184.0","MESH:D014625","SCTID:363445000","UMLS:C0042237"],"synonyms":[{"name":"cancer of vagina","type":"exact"},{"name":"malignant neoplasm of the vagina","type":"exact"},{"name":"malignant neoplasm of vagina","type":"exact"},{"name":"malignant tumor of the vagina","type":"exact"},{"name":"malignant tumor of vagina","type":"exact"},{"name":"malignant tumour of the vagina","type":"exact"},{"name":"malignant tumour of vagina","type":"exact"},{"name":"malignant vagina neoplasm","type":"exact"},{"name":"malignant vagina tumor","type":"exact"},{"name":"malignant vagina tumour","type":"exact"},{"name":"malignant vaginal neoplasm","type":"exact"},{"name":"malignant vaginal tumor","type":"exact"},{"name":"malignant vaginal tumour","type":"exact"},{"name":"vagina cancer","type":"exact"},{"name":"vagina neoplasm","type":"broad"},{"name":"vaginal tumor","type":"broad"},{"name":"vaginal tumour","type":"broad"}],"termid":"MONDO:0001402","xrefs":{"Monarch":{"xref_id":"0001402"}}}


id: PR:P41000
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cps3 gene.","definition_xrefs":["UniProtKB:P41000","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein cps3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.02","synonyms":[{"name":"Spom972h-cps3","type":"exact"},{"name":"meiotically up-regulated gene 188 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P41000"}


id: GO:0060023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of the soft palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. The soft palate is the posterior portion of the palate extending from the posterior edge of the hard palate.","definition_xrefs":["ISBN:0721662544","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"secondary palate development","termid":"GO:0062009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"soft palate development","synonyms":[{"name":"palatum molle development","type":"exact"},{"name":"velum palatum development","type":"exact"}],"termid":"GO:0060023"}


id: GO:0045099
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A type of intermediate filament.","definition_xrefs":["ISBN:0716731363"],"gene_count":0,"genotype_count":0,"name":"obsolete vimentin (obsolete GO:0045099)","synonyms":[{"name":"vimentin","type":"exact"}],"termid":"GO:0045099"}


id: PBO:0058188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4481","termid":"PBO:0058188"}


id: GO:1903496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 11-deoxycorticosterone stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","GOC:mr","PMID:3585228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mineralocorticoid","termid":"GO:0051385"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 11-deoxycorticosterone","termid":"GO:1903496"}


id: MONDO:0035787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic anorectal malformation without fistula (obsolete MONDO:0035787)","secondary_identifiers":["Orphanet:601002"],"termid":"MONDO:0035787","xrefs":{"Monarch":{"xref_id":"0035787"}}}


id: GO:0021741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the spinal trigeminal nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:curators","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trigeminal sensory nucleus development","termid":"GO:0021730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal trigeminal nucleus development","termid":"GO:0021741"}


id: GO:0046745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a capsid acquires another membrane envelope, subsequent to acquiring an initial membrane envelope.","definition_xrefs":["PMID:11533156","ISBN:0781718325","ISBN:0072370319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral capsid secondary envelopment","secondary_identifiers":["GO:0046770","GO:0046746","GO:0046748","GO:0046747","GO:0046768","GO:0046769"],"synonyms":[{"name":"ER membrane viral budding during viral capsid re-envelopment","type":"related"},{"name":"Golgi membrane viral budding during viral capsid re-envelopment","type":"related"},{"name":"endoplasmic reticulum membrane viral budding during viral capsid re-envelopment","type":"related"},{"name":"inner nuclear membrane viral budding during viral capsid re-envelopment","type":"related"},{"name":"nuclear membrane viral budding during viral capsid re-envelopment","type":"related"},{"name":"outer nuclear membrane viral budding during viral capsid re-envelopment","type":"exact"},{"name":"plasma membrane viral budding during viral capsid re-envelopment","type":"related"},{"name":"viral budding from ER membrane by viral capsid re-envelopment","type":"exact"},{"name":"viral budding from ER membrane during viral capsid re-envelopment","type":"related"},{"name":"viral budding from Golgi membrane by viral capsid re-envelopment","type":"exact"},{"name":"viral budding from Golgi membrane during viral capsid re-envelopment","type":"related"},{"name":"viral budding from inner nuclear membrane by viral capsid re-envelopment","type":"exact"},{"name":"viral budding from inner nuclear membrane during viral capsid re-envelopment","type":"related"},{"name":"viral budding from nuclear membrane by viral capsid re-envelopment","type":"exact"},{"name":"viral budding from nuclear membrane during viral capsid re-envelopment","type":"related"},{"name":"viral budding from outer nuclear membrane by viral capsid re-envelopment","type":"exact"},{"name":"viral budding from outer nuclear membrane during viral capsid re-envelopment","type":"exact"},{"name":"viral budding from plasma membrane by viral capsid re-envelopment","type":"exact"},{"name":"viral budding from plasma membrane during viral capsid re-envelopment","type":"related"},{"name":"viral capsid re-envelopment","type":"related"},{"name":"virus budding from ER membrane by viral capsid re-envelopment","type":"exact"},{"name":"virus budding from ER membrane during viral capsid re-envelopment","type":"related"},{"name":"virus budding from Golgi membrane by viral capsid re-envelopment","type":"exact"},{"name":"virus budding from Golgi membrane during viral capsid re-envelopment","type":"related"},{"name":"virus budding from inner nuclear membrane by viral capsid re-envelopment","type":"exact"},{"name":"virus budding from inner nuclear membrane during viral capsid re-envelopment","type":"related"},{"name":"virus budding from nuclear membrane by viral capsid re-envelopment","type":"exact"},{"name":"virus budding from nuclear membrane during viral capsid re-envelopment","type":"related"},{"name":"virus budding from outer nuclear membrane by viral capsid re-envelopment","type":"exact"},{"name":"virus budding from outer nuclear membrane during viral capsid re-envelopment","type":"related"},{"name":"virus budding from plasma membrane during viral capsid re-envelopment","type":"related"}],"termid":"GO:0046745"}


id: MONDO:0003729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infiltration of the skin and subcutaneous tissue by leukemic cells without evidence of leukemia in the bone marrow and peripheral blood. It results in clinically identifiable skin lesions. It may be the first manifestation of acute leukemia, preceding the involvement of the bone marrow and peripheral blood by the leukemic process.","definition_xrefs":["NCIT:C4983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aleukemic leukemia","termid":"MONDO:0003730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"aleukemic leukemia cutis","secondary_identifiers":["MEDGEN:168394","UMLS:C0887846","DOID:6003"],"synonyms":[{"name":"aleukemic leukemia cutis","type":"exact"},{"name":"leukaemia subleukemic","type":"related"},{"name":"leukemia subleukemic","type":"related"}],"termid":"MONDO:0003729","xrefs":{"Monarch":{"xref_id":"0003729"}}}


id: PBO:0085996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; shares a promoter with YNL194C; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; YNL195C has a paralog, HBT1, that arose from the whole genome duplication","termid":"PBO:0085996"}


id: PBO:0091442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial conserved fungal protein Rrg8","termid":"PBO:0091442"}


id: PBO:0090795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT-binding factor complex repressor Php4","termid":"PBO:0090795"}


id: MONDO:0005755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Viral disease of horses caused by the equine infectious anemia virus (eiav; infectious anemia virus, equine). It is characterized by intermittent fever, weakness, and anemia. Chronic infection consists of acute episodes with remissions.","definition_xrefs":["MESH:D004859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"},{"relation_name":"is_a","term_name":"equine neoplasm","termid":"MONDO:0700170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"equine infectious anemia","secondary_identifiers":["EFO:0007263","NCIT:C84694"],"termid":"MONDO:0005755","xrefs":{"Monarch":{"xref_id":"0005755"}}}


id: FYPO:0001144
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of Man8GlcNAc2 measured in a cell is lower than normal. Man8GlcNAc2 is any N-glycan that consists of a branched ten-membered mannooligosaccharide containing eight D-mannosyl residues and two N-acetylglucosamine residues.","definition_xrefs":["CHEBI:64052","CHEBI:64048","PMID:12686557","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased polysaccharide level during vegetative growth","termid":"FYPO:0001080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased Man8GlcNAc level","synonyms":[{"name":"decreased Man8GlcNAc accumulation","type":"related"},{"name":"decreased Man8GlcNAc level during mitotic cell cycle","type":"related"},{"name":"decreased Man8GlcNAc level during vegetative growth","type":"exact"},{"name":"decreased Man8GlcNAc2 level","type":"exact"},{"name":"decreased cellular Man8GlcNAc level","type":"exact"},{"name":"reduced Man8GlcNAc level","type":"exact"}],"termid":"FYPO:0001144"}


id: MOD:00475
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 2-amino-L-tyrosine.","definition_xrefs":["PubMed:8839040","PubMed:9252331","Unimod:342#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"aminated residue","termid":"MOD:02039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-amino-L-tyrosine","synonyms":[{"name":"Amino","type":"related"},{"name":"Tyrosine oxidation to 2-aminotyrosine","type":"related"}],"termid":"MOD:00475"}


id: PBO:0081595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 519 pseudogene 1","termid":"PBO:0081595"}


id: RO:0002371
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a is attached to b if and only if a and b are discrete objects or object parts, and there are physical connections between a and b such that a force pulling a will move b, or a force pulling b will move a","direct_ancestors":[{"relation_name":"is_a","term_name":"connected_to","termid":"RO:0002170"},{"relation_name":"is_a","term_name":"attached_to_part_of","termid":"RO:0002177"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attached_to","termid":"RO:0002371"}


id: MONDO:0021190
data:
  {"annotated_genes":["SJAG_04418","SJAG_02708","SJAG_01887","SJAG_02828","SJAG_00995","SJAG_02031","SJAG_04410","SJAG_05180","SJAG_00611","SJAG_02187","SJAG_01677","SJAG_02242","SJAG_03206","SJAG_01207","SJAG_04540","SJAG_00640","SJAG_01049","SJAG_04791","SJAG_02556","SJAG_04190","SJAG_04114","SJAG_02226","SJAG_02334","SJAG_01410","SJAG_01620","SJAG_03923","SJAG_02748","SJAG_02339"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008842"},{"annotations":[85761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014399"},{"annotations":[86345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008955"},{"annotations":[85172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012553"},{"annotations":[84500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014696"},{"annotations":[85173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012554"},{"annotations":[85526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019569"},{"annotations":[85561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019570"},{"annotations":[85806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013248"},{"annotations":[86230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013499"},{"annotations":[84511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014108"},{"annotations":[86485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014986"},{"annotations":[86489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014987"},{"annotations":[86486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014985"},{"annotations":[86435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010159"},{"annotations":[85267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030840"},{"annotations":[85268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030841"},{"annotations":[85183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030843"},{"annotations":[86734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009623"},{"annotations":[85025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013118"},{"annotations":[85091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011801"},{"annotations":[86103,86102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018996"},{"annotations":[86502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011125"},{"annotations":[84781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014615"},{"annotations":[84782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014619"},{"annotations":[86252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010909"},{"annotations":[85777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013829"},{"annotations":[86137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010210"},{"annotations":[85346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012531"},{"annotations":[86157,86158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010211"},{"annotations":[86166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010212"},{"annotations":[86125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010215"},{"annotations":[86076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010216"},{"annotations":[86113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010214"}]},"cv_name":"mondo","definition":"A disease that has its basis in the disruption of DNA repair.","definition_xrefs":["MONDO:patterns/basis_in_disruption_of_process"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00611":null,"SJAG_00640":null,"SJAG_00995":null,"SJAG_01049":null,"SJAG_01207":null,"SJAG_01410":null,"SJAG_01620":null,"SJAG_01677":null,"SJAG_01887":null,"SJAG_02031":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02242":null,"SJAG_02334":null,"SJAG_02339":null,"SJAG_02556":null,"SJAG_02708":null,"SJAG_02748":null,"SJAG_02828":null,"SJAG_03206":null,"SJAG_03923":null,"SJAG_04114":null,"SJAG_04190":null,"SJAG_04410":null,"SJAG_04418":null,"SJAG_04540":null,"SJAG_04791":null,"SJAG_05180":null},"genotype_count":0,"in_subsets":["pombe_mondo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"DNA repair disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C7757","UMLS:C0268134","MEDGEN:82774","MESH:D049914","EFO:0008499"],"synonyms":[{"name":"DNA Repairs, deficient","type":"related"},{"name":"DNA repair deficiency","type":"related"},{"name":"DNA repair deficiency disorders","type":"related"},{"name":"DNA repair disorder","type":"exact"},{"name":"DNA repair, deficient","type":"related"},{"name":"DNA repair-deficiencies","type":"related"},{"name":"DNA repair-deficiency","type":"related"},{"name":"DNA repair-deficiency disorder","type":"related"},{"name":"Repairs, deficient DNA","type":"related"},{"name":"chromosome instability syndrome","type":"related"},{"name":"chromosome instability syndromes","type":"related"},{"name":"deficiency of DNA repair","type":"exact"},{"name":"deficient DNA Repairs","type":"related"},{"name":"deficient DNA repair","type":"related"},{"name":"disorder of DNA repair","type":"exact"},{"name":"disorder, DNA repair-deficiency","type":"related"},{"name":"disorders, DNA repair-deficiency","type":"related"},{"name":"repair, deficient DNA","type":"related"},{"name":"syndrome, chromosome instability","type":"related"},{"name":"syndromes, chromosome instability","type":"related"}],"termid":"MONDO:0021190","terms_by_termid":{"MONDO:0008842":null,"MONDO:0008955":null,"MONDO:0009623":null,"MONDO:0010159":null,"MONDO:0010210":null,"MONDO:0010211":null,"MONDO:0010212":null,"MONDO:0010214":null,"MONDO:0010215":null,"MONDO:0010216":null,"MONDO:0010909":null,"MONDO:0011125":null,"MONDO:0011801":null,"MONDO:0012531":null,"MONDO:0012553":null,"MONDO:0012554":null,"MONDO:0013118":null,"MONDO:0013248":null,"MONDO:0013499":null,"MONDO:0013829":null,"MONDO:0014108":null,"MONDO:0014399":null,"MONDO:0014615":null,"MONDO:0014619":null,"MONDO:0014696":null,"MONDO:0014985":null,"MONDO:0014986":null,"MONDO:0014987":null,"MONDO:0018996":null,"MONDO:0019569":null,"MONDO:0019570":null,"MONDO:0030840":null,"MONDO:0030841":null,"MONDO:0030843":null},"xrefs":{"Monarch":{"xref_id":"0021190"}}}


id: MONDO:0006765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the genus fusobacterium.","definition_xrefs":["MESH:D005674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fusobacteriaceae infectious disease","termid":"MONDO:0006925"},{"relation_name":"is_a","term_name":"anaerobic bacteria infectious disease","termid":"MONDO:0024389"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fusobacterium infectious disease","secondary_identifiers":["MEDGEN:872278","UMLS:C4039413","EFO:1000943","SCTID:712657002","ICD9:041.84"],"synonyms":[{"name":"Fusobacterium caused disease or disorder","type":"exact"},{"name":"Fusobacterium disease or disorder","type":"exact"},{"name":"infection caused by Fusobacterium","type":"related"},{"name":"infection due to Fusobacterium","type":"exact"}],"termid":"MONDO:0006765","xrefs":{"Monarch":{"xref_id":"0006765"}}}


id: GO:0019772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with low affinity with an immunoglobulin of an IgG isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgG receptor activity","termid":"GO:0019770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"low-affinity IgG receptor activity","synonyms":[{"name":"low affinity Fc receptor activity","type":"related"},{"name":"low affinity IgG receptor activity","type":"exact"}],"termid":"GO:0019772"}


id: PBO:0084176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histidinol-phosphate aminotransferase; catalyzes the seventh step in histidine biosynthesis; responsive to general control of amino acid biosynthesis; mutations cause histidine auxotrophy and sensitivity to Cu, Co, and Ni salts","termid":"PBO:0084176"}


id: GO:0009266
data:
  {"annotated_genes":["SJAG_03815","SJAG_02426","SJAG_04055","SJAG_04187","SJAG_04082","SJAG_01186","SJAG_04388","SJAG_04567","SJAG_02381","SJAG_01584","SJAG_02266","SJAG_00436","SJAG_03319","SJAG_03527","SJAG_03949"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103709,103822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070370"},{"annotations":[114995,109496,90292,114994,104485,104772,109497,95177,95966,88316,91570,100032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034605"},{"annotations":[90293],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071502"},{"annotations":[115914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a temperature stimulus.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00436":null,"SJAG_01186":null,"SJAG_01584":null,"SJAG_02266":null,"SJAG_02381":null,"SJAG_02426":null,"SJAG_03319":null,"SJAG_03527":null,"SJAG_03815":null,"SJAG_03949":null,"SJAG_04055":null,"SJAG_04082":null,"SJAG_04187":null,"SJAG_04388":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to temperature stimulus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to thermal stimulus","type":"exact"}],"termid":"GO:0009266","terms_by_termid":{"GO:0031990":null,"GO:0034605":null,"GO:0070370":null,"GO:0071502":null}}


id: MONDO:0004216
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A germinoma that arises from the pineal gland.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant pineal area germ cell neoplasm","termid":"MONDO:0002073"},{"relation_name":"is_a","term_name":"brain germinoma","termid":"MONDO:0002214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pineal region germinoma","secondary_identifiers":["MEDGEN:208928","UMLS:C0854912","NCIT:C8712","Orphanet:91352","GARD:19162","DOID:7428"],"synonyms":[{"name":"germinoma","type":"broad"},{"name":"pineal germinoma","type":"exact"}],"termid":"MONDO:0004216","xrefs":{"Monarch":{"xref_id":"0004216"}}}


id: PBO:0075607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPON1 antisense RNA 1","termid":"PBO:0075607"}


id: PBO:0080626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 73","termid":"PBO:0080626"}


id: PBO:0047098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 151 member A","termid":"PBO:0047098"}


id: PBO:0050729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 15","termid":"PBO:0050729"}


id: MONDO:0012294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete drug metabolism, poor, Cyp2C19-related (obsolete MONDO:0012294)","secondary_identifiers":["OMIM:609535"],"synonyms":[{"name":"Mephenytoin, poor metabolism of","type":"related"},{"name":"Omeprazole, poor metabolism of","type":"related"},{"name":"Opremazole, poor metabolism of","type":"related"},{"name":"Proguanil, poor metabolism of","type":"related"},{"name":"clopidogrel, impaired responsiveness to","type":"exact"},{"name":"clopidogrel, poor metabolism of","type":"related"},{"name":"drug metabolism, poor, Cyp2C19-related","type":"exact"},{"name":"mephenytoin poor metabolizer","type":"exact"},{"name":"omeprazole poor metabolizer","type":"exact"},{"name":"proguanil poor metabolizer","type":"exact"}],"termid":"MONDO:0012294","xrefs":{"Monarch":{"xref_id":"0012294"}}}


