# terms

id: GO:0016466
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out). Found in archae.","definition_xrefs":["TC:3.A.2.3.1"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrogen-translocating A-type ATPase activity (obsolete GO:0016466)","synonyms":[{"name":"hydrogen-translocating A-type ATPase activity","type":"exact"},{"name":"proton-translocating A-type ATPase activity","type":"exact"}],"termid":"GO:0016466"}


id: PBO:0045983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"euchromatic histone lysine methyltransferase 1","termid":"PBO:0045983"}


id: PBO:0029759
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_DNA_5'-adenosine_monophosphate_hydrolase_activity","termid":"PBO:0029759"}


id: PBO:0086567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YOR015W is not an essential gene","termid":"PBO:0086567"}


id: PBO:0079936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream transcription factor 1 pseudogene 1","termid":"PBO:0079936"}


id: GO:0023060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is released and/or conveyed from one location to another.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission (obsolete GO:0023060)","synonyms":[{"name":"signal transmission","type":"exact"}],"termid":"GO:0023060"}


id: GO:0005872
data:
  {"annotated_genes":["SJAG_01613"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98714],"is_not":false,"summary":null,"term":"GO:0005872"}]},"cv_name":"cellular_component","definition":"Any complex that includes a dimer of molecules from the kinesin superfamily and any associated proteins, and moves towards the minus end of a microtubule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinesin complex","termid":"GO:0005871"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630","GO:0032991"],"is_obsolete":false,"name":"minus-end kinesin complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005872","terms_by_termid":{"GO:0005872":null}}


id: PBO:0016564
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Barrats oesophagus","termid":"PBO:0016564"}


id: PBO:0065608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTP4A1 pseudogene 2","termid":"PBO:0065608"}


id: PBO:0044269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine ligand 9","termid":"PBO:0044269"}


id: MONDO:0016240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemimelia is a limb malformation characterized by the absence or gross shortening of the lower portion of one or more of the limbs. The condition is designated according to which bone of the distal arm or leg is absent or defective and includes fibular, radial, tibial, or ulnar hemimelia. Hemimelia ranges in severity.","definition_xrefs":["Orphanet:2130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"hemimelia","secondary_identifiers":["MEDGEN:9194","GARD:18761","SCTID:33076008","NCIT:C34674","MedDRA:10019464","UMLS:C0018987"],"synonyms":[{"name":"longitudinal meromelia","type":"exact"}],"termid":"MONDO:0016240","xrefs":{"Monarch":{"xref_id":"0016240"}}}


id: MONDO:1012928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alzheimer disease that occurs in Rhesus monkey due to a mutation in the APP gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"Alzheimer disease, non-human animal","termid":"MONDO:1011443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alzheimer disease, APP-related, Rhesus monkey","secondary_identifiers":["OMIA:002538-9544"],"termid":"MONDO:1012928","xrefs":{"Monarch":{"xref_id":"1012928"}}}


id: PBO:0079429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin delta 1","termid":"PBO:0079429"}


id: PBO:0081701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF622 pseudogene 1","termid":"PBO:0081701"}


id: PBO:0052548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell lectin like receptor C1","termid":"PBO:0052548"}


id: GO:0018097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The synthesis of the chromophore S-4-hydroxycinnamyl-L-cysteine.","definition_xrefs":["RESID:AA0207"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-chromophore linkage via peptidyl-S-4-hydroxycinnamyl-L-cysteine (obsolete GO:0018097)","synonyms":[{"name":"protein amino acid cinnamylation","type":"broad"}],"termid":"GO:0018097"}


id: GO:0008771
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + acetate + (citrate (pro-3S)-lyase) (thiol form) = AMP + diphosphate + (citrate (pro-3S)-lyase) (acetyl form).","definition_xrefs":["EC:6.2.1.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"[citrate (pro-3S)-lyase] ligase activity","secondary_identifiers":["RHEA:23788","MetaCyc:CITC-RXN","KEGG_REACTION:R04449"],"synonyms":[{"name":"acetate: SH-acyl-carrier-protein enzyme ligase (AMP)","type":"related"},{"name":"acetate:HS-citrate lyase ligase activity","type":"related"},{"name":"acetate:citrate-(pro-3S)-lyase(thiol-form) ligase (AMP-forming)","type":"broad"},{"name":"citrate (pro-3S)-lyase ligase activity","type":"related"},{"name":"citrate lyase ligase activity","type":"related"},{"name":"citrate lyase synthetase activity","type":"related"}],"termid":"GO:0008771"}


id: PBO:0084617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Metallothionein; binds copper and mediates resistance to high concentrations of copper and cadmium; locus is variably amplified in different strains, with two copies, CUP1-1 and CUP1-2, in the genomic sequence reference strain S288C; CUP1-1 has a paralog, CUP1-2, that arose from a segmental duplication","termid":"PBO:0084617"}


id: GO:0018649
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: tetrahydrofuran + O2 + 2 H+ + 2 e- = H2O + 2-hydroxytetrahydrofuran.","definition_xrefs":["UM-BBD_reactionID:r0017"],"gene_count":0,"genotype_count":0,"name":"obsolete tetrahydrofuran hydroxylase activity (obsolete GO:0018649)","termid":"GO:0018649"}


id: GO:0015612
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + L-arabinose(out) = ADP + phosphate + L-arabinose(in).","definition_xrefs":["RHEA:30007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-arabinose transmembrane transporter activity","termid":"GO:0015147"},{"relation_name":"is_a","term_name":"ABC-type monosaccharide transporter activity","termid":"GO:0015407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ABC-type L-arabinose transporter activity","secondary_identifiers":["EC:7.5.2.12","MetaCyc:ABC-2-RXN"],"synonyms":[{"name":"L-arabinose porter activity","type":"exact"},{"name":"L-arabinose-importing ATPase activity","type":"narrow"}],"termid":"GO:0015612"}


id: GO:0047618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(4)-benzoylagmatine + H2O = agmatine + benzoate.","definition_xrefs":["RHEA:15065","EC:3.5.1.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"acylagmatine amidase activity","secondary_identifiers":["MetaCyc:ACYLAGMATINE-AMIDASE-RXN","KEGG_REACTION:R01425"],"synonyms":[{"name":"acylagmatine amidohydrolase activity","type":"related"},{"name":"acylagmatine deacylase activity","type":"related"},{"name":"benzoylagmatine amidohydrolase activity","type":"related"}],"termid":"GO:0047618"}


id: MONDO:0017003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"},{"relation_name":"is_a","term_name":"chromosome X disorder","termid":"MONDO:0700027"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of chromosome X","secondary_identifiers":["Orphanet:263726","MEDGEN:1826030","UMLS:C5679690","GARD:20911"],"synonyms":[{"name":"partial deletion of chromosome type X","type":"exact"},{"name":"partial monosomy of chromosome X","type":"exact"}],"termid":"MONDO:0017003","xrefs":{"Monarch":{"xref_id":"0017003"}}}


id: MONDO:0011944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic lupus erythematosus with nephritis, susceptibility to, 3","secondary_identifiers":["OMIM:607967","UMLS:C1842755","MEDGEN:335793"],"synonyms":[{"name":"SLEN3","type":"exact"},{"name":"systemic lupus erythematosus with nephritis, susceptibility to, 3","type":"exact"}],"termid":"MONDO:0011944","xrefs":{"Monarch":{"xref_id":"0011944"}}}


id: GO:0030269
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methyl-5,6,7,8-tetrahydromethanopterin + coenzyme M + 2 Na+(in) = 5,6,7,8-tetrahydromethanopterin + methyl-coenzyme M + 2 Na+(out). 2-(methylthio)ethanesulfonate is also known as methyl-CoM.","definition_xrefs":["RHEA:53492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methyltransferase activity","termid":"GO:0008172"},{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"5-methyl-5,6,7,8-tetrahydromethanopterin-dependent methyltransferase activity","termid":"GO:0042086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0022857","GO:0016741","GO:0005215"],"is_obsolete":false,"name":"tetrahydromethanopterin S-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04347","GO:0018709","EC:7.2.1.4","MetaCyc:2.1.1.86-RXN","UM-BBD_reactionID:r0355"],"synonyms":[{"name":"5-methyl-5,6,7,8-tetrahydromethanopterin:2-mercaptoethanesulfonate 2-methyltransferase activity","type":"related"},{"name":"N(5)-methyltetrahydromethanopterin--coenzyme M methyltransferase activity","type":"related"},{"name":"N5-methyltetrahydromethanopterin--coenzyme M methyltransferase activity","type":"related"},{"name":"tetrahydromethanopterin methyltransferase activity","type":"related"}],"termid":"GO:0030269"}


id: GO:0008265
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AH2 + L-cysteine + Mo-molybdopterin = A + H2O + L-alanine + thio-Mo-molybdopterin.","definition_xrefs":["PMID:11549764","RHEA:42636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016782","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"molybdenum cofactor sulfurtransferase activity","secondary_identifiers":["EC:2.8.1.9","Reactome:R-HSA-947499","MetaCyc:RXN-8351"],"synonyms":[{"name":"Mo-molybdopterin cofactor sulfurase activity","type":"exact"},{"name":"Mo-molybdopterin cofactor sulphurase activity","type":"exact"},{"name":"molybdopterin cofactor sulfurase activity","type":"exact"},{"name":"molybdopterin synthase sulfurylase activity","type":"exact"}],"termid":"GO:0008265"}


id: PBO:0059469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"musashi RNA binding protein 1","termid":"PBO:0059469"}


id: GO:0070404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the reduced form, NADH, of nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"NAD binding","termid":"GO:0051287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"NADH binding","synonyms":[{"name":"NAD (reduced) binding","type":"exact"},{"name":"reduced NAD binding","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide binding","type":"exact"}],"termid":"GO:0070404"}


id: PBO:0069449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 714, pseudogene","termid":"PBO:0069449"}


id: PBO:0030860
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_medial_cortex_in_spores","termid":"PBO:0030860"}


id: GO:1900047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hemostasis.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of hemostasis","termid":"GO:1900046"},{"relation_name":"negatively_regulates","term_name":"hemostasis","termid":"GO:0007599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hemostasis","synonyms":[{"name":"down regulation of hemostasis","type":"exact"},{"name":"down-regulation of hemostasis","type":"exact"},{"name":"downregulation of hemostasis","type":"exact"},{"name":"inhibition of hemostasis","type":"narrow"}],"termid":"GO:1900047"}


id: PBO:0049572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B histone pseudogene 9","termid":"PBO:0049572"}


id: MONDO:0003238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, benign, usually polypoid neoplasm that arises from the cervix. It is characterized by the presence of a glandular component and a smooth muscle cell component. Variants include the endocervical type, endometrial type, and atypical polypoid adenomyoma.","definition_xrefs":["NCIT:C40231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenomyoma","termid":"MONDO:0005635"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical adenomyoma","secondary_identifiers":["DOID:4995","MEDGEN:275705","UMLS:C1516404"],"synonyms":[{"name":"cervical adenomyoma","type":"exact"}],"termid":"MONDO:0003238","xrefs":{"Monarch":{"xref_id":"0003238"}}}


id: PBO:0053209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 8","termid":"PBO:0053209"}


id: MONDO:0017452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-syndromic brachydactyly that involves the pes.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic brachydactyly","termid":"MONDO:0017424"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-syndromic brachydactyly of toes","secondary_identifiers":["MEDGEN:609304","SCTID:205346006","UMLS:C0432029","Orphanet:294998","ICD9:755.66"],"synonyms":[{"name":"non-syndromic brachydactyly of pes","type":"exact"},{"name":"pes non-syndromic brachydactyly","type":"exact"},{"name":"short toes","type":"exact"}],"termid":"MONDO:0017452","xrefs":{"Monarch":{"xref_id":"0017452"}}}


id: PBO:0080169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 4","termid":"PBO:0080169"}


id: GO:0035797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to tellurite [TeO3(2-)]. Methylated derivatives of tellurite include Te(CH3)2 (dimethyltelluride) and Te2(CH3)2 (dimethylditelluride).","definition_xrefs":["PMID:11053398","GOC:bf","GOC:kad","PMID:21244361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"tellurite methyltransferase activity","synonyms":[{"name":"S-adenosyl-L-methionine-dependent tellurite methyltransferase activity","type":"exact"},{"name":"SAM-dependent tellurite methyltransferase activity","type":"exact"},{"name":"tellurite methylase activity","type":"broad"}],"termid":"GO:0035797"}


id: MONDO:0013549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylaspartate deficiency","secondary_identifiers":["MEDGEN:481346","UMLS:C3279716","OMIM:614063"],"synonyms":[{"name":"N-acetylaspartate deficiency","type":"exact"},{"name":"NACED","type":"related"},{"name":"hypoacetylaspartia","type":"related"},{"name":"naa deficiency","type":"related"}],"termid":"MONDO:0013549","xrefs":{"Monarch":{"xref_id":"0013549"}}}


id: PBO:0077920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 11","termid":"PBO:0077920"}


id: MONDO:0004181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon variant of breast adenosis characterized by the presence of irregularly shaped glands, epithelial cells with eosinophilic cytoplasm, and prominent myopepithelial cells. Mild atypia may be present.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast adenosis","termid":"MONDO:0003725"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast adenomyoepithelial adenosis","secondary_identifiers":["MEDGEN:267759","NCIT:C40391","DOID:7312","UMLS:C1511283"],"termid":"MONDO:0004181","xrefs":{"Monarch":{"xref_id":"0004181"}}}


id: GO:0160022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of a substance by a cell or a tissue by discharging a portion of the secreting cell when intracellular components are freed into a lumen through the shedding of whole pieces of the cytoplasm.","definition_xrefs":["PMID:25960390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"apocrine secretion","synonyms":[{"name":"secretion by cell decapitation","type":"related"},{"name":"secretion by membrane budding","type":"related"}],"termid":"GO:0160022"}


id: PBO:0036075
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K14_acetylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036075"}


