# terms

id: PBO:0055007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2422","termid":"PBO:0055007"}


id: GO:0061686
data:
  {"annotated_genes":["SJAG_00832"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103129],"is_not":false,"summary":null,"term":"GO:0061686"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteine + N-alpha,N-alpha,N-alpha-trimethyl-L-histidine (hercynine) + O2 = hercynylcysteine sulfoxide + H2O.","definition_xrefs":["PMID:24828577","GOC:dph","RHEA:42704","PMID:4276459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with oxygen as acceptor","termid":"GO:0046993"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00832":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"hercynylcysteine sulfoxide synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.21.3.10"],"synonyms":[{"name":"hercynylcysteine S-oxide synthase","type":"exact"},{"name":"hercynylcysteine sulfoxide synthase","type":"exact"}],"termid":"GO:0061686","terms_by_termid":{"GO:0061686":null}}


id: PBO:0053588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 613","termid":"PBO:0053588"}


id: PBO:0069772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1055, pseudogene","termid":"PBO:0069772"}


id: SO:1000011
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transition of a cytidine to a thymine.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine_transition","termid":"SO:1000010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_to_T_transition","synonyms":[{"name":"C to T transition","type":"exact"}],"termid":"SO:1000011"}


id: PBO:0079840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-5 family C-terminal like","termid":"PBO:0079840"}


id: PBO:0041813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coactivator associated arginine methyltransferase 1 pseudogene 1","termid":"PBO:0041813"}


id: PBO:0017488
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-positively_regulates","termid":"PBO:0017488"}


id: GO:0004751
data:
  {"annotated_genes":["SJAG_00070"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88417],"is_not":false,"summary":null,"term":"GO:0004751"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: aldehydo-D-ribose 5-phosphate = D-ribulose 5-phosphate.","definition_xrefs":["RHEA:14657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00070":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"ribose-5-phosphate isomerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-177784","MetaCyc:RIB5PISOM-RXN","Reactome:R-HSA-5660015","Reactome:R-HSA-5660013","KEGG_REACTION:R01056","EC:5.3.1.6","Reactome:R-HSA-71306"],"synonyms":[{"name":"5-phosphoribose isomerase activity","type":"exact"},{"name":"D-ribose 5-phosphate isomerase activity","type":"exact"},{"name":"D-ribose-5-phosphate aldose-ketose-isomerase activity","type":"exact"},{"name":"D-ribose-5-phosphate ketol-isomerase activity","type":"exact"},{"name":"pentose phosphate isomerase (PPI)","type":"exact"},{"name":"phosphopentoseisomerase activity","type":"exact"},{"name":"phosphopentosisomerase activity","type":"exact"},{"name":"phosphoriboisomerase activity","type":"exact"},{"name":"ribose 5-phosphate epimerase activity","type":"exact"},{"name":"ribose phosphate isomerase activity","type":"exact"}],"termid":"GO:0004751","terms_by_termid":{"GO:0004751":null}}


id: PBO:0051429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-9","termid":"PBO:0051429"}


id: PBO:0030807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cell_cortex","termid":"PBO:0030807"}


id: PBO:0059320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L57 pseudogene 3","termid":"PBO:0059320"}


id: PBO:0069115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 364, pseudogene","termid":"PBO:0069115"}


id: PBO:0113411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L24B; forms two bridges within ribosome, stimulates translation initiation and elongation; homologous to mammalian ribosomal protein L24, no bacterial homolog; RPL24B has a paralog, RPL24A, that arose from the whole genome duplication","termid":"PBO:0113411"}


id: GO:0060652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which anatomical structures of the mammary gland cord are generated and organized. Mammary gland cords form when the mammary gland bud invades the mammary fat.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial tube morphogenesis","termid":"GO:0060562"},{"relation_name":"part_of","term_name":"mammary gland duct morphogenesis","termid":"GO:0060603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland cord morphogenesis","synonyms":[{"name":"mammary gland sprout morphogenesis","type":"exact"}],"termid":"GO:0060652"}


id: GO:0102544
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-ornithinium(1+) + 2-oxoglutarate + NADPH + H+ = ornaline + NADP + H2O.","definition_xrefs":["GOC:pz","EC:1.5.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"ornaline synthase activity","secondary_identifiers":["MetaCyc:RXN-14880"],"termid":"GO:0102544"}


id: PBO:0035757
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_microtubule_nucleation_from_eMTOC","termid":"PBO:0035757"}


id: PBO:0043469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 7 pseudogene 1","termid":"PBO:0043469"}


id: GO:0031689
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an A3 adenosine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine receptor binding","termid":"GO:0031685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"A3 adenosine receptor binding","synonyms":[{"name":"A3 adenosine receptor ligand","type":"narrow"}],"termid":"GO:0031689"}


id: PBO:0062223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AR member 1","termid":"PBO:0062223"}


id: MONDO:0040502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial glucocorticoid deficiency","termid":"MONDO:0008733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucocorticoid deficiency 5","secondary_identifiers":["OMIM:617825","GARD:16257","UMLS:C4540522","MEDGEN:1614419"],"synonyms":[{"name":"GCCD5","type":"related"},{"name":"glucocorticoid deficiency 5","type":"exact"}],"termid":"MONDO:0040502","xrefs":{"Monarch":{"xref_id":"0040502"}}}


id: FYPO:0001029
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of canavanine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"resistance to canavanine","synonyms":[{"name":"resistance to canavanine during mitotic cell cycle","type":"related"},{"name":"resistance to canavanine during vegetative growth","type":"exact"},{"name":"resistant to canavanine","type":"exact"}],"termid":"FYPO:0001029"}


id: PBO:0005689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific UPF0300 family protein 6","termid":"PBO:0005689"}


id: PBO:0059073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOCS2 divergent transcript","termid":"PBO:0059073"}


id: PBO:0114070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myogenesis regulating glycosidase","termid":"PBO:0114070"}


id: GO:0004568
data:
  {"annotated_genes":["SJAG_00620"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101012],"is_not":false,"summary":null,"term":"GO:0004568"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-beta linkages of N-acetyl-D-glucosamine (GlcNAc) polymers of chitin and chitodextrins.","definition_xrefs":["GOC:kah","GOC:bf","GOC:pde","PMID:11468293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00620":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"chitinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6786421"],"termid":"GO:0004568","terms_by_termid":{"GO:0004568":null}}


id: PBO:0063439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 6B","termid":"PBO:0063439"}


id: MONDO:0001968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 46 XY gonadal dysgenesis (obsolete MONDO:0001968)","termid":"MONDO:0001968","xrefs":{"Monarch":{"xref_id":"0001968"}}}


id: PBO:0083651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endocytic site protein required for stress-induced cell elongation; may link the polarization signal with the endocytic machinery to facilitate adaptive morphogenesis under conditions of stress; interacts with the polarity regulator Cdc42p, the SH3 domains of actin patch components and actin filaments; contains a Rho-GAP domain lacking the catalytic arginine finger, PXXP motifs and an xACT (F-actin binding) motif; promoter contains a consensus binding sequence for transcription factor Abf1p","termid":"PBO:0083651"}


id: PR:O74763
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DDB1- and CUL4-associated factor 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C17D11.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D11.08","secondary_identifiers":["UniProtKB:O74763"],"synonyms":[{"name":"Spom972h-DCAF7","type":"exact"}],"termid":"PR:O74763"}


id: GO:0043628
data:
  {"annotated_genes":["SJAG_02621","SJAG_01836","SJAG_01176","SJAG_04942","SJAG_02725","SJAG_02622","SJAG_01867"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91349,92308,117617],"is_not":false,"summary":null,"term":"GO:0043628"},{"annotations":[107269,117479,117591,87851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990431"},{"annotations":[107271,117594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990432"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of a regulatory non-coding RNA molecule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA 3'-end processing","termid":"GO:0031123"},{"relation_name":"is_a","term_name":"regulatory ncRNA processing","termid":"GO:0070918"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01176":null,"SJAG_01836":null,"SJAG_01867":null,"SJAG_02621":null,"SJAG_02622":null,"SJAG_02725":null,"SJAG_04942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulatory ncRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ncRNA 3' end processing","type":"broad"},{"name":"ncRNA 3'-end processing","type":"broad"},{"name":"small regulatory ncRNA 3'-end processing","type":"narrow"}],"termid":"GO:0043628","terms_by_termid":{"GO:0043628":null,"GO:1990431":null,"GO:1990432":null}}


id: MONDO:0004524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A thyroid gland adenoma with increased cellularity and nuclear atypia. There is no capsular or vascular invasion. The clinical course is benign.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"follicular thyroid adenoma","termid":"MONDO:0005032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid gland atypical follicular adenoma","secondary_identifiers":["DOID:8292","MEDGEN:224756","NCIT:C27729","UMLS:C1266046","ICDO:8330/1"],"synonyms":[{"name":"atypical follicular adenoma","type":"exact"},{"name":"atypical follicular adenoma (morphologic abnormality)","type":"exact"},{"name":"thyroid gland atypical follicular adenoma","type":"exact"}],"termid":"MONDO:0004524","xrefs":{"Monarch":{"xref_id":"0004524"}}}


id: MONDO:0018635
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osteonecrosis","termid":"MONDO:0005380"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic phalangeal acro-osteolysis","secondary_identifiers":["MEDGEN:1803504","GARD:21860","Orphanet:444316","UMLS:C5680064"],"synonyms":[{"name":"idiopathic phalangeal acroosteolysis","type":"exact"}],"termid":"MONDO:0018635","xrefs":{"Monarch":{"xref_id":"0018635"}}}


id: PBO:0079474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twist family bHLH transcription factor 2","termid":"PBO:0079474"}


id: PBO:0109086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaxin 1 like, pseudogene","termid":"PBO:0109086"}


id: PBO:0086403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ferric reductase with similarity to Fre2p; expression induced by low copper levels","termid":"PBO:0086403"}


id: MONDO:0100040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A monogenic disease that has material basis in mutation in the FOXG1 gene.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"is_a","term_name":"pervasive developmental disorder","termid":"MONDO:0000594"},{"relation_name":"is_a","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"FOXG1 disorder","synonyms":[{"name":"FOXG1 disorder","type":"exact"},{"name":"FOXG1 inherited genetic disease","type":"exact"},{"name":"inherited genetic disease caused by mutation in FOXG1","type":"exact"}],"termid":"MONDO:0100040","xrefs":{"Monarch":{"xref_id":"0100040"}}}


id: PBO:0042036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 89","termid":"PBO:0042036"}


id: PBO:0085528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S27, no bacterial homolog; RPS27B has a paralog, RPS27A, that arose from the whole genome duplication","termid":"PBO:0085528"}


id: GO:0001722
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Low molecular weight (10-45 kDa) proteins that associate with intermediate filaments by lateral binding of the filaments and have the effect of creating tight macrofilament aggregates.","definition_xrefs":["GOC:ajp","PMID:9484600"],"gene_count":0,"genotype_count":0,"name":"obsolete type I intermediate filament associated protein (obsolete GO:0001722)","synonyms":[{"name":"type I intermediate filament associated protein","type":"exact"}],"termid":"GO:0001722"}


id: PBO:0054604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2009","termid":"PBO:0054604"}


id: PBO:0076839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TERF1 pseudogene 6","termid":"PBO:0076839"}


id: PBO:0082207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-1,2-specific exomannosidase of the endoplasmic reticulum; involved in glycan trimming of both folded and misfolded glycoproteins; complexes with Pdi1p, and trims a mannose from Man8GlcNac2 glycans to generate Man7GlcNac2, an oligosaccharide signal on glycoproteins destined for ER-associated protein degradation; requires Pdi1p for stability and substrate recognition; human homolog EDEM1 can complement yeast null mutant","termid":"PBO:0082207"}


id: PBO:0028809
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_autophosphorylation_during_cellular_response_to_DNA_damage","termid":"PBO:0028809"}


id: PBO:0026634
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K5_acetylation","termid":"PBO:0026634"}


id: GO:0062037
data:
  {"annotated_genes":["SJAG_04671"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98868],"is_not":false,"summary":null,"term":"GO:0062037"}]},"cv_name":"molecular_function","definition":"Binding to a DNA D-loop. A D-loop is a three-stranded DNA structure formed by the invasion of a single DNA strand that base pairs with one strand of duplex DNA, while the rest of the double-stranded DNA does not unwind.","definition_xrefs":["PMID:20924116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA secondary structure binding","termid":"GO:0000217"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"D-loop DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA displacement loop binding","type":"exact"}],"termid":"GO:0062037","terms_by_termid":{"GO:0062037":null}}


id: MONDO:0004303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A parathyroid gland adenoma composed predominantly of neoplastic cells with clear cytoplasm.","definition_xrefs":["NCIT:C7993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clear cell adenoma","termid":"MONDO:0003426"},{"relation_name":"is_a","term_name":"parathyroid gland adenoma","termid":"MONDO:0006890"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parathyroid gland clear cell adenoma","secondary_identifiers":["MEDGEN:83546","DOID:7609","UMLS:C0279700"],"synonyms":[{"name":"clear cell adenoma of parathyroid","type":"exact"},{"name":"clear cell adenoma of parathyroid gland","type":"exact"},{"name":"clear cell adenoma of the parathyroid","type":"exact"},{"name":"clear cell adenoma of the parathyroid gland","type":"exact"},{"name":"parathyroid clear cell adenoma","type":"exact"},{"name":"parathyroid gland clear cell adenoma","type":"exact"},{"name":"parathyroid gland transitional clear cell adenoma","type":"exact"},{"name":"parathyroid transitional clear cell adenoma","type":"exact"},{"name":"transitional clear cell adenoma of parathyroid","type":"exact"},{"name":"transitional clear cell adenoma of parathyroid gland","type":"exact"},{"name":"transitional clear cell adenoma of the parathyroid","type":"exact"},{"name":"transitional clear cell adenoma of the parathyroid gland","type":"exact"}],"termid":"MONDO:0004303","xrefs":{"Monarch":{"xref_id":"0004303"}}}


id: PBO:0074151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member E1","termid":"PBO:0074151"}


id: PBO:0001502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA ligase Trl1 (predicted)","termid":"PBO:0001502"}


id: GO:1902372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tRNA catabolic process.","definition_xrefs":["GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"regulation of tRNA catabolic process","termid":"GO:1902370"},{"relation_name":"is_a","term_name":"positive regulation of tRNA metabolic process","termid":"GO:1903328"},{"relation_name":"positively_regulates","term_name":"tRNA decay","termid":"GO:0016078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006399"},{"rel_name":"positively_regulates","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006399"],"is_obsolete":false,"name":"positive regulation of tRNA catabolic process","synonyms":[{"name":"activation of tRNA breakdown","type":"narrow"},{"name":"activation of tRNA catabolic process","type":"narrow"},{"name":"activation of tRNA catabolism","type":"narrow"},{"name":"activation of tRNA degradation","type":"narrow"},{"name":"positive regulation of tRNA breakdown","type":"exact"},{"name":"positive regulation of tRNA catabolism","type":"exact"},{"name":"positive regulation of tRNA degradation","type":"exact"},{"name":"up regulation of tRNA breakdown","type":"exact"},{"name":"up regulation of tRNA catabolic process","type":"exact"},{"name":"up regulation of tRNA catabolism","type":"exact"},{"name":"up regulation of tRNA degradation","type":"exact"},{"name":"up-regulation of tRNA breakdown","type":"exact"},{"name":"up-regulation of tRNA catabolic process","type":"exact"},{"name":"up-regulation of tRNA catabolism","type":"exact"},{"name":"up-regulation of tRNA degradation","type":"exact"},{"name":"upregulation of tRNA breakdown","type":"exact"},{"name":"upregulation of tRNA catabolic process","type":"exact"},{"name":"upregulation of tRNA catabolism","type":"exact"},{"name":"upregulation of tRNA degradation","type":"exact"}],"termid":"GO:1902372"}


id: GO:0071376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a corticotropin-releasing hormone stimulus. Corticotropin-releasing hormone is a peptide hormone involved in the stress response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to corticotropin-releasing hormone","termid":"GO:0043435"},{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to corticotropin-releasing hormone stimulus","synonyms":[{"name":"cellular response to CRF stimulus","type":"exact"},{"name":"cellular response to CRH stimulus","type":"exact"},{"name":"cellular response to corticoliberin stimulus","type":"exact"},{"name":"cellular response to corticotropin-releasing factor stimulus","type":"exact"}],"termid":"GO:0071376"}


id: GO:0102438
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: laricitrin(1-) + S-adenosyl-L-methionine = H+ + 3',4'-dimethylmyricetin + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete laricitrin 4'-O-methyltransferase activity (obsolete GO:0102438)","termid":"GO:0102438"}


id: PR:O74360
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rga4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho-type GTPase-activating protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28E12.03","synonyms":[{"name":"Spom972h-rga4","type":"exact"}],"termid":"PR:O74360"}


id: PBO:0113461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the CoA-Synthesizing Protein Complex (CoA-SPC); subunits of this complex are: Cab2p, Cab3p, Cab4p, Cab5p, Sis2p and Vhs3p; probable dephospho-CoA kinase (DPCK) that catalyzes the last step in coenzyme A biosynthesis; involved in histone acylation; null mutant lethality is complemented by human homologs DCAKD and COASY and by E. coli coaE (encoding DPCK); extrinsic component of the mitochondrial outer membrane that also localizes to lipid droplets","termid":"PBO:0113461"}


id: MONDO:0020300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A seizure disorder characterized by intermittent dystonia and/or choreoathetoid movements that occur during sleep. The clusters of nocturnal motor seizures are often stereotyped and brief.","definition_xrefs":["Orphanet:98784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frontal lobe epilepsy","termid":"MONDO:0002612"},{"relation_name":"is_a","term_name":"familial partial epilepsy","termid":"MONDO:0017704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"autosomal dominant nocturnal frontal lobe epilepsy","secondary_identifiers":["GARD:11918","DOID:0060681","MEDGEN:777188","MESH:C579932","UMLS:C3696898","ICD9:345.80","icd11.foundation:1004734747","SCTID:698021005"],"synonyms":[{"name":"ADNFLE","type":"exact"},{"name":"ENFL","type":"exact"}],"termid":"MONDO:0020300","xrefs":{"Monarch":{"xref_id":"0020300"}}}


id: FYPO:0000087
data:
  {"alleles_by_uniquename":{"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119086],"is_not":false,"summary":null,"term":"FYPO:0000087"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to hydrogen peroxide. Cells stop growing (and may die) at a concentration of hydrogen peroxide that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damaging agents","termid":"FYPO:0000266"},{"relation_name":"is_a","term_name":"sensitive to oxidative stress","termid":"FYPO:0000726"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04312":null},"genotype_count":1,"genotypes_by_uniquename":{"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to hydrogen peroxide","references_by_uniquename":{"PMID:27678009":null},"single_locus_annotated_genes":["SJAG_04312"],"single_locus_genotype_uniquenames":["pka1delta"],"synonyms":[{"name":"hypersensitive to hydrogen peroxide","type":"exact"},{"name":"sensitive to H2O2","type":"exact"},{"name":"sensitive to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"sensitive to hydrogen peroxide during vegetative growth","type":"exact"}],"termid":"FYPO:0000087","terms_by_termid":{"FYPO:0000087":null}}


id: PBO:0030928
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_citrate_(Si)-synthase_activity","termid":"PBO:0030928"}


id: GO:0003700
data:
  {"annotated_genes":["SJAG_02938","SJAG_05288","SJAG_05153","SJAG_03735","SJAG_03388","SJAG_04839","SJAG_03911","SJAG_04712","SJAG_02752","SJAG_00979","SJAG_01343","SJAG_00304","SJAG_00163","SJAG_03519","SJAG_04584","SJAG_02472","SJAG_04009","SJAG_00802","SJAG_03484","SJAG_02709","SJAG_00386","SJAG_02810","SJAG_04036","SJAG_01307","SJAG_00926","SJAG_02218","SJAG_04421","SJAG_02048","SJAG_04388","SJAG_04813","SJAG_05006","SJAG_02138","SJAG_06576","SJAG_01441","SJAG_01725","SJAG_05337","SJAG_02149","SJAG_04373","SJAG_04191","SJAG_00210","SJAG_04374","SJAG_05234","SJAG_02311","SJAG_05247","SJAG_01583","SJAG_01694","SJAG_00037","SJAG_00693","SJAG_03538","SJAG_05343","SJAG_03143","SJAG_02730","SJAG_06599","SJAG_03473","SJAG_00987","SJAG_00266","SJAG_02406","SJAG_04749","SJAG_03241","SJAG_00664","SJAG_02898","SJAG_04092","SJAG_00073","SJAG_04855","SJAG_03879","SJAG_01740","SJAG_01916","SJAG_02052","SJAG_02922","SJAG_01930","SJAG_00124","SJAG_04249","SJAG_01062","SJAG_02326","SJAG_01243","SJAG_03183","SJAG_03346","SJAG_02252","SJAG_01532","SJAG_00698","SJAG_02956","SJAG_03918","SJAG_02569","SJAG_00792"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66699,67837,71576,72253,96066,108538,117566],"is_not":false,"summary":null,"term":"GO:0003700"},{"annotations":[108843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001216"},{"annotations":[107466,108678,109186,111374,113179,95774,106544,113582,104277,92781,99308,116987,87507,96790,108679,108537,87436,110216,93198,94228,97921,111414,103949,115572,88268,105601,95179,114078,115969,92234,99004,99996,117565,89575,101783,108295,97606,105334,107068,87933,91399,88517,88942,111413,87072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001228"},{"annotations":[99622,97020,97021,92725,97019,96548,95180,97022,92235,103057,102201,108844,110217,107710,97023,117851,57114,91951,103950,110550,103956,96418,96867,114329,110358,110391,101549,110375,87877,115131,101732,95530,96067,65940,116105,108124,112901,100988,105602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000981"},{"annotations":[93547,94211,79923,103951,108296,105745,115573,92782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001227"},{"annotations":[95879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106250"}]},"cv_name":"molecular_function","definition":"A transcription regulator activity that modulates transcription of gene sets via selective and non-covalent binding to a specific double-stranded genomic DNA sequence (sometimes referred to as a motif) within a cis-regulatory region. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.","definition_xrefs":["GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator activity","termid":"GO:0140110"}],"gene_count":84,"genes_by_uniquename":{"SJAG_00037":null,"SJAG_00073":null,"SJAG_00124":null,"SJAG_00163":null,"SJAG_00210":null,"SJAG_00266":null,"SJAG_00304":null,"SJAG_00386":null,"SJAG_00664":null,"SJAG_00693":null,"SJAG_00698":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00926":null,"SJAG_00979":null,"SJAG_00987":null,"SJAG_01062":null,"SJAG_01243":null,"SJAG_01307":null,"SJAG_01343":null,"SJAG_01441":null,"SJAG_01532":null,"SJAG_01583":null,"SJAG_01694":null,"SJAG_01725":null,"SJAG_01740":null,"SJAG_01916":null,"SJAG_01930":null,"SJAG_02048":null,"SJAG_02052":null,"SJAG_02138":null,"SJAG_02149":null,"SJAG_02218":null,"SJAG_02252":null,"SJAG_02311":null,"SJAG_02326":null,"SJAG_02406":null,"SJAG_02472":null,"SJAG_02569":null,"SJAG_02709":null,"SJAG_02730":null,"SJAG_02752":null,"SJAG_02810":null,"SJAG_02898":null,"SJAG_02922":null,"SJAG_02938":null,"SJAG_02956":null,"SJAG_03143":null,"SJAG_03183":null,"SJAG_03241":null,"SJAG_03346":null,"SJAG_03388":null,"SJAG_03473":null,"SJAG_03484":null,"SJAG_03519":null,"SJAG_03538":null,"SJAG_03735":null,"SJAG_03879":null,"SJAG_03911":null,"SJAG_03918":null,"SJAG_04009":null,"SJAG_04036":null,"SJAG_04092":null,"SJAG_04191":null,"SJAG_04249":null,"SJAG_04373":null,"SJAG_04374":null,"SJAG_04388":null,"SJAG_04421":null,"SJAG_04584":null,"SJAG_04712":null,"SJAG_04749":null,"SJAG_04813":null,"SJAG_04839":null,"SJAG_04855":null,"SJAG_05006":null,"SJAG_05153":null,"SJAG_05234":null,"SJAG_05247":null,"SJAG_05288":null,"SJAG_05337":null,"SJAG_05343":null,"SJAG_06576":null,"SJAG_06599":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140110","GO:0003674"],"is_obsolete":false,"name":"DNA-binding transcription factor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0001204","GO:0001071","GO:0001130","GO:0001199","GO:0001131","GO:0000130","GO:0001151","Reactome:R-HSA-163666"],"synonyms":[{"name":"DNA binding transcription factor activity","type":"exact"},{"name":"bacterial-type DNA binding transcription factor activity","type":"narrow"},{"name":"bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity","type":"narrow"},{"name":"bacterial-type RNA polymerase transcription enhancer sequence-specific DNA binding transcription factor activity","type":"narrow"},{"name":"bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding","type":"narrow"},{"name":"gene-specific transcription factor activity","type":"exact"},{"name":"metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity","type":"narrow"},{"name":"metal ion regulated sequence-specific DNA binding transcription factor activity","type":"narrow"},{"name":"nucleic acid binding transcription factor activity","type":"broad"},{"name":"sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity","type":"narrow"},{"name":"sequence-specific DNA binding transcription factor activity","type":"exact"},{"name":"transcription factor activity","type":"broad"},{"name":"transcription factor activity, bacterial-type RNA polymerase core promoter proximal region sequence-specific binding","type":"narrow"},{"name":"transcription factor activity, bacterial-type RNA polymerase proximal promoter sequence-specific DNA binding","type":"narrow"},{"name":"transcription factor activity, bacterial-type RNA polymerase transcription enhancer sequence-specific binding","type":"narrow"},{"name":"transcription factor activity, metal ion regulated sequence-specific DNA binding","type":"narrow"}],"termid":"GO:0003700","terms_by_termid":{"GO:0000981":null,"GO:0001216":null,"GO:0001227":null,"GO:0001228":null,"GO:0003700":null,"GO:0106250":null}}


id: MONDO:0003515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A teratoma that arises from the fallopian tube. It is a rare tumor, often found incidentally.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teratoma","termid":"MONDO:0002601"},{"relation_name":"is_a","term_name":"fallopian tube germ cell tumor","termid":"MONDO:0003392"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fallopian tube teratoma","secondary_identifiers":["UMLS:C1517127","NCIT:C40131","MEDGEN:309129","DOID:5564"],"synonyms":[{"name":"fallopian tube teratoma","type":"exact"}],"termid":"MONDO:0003515","xrefs":{"Monarch":{"xref_id":"0003515"}}}


id: GO:0009292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The introduction of genetic information into a cell to create a genetically different individual, without production of new individuals.","definition_xrefs":["PMID:26184597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"horizontal gene transfer","synonyms":[{"name":"genetic exchange","type":"broad"},{"name":"genetic transfer","type":"exact"},{"name":"lateral gene transfer","type":"exact"}],"termid":"GO:0009292"}


id: PBO:0085170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oleate-activated transcription factor; subunit of a heterodimeric complex with Pip2p, which binds to oleate-response elements (ORE) in the promoter of genes involved in beta-oxidation of fatty acids, peroxisome organization and biogenesis, activating transcription in the presence of oleate; regulates chromatin silencing at telomeres; involved in diauxic shift; OAF1 has a paralog, PIP2, that arose from the whole genome duplication","termid":"PBO:0085170"}


id: MONDO:0023101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facio digito genital syndrome recessive form","termid":"MONDO:0023101","xrefs":{"Monarch":{"xref_id":"0023101"}}}