id: GO:0140936
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone deubiquitinase that cleaves ubiquitin from a histone H2B protein to which it is conjugated.","definition_xrefs":["PMID:18206972","PMID:29352077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deubiquitinase activity","termid":"GO:0140934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0140096","GO:0008233"],"is_obsolete":false,"name":"histone H2B deubiquitinase activity","synonyms":[{"name":"histone H2B deubiquitination","type":"related"}],"termid":"GO:0140936"}


id: PR:Q9UUA1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC23B6.01c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUA1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol-binding protein homolog C23B6.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC23B6.01c","synonyms":[{"name":"Spom972h-SPCC23B6.01c","type":"exact"}],"termid":"PR:Q9UUA1"}


id: PBO:0061261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notch 2 N-terminal like R","termid":"PBO:0061261"}


id: PBO:0085287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal signal receptor for peroxisomal matrix proteins; recognizes the N-terminal nonapeptide signal (PTS2); WD repeat protein; defects in human homolog cause lethal rhizomelic chondrodysplasia punctata (RCDP)","termid":"PBO:0085287"}


id: PBO:0060284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 1","termid":"PBO:0060284"}


id: PBO:0031485
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_meiotic_spindle","termid":"PBO:0031485"}


id: PBO:0003889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Rrs1 (predicted)","termid":"PBO:0003889"}


id: FYPO:0001479
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"abnormal alpha,alpha-trehalase activity","synonyms":[{"name":"abnormal neutral trehalase activity","type":"exact"},{"name":"abnormal trehalase activity","type":"broad"}],"termid":"FYPO:0001479"}


id: GO:0001910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of leukocyte mediated cytotoxicity.","definition_xrefs":["ISBN:0781735149","PMID:11911826","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte mediated immunity","termid":"GO:0002703"},{"relation_name":"is_a","term_name":"regulation of cell killing","termid":"GO:0031341"},{"relation_name":"regulates","term_name":"leukocyte mediated cytotoxicity","termid":"GO:0001909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leukocyte mediated cytotoxicity","synonyms":[{"name":"regulation of immune cell mediated cell death","type":"exact"},{"name":"regulation of immune cell mediated cell killing","type":"exact"},{"name":"regulation of immune cell mediated cytotoxicity","type":"exact"},{"name":"regulation of leucocyte mediated cytotoxicity","type":"exact"}],"termid":"GO:0001910"}


id: MONDO:0012604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any isolated microphthalmia in which the cause of the disease is a mutation in the RAX gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated microphthalmia","termid":"MONDO:0000062"},{"relation_name":"is_a","term_name":"isolated anophthalmia-microphthalmia syndrome","termid":"MONDO:0016764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated microphthalmia 3","secondary_identifiers":["MEDGEN:1823955","MESH:C567025","UMLS:C5774181","DOID:0060842","OMIM:611038"],"synonyms":[{"name":"MCOP3","type":"exact"},{"name":"RAX isolated microphthalmia","type":"exact"},{"name":"isolated microphthalmia 3","type":"exact"},{"name":"isolated microphthalmia caused by mutation in RAX","type":"exact"},{"name":"isolated microphthalmia caused by mutation in rax","type":"exact"},{"name":"isolated microphthalmia type 3","type":"exact"},{"name":"microphthalmia, isolated 3","type":"related"},{"name":"microphthalmia, isolated type 3","type":"exact"},{"name":"rax isolated microphthalmia","type":"exact"}],"termid":"MONDO:0012604","xrefs":{"Monarch":{"xref_id":"0012604"}}}


id: MONDO:0014238
data:
  {"annotated_genes":["SJAG_05206"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85300],"is_not":false,"summary":null,"term":"MONDO:0014238"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05206":null},"genotype_count":0,"is_obsolete":false,"name":"severe intellectual disability-short stature-behavioral abnormalities-facial dysmorphism syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3809853","DOID:0081204","Orphanet:391307","MEDGEN:816183","GARD:17611","OMIM:615541"],"synonyms":[{"name":"MRT39","type":"related"},{"name":"intellectual disability, autosomal recessive 39","type":"related"},{"name":"intellectual disability, autosomal recessive type 39","type":"exact"},{"name":"mental retardation, autosomal recessive 39","type":"related"},{"name":"mental retardation, autosomal recessive type 39","type":"exact"}],"termid":"MONDO:0014238","terms_by_termid":{"MONDO:0014238":null},"xrefs":{"Monarch":{"xref_id":"0014238"}}}


id: GO:0060077
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse in which an action potential in the presynaptic cell reduces the probability of an action potential occurring in the postsynaptic cell.","definition_xrefs":["GOC:ef","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"inhibitory synapse","secondary_identifiers":["Wikipedia:Inhibitory_postsynaptic_potential"],"termid":"GO:0060077"}


id: PR:O74858
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lysine--tRNA ligase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04888","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.08","secondary_identifiers":["UniProtKB:O74858"],"synonyms":[{"name":"LysRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lysS","type":"exact"},{"name":"lysyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74858"}


id: MONDO:0015060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mosaic trisomy 3 is a rare chromosomal anomaly syndrome with high phenotypic variability ranging from a mild phenotype presenting joint pain and laxity, mild facial dysmorphism (e.g. long facies, prominent eyes, dysplastic ears, downturned corners of the mouth, micrognathia) and no developmental delays to more severe phenotypes including short stature, intellectual disability, severe developmental delays, additional craniofacial dysmorphic features (e.g. brachycephaly, high forehead, flat midface, short neck) and hearing impairment, as well as skeletal (e.g. pectus excavatum, scoliosis), ocular (e.g. coloboma) and cardiac abnormalities.","definition_xrefs":["Orphanet:100071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 3 disorder","termid":"MONDO:0700010"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy 3","secondary_identifiers":["GARD:5342","SCTID:764627005","MEDGEN:1646607","UMLS:C4707012"],"synonyms":[{"name":"Mosaic trisomy chromosome 3","type":"exact"},{"name":"Mosaic trisomy type 3","type":"exact"},{"name":"trisomy 3 mosaicism","type":"exact"}],"termid":"MONDO:0015060","xrefs":{"Monarch":{"xref_id":"0015060"}}}


id: PBO:0001900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase zeta catalytic subunit Rev3 (predicted)","termid":"PBO:0001900"}


id: PBO:0089994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex peripheral subunit Cog6","termid":"PBO:0089994"}


id: GO:0070816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group on to an amino acid residue in the C-terminal domain of RNA polymerase II. Typically, this occurs during the transcription cycle and results in production of an RNA polymerase II enzyme where the carboxy-terminal domain (CTD) of the largest subunit is extensively phosphorylated, often referred to as hyperphosphorylated or the II(0) form. Specific types of phosphorylation within the CTD are usually associated with specific regions of genes, though there are exceptions. The phosphorylation state regulates the association of specific complexes such as the capping enzyme or 3'-RNA processing machinery to the elongating RNA polymerase complex.","definition_xrefs":["GOC:krc","PMID:17079683","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphorylation of RNA polymerase II C-terminal domain (obsolete GO:0070816)","synonyms":[{"name":"CTD domain phosphorylation of RNA polymerase II","type":"exact"},{"name":"generation of II(0) form of RNA polymerase II","type":"exact"},{"name":"generation of hyperphosphorylated CTD of RNA polymerase II","type":"exact"},{"name":"hyperphosphorylation of RNA polymerase II C-terminal domain","type":"exact"}],"termid":"GO:0070816"}


id: PBO:0049442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 19","termid":"PBO:0049442"}


id: PBO:0034328
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ends","termid":"PBO:0034328"}


id: MONDO:0006511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete developmental dysplasia of the hip (obsolete MONDO:0006511)","termid":"MONDO:0006511","xrefs":{"Monarch":{"xref_id":"0006511"}}}


id: PBO:0004530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate O-acyltransferase (predicted)","termid":"PBO:0004530"}


id: PBO:0056720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meprin A subunit alpha pseudogene 2","termid":"PBO:0056720"}


id: MONDO:0001264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Kyasanur forest disease (obsolete MONDO:0001264)","termid":"MONDO:0001264","xrefs":{"Monarch":{"xref_id":"0001264"}}}


id: GO:0036475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any biological process that results in permanent cessation of all vital functions of a neuron upon exposure to an oxidative stress stimulus.","definition_xrefs":["GOC:bf","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete neuron death in response to oxidative stress (obsolete GO:0036475)","synonyms":[{"name":"neuronal cell death in response to oxidative stress","type":"exact"},{"name":"oxidative stress-induced neuron death","type":"exact"}],"termid":"GO:0036475"}


id: GO:1900790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pseurotin A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactam biosynthetic process","termid":"GO:0072339"},{"relation_name":"is_a","term_name":"pseurotin A metabolic process","termid":"GO:1900788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pseurotin A biosynthetic process","synonyms":[{"name":"Pseurotin anabolism","type":"related"},{"name":"Pseurotin biosynthesis","type":"related"},{"name":"Pseurotin biosynthetic process","type":"related"},{"name":"Pseurotin formation","type":"related"},{"name":"Pseurotin synthesis","type":"related"},{"name":"pseurotin A anabolism","type":"exact"},{"name":"pseurotin A biosynthesis","type":"exact"},{"name":"pseurotin A formation","type":"exact"},{"name":"pseurotin A synthesis","type":"exact"}],"termid":"GO:1900790"}


id: PATO:0000971
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000971 absolute permeability (obsolete PATO:0000971)","termid":"PATO:0000971"}


id: PBO:0076825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENT5C divergent transcript","termid":"PBO:0076825"}


id: FYPO:0004036
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of thioredoxin-disulfide reductase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal thioredoxin-disulfide reductase activity","termid":"FYPO:0004035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0000002","FYPO:0001985","FYPO:0000707","FYPO:0005447"],"is_obsolete":false,"name":"increased thioredoxin-disulfide reductase activity","termid":"FYPO:0004036"}


id: PATO:0000897
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000897 germ line dependent fertility value (obsolete PATO:0000897)","termid":"PATO:0000897"}


id: MONDO:0032677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly spectrum disorder with complex brainstem malformation","termid":"MONDO:0100472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly 9 with complex brainstem malformation","secondary_identifiers":["DOID:0112228","OMIM:618325","Orphanet:572013","GARD:18007","MEDGEN:1681109","UMLS:C5193029"],"synonyms":[{"name":"LIS9","type":"related"},{"name":"LISSENCEPHALY 9 WITH COMPLEX BRAINSTEM MALFORMATION","type":"related"}],"termid":"MONDO:0032677","xrefs":{"Monarch":{"xref_id":"0032677"}}}


id: MONDO:0014465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the CCDC151 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 30","secondary_identifiers":["DOID:0110624","GARD:16052","MEDGEN:863453","OMIM:616037","UMLS:C4015016"],"synonyms":[{"name":"CCDC151 primary ciliary dyskinesia","type":"exact"},{"name":"CILD30","type":"exact"},{"name":"ciliary dyskinesia, primary, 30","type":"related"},{"name":"ciliary dyskinesia, primary, 30, with or without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 30","type":"exact"},{"name":"primary ciliary dyskinesia 30 without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in CCDC151","type":"exact"},{"name":"primary ciliary dyskinesia type 30","type":"exact"}],"termid":"MONDO:0014465","xrefs":{"Monarch":{"xref_id":"0014465"}}}


id: PBO:0042376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD200R1 pseudogene 1","termid":"PBO:0042376"}


id: GO:0140603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + H+ Pi. ATP hydrolysis is used in some reactions as an energy source, for example to catalyze a reaction or drive transport against a concentration gradient.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete ATP hydrolysis activity (obsolete GO:0140603)","termid":"GO:0140603"}


id: MONDO:0021548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"total early-onset cataract","secondary_identifiers":["UMLS:C0266539","GARD:1159","MEDGEN:75616","Orphanet:98994"],"synonyms":[{"name":"CCT","type":"related"},{"name":"cataract, total congenital","type":"related"},{"name":"cataract, total congenital with posterior sutural opacities in heterozygotes","type":"related"}],"termid":"MONDO:0021548","xrefs":{"Monarch":{"xref_id":"0021548"}}}


id: GO:0001118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a transcription ternary complex, composed of RNA polymerase, template DNA, and an RNA transcript, into its constituent components.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA-RNA complex disassembly","termid":"GO:0001117"},{"relation_name":"part_of","term_name":"DNA-templated transcription termination","termid":"GO:0006353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"transcription ternary complex disassembly","synonyms":[{"name":"transcription protein-DNA-RNA complex disassembly","type":"exact"}],"termid":"GO:0001118"}


id: PBO:0060223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix remodeling associated 5","termid":"PBO:0060223"}


id: PBO:0059144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megakaryocyte and platelet inhibitory receptor G6b","termid":"PBO:0059144"}


id: MONDO:0850130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"gastroesophageal adenocarcinoma","secondary_identifiers":["DOID:0080375"],"termid":"MONDO:0850130","xrefs":{"Monarch":{"xref_id":"0850130"}}}


id: PBO:0075788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 9 pseudogene 1","termid":"PBO:0075788"}


id: PBO:0078051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 41","termid":"PBO:0078051"}


id: PR:O94428
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug168 gene.","definition_xrefs":["UniProtKB:O94428","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 168 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC660.09","synonyms":[{"name":"Spom972h-mug168","type":"exact"}],"termid":"PR:O94428"}


id: FYPO:0005769
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a greater extent than normal in regions containing G-quartet (G4) motifs. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PMID:27611590","PomBase:mah","PMID:25471935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at G4 motif during vegetative growth","synonyms":[{"name":"increased histone H2A phosphorylation at G-quadruplex during vegetative growth","type":"exact"},{"name":"increased histone H2A phosphorylation at G-quartet during vegetative growth","type":"exact"},{"name":"increased histone H2A phosphorylation at G4 motif during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005769"}


id: GO:0070024
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the cell surface signaling molecule CD19, the Ras guanine nucleotide exchange factor Vav, and the regulatory subunit alpha of phosphatidylinositol 3-kinase (PI3K).","definition_xrefs":["PMID:7528218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"CD19-Vav-PIK3R1 complex","synonyms":[{"name":"CD19-Vav-PI 3-kinase (p85 subunit) complex","type":"exact"}],"termid":"GO:0070024"}


id: PBO:0072461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 25","termid":"PBO:0072461"}


id: GO:2000373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA topoisomerase (ATP-hydrolyzing) activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ATP-dependent activity","termid":"GO:0032781"},{"relation_name":"is_a","term_name":"positive regulation of catalytic activity","termid":"GO:0043085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity","synonyms":[{"name":"positive regulation of DNA topoisomerase (ATP-hydrolysing)","type":"related"},{"name":"positive regulation of DNA topoisomerase II","type":"related"},{"name":"positive regulation of DNA topoisomerase IV activity","type":"exact"},{"name":"positive regulation of DNA topoisomerase type II activity","type":"exact"},{"name":"positive regulation of deoxyribonucleate topoisomerase","type":"related"},{"name":"positive regulation of deoxyribonucleic topoisomerase activity","type":"exact"},{"name":"positive regulation of topoisomerase","type":"related"},{"name":"positive regulation of topoisomerase II","type":"exact"},{"name":"positive regulation of type II DNA topoisomerase activity","type":"exact"}],"termid":"GO:2000373"}


id: PBO:0000292
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"no apparent orthologs, S. pombe variant","termid":"PBO:0000292"}


id: MONDO:0001631
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome which occurs as a result of the occlusion of one of the vertebral arteries. It may be caused by atherosclerosis, embolism or hemorrhage. Collateral circulation through the circle of Willis is usually comprised as well. Clinical signs may include vertigo, nystagmus, dysarthria, ataxia and sensorimotor deficits. Clinical course may lead to persistence of neurologic deficits. Prognosis is variable with a substantial risk for recurrent infarction.","definition_xrefs":["NCIT:C35123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"transient ischemic attack","termid":"MONDO:0005264"},{"relation_name":"is_a","term_name":"vascular insufficiency disorder","termid":"MONDO:0020674"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebral artery insufficiency","secondary_identifiers":["ICD9:435.1","DOID:13095","UMLS:C0042560","SCTID:34781003","MEDGEN:22638","MESH:D014715"],"synonyms":[{"name":"vertebral artery syndrome","type":"exact"}],"termid":"MONDO:0001631","xrefs":{"Monarch":{"xref_id":"0001631"}}}


id: GO:0036445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The self-renewing division of a neuronal stem cell.","definition_xrefs":["CL:0000047","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic stem cell division","termid":"GO:0048103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuronal stem cell division","synonyms":[{"name":"NSC division","type":"exact"}],"termid":"GO:0036445"}


id: FYPO:0006534
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell periphery does not occur when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell periphery","termid":"FYPO:0006533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to cell periphery during nitrogen starvation","synonyms":[{"name":"abolished protein localisation to cell periphery during nitrogen starvation","type":"exact"},{"name":"abolished protein localization to cell periphery during nitrogen depletion","type":"exact"},{"name":"abolished protein localization to cell periphery during nitrogen deprivation","type":"exact"},{"name":"protein absent from cell periphery during nitrogen starvation","type":"related"},{"name":"protein localization to cell periphery abolished during nitrogen starvation","type":"exact"}],"termid":"FYPO:0006534"}


id: PBO:0036221
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_arginase_activity","termid":"PBO:0036221"}


id: PBO:0046549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 3","termid":"PBO:0046549"}


id: PBO:0055267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2694","termid":"PBO:0055267"}


id: GO:2000615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-K9 acetylation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K9 acetylation (obsolete GO:2000615)","synonyms":[{"name":"regulation of histone H3 acetylation at K9","type":"exact"},{"name":"regulation of histone H3K9 acetylation","type":"exact"}],"termid":"GO:2000615"}


id: PBO:0066831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 130","termid":"PBO:0066831"}


id: GO:1901147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mesenchymal cell apoptotic process that is involved in metanephric nephron morphogenesis.","definition_xrefs":["GOC:mtg_apoptosis","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell apoptotic process involved in metanephros development","termid":"GO:1900200"},{"relation_name":"is_a","term_name":"mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:1901145"},{"relation_name":"part_of","term_name":"metanephric nephron morphogenesis","termid":"GO:0072273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis","termid":"GO:1901147"}


id: GO:1900591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving violaceol II.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"violaceol II metabolic process","synonyms":[{"name":"violaceol II metabolism","type":"exact"}],"termid":"GO:1900591"}


id: PBO:0012546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 4 (predicted)","termid":"PBO:0012546"}


id: MONDO:0054550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial avascular necrosis of femoral head","termid":"MONDO:0012126"},{"relation_name":"is_a","term_name":"dysplasia of the proximal femoral epiphyses","termid":"MONDO:1030002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"avascular necrosis of femoral head, primary, 1","secondary_identifiers":["OMIM:608805","UMLS:C4551562","MEDGEN:1639295"],"synonyms":[{"name":"ANFH1","type":"related"},{"name":"Femoral head, avascular necrosis of","type":"related"},{"name":"avascular necrosis of femoral head, primary, 1","type":"exact"},{"name":"avascular necrosis of the femoral head","type":"exact"},{"name":"femoral head, aseptic necrosis of","type":"related"},{"name":"ischaemic necrosis of femoral head","type":"related"},{"name":"ischemic necrosis of femoral head","type":"related"},{"name":"osteonecrosis of femoral head","type":"related"}],"termid":"MONDO:0054550","xrefs":{"Monarch":{"xref_id":"0054550"}}}