id: GO:0031450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of slow-twitch skeletal muscle contraction.","definition_xrefs":["GOC:mtg_muscle","GOC:mah","GOC:tb","GOC:dph","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of slow-twitch skeletal muscle fiber contraction","termid":"GO:0031449"},{"relation_name":"is_a","term_name":"negative regulation of striated muscle contraction","termid":"GO:0045988"},{"relation_name":"negatively_regulates","term_name":"slow-twitch skeletal muscle fiber contraction","termid":"GO:0031444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of slow-twitch skeletal muscle fiber contraction","synonyms":[{"name":"down regulation of slow-twitch skeletal muscle contraction","type":"exact"},{"name":"down-regulation of slow-twitch skeletal muscle contraction","type":"exact"},{"name":"downregulation of slow-twitch skeletal muscle contraction","type":"exact"},{"name":"inhibition of slow-twitch skeletal muscle contraction","type":"narrow"},{"name":"negative regulation of slow-twitch skeletal muscle contraction","type":"exact"}],"termid":"GO:0031450"}


id: PBO:0066773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 71","termid":"PBO:0066773"}


id: MONDO:0033668
data:
  {"annotated_genes":["SJAG_03943"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85262],"is_not":false,"summary":null,"term":"MONDO:0033668"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03943":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"hearing loss, autosomal dominant 79","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619086","DOID:0112160","GARD:18157","MEDGEN:1735338","UMLS:C5436772"],"synonyms":[{"name":"DFNA79","type":"narrow"},{"name":"deafness, autosomal dominant 79","type":"narrow"}],"termid":"MONDO:0033668","terms_by_termid":{"MONDO:0033668":null},"xrefs":{"Monarch":{"xref_id":"0033668"}}}


id: PBO:0030277
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_processing_during_vegetative_growth","termid":"PBO:0030277"}


id: PBO:0108928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBL pseudogene 1","termid":"PBO:0108928"}


id: MONDO:1011262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-progressive vision impairment in dim or absent lighting in dogs due to a variation in the LRIT3 gene.","definition_xrefs":["PMID:35316139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"congenital blindness, non-human animal","termid":"MONDO:1011975"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital stationary night blindness, LRIT3-related, dog","secondary_identifiers":["OMIA:001486-9615"],"termid":"MONDO:1011262","xrefs":{"Monarch":{"xref_id":"1011262"}}}


id: PR:G2TRP1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC30B4.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRP1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C30B4.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.09","synonyms":[{"name":"Spom972h-SPBC30B4.09","type":"exact"}],"termid":"PR:G2TRP1"}


id: MONDO:0007948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Marfan syndrome","termid":"MONDO:0007947"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"marfanoid hypermobility syndrome","secondary_identifiers":["MESH:C531742","OMIM:154750","UMLS:C0268365","MEDGEN:120632"],"synonyms":[{"name":"marfanoid hypermobility syndrome","type":"exact"}],"termid":"MONDO:0007948","xrefs":{"Monarch":{"xref_id":"0007948"}}}


id: PBO:0067008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 15, pseudogene","termid":"PBO:0067008"}


id: PBO:0054512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1912","termid":"PBO:0054512"}


id: PBO:0089806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin-related substrate adaptor Any2","termid":"PBO:0089806"}


id: GO:0030073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of proinsulin from secretory granules accompanied by cleavage of proinsulin to form mature insulin. In vertebrates, insulin is secreted from B granules in the B cells of the vertebrate pancreas and from insulin-producing cells in insects.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"insulin secretion","termid":"GO:0030073"}


id: PBO:0090360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UbiE family methyltransferase","termid":"PBO:0090360"}


id: PBO:0003258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neddylation protein Dcn1 (predicted)","termid":"PBO:0003258"}


id: GO:0071889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a 14-3-3 protein. A 14-3-3 protein is any of a large family of approximately 30kDa acidic proteins which exist primarily as homo- and heterodimers within all eukaryotic cells, and have been implicated in the modulation of distinct biological processes by binding to specific phosphorylated sites on diverse target proteins, thereby forcing conformational changes or influencing interactions between their targets and other molecules. Each 14-3-3 protein sequence can be roughly divided into three sections: a divergent amino terminus, the conserved core region and a divergent carboxy-terminus. The conserved middle core region of the 14-3-3s encodes an amphipathic groove that forms the main functional domain, a cradle for interacting with client proteins.","definition_xrefs":["GOC:mah","PMID:19575580","GOC:cna","PMID:15167810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"14-3-3 protein binding","termid":"GO:0071889"}


id: PBO:0034430
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cell_cortex,_with_protein_mislocalized_to_cytoplasm,_during_vegetative_growth","termid":"PBO:0034430"}


id: MONDO:0007176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Helicoid peripapillary chorioretinal degeneration is a rare autosomal dominantly inherited chorioretinal degeneration disease, presenting at birth or infancy, characterized by progressive bilateral retinal and choroidal atrophy, appearing as lesions on the optic nerve and peripheral ocular fundus and leading to central vision loss. Congenital anterior polar cataracts are sometimes associated with this disease.","definition_xrefs":["Orphanet:86813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"helicoid peripapillary chorioretinal degeneration","secondary_identifiers":["MEDGEN:354733","icd11.foundation:896652469","MESH:C566236","OMIM:108985","DOID:0111228","GARD:16757","SCTID:724384008","UMLS:C1862382"],"synonyms":[{"name":"SCRA","type":"exact"},{"name":"SVEINSSON chorioretinal atrophy","type":"related"},{"name":"Sveinsson chorioretinal atrophy","type":"exact"},{"name":"atrophia areata","type":"exact"},{"name":"helicoidal peripapillary chorioretinal Degeneration","type":"related"},{"name":"peripapillary chorioretinal Degeneration, Icelandic type","type":"related"}],"termid":"MONDO:0007176","xrefs":{"Monarch":{"xref_id":"0007176"}}}


id: PBO:0085043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential INO80 chromatin remodeling complex subunit; deletion affects telomere maintenance via recombination","termid":"PBO:0085043"}


id: PBO:0036348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane transporter Mfs1","termid":"PBO:0036348"}


id: GO:0030283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: testosterone + NAD(P)+ = androst-4-ene-3,17-dione + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.51"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"testosterone dehydrogenase [NAD(P)+] activity","secondary_identifiers":["MetaCyc:1.1.1.51-RXN","Reactome:R-HSA-193064"],"synonyms":[{"name":"17beta-hydroxy steroid dehydrogenase","type":"broad"},{"name":"3(or 17)beta-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"3(or 17)beta-hydroxysteroid:NAD(P)+ oxidoreductase","type":"broad"},{"name":"3beta-hydroxy steroid dehydrogenase","type":"broad"},{"name":"3beta-hydroxysteroid dehydrogenase","type":"broad"},{"name":"beta-hydroxy steroid dehydrogenase","type":"broad"}],"termid":"GO:0030283"}


id: PBO:0063695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein geranylgeranyltransferase type I subunit beta pseudogene 2","termid":"PBO:0063695"}


id: FYPO:0003472
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cut phenotype that is observed when a cell is subject to salt stress. In a cut phenotype, a cell undergoes septation despite abnormal chromosome segregation.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cut during cellular response to salt stress (obsolete FYPO:0003472)","synonyms":[{"name":"cut during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"cut during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"septation following abnormal mitotic chromosome segregation during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0003472"}


id: PBO:0045662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPY30 domain containing 2","termid":"PBO:0045662"}


id: MONDO:1012534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary surfactant metabolism dysfunction, non-human animal","termid":"MONDO:1011933"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary surfactant metabolism dysfunction, dog","secondary_identifiers":["OMIA:002251-9615"],"termid":"MONDO:1012534","xrefs":{"Monarch":{"xref_id":"1012534"}}}


id: MONDO:0020019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete digestive tract malformation (obsolete MONDO:0020019)","secondary_identifiers":["Orphanet:98039"],"termid":"MONDO:0020019","xrefs":{"Monarch":{"xref_id":"0020019"}}}


id: GO:0090694
data:
  {"annotated_genes":["SJAG_00796","SJAG_00682"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89147,95725],"is_not":false,"summary":null,"term":"GO:0090694"}]},"cv_name":"cellular_component","definition":"A eukaryotically conserved heterodimeric protein complex (comprising adherin and the chromatid cohesion factor MAU2/Scc4/Ssl3) required for the loading of a cohesin, complex onto DNA.","definition_xrefs":["PMID:24291789","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SMC loading complex","termid":"GO:0032116"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00682":null,"SJAG_00796":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"Scc2-Scc4 cohesin loading complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Mis4-Ssl3 cohesin loading complex","type":"exact"}],"termid":"GO:0090694","terms_by_termid":{"GO:0090694":null}}


id: GO:0005049
data:
  {"annotated_genes":["SJAG_01358","SJAG_04366","SJAG_01534","SJAG_02661","SJAG_03693"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90567,95996,107960,113030,116760],"is_not":false,"summary":null,"term":"GO:0005049"}]},"cv_name":"molecular_function","definition":"Combining with a nuclear export signal (NES) on a cargo to be transported, to mediate transport of a the cargo through the nuclear pore, from the nuclear lumen to the cytoplasm. The cargo can be either a RNA or a protein.","definition_xrefs":["GOC:vw","GOC:bf","GOC:mah","PMID:11743003","GOC:pg","PMID:28713609","Wikipedia:Nuclear_transport","PMID:25802992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleocytoplasmic carrier activity","termid":"GO:0140142"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01358":null,"SJAG_01534":null,"SJAG_02661":null,"SJAG_03693":null,"SJAG_04366":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140142"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140104"}],"interesting_parent_ids":["GO:0140104","GO:0140142","GO:0003674"],"is_obsolete":false,"name":"nuclear export signal receptor activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0008262","Reactome:R-HSA-178215"],"synonyms":[{"name":"NES receptor","type":"exact"},{"name":"exportin activity","type":"related"},{"name":"importin-alpha binding","type":"related"},{"name":"importin-alpha export receptor activity","type":"narrow"}],"termid":"GO:0005049","terms_by_termid":{"GO:0005049":null}}


id: GO:0001634
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A G protein-coupled receptor that interacts with pituitary adenylate cyclase-activating polypeptide.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"pituitary adenylate cyclase-activating polypeptide receptor activity","secondary_identifiers":["GO:0016522"],"synonyms":[{"name":"PACAP receptor","type":"exact"},{"name":"pituitary adenylate cyclase activating polypeptide receptor","type":"exact"},{"name":"pituitary adenylate cyclase activating protein receptor activity","type":"exact"},{"name":"pituitary adenylate cyclase-activating peptide receptor activity","type":"related"},{"name":"pituitary adenylyl cyclase activating protein receptor activity","type":"exact"}],"termid":"GO:0001634"}


id: PBO:0026799
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_proteasome_core_complex_binding","termid":"PBO:0026799"}


id: GO:0030156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a peripheral benzodiazepine receptor (PBR).","definition_xrefs":["GOC:ceb","GOC:mah","PMID:9915832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"benzodiazepine receptor binding","synonyms":[{"name":"benzodiazepine receptor ligand","type":"narrow"},{"name":"diazepam binding inhibitor activity","type":"related"}],"termid":"GO:0030156"}


id: PBO:0042643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 18 pseudogene","termid":"PBO:0042643"}


id: GO:0018942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving organometals, any metal-containing organic compound, especially one in which the metal atom is linked directly to one of more carbon atoms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organometal metabolic process","synonyms":[{"name":"organometal metabolism","type":"exact"}],"termid":"GO:0018942"}


id: SO:0000474
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A piece of sequence that makes up a tiling_path (SO:0000472).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly_component","termid":"SO:0000143"},{"relation_name":"part_of","term_name":"tiling_path","termid":"SO:0000472"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tiling_path_fragment","synonyms":[{"name":"tiling path fragment","type":"exact"}],"termid":"SO:0000474"}


id: MONDO:0010704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The mildest form of otopalatodigital syndrome spectrum disorder that is characterized by a generalized skeletal dysplasia, mild intellectual disability, conductive hearing loss, and typical facial anomalies.","definition_xrefs":["Orphanet:90650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"otopalatodigital syndrome","termid":"MONDO:0019027"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otopalatodigital syndrome type 1","secondary_identifiers":["OMIM:311300","SCTID:54036001","icd11.foundation:1442049882","NCIT:C118845","DOID:0111783","GARD:5121","MEDGEN:78542","ICD9:759.89","UMLS:C0265251"],"synonyms":[{"name":"OPD 1 syndrome","type":"exact"},{"name":"OPD I syndrome","type":"exact"},{"name":"OPD syndrome","type":"related"},{"name":"OPD syndrome 1","type":"exact"},{"name":"OPD1","type":"exact"},{"name":"Taybi syndrome","type":"exact"},{"name":"frontootopalatodigital osteodysplasia","type":"related"},{"name":"oto-palato-digital syndrome type 1","type":"exact"},{"name":"otopalatodigital spectrum disorder","type":"related"},{"name":"otopalatodigital syndrome, type 1","type":"exact"},{"name":"otopalatodigital syndrome, type I","type":"exact"},{"name":"otopalatodigital syndrome, type I, X-linked dominant","type":"exact"}],"termid":"MONDO:0010704","xrefs":{"Monarch":{"xref_id":"0010704"}}}


id: PBO:0083454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene DAL80","termid":"PBO:0083454"}


id: MONDO:0034127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune bullous skin disease","termid":"MONDO:0019337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"IgA pemphigus","secondary_identifiers":["GARD:22242","DOID:0080851","MEDGEN:697519","Orphanet:555905","UMLS:C1274167"],"termid":"MONDO:0034127","xrefs":{"Monarch":{"xref_id":"0034127"}}}


id: GO:0001542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process leading to the rupture of the follicle, releasing the centrally located oocyte into the oviduct. An example of this is found in Mus musculus.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"is_a","term_name":"ovulation","termid":"GO:0030728"},{"relation_name":"part_of","term_name":"female gonad development","termid":"GO:0008585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ovulation from ovarian follicle","termid":"GO:0001542"}


id: MONDO:0008534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin vascular disease","termid":"MONDO:0019293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"generalized essential telangiectasia","secondary_identifiers":["UMLS:C0406502","GARD:21087","icd11.foundation:236046211","OMIM:187260","MEDGEN:140803","Orphanet:280774","SCTID:238763007"],"synonyms":[{"name":"GET","type":"exact"},{"name":"Hbt","type":"related"},{"name":"telangiectasia, generalised essential","type":"related"},{"name":"telangiectasia, generalized essential","type":"related"},{"name":"telangiectasia, hereditary benign","type":"related"}],"termid":"MONDO:0008534","xrefs":{"Monarch":{"xref_id":"0008534"}}}