id: MONDO:0018596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Systemic polyarteritis nodosa (PAN) is a chronic systemic necrotizingvasculitis of adults and childrenaffecting small- and medium-sized vessels and characterized by formation of microaneurysms leading to serious generalized disease and multi-organ involvement.","definition_xrefs":["Orphanet:439762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary polyarteritis nodosa","termid":"MONDO:0018593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic polyarteritis nodosa","secondary_identifiers":["GARD:21833"],"synonyms":[{"name":"systemic PAN","type":"exact"},{"name":"systemic periarteritis nodosa","type":"exact"}],"termid":"MONDO:0018596","xrefs":{"Monarch":{"xref_id":"0018596"}}}


id: MOD:00214
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-serine residue to the polymer dermatan 4-sulfate by a D-glucuronosyl-D-galactosyl-D-galactosyl-D-xylosyl tetrasaccharide.","definition_xrefs":["RESID:AA0209","PubMed:3472204","PubMed:2914936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-serine","termid":"MOD:00002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"dermatan 4-sulfate D-glucuronosyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine","synonyms":[{"name":"beta-heparin","type":"exact"},{"name":"chondroitin sulfate B","type":"exact"},{"name":"dermatan 4-sulfate D-glucuronosyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine","type":"exact"},{"name":"poly[beta-1,4-L-idopyranuronosyl-alpha-1,3-(2-acetamido-2-deoxy-4-sulfate D-galactosyl)]-beta-1,4-D-glucopyranuronosyl-beta-1,3-D-galactosyl-beta-1,3-D-galactosyl-beta-1,4-D-xylosyl-beta-1,3-L-serine","type":"exact"}],"termid":"MOD:00214"}


id: GO:1900132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of lipid binding.","definition_xrefs":["GOC:TermGenie","GOC:pm"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of lipid binding (obsolete GO:1900132)","synonyms":[{"name":"activation of lipid binding","type":"narrow"},{"name":"up regulation of lipid binding","type":"exact"},{"name":"up-regulation of lipid binding","type":"exact"},{"name":"upregulation of lipid binding","type":"exact"}],"termid":"GO:1900132"}


id: PBO:0114412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific microprotein Tam11","termid":"PBO:0114412"}


id: GO:1901704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-glutamine.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamine biosynthetic process","termid":"GO:0006542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-glutamine biosynthetic process","synonyms":[{"name":"L-glutamine anabolism","type":"exact"},{"name":"L-glutamine biosynthesis","type":"exact"},{"name":"L-glutamine formation","type":"exact"},{"name":"L-glutamine synthesis","type":"exact"}],"termid":"GO:1901704"}


id: MONDO:0022430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cardiopulmonary disorder characterized by systemic arterial hypoxemia secondary to pulmonary hypertension and extrapulmonary right to left shunting across the foramen ovale and ductus arteriosus.","definition_xrefs":["NCIT:C85006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of cardiovascular system","termid":"MONDO:0024239"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent fetal circulation syndrome","secondary_identifiers":["SCTID:206597007","SCTID:233815004","SCTID:35604006","UMLS:C0031190","EFO:1001103","MEDGEN:45824","MESH:D010547"],"synonyms":[{"name":"PPHN","type":"exact"},{"name":"persistent fetal circulation","type":"exact"},{"name":"persistent foetal circulation","type":"exact"},{"name":"persistent pulmonary hypertension of the newborn","type":"exact"}],"termid":"MONDO:0022430","xrefs":{"Monarch":{"xref_id":"0022430"}}}


id: PBO:0045648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 6","termid":"PBO:0045648"}


id: PBO:0048531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem nuclear organelle associated protein 7","termid":"PBO:0048531"}


id: PBO:0039729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein C1","termid":"PBO:0039729"}


id: PBO:0054328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1721","termid":"PBO:0054328"}


id: GO:1990343
data:
  {"annotated_genes":["SJAG_01601"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[118858],"is_not":false,"summary":null,"term":"GO:1990343"}]},"cv_name":"cellular_component","definition":"A region of heterochromatin that is formed dynamically under specific growth conditions by a process that requires RNAi, and is enriched in histone H3 methylated on lysine 9 (H3K9me).","definition_xrefs":["PMID:23151475","PMID:24210919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin","termid":"GO:0000792"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01601":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"heterochromatin domain","references_by_uniquename":{"PMID:32109380":null},"synonyms":[{"name":"HOOD","type":"exact"}],"termid":"GO:1990343","terms_by_termid":{"GO:1990343":null}}


id: PBO:0046538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group E member 1","termid":"PBO:0046538"}


id: PBO:0029413
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_mitotic_G2/M_transition","termid":"PBO:0029413"}


id: PBO:0114279
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologus to S. cerevisiae YOR350C","termid":"PBO:0114279"}


id: PBO:0077519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 234","termid":"PBO:0077519"}


id: MONDO:0012940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome 20q13.","definition_xrefs":["PMID:18758464","DOID:0110908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"inflammatory bowel disease 24","secondary_identifiers":["MEDGEN:393404","OMIM:612566","MESH:C567252","UMLS:C2675509"],"synonyms":[{"name":"IBD24","type":"exact"},{"name":"inflammatory bowel disease 24","type":"exact"},{"name":"inflammatory bowel disease type 24","type":"exact"}],"termid":"MONDO:0012940","xrefs":{"Monarch":{"xref_id":"0012940"}}}


id: PBO:0044817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 108F (pseudogene)","termid":"PBO:0044817"}


id: PBO:0077894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taperin","termid":"PBO:0077894"}


id: GO:0007492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endoderm development","termid":"GO:0007492"}


id: GO:0042629
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Coarse, bluish-black staining cytoplasmic granules, bounded by a plasma membrane and found in mast cells and basophils. Contents include histamine, heparin, chondroitin sulfates, chymase and tryptase.","definition_xrefs":["GOC:jl","PMID:12360215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005773"],"is_obsolete":false,"name":"mast cell granule","termid":"GO:0042629"}


id: PBO:0028134
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_snoRNA_primary_transcript_level","termid":"PBO:0028134"}


id: PBO:0034643
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_cellular_response_to_arsenite_ion","termid":"PBO:0034643"}


id: GO:0070569
data:
  {"annotated_genes":["SJAG_02370","SJAG_01089","SJAG_02383","SJAG_02954","SJAG_01443","SJAG_02178"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91160,90268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050265"},{"annotations":[113208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008108"},{"annotations":[102193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003977"},{"annotations":[113939,72040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003983"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an uridylyl group to an acceptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01089":null,"SJAG_01443":null,"SJAG_02178":null,"SJAG_02370":null,"SJAG_02383":null,"SJAG_02954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016779","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"uridylyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"uridyl transferase activity","type":"exact"},{"name":"uridyltransferase activity","type":"exact"}],"termid":"GO:0070569","terms_by_termid":{"GO:0003977":null,"GO:0003983":null,"GO:0008108":null,"GO:0050265":null}}


id: MONDO:0008640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lymphocytic vasculitis is one of several skin conditions which are collectively referred to as cutaneous vasculitis. In lymphocytic vasculitis, white blood cells (lymphocytes) cause damage to blood vessels in the skin. This condition is thought to be caused by a number of factors, but the exact cause of most cases is not known. This disease can present with a variety of symptoms, depending on the size, location, and severity of the affected area. In a minority of patients, cutaneous vasculitis can be part of a more severe vasculitis affecting other organs in the body - this is known as systemic vasculitis.","definition_xrefs":["GARD:0006941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasculitis","termid":"MONDO:0018882"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"vasculitis, lymphocytic, nodular","secondary_identifiers":["GARD:6941","MEDGEN:348635","OMIM:192310","MESH:C566008","UMLS:C1860519"],"synonyms":[{"name":"lymphocytic vasculitis","type":"related"},{"name":"vasculitis lymphocytic, nodular","type":"related"},{"name":"vasculitis, lymphocytic, nodular","type":"exact"}],"termid":"MONDO:0008640","xrefs":{"Monarch":{"xref_id":"0008640"}}}


id: GO:0071958
data:
  {"annotated_genes":["SJAG_00333","SJAG_02246","SJAG_04461","SJAG_03376","SJAG_04468","SJAG_05196","SJAG_02232","SJAG_03936","SJAG_04140","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90618,99354,100440,101854,102312,104846,105872,106630,110010,110681],"is_not":false,"summary":null,"term":"GO:0071958"}]},"cv_name":"cellular_component","definition":"The spindle pole body that is formed by spindle pole body duplication, and to which proteins involved in mitotic exit signaling (for example, the septation initiation network in fission yeast) localize.","definition_xrefs":["GOC:mah","GOC:vw","PMID:15132994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic spindle pole body","termid":"GO:0044732"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00333":null,"SJAG_02232":null,"SJAG_02246":null,"SJAG_03048":null,"SJAG_03376":null,"SJAG_03936":null,"SJAG_04140":null,"SJAG_04461":null,"SJAG_04468":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005816"}],"interesting_parent_ids":["GO:0015630","GO:0005575","GO:0005816"],"is_obsolete":false,"name":"new mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"new SPB","type":"exact"}],"termid":"GO:0071958","terms_by_termid":{"GO:0071958":null}}


id: PBO:0090466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Ste11","termid":"PBO:0090466"}


id: FYPO:0001534
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of zinc ion measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular zinc level","synonyms":[{"name":"decreased cellular zinc ion level","type":"exact"},{"name":"decreased cellular zinc level during mitotic cell cycle","type":"related"},{"name":"decreased cellular zinc level during vegetative growth","type":"exact"},{"name":"decreased zinc accumulation","type":"related"},{"name":"reduced cellular zinc level","type":"exact"}],"termid":"FYPO:0001534"}


id: PBO:0086603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression is regulated by Msn2p/Msn4p, indicating a possible role in stress response","termid":"PBO:0086603"}


id: PBO:0063779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHF5A pseudogene 6","termid":"PBO:0063779"}


id: PBO:0043432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNIH3 antisense RNA 1","termid":"PBO:0043432"}


id: GO:0044782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cilium, a specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole.","definition_xrefs":["GOC:cilia","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"},{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection organization","termid":"GO:0120036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cilium organization","synonyms":[{"name":"microtubule-based flagellum organization","type":"exact"}],"termid":"GO:0044782"}


id: MONDO:0031071
data:
  {"annotated_genes":["SJAG_01621"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85259],"is_not":false,"summary":null,"term":"MONDO:0031071"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Diamond-Blackfan anemia","termid":"MONDO:0015253"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"Diamond-Blackfan anemia 21","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620072","UMLS:C5774230","MEDGEN:1824003"],"synonyms":[{"name":"DBA21","type":"exact"},{"name":"diamond-blackfan anaemia 21","type":"exact"},{"name":"diamond-blackfan anemia 21","type":"exact"}],"termid":"MONDO:0031071","terms_by_termid":{"MONDO:0031071":null},"xrefs":{"Monarch":{"xref_id":"0031071"}}}


id: GO:0141174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont inhibits or disrupts anti-inflammatory cytokine signaling in the host organism, either by disruption of production, sequesteration, or destruction of at least one component of the signaling pathway.  Anti-inflammatory cytokines include: interleukin (IL)-1, IL-4, IL-6, IL-10, IL-11, and IL-13. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:29720526","PMID:19168731","PMID:32754056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host receptor-mediated signal transduction","termid":"GO:0075109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host anti-inflammatory cytokine signaling","synonyms":[{"name":"negative regulation by symbiont of host anti-inflammatory cytokine production","type":"exact"},{"name":"suppression by symbiont of host anti-inflammatory cytokine production","type":"exact"},{"name":"suppression by symbiont of host anti-inflammatory cytokine secretion","type":"related"},{"name":"symbiont-mediated degradation of host anti-inflammatory cytokine","type":"narrow"},{"name":"symbiont-mediated sequestering of host anti-inflammatory cytokine","type":"related"},{"name":"symbiont-mediated suppression of host anti-inflammatory cytokine production","type":"related"}],"termid":"GO:0141174"}


id: GO:0044167
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding the host cell endoplasmic reticulum.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"},{"relation_name":"part_of","term_name":"host cell endomembrane system","termid":"GO:0033645"},{"relation_name":"part_of","term_name":"host cell endoplasmic reticulum","termid":"GO:0044165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell endoplasmic reticulum membrane","synonyms":[{"name":"host endoplasmic reticulum membrane","type":"exact"}],"termid":"GO:0044167"}


id: PBO:0075034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-45","termid":"PBO:0075034"}


id: PBO:0078181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 2-5","termid":"PBO:0078181"}


id: GO:0099703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The induction of synaptic vesicle release by any process that leads to a rise in intracellular calcium ion concentration at the presynapse. This is the first step in synaptic transmission.","definition_xrefs":["GOC:dos","ISBN:9780071120005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"presynaptic modulation of chemical synaptic transmission","termid":"GO:0099171"},{"relation_name":"is_a","term_name":"positive regulation of presynaptic cytosolic calcium concentration","termid":"GO:0099533"},{"relation_name":"is_a","term_name":"positive regulation of synaptic vesicle exocytosis","termid":"GO:2000302"},{"relation_name":"part_of","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"induction of synaptic vesicle exocytosis by positive regulation of presynaptic cytosolic calcium ion concentration","termid":"GO:0099703"}


id: GO:0019413
data:
  {"annotated_genes":["SJAG_03786"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100362],"is_not":false,"summary":null,"term":"GO:0019413"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of acetate, the anion of acetic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate metabolic process","termid":"GO:0006083"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03786":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"acetate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"acetate anabolism","type":"exact"},{"name":"acetate biosynthesis","type":"exact"},{"name":"acetate formation","type":"exact"},{"name":"acetate synthesis","type":"exact"}],"termid":"GO:0019413","terms_by_termid":{"GO:0019413":null}}


id: GO:0010716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of extracellular matrix disassembly. Extracellular matrix disassembly is a process that results in the breakdown of the extracellular matrix.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extracellular matrix disassembly","termid":"GO:0010715"},{"relation_name":"is_a","term_name":"negative regulation of extracellular matrix organization","termid":"GO:1903054"},{"relation_name":"negatively_regulates","term_name":"extracellular matrix disassembly","termid":"GO:0022617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of extracellular matrix disassembly","synonyms":[{"name":"down regulation of extracellular matrix disassembly","type":"exact"},{"name":"down-regulation of extracellular matrix disassembly","type":"exact"},{"name":"downregulation of extracellular matrix disassembly","type":"exact"},{"name":"inhibition of extracellular matrix disassembly","type":"narrow"},{"name":"negative regulation of extracellular matrix breakdown","type":"exact"},{"name":"negative regulation of extracellular matrix degradation","type":"exact"}],"termid":"GO:0010716"}


id: PBO:0078740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 2 homolog A","termid":"PBO:0078740"}


id: PBO:0071352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 11","termid":"PBO:0071352"}


id: MONDO:0971033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A thyroid gland carcinoma composed of groups of carcinoma cells with thymic epithelial differentiation.","definition_xrefs":["DOID:0081457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland carcinoma","termid":"MONDO:0015075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"intrathyroid thymic carcinoma","termid":"MONDO:0971033","xrefs":{"Monarch":{"xref_id":"0971033"}}}


id: PBO:0047125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 168 member B","termid":"PBO:0047125"}


id: PBO:0062991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphofurin acidic cluster sorting protein 2","termid":"PBO:0062991"}


id: PBO:0039406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase promoting complex subunit 10","termid":"PBO:0039406"}


id: FYPO:0004284
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of oxanine DNA N-glycosylase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal oxanine DNA N-glycosylase activity","termid":"FYPO:0004283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased oxanine DNA N-glycosylase activity","synonyms":[{"name":"reduced oxanine DNA N-glycosylase activity","type":"exact"}],"termid":"FYPO:0004284"}


id: PBO:0034267
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_latent_homology_relationship_with","termid":"PBO:0034267"}


id: GO:0008296
data:
  {"annotated_genes":["SJAG_01163","SJAG_05373","SJAG_02908","SJAG_02818","SJAG_00377","SJAG_02298"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104725,108600],"is_not":false,"summary":null,"term":"GO:0008296"},{"annotations":[88027,109450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008311"},{"annotations":[88030,106848,100642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008310"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of a DNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-5' exonuclease activity","termid":"GO:0008408"},{"relation_name":"is_a","term_name":"DNA exonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016895"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00377":null,"SJAG_01163":null,"SJAG_02298":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787","GO:0140097","GO:0004527"],"is_obsolete":false,"name":"3'-5'-DNA exonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9023943"],"synonyms":[{"name":"3'-5' exodeoxyribonuclease activity","type":"exact"},{"name":"3'-5'-exodeoxyribonuclease activity","type":"exact"}],"termid":"GO:0008296","terms_by_termid":{"GO:0008296":null,"GO:0008310":null,"GO:0008311":null}}


id: FYPO:0001787
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of sterol binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal lipid binding","termid":"FYPO:0006942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal sterol binding","synonyms":[{"name":"normal cholesterol binding","type":"narrow"},{"name":"normal ergosterol binding","type":"narrow"}],"termid":"FYPO:0001787"}


id: GO:0036393
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: thiocyanate (SCN-) + hydrogen peroxide (H2O2) = hypothiocyanite (OSCN-) + 2 H2O. Catalyzes the hydrogen peroxide oxidation of thiocyanate.","definition_xrefs":["GOC:pm","PMID:12626341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"thiocyanate peroxidase activity","synonyms":[{"name":"lactoperoxidase activity","type":"broad"}],"termid":"GO:0036393"}


id: GO:0019382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of carbon tetrachloride, a toxic, carcinogenic compound which is used as a general solvent in industrial degreasing operations. It is also used as grain fumigant and a chemical intermediate in the production of refrigerants.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon tetrachloride metabolic process","termid":"GO:0018885"},{"relation_name":"is_a","term_name":"halogenated hydrocarbon catabolic process","termid":"GO:0042206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carbon tetrachloride catabolic process","synonyms":[{"name":"carbon tetrachloride breakdown","type":"exact"},{"name":"carbon tetrachloride catabolism","type":"exact"},{"name":"carbon tetrachloride degradation","type":"exact"}],"termid":"GO:0019382"}


id: MONDO:0011085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Charcot-Marie-Tooth disease type 4D (CMT4D) is a subtype of Charcot-Marie-Tooth disease type 4 characterized by a childhood-onset of severe, progressive, demyelinating sensorimotor neuropathy manifesting with distal muscle weakness and atrophy, sensorineural hearing impairment leading to deafness (usually in third decade), severely reduced nerve conduction velocities, and skeletal, especially foot, deformities. Tongue atrophy has also been reported.","definition_xrefs":["Orphanet:99950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 4","termid":"MONDO:0018995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 4D","secondary_identifiers":["DOID:0110186","icd11.foundation:616686295","UMLS:C1832334","MEDGEN:371304","OMIM:601455","SCTID:715798007","GARD:3973","MESH:C535716"],"synonyms":[{"name":"CMT4D","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 4 caused by mutation in NDRG1","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 4D","type":"exact"},{"name":"Charcot-Marie-Tooth disease, demyelinating, autosomal recessive, type 4D","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 4D","type":"related"},{"name":"Charcot-Marie-Tooth neuropathy type 4D","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 4D","type":"related"},{"name":"HMSN Lom type","type":"exact"},{"name":"HMSN, Lom type","type":"exact"},{"name":"HMSN-Lom","type":"exact"},{"name":"HMSN4D","type":"exact"},{"name":"HMSNL","type":"exact"},{"name":"NDRG1 Charcot-Marie-Tooth disease type 4","type":"exact"},{"name":"NMSL","type":"related"},{"name":"autosomal recessive demyelinating Charcot-Marie-Tooth disease type 4D","type":"exact"},{"name":"hereditary motor ABD sensory neuropathy Lom type","type":"exact"},{"name":"hereditary motor and sensory neuropathy, Lom type","type":"exact"},{"name":"neuropathy, hereditary motor and sensory, Lom type","type":"related"}],"termid":"MONDO:0011085","xrefs":{"Monarch":{"xref_id":"0011085"}}}


id: GO:0044452
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a nucleolus, a small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleolar part (obsolete GO:0044452)","synonyms":[{"name":"nucleolus component","type":"exact"}],"termid":"GO:0044452"}


id: PBO:0016125
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this gene is located in the silent mating type region, it is only transcribed when at the mat1 locus, see mat1-Mc","termid":"PBO:0016125"}


id: MONDO:0015179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete intestinal disease due to vitamin absorption anomaly (obsolete MONDO:0015179)","secondary_identifiers":["Orphanet:104004"],"termid":"MONDO:0015179","xrefs":{"Monarch":{"xref_id":"0015179"}}}


id: MONDO:0013876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any skin basal cell carcinoma in which the cause of the disease is a mutation in the TP53 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"basal cell carcinoma, susceptibility to","termid":"MONDO:0100047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basal cell carcinoma, susceptibility to, 7","secondary_identifiers":["MEDGEN:766520","OMIM:614740","UMLS:C3553606"],"synonyms":[{"name":"BCC7","type":"related"},{"name":"TP53 skin basal cell carcinoma","type":"exact"},{"name":"basal cell carcinoma 7","type":"exact"},{"name":"basal cell carcinoma, susceptibility to, 7","type":"exact"},{"name":"basal cell carcinoma, susceptibility to, type 7","type":"exact"},{"name":"skin basal cell carcinoma caused by mutation in TP53","type":"exact"},{"name":"susceptibility to basal cell carcinoma 7","type":"related"}],"termid":"MONDO:0013876","xrefs":{"Monarch":{"xref_id":"0013876"}}}


id: GO:0051738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to xanthophylls, any of several neutral yellow to orange carotenoid pigments containing oxygen.","definition_xrefs":["ISBN:0122146743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid binding","termid":"GO:0019840"},{"relation_name":"is_a","term_name":"pigment binding","termid":"GO:0031409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"xanthophyll binding","termid":"GO:0051738"}


id: MONDO:0014092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schizophrenia that has material basis in a mutation of SLC1A1 on chromosome 9p24.2.","definition_xrefs":["DOID:0070093"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"schizophrenia","termid":"MONDO:0005090"},{"relation_name":"is_a","term_name":"schizophrenia, susceptibility to","termid":"MONDO:0100182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schizophrenia 18","secondary_identifiers":["MEDGEN:815243","UMLS:C3808913","OMIM:615232"],"synonyms":[{"name":"SCZD18","type":"exact"},{"name":"chromosome 7q36.3 Duplication syndrome, 362-Kb","type":"exact"},{"name":"schizoaffective disorder","type":"related"},{"name":"schizophrenia 18","type":"exact"},{"name":"schizophrenia 18 with or without an affective disorder","type":"related"},{"name":"schizophrenia susceptibility 18","type":"exact"},{"name":"schizophrenia type 18","type":"exact"}],"termid":"MONDO:0014092","xrefs":{"Monarch":{"xref_id":"0014092"}}}


id: PBO:0075206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 18","termid":"PBO:0075206"}


id: MONDO:0018857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous myiasis","termid":"MONDO:0020568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"creeping myiasis","secondary_identifiers":["MedDRA:10059547","SCTID:417441005","icd11.foundation:1282509430","GARD:1609","MEDGEN:287068","MESH:D007815","Orphanet:504","UMLS:C1562462"],"synonyms":[{"name":"migratory myiasis","type":"exact"}],"termid":"MONDO:0018857","xrefs":{"Monarch":{"xref_id":"0018857"}}}


id: PR:O74803
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UV excision repair protein RAD23 homolog B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UV excision repair protein rhp23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.12","secondary_identifiers":["UniProtKB:O74803"],"synonyms":[{"name":"RAD23 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC2D10.12","type":"related"},{"name":"Spom972h-RAD23B","type":"exact"}],"termid":"PR:O74803"}


id: PBO:0052566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase 2C pseudogene 3","termid":"PBO:0052566"}


id: GO:0006218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of uridine, uracil riboside, a ribonucleoside very widely distributed but occurring almost entirely as phosphoric esters in ribonucleotides and ribonucleic acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uridine metabolic process","termid":"GO:0046108"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside catabolic process","termid":"GO:0046133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"uridine catabolic process","synonyms":[{"name":"uridine breakdown","type":"exact"},{"name":"uridine catabolism","type":"exact"},{"name":"uridine degradation","type":"exact"}],"termid":"GO:0006218"}


id: MONDO:0016551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital primary megaureter","termid":"MONDO:0018960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"congenital primary megaureter, refluxing form","secondary_identifiers":["MEDGEN:1842549","icd11.foundation:1229028805","GARD:20641","Orphanet:238650","UMLS:C5680935"],"termid":"MONDO:0016551","xrefs":{"Monarch":{"xref_id":"0016551"}}}


id: GO:0002477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class Ib protein complex. The peptide is typically a fragment of a larger exogenous protein which has been degraded within the cell. Class Ib here refers to non-classical class I molecules, such as those of the HLA-E gene family.","definition_xrefs":["PMID:15928678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen via MHC class Ib","termid":"GO:0002428"},{"relation_name":"is_a","term_name":"antigen processing and presentation of exogenous peptide antigen","termid":"GO:0002478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of exogenous peptide antigen via MHC class Ib","synonyms":[{"name":"exogenous peptide antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0002477"}


id: MONDO:0001696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Ehlers-Danlos syndrome (obsolete MONDO:0001696)","termid":"MONDO:0001696","xrefs":{"Monarch":{"xref_id":"0001696"}}}


id: PBO:0051285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-32 (pseudogene)","termid":"PBO:0051285"}


id: PBO:0048154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forty-two-three domain containing 1 pseudogene 1","termid":"PBO:0048154"}


id: MONDO:0003823
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete transient hypogammaglobulinemia of infancy (obsolete MONDO:0003823)","termid":"MONDO:0003823","xrefs":{"Monarch":{"xref_id":"0003823"}}}


id: FYPO:0002829
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phytochelatin measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular phytochelatin level","synonyms":[{"name":"decreased cellular cadystin level","type":"exact"},{"name":"decreased cellular phytochelatin level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phytochelatin level during vegetative growth","type":"exact"},{"name":"decreased phytochelatin accumulation","type":"related"},{"name":"reduced cellular phytochelatin level","type":"exact"}],"termid":"FYPO:0002829"}


id: GO:0062169
data:
  {"annotated_genes":["SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062168"}]},"cv_name":"biological_process","definition":"Any process that mediates the frequency, rate, or extent of plus-end directed microtubule sliding.","definition_xrefs":["PMID:21892183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule-based movement","termid":"GO:0060632"},{"relation_name":"regulates","term_name":"plus-end directed microtubule sliding","termid":"GO:0031535"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of plus-end directed microtubule sliding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0062169","terms_by_termid":{"GO:0062168":null}}


id: _global:regulates_o_results_in_acquisition_of_features_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"This is the combination of the regulates relation with the results_in_acquisition_of_features_of relation.","definition_xrefs":["GOC:mtg_berkeley_2013"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_acquisition_of_features_of","secondary_identifiers":["GOREL:0001010"],"synonyms":[{"name":"regulates differentiation of","type":"exact"},{"name":"regulates_o_results_in_acquisition_of_features_of","type":"exact"}],"termid":"_global:regulates_o_results_in_acquisition_of_features_of"}


id: PBO:0111929
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centaurin ADOP ribosylation factor GTPase activating protein family","termid":"PBO:0111929"}


id: PBO:0113369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates the vacuolar V-ATPase; regulates the assembly state of the V-ATPase holoenzyme, promoting complex disassembly, and counteracting the function of the RAVE complex; interacts with V-ATPase subunits; vacuolar membrane localization requires N-myristoylation and an assembled V-ATPase; GFP-fusion protein localizes to the cytoplasm; null mutation suppresses cdc13-1 temperature sensitivity; member of a conserved family of TLDc domain proteins found in eukaryotes","termid":"PBO:0113369"}


id: PBO:0069747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1028, pseudogene","termid":"PBO:0069747"}


id: PBO:0000135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFS family membrane transporter (predicted)","termid":"PBO:0000135"}