id: PBO:0052048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KN motif and ankyrin repeat domains 4","termid":"PBO:0052048"}


id: GO:0000231
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A chromosome found in the cytoplasm during mitosis.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic mitotic chromosome (obsolete GO:0000231)","synonyms":[{"name":"cytoplasmic mitotic chromosome","type":"exact"}],"termid":"GO:0000231"}


id: PBO:0002632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex subunit Cog1 (predicted)","termid":"PBO:0002632"}


id: MONDO:0019650
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic steroid-sensitive nephrotic syndrome","termid":"MONDO:0019067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"idiopathic steroid-sensitive nephrotic syndrome with minimal change","secondary_identifiers":["Orphanet:93207"],"synonyms":[{"name":"steroid-sensitive MCNS","type":"exact"}],"termid":"MONDO:0019650","xrefs":{"Monarch":{"xref_id":"0019650"}}}


id: MONDO:0026724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Paganini-Miozzo syndrome","secondary_identifiers":["OMIM:301025","UMLS:C5193010","DOID:0111843","MEDGEN:1683361"],"synonyms":[{"name":"MRXSPM","type":"related"},{"name":"PAGANINI-MIOZZO SYNDROME","type":"related"},{"name":"Paganini-Miozzo syndrome, X-linked recessive","type":"exact"},{"name":"mental retardation, X-Linked, syndromic, Paganini-Miozzo type","type":"exact"}],"termid":"MONDO:0026724","xrefs":{"Monarch":{"xref_id":"0026724"}}}


id: PBO:0048412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA binding protein 2","termid":"PBO:0048412"}


id: PBO:0068037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 342","termid":"PBO:0068037"}


id: MONDO:0013340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing young-onset Parkinson disease in which the cause of the disease is a mutation in the UCHL1 gene.","definition_xrefs":["MONDO:patterns/inherited_susceptibility","MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"young-onset Parkinson disease","termid":"MONDO:0017279"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Parkinson disease 5, autosomal dominant, susceptibility to","secondary_identifiers":["OMIM:613643","UMLS:C3150899","MEDGEN:462249"],"synonyms":[{"name":"PARK5","type":"related"},{"name":"Parkinson disease 5, autosomal dominant, susceptibility to","type":"exact"},{"name":"Parkinson disease 5, susceptibility to","type":"exact"},{"name":"UCHL1 young-onset Parkinson disease","type":"exact"},{"name":"susceptibility to autosomal dominant Parkinson disease 5","type":"related"},{"name":"young-onset Parkinson disease caused by mutation in UCHL1","type":"exact"}],"termid":"MONDO:0013340","xrefs":{"Monarch":{"xref_id":"0013340"}}}


id: PBO:0048086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 7","termid":"PBO:0048086"}


id: MONDO:0032797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy, congenital, with tremor","secondary_identifiers":["OMIM:618524","DOID:0081348","UMLS:C5231401","MEDGEN:1684886"],"synonyms":[{"name":"MYOPATHY, CONGENITAL, WITH TREMOR","type":"related"},{"name":"MYOTREM","type":"related"},{"name":"Myogenic Tremor","type":"related"}],"termid":"MONDO:0032797","xrefs":{"Monarch":{"xref_id":"0032797"}}}


id: PBO:0004207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexed with Cdc5 protein Cwf12","termid":"PBO:0004207"}


id: PBO:0063653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 10","termid":"PBO:0063653"}


id: PBO:0067964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 266","termid":"PBO:0067964"}


id: PBO:0091505
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-coding RNA Associated to Mmi1","termid":"PBO:0091505"}


id: MONDO:0014264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"otosclerosis","termid":"MONDO:0005349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otosclerosis 10","secondary_identifiers":["MEDGEN:854867","UMLS:C3888339","DOID:0060927","OMIM:615589"],"synonyms":[{"name":"OTSC10","type":"exact"},{"name":"otosclerosis 10","type":"exact"}],"termid":"MONDO:0014264","xrefs":{"Monarch":{"xref_id":"0014264"}}}


id: PBO:0091182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orf333","termid":"PBO:0091182"}


id: MOD:00943
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["PubMed:12643539","Unimod:476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-trimethylammoniumbutanoyl derivatized residue","synonyms":[{"name":"4-trimethyllammoniumbutyryl-","type":"related"},{"name":"TMAB","type":"related"}],"termid":"MOD:00943"}


id: PBO:0028402
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_respiratory_electron_transport","termid":"PBO:0028402"}


id: MONDO:0030847
data:
  {"annotated_genes":["SJAG_01665"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85185],"is_not":false,"summary":null,"term":"MONDO:0030847"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01665":null},"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis, distal, type 1C","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16421","DOID:0112190","MEDGEN:1722257","OMIM:619110","UMLS:C5436834"],"synonyms":[{"name":"DA1C","type":"exact"},{"name":"arthrogryposis, distal, type 1C","type":"exact"}],"termid":"MONDO:0030847","terms_by_termid":{"MONDO:0030847":null},"xrefs":{"Monarch":{"xref_id":"0030847"}}}


id: PBO:0051234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-33-1 (pseudogene)","termid":"PBO:0051234"}


id: GO:0102783
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: beta-carotene + 2 O2 = 2 beta-ionone + 4,9-dimethyldodeca-2,4,6,8,10-pentaenedial.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-carotene oxygenase activity (obsolete GO:0102783)","termid":"GO:0102783"}


id: GO:1903852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cristae formation.","definition_xrefs":["GO_REF:0000058","GOC:pad","GOC:PARL","PMID:19279012","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of cristae formation","termid":"GO:1903850"},{"relation_name":"positively_regulates","term_name":"cristae formation","termid":"GO:0042407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0007005"},{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0007005"],"is_obsolete":false,"name":"positive regulation of cristae formation","synonyms":[{"name":"activation of cristae formation","type":"narrow"},{"name":"up regulation of cristae formation","type":"exact"},{"name":"up-regulation of cristae formation","type":"exact"},{"name":"upregulation of cristae formation","type":"exact"}],"termid":"GO:1903852"}


id: GO:1901764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phosphinothricin.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phosphinothricin metabolic process","synonyms":[{"name":"phosphinothricin metabolism","type":"exact"}],"termid":"GO:1901764"}


id: PBO:0050847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"islet cell autoantigen 1 like","termid":"PBO:0050847"}


id: PBO:0046936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 53 member B","termid":"PBO:0046936"}


id: PBO:0027974
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cysteine-type_peptidase_activity","termid":"PBO:0027974"}


id: GO:1901333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lateral root development.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of post-embryonic development","termid":"GO:0048582"},{"relation_name":"is_a","term_name":"regulation of lateral root development","termid":"GO:2000023"},{"relation_name":"positively_regulates","term_name":"lateral root development","termid":"GO:0048527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lateral root development","synonyms":[{"name":"activation of lateral root development","type":"narrow"},{"name":"up regulation of lateral root development","type":"exact"},{"name":"up-regulation of lateral root development","type":"exact"},{"name":"upregulation of lateral root development","type":"exact"}],"termid":"GO:1901333"}


id: PBO:0043342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride nucleotide-sensitive channel 1A pseudogene 1","termid":"PBO:0043342"}


id: FYPO:0004522
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is elongated and branched (and septated) and is curved along the long axis, and undergoes one or two rounds of cell division and then dies.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, single or double cell division, branched, elongated cell","termid":"FYPO:0004521"},{"relation_name":"is_a","term_name":"inviable after spore germination, single or double cell division, curved, elongated cell","termid":"FYPO:0004523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000004","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, single or double cell division, branched, curved, elongated cell","synonyms":[{"name":"inviable after spore germination, single or double cell division, elongated, curved and branched cell","type":"exact"},{"name":"inviable following spore germination, single or double cell division, branched, curved, elongated cell","type":"exact"},{"name":"inviable germinated spore, single or double cell division, branched, curved, elongated cell","type":"exact"},{"name":"lethal after spore germination, single or double cell division, branched, curved, elongated cell","type":"exact"}],"termid":"FYPO:0004522"}


id: PBO:0087870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional co-activator that regulates mating-type-specific genes; targets the transcription factor Mcm1p to the promoters of alpha-specific genes; one of two genes encoded by the MATalpha mating type cassette","termid":"PBO:0087870"}


id: PBO:0049147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione peroxidase 4","termid":"PBO:0049147"}


id: GO:0006802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The processes involved in the induction or activation of catalase, an enzyme that catalyzes the conversion of H2O2 into H2O.","definition_xrefs":["GOC:jl","PMID:11245904"],"gene_count":0,"genotype_count":0,"name":"obsolete catalase reaction (obsolete GO:0006802)","synonyms":[{"name":"catalase reaction","type":"exact"},{"name":"hydroperoxidase reaction","type":"related"}],"termid":"GO:0006802"}


id: PBO:0003919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type m-specific polypeptide mc 1","termid":"PBO:0003919"}


id: PBO:0084221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp40 chaperone with a role in SUMO-mediated protein degradation; works in concert with Hsp70 and Hsp110 (Sse1p) to promote disaggregation of intranuclear protein inclusions; competes with Hsp104 in disaggregation, supporting turnover instead of refolding; member of DnaJ-like family, conserved across eukaryotes; overexpression interferes with propagation of the [Psi+] prion; forms nuclear foci upon DNA replication stress","termid":"PBO:0084221"}


id: GO:0044473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant stopping, prevention or reduction of the activity of a calcium channel in the bitten organism.","definition_xrefs":["PMID:20920515","GOC:jl","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of calcium channel activity in another organism","termid":"GO:0044472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in negative regulation of calcium channel activity in another organism","synonyms":[{"name":"envenomation resulting in negative regulation of calcium channel activity in other organism","type":"exact"}],"termid":"GO:0044473"}


id: MONDO:0007153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arteries, anomalies of","secondary_identifiers":["OMIM:108000","MEDGEN:360295","UMLS:C1876179"],"synonyms":[{"name":"arteries, anomalies of","type":"exact"}],"termid":"MONDO:0007153","xrefs":{"Monarch":{"xref_id":"0007153"}}}


id: GO:0038065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by collagen binding to a cell surface receptor, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:bf","GOC:uh","PMID:21568710"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"collagen-activated signaling pathway","synonyms":[{"name":"collagen-activated signalling pathway","type":"exact"}],"termid":"GO:0038065"}


id: PBO:0062560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily A member 7","termid":"PBO:0062560"}


id: GO:0019572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-arabinose, the L-enantiomer of arabino-pentose.","definition_xrefs":["GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabinose catabolic process","termid":"GO:0019568"},{"relation_name":"is_a","term_name":"L-arabinose metabolic process","termid":"GO:0046373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"L-arabinose catabolic process","synonyms":[{"name":"L-arabinose breakdown","type":"exact"},{"name":"L-arabinose catabolism","type":"exact"},{"name":"L-arabinose degradation","type":"exact"}],"termid":"GO:0019572"}


id: GO:0160171
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=28 symmetry.","definition_xrefs":["VZ:6057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=28 icosahedral capsid","termid":"GO:0160171"}


id: PBO:0028515
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_hydrogen_peroxide_catabolism","termid":"PBO:0028515"}


id: MONDO:0019000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Perineural (or Tarlov) cysts are cerebrospinal fluid-filled nerve root cysts most commonly found at the sacral level of the spine, although they can be found in any section of the spine, which can cause progressively painful radiculopathy.","definition_xrefs":["Orphanet:65250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perineural cyst","secondary_identifiers":["GARD:9258","MEDGEN:105457","SCTID:81634008","MESH:D052958","icd11.foundation:881909739","UMLS:C0520720"],"synonyms":[{"name":"Tarlov cyst","type":"exact"},{"name":"Tarlov cysts","type":"related"},{"name":"perineural cysts","type":"related"},{"name":"sacral Tarlov cysts","type":"related"},{"name":"sacral neural cysts","type":"related"},{"name":"sacral perineural cysts","type":"related"}],"termid":"MONDO:0019000","xrefs":{"Monarch":{"xref_id":"0019000"}}}


id: PBO:0044284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome X open reading frame 38","termid":"PBO:0044284"}


id: PBO:0038555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 17B, depalmitoylase","termid":"PBO:0038555"}


id: GO:0072674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized monocyte acquires the specialized features of a multinuclear osteoclast. An osteoclast is a specialized phagocytic cell associated with the absorption and removal of the mineralized matrix of bone tissue.","definition_xrefs":["CL:0000779","GOC:mah","PMID:12713016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteoclast differentiation","termid":"GO:0030316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multinuclear osteoclast differentiation","synonyms":[{"name":"multinuclear osteoclast formation","type":"related"},{"name":"multinuclear osteoclast morphogenesis","type":"related"}],"termid":"GO:0072674"}


id: GO:0008923
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine + H+ = cadaverine + CO2.","definition_xrefs":["RHEA:22352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"lysine decarboxylase activity","secondary_identifiers":["EC:4.1.1.18","MetaCyc:LYSDECARBOX-RXN","KEGG_REACTION:R00462"],"synonyms":[{"name":"L-lysine carboxy-lyase activity","type":"related"}],"termid":"GO:0008923"}


id: GO:0021799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of cells in the developing cerebral cortex in which cells move from the ventricular and/or subventricular zone toward the surface of the brain.","definition_xrefs":["GOC:jid","PMID:12626695","GOC:dgh","GO_REF:0000021","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral cortex cell migration","termid":"GO:0021795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex radially oriented cell migration","termid":"GO:0021799"}


id: GO:0102725
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + 24-methyldesmosterol + NADPH = campesterol + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 24-methyldesmosterol reductase activity (obsolete GO:0102725)","termid":"GO:0102725"}


id: GO:0021580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the medulla oblongata. This process pertains to the initial formation of a structure from unspecified parts. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate.","definition_xrefs":["ISBN:0838580343","GOC:dph","GOC:jid","GOC:cls","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"hindbrain formation","termid":"GO:0021576"},{"relation_name":"part_of","term_name":"medulla oblongata morphogenesis","termid":"GO:0021579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"medulla oblongata formation","synonyms":[{"name":"medulla biosynthesis","type":"related"},{"name":"medulla formation","type":"related"},{"name":"myelencephalon biosynthesis","type":"related"},{"name":"myelencephalon formation","type":"related"}],"termid":"GO:0021580"}


id: GO:0052738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a quinone or similar compound.","definition_xrefs":["EC:1.2.5.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, with a quinone or similar compound as acceptor","termid":"GO:0052738"}


id: PBO:0108672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK/PAR-1 kinase Kin1","termid":"PBO:0108672"}


id: GO:0045007
data:
  {"annotated_genes":["SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94349],"is_not":false,"summary":null,"term":"GO:0045007"}]},"cv_name":"biological_process","definition":"The disruption of the bond between the sugar in the backbone and the A or G base, causing the base to be removed and leaving a depurinated sugar.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base-excision repair, AP site formation","termid":"GO:0006285"},{"relation_name":"is_a","term_name":"DNA modification","termid":"GO:0006304"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"depurination","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-73927","Wikipedia:Depurination"],"termid":"GO:0045007","terms_by_termid":{"GO:0045007":null}}


id: PBO:0043113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHURC1-FNTB readthrough","termid":"PBO:0043113"}


id: MOD:01909
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a residue to the 6x(13)C labeled 4-sulfophenyl isothiocyanate adduct, alpha-amino-[(4-sulfophenyl)carbamothioyl] residue.","definition_xrefs":["Unimod:464#N-term","PubMed:11467524","PubMed:16526082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"6x(13)C labeled 4-sulfophenyl isothiocyanate derivatized residue","termid":"MOD:00880"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C labeled 4-sulfophenyl isothiocyanate alpha-amino derivatized residue","synonyms":[{"name":"4-sulfophenyl isothiocyanate (Heavy C13)","type":"related"},{"name":"SPITC:13C(6)","type":"related"}],"termid":"MOD:01909"}


id: PBO:0074432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 32","termid":"PBO:0074432"}


id: MONDO:0022960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermatocardioskeletal syndrome boronne type","termid":"MONDO:0022960","xrefs":{"Monarch":{"xref_id":"0022960"}}}


id: PBO:0036194
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_spindle_elongation_without_chromosome_separation","termid":"PBO:0036194"}


id: PBO:0064380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 2","termid":"PBO:0064380"}


id: GO:0001653
data:
  {"annotated_genes":["SJAG_01345","SJAG_01978"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004932"},{"annotations":[87619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036320"}]},"cv_name":"molecular_function","definition":"Combining with an extracellular or intracellular peptide to initiate a change in cell activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01345":null,"SJAG_01978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"peptide receptor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"endogenous peptide receptor activity","type":"narrow"},{"name":"exogenous peptide receptor activity","type":"narrow"}],"termid":"GO:0001653","terms_by_termid":{"GO:0004932":null,"GO:0036320":null}}


id: PBO:0046645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 26","termid":"PBO:0046645"}


id: MONDO:0100456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized onset at birth of profound encephalopathy with hypotonia, Respiratory insufficiency central hypoventilation, a persistent suppression burst pattern of EEG background, and recurrent bouts of myoclonus that are not accompanied by epileptic discharges on electroencephalography. Evolution to pharmacoresistant seizures is common and continued profound global developmental delay.","direct_ancestors":[{"relation_name":"is_a","term_name":"complex neurodevelopmental disorder","termid":"MONDO:0100038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neonatal encephalopathy with non-epileptic myoclonus","termid":"MONDO:0100456","xrefs":{"Monarch":{"xref_id":"0100456"}}}


id: PBO:0059149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGUK p55 scaffold protein 1","termid":"PBO:0059149"}


id: PBO:0042101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 172","termid":"PBO:0042101"}


id: PBO:0058817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7974","termid":"PBO:0058817"}


id: MONDO:1012484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hoof wall separation syndrome, non-human animal","termid":"MONDO:1011772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hoof wall separation syndrome, horse","secondary_identifiers":["OMIA:001897-9796"],"termid":"MONDO:1012484","xrefs":{"Monarch":{"xref_id":"1012484"}}}


id: PBO:0072021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S8 pseudogene 8","termid":"PBO:0072021"}


id: FYPO:0003755
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype that shows detectable differences from normal at the level of an individual cell, when the cell is in the vegetative growth phase of the cell cycle. In fission yeast, the characteristics of wild type cells of the sequenced strain (972 h-) or the isogenic h+ or h90 strains are regarded as normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"inheres_in","term_name":"vegetative cell phenotype","termid":"FYPO:0001320"},{"relation_name":"is_a","term_name":"vegetative cell phenotype","termid":"FYPO:0001320"},{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal vegetative cell phenotype","synonyms":[{"name":"abnormal cell phenotype during vegetative growth","type":"exact"},{"name":"abnormal vegetative cell phenotype during mitotic cell cycle","type":"related"},{"name":"abnormal vegetative fission yeast cell phenotype","type":"exact"}],"termid":"FYPO:0003755"}