id: PBO:0085238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-prolyl cis/trans-isomerase; also activates the phosphotyrosyl phosphatase activity of protein phosphatase 2A (PP2A); regulates G1 phase progression, the osmoresponse, microtubule dynamics; subunit of the Tap42p-Pph21p-Rrd2p complex; protein abundance increases in response to DNA replication stress","termid":"PBO:0085238"}


id: PBO:0050730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 16","termid":"PBO:0050730"}


id: GO:0001916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T cell mediated cytotoxicity.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte mediated cytotoxicity","termid":"GO:0001912"},{"relation_name":"is_a","term_name":"regulation of T cell mediated cytotoxicity","termid":"GO:0001914"},{"relation_name":"is_a","term_name":"positive regulation of T cell mediated immunity","termid":"GO:0002711"},{"relation_name":"positively_regulates","term_name":"T cell mediated cytotoxicity","termid":"GO:0001913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell mediated cytotoxicity","synonyms":[{"name":"activation of T cell mediated cytotoxicity","type":"narrow"},{"name":"positive regulation of T cell mediated apoptosis","type":"exact"},{"name":"positive regulation of T cell mediated cell death","type":"exact"},{"name":"positive regulation of T cell mediated cell killing","type":"exact"},{"name":"positive regulation of T cell mediated cytolysis","type":"related"},{"name":"positive regulation of T lymphocyte mediated cytotoxicity","type":"exact"},{"name":"positive regulation of T-cell mediated apoptosis","type":"exact"},{"name":"positive regulation of T-cell mediated cell death","type":"exact"},{"name":"positive regulation of T-cell mediated cell killing","type":"exact"},{"name":"positive regulation of T-cell mediated cytolysis","type":"related"},{"name":"positive regulation of T-cell mediated cytotoxicity","type":"exact"},{"name":"positive regulation of T-lymphocyte mediated cytotoxicity","type":"exact"},{"name":"stimulation of T cell mediated cytotoxicity","type":"narrow"},{"name":"up regulation of T cell mediated cytotoxicity","type":"exact"},{"name":"up-regulation of T cell mediated cytotoxicity","type":"exact"},{"name":"upregulation of T cell mediated cytotoxicity","type":"exact"}],"termid":"GO:0001916"}


id: GO:0016972
data:
  {"annotated_genes":["SJAG_02489","SJAG_03992","SJAG_00196","SJAG_02827","SJAG_01647"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97993,110322,114279],"is_not":false,"summary":null,"term":"GO:0016972"},{"annotations":[96626,102689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016971"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 R'C(R)SH + O2 = R'C(R)S-S(R)CR' + 2 H2O2.","definition_xrefs":["RHEA:17357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disulfide oxidoreductase activity","termid":"GO:0015036"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor","termid":"GO:0016670"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_01647":null,"SJAG_02489":null,"SJAG_02827":null,"SJAG_03992":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0015036"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0015036","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"thiol oxidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:THIOL-OXIDASE-RXN","UM-BBD_reactionID:r1293","EC:1.8.3.2"],"synonyms":[{"name":"sulfhydryl oxidase activity","type":"related"},{"name":"thiol:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0016972","terms_by_termid":{"GO:0016971":null,"GO:0016972":null}}


id: GO:1903773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of viral budding via host ESCRT complex.","definition_xrefs":["GOC:als","PMID:24878737","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral budding via host ESCRT complex","termid":"GO:1903772"},{"relation_name":"is_a","term_name":"negative regulation of viral life cycle","termid":"GO:1903901"},{"relation_name":"negatively_regulates","term_name":"viral budding via host ESCRT complex","termid":"GO:0039702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of viral budding via host ESCRT complex","synonyms":[{"name":"down regulation of viral budding through the ESCRT machinery","type":"related"},{"name":"down regulation of viral budding via host ESCRT complex","type":"exact"},{"name":"down-regulation of viral budding through the ESCRT machinery","type":"related"},{"name":"down-regulation of viral budding via host ESCRT complex","type":"exact"},{"name":"downregulation of viral budding through the ESCRT machinery","type":"related"},{"name":"downregulation of viral budding via host ESCRT complex","type":"exact"},{"name":"inhibition of viral budding through the ESCRT machinery","type":"related"},{"name":"inhibition of viral budding via host ESCRT complex","type":"narrow"},{"name":"negative regulation of viral budding through the ESCRT machinery","type":"related"}],"termid":"GO:1903773"}


id: FYPO:0005107
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of mitotic DNA replication initiation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"},{"relation_name":"is_a","term_name":"normal regulation of DNA replication","termid":"FYPO:0002995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal regulation of mitotic DNA replication initiation","synonyms":[{"name":"normal regulation of DNA replication initiation during mitotic cell cycle","type":"exact"},{"name":"normal regulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"normal regulation of mitotic DNA replication initiation during vegetative growth","type":"exact"}],"termid":"FYPO:0005107"}


id: MONDO:0000281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Chapare hemorrhagic fever (obsolete MONDO:0000281)","termid":"MONDO:0000281","xrefs":{"Monarch":{"xref_id":"0000281"}}}


id: PBO:0017089
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae COX18","termid":"PBO:0017089"}


id: GO:0018125
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of peptidyl-cysteine to form peptidyl-S-methyl-L-cysteine.","definition_xrefs":["RESID:AA0234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methylation","termid":"GO:0006479"},{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-cysteine methylation","termid":"GO:0018125"}


id: GO:0032879
data:
  {"annotated_genes":["SJAG_01084","SJAG_02074","SJAG_03763","SJAG_03850","SJAG_02605","SJAG_03048","SJAG_03581","SJAG_04140","SJAG_03591","SJAG_04052","SJAG_04509","SJAG_03987","SJAG_04597","SJAG_00514","SJAG_04666","SJAG_02366","SJAG_00082","SJAG_04464","SJAG_03970","SJAG_02684","SJAG_04312","SJAG_00991","SJAG_04920","SJAG_01245","SJAG_02392","SJAG_03126","SJAG_05346","SJAG_00649","SJAG_00402","SJAG_04280","SJAG_04469","SJAG_03631","SJAG_02645","SJAG_04990","SJAG_00845","SJAG_01311","SJAG_01373","SJAG_00661","SJAG_01805","SJAG_04551","SJAG_02592","SJAG_03453","SJAG_04343","SJAG_03268","SJAG_02419","SJAG_00296","SJAG_00883","SJAG_04465","SJAG_01166","SJAG_03602","SJAG_01837","SJAG_05290"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902424"},{"annotations":[90701,112854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[94065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045806"},{"annotations":[87564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[87565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905533"},{"annotations":[101873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904537"},{"annotations":[105304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[90445,95340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903067"},{"annotations":[93894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[106724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902543"},{"annotations":[113967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900181"},{"annotations":[95341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903077"},{"annotations":[87566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905530"},{"annotations":[111452,104672,115506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902425"},{"annotations":[101647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"},{"annotations":[103200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045807"},{"annotations":[99672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045921"},{"annotations":[89404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035432"},{"annotations":[110030,92812,91226,98379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[92813,91227,98380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[92814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"},{"annotations":[89476,93288,116174,110693,101884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[93899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902854"},{"annotations":[93289,99937,101350,110501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[93857,101887,90331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"},{"annotations":[97931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120047"},{"annotations":[111160,118355,110510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000369"},{"annotations":[87373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001135"},{"annotations":[102433,90446,112729,89348,112857,91908,77777,92189,77067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030100"},{"annotations":[111139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060628"},{"annotations":[87376,93329,97899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017157"},{"annotations":[91503,87377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033157"},{"annotations":[98895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000185"},{"annotations":[105881],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902267"},{"annotations":[107444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905391"},{"annotations":[102825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905634"},{"annotations":[113118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000156"},{"annotations":[91504,87378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060627"},{"annotations":[108155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of any process in which a cell, a substance, or a cellular entity is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological 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of localization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of localisation","type":"exact"}],"termid":"GO:0032879","terms_by_termid":{"GO:0017157":null,"GO:0030100":null,"GO:0033157":null,"GO:0035432":null,"GO:0042307":null,"GO:0042308":null,"GO:0042997":null,"GO:0045806":null,"GO:0045807":null,"GO:0045921":null,"GO:0046827":null,"GO:0060627":null,"GO:0060628":null,"GO:0061454":null,"GO:0120047":null,"GO:0140325":null,"GO:0140429":null,"GO:1900181":null,"GO:1902267":null,"GO:1902424":null,"GO:1902425":null,"GO:1902543":null,"GO:1902854":null,"GO:1903067":null,"GO:1903077":null,"GO:1904537":null,"GO:1905391":null,"GO:1905530":null,"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null,"GO:1905634":null,"GO:1905665":null,"GO:1905949":null,"GO:2000156":null,"GO:2000185":null,"GO:2000369":null,"GO:2001135":null}}


id: PBO:0065173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prokineticin receptor 1","termid":"PBO:0065173"}


id: PBO:0049399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gametocyte specific factor 1 like","termid":"PBO:0049399"}


id: MONDO:0002835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete papillary transitional carcinoma (obsolete MONDO:0002835)","termid":"MONDO:0002835","xrefs":{"Monarch":{"xref_id":"0002835"}}}


id: MONDO:0850459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary cutaneous T-cell non-Hodgkin lymphoma that is characterized by the clonal cutaneous proliferation of activated mature gamma-delta T cells with a cytotoxic phenotype.","definition_xrefs":["DOID:0081050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary cutaneous T-cell non-Hodgkin lymphoma","termid":"MONDO:0000607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093","MONDO:0005570"],"is_obsolete":false,"name":"primary cutaneous gamma-delta t-cell lymphoma","secondary_identifiers":["MEDGEN:313069","UMLS:C1707547"],"termid":"MONDO:0850459","xrefs":{"Monarch":{"xref_id":"0850459"}}}


id: MONDO:0020720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hypophosphatemic rickets","termid":"MONDO:0000044"},{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked hypophosphatemic rickets","secondary_identifiers":["MEDGEN:761927","MESH:D053098","NCIT:C123265","UMLS:C3540852","icd11.foundation:1169135980"],"synonyms":[{"name":"X-linked hypophosphatemic rickets","type":"exact"},{"name":"X-linked hypophosphatemic rickets (recessive or dominant)","type":"exact"}],"termid":"MONDO:0020720","xrefs":{"Monarch":{"xref_id":"0020720"}}}


id: MONDO:0859232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with central hypotonia and dysmorphic facies","secondary_identifiers":["UMLS:C5676944","MEDGEN:1807420","OMIM:619797"],"termid":"MONDO:0859232","xrefs":{"Monarch":{"xref_id":"0859232"}}}


id: MONDO:0008213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A developmental anomaly in which the lower sternum is posteriorly dislocated and concavely deformed, resulting in a funnel-shaped thorax.","definition_xrefs":["MESH:D005660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pectus excavatum","secondary_identifiers":["HP:0000767","OMIM:169300","icd11.foundation:9248522","SCTID:391987005","UMLS:C2051831","MEDGEN:781174","ICD9:754.81"],"synonyms":[{"name":"funnel chest","type":"related"},{"name":"pectus excavatum","type":"exact"},{"name":"pectus excavatum (disease)","type":"exact"}],"termid":"MONDO:0008213","xrefs":{"Monarch":{"xref_id":"0008213"}}}


id: GO:0005611
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha3, beta1 and gamma1 polypeptide chains.","definition_xrefs":["GOC:jl","PMID:10842354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"laminin-6 complex","synonyms":[{"name":"laminin-311 complex","type":"exact"},{"name":"laminin-6A complex","type":"exact"}],"termid":"GO:0005611"}


id: GO:0044306
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The specialized, terminal region of a neuron projection such as an axon or a dendrite.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"neuron projection terminus","synonyms":[{"name":"nerve terminal","type":"related"},{"name":"neuron projection terminal","type":"exact"},{"name":"neuron terminal specialization","type":"exact"}],"termid":"GO:0044306"}


id: PBO:0060922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromin 1 pseudogene 9","termid":"PBO:0060922"}


id: PBO:0048605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB10 interacting GYF protein 1","termid":"PBO:0048605"}


id: GO:1901130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of gentamycin.","definition_xrefs":["GOC:yaf","UniPathway:UPA00967","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside antibiotic biosynthetic process","termid":"GO:0030648"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"gentamycin metabolic process","termid":"GO:1901128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"gentamycin biosynthetic process","synonyms":[{"name":"gentamycin anabolism","type":"exact"},{"name":"gentamycin biosynthesis","type":"exact"},{"name":"gentamycin formation","type":"exact"},{"name":"gentamycin synthesis","type":"exact"}],"termid":"GO:1901130"}


id: PBO:0039859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 23 pseudogene 1","termid":"PBO:0039859"}


id: MONDO:0019498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An disease or disorder caused by infection with Tunga penetrans.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parasitic ectoparasitic infectious disease","termid":"MONDO:0002875"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"tungiasis","secondary_identifiers":["GARD:393","DOID:0050266","MESH:D058285","icd11.foundation:2076748409","ICD9:134.1","Orphanet:879","MEDGEN:78823","SCTID:64612002","EFO:1001445","UMLS:C0277356"],"synonyms":[{"name":"S penetrans","type":"related"},{"name":"Sarcopsylla penetrans","type":"related"},{"name":"T penetrans","type":"related"},{"name":"Tunga penetrans","type":"related"},{"name":"Tunga penetrans caused disease or disorder","type":"exact"},{"name":"Tunga penetrans disease or disorder","type":"exact"},{"name":"Tunga penetrans infectious disease","type":"exact"},{"name":"chigger flea","type":"related"}],"termid":"MONDO:0019498","xrefs":{"Monarch":{"xref_id":"0019498"}}}