id: GO:0043591
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The structures that lie outside the inner membrane and surround the entire endospore; consists of a peptidoglycan-containing inner layer (the endospore cortex) surrounded by a multilayered proteinaceous coat. An exosporium may be present as an extreme outer layer.","definition_xrefs":["PMID:15035041","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore wall","termid":"GO:0031160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"endospore external encapsulating structure","secondary_identifiers":["GO:0055030"],"synonyms":[{"name":"endospore wall","type":"exact"},{"name":"peptidoglycan-based spore wall","type":"exact"},{"name":"spore wall","type":"broad"}],"termid":"GO:0043591"}


id: PR:O13862
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- deb1 gene.","definition_xrefs":["UniProtKB:O13862","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional activator protein rdp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B1.01","synonyms":[{"name":"Spom972h-deb1","type":"exact"},{"name":"rhp51-DRE-binding protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13862"}


id: MOD:00303
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts seven L-histidinine residues and a four-copper one-sulfur one-hydroxide cluster to heptakis-L-histidino tetracopper mu4-sulfide hydroxide.","definition_xrefs":["PubMed:11024061","RESID:AA0298","PubMed:11041839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper containing modified residue","termid":"MOD:00742"},{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heptakis-L-histidino tetracopper mu4-sulfide hydroxide","synonyms":[{"name":"heptakis-L-histidino tetracopper mu4-sulfide hydroxide","type":"exact"},{"name":"mu4-sulfido bis(bis-N1'-histidino copper)(N1'-histidino-N3'-histidino copper)(N3'-histidino hydroxide copper)","type":"exact"},{"name":"nitrous oxide reductase nosZ CuZ cluster","type":"exact"},{"name":"pentakis-L-N1'-histidino-bis-L-N3'-histidino tetracopper sulfide hydroxide","type":"exact"}],"termid":"MOD:00303"}


id: PBO:0065464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMD7 divergent transcript","termid":"PBO:0065464"}


id: PBO:0058759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6883","termid":"PBO:0058759"}


id: PBO:0110043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFB2M pseudogene 1","termid":"PBO:0110043"}


id: PBO:0035867
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_intracellular_protein_transport_during_vegetative_growth","termid":"PBO:0035867"}


id: GO:0060543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of strand invasion. Strand invasion is the process in which the nucleoprotein complex (composed of the broken single-strand DNA and the recombinase) searches and identifies a region of homology in intact duplex DNA. The broken single-strand DNA displaces the like strand and forms Watson-Crick base pairs with its complement, forming a duplex in which each strand is from one of the two recombining DNA molecules.","definition_xrefs":["GOC:tb","GOC:elh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA recombination","termid":"GO:0045910"},{"relation_name":"is_a","term_name":"regulation of strand invasion","termid":"GO:0060542"},{"relation_name":"negatively_regulates","term_name":"DNA strand invasion","termid":"GO:0042148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of strand invasion","synonyms":[{"name":"negative regulation of D-loop biosynthesis","type":"related"},{"name":"negative regulation of D-loop formation","type":"related"},{"name":"negative regulation of Rad51-mediated strand invasion","type":"exact"}],"termid":"GO:0060543"}


id: PBO:0089944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prospore membrane alpha-1,3-glucan synthase Mok12","termid":"PBO:0089944"}


id: MOD:01566
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ8plex-118 reporter+balance group.","definition_xrefs":["Unimod:731#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ8plex-118 reporter+balance reagent acylated residue","termid":"MOD:01563"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-118 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01566"}


id: MONDO:0035362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inflammatory bowel disease in which the cause of the disease is a mutation in the TRIM22 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene","PMID:26836588"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"TRIM22-related inflammatory bowel disease","secondary_identifiers":["MEDGEN:1842464","GARD:22395","Orphanet:597201","UMLS:C5680271"],"synonyms":[{"name":"TRIM22-related IBD","type":"exact"}],"termid":"MONDO:0035362","xrefs":{"Monarch":{"xref_id":"0035362"}}}


id: PBO:0061596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotensin receptor 2","termid":"PBO:0061596"}


id: GO:1990225
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Narrow, electron-dense part of the rhoptry that extends through the conoid at the apical tip of an apicomplexan parasite. The rhoptry neck serves as a duct through which the contents of the rhoptry are secreted after attachment to the host has been completed and at the commencement of invasion.","definition_xrefs":["GOC:giardia","PMID:23499754","PMID:23937520","PMID:24070999","PMID:24002067","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"rhoptry","termid":"GO:0020008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"rhoptry neck","termid":"GO:1990225"}


id: PBO:0073110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase/reductase family 16C member 6, pseudogene","termid":"PBO:0073110"}


id: GO:1901331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of odontoblast differentiation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of odontoblast differentiation","termid":"GO:1901329"},{"relation_name":"is_a","term_name":"positive regulation of neuroepithelial cell differentiation","termid":"GO:1902913"},{"relation_name":"positively_regulates","term_name":"odontoblast differentiation","termid":"GO:0071895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of odontoblast differentiation","synonyms":[{"name":"activation of odontoblast differentiation","type":"narrow"},{"name":"up regulation of odontoblast differentiation","type":"exact"},{"name":"up-regulation of odontoblast differentiation","type":"exact"},{"name":"upregulation of odontoblast differentiation","type":"exact"}],"termid":"GO:1901331"}


id: PBO:0112858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pombephosphoproteomics_unige_ch_gene","termid":"PBO:0112858"}


id: PBO:0063535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZRN3 antisense RNA 1","termid":"PBO:0063535"}


id: PBO:0073007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel alpha subunit 7","termid":"PBO:0073007"}


id: RO:0002606
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c is a substance that treats d if c is a material entity (such as a small molecule or compound) and d is a pathological process, phenotype or disease, and c is capable of some activity that negative regulates or decreases the magnitude of d.","direct_ancestors":[{"relation_name":"is_a","term_name":"capable_of_inhibiting_or_preventing_pathological_process","termid":"RO:0002599"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_substance_that_treats","termid":"RO:0002606"}


id: GO:0015988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transport of protons across a membrane and against an electrochemical gradient, using energy from a source such as ATP hydrolysis, light, or electron transport.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transport","termid":"GO:1902600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"energy coupled proton transmembrane transport, against electrochemical gradient","termid":"GO:0015988"}


id: PBO:0000718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase Sod1","termid":"PBO:0000718"}


id: MONDO:0012412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any classic complement early component deficiency in which the cause of the disease is a mutation in the C7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic complement early component deficiency","termid":"MONDO:0000015"},{"relation_name":"is_a","term_name":"immunodeficiency due to a late component of complement deficiency","termid":"MONDO:0015700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"complement component 7 deficiency","secondary_identifiers":["GARD:18290","DOID:0060300","MEDGEN:355270","UMLS:C1864694","MESH:C566443","OMIM:610102","NANDO:2200785"],"synonyms":[{"name":"C7 classic complement early component deficiency","type":"exact"},{"name":"C7 deficiency","type":"related"},{"name":"C7D","type":"related"},{"name":"classic complement early component deficiency caused by mutation in C7","type":"exact"},{"name":"complement component 7 deficiency","type":"exact"}],"termid":"MONDO:0012412","xrefs":{"Monarch":{"xref_id":"0012412"}}}


id: FYPO:0003835
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which horsetail movement is normal (i.e. indistinguishable from wild type). Horsetail movement is the oscillatory movement of the nucleus that takes place during meiotic prophase I.","definition_xrefs":["GO:0030989","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"},{"relation_name":"is_a","term_name":"normal nucleus positioning","termid":"FYPO:0001389"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal horsetail movement","synonyms":[{"name":"normal dynein-driven meiotic oscillatory nuclear movement","type":"exact"},{"name":"normal horsetail nuclear movement","type":"exact"}],"termid":"FYPO:0003835"}


id: GO:0030960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of two peptidyl-tyrosines to form a 3'-(O4'-L-tyrosinyl)-L-tyrosine protein cross-link.","definition_xrefs":["RESID:AA0368","PDB:1NGK","PMID:12719529"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 3'-(O4'-L-tyrosinyl)-L-tyrosine (obsolete GO:0030960)","termid":"GO:0030960"}


id: PBO:0085867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; has strong similarity to alanyl-tRNA synthases from Eubacteria; null mutant displays decreased translation rate and increased readthrough of premature stop codons; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YNL040W is not an essential gene","termid":"PBO:0085867"}


id: MONDO:0004498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that arises from the meninges of the sacral region of the spinal cord.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intraspinal meningioma","termid":"MONDO:0001279"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sacral spinal canal and spinal cord meningioma","secondary_identifiers":["NCIT:C5299","DOID:8203","UMLS:C1335893","MEDGEN:277626"],"synonyms":[{"name":"meningioma of sacral spinal canal and spinal cord","type":"exact"},{"name":"meningioma of the sacral spinal canal and spinal cord","type":"exact"},{"name":"sacral intraspinal meningioma","type":"exact"}],"termid":"MONDO:0004498","xrefs":{"Monarch":{"xref_id":"0004498"}}}


id: PBO:0051935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inter-alpha-trypsin inhibitor heavy chain family member 6","termid":"PBO:0051935"}


id: PBO:0085560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein containing GATA family zinc finger motifs; involved in spore wall assembly; sequence similarity to GAT4, and the double mutant gat3 gat4 exhibits reduced dityrosine fluorescence relative to the single mutants","termid":"PBO:0085560"}


id: PBO:0071830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 25","termid":"PBO:0071830"}


id: MONDO:0010094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spondylocarpotarsal synostosis (SCT) syndrome is a skeletal dysplasia clinically characterized by postnatal progressive vertebral fusions frequently manifesting as block vertebrae, contributing to an undersized trunk and a disproportionate short stature, scoliosis, lordosis, carpal and tarsal synostosis, with club feet and a mild facial dysmorphism.","definition_xrefs":["Orphanet:3275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone development disease","termid":"MONDO:0005497"},{"relation_name":"is_a","term_name":"filamin-related bone disorder","termid":"MONDO:0019690"},{"relation_name":"is_a","term_name":"spondylodysplastic dysplasia","termid":"MONDO:0019694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondylocarpotarsal synostosis syndrome","secondary_identifiers":["DOID:0090116","SCTID:702351004","ICD9:758.89","GARD:4974","MEDGEN:341339","MESH:C535780","OMIM:272460","UMLS:C1848934"],"synonyms":[{"name":"SCT","type":"exact"},{"name":"Synspondylism","type":"exact"},{"name":"Synspondylism congenital","type":"related"},{"name":"Synspondylism, congenital","type":"related"},{"name":"congenital scoliosis with unilateral unsegmented bar","type":"exact"},{"name":"congenital synspondylism","type":"exact"},{"name":"scoliosis, congenital with unilateral unsegmented bar","type":"related"},{"name":"scoliosis, congenital, with unilateral unsegmented Bar","type":"related"},{"name":"spondylocarpotarsal syndrome","type":"exact"},{"name":"spondylocarpotarsal synostosis","type":"exact"},{"name":"spondylocarpotarsal synostosis syndrome","type":"exact"},{"name":"vertebral fusion with carpal coalition","type":"exact"}],"termid":"MONDO:0010094","xrefs":{"Monarch":{"xref_id":"0010094"}}}


id: GO:0010077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism retains a population of inflorescence meristem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of meristem identity","termid":"GO:0010074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of inflorescence meristem identity","termid":"GO:0010077"}


id: PBO:0044904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desumoylating isopeptidase 1","termid":"PBO:0044904"}


id: GO:0019113
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of a monooxygenase reaction in which oxygen is incorporated into limonene.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"limonene monooxygenase activity","termid":"GO:0019113"}


id: PBO:0046937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM53B antisense RNA 1","termid":"PBO:0046937"}


id: PBO:0078959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon AGA) 2-2","termid":"PBO:0078959"}


id: GO:0071524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrrolysine, N6-{[(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-yl]carbonyl}-L-lysine.","definition_xrefs":["PMID:17204561","GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid biosynthetic process","termid":"GO:0008652"},{"relation_name":"is_a","term_name":"modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"pyrrolysine metabolic process","termid":"GO:0071525"},{"relation_name":"is_a","term_name":"proteinogenic amino acid biosynthetic process","termid":"GO:0170038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"pyrrolysine biosynthetic process","synonyms":[{"name":"monomethylamine methyltransferase cofactor lysine adduct biosynthetic process","type":"exact"},{"name":"pyrrolysine anabolism","type":"exact"},{"name":"pyrrolysine biosynthesis","type":"exact"},{"name":"pyrrolysine formation","type":"exact"},{"name":"pyrrolysine synthesis","type":"exact"}],"termid":"GO:0071524"}


id: PBO:0089613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated HORMA domain protein Atg101","termid":"PBO:0089613"}


id: PBO:0072682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUN and FYVE domain containing 3","termid":"PBO:0072682"}


id: PBO:0073146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC23 interacting protein","termid":"PBO:0073146"}


id: MONDO:0015807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopic macular degeneration","secondary_identifiers":["GARD:20153","MEDGEN:676480","SCTID:312898002","UMLS:C0730271","Orphanet:178493","EFO:0009201","ICD10CM:H35.3"],"synonyms":[{"name":"myopic maculopathy","type":"exact"}],"termid":"MONDO:0015807","xrefs":{"Monarch":{"xref_id":"0015807"}}}


id: FYPO:0003417
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule plus ends remain in contact with the cell cortex at cell tips for a longer time than normal.","definition_xrefs":["PMID:24530531","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased microtubule dwell time at cell tip","synonyms":[{"name":"increased microtubule dwell time at cell end","type":"exact"},{"name":"increased microtubule dwell time at cell tip during mitotic cell cycle","type":"related"},{"name":"increased microtubule dwell time at cell tip during vegetative growth","type":"exact"},{"name":"increased microtubule plus end dwell time at cell tip","type":"exact"}],"termid":"FYPO:0003417"}


id: PBO:0067523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 666, pseudogene","termid":"PBO:0067523"}


id: GO:0051435
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BH4 protein domain, present in Bcl-2 family members. All anti-apoptotic proteins contain BH1 and BH2 domains; some also contain an additional N-terminal BH4 domain, which is almost never seen in pro-apoptotic proteins. Loss of the BH4 domain can diminish or abrogate anti-apoptotic function or even impart outright death-promoting properties to the protein.","definition_xrefs":["PMID:9704409","Prosite:PS01260","Prosite:PS50063","InterPro:IPR003093","PMID:9020082","PMID:11048732","PMID:12133724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BH domain binding","termid":"GO:0051400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"BH4 domain binding","termid":"GO:0051435"}


id: GO:0009689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation of the chemical reactions and pathways resulting in the formation of phytoalexins, low-molecular mass, lipophilic antimicrobial compounds that accumulate rapidly at sites of incompatible pathogen infection.","definition_xrefs":["ISBN:0943088399"],"gene_count":0,"genotype_count":0,"name":"obsolete induction of phytoalexin biosynthetic process (obsolete GO:0009689)","synonyms":[{"name":"induction of phytoalexin anabolism","type":"exact"},{"name":"induction of phytoalexin biosynthesis","type":"exact"},{"name":"induction of phytoalexin formation","type":"exact"},{"name":"induction of phytoalexin synthesis","type":"exact"}],"termid":"GO:0009689"}


id: RO:0002494
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x transformation of y if x is the immediate transformation of y, or is linked to y through a chain of transformation relationships","direct_ancestors":[{"relation_name":"is_a","term_name":"develops_from","termid":"RO:0002202"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transformation_of","termid":"RO:0002494"}


id: MONDO:0012482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"West-Nile encephalitis","termid":"MONDO:0019376"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"West Nile virus, susceptibility to","secondary_identifiers":["UMLS:C1835867","MEDGEN:372145","OMIM:610379"],"synonyms":[{"name":"WNV, susceptibility to","type":"related"},{"name":"West Nile virus, susceptibility to","type":"exact"}],"termid":"MONDO:0012482","xrefs":{"Monarch":{"xref_id":"0012482"}}}


id: PBO:0003019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein","termid":"PBO:0003019"}


id: PBO:0031068
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_spore_with_abnormal_morphology","termid":"PBO:0031068"}


id: PBO:0028039
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_disassembly","termid":"PBO:0028039"}


id: GO:1902042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of extrinsic apoptotic signaling pathway via death domain receptors.","definition_xrefs":["GOC:TermGenie","PMID:17245429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:1902041"},{"relation_name":"is_a","term_name":"negative regulation of extrinsic apoptotic signaling pathway","termid":"GO:2001237"},{"relation_name":"negatively_regulates","term_name":"extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:0008625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of extrinsic apoptotic signaling pathway via death domain receptors","synonyms":[{"name":"down regulation of death receptor-mediated apoptosis","type":"narrow"},{"name":"down regulation of extrinsic apoptotic signaling pathway via death domain receptors","type":"exact"},{"name":"down-regulation of death receptor-mediated apoptosis","type":"narrow"},{"name":"down-regulation of extrinsic apoptotic signaling pathway via death domain receptors","type":"exact"},{"name":"downregulation of death receptor-mediated apoptosis","type":"narrow"},{"name":"downregulation of extrinsic apoptotic signaling pathway via death domain receptors","type":"exact"},{"name":"inhibition of death receptor-mediated apoptosis","type":"narrow"},{"name":"inhibition of extrinsic apoptotic signaling pathway via death domain receptors","type":"narrow"},{"name":"negative regulation of death receptor-mediated apoptosis","type":"narrow"}],"termid":"GO:1902042"}


id: MONDO:0015897
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare hyperparathyroidism.","gene_count":0,"genotype_count":0,"name":"obsolete rare hyperparathyroidism (obsolete MONDO:0015897)","secondary_identifiers":["Orphanet:181408"],"synonyms":[{"name":"rare hyperparathyroidism","type":"exact"}],"termid":"MONDO:0015897","xrefs":{"Monarch":{"xref_id":"0015897"}}}


id: FYPO:0006078
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which small interfering RNA transcripts derived from ribosomal RNA are present at greater levels than normal.","definition_xrefs":["PomBase:mah","PMID:28541282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased siRNA level","termid":"FYPO:0004207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"increased ribosomal RNA-derived siRNA level","synonyms":[{"name":"increased accumulation of ribosomal RNA-derived siRNA","type":"exact"},{"name":"increased accumulation of siRNAs homologous to ribosomal RNA","type":"related"},{"name":"increased level of ribosomal RNA-derived siRNA","type":"exact"},{"name":"increased level of siRNAs homologous to rRNA","type":"related"},{"name":"increased rRNA-derived siRNA level","type":"exact"},{"name":"increased ribosomal RNA-derived siRNA level during mitotic cell cycle","type":"related"},{"name":"increased ribosomal RNA-derived siRNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0006078"}


id: PBO:0054501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1901","termid":"PBO:0054501"}


id: PBO:0059231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L2 pseudogene 1","termid":"PBO:0059231"}


id: PBO:0050651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 90 alpha family class B member 1","termid":"PBO:0050651"}


id: PBO:0003291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferric-chelate reductase Frp2 (predicted)","termid":"PBO:0003291"}


id: PBO:0079803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member B24, pseudogene","termid":"PBO:0079803"}


id: GO:0060487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an epithelial cell that contributes to the epithelium of the lung.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"is_a","term_name":"lung cell differentiation","termid":"GO:0060479"},{"relation_name":"part_of","term_name":"lung epithelium development","termid":"GO:0060428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung epithelial cell differentiation","synonyms":[{"name":"pulmonary epithelial cell differentiation","type":"related"}],"termid":"GO:0060487"}


id: SO:0001837
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of insertion where the inserted sequence is a mobile element.","definition_xrefs":["EBI:dvga"],"direct_ancestors":[{"relation_name":"contains","term_name":"mobile_genetic_element","termid":"SO:0001037"},{"relation_name":"is_a","term_name":"insertion","termid":"SO:0000667"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mobile_element_insertion","synonyms":[{"name":"mobile element insertion","type":"exact"}],"termid":"SO:0001837"}


id: MONDO:0001649
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of the esophagus caused by fungi, most often candida albicans and candida tropicalis. It usually affects patients with immunodeficiency disorders or diabetes mellitus. Symptoms include dysphagia and pain on swallowing.","definition_xrefs":["NCIT:C27107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophagitis","termid":"MONDO:0001409"},{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"},{"relation_name":"is_a","term_name":"digestive system infectious disorder","termid":"MONDO:0043424"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"fungal esophagitis","secondary_identifiers":["ICD9:117.9","MEDGEN:90960","SCTID:235602008","UMLS:C0341109","DOID:13147"],"synonyms":[{"name":"fungal esophagitis","type":"exact"}],"termid":"MONDO:0001649","xrefs":{"Monarch":{"xref_id":"0001649"}}}


id: GO:0035681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to toll-like receptor 15.","definition_xrefs":["GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface toll-like receptor signaling pathway","termid":"GO:0140895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"toll-like receptor 15 signaling pathway","synonyms":[{"name":"TLR15 signaling pathway","type":"exact"},{"name":"toll-like receptor 15 signalling pathway","type":"exact"}],"termid":"GO:0035681"}


id: PBO:0039071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argonaute RISC catalytic component 3","termid":"PBO:0039071"}


id: MONDO:0016364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Joubert syndrome with ocular defect is, along with pure JS, the most frequent subtype of Joubert syndrome and related disorders (JSRD) characterized by the neurological features of JS associated with retinal dystrophy.","definition_xrefs":["Orphanet:220493"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"Joubert syndrome and related disorders","termid":"MONDO:0015369"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0020022"],"is_obsolete":false,"name":"Joubert syndrome with ocular defect","secondary_identifiers":["MEDGEN:909607","icd11.foundation:1358617785","GARD:10168","SCTID:716998009","ICD10CM:H35.5","UMLS:C4274118"],"synonyms":[{"name":"JBTS3","type":"related"},{"name":"JS-O","type":"exact"},{"name":"Joubert syndrome 3","type":"related"},{"name":"Joubert syndrome with ocular anomalies","type":"related"},{"name":"Joubert syndrome with retinopathy","type":"exact"}],"termid":"MONDO:0016364","xrefs":{"Monarch":{"xref_id":"0016364"}}}


id: PBO:0086392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative component of the protein phosphatase type 2A complex","termid":"PBO:0086392"}


id: FYPO:0006599
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric chromatin is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to centromere during vegetative growth","termid":"FYPO:0000450"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0005306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to centromeric chromatin during vegetative growth","synonyms":[{"name":"decreased protein localisation to centromeric chromatin during vegetative growth","type":"exact"},{"name":"decreased protein localization to centromeric chromatin during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to centromeric chromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0006599"}


id: FYPO:0006706
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a calcium-transporting ATPase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished transporter activity","termid":"FYPO:0002117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0002114","FYPO:0005447","FYPO:0000707","FYPO:0000652","FYPO:0000002"],"is_obsolete":false,"name":"abolished calcium-transporting ATPase activity","synonyms":[{"name":"calcium-transporting ATPase activity abolished","type":"exact"}],"termid":"FYPO:0006706"}


id: GO:0106431
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction N6-methyl-(d)ATP + H2O = N6-methyl-(d)AMP + diphosphate + H+.","definition_xrefs":["PMID:32144205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides","termid":"GO:0016818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"N6-methyl-(d)ATP hydrolase activity","termid":"GO:0106431"}


id: MONDO:0004561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma affecting the retinal portion of the eye. --2003","definition_xrefs":["NCIT:C8601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal cancer","termid":"MONDO:0003072"},{"relation_name":"is_a","term_name":"ocular melanoma","termid":"MONDO:0006325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"retinal melanoma","secondary_identifiers":["UMLS:C0853394","SCTID:423673009","DOID:8427","MEDGEN:163431"],"synonyms":[{"name":"malignant melanoma of retina","type":"exact"},{"name":"malignant melanoma of the retina","type":"exact"},{"name":"malignant retinal melanoma","type":"exact"},{"name":"melanoma (disease) of retina","type":"exact"},{"name":"melanoma of retina","type":"exact"},{"name":"melanoma of the retina","type":"exact"},{"name":"retina melanoma","type":"exact"},{"name":"retina melanoma (disease)","type":"exact"},{"name":"retinal melanoma","type":"exact"}],"termid":"MONDO:0004561","xrefs":{"Monarch":{"xref_id":"0004561"}}}


id: PBO:0039648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 1 subunit gamma 2","termid":"PBO:0039648"}


id: PBO:0044544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"death associated protein","termid":"PBO:0044544"}


id: GO:0043813
data:
  {"annotated_genes":["SJAG_00063","SJAG_02289","SJAG_04545"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87208,107791,110659],"is_not":false,"summary":null,"term":"GO:0043813"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidylinositol-3,5-bisphosphate + H2O = phosphatidylinositol-3-phosphate + orthophosphate.","definition_xrefs":["RHEA:32955","PMID:10806194","PMID:16607019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate 5-phosphatase activity","termid":"GO:0034595"},{"relation_name":"is_a","term_name":"phosphatidylinositol-3,5-bisphosphate phosphatase activity","termid":"GO:0106018"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_02289":null,"SJAG_04545":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1676020","Reactome:R-HSA-1675836","Reactome:R-HSA-1676005","Reactome:R-HSA-1676174"],"synonyms":[{"name":"phosphatidylinositol 3,5-bisphosphate 5-phosphatase activity","type":"exact"}],"termid":"GO:0043813","terms_by_termid":{"GO:0043813":null}}


id: GO:0032914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of transforming growth factor-beta1.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transforming growth factor beta1 production","termid":"GO:0032908"},{"relation_name":"is_a","term_name":"positive regulation of transforming growth factor beta production","termid":"GO:0071636"},{"relation_name":"positively_regulates","term_name":"transforming growth factor beta1 production","termid":"GO:0032905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of transforming growth factor beta1 production","synonyms":[{"name":"activation of transforming growth factor-beta1 production","type":"narrow"},{"name":"positive regulation of TGF-B1 production","type":"exact"},{"name":"positive regulation of TGFB1 production","type":"exact"},{"name":"stimulation of transforming growth factor-beta1 production","type":"narrow"},{"name":"up regulation of transforming growth factor-beta1 production","type":"exact"},{"name":"up-regulation of transforming growth factor-beta1 production","type":"exact"},{"name":"upregulation of transforming growth factor-beta1 production","type":"exact"}],"termid":"GO:0032914"}


id: PBO:0028797
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_replication_fork_arrest_at_rDNA_repeats","termid":"PBO:0028797"}


id: PBO:0061661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 35 pseudogene 1","termid":"PBO:0061661"}


id: PBO:0088464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER UDP-N-acetylglucosamine transmembrane transporter","termid":"PBO:0088464"}


id: FYPO:0000927
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which horsetail movement does not occur. Horsetail movement is the oscillatory movement of the nucleus that takes place during meiotic prophase I.","definition_xrefs":["PomBase:mah","GO:0030989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal horsetail movement","termid":"FYPO:0000197"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abolished horsetail movement","synonyms":[{"name":"absent horsetail movement","type":"exact"},{"name":"dynein-driven meiotic oscillatory nuclear movement abolished","type":"exact"},{"name":"horsetail movement abolished","type":"exact"},{"name":"horsetail nuclear movement abolished","type":"exact"}],"termid":"FYPO:0000927"}


id: GO:1902794
data:
  {"annotated_genes":["SJAG_01867","SJAG_02622","SJAG_00769","SJAG_04768","SJAG_03624","SJAG_03844","SJAG_03664","SJAG_01599","SJAG_02382","SJAG_04574","SJAG_04186"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86975,90277,103693,109979,111601,116034,117619],"is_not":false,"summary":null,"term":"GO:1902794"},{"annotations":[91348,96679,99800,117256,117616],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902801"}]},"cv_name":"biological_process","definition":"The formation of facultative heterochromatin into a heterochromatin domain, enriched in histone H3 methylated on lysine 9 (H3K9me), by a process independent of small interfering RNAs.","definition_xrefs":["PMID:22144463","PMID:24210919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facultative heterochromatin formation","termid":"GO:0140718"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00769":null,"SJAG_01599":null,"SJAG_01867":null,"SJAG_02382":null,"SJAG_02622":null,"SJAG_03624":null,"SJAG_03664":null,"SJAG_03844":null,"SJAG_04186":null,"SJAG_04574":null,"SJAG_04768":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0010467","GO:0006325","GO:0008150"],"is_obsolete":false,"name":"siRNA-independent facultative heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"heterochromatin island assembly","type":"exact"},{"name":"heterochromatin island formation","type":"exact"},{"name":"siRNA-independent facultative heterochromatin assembly","type":"exact"}],"termid":"GO:1902794","terms_by_termid":{"GO:1902794":null,"GO:1902801":null}}