id: GO:0120519
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + N-terminal L-methionyl-[tubulin] = CoA + H+ + N-terminal N(alpha)-acetyl-L-methionyl-[tubulin]. The N-terminus of both alpha- and beta-tubulin are acetylated.","definition_xrefs":["EC:2.3.1.308","RHEA:69607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide alpha-N-acetyltransferase activity","termid":"GO:0004596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674","GO:0034212"],"is_obsolete":false,"name":"tubulin N-terminal N-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R12978","MetaCyc:RXN-22633"],"termid":"GO:0120519"}


id: MONDO:0018265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare disorder with dystonia and other neurologic or systemic manifestation (obsolete MONDO:0018265)","secondary_identifiers":["Orphanet:370106"],"termid":"MONDO:0018265","xrefs":{"Monarch":{"xref_id":"0018265"}}}


id: PR:O43032
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A signal recognition particle receptor subunit alpha that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11564:SF8","PRO:DNx","OMA:SCHPO03939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle receptor subunit alpha homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.03","secondary_identifiers":["UniProtKB:O43032"],"synonyms":[{"name":"DP-alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SR-alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SRPR","type":"exact"},{"name":"docking protein alpha (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43032"}


id: GO:0071487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a low light intensity stimulus. Low light intensity is defined as a level of electromagnetic radiation at or below 0.1 micromols/m2.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to low light intensity stimulus","termid":"GO:0009645"},{"relation_name":"is_a","term_name":"cellular response to light intensity","termid":"GO:0071484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to low light intensity stimulus","termid":"GO:0071487"}


id: GO:1902518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cyclophosphamide stimulus.","definition_xrefs":["GOC:TermGenie","PMID:23648065","GOC:dw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cyclophosphamide","termid":"GO:1902518"}


id: PBO:0007964
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yeast Phosphatase Activator","termid":"PBO:0007964"}


id: PBO:0082025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger ZZ-type and EF-hand domain containing 1","termid":"PBO:0082025"}


id: GO:0047248
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nuatigenin + UDP-D-glucose = H+ + nuatigenin 3-beta-D-glucopyranoside + UDP.","definition_xrefs":["RHEA:19329","EC:2.4.1.192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"nuatigenin 3-beta-glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.192-RXN","KEGG_REACTION:R04577"],"synonyms":[{"name":"UDP-glucose:(20S,22S,25S)-22,25-epoxyfurost-5-ene-3beta,26-diol 3-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:(20S,22S,25S)-22,25-epoxyfurost-5-ene-3beta,26-diol 3-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"nuatigenin 3beta-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-nuatigenin glucosyltransferase activity","type":"related"}],"termid":"GO:0047248"}


id: PBO:0007356
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA trimethylguanosine capped","termid":"PBO:0007356"}


id: MONDO:0018040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immunodeficiency with severe reduction in serum IgG and IgA with normal/elevated IgM and normal number of B-cells (obsolete MONDO:0018040)","secondary_identifiers":["Orphanet:331240","icd11.foundation:769068598"],"termid":"MONDO:0018040","xrefs":{"Monarch":{"xref_id":"0018040"}}}


id: FYPO:0006638
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortex of a cell is decreased, and the protein is instead detected distributed throughout the cell cortex. There may be little or no protein detected at the medial cortex.","definition_xrefs":["PMID:29930085","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to medial cortex during vegetative growth","termid":"FYPO:0002557"},{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortex, with protein distributed in cell cortex, during vegetative growth","termid":"FYPO:0007405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to medial cortex, with protein distributed in cell cortex, during vegetative growth","synonyms":[{"name":"abolished protein localization to medial cortex, with protein distributed in cortex, during vegetative growth","type":"narrow"},{"name":"decreased protein localisation to medial cortex, with protein distributed in cell cortex, during vegetative growth","type":"exact"},{"name":"decreased protein localization to medial cortex during vegetative growth, with protein distributed in cell cortex","type":"exact"},{"name":"decreased protein localization to medial cortex, with protein distributed in cell cortex, during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to medial ring, with protein distributed in cell cortex, during vegetative growth","type":"exact"},{"name":"reduced protein localization to medial cortex, with protein distributed in cell cortex, during vegetative growth","type":"exact"}],"termid":"FYPO:0006638"}


id: PBO:0066739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 36","termid":"PBO:0066739"}


id: PBO:0030741
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-tapered_cell_during_nitrogen_starvation","termid":"PBO:0030741"}


id: GO:1990961
data:
  {"annotated_genes":["SJAG_03951","SJAG_03363","SJAG_01145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95978,116517,117452],"is_not":false,"summary":null,"term":"GO:1990961"}]},"cv_name":"biological_process","definition":"A process that reduces or removes the toxicity of a xenobiotic by exporting it outside the cell.","definition_xrefs":["PMID:28355133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic export from cell","termid":"GO:0046618"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"},{"relation_name":"part_of","term_name":"detoxification","termid":"GO:0098754"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01145":null,"SJAG_03363":null,"SJAG_03951":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0098754","GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"xenobiotic detoxification by transmembrane export across the plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"drug transmembrane export","type":"narrow"}],"termid":"GO:1990961","terms_by_termid":{"GO:1990961":null}}


id: MONDO:0002464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the lacrimal gland.","direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal system cancer","termid":"MONDO:0002460"},{"relation_name":"is_a","term_name":"lacrimal gland neoplasm","termid":"MONDO:0021222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"lacrimal gland cancer","secondary_identifiers":["UMLS:C0153627","ICD9:190.2","ICD9:239.89","MEDGEN:56315","NCIT:C3563","DOID:294","SCTID:127004000"],"synonyms":[{"name":"cancer of lacrimal gland","type":"exact"},{"name":"lacrimal gland cancer","type":"exact"},{"name":"malignant lacrimal gland neoplasm","type":"exact"},{"name":"malignant lacrimal gland tumor","type":"exact"},{"name":"malignant lacrimal gland tumour","type":"exact"},{"name":"malignant neoplasm of lacrimal gland","type":"exact"},{"name":"malignant neoplasm of the lacrimal gland","type":"exact"},{"name":"malignant tumor of lacrimal gland","type":"exact"},{"name":"malignant tumor of the lacrimal gland","type":"exact"},{"name":"malignant tumour of lacrimal gland","type":"exact"},{"name":"malignant tumour of the lacrimal gland","type":"exact"},{"name":"tumor of the lacrimal gland","type":"broad"},{"name":"tumour of the lacrimal gland","type":"broad"}],"termid":"MONDO:0002464","xrefs":{"Monarch":{"xref_id":"0002464"}}}


id: PBO:0062284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily K member 1","termid":"PBO:0062284"}


id: PBO:0069634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 911, pseudogene","termid":"PBO:0069634"}


id: MONDO:0005794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Virus diseases caused by the herpesviridae.","definition_xrefs":["MESH:D006566"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Herpesviridae infectious disease","secondary_identifiers":["EFO:0007309","SCTID:23513009"],"synonyms":[{"name":"Herpesviridae caused disease or disorder","type":"exact"},{"name":"Herpesviridae disease or disorder","type":"exact"},{"name":"Herpesviridae infection","type":"related"},{"name":"Herpesviridae infections","type":"exact"},{"name":"Herpesvirus infection","type":"related"},{"name":"Herpesvirus infections","type":"related"},{"name":"herpes infection","type":"related"},{"name":"herpesvirus infection","type":"exact"},{"name":"infection, Herpesviridae","type":"related"},{"name":"infection, Herpesvirus","type":"related"},{"name":"infections, Herpesviridae","type":"related"},{"name":"infections, Herpesvirus","type":"related"}],"termid":"MONDO:0005794","xrefs":{"Monarch":{"xref_id":"0005794"}}}


id: GO:0090713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process of the immune system that can contribute to the formation of immunological memory or an immune response based upon activation of immunological memory.","definition_xrefs":["GOC:add","PMID:26086132","PMID:26831526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"part_of","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immunological memory process","termid":"GO:0090713"}


id: GO:0050156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-ornithine + 2 benzoyl-CoA = N(2),N(5)-dibenzoyl-L-ornithine + 2 CoA + 2 H+.","definition_xrefs":["RHEA:16929","EC:2.3.1.127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"ornithine N-benzoyltransferase activity","secondary_identifiers":["KEGG_REACTION:R00664","MetaCyc:ORNITHINE-N-BENZOYLTRANSFERASE-RXN"],"synonyms":[{"name":"benzoyl-CoA:L-ornithine N-benzoyltransferase activity","type":"related"},{"name":"ornithine N-acyltransferase activity","type":"related"}],"termid":"GO:0050156"}


id: FYPO:0001147
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which the observed mating efficiency, as determined by counting zygotes, asci, and sometimes spores, is normal (i.e. the same as in wild-type cells).","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal mating efficiency","termid":"FYPO:0001147"}


id: MONDO:0024304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most common form of ichthyosis. It is an autosomal dominant inherited or acquired disorder characterized by scaling and desquamation of the skin.","definition_xrefs":["NCIT:C84778"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ichthyosis","termid":"MONDO:0019269"},{"relation_name":"is_a","term_name":"inherited ichthyosis","termid":"MONDO:0015947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ichthyosis vulgaris","secondary_identifiers":["icd11.foundation:841161884","MEDGEN:38217","MESH:D016112","UMLS:C0079584","GARD:6752"],"synonyms":[{"name":"common ichthyosis","type":"related"},{"name":"fish scale disease","type":"related"},{"name":"ichthyosis vulgaris","type":"exact"}],"termid":"MONDO:0024304","xrefs":{"Monarch":{"xref_id":"0024304"}}}


id: PBO:0063082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-phosphoadenosine 5'-phosphosulfate synthase 1","termid":"PBO:0063082"}


id: GO:0032716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-7 production.","definition_xrefs":["GOC:mah","PMID:25962782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-7 production","termid":"GO:0032676"},{"relation_name":"negatively_regulates","term_name":"interleukin-7 production","termid":"GO:0032636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-7 production","secondary_identifiers":["GO:0045412","GO:0150113"],"synonyms":[{"name":"down regulation of interleukin-7 production","type":"exact"},{"name":"down-regulation of interleukin-7 production","type":"exact"},{"name":"downregulation of interleukin-7 production","type":"exact"},{"name":"inhibition of interleukin-7 production","type":"narrow"},{"name":"negative regulation of IL-7 production","type":"exact"},{"name":"negative regulation of interleukin-7 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-7 secretion","type":"narrow"}],"termid":"GO:0032716"}


id: PBO:0039677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 5 subunit sigma 1","termid":"PBO:0039677"}


id: MONDO:0011521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 1p36.","definition_xrefs":["DOID:0110882","PMID:19122664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"inflammatory bowel disease 7","secondary_identifiers":["UMLS:C1854573","MESH:C565353","MEDGEN:381452","OMIM:605225"],"synonyms":[{"name":"IBD7","type":"exact"},{"name":"inflammatory bowel disease 7","type":"exact"},{"name":"inflammatory bowel disease type 7","type":"exact"}],"termid":"MONDO:0011521","xrefs":{"Monarch":{"xref_id":"0011521"}}}


id: GO:0039635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont stops, prevents, or reduces the frequency, rate or extent of peptidoglycan biosynthesis in the host organism. Peptidoglycans are any of a class of glycoconjugates found in bacterial cell walls, and phages have mechanisms to disrupt their host's cell walls.","definition_xrefs":["GOC:bm","GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host peptidoglycan biosynthetic process","synonyms":[{"name":"suppression by virus of host peptidoglycan biosynthetic process","type":"narrow"},{"name":"viral inhibition of host peptidoglycan biosynthesis","type":"related"}],"termid":"GO:0039635"}


id: GO:0047495
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a glycerophospho group from one membrane-derived oligosaccharide to another.","definition_xrefs":["EC:2.7.8.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016780","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"membrane-oligosaccharide glycerophosphotransferase activity","secondary_identifiers":["MetaCyc:PGLYCEROLTRANSII-RXN"],"synonyms":[{"name":"membrane-derived-oligosaccharide-6-(glycerophospho)-D-glucose:membrane-derived-oligosaccharide-D-glucose glycerophosphotransferase activity","type":"related"},{"name":"periplasmic phosphoglycerotransferase activity","type":"narrow"},{"name":"phosphoglycerol cyclase activity","type":"related"}],"termid":"GO:0047495"}


id: PBO:0068721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 10, pseudogene","termid":"PBO:0068721"}


id: MONDO:0014359
data:
  {"annotated_genes":["SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85911],"is_not":false,"summary":null,"term":"MONDO:0014359"}]},"cv_name":"mondo","definition":"Any primary pigmented nodular adrenocortical disease in which the cause of the disease is a mutation in the PRKACA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary pigmented nodular adrenocortical disease","termid":"MONDO:0015999"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04312":null},"genotype_count":0,"is_obsolete":false,"name":"pigmented nodular adrenocortical disease, primary, 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4014425","GARD:16016","MEDGEN:862862","DOID:0070549","OMIM:615830"],"synonyms":[{"name":"ACTH-independent adrenal Cushing syndrome, somatic","type":"related"},{"name":"Cushing syndrome, ACTH-independent adrenal, somatic","type":"exact"},{"name":"Cushing syndrome, adrenal, due to Ppnad4","type":"related"},{"name":"PPNAD4","type":"related"},{"name":"PRKACA primary pigmented nodular adrenocortical disease","type":"exact"},{"name":"chromosome 19P13 Duplication syndrome","type":"related"},{"name":"pigmented nodular adrenocortical disease, primary, 4","type":"exact"},{"name":"pigmented nodular adrenocortical disease, primary, type 4","type":"exact"},{"name":"primary pigmented nodular adrenocortical disease caused by mutation in PRKACA","type":"exact"}],"termid":"MONDO:0014359","terms_by_termid":{"MONDO:0014359":null},"xrefs":{"Monarch":{"xref_id":"0014359"}}}


id: GO:0071572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the removal of an acetyl group from lysine at position 56 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K56 deacetylation (obsolete GO:0071572)","termid":"GO:0071572"}


id: MONDO:0000717
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acrofrontofacionasal dysostosis (obsolete MONDO:0000717)","termid":"MONDO:0000717","xrefs":{"Monarch":{"xref_id":"0000717"}}}


id: PBO:0080503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wound and keratinocyte migration associated lncRNA 2","termid":"PBO:0080503"}


id: MONDO:1012458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemangiosarcoma, non-human animal","termid":"MONDO:1011823"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemangiosarcoma, orange-winged Amazon parrot","secondary_identifiers":["OMIA:001813-151758"],"termid":"MONDO:1012458","xrefs":{"Monarch":{"xref_id":"1012458"}}}


id: PBO:0051321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR22-1 (pseudogene)","termid":"PBO:0051321"}


id: PBO:0069123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 373, pseudogene","termid":"PBO:0069123"}


id: GO:0030985
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a kininogen of high molecular mass.","definition_xrefs":["PMID:9520414","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kininogen binding","termid":"GO:0030984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"high molecular weight kininogen binding","synonyms":[{"name":"HK binding","type":"exact"},{"name":"HMW kininogen binding","type":"exact"}],"termid":"GO:0030985"}


id: PBO:0083399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ORF ULP2/YIL031W","termid":"PBO:0083399"}


id: GO:0055071
data:
  {"annotated_genes":["SJAG_01007","SJAG_04867"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94811,103295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030026"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of manganese ions within an organism or cell.","definition_xrefs":["GOC:jid","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation homeostasis","termid":"GO:0055080"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01007":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"manganese ion homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"manganese homeostasis","type":"broad"}],"termid":"GO:0055071","terms_by_termid":{"GO:0030026":null}}


id: GO:0008340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pathways that regulate the duration of the adult phase of the life-cycle of an animal.","definition_xrefs":["PMID:273723695","PMID:25561524","PMID:3424805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of adult lifespan","termid":"GO:0008340"}


id: MONDO:0003207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete eccrine adenocarcinoma (obsolete MONDO:0003207)","termid":"MONDO:0003207","xrefs":{"Monarch":{"xref_id":"0003207"}}}


id: GO:0006187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dGTP, deoxyguanosine triphosphate (2'-deoxyguanosine 5'-triphosphate) from other compounds, including gGDP, deoxyguanosine diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dGDP metabolic process","termid":"GO:0046066"},{"relation_name":"is_a","term_name":"dGTP biosynthetic process","termid":"GO:0046071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dGTP biosynthetic process from dGDP","synonyms":[{"name":"dGTP anabolism from dGDP","type":"exact"},{"name":"dGTP formation from dGDP","type":"exact"},{"name":"dGTP synthesis from dGDP","type":"exact"}],"termid":"GO:0006187"}


id: PBO:0048266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 4","termid":"PBO:0048266"}


id: GO:0046300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2,4-dichlorophenoxyacetic acid, a chlorinated phenoxy compound which functions as a systemic herbicide and is used to control many types of broadleaf weeds.","definition_xrefs":["UM-BBD_pathwayID:2,4-d","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2,4-dichlorophenoxyacetic acid metabolic process","termid":"GO:0018901"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"2,4-dichlorophenoxyacetic acid catabolic process","secondary_identifiers":["UM-BBD_pathwayID:2\\,4-d"],"synonyms":[{"name":"2,4-dichlorophenoxyacetic acid breakdown","type":"exact"},{"name":"2,4-dichlorophenoxyacetic acid catabolism","type":"exact"},{"name":"2,4-dichlorophenoxyacetic acid degradation","type":"exact"}],"termid":"GO:0046300"}


id: GO:0021517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ventral region of the spinal cord over time, from its formation to the mature structure. The neurons of the ventral region of the mature spinal cord participate in motor output.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:cls","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"spinal cord development","termid":"GO:0021510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral spinal cord development","termid":"GO:0021517"}


id: FYPO:0007201
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actin cortical patch localization to the site of cell division is decreased.","definition_xrefs":["PMID:30201262","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rate of actin cortical patch localization","termid":"FYPO:0006176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0004803","FYPO:0005447"],"is_obsolete":false,"name":"decreased rate of actin cortical patch localization to cell division site","synonyms":[{"name":"decreased rate of actin cortical patch localisation to cell division site","type":"exact"},{"name":"decreased rate of actin cortical patch localization to cell division site during mitotic cell cycle","type":"related"},{"name":"decreased rate of actin cortical patch localization to cell division site during vegetative growth","type":"exact"},{"name":"decreased rate of actin cortical patch movement to cell division site","type":"related"},{"name":"decreased rate of actin patch localization to cell division site","type":"exact"},{"name":"reduced rate of actin cortical patch localization to cell division site","type":"exact"}],"termid":"FYPO:0007201"}