id: MONDO:0006292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm of the pleura or peritoneum, arising from mesothelial cells. It is associated with exposure to asbestos.","definition_xrefs":["NCIT:C4456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"mesothelioma","termid":"MONDO:0005065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant mesothelioma","secondary_identifiers":["icd11.foundation:369414280","MEDGEN:91062","OMIM:156240","ICD9:199.1","Orphanet:50251","MESH:C562839","SCTID:109378008","UMLS:C0345967","DOID:1790","EFO:1000355","HP:0100001","GARD:7026","ICDO:9050/3","MedDRA:10027406"],"synonyms":[{"name":"MESOM","type":"related"},{"name":"advanced malignant mesothelioma","type":"narrow"},{"name":"asbestos-related malignant mesothelioma","type":"narrow"},{"name":"diffuse malignant mesothelioma","type":"narrow"},{"name":"malignant mesothelial neoplasm","type":"narrow"},{"name":"malignant mesothelial tumor","type":"exact"},{"name":"malignant mesothelial tumour","type":"exact"},{"name":"malignant mesothelioma","type":"exact"},{"name":"malignant mesothelioma (disease)","type":"exact"},{"name":"malignant neoplasm of mesothelium","type":"exact"},{"name":"malignant neoplasm of the mesothelium","type":"exact"},{"name":"malignant tumor of mesothelium","type":"exact"},{"name":"malignant tumor of the mesothelium","type":"exact"},{"name":"malignant tumour of mesothelium","type":"exact"},{"name":"malignant tumour of the mesothelium","type":"exact"},{"name":"mesothelioma, malignant","type":"exact"},{"name":"mesothelioma, somatic","type":"exact"}],"termid":"MONDO:0006292","xrefs":{"Monarch":{"xref_id":"0006292"}}}


id: PBO:0079032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon AAC) 1-5","termid":"PBO:0079032"}


id: FYPO:0006710
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to a pH above 7.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to alkaline pH","synonyms":[{"name":"decreased protein phosphorylation during cellular response to alkaline pH during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to alkaline pH during vegetative growth","type":"exact"},{"name":"decreased protein phosphorylation during cellular response to high pH","type":"exact"},{"name":"decreased protein phosphorylation in high pH","type":"related"},{"name":"reduced protein phosphorylation during cellular response to alkaline pH","type":"exact"}],"termid":"FYPO:0006710"}


id: PR:Q9URY6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sodium-coupled monocarboxylate transporter 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urea active transporter 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC869.03c","secondary_identifiers":["UniProtKB:Q9URY6"],"synonyms":[{"name":"Spom972h-SLC5A8","type":"exact"}],"termid":"PR:Q9URY6"}


id: GO:0009206
data:
  {"annotated_genes":["SJAG_00438","SJAG_02564","SJAG_01298","SJAG_03114","SJAG_05204","SJAG_04422","SJAG_04849","SJAG_01471","SJAG_00133","SJAG_07003","SJAG_02887","SJAG_MIT15","SJAG_03925","SJAG_04122","SJAG_MIT09","SJAG_00836","SJAG_00985","SJAG_02105","SJAG_00542","SJAG_00915","SJAG_MIT37","SJAG_02598"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99569,107758,101740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[66905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015986"},{"annotations":[115342,118557,107298,93351,101316,118563,118568,102535,92333,103153,104499,107391,94328,108276,103182,88606,92763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[117502],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905706"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of purine ribonucleoside triphosphate, a compound consisting of a purine base linked to a ribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside triphosphate biosynthetic process","termid":"GO:0009145"},{"relation_name":"is_a","term_name":"ribonucleoside triphosphate biosynthetic process","termid":"GO:0009201"},{"relation_name":"is_a","term_name":"purine ribonucleoside triphosphate metabolic process","termid":"GO:0009205"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01298":null,"SJAG_01471":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02887":null,"SJAG_03114":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04422":null,"SJAG_04849":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"purine ribonucleoside triphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"purine ribonucleoside triphosphate anabolism","type":"exact"},{"name":"purine ribonucleoside triphosphate biosynthesis","type":"exact"},{"name":"purine ribonucleoside triphosphate formation","type":"exact"},{"name":"purine ribonucleoside triphosphate synthesis","type":"exact"}],"termid":"GO:0009206","terms_by_termid":{"GO:0006183":null,"GO:0015986":null,"GO:0042776":null,"GO:1905706":null}}


id: PBO:0077464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 185A","termid":"PBO:0077464"}


id: MONDO:0000171
data:
  {"annotated_genes":["SJAG_01491","SJAG_04053","SJAG_04316","SJAG_03188"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85342,85341,85340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009364"},{"annotations":[85428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014140"},{"annotations":[86148,86147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013154"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"qualitative or quantitative defects of FKRP","termid":"MONDO:0016156"},{"relation_name":"excluded_subClassOf","term_name":"qualitative or quantitative defects of protein O-mannosyltransferase 1","termid":"MONDO:0016184"},{"relation_name":"excluded_subClassOf","term_name":"qualitative or quantitative defects of protein O-mannosyltransferase 2","termid":"MONDO:0016185"},{"relation_name":"excluded_subClassOf","term_name":"cobblestone lissencephaly","termid":"MONDO:0018869"},{"relation_name":"excluded_subClassOf","term_name":"congenital vitreoretinal dysplasia","termid":"MONDO:0020247"},{"relation_name":"excluded_subClassOf","term_name":"myopathy caused by variation in FKRP","termid":"MONDO:0700066"},{"relation_name":"excluded_subClassOf","term_name":"myopathy caused by variation in POMGNT1","termid":"MONDO:0700068"},{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy","termid":"MONDO:0018276"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01491":null,"SJAG_03188":null,"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy, type A","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:2599","DOID:0050560","MEDGEN:75553","Orphanet:899","UMLS:C0265221","SCTID:111504002","NCIT:C99109","MESH:D058494","OMIMPS:236670"],"synonyms":[{"name":"Chemke syndrome","type":"related"},{"name":"Pagon syndrome","type":"related"},{"name":"WWS","type":"exact"},{"name":"Walker-Warburg muscular dystrophy","type":"exact"},{"name":"Walker-Warburg syndrome","type":"exact"},{"name":"Warburg syndrome","type":"related"},{"name":"cerebroocular dysgenesis","type":"related"},{"name":"cerebroocular dysplasia muscular dystrophy syndrome","type":"related"},{"name":"cerebroocular dysplasia-muscular dystrophy syndrome","type":"exact"},{"name":"hard +/- E syndrome","type":"related"},{"name":"hard syndrome","type":"exact"},{"name":"hydrocephalus, agyria and retinal dysplasia","type":"related"},{"name":"hydrocephalus-agyria-retinal dysplasia syndrome","type":"exact"}],"termid":"MONDO:0000171","terms_by_termid":{"MONDO:0009364":null,"MONDO:0013154":null,"MONDO:0014140":null},"xrefs":{"Monarch":{"xref_id":"0000171"}}}


id: GO:1904121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Removes phosphatidylethanolamine from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle.","definition_xrefs":["GO_REF:0000066","GOC:TermGenie","PMID:8606365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transfer activity","termid":"GO:0120014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0120013"],"is_obsolete":false,"name":"phosphatidylethanolamine transfer activity","synonyms":[{"name":"intermembrane phosphatidylethanolamine transfer activity","type":"narrow"},{"name":"phosphatidylethanolamine carrier activity","type":"exact"},{"name":"phosphatidylethanolamine transporter activity","type":"broad"}],"termid":"GO:1904121"}


id: MONDO:0014761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary pediatric Behçet-like disease (obsolete MONDO:0014761)","termid":"MONDO:0014761","xrefs":{"Monarch":{"xref_id":"0014761"}}}


id: PR:Q9UT34
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC824.09c gene.","definition_xrefs":["UniProtKB:Q9UT34","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C824.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC824.09c","synonyms":[{"name":"Spom972h-SPAC824.09c","type":"exact"}],"termid":"PR:Q9UT34"}


id: PBO:0030176
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_aseptate_cell","termid":"PBO:0030176"}


id: GO:0031844
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 4 neuropeptide Y receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide Y receptor binding","termid":"GO:0031841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type 4 neuropeptide Y receptor binding","synonyms":[{"name":"pancreatic polypeptide receptor binding","type":"exact"},{"name":"type 4 neuropeptide Y receptor ligand","type":"narrow"}],"termid":"GO:0031844"}


id: PBO:0087272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ser/Thr protein kinase involved in salt tolerance, nutrient response; functions in regulation of Trk1p-Trk2p potassium transporter; overexpression affects the Fe-S and lipoamide containing proteins in the mitochondrion; required for lipoylation of Lat1p, Kgd2p and Gcv3p; partially redundant with Hal5p; has similarity to Npr1p; localizes to the cytoplasm and mitochondrion","termid":"PBO:0087272"}


id: PBO:0044186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTP synthase 2","termid":"PBO:0044186"}


id: PBO:0062882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian adenocarcinoma amplified long non-coding RNA","termid":"PBO:0062882"}


id: GO:0006309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments.","definition_xrefs":["GOC:mah","GOC:mtg_apoptosis","GOC:dph","PMID:15723341","PMID:23379520","GOC:tb","ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA catabolic process","termid":"GO:0006308"},{"relation_name":"part_of","term_name":"apoptotic nuclear changes","termid":"GO:0030262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"apoptotic DNA fragmentation","secondary_identifiers":["GO:0008178","Reactome:R-HSA-140342"],"synonyms":[{"name":"DNA catabolic process during apoptosis","type":"exact"},{"name":"DNA catabolism during apoptosis","type":"exact"},{"name":"DNA fragmentation","type":"broad"},{"name":"DNA fragmentation involved in apoptotic nuclear change","type":"exact"},{"name":"chromatinolysis","type":"broad"},{"name":"endonucleolytic DNA catabolic process involved in apoptosis","type":"exact"}],"termid":"GO:0006309"}


id: MONDO:0009775
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Oguchi disease in which the cause of the disease is a mutation in the SAG gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete hereditary night blindness (obsolete MONDO:0004587)","termid":"MONDO:0004587"},{"relation_name":"is_a","term_name":"Oguchi disease","termid":"MONDO:0019152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Oguchi disease-1","secondary_identifiers":["MEDGEN:1645330","DOID:0110712","OMIM:258100","UMLS:C4551824"],"synonyms":[{"name":"CSNBO1","type":"exact"},{"name":"Oguchi disease 1","type":"related"},{"name":"Oguchi disease caused by mutation in SAG","type":"exact"},{"name":"Oguchi disease type 1","type":"exact"},{"name":"SAG Oguchi disease","type":"exact"},{"name":"congenital stationary night blindness Oguchi type 1","type":"exact"},{"name":"night blindness, congenital stationary, Oguchi type 1","type":"related"}],"termid":"MONDO:0009775","xrefs":{"Monarch":{"xref_id":"0009775"}}}


id: PBO:0073948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 20 member 1 pseudogene 1","termid":"PBO:0073948"}


id: MONDO:0014456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive severe congenital neutropenia","termid":"MONDO:0028226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive severe congenital neutropenia due to JAGN1 deficiency","secondary_identifiers":["Orphanet:423384","DOID:0112134","OMIM:616022","GARD:17702","UMLS:C4014954","MEDGEN:863391"],"synonyms":[{"name":"SCN6","type":"related"},{"name":"neutropenia, severe congenital, 6, autosomal recessive","type":"related"}],"termid":"MONDO:0014456","xrefs":{"Monarch":{"xref_id":"0014456"}}}


id: PBO:0036059
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_at_telomere_during_vegetative_growth","termid":"PBO:0036059"}


id: PBO:0066492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 4A pseudogene 3","termid":"PBO:0066492"}


id: PBO:0074709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 74A","termid":"PBO:0074709"}


id: MONDO:1011188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scoliosis that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scoliosis, non-human animal","termid":"MONDO:1010302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scoliosis, horse","secondary_identifiers":["OMIA:000891-9796"],"termid":"MONDO:1011188","xrefs":{"Monarch":{"xref_id":"1011188"}}}


id: PBO:0038684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase short chain family member 3","termid":"PBO:0038684"}


id: PBO:0058461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5190","termid":"PBO:0058461"}


id: FYPO:0002740
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell proceeds normally through a specific mitotic cell cycle phase. A mitotic cell cycle phase is any of the distinct periods or stages into which the mitotic cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events.","definition_xrefs":["PomBase:mah","GO:0022403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle","termid":"FYPO:0000411"},{"relation_name":"is_a","term_name":"normal cell cycle phase","termid":"FYPO:0003833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal mitotic cell cycle phase","termid":"FYPO:0002740"}


id: MONDO:0001865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autoimmune polyendocrinopathy syndrome (obsolete MONDO:0001865)","termid":"MONDO:0001865","xrefs":{"Monarch":{"xref_id":"0001865"}}}


id: GO:0008225
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Inhibits the growth of, or directly kills, Gram-negative bacterial cells.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete Gram-negative antibacterial peptide activity (obsolete GO:0008225)","synonyms":[{"name":"Gram-negative antibacterial peptide activity","type":"exact"}],"termid":"GO:0008225"}


id: PBO:0068964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 208, pseudogene","termid":"PBO:0068964"}


id: MONDO:0007764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sclerozing bone disorder characterized by generalized skeletal densification, particularly of the cranial vault and tubular long bones, which is not associated to an increased risk of fracture.","definition_xrefs":["Orphanet:2790"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"hyperostosis","termid":"MONDO:0002185"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal dominant osteosclerosis, Worth type","secondary_identifiers":["icd11.foundation:1038854228","UMLS:C0432273","DOID:0080037","OMIM:607636","MEDGEN:140932","GARD:390","OMIM:144750","SCTID:254131007"],"synonyms":[{"name":"Ostéosclérose autosomique dominante type Worth","type":"exact"},{"name":"VBCH2","type":"related"},{"name":"Van Buchem disease type 2","type":"related"},{"name":"Van Buchem disease, type 2","type":"related"},{"name":"Worth syndrome","type":"exact"},{"name":"Worth's syndrome","type":"exact"},{"name":"autosomal dominant endosteal hyperostosis","type":"exact"},{"name":"autosomal dominant osteosclerosis","type":"exact"},{"name":"benign form of Worth hyperostosis corticalis generalisata with torus platinus","type":"exact"},{"name":"endosteal hyperostosis, Worth type","type":"exact"},{"name":"endosteal hyperostosis, autosomal dominant","type":"related"},{"name":"hyperostosis corticalis generalisata, benign form of Worth with torus palatinus","type":"related"},{"name":"hyperostosis corticalis generalisata, benign form of Worth, with torus palatinus","type":"related"},{"name":"hyperostosis, endosteal","type":"exact"},{"name":"osteosclerosis of the skull and enlarged mandible","type":"related"},{"name":"osteosclerosis, autosomal dominant","type":"related"},{"name":"osteosclerosis, autosomal dominant, Worth type","type":"related"}],"termid":"MONDO:0007764","xrefs":{"Monarch":{"xref_id":"0007764"}}}