id: GO:0010626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency or extent of the multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system.","definition_xrefs":["GOC:sl","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Schwann cell proliferation","termid":"GO:0010624"},{"relation_name":"is_a","term_name":"negative regulation of glial cell proliferation","termid":"GO:0060253"},{"relation_name":"negatively_regulates","term_name":"Schwann cell proliferation","termid":"GO:0014010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of Schwann cell proliferation","termid":"GO:0010626"}


id: GO:1903382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of an endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway.","definition_xrefs":["PMID:23453807","GOC:TermGenie","GO_REF:0000058","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron apoptotic process","termid":"GO:0043524"},{"relation_name":"is_a","term_name":"negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway","termid":"GO:1902236"},{"relation_name":"is_a","term_name":"regulation of endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway","termid":"GO:1903381"},{"relation_name":"negatively_regulates","term_name":"neuron intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","termid":"GO:0036483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway","synonyms":[{"name":"down regulation of ER stress-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"down regulation of endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"down regulation of neuron intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"},{"name":"down-regulation of ER stress-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"down-regulation of endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"down-regulation of neuron intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"},{"name":"downregulation of ER stress-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"downregulation of endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"downregulation of neuron intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"},{"name":"inhibition of ER stress-induced neuron intrinsic apoptotic signaling pathway","type":"narrow"},{"name":"inhibition of endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway","type":"narrow"},{"name":"inhibition of neuron intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"narrow"},{"name":"negative regulation of ER stress-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"negative regulation of neuron intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"}],"termid":"GO:1903382"}


id: PBO:0048783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GNA13 pseudogene 1","termid":"PBO:0048783"}


id: MOD:00028
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to L-tyrosine.","definition_xrefs":["RESID:AA0019","PubMed:6061414","PubMed:6120171","ChEBI:29975","PubMed:2190093","PubMed:5550972","DeltaMass:0","PubMed:6692818","PubMed:2542938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-tyrosine residue","synonyms":[{"name":"(2S)-2-amino-3-(4-hydoxyphenyl)propanoic acid","type":"exact"},{"name":"2-azanyl-3-(4-hydoxyphenyl)propanoic acid","type":"exact"},{"name":"L-tyrosine","type":"exact"},{"name":"Tyr","type":"exact"},{"name":"alpha-amino-beta-(para-hydroxyphenyl)propionic acid","type":"exact"},{"name":"p-tyrosine","type":"exact"},{"name":"para-hydroxyphenylalanine","type":"exact"}],"termid":"MOD:00028"}


id: PBO:0059922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 8","termid":"PBO:0059922"}


id: PBO:0043767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase copper chaperone COX17","termid":"PBO:0043767"}


id: PBO:0013068
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae CDC28","termid":"PBO:0013068"}


id: PBO:0050627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor 2","termid":"PBO:0050627"}


id: MONDO:0030014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy, limb-girdle, autosomal recessive 26","secondary_identifiers":["UMLS:C5394268","MEDGEN:1718449","OMIM:618848"],"synonyms":[{"name":"LGMDR26","type":"exact"},{"name":"MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 26","type":"exact"},{"name":"muscular dystrophy, limb-girdle, autosomal recessive 26","type":"exact"}],"termid":"MONDO:0030014","xrefs":{"Monarch":{"xref_id":"0030014"}}}


id: GO:0019710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The methylation of peptidyl-asparagine to form peptidyl-N4-methyl-L-asparagine or peptidyl-N4,N4-dimethyl-L-asparagine.","definition_xrefs":["RESID:AA0070","RESID:AA0311"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-asparagine methylation (obsolete GO:0019710)","termid":"GO:0019710"}


id: MONDO:0023288
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"green sandford davison syndrome","secondary_identifiers":["OMIM:601446","UMLS:C2931777","MESH:C538221","MEDGEN:419160"],"synonyms":[{"name":"anal anomalies, renal tract abnormalities, genital malformations, and syndactyly","type":"related"},{"name":"renal and anogenital malformations with syndactyly","type":"related"}],"termid":"MONDO:0023288","xrefs":{"Monarch":{"xref_id":"0023288"}}}


id: PBO:0054670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2076","termid":"PBO:0054670"}


id: MONDO:1011086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis, non-human animal","termid":"MONDO:1010267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, sheep","secondary_identifiers":["OMIA:001033-9940"],"termid":"MONDO:1011086","xrefs":{"Monarch":{"xref_id":"1011086"}}}


id: MONDO:0957432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"compartment syndrome","termid":"MONDO:0004001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal compartment syndrome","secondary_identifiers":["Orphanet:641829","UMLS:C5782100","MEDGEN:1843409"],"termid":"MONDO:0957432","xrefs":{"Monarch":{"xref_id":"0957432"}}}


id: MONDO:0958110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin vascular disease","termid":"MONDO:0019293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"atrophic papulosis","secondary_identifiers":["Orphanet:656071"],"termid":"MONDO:0958110","xrefs":{"Monarch":{"xref_id":"0958110"}}}


id: PBO:0065429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1 pseudogene 2","termid":"PBO:0065429"}


id: FYPO:0004667
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids is normal (i.e. indistinguishable from wild type) at the centromeric regions during meiosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic sister chromatid cohesion","termid":"FYPO:0002094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic sister chromatid cohesion at centromere","synonyms":[{"name":"normal meiotic sister chromatid cohesion, centromeric","type":"exact"},{"name":"normal sister chromatid cohesion at centromere during meiosis","type":"exact"}],"termid":"FYPO:0004667"}


id: MONDO:0011065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hunter-McAlpine craniosynostosis is characterized by craniosynostosis, intellectual deficit, short stature, facial dysmorphism (oval face with almond-shaped palpebral fissures, droopy eyelids and a small nose) and minor distal anomalies. It has been described in 10 patients. Transmission is autosomal dominant and the syndrome is associated with partial duplication of the long arm of chromosome 5 (5q35-5qter).","definition_xrefs":["Orphanet:97340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Hunter-McAlpine craniosynostosis","secondary_identifiers":["SCTID:721227001","GARD:2754","MEDGEN:321949","icd11.foundation:1445975694","MESH:C536072","UMLS:C1832408","OMIM:601379"],"synonyms":[{"name":"Hunter-McAlpine craniosynostosis syndrome","type":"related"},{"name":"Hunter-McAlpine syndrome","type":"related"},{"name":"craniosynostosis, mental deficiency, almond-shaped palpebral fissures, downturned mouth, mild acral-skeletal anomalies, and short stature","type":"related"}],"termid":"MONDO:0011065","xrefs":{"Monarch":{"xref_id":"0011065"}}}


id: PBO:0040889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein 15","termid":"PBO:0040889"}


id: PBO:0045232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C19","termid":"PBO:0045232"}


id: PBO:0041708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin 2 pseudogene 3","termid":"PBO:0041708"}


id: PBO:0056057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukemia-associated non-coding IGF1R activator RNA 1","termid":"PBO:0056057"}


id: GO:0120103
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which assembles on the mother centriole during cilium formation, adjacent and proximal to a centriolar distal appendage. In human, it contains ODF2, CNTRL, NIN, CCDC120c and CCDC68.","definition_xrefs":["PMID:27818179","PMID:23213374","GOC:cilia","PMID:28422092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"centriolar subdistal appendage","synonyms":[{"name":"subdistal appendage of basal body","type":"exact"},{"name":"subdistal appendage of centriole","type":"exact"},{"name":"subdistal appendage of mother centriole","type":"exact"}],"termid":"GO:0120103"}


id: PBO:0028450
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_cycle_arrest_in_mitotic_G1_phase_in_response_to_nitrogen_starvation","termid":"PBO:0028450"}


id: PBO:0006183
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_regulation_target","termid":"PBO:0006183"}


id: PBO:0054369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1763","termid":"PBO:0054369"}


id: GO:0050452
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CoA + glutathione + NADP+ = CoA-glutathione + NADPH + H+.","definition_xrefs":["RHEA:14617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"CoA-glutathione reductase (NADPH) activity","secondary_identifiers":["EC:1.8.1.10","MetaCyc:COA-GLUTATHIONE-REDUCTASE-NADPH-RXN"],"synonyms":[{"name":"CoA-glutathione reductase (NADP) activity","type":"exact"},{"name":"CoA-glutathione reductase activity","type":"broad"},{"name":"NADPH-dependent coenzyme A-SS-glutathione reductase activity","type":"exact"},{"name":"NADPH:CoA-glutathione oxidoreductase activity","type":"exact"},{"name":"coenzyme A disulfide-glutathione reductase activity","type":"broad"},{"name":"coenzyme A glutathione disulfide reductase activity","type":"broad"},{"name":"glutathione:NADP+ oxidoreductase (CoA-acylating)","type":"exact"}],"termid":"GO:0050452"}


id: MONDO:0005923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with species in the genus pneumocystis, a fungus causing interstitial plasma cell pneumonia (pneumonia, pneumocystis) and other infections in humans and other mammals. Immunocompromised patients, especially those with aids, are particularly susceptible to these infections. Extrapulmonary sites are rare but seen occasionally.","definition_xrefs":["MESH:D016720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pneumocystis infectious disease","secondary_identifiers":["EFO:0007447","MEDGEN:163415","UMLS:C0851886"],"synonyms":[{"name":"Pneumocystis infection","type":"exact"},{"name":"infections, Pneumocystis","type":"related"}],"termid":"MONDO:0005923","xrefs":{"Monarch":{"xref_id":"0005923"}}}


id: PBO:0059025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 14","termid":"PBO:0059025"}


id: GO:0052430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of RNA in a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont RNA levels (obsolete GO:0052430)","termid":"GO:0052430"}


id: PBO:0050626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor 1","termid":"PBO:0050626"}


id: PBO:0067992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 294","termid":"PBO:0067992"}


id: PBO:0051995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctional adhesion molecule 3","termid":"PBO:0051995"}


id: GO:0019373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which arachidonic acid is converted to other compounds including epoxyeicosatrienoic acids and dihydroxyeicosatrienoic acids.","definition_xrefs":["GOC:mah","PMID:17979511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arachidonate metabolic process","termid":"GO:0019369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"epoxygenase P450 pathway","secondary_identifiers":["Reactome:R-HSA-2142670"],"termid":"GO:0019373"}


id: GO:0140274
data:
  {"annotated_genes":["SJAG_01224","SJAG_01837","SJAG_01805","SJAG_00082","SJAG_03048","SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98128],"is_not":false,"summary":null,"term":"GO:0140274"},{"annotations":[93288,101884,89476,110693,116174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[116177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904967"},{"annotations":[116178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140273"}]},"cv_name":"biological_process","definition":"The cell cycle process where kinetochore microtubule attachment defects are corrected.","definition_xrefs":["PMID:15525536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01224":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"repair of kinetochore microtubule attachment defect","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"correction of kinetochore microtubule attachment defects","type":"exact"},{"name":"repair of kinetochore microtubule attachment defects","type":"exact"}],"termid":"GO:0140274","terms_by_termid":{"GO:0140273":null,"GO:0140274":null,"GO:0140429":null,"GO:1904967":null}}


id: GO:0046130
data:
  {"annotated_genes":["SJAG_02580","SJAG_02959"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87061,87062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any purine ribonucleoside, a nucleoside in which purine base is linked to a ribose (beta-D-ribofuranose) molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside catabolic process","termid":"GO:0006152"},{"relation_name":"is_a","term_name":"ribonucleoside catabolic process","termid":"GO:0042454"},{"relation_name":"is_a","term_name":"purine ribonucleoside metabolic process","termid":"GO:0046128"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02580":null,"SJAG_02959":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"purine ribonucleoside catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine ribonucleoside breakdown","type":"exact"},{"name":"purine ribonucleoside catabolism","type":"exact"},{"name":"purine ribonucleoside degradation","type":"exact"}],"termid":"GO:0046130","terms_by_termid":{"GO:0006154":null}}


id: PBO:0004218
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tricothiodystrophy disorder","termid":"PBO:0004218"}


id: PBO:0051186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-79 (pseudogene)","termid":"PBO:0051186"}


id: GO:0032904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of nerve growth factor (NGF).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neurotrophin production","termid":"GO:0032900"},{"relation_name":"is_a","term_name":"regulation of nerve growth factor production","termid":"GO:0032903"},{"relation_name":"negatively_regulates","term_name":"nerve growth factor production","termid":"GO:0032902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nerve growth factor production","synonyms":[{"name":"down regulation of nerve growth factor production","type":"exact"},{"name":"down-regulation of nerve growth factor production","type":"exact"},{"name":"downregulation of nerve growth factor production","type":"exact"},{"name":"inhibition of nerve growth factor production","type":"narrow"},{"name":"negative regulation of NGF production","type":"exact"}],"termid":"GO:0032904"}


id: GO:0006639
data:
  {"annotated_genes":["SJAG_04041","SJAG_03609","SJAG_02763","SJAG_03604","SJAG_02907","SJAG_02683","SJAG_01036","SJAG_03162","SJAG_02487","SJAG_02089","SJAG_02543"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111552,113679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046339"},{"annotations":[89510,111555,113682,90946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019432"},{"annotations":[91378,97968,117083,93517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019433"},{"annotations":[93155,91379,89592,114288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006642"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving acylglycerol, any mono-, di- or triester of glycerol with (one or more) fatty acids.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral lipid metabolic process","termid":"GO:0006638"},{"relation_name":"is_a","term_name":"glycerolipid metabolic process","termid":"GO:0046486"}],"gene_count":11,"genes_by_uniquename":{"SJAG_01036":null,"SJAG_02089":null,"SJAG_02487":null,"SJAG_02543":null,"SJAG_02683":null,"SJAG_02763":null,"SJAG_02907":null,"SJAG_03162":null,"SJAG_03604":null,"SJAG_03609":null,"SJAG_04041":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"acylglycerol metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"acylglycerol metabolism","type":"exact"},{"name":"glyceride metabolic process","type":"exact"},{"name":"glyceride metabolism","type":"exact"}],"termid":"GO:0006639","terms_by_termid":{"GO:0006642":null,"GO:0019432":null,"GO:0019433":null,"GO:0046339":null}}


id: PBO:0029896
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_DNA_damage_checkpoint","termid":"PBO:0029896"}


id: GO:0106426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the kainate selective glutamate receptor signaling pathway.","definition_xrefs":["PMID:12597860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glutamate receptor signaling pathway","termid":"GO:1900449"},{"relation_name":"regulates","term_name":"kainate selective glutamate receptor signaling pathway","termid":"GO:0098991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of kainate selective glutamate receptor signaling pathway","termid":"GO:0106426"}


id: GO:0030308
data:
  {"annotated_genes":["SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, extent or direction of cell growth.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell growth","termid":"GO:0001558"},{"relation_name":"is_a","term_name":"negative regulation of growth","termid":"GO:0045926"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"negatively_regulates","term_name":"cell growth","termid":"GO:0016049"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02169":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cell growth","type":"exact"},{"name":"down-regulation of cell growth","type":"exact"},{"name":"downregulation of cell growth","type":"exact"},{"name":"inhibition of cell growth","type":"narrow"}],"termid":"GO:0030308","terms_by_termid":{"GO:0051517":null}}


id: GO:0046843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the dorsal filaments, elaborate specializations of the chorion that protrude from the anterior end of the egg and facilitate embryonic respiration.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"egg chorion assembly","termid":"GO:0007306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"dorsal appendage formation","termid":"GO:0046843"}


id: PBO:0041565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 20 open reading frame 85","termid":"PBO:0041565"}


id: MONDO:0008875
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blepharophimosis-ptosis-esotropia-syndactyly-short stature syndrome is characterized by the association of blepharophimosis and ptosis, V-esotropia, and weakness of extraocular and frontal muscles with syndactyly of the toes, short stature, prognathism, and hypertrophy and fusion of the eyebrows. It has been described in six members of three related families. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:2057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blepharophimosis-ptosis-esotropia-syndactyly-short stature syndrome","secondary_identifiers":["MESH:C536235","OMIM:210745","GARD:905","UMLS:C1859432","SCTID:717914000","MEDGEN:347880"],"synonyms":[{"name":"Frydman Cohen Karmon syndrome","type":"related"},{"name":"Frydman-Cohen-Karmon syndrome","type":"exact"},{"name":"blepharophimosis - ptosis - esotropia - syndactyly - short stature","type":"related"},{"name":"blepharophimosis with ptosis, syndactyly, and short stature","type":"related"}],"termid":"MONDO:0008875","xrefs":{"Monarch":{"xref_id":"0008875"}}}


id: FYPO:0006421
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Fbh1 (also called Rad22) accumulates is lower than normal.","definition_xrefs":["PomBase:mah","PMID:27304859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased number of Fbh1 foci during vegetative growth","synonyms":[{"name":"decreased number of Fbh1 foci during mitotic cell cycle","type":"related"},{"name":"reduced number of Fbh1 foci during vegetative growth","type":"exact"}],"termid":"FYPO:0006421"}


id: GO:0018161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dipyrrins (pyrromethanes), compounds containing two pyrrole rings linked through a methine, -CH=, group.","definition_xrefs":["PMID:17430001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"dipyrrin metabolic process","termid":"GO:0046453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dipyrrin biosynthetic process","synonyms":[{"name":"dipyrrin anabolism","type":"exact"},{"name":"dipyrrin biosynthesis","type":"exact"},{"name":"dipyrrin formation","type":"exact"},{"name":"dipyrrin synthesis","type":"exact"},{"name":"dipyrromethane biosynthesis","type":"exact"},{"name":"dipyrromethane biosynthetic process","type":"exact"}],"termid":"GO:0018161"}


id: GO:1901526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitophagy.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macroautophagy","termid":"GO:0016239"},{"relation_name":"is_a","term_name":"regulation of mitophagy","termid":"GO:1901524"},{"relation_name":"is_a","term_name":"positive regulation of autophagy of mitochondrion","termid":"GO:1903599"},{"relation_name":"positively_regulates","term_name":"mitophagy","termid":"GO:0000423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitophagy","synonyms":[{"name":"activation of macromitophagy","type":"narrow"},{"name":"positive regulation of macromitophagy","type":"exact"},{"name":"up regulation of macromitophagy","type":"exact"},{"name":"up-regulation of macromitophagy","type":"exact"},{"name":"upregulation of macromitophagy","type":"exact"}],"termid":"GO:1901526"}


id: GO:0031663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a lipopolysaccharide (LPS) to a receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. Lipopolysaccharides are major components of the outer membrane of Gram-negative bacteria, making them prime targets for recognition by the immune system.","definition_xrefs":["PMID:15379975","GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"part_of","term_name":"cellular response to lipopolysaccharide","termid":"GO:0071222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"lipopolysaccharide-mediated signaling pathway","synonyms":[{"name":"LPS-mediated signaling pathway","type":"exact"},{"name":"lipopolysaccharide-mediated signalling pathway","type":"exact"}],"termid":"GO:0031663"}


id: GO:0050572
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-idonate + NAD(P)+ = 5-dehydrogluconate + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-idonate 5-dehydrogenase [NAD(P)+] activity","secondary_identifiers":["MetaCyc:1.1.1.264-RXN"],"synonyms":[{"name":"L-idonate:NAD(P)+ oxidoreductase activity","type":"related"}],"termid":"GO:0050572"}


id: MONDO:0100232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing psoriatic arthritis.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psoriatic arthritis, susceptibility to","secondary_identifiers":["UMLS:C1835223","MEDGEN:322604","OMIM:607507"],"synonyms":[{"name":"psoriatic arthritis, susceptibility","type":"exact"},{"name":"psoriatic arthritis, susceptibility to","type":"exact"}],"termid":"MONDO:0100232","xrefs":{"Monarch":{"xref_id":"0100232"}}}


id: PBO:0086730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; not conserved in closely related Saccharomyces species; 98% of ORF overlaps the verified gene YPT6; deletion causes a vacuolar protein sorting defect; decreased levels of protein in enolase deficient mutant","termid":"PBO:0086730"}


id: PBO:0083811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential RNA-binding component of cleavage and polyadenylation factor; contains five zinc fingers; required for pre-mRNA 3'-end processing and polyadenylation; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0083811"}


id: PBO:0074342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 1","termid":"PBO:0074342"}


id: PBO:0000577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein (predicted)","termid":"PBO:0000577"}


id: GO:0016725
data:
  {"annotated_genes":["SJAG_02948","SJAG_04665","SJAG_00885"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106754,91924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051063"},{"annotations":[71369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004748"},{"annotations":[71371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008998"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH2 group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02948":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on CH or CH2 groups","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:1.17.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on CH or CH2 groups, other acceptors","type":"narrow"}],"termid":"GO:0016725","terms_by_termid":{"GO:0004748":null,"GO:0008998":null,"GO:0051063":null}}


id: PBO:0061330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B8","termid":"PBO:0061330"}


id: MOD:01752
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Proteome Sciences TMT6plex-130 reporter+balance group.","definition_xrefs":["Unimod:737"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"cysTMT6plex-130 reporter+balance reagent cysteine disulfide","termid":"MOD:01827"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent acylated residue","termid":"MOD:01715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-130 reporter+balance reagent acylated residue","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01752"}


id: MOD:02062
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an N-formyl-L-methionine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified N-formyl-L-methionine residue","termid":"MOD:01450"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked N-formyl-L-methionine residue","termid":"MOD:02062"}


id: PBO:0076310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptojanin 2","termid":"PBO:0076310"}


id: GO:0005461
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a UDP-glucuronic acid from one side of a membrane to the other. UDP-glucuronic acid is a substance composed of glucuronic acid in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transporter activity","termid":"GO:0015165"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"UDP-glucuronate transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-9912889","Reactome:R-HSA-174368","Reactome:R-HSA-5603297"],"synonyms":[{"name":"UDP-glucuronic acid transmembrane transporter activity","type":"exact"}],"termid":"GO:0005461"}


id: GO:1904228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of glycogen synthase activity, transferring glucose-1-phosphate.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","GOC:rl","PMID:17569761","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of glycogen synthase activity, transferring glucose-1-phosphate (obsolete GO:1904228)","synonyms":[{"name":"activation of glycogen synthase activity, transferring glucose-1-phosphate","type":"narrow"},{"name":"up regulation of glycogen synthase activity, transferring glucose-1-phosphate","type":"exact"},{"name":"up-regulation of glycogen synthase activity, transferring glucose-1-phosphate","type":"exact"},{"name":"upregulation of glycogen synthase activity, transferring glucose-1-phosphate","type":"exact"}],"termid":"GO:1904228"}


id: PBO:0045494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermatan sulfate epimerase like","termid":"PBO:0045494"}


id: PBO:0026794
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_nuclear_periphery","termid":"PBO:0026794"}


id: GO:0045267
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The hexamer that possesses the catalytic activity of the mitochondrial hydrogen-transporting ATP synthase.","definition_xrefs":["PMID:10838056"],"gene_count":0,"genotype_count":0,"name":"obsolete proton-transporting ATP synthase, catalytic core (obsolete GO:0045267)","synonyms":[{"name":"hydrogen-transporting ATP synthase, catalytic core","type":"exact"}],"termid":"GO:0045267"}


id: PBO:0043826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPS1 intronic transcript 1","termid":"PBO:0043826"}


id: GO:0030900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions).","definition_xrefs":["PMID:4975589","PMID:4992177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"brain development","termid":"GO:0007420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain development","synonyms":[{"name":"prosencephalon development","type":"exact"}],"termid":"GO:0030900"}


id: MONDO:0043346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Progressive transformation of germinal centers is a condition in which a lymph node becomes very enlarged (lymphadenopathy). Typically, only one lymph node is affected, though PTGC can involve multiple lymph nodes. Theneck is the most common location of affected lymph nodes, but PTGC may also affect lymph nodes in the groin and armpits. adults are more frequently affected than children, but children have a higher chance of developing PTGC multiple times (recurrence). PTGC is not considered a precancerous condition, though it has been associated with Hodgkin lymphoma.","definition_xrefs":["GARD:0010712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"progressive transformation of germinal centers","secondary_identifiers":["NCIT:C38408","MESH:C548085","UMLS:C1514481","GARD:10712","MEDGEN:271018"],"synonyms":[{"name":"PTGC","type":"related"},{"name":"progressive transformation of Germinal centers","type":"exact"},{"name":"progressive transformation of Germinal centres","type":"exact"}],"termid":"MONDO:0043346","xrefs":{"Monarch":{"xref_id":"0043346"}}}


id: GO:0051003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the ligation of two substances via a nitrogen-metal bond, forming a coordination complex.","definition_xrefs":["EC:6.6.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming nitrogen-metal bonds","termid":"GO:0051002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"ligase activity, forming nitrogen-metal bonds, forming coordination complexes","termid":"GO:0051003"}


id: MONDO:0005960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Silicosis is a respiratory disease caused by breathing in (inhaling) silica dust. There are three types of silicosis: Simple chronic silicosis, the most common type of silicosis, results from long-term exposure (usually more than 20years) to low amounts of silica dust. Simple chronic silicosismay causepeople to have difficulty breathing. Accelerated silicosis occurs after 5 to 15 yearsof exposure of higher levels of silica.Swelling of the lungsand other symptoms occur faster in this type of silicosis than in the simple chronic form. Acute silicosis results from short-term exposure (weeks or months) of large amounts of silica.The lungs become very inflamed and can fill with fluid, causing severe shortness of breath and low blood oxygen levels. A cough, weight loss, and fatigue may also be present. Acute silicosis progresses rapidly and can be fatal within months. People who work in jobs where they are exposed to silica dust (mining, quarrying, construction, sand blasting, stone cutting) are at risk of developing this condition.","direct_ancestors":[{"relation_name":"is_a","term_name":"pneumoconiosis","termid":"MONDO:0015926"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silicosis","secondary_identifiers":["NCIT:C3369","DOID:10325","MESH:D012829","MEDGEN:20758","SCTID:805002","UMLS:C0037116","ICD9:502","EFO:0007485","GARD:7647"],"synonyms":[{"name":"accelerated silicosis","type":"related"},{"name":"acute silicosis","type":"related"},{"name":"chronic silicosis","type":"related"},{"name":"experimental silicosis","type":"related"},{"name":"nodular silicosis","type":"related"},{"name":"pneumoconiosis caused by silica","type":"related"},{"name":"pneumoconiosis due to silica","type":"exact"},{"name":"pneumoconiosis due to silicates","type":"exact"},{"name":"silica pneumoconiosis","type":"exact"},{"name":"silicatosis","type":"related"},{"name":"silicosis","type":"exact"},{"name":"silicotic fibrosis of lung","type":"exact"},{"name":"silicotuberculosis","type":"narrow"}],"termid":"MONDO:0005960","xrefs":{"Monarch":{"xref_id":"0005960"}}}


id: PBO:0047661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 14","termid":"PBO:0047661"}


id: PBO:0061325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B3","termid":"PBO:0061325"}


id: GO:0021569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of rhombomere 3 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:dgh","GOC:curators","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 3 development","termid":"GO:0021569"}


id: PBO:0069307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 563, pseudogene","termid":"PBO:0069307"}


id: PBO:0079440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tu translation elongation factor, mitochondrial pseudogene 1","termid":"PBO:0079440"}


id: MONDO:1012414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary hypoplasia with anasarca, non-human animal","termid":"MONDO:1011717"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary hypoplasia with anasarca, cattle","secondary_identifiers":["OMIA:001562-9913"],"termid":"MONDO:1012414","xrefs":{"Monarch":{"xref_id":"1012414"}}}