id: MONDO:0002796
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant embryonal neoplasm characterized by the presence of small cells which resemble the cells of classic medulloblastoma and a minor population of melanin-forming neuroepithelial cells. It usually has an unfavorable clinical course.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medulloblastoma","termid":"MONDO:0007959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanotic medulloblastoma","secondary_identifiers":["MEDGEN:224818","ONCOTREE:MMBL","DOID:3868","NCIT:C9497","UMLS:C1275668"],"synonyms":[{"name":"MMBL","type":"related"},{"name":"medulloblastoma with melanotic differentiation","type":"exact"},{"name":"medulloblastoma, melanotic","type":"exact"},{"name":"medulloblastoma, melanotic (morphologic abnormality)","type":"exact"},{"name":"melanocytic medulloblastoma","type":"exact"},{"name":"melanotic medulloblastoma","type":"exact"}],"termid":"MONDO:0002796","xrefs":{"Monarch":{"xref_id":"0002796"}}}


id: PBO:0068740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5B small nuclear 3, pseudogene","termid":"PBO:0068740"}


id: PBO:0017413
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-precedes","termid":"PBO:0017413"}


id: MONDO:0001814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete patent ductus arteriosus (obsolete MONDO:0001814)","termid":"MONDO:0001814","xrefs":{"Monarch":{"xref_id":"0001814"}}}


id: PBO:0050876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma","termid":"PBO:0050876"}


id: PBO:0035983
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_phosphorylation_during_vegetative_growth","termid":"PBO:0035983"}


id: PBO:0040088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase family member H","termid":"PBO:0040088"}


id: MONDO:0021097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign papillary neoplasm that arises anywhere in the ductal system of the breast. It is characterized by fibrovascular structures lined by benign epithelial and myoepithelial proliferations. Intraductal breast papillomas are classified as central, when they arise in large ducts, or peripheral, when they arise in the terminal ductal lobular units.","definition_xrefs":["NCIT:C3863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast benign neoplasm","termid":"MONDO:0000620"},{"relation_name":"is_a","term_name":"integumentary system benign neoplasm","termid":"MONDO:0000652"},{"relation_name":"is_a","term_name":"intraductal papilloma","termid":"MONDO:0002060"},{"relation_name":"is_a","term_name":"intraductal papillary breast neoplasm","termid":"MONDO:0002061"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraductal breast papilloma","secondary_identifiers":["UMLS:C0238034","MEDGEN:65944","SCTID:254848002","SCTID:99571000119102","DOID:1626"],"synonyms":[{"name":"breast duct papilloma","type":"related"},{"name":"breast papilloma","type":"exact"},{"name":"duct papilloma of breast","type":"exact"},{"name":"duct papilloma of the breast","type":"exact"},{"name":"ductal breast papilloma","type":"exact"},{"name":"intraductal breast papilloma","type":"exact"},{"name":"intraductal papilloma of breast","type":"exact"},{"name":"intraductal papilloma of the breast","type":"exact"},{"name":"mammary duct papilloma","type":"exact"},{"name":"papilloma of breast","type":"exact"},{"name":"papilloma of the breast","type":"exact"}],"termid":"MONDO:0021097","xrefs":{"Monarch":{"xref_id":"0021097"}}}


id: GO:1902778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an alkane stimulus.","definition_xrefs":["GO_REF:0000071","PMID:23826995","GOC:mengo_curators","PMID:22958739","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to alkane","secondary_identifiers":["GO:1990373"],"synonyms":[{"name":"process resulting in tolerance to alkane","type":"narrow"}],"termid":"GO:1902778"}


id: PBO:0073222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 6C","termid":"PBO:0073222"}


id: MONDO:0017914
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pure or complex autosomal dominant spastic paraplegia (obsolete MONDO:0017914)","secondary_identifiers":["Orphanet:320342"],"synonyms":[{"name":"Pure or complicated autosomal dominant spastic paraplegia","type":"exact"}],"termid":"MONDO:0017914","xrefs":{"Monarch":{"xref_id":"0017914"}}}


id: GO:0047331
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerol + diphosphate = glycerol 1-phosphate + H+ + phosphate.","definition_xrefs":["EC:2.7.1.79","RHEA:13689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"diphosphate-glycerol phosphotransferase activity","secondary_identifiers":["MetaCyc:2.7.1.79-RXN","KEGG_REACTION:R01044"],"synonyms":[{"name":"PPi-glycerol phosphotransferase activity","type":"related"},{"name":"diphosphate:glycerol 1-phosphotransferase activity","type":"related"},{"name":"pyrophosphate--glycerol phosphotransferase activity","type":"related"}],"termid":"GO:0047331"}


id: PATO:0000176
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000176 metabolic function (obsolete PATO:0000176)","termid":"PATO:0000176"}


id: GO:0023039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a physical damage signal causes activation of a receptor.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal initiation by physical damage (obsolete GO:0023039)","synonyms":[{"name":"signal initiation by physical damage","type":"exact"}],"termid":"GO:0023039"}


id: MONDO:0859293
data:
  {"annotated_genes":["SJAG_02285"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85256],"is_not":false,"summary":null,"term":"MONDO:0859293"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with microcephaly, cerebral atrophy, and visual impairment","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620066","UMLS:C5774225","MEDGEN:1823998"],"termid":"MONDO:0859293","terms_by_termid":{"MONDO:0859293":null},"xrefs":{"Monarch":{"xref_id":"0859293"}}}


id: PBO:0071384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 7","termid":"PBO:0071384"}


id: PBO:0028953
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-T-shaped_cell_during_recovery_from_stationary_phase","termid":"PBO:0028953"}


id: PBO:0068824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 62, pseudogene","termid":"PBO:0068824"}


id: MONDO:0000743
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelial hyperplasia of the oral cavity mucosa associated with Epstein-Barr virus and found almost exclusively in persons with HIV infection. The lesion consists of a white patch that is often corrugated or hairy.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"},{"relation_name":"is_a","term_name":"post-viral disorder","termid":"MONDO:0021674"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oral hairy leukoplakia","secondary_identifiers":["DOID:0060315","SCTID:414952002","NCIT:C3722","MEDGEN:104797","UMLS:C0206186","ICD10CM:K13.3","MESH:D017733","ICD9:528.6"],"synonyms":[{"name":"hairy leukoplakia","type":"related"},{"name":"hairy leukoplakia of mouth","type":"exact"},{"name":"hairy leukoplakia of oral mucosa","type":"exact"},{"name":"hairy leukoplakia of the mouth","type":"exact"},{"name":"hairy leukoplakia of the oral mucosa","type":"exact"},{"name":"mouth hairy leukoplakia","type":"exact"},{"name":"oral cavity hairy leukoplakia","type":"exact"},{"name":"oral hairy keratosis","type":"exact"}],"termid":"MONDO:0000743","xrefs":{"Monarch":{"xref_id":"0000743"}}}


id: PBO:0000517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLK/STY/LAMMEr subfamily","termid":"PBO:0000517"}


id: GO:0034465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbon monoxide (CO) stimulus.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to carbon monoxide","termid":"GO:0034465"}


id: PBO:0054190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1565","termid":"PBO:0054190"}


id: PR:O13970
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 30S ribosomal protein S2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01278","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein mrp4, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.10c","secondary_identifiers":["UniProtKB:O13970"],"synonyms":[{"name":"Spom972h-rpsB","type":"exact"}],"termid":"PR:O13970"}


id: PBO:0084774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial outer membrane protein, ERMES complex subunit; required for transmission of mitochondria to daughter cells; required for mitophagy; may influence import and assembly of outer membrane beta-barrel proteins; ERMES complex is often co-localized with peroxisomes and with concentrated areas of pyruvate dehydrogenase","termid":"PBO:0084774"}


id: PBO:0041215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1D nuclear receptor corepressor pseudogene 3","termid":"PBO:0041215"}


id: FYPO:0004651
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A septation phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a secondary septum that is thinner than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased septum thickness","termid":"FYPO:0006900"},{"relation_name":"output_of","term_name":"abnormal secondary cell septum biogenesis","termid":"FYPO:0003211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000032","FYPO:0001320","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"decreased secondary cell septum thickness","synonyms":[{"name":"decreased secondary cell septum thickness during mitotic cell cycle","type":"related"},{"name":"decreased secondary cell septum thickness during vegetative growth","type":"exact"},{"name":"decreased secondary septum thickness","type":"exact"},{"name":"reduced secondary cell septum thickness","type":"exact"},{"name":"thin secondary septum","type":"exact"}],"termid":"FYPO:0004651"}


id: PBO:0030558
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glutamate_import_during_nitrogen_starvation","termid":"PBO:0030558"}


id: GO:0033722
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-oxopropanoate + NAD(P)+ + H2O = malonate + NAD(P)H + H+.","definition_xrefs":["EC:1.2.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"malonate-semialdehyde dehydrogenase activity","secondary_identifiers":["MetaCyc:MALONATE-SEMIALDEHYDE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"3-oxopropanoate:NAD(P)+ oxidoreductase activity","type":"related"},{"name":"malonic semialdehyde dehydrogenase activity","type":"related"}],"termid":"GO:0033722"}


id: FYPO:0000688
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity","termid":"FYPO:0000687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000661","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity","synonyms":[{"name":"reduced peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity","type":"exact"}],"termid":"FYPO:0000688"}


id: FYPO:0002386
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin at centromere outer repeat regions is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to heterochromatin during vegetative growth","termid":"FYPO:0002385"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin at centromere outer repeat","termid":"FYPO:0006818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to heterochromatin at centromere outer repeat","synonyms":[{"name":"deceased protein localization to heterochromatin at centromere otr","type":"exact"},{"name":"decreased protein localisation to heterochromatin at centromere outer repeat","type":"exact"},{"name":"decreased protein localization to centromere outer repeat heterochromatin","type":"exact"},{"name":"decreased protein localization to heterochromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to heterochromatin at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased protein localization to heterochromatin at centromeric outer repeat region","type":"exact"},{"name":"decreased protein localization to heterochromatin at pericentric region","type":"related"},{"name":"decreased protein localization to heterochromatin at pericentromeric region","type":"related"},{"name":"reduced protein localization to heterochromatin at centromere outer repeat","type":"exact"}],"termid":"FYPO:0002386"}


id: MONDO:0100048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing graft vs. host disease.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"graft-versus-host disease, susceptibility to","secondary_identifiers":["UMLS:C3280677","MEDGEN:482307","OMIM:614395"],"synonyms":[{"name":"GVHDS","type":"exact"}],"termid":"MONDO:0100048","xrefs":{"Monarch":{"xref_id":"0100048"}}}


id: MONDO:0971150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal recessive","termid":"MONDO:0015363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025","MONDO:0005244"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, autosomal recessive 11, with spasticity","secondary_identifiers":["OMIM:620854"],"termid":"MONDO:0971150","xrefs":{"Monarch":{"xref_id":"0971150"}}}


id: SO:0000604
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Edited mRNA sequence mediated by a single guide RNA (SO:0000602).","direct_ancestors":[{"relation_name":"is_a","term_name":"edited_transcript_feature","termid":"SO:0000579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"editing_block","synonyms":[{"name":"editing block","type":"exact"}],"termid":"SO:0000604"}


id: PBO:0060947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor I B","termid":"PBO:0060947"}


id: GO:0048840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the otolith over time, from its formation to the mature structure.","definition_xrefs":["GOC:sr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"inner ear development","termid":"GO:0048839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"otolith development","termid":"GO:0048840"}


id: MONDO:1010290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pulmonary agenesis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder, non-human animal","termid":"MONDO:0700104"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary agenesis, non-human animal","secondary_identifiers":["OMIA:002520"],"termid":"MONDO:1010290","xrefs":{"Monarch":{"xref_id":"1010290"}}}


id: MONDO:1011684
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alloimmune hemolytic anemia of the newborn, non-human animal","secondary_identifiers":["OMIA:000028"],"termid":"MONDO:1011684","xrefs":{"Monarch":{"xref_id":"1011684"}}}


id: MONDO:0021284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the ureter.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in situ carcinoma","termid":"MONDO:0004647"},{"relation_name":"is_a","term_name":"ureter carcinoma","termid":"MONDO:0006481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"carcinoma in situ of ureter","secondary_identifiers":["MEDGEN:1660901","NCIT:C4529","ICD9:233.9","UMLS:C4721448","SCTID:92782006"],"synonyms":[{"name":"carcinoma in situ of the ureter","type":"exact"},{"name":"carcinoma in situ of ureter","type":"exact"},{"name":"stage 0 ureter carcinoma","type":"exact"},{"name":"stage 0is carcinoma of the ureter","type":"exact"},{"name":"stage 0is carcinoma of ureter","type":"exact"},{"name":"stage 0is ureter cancer","type":"exact"},{"name":"stage 0is ureter cancer aJCC v7","type":"exact"},{"name":"stage 0is ureter carcinoma","type":"exact"},{"name":"stage 0is ureter urothelial cancer","type":"exact"},{"name":"stage 0is ureter urothelial carcinoma","type":"exact"},{"name":"stage 0is ureter urothelial carcinoma aJCC v7","type":"exact"},{"name":"stage 0is ureteral carcinoma","type":"exact"},{"name":"ureter cancer stage 0is","type":"exact"},{"name":"ureter carcinoma in situ","type":"exact"},{"name":"ureter in situ carcinoma","type":"exact"},{"name":"ureteral carcinoma in situ","type":"exact"}],"termid":"MONDO:0021284","xrefs":{"Monarch":{"xref_id":"0021284"}}}


id: GO:1901796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signal transduction by p53 class mediator.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"signal transduction by p53 class mediator","termid":"GO:0072331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of signal transduction by p53 class mediator","secondary_identifiers":["Reactome:R-HSA-5633007"],"termid":"GO:1901796"}


id: PBO:0085384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane ATP-binding cassette (ABC) transporter; weak-acid-inducible multidrug transporter required for weak organic acid resistance; induced by sorbate and benzoate and regulated by War1p; mutants exhibit sorbate hypersensitivity","termid":"PBO:0085384"}


id: GO:0015430
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + glycerol-3-phosphate(out) = ADP + phosphate + glycerol-3-phosphate(in).","definition_xrefs":["RHEA:21668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol-3-phosphate transmembrane transporter activity","termid":"GO:0015169"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ABC-type glycerol-3-phosphate transporter activity","secondary_identifiers":["EC:7.6.2.10","MetaCyc:ABC-34-RXN","GO:0070812","GO:0015610"],"synonyms":[{"name":"ABC-type glycerol 3-phosphate transporter","type":"exact"},{"name":"ATP-dependent glycerol-2-phosphate transmembrane transporter activity","type":"narrow"},{"name":"ATPase-coupled glycerol-2-phosphate transmembrane transporter activity","type":"narrow"},{"name":"ATPase-coupled glycerol-3-phosphate transmembrane transporter activity","type":"related"},{"name":"glycerol phosphate-importing ATPase activity","type":"narrow"},{"name":"glycerol-2-phosphate-transporting ATPase activity","type":"narrow"},{"name":"glycerol-3-phosphate ABC transporter","type":"exact"},{"name":"glycerol-3-phosphate-transporting ATPase","type":"related"},{"name":"glycerol-phosphate porter activity","type":"narrow"}],"termid":"GO:0015430"}


id: SO:0001229
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified RNA base in which the 5- position of the uracil is bound to the ribose ring instead of the 4- position.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine","secondary_identifiers":["http://en.wikipedia.org/wiki/Pseudouridine","RNAMOD:050"],"synonyms":[{"name":" Y","type":"exact"}],"termid":"SO:0001229"}


id: PBO:0047913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(9)(q32)","termid":"PBO:0047913"}


id: SO:0001773
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where the mutated gene product does not allow for one or more basic functions necessary for survival.","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_abnormal","termid":"SO:0002218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal_variant","synonyms":[{"name":"lethal variant","type":"exact"}],"termid":"SO:0001773"}


id: PBO:0080106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP20 small subunit processome component","termid":"PBO:0080106"}


id: MONDO:0024493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic qualifier indicating that a cancerous lesion is poorly differentiated.","definition_xrefs":["NCIT:C28079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor grade 2 or 3, general grading system","termid":"MONDO:0024496"},{"relation_name":"is_a","term_name":"tumor grade 3 or 4, general grading system","termid":"MONDO:0024497"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor grade 3, general grading system","secondary_identifiers":["MEDGEN:634567","UMLS:C0475271"],"synonyms":[{"name":"G3","type":"exact"},{"name":"grade 3","type":"exact"},{"name":"grade III","type":"exact"},{"name":"high grade","type":"broad"},{"name":"poorly differentiated","type":"exact"}],"termid":"MONDO:0024493","xrefs":{"Monarch":{"xref_id":"0024493"}}}


id: PBO:0004039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF2 alpha kinase Gcn2","termid":"PBO:0004039"}


id: GO:0044658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption of host plasma membrane integrity by formation of a pore, resulting in deregulated ion homeostasis, and cellular dysfunction that can result in cell death.","definition_xrefs":["PMID:7510043","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disruption of plasma membrane integrity in another organism","termid":"GO:0051673"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host membrane","termid":"GO:0141171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated pore formation in host plasma membrane","synonyms":[{"name":"pore formation in host plasma membrane","type":"exact"},{"name":"pore formation in membrane of host by symbiont","type":"broad"}],"termid":"GO:0044658"}


id: GO:0035579
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a specific granule, a granule with a membranous, tubular internal structure, found primarily in mature neutrophil cells. Most are released into the extracellular fluid. Specific granules contain lactoferrin, lysozyme, vitamin B12 binding protein and elastase.","definition_xrefs":["PMID:7334549","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule membrane","termid":"GO:0030667"},{"relation_name":"part_of","term_name":"specific granule","termid":"GO:0042581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"specific granule membrane","synonyms":[{"name":"secondary granule membrane","type":"exact"}],"termid":"GO:0035579"}


id: GO:0085011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the symbiont organism by a Sec complex. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via protein secreted by Sec complex (obsolete GO:0085011)","synonyms":[{"name":"interaction with host via protein secreted by Sec secretion system","type":"exact"}],"termid":"GO:0085011"}


id: GO:0023061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a signal is secreted or discharged into the extracellular medium from a cellular source.","definition_xrefs":["GOC:mtg_signal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"},{"relation_name":"part_of","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"signal release","synonyms":[{"name":"signal secretion","type":"exact"}],"termid":"GO:0023061"}


id: GO:0102766
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-naringenin(1-) + S-adenosyl-L-methionine = sakuranetin + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["GOC:pz","EC:2.1.1.232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"naringenin 7-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-7773","RHEA:31539"],"termid":"GO:0102766"}


id: RO:0002170
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a is connected to b if and only if a and b are discrete structure, and there exists some connecting structure c, such that c connects a and b","direct_ancestors":[{"relation_name":"is_a","term_name":"mereotopologically_related_to","termid":"RO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"connected_to","termid":"RO:0002170"}


id: PBO:0088617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTREC (exosome adaptor) complex zf-C2H2 type zinc finger subunit Pir2","termid":"PBO:0088617"}