id: PBO:0090590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall alpha-amylase homolog Aah3","termid":"PBO:0090590"}


id: MONDO:0009674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy, adult-onset, with leukoencephalopathy","secondary_identifiers":["MEDGEN:340269","MESH:C565361","OMIM:253590","UMLS:C1854646"],"synonyms":[{"name":"muscular dystrophy, adult-onset, with leukoencephalopathy","type":"exact"}],"termid":"MONDO:0009674","xrefs":{"Monarch":{"xref_id":"0009674"}}}


id: PBO:0081008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB44 divergent transcript","termid":"PBO:0081008"}


id: GO:0016785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a selenium-containing group from one compound (donor) to another (acceptor).","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity","termid":"GO:0016740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"selenotransferase activity","secondary_identifiers":["GO:0016786","EC:2.9.1.-"],"synonyms":[{"name":"transferase activity, transferring selenium-containing groups","type":"exact"}],"termid":"GO:0016785"}


id: MONDO:0014299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"schwannomatosis","termid":"MONDO:0008075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0000426"],"is_obsolete":false,"name":"LZTR1-related schwannomatosis","secondary_identifiers":["UMLS:C3810283","MEDGEN:816613","OMIM:615670","GARD:16000","DOID:0070481"],"synonyms":[{"name":"SWNTS2","type":"related"},{"name":"Schwannomatosis type 2","type":"exact"},{"name":"schwannomatosis 2","type":"exact"},{"name":"schwannomatosis-2, susceptibility to","type":"related"}],"termid":"MONDO:0014299","xrefs":{"Monarch":{"xref_id":"0014299"}}}


id: MONDO:0003007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A renal cell carcinoma that occurs during childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal cell adenocarcinoma","termid":"MONDO:0005549"},{"relation_name":"is_a","term_name":"childhood malignant kidney neoplasm","termid":"MONDO:0036511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"childhood kidney cell carcinoma","secondary_identifiers":["UMLS:C1333001","DOID:4454","NCIT:C6568","MEDGEN:232070"],"synonyms":[{"name":"childhood kidney cell carcinoma","type":"exact"},{"name":"childhood renal cell carcinoma","type":"exact"},{"name":"childhood renal cell carcinoma (disease)","type":"exact"},{"name":"paediatric kidney cell carcinoma","type":"exact"},{"name":"paediatric renal cell carcinoma","type":"exact"},{"name":"paediatric renal cell carcinoma (disease)","type":"exact"},{"name":"pediatric kidney cell carcinoma","type":"exact"},{"name":"pediatric renal cell carcinoma","type":"exact"},{"name":"pediatric renal cell carcinoma (disease)","type":"exact"},{"name":"renal cell cancer","type":"broad"},{"name":"renal cell carcinoma (disease) of childhood","type":"exact"}],"termid":"MONDO:0003007","xrefs":{"Monarch":{"xref_id":"0003007"}}}


id: PBO:0071959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6","termid":"PBO:0071959"}


id: MONDO:0020787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypomagnesemia, seizures, and intellectual disability","termid":"MONDO:0014631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005240"],"is_obsolete":false,"name":"hypomagnesemia, seizures, and intellectual disability 1","secondary_identifiers":["UMLS:C4225333","MEDGEN:906582","OMIM:616418"],"synonyms":[{"name":"HOMGSMR1","type":"related"},{"name":"HYPOMAGNESEMIA, SEIZURES, AND MENTAL RETARDATION 1","type":"related"},{"name":"hypomagnesemia, seizures, and mental retardation","type":"broad"}],"termid":"MONDO:0020787","xrefs":{"Monarch":{"xref_id":"0020787"}}}


id: MOD:01321
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["PubMed:11510821","PubMed:12422359","PubMed:9448752","Unimod:176#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Michael addition of BHT quinone methide to cysteine and lysine","termid":"MOD:00534"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"Michael addition of BHT quinone methide to cysteine","synonyms":[{"name":"BHT","type":"related"},{"name":"Michael addition of BHT quinone methide to Cysteine and Lysine","type":"related"}],"termid":"MOD:01321"}


id: MONDO:1011342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Otorhinolaryngologic disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otorhinolaryngologic disease, non-human animal","termid":"MONDO:1011342","xrefs":{"Monarch":{"xref_id":"1011342"}}}


id: PBO:0089102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S15a","termid":"PBO:0089102"}


id: MONDO:0002931
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"conjunctival disorder","termid":"MONDO:0006170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"conjunctivochalasis","secondary_identifiers":["DOID:4250","MEDGEN:678824","ICD9:372.81","SCTID:408663001","UMLS:C0878693","icd11.foundation:870876723"],"termid":"MONDO:0002931","xrefs":{"Monarch":{"xref_id":"0002931"}}}


id: PBO:0042865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 97","termid":"PBO:0042865"}


id: PBO:0048703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucagon like peptide 2 receptor","termid":"PBO:0048703"}


id: GO:1900523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to amylopectin.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to amylopectin","termid":"GO:1900521"},{"relation_name":"positively_regulates","term_name":"response to amylopectin","termid":"GO:0044591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to amylopectin","synonyms":[{"name":"activation of response to amylopectin","type":"narrow"},{"name":"up regulation of response to amylopectin","type":"exact"},{"name":"up-regulation of response to amylopectin","type":"exact"},{"name":"upregulation of response to amylopectin","type":"exact"}],"termid":"GO:1900523"}


id: FYPO:0006330
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the attachment of an endoplasmic reticulum membrane to the plasma membrane via molecular tethers occurs to a lower extent than normal.","definition_xrefs":["GO:0061817","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased endoplasmic reticulum-plasma membrane tethering","synonyms":[{"name":"abnormal ER-PM contact formation","type":"related"},{"name":"decreased ER-PM tethering","type":"exact"},{"name":"decreased ER-plasma membrane tethering","type":"exact"},{"name":"decreased endoplasmic reticulum-plasma membrane tethering during mitotic cell cycle","type":"related"},{"name":"decreased endoplasmic reticulum-plasma membrane tethering during vegetative growth","type":"exact"},{"name":"increased ER-PM contact removal","type":"related"},{"name":"increased ER-PM uncoupling","type":"related"},{"name":"reduced endoplasmic reticulum-plasma membrane tethering","type":"exact"}],"termid":"FYPO:0006330"}


id: PBO:0111330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Mak16","termid":"PBO:0111330"}


id: PBO:0109608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A20","termid":"PBO:0109608"}


id: GO:1904305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of gastro-intestinal system smooth muscle contraction.","definition_xrefs":["PMID:10821044","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smooth muscle contraction","termid":"GO:0045986"},{"relation_name":"is_a","term_name":"regulation of gastro-intestinal system smooth muscle contraction","termid":"GO:1904304"},{"relation_name":"negatively_regulates","term_name":"gastro-intestinal system smooth muscle contraction","termid":"GO:0014831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of gastro-intestinal system smooth muscle contraction","synonyms":[{"name":"down regulation of gastro-intestinal system smooth muscle contraction","type":"exact"},{"name":"down-regulation of gastro-intestinal system smooth muscle contraction","type":"exact"},{"name":"downregulation of gastro-intestinal system smooth muscle contraction","type":"exact"},{"name":"inhibition of gastro-intestinal system smooth muscle contraction","type":"narrow"}],"termid":"GO:1904305"}


id: GO:1901574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of chemical substance.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete chemical substance biosynthetic process (obsolete GO:1901574)","synonyms":[{"name":"chemical substance anabolism","type":"exact"},{"name":"chemical substance biosynthesis","type":"exact"},{"name":"chemical substance biosynthetic process","type":"exact"},{"name":"chemical substance formation","type":"exact"},{"name":"chemical substance synthesis","type":"exact"}],"termid":"GO:1901574"}


id: PBO:0069953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1246, pseudogene","termid":"PBO:0069953"}


id: GO:0009314
data:
  {"annotated_genes":["SJAG_00272","SJAG_04791","SJAG_03898","SJAG_00729","SJAG_02828","SJAG_02860","SJAG_04150","SJAG_01648","SJAG_00863","SJAG_02199","SJAG_00814","SJAG_02818","SJAG_05242","SJAG_00208","SJAG_02200","SJAG_01262","SJAG_04190","SJAG_01010","SJAG_02334","SJAG_02182","SJAG_04877","SJAG_05197"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103491],"is_not":false,"summary":null,"term":"GO:0009314"},{"annotations":[65702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009785"},{"annotations":[119045,119046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071483"},{"annotations":[94719,104423,108597,102327],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904161"},{"annotations":[105434,89053,87487,112323,94542,93447,93145,111767,95505,103732,110313,96615,106473,94754,110913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070914"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation.","definition_xrefs":["Wikipedia:Electromagnetic_radiation","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00208":null,"SJAG_00272":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_01262":null,"SJAG_01648":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02200":null,"SJAG_02334":null,"SJAG_02818":null,"SJAG_02828":null,"SJAG_02860":null,"SJAG_03898":null,"SJAG_04150":null,"SJAG_04190":null,"SJAG_04791":null,"SJAG_04877":null,"SJAG_05197":null,"SJAG_05242":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to radiation","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:23873862":null},"synonyms":[{"name":"response to electromagnetic radiation stimulus","type":"exact"},{"name":"response to radiation stimulus","type":"exact"}],"termid":"GO:0009314","terms_by_termid":{"GO:0009314":null,"GO:0009785":null,"GO:0070914":null,"GO:0071483":null,"GO:1904161":null}}


id: PBO:0036214
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_methylation_during_vegetative_growth","termid":"PBO:0036214"}


id: PBO:0059914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 37","termid":"PBO:0059914"}


id: PBO:0077767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM22 pseudogene 3","termid":"PBO:0077767"}


id: MONDO:1011191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Synovial chondromatosis that occurs in great horned owl.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"synovial chondromatosis, non-human animal","termid":"MONDO:1010304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synovial chondromatosis, great horned owl","secondary_identifiers":["OMIA:001174-56268"],"termid":"MONDO:1011191","xrefs":{"Monarch":{"xref_id":"1011191"}}}


id: PBO:0056296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 1 light chain 3 alpha","termid":"PBO:0056296"}


id: GO:0019387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including methanol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methanol metabolic process","termid":"GO:0015945"},{"relation_name":"is_a","term_name":"methanogenesis","termid":"GO:0015948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006091"],"is_obsolete":false,"name":"methanogenesis, from methanol","secondary_identifiers":["MetaCyc:METHFORM-PWY"],"synonyms":[{"name":"methane biosynthesis from methanol","type":"exact"},{"name":"methane biosynthetic process from methanol","type":"exact"}],"termid":"GO:0019387"}


id: GO:0060869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of the target cell where the receptor possesses serine/threonine kinase activity, which contributes to the process of floral organ abscission.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:signaling","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete transmembrane receptor protein serine/threonine kinase signaling pathway involved in floral organ abscission (obsolete GO:0060869)","synonyms":[{"name":"transmembrane receptor protein serine/threonine kinase signalling pathway involved in floral organ abscission","type":"exact"}],"termid":"GO:0060869"}


id: PBO:0065719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prader Willi/Angelman region RNA 5","termid":"PBO:0065719"}


id: MONDO:0001943
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malaria resulting from infection by Plasmodium malariae.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malaria","termid":"MONDO:0005136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Plasmodium malariae malaria","secondary_identifiers":["NCIT:C34799","MEDGEN:44259","DOID:14324","ICD10CM:B52","ICD9:084.2","SCTID:27618009","UMLS:C0024536"],"synonyms":[{"name":"malaria by Plasmodium malariae","type":"exact"},{"name":"quartan malaria","type":"exact"}],"termid":"MONDO:0001943","xrefs":{"Monarch":{"xref_id":"0001943"}}}


id: GO:0099065
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the spine apparatus membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of spine apparatus membrane (obsolete GO:0099065)","termid":"GO:0099065"}


id: MONDO:0016528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Limb body wall complex (LBWC) is characterized by severe multiple congenital anomalies in the fetus with exencephaly/encephalocele, thoraco- and/or abdominoschisis (anterior body wall defects) and limb defects, with or without facial clefts.","definition_xrefs":["Orphanet:2369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"limb body wall complex","secondary_identifiers":["MEDGEN:906212","SCTID:716106000","GARD:3251","UMLS:C4274839","icd11.foundation:353005375"],"synonyms":[{"name":"Cyllosomas","type":"related"},{"name":"LBWC syndrome","type":"exact"},{"name":"aplasia of the cord","type":"related"},{"name":"body stalk anomaly","type":"related"},{"name":"limb-body wall complex","type":"related"},{"name":"short umbilical cord syndrome","type":"related"},{"name":"umbilical cord, short","type":"related"}],"termid":"MONDO:0016528","xrefs":{"Monarch":{"xref_id":"0016528"}}}


id: PBO:0001681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA family recombinase Rhp51","termid":"PBO:0001681"}


id: PBO:0056433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 6","termid":"PBO:0056433"}


id: GO:0035174
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of a phosphate group to a serine residue of a histone.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete histone serine kinase activity (obsolete GO:0035174)","synonyms":[{"name":"histone-serine kinase activity","type":"exact"}],"termid":"GO:0035174"}


id: PBO:0004461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream activation factor complex subunit Acr1","termid":"PBO:0004461"}


id: PBO:0047298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM, ARH/RhoGEF and pleckstrin domain protein 1","termid":"PBO:0047298"}


id: FYPO:0003366
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of pyridoxine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal pyridoxine import","termid":"FYPO:0003365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased pyridoxine import","synonyms":[{"name":"decreased pyridoxine import across plasma membrane","type":"exact"},{"name":"decreased pyridoxine import during mitotic cell cycle","type":"related"},{"name":"decreased pyridoxine import during vegetative growth","type":"exact"},{"name":"decreased pyridoxine import into cell","type":"exact"},{"name":"decreased pyridoxine uptake","type":"exact"},{"name":"reduced pyridoxine import","type":"exact"}],"termid":"FYPO:0003366"}