id: GO:0010692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of alkaline phosphatase activity, the catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an alkaline pH optimum.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatase activity","termid":"GO:0010921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of alkaline phosphatase activity","termid":"GO:0010692"}


id: PBO:0005608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase Gst1","termid":"PBO:0005608"}


id: PBO:0034087
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ectoparasite_of","termid":"PBO:0034087"}


id: PBO:0050588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock factor binding protein 1","termid":"PBO:0050588"}


id: PBO:0066851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 151","termid":"PBO:0066851"}


id: MONDO:0021470
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the pancreas.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign digestive system neoplasm","termid":"MONDO:0000385"},{"relation_name":"is_a","term_name":"pancreatic neoplasm","termid":"MONDO:0021040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"benign neoplasm of pancreas","secondary_identifiers":["ICD10CM:D13.6","MEDGEN:91126","SCTID:92264007","UMLS:C0347284","NCIT:C4612","icd11.foundation:1870352651"],"synonyms":[{"name":"benign neoplasm of the pancreas","type":"exact"},{"name":"benign pancreas neoplasm","type":"exact"},{"name":"benign pancreas tumor","type":"exact"},{"name":"benign pancreas tumour","type":"exact"},{"name":"benign pancreatic neoplasm","type":"exact"},{"name":"benign pancreatic tumor","type":"exact"},{"name":"benign pancreatic tumour","type":"exact"},{"name":"benign tumor of pancreas","type":"exact"},{"name":"benign tumor of the pancreas","type":"exact"},{"name":"benign tumour of pancreas","type":"exact"},{"name":"benign tumour of the pancreas","type":"exact"},{"name":"pancreas benign neoplasm","type":"exact"},{"name":"pancreas neoplasm, benign","type":"exact"},{"name":"pancreas tumor, benign","type":"exact"},{"name":"pancreatic neoplasm, benign","type":"exact"},{"name":"pancreatic tumor, benign","type":"exact"}],"termid":"MONDO:0021470","xrefs":{"Monarch":{"xref_id":"0021470"}}}


id: GO:0102717
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: DIBOA-beta-D-glucoside + O2 + 2-oxoglutarate = TRIBOA-beta-D-glucoside + succinate + carbon dioxide.","definition_xrefs":["EC:1.14.11.59","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, with 2-oxoglutarate as one donor, and the other dehydrogenated","termid":"GO:0050498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"DIBOA-glucoside oxygenase activity","secondary_identifiers":["MetaCyc:RXN-6685","RHEA:32115"],"termid":"GO:0102717"}


id: MOD:00154
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to O4'-(8alpha-FAD)-L-tyrosine.","definition_xrefs":["Unimod:50#Y","DeltaMass:0","PubMed:7391034","RESID:AA0145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAD modified residue","termid":"MOD:00895"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O4'-(8alpha-FAD)-L-tyrosine","synonyms":[{"name":"(2S)-2-amino-3-(4-[8alpha-riboflavin 5'-(trihydrogen diphosphate) 5'->5'-ester with adenosine]oxyphenyl)propanoic acid","type":"exact"},{"name":"8alpha-(O4'-tyrosyl)FAD","type":"exact"},{"name":"FAD","type":"related"},{"name":"Flavin adenine dinucleotide","type":"related"},{"name":"MOD_RES O-8alpha-FAD tyrosine","type":"exact"},{"name":"O-8 alpha-Flavin [FAD])- (of Tyrosine)","type":"exact"},{"name":"O4'-(8alpha-FAD)-L-tyrosine","type":"exact"},{"name":"O8aFADTyr","type":"exact"}],"termid":"MOD:00154"}


id: MONDO:0013475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in which the cause of the disease is a mutation in the PLN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy 18","secondary_identifiers":["UMLS:C3151265","MEDGEN:462615","DOID:0110324","OMIM:613874"],"synonyms":[{"name":"CMH18","type":"exact"},{"name":"PLN hypertrophic cardiomyopathy","type":"exact"},{"name":"cardiomyopathy familial hypertrophic 18","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 18","type":"related"},{"name":"cardiomyopathy, familial hypertrophic, type 18","type":"exact"},{"name":"cardiomyopathy, hypertrophic, 18","type":"exact"},{"name":"hypertrophic cardiomyopathy caused by mutation in PLN","type":"exact"},{"name":"hypertrophic cardiomyopathy type 18","type":"exact"}],"termid":"MONDO:0013475","xrefs":{"Monarch":{"xref_id":"0013475"}}}


id: FYPO:0001178
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable when cells in a culture in stationary phase are deprived of nitrogen.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"loss of viability upon nutrient depletion","termid":"FYPO:0000244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"loss of viability upon nitrogen starvation","synonyms":[{"name":"decreased viability upon nitrogen starvation","type":"exact"},{"name":"loss of cell population viability upon nitrogen starvation","type":"exact"},{"name":"loss of viability in stationary phase upon nitrogen depletion","type":"related"},{"name":"loss of viability upon nitrogen depletion","type":"exact"},{"name":"loss of viability upon nitrogen deprivation","type":"exact"},{"name":"reduced viability upon nitrogen starvation","type":"exact"}],"termid":"FYPO:0001178"}


id: MONDO:0020208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A myopia (disease) that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"gene_count":0,"genotype_count":0,"name":"obsolete syndromic myopia (obsolete MONDO:0020208)","secondary_identifiers":["Orphanet:98620"],"synonyms":[{"name":"syndrome associated with myopia (disease)","type":"exact"},{"name":"syndromic myopia (disease)","type":"exact"}],"termid":"MONDO:0020208","xrefs":{"Monarch":{"xref_id":"0020208"}}}


id: PBO:0028511
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_heterochromatin_island","termid":"PBO:0028511"}


id: GO:0009665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The partitioning of plastids between daughter cells at cell division.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid organization","termid":"GO:0009657"},{"relation_name":"is_a","term_name":"organelle inheritance","termid":"GO:0048308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plastid inheritance","termid":"GO:0009665"}


id: GO:0036308
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + guanosine(1516) in 16S rRNA = N(2)-methylguanosine(1516) in 16S rRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:22079366","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (guanine-N2-)-methyltransferase activity","termid":"GO:0008990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0140098","GO:0016741","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"16S rRNA (guanine(1516)-N(2))-methyltransferase activity","termid":"GO:0036308"}


id: PBO:0114068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3129","termid":"PBO:0114068"}


id: PBO:0089499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Nop9","termid":"PBO:0089499"}


id: PBO:0108581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat protein, human ATXN10 ortholog","termid":"PBO:0108581"}


id: MONDO:0004597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Localized necrosis of lung tissue caused by obstruction of the arterial blood supply, most often due to pulmonary embolism.","definition_xrefs":["NCIT:C50714"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete acute pulmonary heart disease (obsolete MONDO:0004595)","termid":"MONDO:0004595"},{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary embolism and infarction","secondary_identifiers":["ICD9:415.1","ICD9:415.19","SCTID:64662007","MEDGEN:19577","UMLS:C0034074","MESH:D054060","DOID:8516"],"synonyms":[{"name":"infarction, pulmonary","type":"exact"},{"name":"lung infarction","type":"related"},{"name":"pulmonary infarction","type":"related"}],"termid":"MONDO:0004597","xrefs":{"Monarch":{"xref_id":"0004597"}}}


id: RO:HOM0000020
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Orthology that involves two genes that did not experience any duplication after the speciation event that created them.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_orthology_relationship_with","termid":"RO:HOM0000017"},{"relation_name":"is_a","term_name":"in_1_to_1_homology_relationship_with","termid":"RO:HOM0000019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_1_to_1_orthology_relationship_with","synonyms":[{"name":"1 to 1 orthologous to","type":"exact"},{"name":"1:1 orthology","type":"exact"},{"name":"one-to-one orthology","type":"exact"}],"termid":"RO:HOM0000020"}


id: FYPO:0009078
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing ethanol as the carbon source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0002057","FYPO:0001985","FYPO:0002058","FYPO:0002060","FYPO:0000139"],"is_obsolete":false,"name":"decreased cell population growth on ethanol carbon source","synonyms":[{"name":"decreased growth on ethanol carbon source","type":"broad"},{"name":"decreased vegetative cell growth on ethanol carbon source","type":"exact"},{"name":"reduced cell growth on ethanol carbon source","type":"related"},{"name":"slow cell growth on ethanol carbon source","type":"narrow"}],"termid":"FYPO:0009078"}


id: GO:0000439
data:
  {"annotated_genes":["SJAG_00512","SJAG_00901","SJAG_03206","SJAG_00995","SJAG_04368","SJAG_01207","SJAG_00758"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89363,89734,91656,102651,107969,108467,114633],"is_not":false,"summary":null,"term":"GO:0000439"}]},"cv_name":"cellular_component","definition":"The 7 subunit core of TFIIH that is a part of either the general transcription factor holo-TFIIH or the nucleotide-excision repair factor 3 complex. In S. cerevisiae/humans the complex is composed of: Ssl2/XPB, Tfb1/p62, Tfb2/p52, Ssl1/p44, Tfb4/p34, Tfb5/p8 and Rad3/XPD.","definition_xrefs":["PMID:22308316","PMID:14500720","PMID:23028141","PMID:17215295","PMID:22572993","GOC:ew","GOC:krc","PMID:7813015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00512":null,"SJAG_00758":null,"SJAG_00901":null,"SJAG_00995":null,"SJAG_01207":null,"SJAG_03206":null,"SJAG_04368":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"transcription factor TFIIH core complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000441"],"synonyms":[{"name":"SSL2-core TFIIH complex","type":"exact"},{"name":"core TFIIH complex","type":"exact"}],"termid":"GO:0000439","terms_by_termid":{"GO:0000439":null}}


id: MOD:00090
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to L-alanine amide.","definition_xrefs":["PubMed:2069951","PubMed:1377792","PubMed:8472537","RESID:AA0081","PubMed:952951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-alanine amide","synonyms":[{"name":"(2S)-2-aminopropanamide","type":"exact"},{"name":"AlaN","type":"exact"},{"name":"L-alanine amide","type":"exact"},{"name":"MOD_RES Alanine amide","type":"exact"},{"name":"alaninamide","type":"exact"},{"name":"amidated L-alanine","type":"exact"}],"termid":"MOD:00090"}


id: PATO:0000671
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000671 water value (obsolete PATO:0000671)","termid":"PATO:0000671"}


id: MONDO:0008157
data:
  {"annotated_genes":["SJAG_03449"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84832],"is_not":false,"summary":null,"term":"MONDO:0008157"}]},"cv_name":"mondo","definition":"Buschke-Ollendorff syndrome (BOS) is a benign disorder characterized by the association of osteopoikilosis lesions (``spotted bones'') in the skeleton and connective tissue nevi in the skin.","definition_xrefs":["Orphanet:1306"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"osteopetrosis","termid":"MONDO:0017198"},{"relation_name":"excluded_subClassOf","term_name":"obsolete dermis elastic tissue disorder (obsolete MONDO:0019292)","termid":"MONDO:0019292"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"laminopathy","termid":"MONDO:0021106"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03449":null},"genotype_count":0,"is_obsolete":false,"name":"Buschke-Ollendorff syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:1044","MEDGEN:120545","DOID:0111536","OMIM:166700","icd11.foundation:1556522143","UMLS:C0265514","MESH:C537415"],"synonyms":[{"name":"Bos","type":"related"},{"name":"Buschke Ollendorff syndrome","type":"related"},{"name":"Buschke-Ollendorff syndrome","type":"exact"},{"name":"Dermatoosteopoikilosis","type":"related"},{"name":"dermatofibrosis lenticularis disseminata with osteopoikilosis","type":"related"},{"name":"dermatofibrosis lenticularis disseminata, isolated","type":"related"},{"name":"dermatofibrosis, disseminated with osteopoikilosis","type":"related"},{"name":"dermatofibrosis, disseminated, with osteopoikilosis","type":"related"},{"name":"disseminated dermatofibrosis with osteopoikilosis","type":"exact"},{"name":"osteopathia condensans disseminata","type":"related"},{"name":"osteopoikilosis with melorheostosis","type":"related"},{"name":"osteopoikilosis with or without melorheostosis","type":"exact"},{"name":"osteopoikilosis, isolated","type":"related"}],"termid":"MONDO:0008157","terms_by_termid":{"MONDO:0008157":null},"xrefs":{"Monarch":{"xref_id":"0008157"}}}


id: SO:0002257
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytologically observable heterochromatic regions of chromosomes away from centromeres that contain predominatly large tandem repeats and retrotransposons.","definition_xrefs":["PMID:6439888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"knob","synonyms":[{"name":"Heterochromatin Knob","type":"exact"}],"termid":"SO:0002257"}


id: GO:0062095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of an endoplasmic reticulum membrane to a peroxisome via molecular tethers that physically bridge the two membranes and attach them to each other.","definition_xrefs":["PMID:28463579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome localization","termid":"GO:0060151"},{"relation_name":"is_a","term_name":"organelle localization by membrane tethering","termid":"GO:0140056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0140056","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum-peroxisome tethering","termid":"GO:0062095"}


id: PBO:0058987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLLT10 pseudogene 1","termid":"PBO:0058987"}


id: PBO:0081700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 622","termid":"PBO:0081700"}


id: FYPO:0002388
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of riboflavin binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abnormal riboflavin binding","termid":"FYPO:0002388"}


id: MONDO:0012934
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukemia, chronic lymphocytic, susceptibility to, 3","secondary_identifiers":["MEDGEN:382621","OMIM:612557","UMLS:C2675516"],"synonyms":[{"name":"Clls3","type":"related"},{"name":"leukemia, chronic lymphocytic, susceptibility to, 3","type":"exact"},{"name":"leukemia, chronic lymphocytic, susceptibility to, type 3","type":"exact"}],"termid":"MONDO:0012934","xrefs":{"Monarch":{"xref_id":"0012934"}}}


id: GO:0070316
data:
  {"annotated_genes":["SJAG_03689","SJAG_03356","SJAG_02621"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115480,99062,117589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070317"}]},"cv_name":"biological_process","definition":"A cell cycle process that modulates the rate or extent of the transition from the G0 quiescent state to the G1 phase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"regulates","term_name":"G0 to G1 transition","termid":"GO:0045023"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03356":null,"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of G0 to G1 transition","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070316","terms_by_termid":{"GO:0070317":null}}


id: PBO:0082727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rix1 complex and possibly pre-replicative complexes; required for processing of ITS2 sequences from 35S pre-rRNA; component of the pre-60S ribosomal particle with the dynein-related AAA-type ATPase Mdn1p; required for pre-replicative complex (pre-RC) formation and maintenance during DNA replication licensing; relocalizes to the cytosol in response to hypoxia; essential gene","termid":"PBO:0082727"}


id: PBO:0069952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1245, pseudogene","termid":"PBO:0069952"}


id: GO:0055024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac muscle tissue development.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of striated muscle tissue development","termid":"GO:0016202"},{"relation_name":"regulates","term_name":"cardiac muscle tissue development","termid":"GO:0048738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle tissue development","synonyms":[{"name":"regulation of heart muscle development","type":"exact"}],"termid":"GO:0055024"}


id: PBO:0052803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 43, pseudogene","termid":"PBO:0052803"}


id: PBO:0073135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC16 homolog A, endoplasmic reticulum export factor","termid":"PBO:0073135"}


id: PBO:0090378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin-protein ligase E3 Ptr1-like","termid":"PBO:0090378"}


id: PBO:0065353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN13 like Y-linked pseudogene 3","termid":"PBO:0065353"}


id: MONDO:0009161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of Ehlers-Danlos syndrome (EDS) characterized by extreme skin fragility and laxity, a prominent facial gestalt, excessive bruising and, sometimes, major complications due to visceral and vascular fragility.","definition_xrefs":["Orphanet:1901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, dermatosparaxis type","secondary_identifiers":["SCTID:55711009","DOID:0080733","MEDGEN:397792","MESH:C567527","icd11.foundation:445808781","GARD:2089","NANDO:1200651","OMIM:225410","UMLS:C2700425","NANDO:2201261"],"synonyms":[{"name":"EDS 7C","type":"related"},{"name":"EDS VIIC","type":"exact"},{"name":"EDS7C","type":"related"},{"name":"EDSDERMS","type":"related"},{"name":"Ehlers-Danlos syndrome type 7C","type":"exact"},{"name":"Ehlers-Danlos syndrome type 7C (formerly)","type":"related"},{"name":"Ehlers-Danlos syndrome, dermatosparaxis type","type":"exact"},{"name":"Ehlers-Danlos syndrome, type VII, autosomal recessive","type":"related"},{"name":"dEDS","type":"related"},{"name":"dermatosparaxis","type":"related"},{"name":"dermatosparaxis EDS","type":"related"},{"name":"dermatosparaxis Ehlers-Danlos syndrome","type":"related"}],"termid":"MONDO:0009161","xrefs":{"Monarch":{"xref_id":"0009161"}}}


id: MONDO:0006083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete anaplastic large cell lymphoma, ALK-negative (obsolete MONDO:0006083)","termid":"MONDO:0006083","xrefs":{"Monarch":{"xref_id":"0006083"}}}


id: MONDO:0000365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary congenital glaucoma (PCG) is characterized by elevated intraocular pressure (IOP), enlargement of the globe (buphthalmos), edema, and opacification of the cornea with rupture of Descemet's membrane (Haab's striae), thinning of the anterior sclera and iris atrophy, anomalously deep anterior chamber, and structurally normal posterior segment except for progressive glaucomatous optic atrophy. Symptoms include photophobia, blepharospasm, and excessive tearing. Typically, the diagnosis is made in the first year of life. Depending on when treatment is instituted, visual acuity may be reduced and/or visual fields may be restricted. In untreated individuals, blindness invariably occurs.","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital glaucoma","termid":"MONDO:0020366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"primary congenital glaucoma","secondary_identifiers":["UMLS:C1533041","MEDGEN:288550","SCTID:415176004","HP:0008007","DOID:0050593","icd11.foundation:517092878","NCIT:C150251"],"synonyms":[{"name":"primary congenital glaucoma","type":"exact"},{"name":"primary congenital glaucoma (disease)","type":"exact"}],"termid":"MONDO:0000365","xrefs":{"Monarch":{"xref_id":"0000365"}}}


id: MONDO:0014542
data:
  {"annotated_genes":["SJAG_04821"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84896],"is_not":false,"summary":null,"term":"MONDO:0014542"}]},"cv_name":"mondo","definition":"Any congenital myasthenic syndrome in which the cause of the disease is a mutation in the ALG14 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital myasthenic syndrome","termid":"MONDO:0018940"},{"relation_name":"is_a","term_name":"ALG14-congenital disorder of glycosylation","termid":"MONDO:0100559"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04821":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066","MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 15","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4015596","DOID:0110658","MEDGEN:864033","GARD:18453","OMIM:616227"],"synonyms":[{"name":"ALG14 congenital myasthenic syndrome","type":"exact"},{"name":"CMS15","type":"exact"},{"name":"congenital myasthenic syndrome 15 without tubular aggregates","type":"exact"},{"name":"congenital myasthenic syndrome caused by mutation in ALG14","type":"exact"},{"name":"congenital myasthenic syndrome type 15","type":"exact"},{"name":"myasthenic syndrome, congenital, 15","type":"related"},{"name":"myasthenic syndrome, congenital, 15, without tubular aggregates","type":"exact"},{"name":"myasthenic syndrome, congenital, type 15","type":"exact"},{"name":"myasthenic syndrome, congenital, without tubular aggregates","type":"related"}],"termid":"MONDO:0014542","terms_by_termid":{"MONDO:0014542":null},"xrefs":{"Monarch":{"xref_id":"0014542"}}}


id: PR:000000001
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An amino acid chain that is produced de novo by ribosome-mediated translation of a genetically-encoded mRNA.","definition_xrefs":["PRO:DAN","PRO:WCB"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein","termid":"PR:000000001"}


id: MONDO:1010428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atherosclerosis that occurs in rock pigeon.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"atherosclerosis, non-human animal","termid":"MONDO:1010008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atherosclerosis, rock pigeon","secondary_identifiers":["OMIA:000080-8932"],"termid":"MONDO:1010428","xrefs":{"Monarch":{"xref_id":"1010428"}}}


id: PBO:0048912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member G","termid":"PBO:0048912"}


id: PBO:0077221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane BAX inhibitor motif containing 4","termid":"PBO:0077221"}


id: _global:starts_during
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"_global:temporally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"starts_during","secondary_identifiers":["RO:0002091"],"termid":"_global:starts_during"}


id: PR:000027552
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A.2 that has been post-translationally modified to include at least one phosphorylated residue.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A.2","termid":"PR:000027545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A.2 phosphorylated form","synonyms":[{"name":"HTA2/PhosRes+","type":"exact"}],"termid":"PR:000027552"}


id: PBO:0044279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine receptor 2 pseudogene 1","termid":"PBO:0044279"}


id: MONDO:0030004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, 20","secondary_identifiers":["MEDGEN:1717195","OMIM:618830","UMLS:C5394226"],"synonyms":[{"name":"AUTISM, SUSCEPTIBILITY TO, 20","type":"exact"},{"name":"AUTS20","type":"exact"},{"name":"autism, susceptibility to, 20","type":"exact"}],"termid":"MONDO:0030004","xrefs":{"Monarch":{"xref_id":"0030004"}}}


id: PBO:0031018
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_cell_cycle_phase_transition","termid":"PBO:0031018"}


id: PBO:0012035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein involved in ER-nucleus signaling (predicted)","termid":"PBO:0012035"}


id: GO:0015539
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: hexuronate(out) + cation(out) = hexuronate(in) + cation(in). The hexuronate may be glucuronate or galacturonate.","definition_xrefs":["TC:2.A.1.14.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:monoatomic cation symporter activity","termid":"GO:0015294"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"hexuronate:monoatomic cation symporter activity","synonyms":[{"name":"hexuronate (glucuronate/galacturonate) porter activity","type":"narrow"},{"name":"hexuronate porter activity","type":"related"},{"name":"hexuronate:cation symporter activity","type":"broad"}],"termid":"GO:0015539"}


id: PBO:0074254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier organic anion transporter family member 1B7 (putative)","termid":"PBO:0074254"}


id: PBO:0052110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily A regulatory beta subunit 3","termid":"PBO:0052110"}


id: GO:0046912
data:
  {"annotated_genes":["SJAG_04688","SJAG_01922","SJAG_02841","SJAG_04499"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003852"},{"annotations":[98967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004108"},{"annotations":[101430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004410"},{"annotations":[97534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004421"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor), with the acyl group being converted into alkyl on transfer.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity","termid":"GO:0016746"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01922":null,"SJAG_02841":null,"SJAG_04499":null,"SJAG_04688":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"acyltransferase activity, acyl groups converted into alkyl on transfer","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.3.3.-"],"synonyms":[{"name":"acyltransferase, acyl groups converted into alkyl on transfer","type":"exact"},{"name":"transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer","type":"exact"}],"termid":"GO:0046912","terms_by_termid":{"GO:0003852":null,"GO:0004108":null,"GO:0004410":null,"GO:0004421":null}}


id: PBO:0028075
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_arrest_with_single_nucleus","termid":"PBO:0028075"}


id: MONDO:0019878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"3q26 microduplication syndrome is a rare chromosomal anomaly characterized by prenatal and postnatal growth retardation, developmental delay, intellectual impairment, dysmorphic signs and variable combination of congenital anomalies, including cardiovascular, genitourinary and skeletal anomalies and spectrum of caudal malformations.","definition_xrefs":["Orphanet:96095"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete chromosomal anomaly with cataract (obsolete MONDO:0020226)","termid":"MONDO:0020226"},{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 3","termid":"MONDO:0016954"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3q26 microduplication syndrome","secondary_identifiers":["GARD:19311","MEDGEN:1670584","UMLS:C4755319"],"synonyms":[{"name":"Cornelia de Lange-like syndrome","type":"exact"},{"name":"dup(3)(q26)","type":"exact"},{"name":"dup(3q) syndrome","type":"exact"},{"name":"trisomy 3q26","type":"exact"}],"termid":"MONDO:0019878","xrefs":{"Monarch":{"xref_id":"0019878"}}}


id: FYPO:0007982
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which all detectable microtubules are present in a single bundle and are not normally crosslinked, resulting in an aster-like organisation. See PMID:15068790.","definition_xrefs":["PomBase:mlr","PMID:15068790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single microtubule bundle during mitotic interphase","termid":"FYPO:0002400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000054","FYPO:0002399","FYPO:0001320"],"is_obsolete":false,"name":"single microtubule bundle with aster-like microtubules","termid":"FYPO:0007982"}


id: MONDO:1011402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 2 diabetes mellitus that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes mellitus, non-human animal","termid":"MONDO:1010052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 2 diabetes mellitus, non-human animal","secondary_identifiers":["OMIA:000284"],"termid":"MONDO:1011402","xrefs":{"Monarch":{"xref_id":"1011402"}}}


id: GO:0021963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the spinal cord towards target cells in the thalamus. This axonal process is a member of those that make up the spinothalamic tract, one of the major routes of nociceptive signaling.","definition_xrefs":["GOC:dph","GOC:cls","GOC:dgh","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinothalamic tract morphogenesis","synonyms":[{"name":"dorsolateral tract of Lissauer morphogenesis","type":"exact"}],"termid":"GO:0021963"}


id: GO:0072585
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: xanthosine + H2O = D-ribose + xanthine.","definition_xrefs":["GOC:kad","MetaCyc:RXN0-363","PMID:21235647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleosidase activity","termid":"GO:0008477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"xanthosine nucleotidase activity","secondary_identifiers":["RHEA:27994"],"synonyms":[{"name":"xanthosine ribohydrolase activity","type":"exact"}],"termid":"GO:0072585"}


id: PBO:0085194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ornithine decarboxylase; catalyzes the first step in polyamine biosynthesis; degraded in a proteasome-dependent manner in the presence of excess polyamines; deletion decreases lifespan, and increases necrotic cell death and ROS generation","termid":"PBO:0085194"}


id: GO:0005371
data:
  {"annotated_genes":["SJAG_01872","SJAG_00275"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111758],"is_not":false,"summary":null,"term":"GO:0005371"},{"annotations":[91266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071913"}]},"cv_name":"molecular_function","definition":"Enables the transfer of tricarboxylate from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00275":null,"SJAG_01872":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"tricarboxylate secondary active transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0005370"],"synonyms":[{"name":"tricarboxylate carrier activity","type":"exact"}],"termid":"GO:0005371","terms_by_termid":{"GO:0005371":null,"GO:0071913":null}}


id: PBO:0040741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCR pseudogene 7","termid":"PBO:0040741"}


id: PBO:0054068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1415","termid":"PBO:0054068"}


id: GO:0030832
data:
  {"annotated_genes":["SJAG_04100","SJAG_02700","SJAG_00521","SJAG_03086","SJAG_02566","SJAG_01993","SJAG_01894","SJAG_00279","SJAG_04479"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113813,91809,98398,87732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[102243,104660,101248,90158,89304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030833"}]},"cv_name":"biological_process","definition":"Any process that controls the length of actin filaments in a cell.","definition_xrefs":["GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component size","termid":"GO:0032535"},{"relation_name":"is_a","term_name":"regulation of actin cytoskeleton organization","termid":"GO:0032956"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_04100":null,"SJAG_04479":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"regulation of actin filament length","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030832","terms_by_termid":{"GO:0030833":null,"GO:0051016":null}}


id: PBO:0028572
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_M_phase_without_septation","termid":"PBO:0028572"}


id: PBO:0047421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and WD repeat domain containing 11","termid":"PBO:0047421"}


id: PBO:0041536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 17 open reading frame 67","termid":"PBO:0041536"}


id: PBO:0048358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 69","termid":"PBO:0048358"}


id: PBO:0089331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V0 subunit d","termid":"PBO:0089331"}