id: PBO:0084904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial type 2C protein phosphatase (PP2C); has similarity to mammalian PP1Ks; involved in mitophagy; null mutant is sensitive to rapamycin and has decreased phosphorylation of the Pda1 subunit of pyruvate dehydrogenase","termid":"PBO:0084904"}


id: PBO:0089558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanosine 34-2'-O)-methyltransferase regulator Trm734","termid":"PBO:0089558"}


id: PBO:0082237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-isopropylmalate synthase (2-isopropylmalate synthase); the main isozyme responsible for the first step in the leucine biosynthesis pathway; LEU4 has a paralog, LEU9, that arose from the whole genome duplication","termid":"PBO:0082237"}


id: GO:0031717
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cannabinoid receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"cannabinoid receptor binding","synonyms":[{"name":"cannabinoid receptor ligand","type":"narrow"}],"termid":"GO:0031717"}


id: PBO:0085424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pleiotropic negative transcriptional regulator; involved in Ras-CAMP and lysine biosynthetic pathways and nitrogen regulation; involved in retrograde (RTG) mitochondria-to-nucleus signaling","termid":"PBO:0085424"}


id: PBO:0048774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP-mannose pyrophosphorylase A","termid":"PBO:0048774"}


id: MONDO:0002000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial meningitis","termid":"MONDO:0006670"},{"relation_name":"is_a","term_name":"anaerobic bacteria infectious disease","termid":"MONDO:0024389"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaerobic meningitis","secondary_identifiers":["UMLS:C0854214","ICD9:320.81","DOID:14559","MEDGEN:678523","SCTID:445059005"],"synonyms":[{"name":"meningitis caused by anaerobic bacteria","type":"exact"},{"name":"meningitis due to anaerobic bacteria","type":"exact"}],"termid":"MONDO:0002000","xrefs":{"Monarch":{"xref_id":"0002000"}}}


id: PBO:0039785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 12A","termid":"PBO:0039785"}


id: MONDO:0017658
data:
  {"annotated_genes":["SJAG_04203"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044330"}]},"cv_name":"mondo","definition":"A neurologic disorder classically characterized by pronounced startle responses to tactile or acoustic stimuli and hypertonia","definition_xrefs":["Wikipedia:Hyperekplexia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04203":null},"genotype_count":0,"is_obsolete":false,"name":"hyperekplexia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0234166","MEDGEN:488800","MESH:D000071017","GARD:21281","Orphanet:306773"],"termid":"MONDO:0017658","terms_by_termid":{"MONDO:0044330":null},"xrefs":{"Monarch":{"xref_id":"0017658"}}}


id: FYPO:0009111
data:
  {"alleles_by_uniquename":{"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119079],"is_not":false,"summary":null,"term":"FYPO:0009111"}]},"cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype that reflects increased occurrence of flocculation. Flocculation is the non-sexual aggregation of single cells.","definition_xrefs":["PMID:35924983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased flocculation","termid":"FYPO:0000155"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":1,"genotypes_by_uniquename":{"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased flocculation during vegetative growth","references_by_uniquename":{"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_02527"],"single_locus_genotype_uniquenames":["lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown"],"termid":"FYPO:0009111","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000081":null,"FYPO:0009111":null}}


id: PBO:0073931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 17 member 4","termid":"PBO:0073931"}


id: GO:0071633
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a dihydroceramide + H2O = a fatty acid + dihydrosphingosine.","definition_xrefs":["GOC:mah","PMID:10900202"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydroceramidase activity (obsolete GO:0071633)","termid":"GO:0071633"}


id: GO:1905926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of invadopodium assembly.","definition_xrefs":["GO_REF:0000058","PMID:15684033","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of invadopodium assembly (obsolete GO:1905926)","synonyms":[{"name":"activation of invadopodium assembly","type":"narrow"},{"name":"activation of invadopodium formation","type":"narrow"},{"name":"positive regulation of invadopodium formation","type":"exact"},{"name":"up regulation of invadopodium assembly","type":"exact"},{"name":"up regulation of invadopodium formation","type":"exact"},{"name":"up-regulation of invadopodium assembly","type":"exact"},{"name":"up-regulation of invadopodium formation","type":"exact"},{"name":"upregulation of invadopodium assembly","type":"exact"},{"name":"upregulation of invadopodium formation","type":"exact"}],"termid":"GO:1905926"}


id: PR:Q7Z992
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sst6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7Z992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT-I complex subunit vps23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11H11.01","synonyms":[{"name":"Spom972h-sst6","type":"exact"},{"name":"suppressor of ste12 deletion protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q7Z992"}


id: PR:O74323
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec11 gene.","definition_xrefs":["UniProtKB:O74323","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase complex catalytic subunit sec11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.03","synonyms":[{"name":"Spom972h-sec11","type":"exact"}],"termid":"PR:O74323"}


id: GO:0010178
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of the amide bond between IAA (auxin) and the conjugated amino acid.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"IAA-amino acid conjugate hydrolase activity","termid":"GO:0010178"}


id: PR:G2TRQ4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP23A10.17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRQ4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P23A10.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.17","synonyms":[{"name":"Spom972h-SPBP23A10.17","type":"exact"}],"termid":"PR:G2TRQ4"}


id: GO:0051367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The decanoylation of peptidyl-serine to form peptidyl-O3-decanoyl-L-serine, typical of the protein ghrelin.","definition_xrefs":["GOC:jsg","PMID:12630926","RESID:AA0385"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-serine decanoylation (obsolete GO:0051367)","termid":"GO:0051367"}


id: MONDO:0024522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary cutaneous amyloidosis in which the cause of the disease is a mutation in the OSMR gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial primary localized cutaneous amyloidosis","termid":"MONDO:0007101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093","MONDO:0021179"],"is_obsolete":false,"name":"amyloidosis, primary localized cutaneous, 1","secondary_identifiers":["DOID:0080930","OMIM:105250","GARD:18637","MEDGEN:1639046","UMLS:C4551501"],"synonyms":[{"name":"OSMR primary cutaneous amyloidosis","type":"exact"},{"name":"PCA","type":"related"},{"name":"PLCA1","type":"exact"},{"name":"amyloidosis 9","type":"exact"},{"name":"amyloidosis, familial cutaneous lichen","type":"related"},{"name":"amyloidosis, primary cutaneous, 1","type":"exact"},{"name":"amyloidosis, primary localised cutaneous, type 1","type":"exact"},{"name":"amyloidosis, primary localized cutaneous, 1","type":"exact"},{"name":"amyloidosis, primary localized cutaneous, type 1","type":"exact"},{"name":"lichen amyloidosis, familial","type":"related"},{"name":"primary cutaneous amyloidosis caused by mutation in OSMR","type":"exact"}],"termid":"MONDO:0024522","xrefs":{"Monarch":{"xref_id":"0024522"}}}


id: FYECO:0000186
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ferrous sulfate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ FeSO4","synonyms":[{"name":"iron sulfate added","type":"exact"},{"name":"iron sulphate added","type":"exact"}],"termid":"FYECO:0000186"}


id: GO:0050962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a light stimulus is received by a cell and converted into a molecular signal as part of the sensory perception of light.","definition_xrefs":["GOC:dos","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of light stimulus","termid":"GO:0009583"},{"relation_name":"is_a","term_name":"detection of stimulus involved in sensory perception","termid":"GO:0050906"},{"relation_name":"part_of","term_name":"sensory perception of light stimulus","termid":"GO:0050953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of light stimulus involved in sensory perception","synonyms":[{"name":"sensory detection of light stimulus","type":"exact"},{"name":"sensory detection of light stimulus during sensory perception","type":"exact"},{"name":"sensory perception, sensory detection of light stimulus","type":"exact"},{"name":"sensory perception, sensory transduction of light stimulus","type":"exact"},{"name":"sensory transduction of light stimulus","type":"exact"},{"name":"sensory transduction of light stimulus during sensory perception","type":"exact"}],"termid":"GO:0050962"}


id: PBO:0000071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA helicase in rearranged telomeric region, truncated","termid":"PBO:0000071"}


id: PBO:0109041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD reductase Coq12","termid":"PBO:0109041"}


id: GO:0036056
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized cell-cell junction found between the cells of the excretory system, which provides a barrier for filtration of blood or hemolymph.","definition_xrefs":["GOC:sart","PMID:18971929","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"filtration diaphragm","termid":"GO:0036056"}


id: PBO:0051409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 1-41 (pseudogene)","termid":"PBO:0051409"}


id: MONDO:0007711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bencze syndrome or hemifacial hyperplasia with strabismus is a malformation syndrome involving the abnormal growth of the facial skeleton as well as its soft tissue structure and organs, and is characterized by mild facial asymmetry with unaffected neurocranium and eyeballs, as well as by esotropia, amblyopia and/or convergent strabismus, and occasionally submucous cleft palate. Transmission is autosomal dominant. There have been no further descriptions in the literature since 1979.","definition_xrefs":["Orphanet:1241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bencze syndrome","secondary_identifiers":["UMLS:C1841640","SCTID:733046006","MESH:C564199","GARD:2633","MEDGEN:330655","OMIM:141350"],"synonyms":[{"name":"Bencze syndrome","type":"exact"},{"name":"hemifacial hyperplasia strabismus","type":"related"},{"name":"hemifacial hyperplasia with strabismus","type":"related"},{"name":"hemifacial hyperplasia-strabismus syndrome","type":"exact"}],"termid":"MONDO:0007711","xrefs":{"Monarch":{"xref_id":"0007711"}}}


id: GO:0047870
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(6)-dimethylallyladenine + S-adenosyl-L-methionine(1+) = S-methyl-5'-thioadenosine + discadenine + H+.","definition_xrefs":["EC:2.5.1.24","RHEA:19581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016765","GO:0003824"],"is_obsolete":false,"name":"discadenine synthase activity","secondary_identifiers":["KEGG_REACTION:R03726","MetaCyc:DISCADENINE-SYNTHASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:6-N-(Delta2-isopentenyl)-adenine 3-(3-amino-3-carboxypropyl)-transferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:N6-(Delta2-isopentenyl)-adenine 3-(3-amino-3-carboxypropyl)-transferas","type":"related"},{"name":"discadenine synthetase activity","type":"related"}],"termid":"GO:0047870"}


id: MONDO:0008741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"PAGOD syndrome is a severe developmental syndrome characterized by multiple congenital anomalies including cardiovascular defects, pulmonary hypoplasia, diaphragmatic defects and genital anomalies.","definition_xrefs":["Orphanet:991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"46,XY disorder of sex development","termid":"MONDO:0020040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAGOD syndrome","secondary_identifiers":["UMLS:C1859967","OMIM:202660","SCTID:722132007","GARD:3086","MESH:C537018","MEDGEN:347985"],"synonyms":[{"name":"Kennerknecht sorgo Oberhoffer syndrome","type":"related"},{"name":"PAGOD syndrome","type":"exact"},{"name":"agonadism with multiple internal malformations","type":"related"},{"name":"pulmonary hypoplasia, hypoplasia of the pulmonary artery, agonadism, omphalocele-diaphragmatic defect, and dextrocardia","type":"related"},{"name":"pulmonary hypoplasia-agonadism-dextrocardia-diaphragmatic hernia syndrome","type":"exact"}],"termid":"MONDO:0008741","xrefs":{"Monarch":{"xref_id":"0008741"}}}


id: PBO:0030063
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_phosphoglycerate_mutase_activity","termid":"PBO:0030063"}


id: FYPO:0003437
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a protein kinase activity is absent during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein kinase activity","termid":"FYPO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abolished protein kinase activity during mitotic G1 phase","synonyms":[{"name":"protein kinase activity abolished during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0003437"}


id: PBO:0054402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1798","termid":"PBO:0054402"}


id: GO:0043837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-valine + H2O + NAD+ = 3-methyl-2-oxobutanoate + NH3 + NADH.","definition_xrefs":["PMID:2803248","PMID:10612726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"valine dehydrogenase (NAD+) activity","secondary_identifiers":["EC:1.4.1.23","RHEA:30763"],"synonyms":[{"name":"ValDH","type":"related"},{"name":"valine dehydrogenase (NAD) activity","type":"exact"}],"termid":"GO:0043837"}


id: FYPO:0004815
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of siRNA derived from antisense transcription of ribosomal DNA measured in a cell is greater than normal.","definition_xrefs":["PMID:25417108","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased antisense RNA level","termid":"FYPO:0003557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased rDNA antisense siRNA level","synonyms":[{"name":"increased accumulation of rDNA antisense small RNAs","type":"related"},{"name":"increased antisense small RNA at rDNA","type":"exact"},{"name":"increased antisense transcription-derived small RNA level at rDNA","type":"exact"},{"name":"increased rDNA antisense small RNA accumulation","type":"related"},{"name":"increased rDNA antisense small RNA level during mitotic cell cycle","type":"related"},{"name":"increased rDNA antisense small RNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0004815"}


id: GO:0046813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a virion attaches to a host cell by binding to a receptor on the host cell surface.","definition_xrefs":["ISBN:0879694971"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion attachment to host cell","termid":"GO:0019062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"receptor-mediated virion attachment to host cell","synonyms":[{"name":"virion attachment, binding of host cell surface receptor","type":"exact"}],"termid":"GO:0046813"}


id: PBO:0004848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin reductase Trr1","termid":"PBO:0004848"}


id: PBO:0005354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome component alpha 7, Pre10 (predicted)","termid":"PBO:0005354"}


id: PBO:0000749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I, II and III subunit Rpb5","termid":"PBO:0000749"}


id: SO:0001256
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polyploid where the multiple chromosome set was derived from a different organism.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyploid","termid":"SO:0001254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allopolyploid","secondary_identifiers":["http://en.wikipedia.org/wiki/Allopolyploid"],"termid":"SO:0001256"}


id: PBO:0079424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta class I pseudogene 7","termid":"PBO:0079424"}


id: GO:0030056
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell-substrate junction (attachment structure) found in epithelial cells that links intermediate filaments to extracellular matrices via transmembrane complexes. In vertebrates, hemidesmosomes mediate contact between the basal side of epithelial cells and the basal lamina. In C. elegans, hemidesmosomes connect epithelial cells to distinct extracellular matrices on both the apical and basal cell surfaces.","definition_xrefs":["GOC:kmv","PMID:20205195","ISBN:0815316208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate junction","termid":"GO:0030055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"hemidesmosome","secondary_identifiers":["Wikipedia:Hemidesmosome"],"synonyms":[{"name":"epidermal attachment structure","type":"narrow"},{"name":"fibrous organelle","type":"narrow"},{"name":"hemi-adherens junction","type":"related"},{"name":"trans-epithelial attachment","type":"narrow"}],"termid":"GO:0030056"}


id: PBO:0079871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF1 RNA helicase and ATPase","termid":"PBO:0079871"}


id: SO:0002116
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A processed transcript that does not contain a CDS that fullfills annotation criteria and not necessarily functionally non-coding.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogene_processed_transcript","termid":"SO:0002111"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymorphic_pseudogene_processed_transcript","synonyms":[{"name":"polymorphic pseudogene processed transcript","type":"exact"}],"termid":"SO:0002116"}


id: PBO:0110411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 44 member 2 (CTL2 blood group)","termid":"PBO:0110411"}


id: GO:0042757
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Extremely large, unmyelinated axon found in invertebrates. Has high conduction speeds and is usually involved in panic or escape responses.","definition_xrefs":["GOC:jl","PMID:9705477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"giant axon","termid":"GO:0042757"}


id: MONDO:0043529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cardiac manifestation of gastrointestinal CARCINOID TUMOR that metastasizes to the liver. Substances secreted by the tumor cells, including SEROTONIN, promote fibrous plaque formation in ENDOCARDIUM and its underlying layers. These deposits cause distortion of the TRICUSPID VALVE and the PULMONARY VALVE eventually leading to STENOSIS and valve regurgitation.","definition_xrefs":["MESH:D002275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"carcinoid heart disease","secondary_identifiers":["SCTID:36222008","UMLS:C0007093","MEDGEN:762"],"synonyms":[{"name":"carcinoid heart disease","type":"exact"},{"name":"carcinoid heart diseases","type":"related"},{"name":"heart disease, carcinoid","type":"related"},{"name":"heart diseases, carcinoid","type":"related"}],"termid":"MONDO:0043529","xrefs":{"Monarch":{"xref_id":"0043529"}}}


id: MONDO:0001275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinal meningioma isa rare type of spinal cord cancer. The spinal cord is part of the central nervous system. This tumor often affects middle-aged women. Tumors of the spinal cord can be either primary or arise from other primary tumors (metastatic), and are typically slow growing. The initial signs and symptoms include headacheand recent onset of seizures. Other features are motor deficits, sensory deficits, pain, and sphincter dysfunction. The thoracic spine (middle back) is the most common site, followed by the cervical spine (neck). These tumors are rarely seen in the lumbar region (lower back). T he only proven risk factor in the development of meningioma is exposure to ionizing radiation. Also, patients with neurofibromatosis type 2 are at increased risk of developing meningioma. Surgery is the treatment of choice and complete tumor removal is reached in the vast majority of patients. The prognosis after surgical resection is excellent.","direct_ancestors":[{"relation_name":"is_a","term_name":"intraspinal meningioma","termid":"MONDO:0001279"},{"relation_name":"is_a","term_name":"spinal cord neoplasm","termid":"MONDO:0021234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal meningioma","secondary_identifiers":["NCIT:C6935","DOID:1138","SCTID:189167009","UMLS:C0347515","MEDGEN:87576","GARD:10264"],"synonyms":[{"name":"meningioma (disease) of spinal cord","type":"exact"},{"name":"meningioma of spinal cord","type":"exact"},{"name":"meningioma of the spinal cord","type":"exact"},{"name":"meningioma, spine","type":"related"},{"name":"spinal cord meningioma","type":"exact"},{"name":"spinal cord meningioma (disease)","type":"exact"}],"termid":"MONDO:0001275","xrefs":{"Monarch":{"xref_id":"0001275"}}}


id: GO:0043177
data:
  {"annotated_genes":["SJAG_03861"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016594"}]},"cv_name":"molecular_function","definition":"Binding to an organic acid, any acidic compound containing carbon in covalent linkage.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03861":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"organic acid binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043177","terms_by_termid":{"GO:0016594":null}}


id: PBO:0031127
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_proline_nitrogen_source","termid":"PBO:0031127"}


id: MONDO:0018196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete germ cell tumor of testis (obsolete MONDO:0018196)","termid":"MONDO:0018196","xrefs":{"Monarch":{"xref_id":"0018196"}}}


id: PBO:0091750
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.1960392_1960393insG","termid":"PBO:0091750"}


id: GO:0051617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of histamine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neurotransmitter uptake","termid":"GO:0051581"},{"relation_name":"is_a","term_name":"regulation of histamine uptake","termid":"GO:0051616"},{"relation_name":"negatively_regulates","term_name":"histamine uptake","termid":"GO:0051615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of histamine uptake","synonyms":[{"name":"down regulation of histamine uptake","type":"exact"},{"name":"down-regulation of histamine uptake","type":"exact"},{"name":"downregulation of histamine uptake","type":"exact"},{"name":"negative regulation of histamine import","type":"exact"}],"termid":"GO:0051617"}