id: GO:0045814
data:
  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regulation of gene expression, epigenetic","references_by_uniquename":{"GO_REF:0000107":null,"PMID:35226668":null},"secondary_identifiers":["Reactome:R-HSA-212300","Reactome:R-HSA-5250941"],"synonyms":[{"name":"down regulation of gene expression, epigenetic","type":"exact"},{"name":"down-regulation of gene expression, epigenetic","type":"exact"},{"name":"downregulation of gene expression, epigenetic","type":"exact"},{"name":"gene silencing","type":"related"},{"name":"inhibition of gene expression, epigenetic","type":"narrow"}],"termid":"GO:0045814","terms_by_termid":{"GO:0000183":null,"GO:0010964":null,"GO:0030466":null,"GO:0031048":null,"GO:0031445":null,"GO:0031453":null,"GO:0031507":null,"GO:0031508":null,"GO:0031509":null,"GO:0033696":null,"GO:0045814":null,"GO:0060906":null,"GO:0061188":null,"GO:0090052":null,"GO:0090053":null,"GO:0090055":null,"GO:0140462":null,"GO:0140718":null,"GO:0140719":null,"GO:0140727":null,"GO:0141005":null,"GO:0141194":null,"GO:1902794":null,"GO:1902795":null,"GO:1902801":null}}


id: FYPO:0006474
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype observed in the vegetative growth phase of the life cycle in which regulation of translation in response to starvation for one or more amino acids is abnormal.","definition_xrefs":["PMID:29432178","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"translation regulation phenotype during vegetative growth","termid":"FYPO:0005044"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal regulation of translation in response to amino acid starvation","synonyms":[{"name":"abnormal regulation of translation during cellular response to amino acid starvation","type":"exact"},{"name":"abnormal regulation of translation in response to amino acid starvation during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of translation in response to amino acid starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0006474"}


id: PBO:0045105
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in malignant brain tumors 1 like 1 (pseudogene)","termid":"PBO:0045105"}


id: GO:0043001
data:
  {"annotated_genes":["SJAG_01114","SJAG_02231","SJAG_00916","SJAG_00330","SJAG_00858","SJAG_01516","SJAG_00144","SJAG_03838","SJAG_04609","SJAG_03970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90651,94631,98218,105903,106532,106638,108284,109076,112499],"is_not":false,"summary":null,"term":"GO:0043001"},{"annotations":[87564],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0042997"}]},"cv_name":"biological_process","definition":"The directed movement of proteins from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi to plasma membrane transport","termid":"GO:0006893"},{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"},{"relation_name":"is_a","term_name":"establishment of protein localization to plasma membrane","termid":"GO:0061951"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00144":null,"SJAG_00330":null,"SJAG_00858":null,"SJAG_00916":null,"SJAG_01114":null,"SJAG_01516":null,"SJAG_02231":null,"SJAG_03838":null,"SJAG_03970":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"Golgi to plasma membrane protein transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043001","terms_by_termid":{"GO:0042997":null,"GO:0043001":null}}


id: PBO:0051026
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor binding protein 6","termid":"PBO:0051026"}


id: MONDO:0021420
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic polypoid swelling of the vocal cord mucosa. It is usually unilateral and caused by excessive use of the voice.","definition_xrefs":["NCIT:C3440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal disorder","termid":"MONDO:0004382"},{"relation_name":"is_a","term_name":"polyp","termid":"MONDO:0005079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyp of vocal cord","secondary_identifiers":["MEDGEN:21887","EFO:0009478","UMLS:C0042929","icd11.foundation:1351291002","SCTID:9078005"],"synonyms":[{"name":"laryngeal vocal fold polyp","type":"exact"},{"name":"polyp of the vocal cord","type":"exact"},{"name":"vocal cord polyp","type":"exact"}],"termid":"MONDO:0021420","xrefs":{"Monarch":{"xref_id":"0021420"}}}


id: PBO:0086243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that may act as a chaperone for cytochrome c oxidase subunits; conserved protein; may act as a chaperone in the degradation of misfolded or unassembled cytochrome c oxidase subunits; localized to matrix face of the mitochondrial inner membrane; member of the AAA family but lacks a protease domain","termid":"PBO:0086243"}


id: PATO:0001916
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the rear and upper surface of an organism relative to another entity.","definition_xrefs":["PATOC:wd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"posterior to","termid":"PATO:0001633"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterodorsal to","termid":"PATO:0001916"}


id: PBO:0072406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 11","termid":"PBO:0072406"}


id: PR:O42998
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A HEAT repeat-containing protein 5B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02822","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pof6 interactor protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.08","secondary_identifiers":["UniProtKB:O42998"],"synonyms":[{"name":"Spom972h-HEATR5B","type":"exact"}],"termid":"PR:O42998"}


id: GO:0019254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving carnitine, where metabolism is linked to CoA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carnitine metabolic process","termid":"GO:0009437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carnitine metabolic process, CoA-linked","secondary_identifiers":["MetaCyc:CARNMET-PWY"],"synonyms":[{"name":"carnitine metabolism, CoA-linked","type":"exact"}],"termid":"GO:0019254"}


id: PBO:0059716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 24","termid":"PBO:0059716"}


id: GO:0071107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a parathyroid hormone stimulus.","definition_xrefs":["GOC:mah","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to parathyroid hormone","synonyms":[{"name":"response to parathyroid hormone stimulus","type":"exact"}],"termid":"GO:0071107"}


id: GO:0009115
data:
  {"annotated_genes":["SJAG_04297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116857],"is_not":false,"summary":null,"term":"GO:0009115"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of xanthine, 2,6-dihydroxypurine, a purine formed in the metabolic breakdown of guanine but not present in nucleic acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase catabolic process","termid":"GO:0006145"},{"relation_name":"is_a","term_name":"xanthine metabolic process","termid":"GO:0046110"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04297":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"xanthine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006151"],"synonyms":[{"name":"xanthine breakdown","type":"exact"},{"name":"xanthine catabolism","type":"exact"},{"name":"xanthine degradation","type":"exact"},{"name":"xanthine oxidation","type":"narrow"}],"termid":"GO:0009115","terms_by_termid":{"GO:0009115":null}}


id: GO:0033760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxymugineate + 2-oxoglutarate + O2 = CO2 + H+ + mugineate + succinate.","definition_xrefs":["EC:1.14.11.24","RHEA:12200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2'-deoxymugineic-acid 2'-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R07185","MetaCyc:1.14.11.24-RXN"],"synonyms":[{"name":"2'-deoxymugineic acid,2-oxoglutarate:oxygen oxidoreductase (2-hydroxylating) activity","type":"related"},{"name":"IDS3","type":"related"}],"termid":"GO:0033760"}


id: PBO:0026753
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_re-entry_into_mitotic_cell_cycle_after_arrest_in_response_to_hydroxyurea","termid":"PBO:0026753"}


id: GO:0038184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adenylate cyclase-activating G protein-coupled receptor signaling pathway initiated by a ligand binding to a bile acid receptor on the surface of the target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["PMID:36409000","PMID:19442546","PMID:12419312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"is_a","term_name":"adenylate cyclase-activating G protein-coupled receptor signaling pathway","termid":"GO:0007189"},{"relation_name":"is_a","term_name":"bile acid signaling pathway","termid":"GO:0038183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"adenylate cyclase-activating G protein-coupled bile acid receptor signaling pathway","synonyms":[{"name":"cell surface bile acid receptor signaling pathway","type":"broad"},{"name":"membrane bile acid receptor signaling pathway","type":"related"}],"termid":"GO:0038184"}


id: MONDO:0020268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ichthyosis associated with ocular features (obsolete MONDO:0020268)","secondary_identifiers":["Orphanet:98698"],"termid":"MONDO:0020268","xrefs":{"Monarch":{"xref_id":"0020268"}}}


id: GO:1903096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a meiotic spindle midzone.","definition_xrefs":["GOC:kmv","GO_REF:0000087","GOC:TermGenie","PMID:12707312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to meiotic spindle","termid":"GO:1905359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to meiotic spindle midzone","synonyms":[{"name":"protein localisation in meiotic spindle midzone","type":"exact"},{"name":"protein localisation to meiotic spindle midzone","type":"exact"},{"name":"protein localization in meiotic spindle midzone","type":"exact"}],"termid":"GO:1903096"}


id: PBO:0040745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain cytoplasmic RNA 1","termid":"PBO:0040745"}


id: GO:0007351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Subdivision of the embryo along the anterior/posterior axis into anterior, posterior and terminal regions.","definition_xrefs":["GOC:dph","ISBN:0879694238","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"blastoderm segmentation","termid":"GO:0007350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tripartite regional subdivision","termid":"GO:0007351"}


id: GO:0120235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of posttranslational protein translocation through the ER membrane.","definition_xrefs":["PMID:32513868","GOC:krc","GOC:rn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"regulates","term_name":"post-translational protein targeting to membrane, translocation","termid":"GO:0031204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of post-translational protein targeting to membrane, translocation","synonyms":[{"name":"regulation of N-terminal signal peptide-independent translocation into the ER","type":"narrow"},{"name":"regulation of SRP-independent endoplasmic reticulum protein-membrane targeting, translocation","type":"narrow"},{"name":"regulation of posttranslational endoplasmic reticulum membrane protein translocation","type":"exact"},{"name":"regulation of posttranslational protein targeting to membrane, translocation","type":"exact"}],"termid":"GO:0120235"}


id: PBO:0088063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-protein ligase subunit of the CCR4-NOT complex; with Ubc4p, ubiquitinates nascent polypeptide-associated complex subunits and histone demethyase Jhd2p; CCR4-NOT has roles in transcription regulation, mRNA degradation, and post-transcriptional modifications; regulates levels of DNA Polymerase-{alpha} to promote efficient and accurate DNA replication","termid":"PBO:0088063"}


id: MONDO:1011655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polled and multisystemic syndrome, non-human animal","secondary_identifiers":["OMIA:001736"],"termid":"MONDO:1011655","xrefs":{"Monarch":{"xref_id":"1011655"}}}


id: MONDO:0971092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate","termid":"MONDO:0016064"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"soft and hard cleft palate","secondary_identifiers":["Orphanet:664372"],"termid":"MONDO:0971092","xrefs":{"Monarch":{"xref_id":"0971092"}}}


id: SO:0000864
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence is representative of a class of similar sequences.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_attribute","termid":"SO:0000863"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exemplar","termid":"SO:0000864"}


id: GO:0033867
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + Fas-activated serine/threonine protein = ADP + Fas-activated serine/threonine phosphoprotein.","definition_xrefs":["EC:2.7.11.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0004672","GO:0016301","GO:0003674","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"Fas-activated serine/threonine kinase activity","secondary_identifiers":["MetaCyc:2.7.11.8-RXN"],"synonyms":[{"name":"ATP:Fas-activated serine/threonine protein phosphotransferase activity","type":"related"},{"name":"FAST","type":"related"},{"name":"FASTK","type":"related"},{"name":"STK10","type":"related"}],"termid":"GO:0033867"}


id: GO:0098716
data:
  {"annotated_genes":["SJAG_04830"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115495],"is_not":false,"summary":null,"term":"GO:0098716"}]},"cv_name":"biological_process","definition":"The directed movement of nickel cations from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nickel cation transmembrane transport","termid":"GO:0035444"},{"relation_name":"is_a","term_name":"inorganic cation import across plasma membrane","termid":"GO:0098659"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04830":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"nickel cation import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0090509"],"synonyms":[{"name":"nickel cation import into cell","type":"exact"}],"termid":"GO:0098716","terms_by_termid":{"GO:0098716":null}}


id: PBO:0058908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12126","termid":"PBO:0058908"}


id: BFO:0000067
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"[copied from inverse property 'occurs in'] b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contains_process","termid":"BFO:0000067"}


id: MONDO:0008060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nail dysplasia is an idiopathic nail dystrophy, beginning in early childhood, and characterized by excessive longitudinal striations and loss of nail luster affecting all 20 nails.","definition_xrefs":["Orphanet:79153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited isolated nail anomaly","termid":"MONDO:0019284"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nonsyndromic congenital nail disorder 1","secondary_identifiers":["DOID:0080088","OMIM:161050","DOID:0080079","GARD:10363","ICD9:703.8","MEDGEN:96056","MESH:C562907","SCTID:238719003","UMLS:C0406443"],"synonyms":[{"name":"FZD6 inherited isolated nail anomaly","type":"exact"},{"name":"NDNC1","type":"related"},{"name":"NDNC10","type":"related"},{"name":"autosomal dominant nail dysplasia","type":"related"},{"name":"autosomal recessive nail dysplasia","type":"related"},{"name":"claw-Shaped nails","type":"related"},{"name":"idiopathic trachyonychia","type":"related"},{"name":"inherited isolated nail anomaly caused by mutation in FZD6","type":"exact"},{"name":"nail Growth","type":"related"},{"name":"nail disorder, nonsyndromic congenital 1","type":"related"},{"name":"nail disorder, nonsyndromic congenital, 1","type":"related"},{"name":"nail disorder, nonsyndromic congenital, 10","type":"related"},{"name":"nail disorder, nonsyndromic congenital, type 10","type":"exact"},{"name":"nonsyndromic congenital nail disorder 10","type":"exact"},{"name":"nonsyndromic congenital nail disorder type 1","type":"exact"},{"name":"nonsyndromic congenital nail disorder type 10","type":"exact"},{"name":"onychauxis, hyponychia, and onycholysis","type":"related"},{"name":"onychodystrophy totalis","type":"exact"},{"name":"onychodystrophy totalis, isolated","type":"related"},{"name":"sandpaper nails","type":"related"},{"name":"trachyonychia","type":"related"},{"name":"twenty nail dystrophy","type":"related"},{"name":"twenty-nail dystrophy","type":"exact"}],"termid":"MONDO:0008060","xrefs":{"Monarch":{"xref_id":"0008060"}}}


id: GO:0050747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving lipoproteins, any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of lipoprotein metabolic process","termid":"GO:0050746"},{"relation_name":"is_a","term_name":"positive regulation of protein metabolic process","termid":"GO:0051247"},{"relation_name":"positively_regulates","term_name":"lipoprotein metabolic process","termid":"GO:0042157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lipoprotein metabolic process","synonyms":[{"name":"activation of lipoprotein metabolic process","type":"narrow"},{"name":"positive regulation of lipoprotein metabolism","type":"exact"},{"name":"stimulation of lipoprotein metabolic process","type":"narrow"},{"name":"up regulation of lipoprotein metabolic process","type":"exact"},{"name":"up-regulation of lipoprotein metabolic process","type":"exact"},{"name":"upregulation of lipoprotein metabolic process","type":"exact"}],"termid":"GO:0050747"}