id: GO:0030351
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: inositol-1,3,4,5,6-pentakisphosphate + H2O = inositol-1,4,5,6-tetrakisphosphate + phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol pentakisphosphate phosphatase activity","termid":"GO:0052827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"inositol-1,3,4,5,6-pentakisphosphate 3-phosphatase activity","secondary_identifiers":["Reactome:R-HSA-1855163"],"termid":"GO:0030351"}


id: FYPO:0006767
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a cyclin-dependent protein kinase activity is increased during the meiotic cell cycle, in cells that have not arrested the meiotic cell cycle under conditions that normally trigger meiotic DNA replication checkpoint signaling and response.","definition_xrefs":["PomBase:mah","PMID:10521402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cyclin-dependent protein kinase activity","termid":"FYPO:0004319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"increased cyclin-dependent protein kinase activity in absence of meiotic DNA replication checkpoint arrest","synonyms":[{"name":"increased cyclin-dependent protein kinase activity with abolished meiotic DNA replication checkpoint arrest","type":"exact"}],"termid":"FYPO:0006767"}


id: GO:0005969
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein homodimeric complex that catalyzes the formation of hydroxypyruvate and alanine from serine and pyruvate.","definition_xrefs":["PMID:22751661","PMID:851432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"serine-pyruvate aminotransferase complex","secondary_identifiers":["GO:0005970"],"synonyms":[{"name":"serine-pyruvate aminotransferase, type 1 complex","type":"narrow"},{"name":"serine-pyruvate aminotransferase, type 2B complex","type":"narrow"}],"termid":"GO:0005969"}


id: MONDO:0003405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A germ cell tumor of the central nervous system occurring in adults.","definition_xrefs":["NCIT:C6285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system germ cell tumor","termid":"MONDO:0003000"},{"relation_name":"is_a","term_name":"adult germ cell tumor","termid":"MONDO:0044878"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adult central nervous system germ cell tumor","secondary_identifiers":["DOID:5349","UMLS:C0280796","MEDGEN:128893"],"synonyms":[{"name":"adult CNS germ cell neoplasm","type":"exact"},{"name":"adult CNS germ cell tumor","type":"exact"},{"name":"adult CNS germ cell tumour","type":"exact"},{"name":"adult central nervous system germ cell neoplasm","type":"exact"},{"name":"adult central nervous system germ cell tumor","type":"exact"},{"name":"central nervous system adult germ cell tumor","type":"related"},{"name":"central nervous system adult germ cell tumour","type":"related"},{"name":"central nervous system germ cell tumor","type":"broad"},{"name":"central nervous system germ cell tumor of adults","type":"exact"},{"name":"central nervous system germ cell tumour","type":"broad"},{"name":"central nervous system germ cell tumour of adults","type":"exact"},{"name":"germ cell neoplasm of adult CNS","type":"exact"},{"name":"germ cell neoplasm of adult central nervous system","type":"exact"},{"name":"germ cell neoplasm of the adult CNS","type":"exact"},{"name":"germ cell neoplasm of the adult central nervous system","type":"exact"},{"name":"germ cell tumor of adult CNS","type":"exact"},{"name":"germ cell tumor of adult central nervous system","type":"exact"},{"name":"germ cell tumor of the adult CNS","type":"exact"},{"name":"germ cell tumor of the adult central nervous system","type":"exact"},{"name":"germ cell tumour of adult CNS","type":"exact"},{"name":"germ cell tumour of adult central nervous system","type":"exact"},{"name":"germ cell tumour of the adult CNS","type":"exact"},{"name":"germ cell tumour of the adult central nervous system","type":"exact"}],"termid":"MONDO:0003405","xrefs":{"Monarch":{"xref_id":"0003405"}}}


id: PBO:0080754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-C motif chemokine ligand 2","termid":"PBO:0080754"}


id: MONDO:0023692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A maple syrup urine disease caused by mutations in BCKDHB.","direct_ancestors":[{"relation_name":"is_a","term_name":"maple syrup urine disease","termid":"MONDO:0009563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"maple syrup urine disease type 1B","secondary_identifiers":["OMIM:620698","MEDGEN:443951","GARD:8597","UMLS:C2930990"],"synonyms":[{"name":"MSUD due to deficiency of E1-beta subunit of branched-chain alpha-keto acid dehydrogenase complex","type":"related"},{"name":"MSUD type 3 (formerly)","type":"related"},{"name":"MSUD type IB","type":"related"},{"name":"maple syrup urine disease type 1B","type":"exact"}],"termid":"MONDO:0023692","xrefs":{"Monarch":{"xref_id":"0023692"}}}


id: MONDO:0010730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"combined immunodeficiency","termid":"MONDO:0015131"},{"relation_name":"is_a","term_name":"T-B+ severe combined immunodeficiency","termid":"MONDO:0044200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"combined immunodeficiency, X-linked","secondary_identifiers":["EFO:1001451","OMIM:312863"],"synonyms":[{"name":"CIDX","type":"related"},{"name":"Xcid","type":"related"},{"name":"combined immunodeficiency, X-linked","type":"exact"},{"name":"combined immunodeficiency, X-linked, moderate, X-linked recessive","type":"exact"},{"name":"immunodeficiency 6","type":"related"}],"termid":"MONDO:0010730","xrefs":{"Monarch":{"xref_id":"0010730"}}}


id: GO:0014069
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron dense network of proteins within and adjacent to the postsynaptic membrane of an asymmetric, neuron-neuron synapse. Its major components include neurotransmitter receptors and the proteins that spatially and functionally organize them such as anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components.","definition_xrefs":["PMID:14532281","GOC:dos","GOC:jid","GOC:pr","GOC:ef","Wikipedia:Postsynaptic_density","GOC:BHF","GOC:sjp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic specialization","termid":"GO:0099572"},{"relation_name":"part_of","term_name":"asymmetric synapse","termid":"GO:0032279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic density","secondary_identifiers":["GO:0097483","GO:0097481","NIF_Subcellular:sao1196688972"],"synonyms":[{"name":"neuronal postsynaptic density","type":"exact"},{"name":"post synaptic density","type":"exact"},{"name":"post-synaptic density","type":"exact"},{"name":"postsynaptic density of dendrite","type":"narrow"}],"termid":"GO:0014069"}


id: PR:O74956
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrps8 gene.","definition_xrefs":["UniProtKB:O74956","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein subunit S8, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.10c","synonyms":[{"name":"Spom972h-mrps8","type":"exact"}],"termid":"PR:O74956"}


id: GO:0002289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a NK T cell population by cell division as part of an immune response.","definition_xrefs":["GOC:add","PMID:15771592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NK T cell proliferation","termid":"GO:0001866"},{"relation_name":"is_a","term_name":"NK T cell activation involved in immune response","termid":"GO:0002288"},{"relation_name":"is_a","term_name":"alpha-beta T cell proliferation involved in immune response","termid":"GO:0002310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"NK T cell proliferation involved in immune response","synonyms":[{"name":"NK T cell proliferation during immune response","type":"related"},{"name":"NK T lymphocyte proliferation during immune response","type":"related"},{"name":"NK T-cell proliferation during immune response","type":"related"},{"name":"NK T-lymphocyte proliferation during immune response","type":"related"},{"name":"natural killer T lymphocyte proliferation during immune response","type":"related"},{"name":"natural killer T-cell proliferation during immune response","type":"related"},{"name":"natural killer T-lymphocyte proliferation during immune response","type":"related"}],"termid":"GO:0002289"}


id: PBO:0085675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in polar growth, functionally redundant with Boi2p; required for fusion of secretory vesicles with plasma membrane at sites of polarized growth; interacts with bud-emergence protein Bem1p; contains an SH3 (src homology 3) domain and a PH (pleckstrin homology) domain; relocalizes from bud neck to cytoplasm upon DNA replication stress; BOI1 has a paralog, BOI2, that arose from the whole genome duplication","termid":"PBO:0085675"}


id: PBO:0025496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-N ortholog Mis15","termid":"PBO:0025496"}


id: PBO:0000897
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates fbp1","termid":"PBO:0000897"}


id: GO:0046154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving rhodopsin, a brilliant purplish-red, light-sensitive visual pigment found in the rod cells of the retinas.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"},{"relation_name":"is_a","term_name":"eye pigment metabolic process","termid":"GO:0042441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhodopsin metabolic process","synonyms":[{"name":"rhodopsin metabolism","type":"exact"}],"termid":"GO:0046154"}


id: GO:0070420
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nonhomologous end joining complex that contains one or more Ku monomers and one or more DNA ligase molecules from the LigC or LigD family, and mediates nonhomologous end joining in bacteria.","definition_xrefs":["PMID:17938628","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonhomologous end joining complex","termid":"GO:0070419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Ku-DNA ligase complex","termid":"GO:0070420"}


id: GO:0006037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving cell wall chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues, found in the walls of cells.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cell wall chitin metabolic process (obsolete GO:0006037)","synonyms":[{"name":"cell wall chitin metabolism","type":"exact"}],"termid":"GO:0006037"}


id: PBO:0071203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 44","termid":"PBO:0071203"}


id: PBO:0049682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacylglutathione hydrolase","termid":"PBO:0049682"}


id: GO:1990672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a medial-Golgi-derived vesicle to the lipid bilayer membrane around the Golgi trans cisterna. Vesicles are involved in anterograde transport.","definition_xrefs":["PMID:24119662","PMID:16038056","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi vesicle fusion to target membrane","termid":"GO:0048210"},{"relation_name":"is_a","term_name":"vesicle fusion with Golgi apparatus","termid":"GO:0048280"},{"relation_name":"part_of","term_name":"inter-Golgi cisterna vesicle-mediated transport","termid":"GO:0048219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"medial-Golgi-derived vesicle fusion with Golgi trans cisterna membrane","termid":"GO:1990672"}


id: MONDO:0032910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 34","secondary_identifiers":["DOID:0112091","GARD:16378","UMLS:C5394053","OMIM:618776","MEDGEN:1720533"],"synonyms":[{"name":"MC1DN34","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 34","type":"related"}],"termid":"MONDO:0032910","xrefs":{"Monarch":{"xref_id":"0032910"}}}


id: PBO:0053900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1189","termid":"PBO:0053900"}


id: PBO:0063560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pelota mRNA surveillance and ribosome rescue factor","termid":"PBO:0063560"}


id: GO:2000715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maintenance of mitotic sister chromatid cohesion along the chromosome arms.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of maintenance of mitotic sister chromatid cohesion","termid":"GO:0034182"},{"relation_name":"regulates","term_name":"maintenance of mitotic sister chromatid cohesion, arms","termid":"GO:0071959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of maintenance of mitotic sister chromatid cohesion, arms","synonyms":[{"name":"regulation of maintenance of mitotic sister chromatin cohesion along arms","type":"exact"},{"name":"regulation of maintenance of sister chromatin cohesion along arms at mitosis","type":"exact"}],"termid":"GO:2000715"}


id: PBO:0084452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannose-ethanolamine phosphotransferase; involved in biosynthesis of the glycosylphosphatidylinositol (GPI) core structure, catalyzing the addition of a side chain ethanolamine phosphate to the alpha1,6-linked second mannose residue of the GPI lipid precursor;  integral component of endoplasmic reticulum membrane; mutations affect cell wall integrity; homolog of human PIGG","termid":"PBO:0084452"}


id: PBO:0085251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripherally bound inner membrane protein of the mitochondrial matrix; involved in membrane insertion of C-terminus of Cox2p, interacts genetically and physically with Cox18p","termid":"PBO:0085251"}


id: PBO:0063728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHACTR2 antisense RNA 1","termid":"PBO:0063728"}


id: PBO:0061943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily R member 1 pseudogene","termid":"PBO:0061943"}


id: GO:0010016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the shoot are generated and organized. The shoot is the part of a seed plant body that is usually above ground.","definition_xrefs":["ISBN:0877797099","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"shoot system development","termid":"GO:0048367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"shoot system morphogenesis","synonyms":[{"name":"shoot morphogenesis","type":"exact"}],"termid":"GO:0010016"}


id: GO:0106274
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginyl-[protein] + NAD+ = H+ + (ADP-D-ribosyl)-L-arginyl-[protein] + nicotinamide.","definition_xrefs":["RHEA:19149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD+-protein ADP-ribosyltransferase activity","termid":"GO:1990404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0140096","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"NAD+-protein-arginine ADP-ribosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-1972385","EC:2.4.2.31","MetaCyc:2.4.2.31-RXN","GO:0106275","GO:0003956"],"synonyms":[{"name":"ADP-ribosyltransferase activity","type":"broad"},{"name":"NAD(+):L-arginine ADP-D-ribosyltransferase activity","type":"exact"},{"name":"NAD(P)(+)--arginine ADP-ribosyltransferase activity","type":"exact"},{"name":"NAD(P)+-protein-arginine ADP-ribosyltransferase activity","type":"broad"},{"name":"NAD(P)+:L-arginine ADP-D-ribosyltransferase activity","type":"exact"},{"name":"NAD(P)+:protein-L-arginine ADP-D-ribosyltransferase activity","type":"related"},{"name":"NADP+-protein-arginine ADP-ribosyltransferase activity","type":"broad"},{"name":"mono(ADP-ribosyl)transferase activity","type":"broad"},{"name":"peptidyl-arginine ADP-ribosylation activity","type":"exact"},{"name":"protein-arginine ADP-ribosyltransferase activity","type":"exact"}],"termid":"GO:0106274"}


id: PBO:0043296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain containing 14A","termid":"PBO:0043296"}


id: PBO:0075702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SREK1IP1 pseudogene 2","termid":"PBO:0075702"}


id: MONDO:0016996
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Natural killer (NK)-cell enteropathy is a benign NK-cell lymphoproliferative disease characterized by minor abdominal symptoms (abdominal pain, diverticulosis, constipation and reflux) due to NK cell-derived lesions in the mucosal layer of the gastrointestinal tract and often mistaken for NK or T-cell lymphoma.","definition_xrefs":["Orphanet:263665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"NK-cell enteropathy","secondary_identifiers":["UMLS:C4509932","SCTID:723496007","MEDGEN:1379183","GARD:20905"],"termid":"MONDO:0016996","xrefs":{"Monarch":{"xref_id":"0016996"}}}


id: PBO:0034271
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_potential_to_develop_into","termid":"PBO:0034271"}


id: PBO:0027459
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_rotenone","termid":"PBO:0027459"}


id: PBO:0049575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B.W histone 3, pseudogene","termid":"PBO:0049575"}


id: PBO:0060229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYADM antisense RNA 1","termid":"PBO:0060229"}


id: GO:0023065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is conveyed via blood.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission via blood (obsolete GO:0023065)","synonyms":[{"name":"signal transmission via blood","type":"exact"}],"termid":"GO:0023065"}


id: PATO:0001749
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A heterochronic growth quality inhering in an organism, structure, or group of organisms by virtue of the bearer's reduced growth.","definition_xrefs":["PATOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochronic growth","termid":"PATO:0001490"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paedomorphic growth","synonyms":[{"name":"hypoplastic growth","type":"exact"},{"name":"pedomorphic growth","type":"exact"}],"termid":"PATO:0001749"}


id: PBO:0041670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcyclin binding protein pseudogene 3","termid":"PBO:0041670"}


id: PBO:0016562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein Nap2","termid":"PBO:0016562"}


id: MOD:00658
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to a methylated arginine, either 5-methylargine, N5-methylarginine, or an omega-N-methylated L-arginine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated arginine","synonyms":[{"name":"MeArg","type":"exact"}],"termid":"MOD:00658"}


id: PBO:0058992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanophilin","termid":"PBO:0058992"}


id: GO:0099634
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The membrane component of the postsynaptic specialization. This is the region of the postsynaptic membrane in which the population of neurotransmitter receptors involved in synaptic transmission are concentrated.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic membrane","termid":"GO:0097060"},{"relation_name":"part_of","term_name":"postsynaptic membrane","termid":"GO:0045211"},{"relation_name":"part_of","term_name":"postsynaptic specialization","termid":"GO:0099572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"postsynaptic specialization membrane","termid":"GO:0099634"}


id: GO:0032338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of inhibin from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocrine process","termid":"GO:0044060"},{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"regulates","term_name":"inhibin secretion","termid":"GO:0032334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of inhibin secretion","termid":"GO:0032338"}


id: PBO:0057538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 654","termid":"PBO:0057538"}


id: MONDO:0005777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition resulting from infection by Klebsiella granulomati, which is characterized by ulcerative lesions of the genitalia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"bacterial sexually transmitted disease","termid":"MONDO:0005323"},{"relation_name":"is_a","term_name":"Klebsiella infectious disease","termid":"MONDO:0030603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granuloma inguinale","secondary_identifiers":["NCIT:C3065","EFO:0007291","UMLS:C0018190","DOID:9113","MEDGEN:42291","icd11.foundation:764124124","ICD10CM:A58","ICD9:099.2","MESH:D006100","SCTID:28867007"],"synonyms":[{"name":"donovanosis","type":"exact"},{"name":"granuloma inguinale","type":"exact"},{"name":"pudendal ulcer","type":"exact"}],"termid":"MONDO:0005777","xrefs":{"Monarch":{"xref_id":"0005777"}}}


id: GO:0010214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the seed coat over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"seed development","termid":"GO:0048316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seed coat development","termid":"GO:0010214"}


id: PBO:0028078
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiple_mitotic_spindles_with_abolished_sister_chromatid_separation","termid":"PBO:0028078"}


id: MONDO:0004289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An exophytic, slow growing, well differentiated and non-metastasizing squamous cell carcinoma with pushing margins that arises from the glottic area of the larynx. It usually presents with hoarseness.","definition_xrefs":["NCIT:C8189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larynx verrucous carcinoma","termid":"MONDO:0002766"},{"relation_name":"is_a","term_name":"glottis squamous cell carcinoma","termid":"MONDO:0004080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"glottis verrucous carcinoma","secondary_identifiers":["MEDGEN:83631","UMLS:C0280329","DOID:7583"],"synonyms":[{"name":"glottic verrucous carcinoma","type":"exact"},{"name":"glottis verrucous carcinoma","type":"exact"},{"name":"verrucous carcinoma of glottis","type":"exact"},{"name":"verrucous carcinoma of the glottis","type":"exact"}],"termid":"MONDO:0004289","xrefs":{"Monarch":{"xref_id":"0004289"}}}


id: PBO:0054544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1944","termid":"PBO:0054544"}


id: GO:0009968
data:
  {"annotated_genes":["SJAG_01114","SJAG_03678","SJAG_00610","SJAG_01184","SJAG_03893","SJAG_00875","SJAG_03508","SJAG_02451","SJAG_04943","SJAG_01983","SJAG_02481","SJAG_03185","SJAG_00526","SJAG_02426","SJAG_00266","SJAG_02765","SJAG_00209","SJAG_05346","SJAG_01679","SJAG_02169","SJAG_04551","SJAG_04462","SJAG_04455","SJAG_03501","SJAG_02000","SJAG_00883","SJAG_02013","SJAG_00990","SJAG_02231","SJAG_03799","SJAG_03592","SJAG_06270","SJAG_03126","SJAG_03263","SJAG_03353","SJAG_02336","SJAG_04910","SJAG_01297","SJAG_04522","SJAG_01386","SJAG_03072","SJAG_02392","SJAG_00642","SJAG_00824","SJAG_02514","SJAG_02858","SJAG_00293","SJAG_01253","SJAG_04825","SJAG_02379","SJAG_02233","SJAG_01245","SJAG_01464","SJAG_01790","SJAG_00289","SJAG_04249","SJAG_05000","SJAG_00457","SJAG_00229","SJAG_01142","SJAG_00424","SJAG_02311","SJAG_00169","SJAG_03355","SJAG_04206","SJAG_00975","SJAG_04259","SJAG_03486","SJAG_03089","SJAG_00991","SJAG_03681"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107739,113763,99089,113275,90204,103394,106723,111451,115397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[115877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106072"},{"annotations":[99936,91572,107458,115878,92229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110034"},{"annotations":[115626,100493],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106057"},{"annotations":[98940,107100,103303,117813,95338,106534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[88913,101645,102343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902660"},{"annotations":[87681,106625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043409"},{"annotations":[93685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[116574,94518,95459,117814,91146,98942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903753"},{"annotations":[106626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180040"},{"annotations":[92805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090029"},{"annotations":[110855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046580"},{"annotations":[104836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035024"},{"annotations":[95126,91216,104530,106586,90208,100773,92323,109662,92940,92407,99091,106725,107030,115400,99169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[90722,105387,111204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000639"},{"annotations":[90745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032007"},{"annotations":[113470,114074,115981,102511,92811,116538,104624,93658,109168,112652,99073,106888,115627,87497,98377,108756,117727,110447,95586,100949,106639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904262"},{"annotations":[115772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903940"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"negative regulation of cell communication","termid":"GO:0010648"},{"relation_name":"is_a","term_name":"negative regulation of signaling","termid":"GO:0023057"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"negatively_regulates","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":71,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_00229":null,"SJAG_00266":null,"SJAG_00289":null,"SJAG_00293":null,"SJAG_00424":null,"SJAG_00457":null,"SJAG_00526":null,"SJAG_00610":null,"SJAG_00642":null,"SJAG_00824":null,"SJAG_00875":null,"SJAG_00883":null,"SJAG_00975":null,"SJAG_00990":null,"SJAG_00991":null,"SJAG_01114":null,"SJAG_01142":null,"SJAG_01184":null,"SJAG_01245":null,"SJAG_01253":null,"SJAG_01297":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01679":null,"SJAG_01790":null,"SJAG_01983":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_02169":null,"SJAG_02231":null,"SJAG_02233":null,"SJAG_02311":null,"SJAG_02336":null,"SJAG_02379":null,"SJAG_02392":null,"SJAG_02426":null,"SJAG_02451":null,"SJAG_02481":null,"SJAG_02514":null,"SJAG_02765":null,"SJAG_02858":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03126":null,"SJAG_03185":null,"SJAG_03263":null,"SJAG_03353":null,"SJAG_03355":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03678":null,"SJAG_03681":null,"SJAG_03799":null,"SJAG_03893":null,"SJAG_04206":null,"SJAG_04249":null,"SJAG_04259":null,"SJAG_04455":null,"SJAG_04462":null,"SJAG_04522":null,"SJAG_04551":null,"SJAG_04825":null,"SJAG_04910":null,"SJAG_04943":null,"SJAG_05000":null,"SJAG_05346":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of signal transduction","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0035467","Reactome:R-HSA-8849472"],"synonyms":[{"name":"down regulation of signal transduction","type":"exact"},{"name":"down-regulation of signal transduction","type":"exact"},{"name":"downregulation of signal transduction","type":"exact"},{"name":"inhibition of signal transduction","type":"narrow"},{"name":"negative regulation of signaling pathway","type":"related"},{"name":"negative regulation of signalling pathway","type":"related"}],"termid":"GO:0009968","terms_by_termid":{"GO:0031030":null,"GO:0032007":null,"GO:0035024":null,"GO:0043409":null,"GO:0046580":null,"GO:0090029":null,"GO:0106057":null,"GO:0106072":null,"GO:0110034":null,"GO:0140499":null,"GO:0180040":null,"GO:1902426":null,"GO:1902660":null,"GO:1903138":null,"GO:1903753":null,"GO:1903940":null,"GO:1904262":null,"GO:2000639":null}}


id: GO:0030049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sliding of actin thin filaments and myosin thick filaments past each other in muscle contraction. This involves a process of interaction of myosin located on a thick filament with actin located on a thin filament. During this process ATP is split and forces are generated.","definition_xrefs":["GOC:mtg_muscle","ISBN:0815316194","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin-myosin filament sliding","termid":"GO:0033275"},{"relation_name":"part_of","term_name":"muscle contraction","termid":"GO:0006936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle filament sliding","secondary_identifiers":["Reactome:R-HSA-390522"],"termid":"GO:0030049"}


id: GO:0009473
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome c7 (triheme) (obsolete GO:0009473)","synonyms":[{"name":"cytochrome c7 (triheme)","type":"exact"}],"termid":"GO:0009473"}


id: PR:P08965
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiosis protein mei2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PomBase:MAH","PMID:9062192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis protein mei2","termid":"PR:000027567"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis protein mei2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.03c","secondary_identifiers":["PR:000027568","UniProtKB:P08965"],"synonyms":[{"name":"SPAC27D7.03C","type":"related"},{"name":"Spom972h-mei2","type":"exact"}],"termid":"PR:P08965"}


id: GO:0043318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of cytotoxic T cell degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell mediated cytotoxicity","termid":"GO:0001915"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte degranulation","termid":"GO:0043301"},{"relation_name":"is_a","term_name":"regulation of cytotoxic T cell degranulation","termid":"GO:0043317"},{"relation_name":"negatively_regulates","term_name":"cytotoxic T cell degranulation","termid":"GO:0043316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"negative regulation of cytotoxic T cell degranulation","synonyms":[{"name":"down regulation of cytotoxic T cell degranulation","type":"exact"},{"name":"down-regulation of cytotoxic T cell degranulation","type":"exact"},{"name":"downregulation of cytotoxic T cell degranulation","type":"exact"},{"name":"inhibition of cytotoxic T cell degranulation","type":"narrow"},{"name":"negative regulation of cytotoxic T cell granule exocytosis","type":"exact"},{"name":"negative regulation of cytotoxic T lymphocyte degranulation","type":"exact"},{"name":"negative regulation of cytotoxic T lymphocyte granule exocytosis","type":"exact"},{"name":"negative regulation of cytotoxic T-cell degranulation","type":"exact"},{"name":"negative regulation of cytotoxic T-cell granule exocytosis","type":"exact"},{"name":"negative regulation of cytotoxic T-lymphocyte degranulation","type":"exact"},{"name":"negative regulation of cytotoxic T-lymphocyte granule exocytosis","type":"exact"}],"termid":"GO:0043318"}


id: PR:Q9C1W5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial import inner membrane translocase subunit Tim16 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12388:SF0","PRO:DNx","OMA:SCHPO02627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.10","secondary_identifiers":["UniProtKB:Q9C1W5"],"synonyms":[{"name":"Spom972h-PAM16","type":"exact"},{"name":"presequence translocated-associated motor subunit pam16 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9C1W5"}


id: PBO:0044047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and glycine rich protein 1","termid":"PBO:0044047"}


id: PBO:0082756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the septin ring that is required for cytokinesis; present at the ends of rod-like septin hetero-oligomers; C-terminal extension is important for recruitment of Bni5p to the mother-bud neck, which in turn is required for Myo1p recruitment and cytokinesis; undergoes sumoylation and phosphorylation during mitosis; protein abundance increases in response to DNA replication stress","termid":"PBO:0082756"}


id: GO:1905216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of RNA binding.","definition_xrefs":["GO_REF:0000059","GOC:bf","GOC:TermGenie","PMID:25116364","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of binding","termid":"GO:0051099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of RNA binding","synonyms":[{"name":"activation of RNA binding","type":"narrow"},{"name":"up regulation of RNA binding","type":"exact"},{"name":"up-regulation of RNA binding","type":"exact"},{"name":"upregulation of RNA binding","type":"exact"}],"termid":"GO:1905216"}


id: GO:0035215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Progression of the genital imaginal disc over time, from its initial formation through to its metamorphosis to form the adult terminalia, comprising the entire set of internal and external genitalia and analia. Both sexes of Drosophila have a single genital disc formed from the female and male genital primordia, and the anal primordium. The anal primordium develops in both sexes, forming either male or female analia. However, only one of the genital primordia develops in each sex, forming either the male or the female genitalia.","definition_xrefs":["ISBN:0879694238","PMID:11494318","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc development","termid":"GO:0007444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"genital disc development","termid":"GO:0035215"}


id: MONDO:1011181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteopetrosis that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteopetrosis, non-human animal","termid":"MONDO:1010300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteopetrosis, cattle","secondary_identifiers":["OMIA:000755-9913"],"termid":"MONDO:1011181","xrefs":{"Monarch":{"xref_id":"1011181"}}}