id: PBO:0073921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 16 member 10","termid":"PBO:0073921"}


id: GO:0005918
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell-cell junction that forms a continuous band around each cell in an epithelium; within the septate junction the membranes of adjacent cells maintain a constant distance of approximately 15 nm; found in arthropods.","definition_xrefs":["ISBN:0815332181","PMID:20795303","PMID:11700298","PMID:28636800","PMID:12612641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tight junction","termid":"GO:0070160"},{"relation_name":"part_of","term_name":"apical junction complex","termid":"GO:0043296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"septate junction","secondary_identifiers":["NIF_Subcellular:sao427941916"],"synonyms":[{"name":"septate desmosome","type":"related"}],"termid":"GO:0005918"}


id: PBO:0030198
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_cytochalasin_B","termid":"PBO:0030198"}


id: PBO:0030047
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_ferric_iron_import","termid":"PBO:0030047"}


id: GO:0072370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2A by the addition of an phosphate group to a serine residue at position 121 of the histone.","definition_xrefs":["GOC:mah","PMID:19965387"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A-S121 phosphorylation (obsolete GO:0072370)","synonyms":[{"name":"histone H2A phosphorylation at S121","type":"exact"},{"name":"histone H2AS121 phosphorylation","type":"exact"}],"termid":"GO:0072370"}


id: GO:0043143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which proteins and protein complexes involved in translation are transported to, or maintained in, a specific location.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"},{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"part_of","term_name":"translation","termid":"GO:0006412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0010467"],"is_obsolete":false,"name":"regulation of translation by machinery localization","synonyms":[{"name":"establishment and maintenance of translational machinery localization","type":"exact"},{"name":"establishment and maintenance of translational protein localization","type":"exact"},{"name":"regulation of translation by machinery localisation","type":"exact"},{"name":"translational machinery localization","type":"exact"},{"name":"translational protein localization","type":"exact"}],"termid":"GO:0043143"}


id: FYPO:0001786
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which sterol binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sterol binding","termid":"FYPO:0001785"},{"relation_name":"is_a","term_name":"abolished lipid binding","termid":"FYPO:0006937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abolished sterol binding","synonyms":[{"name":"abolished cholesterol binding","type":"narrow"},{"name":"abolished ergosterol binding","type":"narrow"},{"name":"sterol binding abolished","type":"exact"}],"termid":"FYPO:0001786"}


id: GO:0001732
data:
  {"annotated_genes":["SJAG_04900","SJAG_02390","SJAG_02628","SJAG_03472","SJAG_04744","SJAG_03147","SJAG_02376","SJAG_04891","SJAG_02995","SJAG_02164","SJAG_04981","SJAG_00662"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89419,94274,95355,96342,97222,97283,98430,99599,104814,105100,110189,110831],"is_not":false,"summary":null,"term":"GO:0001732"}]},"cv_name":"biological_process","definition":"Joining of the large ribosomal subunit with the translation preinitiation complex, with release of IF2/eIF2 and IF3/eIF3 or IF5B/eIF5B. This leaves the functional ribosome at the AUG, with the methionyl/formyl-methionyl-tRNA positioned at the P site.","definition_xrefs":["GOC:hjd","PMID:29735639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"cytoplasmic translational initiation","termid":"GO:0002183"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00662":null,"SJAG_02164":null,"SJAG_02376":null,"SJAG_02390":null,"SJAG_02628":null,"SJAG_02995":null,"SJAG_03147":null,"SJAG_03472":null,"SJAG_04744":null,"SJAG_04891":null,"SJAG_04900":null,"SJAG_04981":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0002181"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0010467","GO:0002181","GO:0044085"],"is_obsolete":false,"name":"formation of cytoplasmic translation initiation complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytoplasmic translation initiation complex assembly","type":"exact"},{"name":"formation of translation initiation complex","type":"broad"},{"name":"translation initiation complex assembly","type":"broad"}],"termid":"GO:0001732","terms_by_termid":{"GO:0001732":null}}


id: GO:0071688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins to form the myosin-based thick filaments of myofibrils in striated muscle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"is_a","term_name":"myosin filament assembly","termid":"GO:0031034"},{"relation_name":"part_of","term_name":"myofibril assembly","termid":"GO:0030239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0030036","GO:0044085","GO:0065003","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"striated muscle myosin thick filament assembly","termid":"GO:0071688"}


id: PR:P87148
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein YIF1A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03637","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein yif1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.06c","secondary_identifiers":["UniProtKB:P87148"],"synonyms":[{"name":"Spom972h-YIF1A","type":"exact"},{"name":"YIP1-interacting factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"heavy metal resistance factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87148"}


id: GO:1903097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency or extent of the formation of nucleosomes containing the histone H3 variant CENP-A to form centromeric chromatin. This specialised chromatin occurs at centromeric region in point centromeres, and the central core in modular centromeres.","definition_xrefs":["PMID:24710126","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of CENP-A containing nucleosome assembly (obsolete GO:1903097)","synonyms":[{"name":"regulation of CENP-A deposition","type":"related"},{"name":"regulation of CENP-A loading","type":"related"},{"name":"regulation of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"regulation of DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"regulation of centromere specific nucleosome exchange","type":"related"},{"name":"regulation of centromere-specific histone exchange","type":"exact"},{"name":"regulation of centromere-specific nucleosome assembly","type":"exact"},{"name":"regulation of centromeric DNA replication-independent nucleosome assembly","type":"exact"}],"termid":"GO:1903097"}


id: PBO:0016910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug103","termid":"PBO:0016910"}


id: GO:0051222
data:
  {"annotated_genes":["SJAG_02592","SJAG_04312","SJAG_03048","SJAG_03453","SJAG_01805","SJAG_04464","SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93289,99937,101350,110501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[90331,93857,101887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of a protein into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of protein transport","termid":"GO:0051223"},{"relation_name":"is_a","term_name":"positive regulation of establishment of protein localization","termid":"GO:1904951"},{"relation_name":"positively_regulates","term_name":"protein transport","termid":"GO:0015031"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01245":null,"SJAG_01805":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_04312":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein transport","type":"narrow"},{"name":"stimulation of protein transport","type":"narrow"},{"name":"up regulation of protein transport","type":"exact"},{"name":"up-regulation of protein transport","type":"exact"},{"name":"upregulation of protein transport","type":"exact"}],"termid":"GO:0051222","terms_by_termid":{"GO:0042307":null,"GO:0046827":null}}


id: MONDO:0013751
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant cutis laxa in which the cause of the disease is a mutation in the FBLN5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cutis laxa","termid":"MONDO:0019571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0000426"],"is_obsolete":false,"name":"cutis laxa, autosomal dominant 2","secondary_identifiers":["MEDGEN:482424","OMIM:614434","DOID:0070136","GARD:15802","UMLS:C3280794"],"synonyms":[{"name":"ADCL2","type":"related"},{"name":"FBLN5 autosomal dominant cutis laxa","type":"exact"},{"name":"autosomal dominant cutis laxa 2","type":"exact"},{"name":"autosomal dominant cutis laxa caused by mutation in FBLN5","type":"exact"},{"name":"cutis laxa, autosomal dominant 2","type":"exact"},{"name":"cutis laxa, autosomal dominant type 2","type":"exact"}],"termid":"MONDO:0013751","xrefs":{"Monarch":{"xref_id":"0013751"}}}


id: GO:0000987
data:
  {"annotated_genes":["SJAG_03735","SJAG_01930","SJAG_05247","SJAG_01441","SJAG_06599","SJAG_03241","SJAG_02406","SJAG_02326","SJAG_04009","SJAG_02218","SJAG_03879","SJAG_04092","SJAG_01243","SJAG_05337","SJAG_00664","SJAG_04421","SJAG_05006","SJAG_04584","SJAG_00210","SJAG_00421","SJAG_00802","SJAG_03183","SJAG_00698","SJAG_01343","SJAG_02149","SJAG_03918","SJAG_02048","SJAG_02730","SJAG_00037","SJAG_02938","SJAG_04813","SJAG_04191","SJAG_04381","SJAG_02956","SJAG_03354","SJAG_03143","SJAG_01307","SJAG_03473","SJAG_04749","SJAG_03346","SJAG_00693","SJAG_00124","SJAG_01694","SJAG_02709","SJAG_02311","SJAG_05288","SJAG_03538","SJAG_02810","SJAG_00792","SJAG_04855","SJAG_01740","SJAG_01062","SJAG_02138","SJAG_02052","SJAG_00266","SJAG_04839","SJAG_03911","SJAG_03519","SJAG_00304","SJAG_01583","SJAG_04036","SJAG_02472","SJAG_04712","SJAG_01725","SJAG_01157","SJAG_05343","SJAG_02252","SJAG_05153","SJAG_04249","SJAG_00861","SJAG_03484","SJAG_03120","SJAG_00386","SJAG_00987","SJAG_00926","SJAG_00979","SJAG_03388","SJAG_06576","SJAG_02569","SJAG_00163","SJAG_03622","SJAG_04388","SJAG_05339"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115571],"is_not":false,"summary":null,"term":"GO:0000987"},{"annotations":[110359,117567,93552,97027,96549,108539,113180,100989,88518,101550,87878,101733,105863,95531,116106,111376,117852,93199,101786,99309,91400,103957,97922,103952,106545,110551,114330,102202,99623,110376,91952,108845,92784,99005,97024,104278,97026,110392,115970,89576,106220,108298,108682,94229,96791,96868,97025,97028,97607,99997,111416,87934,103058,107470,92783,108125,103460,94212,95775,79924,105746,88943,108681,110218,105335,111415,116988,106491,115574,112902,105603,95181,96068,107711,114079,96419,87073,113583,107069,87508,87437,92726,92238,109187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000978"},{"annotations":[106546,108299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044377"},{"annotations":[99082,87663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000992"},{"annotations":[99084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001002"},{"annotations":[99085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001003"},{"annotations":[102572,95070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001006"}]},"cv_name":"molecular_function","definition":"Binding to a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site, located in cis relative to the transcription start site (i.e., on the same strand of DNA) of a gene transcribed by some RNA polymerase. Cis-regulatory sites are often referred to as a sequence motifs, enhancers, or silencers.","definition_xrefs":["GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription cis-regulatory region binding","termid":"GO:0000976"}],"gene_count":83,"genes_by_uniquename":{"SJAG_00037":null,"SJAG_00124":null,"SJAG_00163":null,"SJAG_00210":null,"SJAG_00266":null,"SJAG_00304":null,"SJAG_00386":null,"SJAG_00421":null,"SJAG_00664":null,"SJAG_00693":null,"SJAG_00698":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00861":null,"SJAG_00926":null,"SJAG_00979":null,"SJAG_00987":null,"SJAG_01062":null,"SJAG_01157":null,"SJAG_01243":null,"SJAG_01307":null,"SJAG_01343":null,"SJAG_01441":null,"SJAG_01583":null,"SJAG_01694":null,"SJAG_01725":null,"SJAG_01740":null,"SJAG_01930":null,"SJAG_02048":null,"SJAG_02052":null,"SJAG_02138":null,"SJAG_02149":null,"SJAG_02218":null,"SJAG_02252":null,"SJAG_02311":null,"SJAG_02326":null,"SJAG_02406":null,"SJAG_02472":null,"SJAG_02569":null,"SJAG_02709":null,"SJAG_02730":null,"SJAG_02810":null,"SJAG_02938":null,"SJAG_02956":null,"SJAG_03120":null,"SJAG_03143":null,"SJAG_03183":null,"SJAG_03241":null,"SJAG_03346":null,"SJAG_03354":null,"SJAG_03388":null,"SJAG_03473":null,"SJAG_03484":null,"SJAG_03519":null,"SJAG_03538":null,"SJAG_03622":null,"SJAG_03735":null,"SJAG_03879":null,"SJAG_03911":null,"SJAG_03918":null,"SJAG_04009":null,"SJAG_04036":null,"SJAG_04092":null,"SJAG_04191":null,"SJAG_04249":null,"SJAG_04381":null,"SJAG_04388":null,"SJAG_04421":null,"SJAG_04584":null,"SJAG_04712":null,"SJAG_04749":null,"SJAG_04813":null,"SJAG_04839":null,"SJAG_04855":null,"SJAG_05006":null,"SJAG_05153":null,"SJAG_05247":null,"SJAG_05288":null,"SJAG_05337":null,"SJAG_05339":null,"SJAG_05343":null,"SJAG_06576":null,"SJAG_06599":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0000976","GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cis-regulatory region sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0001159","GO:0001150","GO:0035326","GO:0000986","GO:0001158"],"synonyms":[{"name":"bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type RNA polymerase enhancer sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type RNA polymerase upstream activating sequence (UAS) sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type cis-regulatory region sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type proximal promoter sequence-specific DNA binding","type":"narrow"},{"name":"cis-regulatory region binding","type":"related"},{"name":"core promoter proximal region DNA binding","type":"narrow"},{"name":"core promoter proximal region sequence-specific DNA binding","type":"narrow"},{"name":"enhancer binding","type":"related"},{"name":"enhancer sequence-specific DNA binding","type":"related"},{"name":"eubacterial-type RNA polymerase regulatory transcription factor sequence-specific DNA binding","type":"narrow"},{"name":"promoter proximal region sequence-specific DNA binding","type":"narrow"},{"name":"proximal promoter sequence-specific DNA binding","type":"narrow"}],"termid":"GO:0000987","terms_by_termid":{"GO:0000978":null,"GO:0000987":null,"GO:0000992":null,"GO:0001002":null,"GO:0001003":null,"GO:0001006":null,"GO:0044377":null}}


id: PBO:0083396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ORF RGI1/YER067W","termid":"PBO:0083396"}


id: GO:0018196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-asparagine.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-asparagine modification (obsolete GO:0018196)","termid":"GO:0018196"}


id: FYPO:0000530
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the mitotic cell cycle arrest that normally occurs in response to pheromone is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal response to pheromone","termid":"FYPO:0000302"},{"relation_name":"is_a","term_name":"abnormal occurrence of normal mitotic cell cycle arrest","termid":"FYPO:0001026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0000298","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitotic cell cycle arrest in response to pheromone","synonyms":[{"name":"abnormal pheromone-induced mitotic cell cycle arrest","type":"exact"},{"name":"pheromone-induced cell cycle arrest: abnormal","type":"related"}],"termid":"FYPO:0000530"}


id: PBO:0041077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biogenesis of ribosomes BRX1","termid":"PBO:0041077"}


id: MONDO:0019593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 46,XX disorder of sex development induced by fetal androgens excess (obsolete MONDO:0019593)","secondary_identifiers":["Orphanet:90776"],"synonyms":[{"name":"46,XX DSD induced by fetal androgens excess","type":"exact"},{"name":"46,XX DSD induced by foetal androgens excess","type":"exact"}],"termid":"MONDO:0019593","xrefs":{"Monarch":{"xref_id":"0019593"}}}


id: MONDO:0004166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fallopian tube carcinoma that has developed in relatives of patients that have a history of fallopian tube carcinoma.","definition_xrefs":["NCIT:C40455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"fallopian tube carcinoma","termid":"MONDO:0006206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"hereditary fallopian tube carcinoma","secondary_identifiers":["MEDGEN:307556","UMLS:C1512418","DOID:7266"],"synonyms":[{"name":"familial fallopian tube carcinoma","type":"exact"},{"name":"familiar fallopian tube carcinoma","type":"related"},{"name":"hereditary fallopian tube cancer","type":"exact"},{"name":"hereditary fallopian tube carcinoma","type":"exact"}],"termid":"MONDO:0004166","xrefs":{"Monarch":{"xref_id":"0004166"}}}


id: GO:0030386
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses ferredoxin-thioredoxin reductase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"},{"relation_name":"part_of","term_name":"chloroplast","termid":"GO:0009507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"ferredoxin-thioredoxin reductase complex","synonyms":[{"name":"ferredoxin:thioredoxin reductase complex","type":"exact"}],"termid":"GO:0030386"}


id: PBO:0091293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA initiator Methionine","termid":"PBO:0091293"}


id: MONDO:0019317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Bazex-Dupre-Christol syndrome","termid":"MONDO:0010535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"follicular atrophoderma-basal cell carcinoma","secondary_identifiers":["Orphanet:79459"],"termid":"MONDO:0019317","xrefs":{"Monarch":{"xref_id":"0019317"}}}


id: PBO:0045014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disco interacting protein 2 homolog C","termid":"PBO:0045014"}


id: PBO:0073214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 4G","termid":"PBO:0073214"}


id: PBO:0043891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich transmembrane BMP regulator 1","termid":"PBO:0043891"}


id: GO:1990384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which the hyaloid vascular plexus is destroyed as a part of its normal progression.","definition_xrefs":["PMID:18841878","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure regression","termid":"GO:0060033"},{"relation_name":"part_of","term_name":"camera-type eye development","termid":"GO:0043010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hyaloid vascular plexus regression","termid":"GO:1990384"}


id: MONDO:0004927
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital or acquired mucocele that develops in the lacrimal sac. It is usually the result of nasolacrimal duct abnormalities or obstruction.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic inflammation of lacrimal passage","termid":"MONDO:0004923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"dacryocystocele","secondary_identifiers":["ICD9:375.43","UMLS:C0155241","MEDGEN:472901","DOID:9939"],"synonyms":[{"name":"lacrimal mucocele","type":"exact"}],"termid":"MONDO:0004927","xrefs":{"Monarch":{"xref_id":"0004927"}}}


id: GO:0080170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which hydrogen peroxide is transported across a membrane.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"hydrogen peroxide transmembrane transport","synonyms":[{"name":"hydrogen peroxide membrane transport","type":"exact"}],"termid":"GO:0080170"}


id: MOD:01969
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(gamma-glutamyl-cysteinyl-glycyl)-cysteine.","definition_xrefs":["RESID:AA0611","PubMed:9398217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(gamma-glutamyl-cysteinyl-glycyl)-cysteine","synonyms":[{"name":"(2S)-2-amino-5-([(2R)-1-([2-([(2R)-2-amino-2-carboxyethyl]sulfanyl)-2-oxoethyl]amino)-1-oxo-3-sulfanylpropan-2-yl]amino)-5-oxopentanoic acid","type":"exact"},{"name":"ACT_SITE S-(gamma-glutamyl-cysteinyl-glycyl)-cysteine intermediate","type":"exact"},{"name":"S-(gamma-glutamyl-cysteinyl-glycyl)-cysteine","type":"exact"},{"name":"S-(glutathion-1-yl)-L-cysteine","type":"exact"}],"termid":"MOD:01969"}


id: PBO:0051952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol 1,4,5-trisphosphate receptor type 1","termid":"PBO:0051952"}