id: GO:1900722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein adenylylation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"protein adenylylation","termid":"GO:0018117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein adenylylation","synonyms":[{"name":"regulation of protein AMPylation","type":"exact"},{"name":"regulation of protein adenylation","type":"exact"},{"name":"regulation of protein amino acid adenylylation","type":"exact"}],"termid":"GO:1900722"}


id: GO:0003299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The enlargement or overgrowth of all or part of a muscle organ or tissue due to an increase in the size of its muscle cells as a result of a disturbance in organismal or cellular homeostasis.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"muscle hypertrophy","termid":"GO:0014896"},{"relation_name":"is_a","term_name":"muscle adaptation","termid":"GO:0043500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle hypertrophy in response to stress","termid":"GO:0003299"}


id: SO:0002205
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory element that acts in response to a stimulus, usually via transcription factor binding.","direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"response_element","synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:response_element","type":"exact"},{"name":"response element","type":"exact"}],"termid":"SO:0002205"}


id: PBO:0114521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-H4 chaperone, CAF assembly factor (CAF-1) complex WD repeat subunit C, Pcf3","termid":"PBO:0114521"}


id: MONDO:0800197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"color vision disorder","termid":"MONDO:0001703"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achromatopsia 6","secondary_identifiers":["MEDGEN:765141","UMLS:C3552227"],"synonyms":[{"name":"ACHM6","type":"exact"}],"termid":"MONDO:0800197","xrefs":{"Monarch":{"xref_id":"0800197"}}}


id: FYPO:0001109
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of menadione than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0002682","FYPO:0000003"],"is_obsolete":false,"name":"resistance to menadione","synonyms":[{"name":"resistance to menadione during mitotic cell cycle","type":"related"},{"name":"resistance to menadione during vegetative growth","type":"exact"},{"name":"resistance to vitamin K3","type":"related"},{"name":"resistant to menadione","type":"exact"}],"termid":"FYPO:0001109"}


id: PBO:0087950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation initiation factor eIF4G and scaffold protein; subunit of the mRNA cap-binding protein complex (eIF4F) with eIF4E (Cdc33p) and eIF4A (Tif1p/Tif2p); stimulates the ATPase and helicase activities of eIF4A synergistically with eIF4G; required with eIF4E for Ded1p-mediated stimulation of mRNA recruitment during 48S preinitiation complex (PIC) assembly; association with Pab1p mediates poly(A) tail-stimulated translation; role in biogenesis of the 60S ribosomal subunit","termid":"PBO:0087950"}


id: GO:1902386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycyrrhetinate.","definition_xrefs":["GOC:TermGenie","PMID:22128119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentacyclic triterpenoid biosynthetic process","termid":"GO:0019745"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"glycyrrhetinate metabolic process","termid":"GO:1902384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glycyrrhetinate biosynthetic process","synonyms":[{"name":"glycyrrhetinate anabolism","type":"exact"},{"name":"glycyrrhetinate biosynthesis","type":"exact"},{"name":"glycyrrhetinate formation","type":"exact"},{"name":"glycyrrhetinate synthesis","type":"exact"}],"termid":"GO:1902386"}


id: PBO:0089455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIA complex small subunit Toa2","termid":"PBO:0089455"}


id: GO:0032340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of inhibin from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inhibin secretion","termid":"GO:0032338"},{"relation_name":"is_a","term_name":"positive regulation of hormone secretion","termid":"GO:0046887"},{"relation_name":"positively_regulates","term_name":"inhibin secretion","termid":"GO:0032334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of inhibin secretion","synonyms":[{"name":"activation of inhibin secretion","type":"narrow"},{"name":"stimulation of inhibin secretion","type":"narrow"},{"name":"up regulation of inhibin secretion","type":"exact"},{"name":"up-regulation of inhibin secretion","type":"exact"},{"name":"upregulation of inhibin secretion","type":"exact"}],"termid":"GO:0032340"}


id: PBO:0062044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 29","termid":"PBO:0062044"}


id: PBO:0055541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2977","termid":"PBO:0055541"}


id: MONDO:0007303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rib that is attached to a cervical vertebra or enlarged transverse processes.","definition_xrefs":["OMIM:117900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"bone disorder","termid":"MONDO:0005381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical rib disease","secondary_identifiers":["MEDGEN:102359","SCTID:72535009","HP:0000891","ICD9:756.2","NCIT:C158329","MESH:D002573","MedDRA:10008301","UMLS:C0158779"],"synonyms":[{"name":"cervical rib","type":"exact"},{"name":"cervical rib syndrome","type":"exact"}],"termid":"MONDO:0007303","xrefs":{"Monarch":{"xref_id":"0007303"}}}


id: GO:0061709
data:
  {"annotated_genes":["SJAG_03170","SJAG_04502","SJAG_02539","SJAG_04435","SJAG_04219","SJAG_02852","SJAG_04655","SJAG_01135","SJAG_00059","SJAG_00004","SJAG_03100","SJAG_03851","SJAG_04232","SJAG_05289","SJAG_00053","SJAG_01382","SJAG_04991"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72134,79073,89892,98901,99202,99481,102931,103092,103881,104327,108053,108143,110153,114721,116092,117317],"is_not":false,"summary":null,"term":"GO:0061709"},{"annotations":[88998],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140501"}]},"cv_name":"biological_process","definition":"The selective autohagy process in which parts of the endoplasmic reticulum are loaded into autophagosomes, delivered to the vacuole, and degraded in response to changing cellular conditions.","definition_xrefs":["PMID:26040717","PMID:22481944","PMID:24060720","GOC:autophagy","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00004":null,"SJAG_00053":null,"SJAG_00059":null,"SJAG_01135":null,"SJAG_01382":null,"SJAG_02539":null,"SJAG_02852":null,"SJAG_03100":null,"SJAG_03170":null,"SJAG_03851":null,"SJAG_04219":null,"SJAG_04232":null,"SJAG_04435":null,"SJAG_04502":null,"SJAG_04655":null,"SJAG_04991":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"reticulophagy","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1990766"],"synonyms":[{"name":"ER autophagy","type":"exact"},{"name":"ER degradation","type":"related"},{"name":"ER-phagy","type":"exact"},{"name":"autophagy of the ER","type":"exact"},{"name":"autophagy of the endoplasmic reticulum","type":"exact"},{"name":"endoplasmic reticulum autophagy","type":"exact"},{"name":"endoplasmic reticulum degradation","type":"related"}],"termid":"GO:0061709","terms_by_termid":{"GO:0061709":null,"GO:0140501":null}}


id: GO:0070157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling proline to prolyl-tRNA in a mitochondrion, catalyzed by prolyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prolyl-tRNA aminoacylation","termid":"GO:0006433"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0140053","GO:0006520","GO:0006399"],"is_obsolete":false,"name":"mitochondrial prolyl-tRNA aminoacylation","termid":"GO:0070157"}


id: PBO:0049173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth factor receptor bound protein 2","termid":"PBO:0049173"}


id: PBO:0113340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; well conserved across Saccharomyces species; added to genome annotation based on proteomic, translation, and evolutionary evidence","termid":"PBO:0113340"}


id: GO:0006935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taxis","termid":"GO:0042330"},{"relation_name":"part_of","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemotaxis","secondary_identifiers":["Wikipedia:Chemotaxis"],"synonyms":[{"name":"taxis in response to chemical stimulus","type":"exact"}],"termid":"GO:0006935"}


id: MONDO:0043579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the small intestine.","definition_xrefs":["NCIT:C26765"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastroenteritis","termid":"MONDO:0002269"},{"relation_name":"is_a","term_name":"small intestine disorder","termid":"MONDO:0024635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"enteritis","secondary_identifiers":["MESH:D004751","SCTID:64613007","MEDGEN:4964","UMLS:C0014335"],"synonyms":[{"name":"Enteritides","type":"related"},{"name":"enteritis","type":"exact"},{"name":"enteritis of small intestine","type":"exact"},{"name":"enteritis, inflammatory disorder of small intestine","type":"related"},{"name":"inflammation of small intestine","type":"exact"},{"name":"small intestine inflammation","type":"exact"}],"termid":"MONDO:0043579","xrefs":{"Monarch":{"xref_id":"0043579"}}}


id: PBO:0090150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEM domain nuclear inner membrane protein Man1, Sad1 interacting factor","termid":"PBO:0090150"}


id: GO:0071747
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An IgA immunoglobulin complex that is present in the plasma membrane of B cells and is composed of two identical immunoglobulin heavy chains of an IgA isotype and two identical immunoglobulin light chains and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins.","definition_xrefs":["GOC:add","ISBN:0781765196","PMID:16362985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell receptor complex","termid":"GO:0019815"},{"relation_name":"is_a","term_name":"IgA immunoglobulin complex","termid":"GO:0071745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"IgA B cell receptor complex","synonyms":[{"name":"membrane-bound IgA","type":"narrow"},{"name":"membrane-bound IgA1","type":"narrow"},{"name":"membrane-bound IgA2","type":"narrow"},{"name":"surface IgA","type":"narrow"},{"name":"surface IgA1","type":"narrow"},{"name":"surface IgA2","type":"narrow"}],"termid":"GO:0071747"}


id: PBO:0091107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wybutosine biosynthesis protein Tyw3","termid":"PBO:0091107"}


id: MONDO:0020818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dentin formed by normal pulp after completion of root end formation.","definition_xrefs":["MESH:D003809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dental pulp disorder","termid":"MONDO:0003394"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secondary dentine","secondary_identifiers":["UMLS:C0011434","MEDGEN:3746","SCTID:59818004"],"synonyms":[{"name":"DENTIN SECOND","type":"related"},{"name":"Dentin, Secondary","type":"related"},{"name":"Dentins, Secondary","type":"related"},{"name":"Irregular dentin","type":"related"},{"name":"Irregular dentine","type":"related"},{"name":"Reparative dentine","type":"related"},{"name":"SECOND DENTIN","type":"related"},{"name":"Sclerotic dentine","type":"related"},{"name":"Secondary Dentin","type":"related"},{"name":"Secondary Dentins","type":"related"},{"name":"Secondary dentin","type":"related"},{"name":"Secondary dentine","type":"related"},{"name":"Tertiary dentine","type":"related"},{"name":"irregular dentin","type":"related"},{"name":"irregular dentine","type":"related"},{"name":"reparative dentine","type":"related"},{"name":"sclerotic dentine","type":"related"},{"name":"secondary dentin","type":"exact"},{"name":"secondary dentine","type":"exact"},{"name":"tertiary dentine","type":"related"}],"termid":"MONDO:0020818","xrefs":{"Monarch":{"xref_id":"0020818"}}}


id: GO:0033915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->2) and (1->3) linkages in mannan, releasing mannose.","definition_xrefs":["EC:3.2.1.77"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-mannosidase activity","termid":"GO:0004559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"mannan 1,2-(1,3)-alpha-mannosidase activity","secondary_identifiers":["MetaCyc:3.2.1.77-RXN"],"synonyms":[{"name":"1,2-1,3-alpha-D-mannan mannohydrolase activity","type":"related"},{"name":"exo-1,2-1,3-alpha-mannosidase activity","type":"related"}],"termid":"GO:0033915"}


id: PBO:0070377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"roundabout guidance receptor 3","termid":"PBO:0070377"}


id: PR:000050251
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein rho2 (Schizosaccharomyces pombe) that is non-covalently bound to GTP.","definition_xrefs":["PomBase:MAH","PRO:DAN","PMID:26960792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP-binding protein rho2 (Schizosaccharomyces pombe)","termid":"PR:000050250"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho2</GTP+","pombase_gene_id":"SPAC16.01","synonyms":[{"name":"PomBase_original_PRO_term_name: GTP-binding protein rho2, GTP-bound form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rho2/GTP+","type":"exact"},{"name":"rho2</GTP+","type":"exact"}],"termid":"PR:000050251"}


id: PBO:0003013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 protein family 4","termid":"PBO:0003013"}


id: MONDO:0017952
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-familial rare disease with dilated cardiomyopathy (obsolete MONDO:0017952)","secondary_identifiers":["Orphanet:324767"],"termid":"MONDO:0017952","xrefs":{"Monarch":{"xref_id":"0017952"}}}


id: GO:0110105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the mRNA cleavage and polyadenylation specificity factor complex.","definition_xrefs":["GOC:mah","PMID:27401558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"RNA 3'-end processing","termid":"GO:0031123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0010467","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex assembly","termid":"GO:0110105"}


id: PATO:0002470
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphological quality between two bearers inhering that one bearer is subject to change the nature, function, or condition of itself to become the other.","definition_xrefs":["PATOC:LC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphology","termid":"PATO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transformed to","termid":"PATO:0002470"}


id: GO:0140630
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 geranylgeranyl diphosphate -> all-trans-phytoene + 2 diphosphate.","definition_xrefs":["PMID:7896759","PMID:12641468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"all-trans-phytoene synthase activity","synonyms":[{"name":"phytoene synthase activity","type":"broad"}],"termid":"GO:0140630"}


id: PBO:0003247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3-phosphate dehydrogenase Gpd3","termid":"PBO:0003247"}


id: PBO:0001778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication protein Cdc24","termid":"PBO:0001778"}


id: PBO:0069397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 657, pseudogene","termid":"PBO:0069397"}


id: GO:0097129
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin D2 and cyclin-dependent kinase 4 (CDK4). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["GOC:so","PMID:15935619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cyclin D2-CDK4 complex","termid":"GO:0097129"}


id: SO:0000048
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"To substitute a subsection of sequence for another.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000048 substitute (obsolete SO:0000048)","termid":"SO:0000048"}


id: PBO:0068410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein, transmembrane 1 pseudogene 1","termid":"PBO:0068410"}


id: PR:O74762
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome non-ATPase regulatory subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10943:SF2","OMA:SCHPO03658","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit rpn2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D11.07c","secondary_identifiers":["UniProtKB:O74762"],"synonyms":[{"name":"Spom972h-PSMD1","type":"exact"}],"termid":"PR:O74762"}


id: PBO:0051867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon stimulated exonuclease gene 20 like 2","termid":"PBO:0051867"}


id: GO:0051371
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to muscle isoforms of actinin. Muscle alpha-actinin isoforms are found in skeletal and cardiac muscle and are localized to the Z-disc.","definition_xrefs":["PMID:15014165","PMID:10984498","PMID:11699871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-actinin binding","termid":"GO:0051393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0008092","GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"muscle alpha-actinin binding","synonyms":[{"name":"alpha-actinin 2 binding","type":"narrow"},{"name":"alpha-actinin 3 binding","type":"narrow"}],"termid":"GO:0051371"}