id: GO:0102377
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: steviol + UDP-alpha-D-glucose = H+ + steviolmonoside + UDP.","definition_xrefs":["RHEA:61732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"steviol 13-O glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13511"],"termid":"GO:0102377"}


id: MONDO:0020585
data:
  {"annotated_genes":["SJAG_02297","SJAG_00839","SJAG_02009","SJAG_05283","SJAG_04334","SJAG_00605","SJAG_02796","SJAG_04192","SJAG_04495"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010480"},{"annotations":[84949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009902"},{"annotations":[85168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009295"},{"annotations":[86556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009113"},{"annotations":[85672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013275"},{"annotations":[85954,85955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009340"},{"annotations":[85089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009950"},{"annotations":[85281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014221"}]},"cv_name":"mondo","definition":"Any form of anemia that results from the absence of, or the defective action of, any enzyme involved in erythropoiesis.","definition_xrefs":["NCIT:C131630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia due to enzyme disorder","termid":"MONDO:0020584"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00605":null,"SJAG_00839":null,"SJAG_02009":null,"SJAG_02297":null,"SJAG_02796":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"anemia due to erythrocyte enzyme disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4329304","MEDGEN:1383362"],"synonyms":[{"name":"anemia due to erythrocyte enzyme disorder","type":"exact"}],"termid":"MONDO:0020585","terms_by_termid":{"MONDO:0009113":null,"MONDO:0009295":null,"MONDO:0009340":null,"MONDO:0009902":null,"MONDO:0009950":null,"MONDO:0010480":null,"MONDO:0013275":null,"MONDO:0014221":null},"xrefs":{"Monarch":{"xref_id":"0020585"}}}


id: PBO:0055030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2445","termid":"PBO:0055030"}


id: MONDO:0013632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant nonsyndromic deafness that has material basis in variation in the chromosome region 13q34.","definition_xrefs":["DOID:0110562","PMID:19183916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 33","secondary_identifiers":["MEDGEN:854638","UMLS:C3887930","GARD:18135","OMIM:614211"],"synonyms":[{"name":"DFNA33","type":"narrow"},{"name":"autosomal dominant deafness 33","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 33","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 33","type":"narrow"},{"name":"deafness, autosomal dominant 33","type":"narrow"}],"termid":"MONDO:0013632","xrefs":{"Monarch":{"xref_id":"0013632"}}}


id: PBO:0055246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2673","termid":"PBO:0055246"}


id: GO:1900404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A positive regulation of transcription from RNA polymerase II promoter that results in positive regulation of DNA repair.","definition_xrefs":["GOC:mah","GOC:TermGenie","PMID:20299455"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of DNA repair by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900404)","synonyms":[{"name":"activation of DNA repair by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"stimulation of DNA repair by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of DNA repair by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of DNA repair by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of DNA repair by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900404"}


id: GO:0070383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an amino group from a cytosine residue in DNA, forming a uracil residue.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA deamination","termid":"GO:0045006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"DNA cytosine deamination","termid":"GO:0070383"}


id: PBO:0029581
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_pigment_accumulation_during_cellular_response_to_caffeine","termid":"PBO:0029581"}


id: PR:O74520
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trp663 gene.","definition_xrefs":["UniProtKB:O74520","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C663.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.14c","synonyms":[{"name":"Spom972h-trp663","type":"exact"}],"termid":"PR:O74520"}


id: MONDO:0004753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"strabismus","termid":"MONDO:0003432"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mechanical strabismus","secondary_identifiers":["UMLS:C0152223","DOID:9306","ICD10CM:H50.6","ICD9:378.60","ICD9:378.6","MEDGEN:101828","icd11.foundation:230827382","SCTID:5371001"],"termid":"MONDO:0004753","xrefs":{"Monarch":{"xref_id":"0004753"}}}


id: FYPO:0003899
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a triphosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abnormal triphosphatase activity","termid":"FYPO:0003899"}


id: PBO:0049201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIK1 antisense RNA 2","termid":"PBO:0049201"}


id: MONDO:1040033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital muscular dystrophy due to dystroglycanopathy characterized by a wide phenotypic spectrum which includes hypotonia and muscular weakness present at birth or early infancy, delayed or arrested motor development, and normal intellectual abilities with normal (or only mild abnormalities) neuroimaging studies. Feeding difficulties, joint and spinal deformities, and respiratory insufficiency may be associated. Decreased alpha-dystroglycan on immunohistochemical muscle staining and elevated serum creatine kinase are observed.","definition_xrefs":["Orphanet:370980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"congenital muscular dystrophy without intellectual disability","secondary_identifiers":["MEDGEN:1681503","UMLS:C5190847"],"synonyms":[{"name":"CMD without intellectual disability","type":"exact"},{"name":"CMD-no MR","type":"exact"},{"name":"congenital muscular dystrophy-dystroglycanopathy without intellectual disability","type":"exact"}],"termid":"MONDO:1040033","xrefs":{"Monarch":{"xref_id":"1040033"}}}


id: PATO:0001754
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A peramorphic growth quality which is due to an earlier onset.","definition_xrefs":["PATOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peramorphic growth","termid":"PATO:0001752"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"predisplaced growth","synonyms":[{"name":"precocious growth","type":"exact"}],"termid":"PATO:0001754"}


id: GO:0014809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle contraction via the regulation of the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol. The sarcoplasmic reticulum is the endoplasmic reticulum of striated muscle, specialised for the sequestration of calcium ions that are released upon receipt of a signal relayed by the T tubules from the neuromuscular junction.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum","termid":"GO:0010880"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction by calcium ion signaling","termid":"GO:0014722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion","termid":"GO:0014809"}


id: PBO:0035755
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_medial_membrane_band_assembly","termid":"PBO:0035755"}


id: GO:0003408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the optic cup, a two-walled vesicle formed from the optic vesicle.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"optic cup morphogenesis involved in camera-type eye development","termid":"GO:0002072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic cup formation involved in camera-type eye development","termid":"GO:0003408"}


id: PBO:0064173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group VII","termid":"PBO:0064173"}


id: MONDO:0800390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Toxicities following administration of chemotherapeutic agents","direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chemotherapy-induced toxicity","termid":"MONDO:0800390","xrefs":{"Monarch":{"xref_id":"0800390"}}}


id: GO:2001091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a nigerotrioseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisaccharide transport","termid":"GO:2001088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"nigerotriose transport","termid":"GO:2001091"}


id: PBO:0059742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 16","termid":"PBO:0059742"}


id: PBO:0084540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the p24 family involved in ER to Golgi transport; similar to Emp24p and Erv25p; ERP4 has a paralog, ERP2, that arose from the whole genome duplication","termid":"PBO:0084540"}


id: PBO:0091685
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translated non-conserved ORF in low complexity region","termid":"PBO:0091685"}


id: PBO:0090570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit Tho7","termid":"PBO:0090570"}


id: PATO:0000401
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000401 shape value (obsolete PATO:0000401)","termid":"PATO:0000401"}


id: PBO:0002170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ABC family iron transporter Atm1","termid":"PBO:0002170"}


id: MONDO:0015880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic diaphragmatic or thoracic malformation (obsolete MONDO:0015880)","secondary_identifiers":["Orphanet:180779"],"termid":"MONDO:0015880","xrefs":{"Monarch":{"xref_id":"0015880"}}}


id: PBO:0044448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 26, pseudogene","termid":"PBO:0044448"}


id: PBO:0044115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen 1B","termid":"PBO:0044115"}


id: GO:0044160
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The pigmented membrane of any host thylakoid.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"},{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"},{"relation_name":"part_of","term_name":"host thylakoid","termid":"GO:0044159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host thylakoid membrane","termid":"GO:0044160"}


id: PBO:0026733
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_kinetochore","termid":"PBO:0026733"}


id: GO:1903875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to corticosterone.","definition_xrefs":["PMID:10802282","GOC:mr","GOC:TermGenie","GO_REF:0000067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"},{"relation_name":"is_a","term_name":"steroid hormone binding","termid":"GO:1990239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"corticosterone binding","termid":"GO:1903875"}


id: GO:0106439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: L-lysine(out) + L-arginine(in) = L-lysine(in) + L-arginine(out).","definition_xrefs":["RHEA:70827","PMID:10903140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine transmembrane transporter activity","termid":"GO:0015189"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"L-arginine transmembrane transporter activity","termid":"GO:0061459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"L-lysine:L-arginine antiporter activity","termid":"GO:0106439"}


id: PBO:0017464
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_gene_product","termid":"PBO:0017464"}


id: GO:0010469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a signaling receptor activity. Receptor activity is when a molecule combines with an extracellular or intracellular messenger to initiate a change in cell activity.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of molecular function","termid":"GO:0065009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of signaling receptor activity","synonyms":[{"name":"regulation of receptor activity","type":"broad"},{"name":"regulation of signalling receptor activity","type":"exact"}],"termid":"GO:0010469"}


id: GO:0016596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to thienylcyclohexylpiperidine.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"thienylcyclohexylpiperidine binding","synonyms":[{"name":"TCP binding","type":"broad"}],"termid":"GO:0016596"}


id: PBO:0054814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2227","termid":"PBO:0054814"}


id: PR:P17476
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpp101 gene.","definition_xrefs":["UniProtKB:P17476","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein P1-alpha 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.15","synonyms":[{"name":"A1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpp101","type":"exact"}],"termid":"PR:P17476"}


id: GO:0005400
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisomal membrane transporter (obsolete GO:0005400)","synonyms":[{"name":"peroxisomal membrane transporter","type":"exact"}],"termid":"GO:0005400"}


id: GO:0008913
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a fatty acyl-[ACP] + an alpha-Kdo-(2->4)-alpha-Kdo-(2->6)-lipid IVA = an alpha-Kdo-(2->4)-alpha-Kdo-(2->6)-(acyl)-lipid IVA + holo-[ACP].","definition_xrefs":["EC:2.3.1.241","PMID:18656959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"Kdo2-lipid IVA acyltransferase activity","synonyms":[{"name":"(Kdo)2-lipid IVA lauroyltransferase","type":"related"},{"name":"Kdo2-lipid IVA lauroyltransferase","type":"related"},{"name":"alpha-Kdo-(2->4)-alpha-(2->6)-lipid IVA lauroyltransferase","type":"related"},{"name":"lauroyl transferase activity","type":"related"},{"name":"lauroyltransferase activity","type":"related"}],"termid":"GO:0008913"}


id: MOD:01137
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction of a lysine residue with 2,2,5,7,8-pentamethylchroman-6-sulfonyl chloride, Pmc chloride, to form N6-(2,2,5,7,8-pentamethylchroman-6-sulfonyl)-L-lysine.","definition_xrefs":["DeltaMass:310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"},{"relation_name":"is_a","term_name":"2,2,5,7,8-pentamethylchroman-6-sulfonyl chloride derivatized residue","termid":"MOD:01120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-(2,2,5,7,8-pentamethylchroman-6-sulfonyl)-L-lysine","synonyms":[{"name":"PMC lysyl","type":"exact"},{"name":"PmcLys","type":"exact"}],"termid":"MOD:01137"}


id: GO:1903962
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of arachidonate from one side of a membrane to the other.","definition_xrefs":["GOC:bhm","GOC:TermGenie","PMID:15642721","GO_REF:0000066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid transmembrane transporter activity","termid":"GO:0005324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"arachidonate transmembrane transporter activity","synonyms":[{"name":"arachidonate transporter activity","type":"related"},{"name":"arachidonic acid transporter activity","type":"related"}],"termid":"GO:1903962"}


id: GO:0042732
data:
  {"annotated_genes":["SJAG_02010","SJAG_03958","SJAG_04660","SJAG_04276"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118520],"is_not":false,"summary":null,"term":"GO:0042732"},{"annotations":[95239,94504,100680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042843"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-xylose, a naturally occurring plant polysaccharide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose metabolic process","termid":"GO:0019321"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02010":null,"SJAG_03958":null,"SJAG_04276":null,"SJAG_04660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"D-xylose metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"D-xylose metabolism","type":"exact"}],"termid":"GO:0042732","terms_by_termid":{"GO:0042732":null,"GO:0042843":null}}


id: PBO:0063384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"programmed cell death 4","termid":"PBO:0063384"}


id: GO:0071949
data:
  {"annotated_genes":["SJAG_02496","SJAG_00265","SJAG_03804","SJAG_03712","SJAG_02827","SJAG_04000","SJAG_04608","SJAG_01466","SJAG_02489","SJAG_01903","SJAG_02599","SJAG_01063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96131,97909,100966,102742,107923,109177,110320,111262,112505,114247,114277,117506],"is_not":false,"summary":null,"term":"GO:0071949"}]},"cv_name":"molecular_function","definition":"Binding to the oxidized form, FAD, of flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavin adenine dinucleotide binding","termid":"GO:0050660"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00265":null,"SJAG_01063":null,"SJAG_01466":null,"SJAG_01903":null,"SJAG_02489":null,"SJAG_02496":null,"SJAG_02599":null,"SJAG_02827":null,"SJAG_03712":null,"SJAG_03804":null,"SJAG_04000":null,"SJAG_04608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"FAD binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"oxidized flavin adenine dinucleotide binding","type":"exact"},{"name":"oxidized flavine-adenine dinucleotide binding","type":"exact"}],"termid":"GO:0071949","terms_by_termid":{"GO:0071949":null}}


id: PATO:0000438
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability quality inhering in a bearer by virtue of the bearer's lacking or not exhibiting variation.","definition_xrefs":["Dictionary:http://dictionary.reference.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability","termid":"PATO:0001303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invariant","synonyms":[{"name":"constant","type":"related"},{"name":"uniform","type":"exact"}],"termid":"PATO:0000438"}


id: GO:0060048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Muscle contraction of cardiac muscle tissue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle contraction","termid":"GO:0006941"},{"relation_name":"part_of","term_name":"heart contraction","termid":"GO:0060047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle contraction","synonyms":[{"name":"heart muscle contraction","type":"exact"}],"termid":"GO:0060048"}


id: GO:0102680
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + campest-4-en-3-one + O2 + NADPH = (22S)-22-hydroxycampest-4-en-3-one + H2O + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete campest-4-en-3-one hydroxylase activity (obsolete GO:0102680)","termid":"GO:0102680"}


id: PBO:0078358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 4-1","termid":"PBO:0078358"}


id: PBO:0050329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 31","termid":"PBO:0050329"}


id: GO:0030740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + myo-inositol = 1D-3-O-methyl-myo-inositol + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.39","RHEA:18877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"inositol 3-methyltransferase activity","secondary_identifiers":["MetaCyc:MYO-INOSITOL-1-O-METHYLTRANSFERASE-RXN","KEGG_REACTION:R01189"],"synonyms":[{"name":"S-adenosyl-L-methionine:1D-myo-inositol 3-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:myo-inositol 1-O-methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine:myo-inositol 1-methyltransferase activity","type":"related"},{"name":"inositol L-1-methyltransferase activity","type":"related"},{"name":"myo-inositol 1-O-methyltransferase (name based on 1L-numbering system and not 1D-numbering)","type":"related"},{"name":"myo-inositol 1-O-methyltransferase activity","type":"related"},{"name":"myo-inositol 1-methyltransferase activity","type":"related"}],"termid":"GO:0030740"}


id: GO:0061000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of dendritic spine development, the process whose specific outcome is the progression of the dendritic spine over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of dendritic spine development","termid":"GO:0060998"},{"relation_name":"negatively_regulates","term_name":"dendritic spine development","termid":"GO:0060996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dendritic spine development","termid":"GO:0061000"}


id: MONDO:0001201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0001201 (obsolete MONDO:0001201)","termid":"MONDO:0001201","xrefs":{"Monarch":{"xref_id":"0001201"}}}


id: MONDO:0019849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated micropenis","secondary_identifiers":["GARD:19292","Orphanet:95707","MEDGEN:1843275","UMLS:C5681560"],"termid":"MONDO:0019849","xrefs":{"Monarch":{"xref_id":"0019849"}}}


id: PBO:0090636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S4","termid":"PBO:0090636"}


id: GO:0098808
data:
  {"annotated_genes":["SJAG_05010"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91041],"is_not":false,"summary":null,"term":"GO:0098808"}]},"cv_name":"molecular_function","definition":"Binding to a 7-methylguanosine (m7G) group or derivative located at the 5' end of an mRNA molecule.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA cap binding","termid":"GO:0000339"},{"relation_name":"is_a","term_name":"mRNA binding","termid":"GO:0003729"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05010":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"mRNA cap binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0098808","terms_by_termid":{"GO:0098808":null}}


id: MONDO:0014584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital myasthenic syndrome characterized by autosomal recessive inheritance of postsynaptic neuromuscular junction defects resulting in rapid decay in endplate current and a failure to reach the threshold for depolarization and early onset progressive muscular weakness that has material basis in homozygous or compound heterozygous mutation in the CHRND gene on chromosome 2q37.","definition_xrefs":["PMID:25792100","DOID:0110665","PMID:11435464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic congenital myasthenic syndrome","termid":"MONDO:0020344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 3B","secondary_identifiers":["UMLS:C4225371","GARD:16085","OMIM:616322","MEDGEN:909404"],"synonyms":[{"name":"CMS3B","type":"exact"},{"name":"congenital myasthenic syndrome 3B, fast-channel","type":"exact"},{"name":"congenital myasthenic syndrome type 3B","type":"exact"},{"name":"myasthenic syndrome, congenital, 3B, FAST-channel","type":"related"}],"termid":"MONDO:0014584","xrefs":{"Monarch":{"xref_id":"0014584"}}}


id: SO:0001855
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence ACGCGT, bound by the transcription factor complex MBF (MCB-binding factor) and found in promoters of genes expressed during the G1/S transition of the cell cycle.","definition_xrefs":["PMID:16285853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCB","synonyms":[{"name":"MluI cell cycle box","type":"exact"}],"termid":"SO:0001855"}


id: PBO:0113137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucose-6-phosphate dehydrogenase (G6PD); catalyzes the first step of the pentose phosphate pathway; involved in adaptation to oxidative stress; negative regulator of nonselective autophagy, independent of Stb5p; protein abundance increases in response to DNA replication stress; homolog of human G6PD which is deficient in patients with hemolytic anemia; human G6PD can complement yeast zwf1 null mutant","termid":"PBO:0113137"}


id: GO:1901021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium ion transmembrane transporter activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ion transmembrane transporter activity","termid":"GO:0032414"},{"relation_name":"is_a","term_name":"regulation of calcium ion transmembrane transporter activity","termid":"GO:1901019"},{"relation_name":"is_a","term_name":"positive regulation of calcium ion transmembrane transport","termid":"GO:1904427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of calcium ion transmembrane transporter activity","synonyms":[{"name":"activation of calcium ion transmembrane transporter activity","type":"narrow"},{"name":"up regulation of calcium ion transmembrane transporter activity","type":"exact"},{"name":"up-regulation of calcium ion transmembrane transporter activity","type":"exact"},{"name":"upregulation of calcium ion transmembrane transporter activity","type":"exact"}],"termid":"GO:1901021"}


id: PBO:0048267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 5","termid":"PBO:0048267"}


id: PBO:0084365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipid-binding ER protein, enriched at nucleus-vacuolar junctions (NVJ); involved in nonvesicular transfer of ceramides from ER to Golgi; may be involved in sterol metabolism or signaling at the NVJ; contains a synaptotagmin-like-mitochondrial-lipid binding protein (SMP) domain; binds phosphatidylinositols and other lipids in a large-scale study; may interact with ribosomes, based on co-purification experiments","termid":"PBO:0084365"}


id: PBO:0053250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM homeobox 4","termid":"PBO:0053250"}


id: PBO:0039856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 22","termid":"PBO:0039856"}


id: PBO:0068981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 225, pseudogene","termid":"PBO:0068981"}


id: PBO:0068071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 376","termid":"PBO:0068071"}


id: MONDO:0970944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leigh syndrome, mitochondrial","secondary_identifiers":["OMIM:500017"],"termid":"MONDO:0970944","xrefs":{"Monarch":{"xref_id":"0970944"}}}


id: MONDO:0000683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An agnosia that is a loss of the ability to rely on visual cues to guide them directionally due to the inability to recognize objects.","definition_xrefs":["DOID:0060153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visual agnosia","termid":"MONDO:0000685"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"topographical agnosia","secondary_identifiers":["UMLS:C0271189","MEDGEN:78761","SCTID:83824009"],"termid":"MONDO:0000683","xrefs":{"Monarch":{"xref_id":"0000683"}}}


id: GO:0046672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of programmed cell death that occurs in the compound eye retina.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of compound eye retinal cell programmed cell death","termid":"GO:0046669"},{"relation_name":"is_a","term_name":"positive regulation of retinal cell programmed cell death","termid":"GO:0046670"},{"relation_name":"positively_regulates","term_name":"compound eye retinal cell programmed cell death","termid":"GO:0046667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of compound eye retinal cell programmed cell death","synonyms":[{"name":"activation of retinal cell programmed cell death","type":"broad"},{"name":"positive regulation of retinal cell programmed cell death","type":"broad"},{"name":"stimulation of retinal cell programmed cell death","type":"broad"},{"name":"up regulation of retinal cell programmed cell death","type":"broad"},{"name":"up-regulation of retinal cell programmed cell death","type":"broad"},{"name":"upregulation of retinal cell programmed cell death","type":"broad"}],"termid":"GO:0046672"}


id: PBO:0085272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal importomer complex component; integral peroxisomal membrane protein required for docking and translocation of peroxisomal matrix proteins; interacts with the PTS1 signal recognition factor Pex5p and the PTS2 signal recognition factor Pex7p; forms a complex with Pex14p and Pex17p; human homolog PEX13 complements yeast null mutant","termid":"PBO:0085272"}


id: MOD:01577
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems iTRAQ8plex-121 reporter+balance group.","definition_xrefs":["Unimod:731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated residue","termid":"MOD:01526"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 304.199039 Da","termid":"MOD:01584"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-121 reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01577"}


id: GO:0090605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which planktonically growing microorganisms aggregate and grow on solid substrates under the flow of a liquid and produce extracellular polymers that facilitate attachment and matrix formation, resulting in a change in the organisms' growth rate and gene transcription.","definition_xrefs":["GOC:di","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biofilm formation","termid":"GO:0042710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"submerged biofilm formation","synonyms":[{"name":"solid substrate biofilm formation","type":"related"}],"termid":"GO:0090605"}


id: PBO:0011477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striatin homolog Far8","termid":"PBO:0011477"}


id: PBO:0003665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial RNA-binding protein (predicted)","termid":"PBO:0003665"}


id: MONDO:0002040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Superficial infections of the skin or its appendages by any of various fungi.","definition_xrefs":["MESH:D003881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous mycosis","termid":"MONDO:0000254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermatomycosis","secondary_identifiers":["DOID:1563","UMLS:C0011630","SCTID:47382004","MEDGEN:8330","ICD9:111","ICD9:111.9"],"termid":"MONDO:0002040","xrefs":{"Monarch":{"xref_id":"0002040"}}}


id: SO:0002346
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Plastid rRNA is an RNA component of the small or large subunits of plastid (such as chloroplast) ribosomes.","definition_xrefs":["PMID:3044395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA","termid":"SO:0000252"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plastid_rRNA","synonyms":[{"name":"plastid rRNA","type":"exact"}],"termid":"SO:0002346"}


id: PATO:0000809
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000809 taste value (obsolete PATO:0000809)","termid":"PATO:0000809"}


id: GO:0044048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the other (symbiont) organism via a type V secretion system. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via protein secreted by type V secretion system (obsolete GO:0044048)","termid":"GO:0044048"}


id: MONDO:0005702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A subcutaneous mycosis that is a chronic subcutaneous fungal infection, which presents as nodular or verrucoid, ulcerated, or crusted skin lesions on exposed areas of skin caused by Fonsecaea pedrosoi, Fonsecaea compacta, Cladophialophora carrionii or Phialophora verrucosa. Histological examination reveals muriform cells (with perpendicular septations) or thick walled, dark-colored, rounded forms (copper pennies) that are characteristic of this infection.","definition_xrefs":["EFO:0007207"],"gene_count":0,"genotype_count":0,"name":"obsolete chromoblastomycosis (obsolete MONDO:0005702)","termid":"MONDO:0005702","xrefs":{"Monarch":{"xref_id":"0005702"}}}


id: PBO:0066115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS like family 10 member A","termid":"PBO:0066115"}


id: FYPO:0000741
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of cellular pigment accumulation is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular pigment accumulation phenotype","termid":"FYPO:0000739"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular pigment accumulation","synonyms":[{"name":"abnormal cellular pigment accumulation","type":"exact"},{"name":"altered colony color","type":"related"},{"name":"altered colony colour","type":"related"},{"name":"increased cellular pigment accumulation during mitotic cell cycle","type":"related"},{"name":"increased cellular pigment accumulation during vegetative growth","type":"exact"}],"termid":"FYPO:0000741"}


id: GO:0003942
data:
  {"annotated_genes":["SJAG_00636"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97657],"is_not":false,"summary":null,"term":"GO:0003942"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-L-glutamate 5-semialdehyde + NADP+ + phosphate = N-acetyl-5-glutamyl phosphate + NADPH + H+.","definition_xrefs":["RHEA:21588"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00636":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"N-acetyl-gamma-glutamyl-phosphate reductase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.2.1.38","MetaCyc:N-ACETYLGLUTPREDUCT-RXN"],"synonyms":[{"name":"N-acetyl-L-glutamate gamma-semialdehyde:NADP oxidoreductase (phosphorylating)","type":"related"},{"name":"N-acetyl-L-glutamate-5-semialdehyde:NADP+ 5-oxidoreductase (phosphorylating)","type":"related"},{"name":"N-acetyl-glutamate semialdehyde dehydrogenase activity","type":"related"},{"name":"N-acetylglutamate 5-semialdehyde dehydrogenase activity","type":"related"},{"name":"N-acetylglutamic gamma-semialdehyde dehydrogenase activity","type":"related"},{"name":"NAGSA dehydrogenase activity","type":"broad"},{"name":"reductase, acetyl-gamma-glutamyl phosphate","type":"related"}],"termid":"GO:0003942","terms_by_termid":{"GO:0003942":null}}


id: PBO:0045190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB6 pseudogene 3","termid":"PBO:0045190"}


id: PBO:0065470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase, 10 pseudogene 1","termid":"PBO:0065470"}


id: MONDO:0020570
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Brill-Zinsser disease (obsolete MONDO:0020570)","termid":"MONDO:0020570","xrefs":{"Monarch":{"xref_id":"0020570"}}}


id: PBO:0077611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMSB4X pseudogene 2","termid":"PBO:0077611"}


id: GO:0047421
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acyl-D-glutamate + H2O = D-glutamate + a carboxylate.","definition_xrefs":["EC:3.5.1.82","RHEA:12833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"N-acyl-D-glutamate deacylase activity","secondary_identifiers":["KEGG_REACTION:R01581","MetaCyc:3.5.1.82-RXN"],"synonyms":[{"name":"N-acyl-D-glutamate amidohydrolase activity","type":"related"}],"termid":"GO:0047421"}


id: GO:0019609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-hydroxyphenylacetate, 1,3-benzenediol monoacetate, also known as resorcinol monoacetate.","definition_xrefs":["PMID:6995433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"3-hydroxyphenylacetate metabolic process","synonyms":[{"name":"3-hydroxyphenylacetate metabolism","type":"exact"},{"name":"3HPA metabolic process","type":"exact"},{"name":"3HPA metabolism","type":"exact"}],"termid":"GO:0019609"}


id: GO:0050210
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dimethylallyl diphosphate + H2O = diphosphate + prenol.","definition_xrefs":["RHEA:21496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoric monoester hydrolase activity","termid":"GO:0016794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"prenyl-diphosphatase activity","secondary_identifiers":["EC:3.1.7.1","MetaCyc:PRENYL-PYROPHOSPHATASE-RXN"],"synonyms":[{"name":"prenol pyrophosphatase activity","type":"related"},{"name":"prenyl-diphosphate diphosphohydrolase activity","type":"related"},{"name":"prenyl-pyrophosphatase activity","type":"exact"},{"name":"prenylphosphatase activity","type":"related"}],"termid":"GO:0050210"}