id: FYPO:0001565
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-threonine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular threonine level","synonyms":[{"name":"increased cellular L-threonine level","type":"exact"},{"name":"increased cellular threonine level during mitotic cell cycle","type":"related"},{"name":"increased cellular threonine level during vegetative growth","type":"exact"},{"name":"increased threonine accumulation","type":"related"}],"termid":"FYPO:0001565"}


id: MONDO:0013178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital muscular dystrophy due to LMNA mutation is a rare congenital muscular dystrophy characterized by prominent axial hypotonia, dropped head syndrome, predominantly proximal muscle weakness in upper limbs/distal in lower limbs (with absent, poor or lost motor development), joint contractures (initially distal, later proximal), spine rigidity, and early respiratory insufficiency, in the presence of moderately elevated serum creatine kinase. Cardiac arrhythmias and sudden death have been also reported.","definition_xrefs":["Orphanet:157973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"congenital muscular dystrophy due to LMNA mutation","secondary_identifiers":["NANDO:2200866","MEDGEN:413043","DOID:0110640","GARD:12585","UMLS:C2750785","MESH:C567708","OMIM:613205","NCIT:C148369"],"synonyms":[{"name":"L-CMD","type":"exact"},{"name":"LMNA congenital muscular dystrophy","type":"exact"},{"name":"LMNA-related congenital muscular dystrophy","type":"exact"},{"name":"MDCL","type":"related"},{"name":"congenital muscular dystrophy LMNA-related","type":"exact"},{"name":"congenital muscular dystrophy caused by mutation in LMNA","type":"exact"},{"name":"muscular dystrophy Congenital, LMNA-related","type":"exact"},{"name":"muscular dystrophy, congenital","type":"exact"},{"name":"muscular dystrophy, congenital, LMNA-related","type":"related"}],"termid":"MONDO:0013178","xrefs":{"Monarch":{"xref_id":"0013178"}}}


id: GO:1901095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein homotetramerization.","definition_xrefs":["GOC:TermGenie","GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein homooligomerization","termid":"GO:0032464"},{"relation_name":"is_a","term_name":"positive regulation of protein tetramerization","termid":"GO:1901092"},{"relation_name":"is_a","term_name":"regulation of protein homotetramerization","termid":"GO:1901093"},{"relation_name":"positively_regulates","term_name":"protein homotetramerization","termid":"GO:0051289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein homotetramerization","synonyms":[{"name":"activation of protein homotetramer assembly","type":"narrow"},{"name":"activation of protein homotetramer biosynthesis","type":"narrow"},{"name":"activation of protein homotetramer biosynthetic process","type":"narrow"},{"name":"activation of protein homotetramer formation","type":"narrow"},{"name":"activation of protein homotetramerization","type":"narrow"},{"name":"positive regulation of protein homotetramer assembly","type":"exact"},{"name":"positive regulation of protein homotetramer biosynthesis","type":"exact"},{"name":"positive regulation of protein homotetramer biosynthetic process","type":"exact"},{"name":"positive regulation of protein homotetramer formation","type":"exact"},{"name":"up regulation of protein homotetramer assembly","type":"exact"},{"name":"up regulation of protein homotetramer biosynthesis","type":"exact"},{"name":"up regulation of protein homotetramer biosynthetic process","type":"exact"},{"name":"up regulation of protein homotetramer formation","type":"exact"},{"name":"up regulation of protein homotetramerization","type":"exact"},{"name":"up-regulation of protein homotetramer assembly","type":"exact"},{"name":"up-regulation of protein homotetramer biosynthesis","type":"exact"},{"name":"up-regulation of protein homotetramer biosynthetic process","type":"exact"},{"name":"up-regulation of protein homotetramer formation","type":"exact"},{"name":"up-regulation of protein homotetramerization","type":"exact"},{"name":"upregulation of protein homotetramer assembly","type":"exact"},{"name":"upregulation of protein homotetramer biosynthesis","type":"exact"},{"name":"upregulation of protein homotetramer biosynthetic process","type":"exact"},{"name":"upregulation of protein homotetramer formation","type":"exact"},{"name":"upregulation of protein homotetramerization","type":"exact"}],"termid":"GO:1901095"}


id: PBO:0065983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid early transcript 1G","termid":"PBO:0065983"}


id: GO:0051628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of epinephrine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of epinephrine uptake","termid":"GO:0051626"},{"relation_name":"positively_regulates","term_name":"epinephrine uptake","termid":"GO:0051625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of epinephrine uptake","synonyms":[{"name":"activation of epinephrine uptake","type":"narrow"},{"name":"positive regulation of adrenaline uptake","type":"exact"},{"name":"positive regulation of epinephrine import","type":"exact"},{"name":"stimulation of epinephrine uptake","type":"narrow"},{"name":"up regulation of epinephrine uptake","type":"exact"},{"name":"up-regulation of epinephrine uptake","type":"exact"},{"name":"upregulation of epinephrine uptake","type":"exact"}],"termid":"GO:0051628"}


id: PBO:0080634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 82 pseudogene 2","termid":"PBO:0080634"}


id: PBO:0000127
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Srb9","termid":"PBO:0000127"}


id: PBO:0081642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 568","termid":"PBO:0081642"}


id: FYPO:0006451
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which methylated histone binding by a gene product (usually a protein) in a mutant occurs to a lower extent than normal. The affected protein may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"},{"relation_name":"is_a","term_name":"abnormal methylated histone binding","termid":"FYPO:0004231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"decreased methylated histone binding","synonyms":[{"name":"reduced methylated histone binding","type":"exact"}],"termid":"FYPO:0006451"}


id: PBO:0055117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2536","termid":"PBO:0055117"}


id: MONDO:0007898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte nuclear appendages, hereditary prevalence of","secondary_identifiers":["MEDGEN:320594","OMIM:151500","MESH:C563626","UMLS:C1835405"],"synonyms":[{"name":"leukocyte nuclear appendages, hereditary prevalence of","type":"exact"}],"termid":"MONDO:0007898","xrefs":{"Monarch":{"xref_id":"0007898"}}}


id: MONDO:0041755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"twin to twin transfusion syndrome","termid":"MONDO:0019805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"twin reversal arterial perfusion syndrome","secondary_identifiers":["SCTID:417006004","UMLS:C1562817","MEDGEN:736778"],"synonyms":[{"name":"twin reversal arterial perfusion syndrome","type":"exact"}],"termid":"MONDO:0041755","xrefs":{"Monarch":{"xref_id":"0041755"}}}


id: PBO:0026731
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_mitotic_spindle_pole_body_during_anaphase","termid":"PBO:0026731"}


id: GO:0045776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the force of blood traveling through the circulatory system is decreased.","definition_xrefs":["GOC:mtg_cardio","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood pressure","termid":"GO:0008217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood pressure","synonyms":[{"name":"down regulation of blood pressure","type":"exact"},{"name":"down-regulation of blood pressure","type":"exact"},{"name":"downregulation of blood pressure","type":"exact"},{"name":"inhibition of blood pressure","type":"narrow"}],"termid":"GO:0045776"}


id: PBO:0064161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group IIF","termid":"PBO:0064161"}


id: GO:0051506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-glucose + ergosterol = UDP + O-glucosyl-ergosterol.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete ergosterol UDP-glucosyltransferase activity (obsolete GO:0051506)","termid":"GO:0051506"}


id: PBO:0082564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chaperone protein; required for the assembly of box H/ACA snoRNPs and thus for pre-rRNA processing; functions as an RNA mimic; forms a complex with Naf1p and interacts with H/ACA snoRNP components Nhp2p and Cbf5p; homology with known Hsp90p cochaperones; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0082564"}


id: RO:0002569
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of branching part of","direct_ancestors":[{"relation_name":"is_a","term_name":"in_branching_relationship_with","termid":"RO:0002375"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_branching_part","termid":"RO:0002569"}


id: GO:0002201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The somatic process that results in the generation of sequence diversity of the DSCAM-based immune receptors of insects.","definition_xrefs":["GOC:add","PMID:16261174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors","termid":"GO:0002200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic diversification of DSCAM-based immune receptors","termid":"GO:0002201"}


id: GO:0045612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hemocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of hemocyte differentiation","termid":"GO:0045610"},{"relation_name":"positively_regulates","term_name":"hemocyte differentiation","termid":"GO:0042386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hemocyte differentiation","synonyms":[{"name":"activation of hemocyte differentiation","type":"narrow"},{"name":"positive regulation of arthropod blood cell differentiation","type":"exact"},{"name":"stimulation of hemocyte differentiation","type":"narrow"},{"name":"up regulation of hemocyte differentiation","type":"exact"},{"name":"up-regulation of hemocyte differentiation","type":"exact"},{"name":"upregulation of hemocyte differentiation","type":"exact"}],"termid":"GO:0045612"}


id: PBO:0084115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Helicase-like protein encoded within the telomeric Y' element","termid":"PBO:0084115"}


id: MONDO:0005892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Otitis media associated with accumulation of fluid in the middle ear.","definition_xrefs":["NCIT:C34886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic non-suppurative otitis media","termid":"MONDO:0021206"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otitis media with effusion","secondary_identifiers":["MEDGEN:629314","MESH:D010034","SCTID:78868004","UMLS:C0456498","ICD9:381.29","ICD9:381.20","EFO:0007415"],"synonyms":[{"name":"OME","type":"exact"},{"name":"secretory otitis Media","type":"exact"},{"name":"serous otitis Media","type":"exact"}],"termid":"MONDO:0005892","xrefs":{"Monarch":{"xref_id":"0005892"}}}


id: PBO:0060917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromin 1 pseudogene 4","termid":"PBO:0060917"}


id: FYPO:0005814
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plus ends of microtubules does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule during vegetative growth","termid":"FYPO:0003269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to microtubule plus-end","synonyms":[{"name":"abolished protein localisation to microtubule plus-end","type":"exact"},{"name":"abolished protein localization to microtubule plus end","type":"exact"},{"name":"abolished protein localization to microtubule plus-end during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to microtubule plus-end during vegetative growth","type":"exact"},{"name":"protein localization to microtubule plus-end abolished","type":"exact"}],"termid":"FYPO:0005814"}


id: GO:0015469
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A toxin that exerts its effects by forming a channel in a membrane that allows the unregulated passage of substances into and out of the cell.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete channel-forming toxin activity (obsolete GO:0015469)","synonyms":[{"name":"channel-forming toxin activity","type":"exact"}],"termid":"GO:0015469"}


id: GO:0061221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a mesonephric mesenchymal tissue are generated and organized. Mesonephric mesenchyme is the tissue made up of loosely connected mesenchymal cells in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney mesenchyme morphogenesis","termid":"GO:0072131"},{"relation_name":"part_of","term_name":"mesonephric mesenchyme development","termid":"GO:0061219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric mesenchyme morphogenesis","termid":"GO:0061221"}


id: PBO:0063403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCL2 pseudogene 2","termid":"PBO:0063403"}


id: PBO:0063028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein interacting protein 1","termid":"PBO:0063028"}


id: GO:0046972
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H4 L-lysine (position 16) = CoA + histone H4 N6-acetyl-L-lysine (position 16). This reaction represents the addition of an acetyl group to the lysine at position 16 of histone H4.","definition_xrefs":["PMID:18552846","PMID:19056256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4 acetyltransferase activity","termid":"GO:0010485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0034212","GO:0003824","GO:0016740","GO:0140096","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"histone H4K16 acetyltransferase activity","synonyms":[{"name":"histone acetylase activity (H4-K16 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H4-K16 specific)","type":"exact"},{"name":"histone lysine acetyltransferase activity (H4-K16 specific)","type":"exact"}],"termid":"GO:0046972"}


id: GO:0018141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl cysteine-peptidyl lysine cross-link by the condensation of a cysteine thiol with the carbonyl of the preceding residue and alpha-beta dehydrogenation.","definition_xrefs":["RESID:AA0245"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-lysine thiazolecarboxylic acid (obsolete GO:0018141)","termid":"GO:0018141"}


id: FYPO:0009007
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which a lower than normal proportion of cells is viable. In High Throughput Phenotyping this is typically assessed using phloxine as a dye.","definition_xrefs":["PMID:34984977","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"decreased vegetative cell population viability","synonyms":[{"name":"decreased cell population viability during vegetative growth","type":"exact"}],"termid":"FYPO:0009007"}


id: MONDO:0031003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypercholanemia, familial","termid":"MONDO:0100327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"hypercholanemia, familial, 2","secondary_identifiers":["OMIM:619256","GARD:18341","MEDGEN:1780531","UMLS:C5543243"],"synonyms":[{"name":"FHCA2","type":"exact"},{"name":"NTCP Deficiency","type":"exact"},{"name":"hypercholanemia, familial 2","type":"exact"}],"termid":"MONDO:0031003","xrefs":{"Monarch":{"xref_id":"0031003"}}}


id: PBO:0072901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cancer cell invasion","termid":"PBO:0072901"}


id: PBO:0028032
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_chromosome_fragmentation_upon_segregation","termid":"PBO:0028032"}


id: PBO:0057167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 320d-1","termid":"PBO:0057167"}


id: MONDO:0032610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 5","secondary_identifiers":["DOID:0112068","MEDGEN:1648292","OMIM:618226","UMLS:C4748754","GARD:16315"],"synonyms":[{"name":"MC1DN5","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 5","type":"related"}],"termid":"MONDO:0032610","xrefs":{"Monarch":{"xref_id":"0032610"}}}


id: SO:0002323
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A frameshift_variant (SO:0001589) that is degraded by nonsense-mediated decay (NMD).","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift_variant","termid":"SO:0001589"},{"relation_name":"is_a","term_name":"NMD_triggering_variant","termid":"SO:0002319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frameshift_variant_NMD_triggering","synonyms":[{"name":"frameshift variant-NMD triggering","type":"exact"},{"name":"frameshift variant-nonsense-mediated decay triggering","type":"exact"}],"termid":"SO:0002323"}


id: MONDO:0023528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome caused by Kaposi sarcoma-associated herpesvirus (KSHV) infection. It manifests with fever, weight loss, and fluid retention in the legs or abdomen. Patients are at risk of developing KSHV-related cancers including Kaposi sarcoma and lymphoma.","definition_xrefs":["NCIT:C125711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-infectious syndrome","termid":"MONDO:0021670"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KSHV inflammatory cytokine syndrome","secondary_identifiers":["MEDGEN:901443","UMLS:C4086533"],"synonyms":[{"name":"KICS","type":"exact"},{"name":"KSHV inflammatory cytokine syndrome","type":"exact"},{"name":"Kaposi-sarcoma associated Herpesvirus (KSHV) inflammatory cytokine syndrome","type":"exact"}],"termid":"MONDO:0023528","xrefs":{"Monarch":{"xref_id":"0023528"}}}


id: PBO:0031296
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-branched,_elongated,_multiseptate_cell","termid":"PBO:0031296"}


id: PBO:0074579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stannin","termid":"PBO:0074579"}


id: PBO:0004460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp43 (predicted)","termid":"PBO:0004460"}


id: GO:0018564
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 9H-carbazole + H+ + NAD(P)H + O2 = 2'-aminobiphenyl-2,3-diol + NAD(P)+.","definition_xrefs":["EC:1.14.12.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"carbazole 1,9a-dioxygenase [NAD(P)H] activity","secondary_identifiers":["UM-BBD_reactionID:r0456"],"synonyms":[{"name":"CARDO","type":"exact"},{"name":"carbazole 1,9alpha-dioxygenase activity","type":"exact"}],"termid":"GO:0018564"}


id: PBO:0056858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIA SH3 domain ER export factor 3","termid":"PBO:0056858"}


id: MONDO:0018926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Prion diseases are a group of rare transmissible disorders characterized by progressive debilitating neurological manifestations due to spongiform changes with an invariably fatal course. The disorders all involve accumulation of an abnormal prion protein in the central nervous system with no specific immunological response. Sporadic Creutzfeldt-Jakob disease (CJD) is the most frequent form accounting for about 85% of prion disease cases. The other forms of prion disease are genetic (5-15%) and include inherited CJD, fatal familial insomnia (FFI), and Familial Alzheimer-like prion disease. Acquired forms (< 5%) include iatrogenic CJD and variant CJD (vCDJ).","definition_xrefs":["Orphanet:56970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurodegenerative disease","termid":"MONDO:0005559"},{"relation_name":"is_a","term_name":"central nervous system infectious disorder","termid":"MONDO:0024619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"human prion disease","secondary_identifiers":["ICD10CM:A81.1","GARD:18851"],"synonyms":[{"name":"TSE","type":"exact"},{"name":"transmissible spongiform encephalopathy","type":"exact"}],"termid":"MONDO:0018926","xrefs":{"Monarch":{"xref_id":"0018926"}}}


id: GO:0010997
data:
  {"annotated_genes":["SJAG_01330","SJAG_04671","SJAG_03809","SJAG_04699","SJAG_00666","SJAG_04853","SJAG_03858","SJAG_00071"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88162,88423,98866,99636,101794,105811,114440,115054],"is_not":false,"summary":null,"term":"GO:0010997"}]},"cv_name":"molecular_function","definition":"Binding to an anaphase-promoting complex. A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00666":null,"SJAG_01330":null,"SJAG_03809":null,"SJAG_03858":null,"SJAG_04671":null,"SJAG_04699":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"anaphase-promoting complex binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"APC binding","type":"exact"}],"termid":"GO:0010997","terms_by_termid":{"GO:0010997":null}}


id: SOFP:symbol
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"Community symbol","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symbol","termid":"SOFP:symbol"}


id: PBO:0073495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small G protein signaling modulator 1","termid":"PBO:0073495"}


id: CHEBI:24431
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A chemical entity is a physical entity of interest in chemistry including molecular entities, parts thereof, and chemical substances.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chemical entity","termid":"CHEBI:24431"}


id: PBO:0065051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B pseudogene 5","termid":"PBO:0065051"}


id: MONDO:0015177
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Metaphyseal anadysplasia is a very rare form of metaphyseal dysplasia characterized by short stature, rhizomelic micromelia and a mild varus deformity of the legs evident from the first months of life, that is associated with radiological features of severe metaphyseal changes (irregularities, widening and marginal blurring) in long bones, most prominent in proximal femurs, and generalized osteopenia, and that usually spontaneously resolves by the age of three years. Severe autosomal dominant and milder recessive variants have been observed.","definition_xrefs":["Orphanet:1040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaphyseal anadysplasia","secondary_identifiers":["MESH:C537351","GARD:3562","SCTID:254085009","OMIM:309645","UMLS:C0432226","MEDGEN:96582","icd11.foundation:327336919","ICD9:756.9"],"synonyms":[{"name":"MAD","type":"related"},{"name":"Maroteaux Verloes Stanescu syndrome","type":"related"},{"name":"Maroteaux-Verloes-Stanescu syndrome","type":"exact"},{"name":"early-onset regressive form of metaphyseal dysplasia","type":"related"},{"name":"regressive metaphyseal dysplasia","type":"exact"}],"termid":"MONDO:0015177","xrefs":{"Monarch":{"xref_id":"0015177"}}}