id: FYPO:0006472
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of translation of one or more proteins involved in amino acid biosynthesis is decreased in response to starvation for one or more amino acids.","definition_xrefs":["PomBase:mah","PMID:29432178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased translation of amino acid biosynthesis proteins during vegetative growth","termid":"FYPO:0006445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased translation of amino acid biosynthesis proteins in response to amino acid starvation","synonyms":[{"name":"decreased translation of amino acid biosynthesis genes in response to amino acid starvation","type":"exact"},{"name":"decreased translation of amino acid biosynthesis mRNAs in response to amino acid starvation","type":"exact"},{"name":"decreased translation of amino acid biosynthesis proteins during cellular response to amino acid starvation","type":"exact"},{"name":"decreased translation of amino acid biosynthesis proteins in response to amino acid starvation during mitotic cell cycle","type":"related"},{"name":"decreased translation of amino acid biosynthesis proteins in response to amino acid starvation during vegetative growth","type":"exact"},{"name":"reduced translation of amino acid biosynthesis proteins in response to amino acid starvation","type":"exact"}],"termid":"FYPO:0006472"}


id: MONDO:0015996
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete systemic capillary leak syndrome (obsolete MONDO:0015996)","termid":"MONDO:0015996","xrefs":{"Monarch":{"xref_id":"0015996"}}}


id: PBO:0049830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparin binding growth factor pseudogene 1","termid":"PBO:0049830"}


id: GO:0016296
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: hexadecanoyl-[ACP] + H2O = H+ + hexadecanoate + holo-[ACP].","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete palmitoyl-[acyl-carrier-protein] hydrolase activity (obsolete GO:0016296)","synonyms":[{"name":"palmitoyl-ACP hydrolase activity","type":"exact"},{"name":"palmitoyl-[acyl-carrier protein] hydrolase activity","type":"exact"}],"termid":"GO:0016296"}


id: MONDO:0004765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An asthma that is triggered by factors not related to allergies such as anxiety, stress, exercise, cold air, dry air, hyperventilation, smoke, viruses, chemical irritants, autonomic imbalance, hormonal deficiencies and psychogenic influences. It is characterized by airway obstruction and inflammation that is at least partially reversible with medication. The symptoms include coughing, wheezing, shortness of breath or rapid breathing, and chest tightness.","definition_xrefs":["DOID:9360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asthma","termid":"MONDO:0004979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intrinsic asthma","secondary_identifiers":["SCTID:266361008","MEDGEN:510123","ICD9:493.1","UMLS:C0155880"],"termid":"MONDO:0004765","xrefs":{"Monarch":{"xref_id":"0004765"}}}


id: GO:0090617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in forming the mature 5' end of an mRNA molecule that derives from the mitochondrial genome.","definition_xrefs":["GOC:tb","PMID:25181358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial mRNA processing","termid":"GO:0090615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0140053","GO:0008150"],"is_obsolete":false,"name":"mitochondrial mRNA 5'-end processing","termid":"GO:0090617"}


id: GO:0007619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The behavior of an organism for the purpose of attracting sexual partners.","definition_xrefs":["GOC:dph","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating behavior","termid":"GO:0007617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"courtship behavior","synonyms":[{"name":"courtship behaviour","type":"exact"}],"termid":"GO:0007619"}


id: PBO:0063489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ and LIM domain 1","termid":"PBO:0063489"}


id: GO:0098890
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the postsynaptic membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:autophagy","GOC:mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of synaptic membrane","termid":"GO:0099243"},{"relation_name":"part_of","term_name":"postsynaptic membrane","termid":"GO:0045211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of postsynaptic membrane","termid":"GO:0098890"}


id: PBO:0028850
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_phenotype","termid":"PBO:0028850"}


id: PBO:0026999
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_mitotic_G1_phase","termid":"PBO:0026999"}


id: PBO:0046085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A1 pseudogene 10","termid":"PBO:0046085"}


id: PBO:0004549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H4 h4.3","termid":"PBO:0004549"}


id: GO:1905763
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a MTREC complex.","definition_xrefs":["GOC:TermGenie","PMID:26942678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"MTREC complex binding","synonyms":[{"name":"Mtl1-Red1 core complex binding","type":"exact"},{"name":"NURS complex binding","type":"exact"},{"name":"PAXT complex binding","type":"exact"}],"termid":"GO:1905763"}


id: PR:Q09831
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.05","synonyms":[{"name":"Spom972h-ppk14","type":"exact"}],"termid":"PR:Q09831"}


id: PBO:0003601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type I ribosomal protein arginine N-methyltransferase Rmt3","termid":"PBO:0003601"}


id: PBO:0091770
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"The Bioneer strain does not appear contain a deletion","termid":"PBO:0091770"}


id: PBO:0084280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein of the ER; forms an ER-membrane associated protein complex with Slp1p; identified along with SLP1 in a screen for mutants defective in the unfolded protein response (UPR); proposed to function in the folding of integral membrane proteins; interacts genetically with MPS3; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0084280"}


id: PBO:0064404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic lipase related protein 2 (gene/pseudogene)","termid":"PBO:0064404"}


id: MONDO:0013574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutis laxa - Marfanoid syndrome","secondary_identifiers":["MESH:C563639","OMIM:614100","Orphanet:171719","UMLS:C0432335","GARD:17069","icd11.foundation:467492754","SCTID:254221009","MEDGEN:96594"],"synonyms":[{"name":"cutis laxa - Marfanoid syndrome","type":"exact"},{"name":"cutis laxa, neonatal, with MARFANOID phenotype","type":"related"}],"termid":"MONDO:0013574","xrefs":{"Monarch":{"xref_id":"0013574"}}}


id: GO:0071740
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An IgD immunoglobulin complex that is present in the plasma membrane of B cells and is composed of two identical immunoglobulin heavy chains of the IgD isotype and two identical immunoglobulin light chains and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins.","definition_xrefs":["ISBN:0781765196","GOC:add","PMID:11282392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell receptor complex","termid":"GO:0019815"},{"relation_name":"is_a","term_name":"IgD immunoglobulin complex","termid":"GO:0071738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"IgD B cell receptor complex","synonyms":[{"name":"membrane-bound IgD","type":"exact"},{"name":"surface IgD","type":"exact"}],"termid":"GO:0071740"}


id: FYPO:0000006
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which any mitotic DNA damage checkpoint is abnormal. A mitotic DNA damage checkpoint normally regulates progression through the mitotic cell cycle in response to DNA damage. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal response to DNA damage stimulus during vegetative growth","termid":"FYPO:0000157"},{"relation_name":"is_a","term_name":"abnormal mitotic DNA integrity checkpoint","termid":"FYPO:0000643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000298"],"is_obsolete":false,"name":"abnormal mitotic DNA damage checkpoint","synonyms":[{"name":"abnormal DNA damage checkpoint during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic DNA damage checkpoint activation","type":"exact"},{"name":"abnormal mitotic DNA damage checkpoint during cellular response to DNA damage","type":"exact"},{"name":"abnormal mitotic DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"mitotic DNA damage checkpoint defects","type":"exact"}],"termid":"FYPO:0000006"}


id: GO:0030823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving cGMP.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cGMP metabolic process (obsolete GO:0030823)","synonyms":[{"name":"regulation of cGMP metabolism","type":"exact"}],"termid":"GO:0030823"}


id: MONDO:1011081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis, non-human animal","termid":"MONDO:1010267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, horse","secondary_identifiers":["OMIA:001033-9796"],"termid":"MONDO:1011081","xrefs":{"Monarch":{"xref_id":"1011081"}}}


id: PBO:0113341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function involved in regulating assembly of Gid4p into the GID E3 ligase complex; interacts with GID complex components; involved in actin patch formation; computationally predicted to be involved in fructose-1,6-bisphosphatase (Fbp1p) degradation; non-essential gene","termid":"PBO:0113341"}


id: PBO:0011170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PXA domain protein","termid":"PBO:0011170"}


id: PBO:0086962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of the Fps1p glycerol channel; under nonstress conditions, binds to Fps1p to positively regulate glycerol transport; under osmotic stress, multiple phosphorylation by Hog1p causes Ask10p to dissociate from Fps1p; forms homodimers and heterodimerizes with paralog Rgc1p; phosphorylated in response to oxidative stress; has a role in destruction of Ssn8p; associates with RNA polymerase II holoenzyme","termid":"PBO:0086962"}


id: PR:000050523
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the dam1 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit dam1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC589.08c","termid":"PR:000050523"}


id: PBO:0004793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT III complex subunit Vps20","termid":"PBO:0004793"}


id: FYPO:0007478
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a region of the genome that is normally stably assembled and maintained as heterochromatin over successive generations retains heterochromatic structure for fewer generations than normal.","definition_xrefs":["PMID:29899117","PMID:31278118","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal epigenetic heterochromatin inheritance","termid":"FYPO:0007477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0007477"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0007477","FYPO:0001985"],"is_obsolete":false,"name":"decreased epigenetic heterochromatin inheritance","synonyms":[{"name":"decreased PEV","type":"related"},{"name":"decreased epigenetic heterochromatin propagation","type":"exact"},{"name":"epigenetic inheritance of heterochromatin","type":"exact"},{"name":"reduced epigenetic heterochromatin inheritance","type":"exact"}],"termid":"FYPO:0007478"}


id: PBO:0052935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 21-3","termid":"PBO:0052935"}


id: MONDO:0009473
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isotretinoin-like syndrome is a phenocopy of the isotretinoin embryopathy.","definition_xrefs":["Orphanet:2306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isotretinoin-like syndrome","secondary_identifiers":["UMLS:C0432364","MEDGEN:96600","GARD:9675","OMIM:243440","SCTID:722006004","MESH:C535542"],"synonyms":[{"name":"ISOTRETINOIN embryopathy-like syndrome","type":"related"},{"name":"Isotretinoin embryopathy like syndrome","type":"related"},{"name":"Kawashima syndrome","type":"exact"},{"name":"microtia aortic arch syndrome","type":"related"},{"name":"microtia-aortic Arch syndrome","type":"related"},{"name":"microtia-aortic arch syndrome","type":"exact"},{"name":"syndrome of microtia and aortic arch anomalies","type":"related"}],"termid":"MONDO:0009473","xrefs":{"Monarch":{"xref_id":"0009473"}}}


id: GO:0038151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the C-C chemokine CCL2 to a C-C chemokine type 2 receptor (CCR2) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine (C-C motif) ligand 2 signaling pathway","termid":"GO:0038148"},{"relation_name":"is_a","term_name":"C-C chemokine receptor CCR2 signaling pathway","termid":"GO:0038150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"CCL2-activated CCR2 signaling pathway","synonyms":[{"name":"CCL2/CCR2 signaling pathway","type":"exact"}],"termid":"GO:0038151"}


id: PBO:0076420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 9 pseudogene 1","termid":"PBO:0076420"}


id: PBO:0060234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYB antisense RNA 1","termid":"PBO:0060234"}


id: MONDO:0010070
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive brachyolmia","termid":"MONDO:0018662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0006025"],"is_obsolete":false,"name":"brachyolmia type 1, Hobaek type","secondary_identifiers":["UMLS:C1849055","GARD:995","OMIM:271530","Orphanet:93301","MESH:C537099","MEDGEN:338605","icd11.foundation:1213374086"],"synonyms":[{"name":"BCYM1A","type":"exact"},{"name":"brachyolmia type 1, Hobaek type","type":"exact"},{"name":"brachyolmia, recessive type of Hobaek","type":"related"},{"name":"spondylodysplasia with Pure brachyolmia","type":"related"}],"termid":"MONDO:0010070","xrefs":{"Monarch":{"xref_id":"0010070"}}}


id: GO:2000601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Arp2/3 complex-mediated actin nucleation.","definition_xrefs":["PMID:21454476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Arp2/3 complex-mediated actin nucleation","termid":"GO:0034315"},{"relation_name":"is_a","term_name":"positive regulation of actin nucleation","termid":"GO:0051127"},{"relation_name":"positively_regulates","term_name":"Arp2/3 complex-mediated actin nucleation","termid":"GO:0034314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"positive regulation of Arp2/3 complex-mediated actin nucleation","synonyms":[{"name":"positive regulation of actin filament branch nucleation","type":"exact"},{"name":"positive regulation of branched actin filament nucleation","type":"exact"}],"termid":"GO:2000601"}


id: GO:0009667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the inner membrane of a plastid.","definition_xrefs":["GOC:mah","GOC:dph","GOC:jl","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane organization","termid":"GO:0009668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"plastid inner membrane organization","synonyms":[{"name":"plastid inner membrane organisation","type":"exact"},{"name":"plastid inner membrane organization and biogenesis","type":"related"}],"termid":"GO:0009667"}


id: PBO:0003951
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of APC complex","termid":"PBO:0003951"}


id: PBO:0084166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Highly conserved subunit of mitochondrial pyruvate carrier (MPC); MPC is a mitochondrial inner membrane complex that mediates pyruvate uptake and comprises Mpc1p and Mpc2p during fermentative growth, or Mcp1p and Mpc3p during respiratory growth; null mutant displays slow growth that is complemented by expression of human or mouse ortholog; mutation in human ortholog MPC1 is associated with lactic acidosis and hyperpyruvatemia","termid":"PBO:0084166"}


id: GO:0102055
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3'-phosphonato-5'-adenylyl sulfate + a 12-hydroxyjasmonate = adenosine 3',5'-bismonophosphate + a 12-hydroxyjasmonate sulfate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 12-hydroxyjasmonate sulfotransferase activity (obsolete GO:0102055)","termid":"GO:0102055"}


id: GO:0072578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The receptor clustering process in which neurotransmitter-gated ion channels are localized to distinct domains in the cell membrane.","definition_xrefs":["PMID:20843816","GOC:dsf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor clustering","termid":"GO:0043113"},{"relation_name":"part_of","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"neurotransmitter-gated ion channel clustering","termid":"GO:0072578"}


id: GO:0019786
data:
  {"annotated_genes":["SJAG_01283"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91108],"is_not":false,"summary":null,"term":"GO:0019786"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: [protein]-C-terminal L-amino acid-glycyl-phosphatidylethanolamide + H2O = [protein]-C-terminal L-amino acid-glycine + a 1,2-diacyl-sn-glycero-3-phosphoethanolamine. An example of this reaction is the removal of ATG8 from membranes to which it is covalently linked to a phosphatidylethanolamid via its terminal glycine residue.","definition_xrefs":["PMID:22240591","PMID:2882172","PMID:22652539","PMID:28330855","PMID:28901328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"protein-phosphatidylethanolamide deconjugating activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"APG8-PE hydrolase","type":"related"},{"name":"APG8-specific protease activity","type":"narrow"},{"name":"ATG8-PE deconjugation activity","type":"narrow"},{"name":"ATG8-PE hydrolase activity","type":"narrow"},{"name":"Atg8-specific peptidase activity","type":"narrow"},{"name":"Atg8-specific protease activity","type":"exact"}],"termid":"GO:0019786","terms_by_termid":{"GO:0019786":null}}


id: PBO:0072577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRN3 homolog, RNA polymerase I transcription factor","termid":"PBO:0072577"}


id: GO:0043265
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Granule free cytoplasm, lying immediately below the plasma membrane.","definition_xrefs":["PMID:12211103","GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete ectoplasm (obsolete GO:0043265)","termid":"GO:0043265"}


id: PBO:0054030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1361","termid":"PBO:0054030"}


id: PBO:0074218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC44A3 antisense RNA 1","termid":"PBO:0074218"}


id: FYPO:0007396
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of heme into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","GO:0140420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased heme import","synonyms":[{"name":"decreased haem import","type":"exact"},{"name":"decreased heme import during mitotic cell cycle","type":"related"},{"name":"decreased heme import during vegetative growth","type":"exact"},{"name":"decreased heme import into cell","type":"exact"},{"name":"reduced heme import","type":"exact"}],"termid":"FYPO:0007396"}


id: GO:0085009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance released by the other (symbiont) organism via Maurer's cleft. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host mediated by symbiont secreted substance released from Maurer's cleft (obsolete GO:0085009)","synonyms":[{"name":"interaction with host mediated by symbiont secreted substance released from Maurers cleft","type":"exact"}],"termid":"GO:0085009"}


id: PBO:0001876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit Dad1","termid":"PBO:0001876"}


id: GO:0035371
data:
  {"annotated_genes":["SJAG_00140","SJAG_02624","SJAG_00113","SJAG_00030","SJAG_00723","SJAG_02695","SJAG_03540","SJAG_02761","SJAG_02045","SJAG_02040","SJAG_00851","SJAG_03052","SJAG_01196","SJAG_02336","SJAG_01613"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88062,90861,98713,104141,117635,118878],"is_not":false,"summary":null,"term":"GO:0035371"},{"annotations":[103244,97061,94683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903754"},{"annotations":[89094,103247,101819,96459,103382,99863,113531,118145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904511"}]},"cv_name":"cellular_component","definition":"The growing (plus) end of a microtubule. In vitro, microtubules polymerize more quickly at the plus end than at the minus end. In vivo, microtubule growth occurs only at the plus end, and the plus end switches between periods of growth and shortening, a behavior known as dynamic instability.","definition_xrefs":["GOC:bf","GOC:lb","PMID:16643273","PMID:12700769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule end","termid":"GO:1990752"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00113":null,"SJAG_00140":null,"SJAG_00723":null,"SJAG_00851":null,"SJAG_01196":null,"SJAG_01613":null,"SJAG_02040":null,"SJAG_02045":null,"SJAG_02336":null,"SJAG_02624":null,"SJAG_02695":null,"SJAG_02761":null,"SJAG_03052":null,"SJAG_03540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"microtubule plus-end","references_by_uniquename":{"GO_REF:0000107":null,"PMID:30726171":null},"synonyms":[{"name":"growing microtubule plus end","type":"exact"},{"name":"microtubule plus end","type":"exact"}],"termid":"GO:0035371","terms_by_termid":{"GO:0035371":null,"GO:1903754":null,"GO:1904511":null}}


id: PBO:0012851
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.4.1","termid":"PBO:0012851"}


id: PBO:0077044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid hormone receptor alpha","termid":"PBO:0077044"}


id: _global:genomically_related_to
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"holds between two entities when some genome-level process such as gene expression is involved. This includes transcriptional, spliceosomal events. These relations can be used between either macromolecule entities (such as regions of nucleic acid) or between their abstract informational counterparts.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genomically_related_to","secondary_identifiers":["RO:0002330"],"termid":"_global:genomically_related_to"}


id: PBO:0053397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 327","termid":"PBO:0053397"}


id: MONDO:0001119
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cessation of menstruation before the age of 40. Symptoms include hot flashes, night sweats, mood swings, and decreased sex drive.","definition_xrefs":["NCIT:C80099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ovarian failure","termid":"MONDO:0005387"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"premature menopause","secondary_identifiers":["UMLS:C0025322","MESH:D008594","SCTID:237788002","DOID:10787","ICD9:256.39","EFO:0009005","ICD9:256.31","MEDGEN:9963"],"synonyms":[{"name":"POF","type":"exact"},{"name":"early menopause","type":"exact"},{"name":"menopause - premature","type":"exact"},{"name":"menopause praecox","type":"exact"},{"name":"premature menopause","type":"exact"},{"name":"premature ovarian failure","type":"exact"}],"termid":"MONDO:0001119","xrefs":{"Monarch":{"xref_id":"0001119"}}}


id: GO:0003378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A sphingosine-1-phosphate signaling pathway that modulates the rate, frequency, or extent of the inflammatory response.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of inflammatory response by sphingosine-1-phosphate signaling pathway (obsolete GO:0003378)","synonyms":[{"name":"regulation of inflammatory response by sphingolipid signaling pathway","type":"broad"},{"name":"regulation of inflammatory response by sphingolipid signalling pathway","type":"broad"}],"termid":"GO:0003378"}


id: FYPO:0002771
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"},{"relation_name":"is_a","term_name":"abnormal protein localization to spindle pole body","termid":"FYPO:0002769"},{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"abnormal spindle pole body organization","termid":"FYPO:0003560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000054","FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to meiotic spindle pole body","synonyms":[{"name":"abnormal protein localisation to meiotic spindle pole body","type":"exact"},{"name":"abnormal protein localization to meiotic SPB","type":"exact"}],"termid":"FYPO:0002771"}


id: MONDO:0000115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic brain malformation characterized by displacement of the brain stem and cerebellum through the foramen magnum. It may result in hydrocephalus.","definition_xrefs":["NCIT:C84570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chiari malformation","secondary_identifiers":["SCTID:253184003","MESH:D001139","MEDGEN:2065","UMLS:C0003803"],"synonyms":[{"name":"(Arnold) Chiari malformation","type":"exact"},{"name":"Arnold-Chiari malformation","type":"exact"},{"name":"Chiari malformation","type":"exact"}],"termid":"MONDO:0000115","xrefs":{"Monarch":{"xref_id":"0000115"}}}


id: GO:0044046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance that is released by the other organism. This includes substances that are released via pathogen cell lysis.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via substance released outside of symbiont (obsolete GO:0044046)","synonyms":[{"name":"interaction with host via substance released outside of symbiont cells","type":"exact"}],"termid":"GO:0044046"}


id: FYPO:0001940
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ubiquinol-cytochrome-c reductase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal ubiquinol-cytochrome-c reductase activity","termid":"FYPO:0001939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000002","FYPO:0002114","FYPO:0005447","FYPO:0000707","FYPO:0000138","FYPO:0000652"],"is_obsolete":false,"name":"decreased ubiquinol-cytochrome-c reductase activity","synonyms":[{"name":"reduced ubiquinol-cytochrome-c reductase activity","type":"exact"}],"termid":"FYPO:0001940"}


id: MONDO:0003221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sclerosing hemangioma (obsolete MONDO:0003221)","termid":"MONDO:0003221","xrefs":{"Monarch":{"xref_id":"0003221"}}}


id: PBO:0058552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6131","termid":"PBO:0058552"}


id: GO:0002652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of tolerance induction dependent upon immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction","termid":"GO:0002643"},{"relation_name":"is_a","term_name":"regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002822"},{"relation_name":"regulates","term_name":"tolerance induction dependent upon immune response","termid":"GO:0002461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tolerance induction dependent upon immune response","synonyms":[{"name":"regulation of immune response-dependent tolerance induction","type":"exact"}],"termid":"GO:0002652"}


id: PR:O94696
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC83.12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C83.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.12","synonyms":[{"name":"Spom972h-SPBC83.12","type":"exact"}],"termid":"PR:O94696"}


id: MONDO:0020141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete infectious disease with dementia (obsolete MONDO:0020141)","secondary_identifiers":["Orphanet:98542"],"termid":"MONDO:0020141","xrefs":{"Monarch":{"xref_id":"0020141"}}}


id: GO:0075168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism modulates the frequency, rate or extent of its protein kinase-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of protein kinase-mediated signal transduction in response to host (obsolete GO:0075168)","synonyms":[{"name":"regulation of symbiont protein kinase-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075168"}


id: PBO:0026838
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_localization_to_mitotic_spindle_pole_body_during_anaphase","termid":"PBO:0026838"}


id: FYPO:0006564
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cells show increased sensitivity to ethanol when the cell population is in stationary phase. Cells stop growing (and may die) at a concentration of ethanol that allows wild type cells to grow.","definition_xrefs":["PMID:9372444","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical in stationary phase","termid":"FYPO:0008000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to ethanol in stationary phase","synonyms":[{"name":"decreased cell population growth during cellular response to ethanol in stationary phase","type":"exact"},{"name":"decreased growth during cellular response to ethanol in stationary phase","type":"exact"},{"name":"hypersensitive to ethanol in stationary phase","type":"exact"},{"name":"sensitive to ethanol during stationary phase","type":"exact"},{"name":"sensitive to ethyl alcohol in stationary phase","type":"exact"}],"termid":"FYPO:0006564"}


id: PBO:0056364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 6 pseudogene 1","termid":"PBO:0056364"}


id: GO:0039673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the dendritic cell mediated immune response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:bf","UniProtKB-KW:KW-1118","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host innate immune response","termid":"GO:0052167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host dendritic cell mediated immune response","secondary_identifiers":["VZ:869"],"synonyms":[{"name":"evasion by virus of host dendritic cell activity","type":"related"},{"name":"evasion by virus of host dendritic cell response","type":"exact"},{"name":"impairing dendritic cell function by virus","type":"exact"},{"name":"modulation of host dendritic cell activity by virus","type":"broad"}],"termid":"GO:0039673"}


id: MONDO:0009723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A progressive neurological disease defined by specific neuropathological features associating brainstem and basal ganglia lesions.","definition_xrefs":["Orphanet:506"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"excluded_subClassOf","term_name":"supranuclear oculomotor palsy","termid":"MONDO:0020257"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005244","MONDO:0005066"],"is_obsolete":false,"name":"Leigh syndrome","secondary_identifiers":["MedDRA:10062950","NANDO:2200527","DOID:3652","MESH:D007888","ICD9:330.8","NANDO:1200175","icd11.foundation:672871576","MEDGEN:44095","NCIT:C84814","NORD:1355","UMLS:C0023264","GARD:6877","OMIM:256000","SCTID:29570005"],"synonyms":[{"name":"LS","type":"exact"},{"name":"LSS","type":"exact"},{"name":"Leigh disease","type":"exact"},{"name":"Leigh syndrome","type":"exact"},{"name":"Leigh syndrome due to mitochondrial Complex 1 deficiency","type":"related"},{"name":"Leigh syndrome due to mitochondrial Complex 2 deficiency","type":"related"},{"name":"Leigh syndrome due to mitochondrial Complex 3 deficiency","type":"related"},{"name":"Leigh syndrome due to mitochondrial Complex 4 deficiency","type":"related"},{"name":"Leigh syndrome due to mitochondrial Complex 5 deficiency","type":"related"},{"name":"Leigh syndrome spectrum","type":"exact"},{"name":"Leigh's disease","type":"exact"},{"name":"Leigh's necrotizing encephalopathy","type":"related"},{"name":"SNE","type":"related"},{"name":"infantile necrotizing encephalomyelopathy","type":"exact"},{"name":"infantile subacute necrotizing encephalopathy","type":"exact"},{"name":"juvenile subacute necrotizing encephalomyelopathy","type":"exact"},{"name":"necrotizing encephalopathy, infantile Subacute, of Leigh","type":"related"},{"name":"subacute necrotizing encephalomyelopathy","type":"related"},{"name":"subacute necrotizing encephalopathy","type":"related"}],"termid":"MONDO:0009723","xrefs":{"Monarch":{"xref_id":"0009723"}}}


id: MOD:00601
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively produces an heterocyclic amino acid with a covalent bond between the side chain and either its alpha amino or 1-carboxyl group, possibly breaking the peptide chain.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclized residue","synonyms":[{"name":"CycRes","type":"exact"}],"termid":"MOD:00601"}


id: PBO:0054395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1791","termid":"PBO:0054395"}


id: GO:0086046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which SA node cardiac muscle cell membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane depolarization during cardiac muscle cell action potential","termid":"GO:0086012"},{"relation_name":"part_of","term_name":"SA node cell action potential","termid":"GO:0086015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"membrane depolarization during SA node cell action potential","synonyms":[{"name":"membrane depolarization involved in regulation of SA node cardiac muscle cell action potential","type":"exact"},{"name":"membrane depolarization involved in regulation of SAN cardiac muscle cell action potential","type":"exact"},{"name":"membrane depolarization involved in regulation of sinoatrial node cardiac muscle cell action potential","type":"exact"},{"name":"membrane depolarization involved in regulation of sinus node cardiac muscle cell action potential","type":"narrow"}],"termid":"GO:0086046"}


id: PBO:0062578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily G member 2","termid":"PBO:0062578"}