id: PBO:0091145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-mannosyltransferase II complex subunit Pga1","termid":"PBO:0091145"}


id: PBO:0065448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 5","termid":"PBO:0065448"}


id: PBO:0077450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 183A","termid":"PBO:0077450"}


id: GO:0045686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of glia cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gliogenesis","termid":"GO:0014014"},{"relation_name":"is_a","term_name":"regulation of glial cell differentiation","termid":"GO:0045685"},{"relation_name":"negatively_regulates","term_name":"glial cell differentiation","termid":"GO:0010001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glial cell differentiation","synonyms":[{"name":"down regulation of glial cell differentiation","type":"exact"},{"name":"down-regulation of glial cell differentiation","type":"exact"},{"name":"downregulation of glial cell differentiation","type":"exact"},{"name":"inhibition of glial cell differentiation","type":"narrow"},{"name":"negative regulation of glia cell differentiation","type":"exact"},{"name":"negative regulation of neuroglia differentiation","type":"exact"}],"termid":"GO:0045686"}


id: PBO:0027732
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_DNA_replication_initiation","termid":"PBO:0027732"}


id: PBO:0001877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex non-SMC subunit 2","termid":"PBO:0001877"}


id: GO:0046188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of methane, a colorless, odorless, flammable gas with the formula CH4. It is the simplest of the alkanes.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methane metabolic process","termid":"GO:0015947"},{"relation_name":"is_a","term_name":"alkane catabolic process","termid":"GO:0043448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methane catabolic process","synonyms":[{"name":"methane breakdown","type":"exact"},{"name":"methane catabolism","type":"exact"},{"name":"methane degradation","type":"exact"}],"termid":"GO:0046188"}


id: PBO:0075442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPARC like 1","termid":"PBO:0075442"}


id: PBO:0070937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 45","termid":"PBO:0070937"}


id: PBO:0060143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotrophin","termid":"PBO:0060143"}


id: PBO:0000681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex subunit Ies6","termid":"PBO:0000681"}


id: PBO:0038543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABHD15 antisense RNA 1","termid":"PBO:0038543"}


id: MOD:00358
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to 3'-(8alpha-FMN)-L-histidine.","definition_xrefs":["RESID:AA0353","Unimod:409#H","PubMed:12417325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FMN modified residue","termid":"MOD:00896"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-(8alpha-FMN)-L-histidine","synonyms":[{"name":"(S)-2-amino-3-(3-[8alpha riboflavin 5'-dihydrogen phosphate]imidazol-4-yl)propanoic acid","type":"exact"},{"name":"3'-(8alpha-FMN)-L-histidine","type":"exact"},{"name":"8alpha-(N(delta)-histidyl)FMN","type":"exact"},{"name":"8alpha-(N3'-histidyl)FMN","type":"exact"},{"name":"FMNH","type":"related"},{"name":"N(pi)-(8alpha-FMN)-histidine","type":"exact"},{"name":"Npros8aFMNHis","type":"exact"},{"name":"flavin mononucleotide","type":"related"},{"name":"pros-(8alpha-FMN)-histidine","type":"exact"}],"termid":"MOD:00358"}


id: GO:1905868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of 3'-UTR-mediated mRNA stabilization.","definition_xrefs":["PMID:19737525","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA stability","termid":"GO:0043488"},{"relation_name":"regulates","term_name":"3'-UTR-mediated mRNA stabilization","termid":"GO:0070935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"regulation of 3'-UTR-mediated mRNA stabilization","synonyms":[{"name":"regulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"}],"termid":"GO:1905868"}


id: GO:0072537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in the morphology or behavior of a fibroblast resulting from exposure to an activating factor such as a cellular or soluble ligand.","definition_xrefs":["CL:0000057","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fibroblast activation","termid":"GO:0072537"}


id: PBO:0031215
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_oxidation_during_vegetative_growth","termid":"PBO:0031215"}


id: PBO:0056642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 15 pseudogene 3","termid":"PBO:0056642"}


id: SO:0000572
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in partially rearranged genomic DNA including D-J-region with 5' UTR and 3' UTR, also designated as D-J-segment.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_segment","termid":"SO:0000936"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DJ_gene_segment","synonyms":[{"name":"D-J-GENE","type":"exact"},{"name":"DJ gene","type":"exact"}],"termid":"SO:0000572"}


id: MONDO:0003740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An overwhelming, irrational, and persistent fear of contracting Acquired Immune Deficiency Syndrome.","definition_xrefs":["NCIT:C35614"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nosophobia","termid":"MONDO:0000600"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AIDS phobia","secondary_identifiers":["MEDGEN:167692","UMLS:C0853870","DOID:603"],"synonyms":[{"name":"AIDS phobia","type":"exact"}],"termid":"MONDO:0003740","xrefs":{"Monarch":{"xref_id":"0003740"}}}


id: MONDO:1011925
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder, non-human animal","termid":"MONDO:0700104"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia, non-human animal","secondary_identifiers":["OMIA:000573"],"termid":"MONDO:1011925","xrefs":{"Monarch":{"xref_id":"1011925"}}}


id: GO:0102066
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = diphosphoric acid + alpha-patchoulene.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-patchoulene synthase activityy (obsolete GO:0102066)","termid":"GO:0102066"}


id: SO:0000557
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"3'-most region of a precursor transcript that is clipped off during processing.","direct_ancestors":[{"relation_name":"is_a","term_name":"clip","termid":"SO:0000303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_clip","synonyms":[{"name":"3'-clip","type":"exact"},{"name":"three prime clip","type":"exact"}],"termid":"SO:0000557"}


id: GO:0006384
data:
  {"annotated_genes":["SJAG_03354","SJAG_03120","SJAG_02815","SJAG_03035","SJAG_01827","SJAG_03007","SJAG_02600","SJAG_00585","SJAG_00067","SJAG_05339","SJAG_00421"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87662,88396,95065,99080,101045,102570,106414,107929,108622,114863],"is_not":false,"summary":null,"term":"GO:0006384"},{"annotations":[115702,102569],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070898"}]},"cv_name":"biological_process","definition":"A transcription initiation process that takes place at a RNA polymerase III gene promoter. Transfer RNAs (tRNA) genes, as well as some other non-coding RNAs, are transcribed by RNA polymerase III.","definition_xrefs":["GOC:txnOH","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription initiation","termid":"GO:0006352"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00067":null,"SJAG_00421":null,"SJAG_00585":null,"SJAG_01827":null,"SJAG_02600":null,"SJAG_02815":null,"SJAG_03007":null,"SJAG_03035":null,"SJAG_03120":null,"SJAG_03354":null,"SJAG_05339":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"transcription initiation at RNA polymerase III promoter","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0001024","GO:0001023","GO:0001036","GO:0001022"],"synonyms":[{"name":"transcription initiation from Pol III promoter","type":"exact"},{"name":"transcription initiation from RNA polymerase III hybrid type promoter","type":"narrow"},{"name":"transcription initiation from RNA polymerase III promoter","type":"exact"},{"name":"transcription initiation from RNA polymerase III type 1 promoter","type":"narrow"},{"name":"transcription initiation from RNA polymerase III type 2 promoter","type":"narrow"},{"name":"transcription initiation from RNA polymerase III type 3 promoter","type":"narrow"}],"termid":"GO:0006384","terms_by_termid":{"GO:0006384":null,"GO:0070898":null}}


id: GO:0098544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein complex is maintained in a location and prevented from moving elsewhere. These include sequestration, stabilization to prevent transport elsewhere and the active retrieval of protein complexes that move away.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"maintenance of location","termid":"GO:0051235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of protein complex location","termid":"GO:0098544"}


id: PBO:0064785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1F","termid":"PBO:0064785"}


id: PBO:0068967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 211, pseudogene","termid":"PBO:0068967"}


id: PBO:0050906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced protein 44 like","termid":"PBO:0050906"}


id: PBO:0048030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fascin actin-bundling protein 1 pseudogene 1","termid":"PBO:0048030"}


id: GO:0005782
data:
  {"annotated_genes":["SJAG_02496","SJAG_00706","SJAG_00947","SJAG_04823","SJAG_02630","SJAG_00702","SJAG_00326"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89914,104797,111322,111339,114240,115256,117786],"is_not":false,"summary":null,"term":"GO:0005782"}]},"cv_name":"cellular_component","definition":"The volume contained within the membranes of a peroxisome; in many cells the matrix contains a crystalloid core largely composed of urate oxidase.","definition_xrefs":["GOC:curators","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microbody lumen","termid":"GO:0031907"},{"relation_name":"part_of","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null,"SJAG_00706":null,"SJAG_00947":null,"SJAG_02496":null,"SJAG_02630":null,"SJAG_04823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005777"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005777","GO:0005575"],"is_obsolete":false,"name":"peroxisomal matrix","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0031909"],"synonyms":[{"name":"peroxisomal lumen","type":"exact"}],"termid":"GO:0005782","terms_by_termid":{"GO:0005782":null}}


id: GO:0015945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methanol, CH3-OH, a colorless, flammable, mobile, poisonous liquid, widely used as a solvent.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"methanol metabolic process","synonyms":[{"name":"methanol metabolism","type":"exact"}],"termid":"GO:0015945"}


id: MONDO:0015546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-distal monosomy 10q is a rare chromosomal anomaly syndrome, resulting from a partial deletion of the long arm of chromosome 10, with a highly variable phenotype principally characterized by developmental delays (usually of language and speech), variable cognitive impairment and neurobehavioral abnormalities such as autism spectrum disorders and attention deficit disorder. Macrocephaly and mild dysmorphic features may by associated. Overlap with other syndromes, such as Cowden syndrome, Bannayan-Riley-Ruvalcaba syndrome and juvenile polyposis syndrome has been reported.","definition_xrefs":["Orphanet:1581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial monosomy of the long arm of chromosome 10","termid":"MONDO:0016909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-distal monosomy 10q","secondary_identifiers":["MEDGEN:1657787","UMLS:C4749375","GARD:18729"],"synonyms":[{"name":"non-distal deletion 10q","type":"exact"},{"name":"non-distal monosomy type 10q","type":"exact"},{"name":"non-telomeric monosomy 10q","type":"exact"}],"termid":"MONDO:0015546","xrefs":{"Monarch":{"xref_id":"0015546"}}}


id: GO:0019381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of atrazine, a triazine ring-containing herbicide.","definition_xrefs":["MetaCyc:PWY-5724","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine catabolic process","termid":"GO:0006598"},{"relation_name":"is_a","term_name":"atrazine metabolic process","termid":"GO:0018873"},{"relation_name":"is_a","term_name":"s-triazine compound catabolic process","termid":"GO:0042204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrazine catabolic process","secondary_identifiers":["UM-BBD_pathwayID:atr"],"synonyms":[{"name":"atrazine breakdown","type":"exact"},{"name":"atrazine catabolism","type":"exact"},{"name":"atrazine degradation","type":"exact"}],"termid":"GO:0019381"}


id: PBO:0058232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4521","termid":"PBO:0058232"}


id: FYPO:0002745
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-proline measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular proline level","synonyms":[{"name":"normal cellular L-proline level","type":"exact"},{"name":"normal cellular proline level during mitotic cell cycle","type":"related"},{"name":"normal cellular proline level during vegetative growth","type":"exact"},{"name":"normal level of proline in cell","type":"exact"}],"termid":"FYPO:0002745"}


id: GO:0070432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the nucleotide-binding oligomerization domain containing 2 (NOD2) pathway.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0070424"},{"relation_name":"regulates","term_name":"nucleotide-binding oligomerization domain containing 2 signaling pathway","termid":"GO:0070431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway","synonyms":[{"name":"regulation of NOD2 signaling pathway","type":"exact"},{"name":"regulation of nucleotide-binding oligomerization domain containing 2 signalling pathway","type":"exact"}],"termid":"GO:0070432"}


id: MONDO:0014114
data:
  {"annotated_genes":["SJAG_01181","SJAG_02342","SJAG_00993"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84519,84520,84521],"is_not":false,"summary":null,"term":"MONDO:0014114"}]},"cv_name":"mondo","definition":"Any cardiofaciocutaneous syndrome in which the cause of the disease is a mutation in the MAP2K2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiofaciocutaneous syndrome","termid":"MONDO:0015280"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_01181":null,"SJAG_02342":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005267"],"is_obsolete":false,"name":"cardiofaciocutaneous syndrome 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:815337","DOID:0111463","GARD:15937","OMIM:615280","UMLS:C3809007"],"synonyms":[{"name":"CFC4","type":"related"},{"name":"MAP2K2 cardiofaciocutaneous syndrome","type":"exact"},{"name":"cardiofaciocutaneous syndrome 4","type":"exact"},{"name":"cardiofaciocutaneous syndrome caused by mutation in MAP2K2","type":"exact"},{"name":"cardiofaciocutaneous syndrome type 4","type":"exact"}],"termid":"MONDO:0014114","terms_by_termid":{"MONDO:0014114":null},"xrefs":{"Monarch":{"xref_id":"0014114"}}}


id: GO:0008174
data:
  {"annotated_genes":["SJAG_05693","SJAG_04034","SJAG_00325","SJAG_02099"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89939,93411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062152"},{"annotations":[116245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004482"},{"annotations":[109255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001734"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a nucleoside residue in an mRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA methyltransferase activity","termid":"GO:0008173"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00325":null,"SJAG_02099":null,"SJAG_04034":null,"SJAG_05693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140098","GO:0016741","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"mRNA methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0008174","terms_by_termid":{"GO:0001734":null,"GO:0004482":null,"GO:0062152":null}}


id: PBO:0005153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CASP family protein involved in Golgi vesicle transport (predicted)","termid":"PBO:0005153"}


id: PBO:0057863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3174","termid":"PBO:0057863"}


id: GO:0002881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of a chronic inflammatory response to a non-antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chronic inflammatory response","termid":"GO:0002677"},{"relation_name":"is_a","term_name":"regulation of chronic inflammatory response to non-antigenic stimulus","termid":"GO:0002880"},{"relation_name":"negatively_regulates","term_name":"chronic inflammatory response to non-antigenic stimulus","termid":"GO:0002545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chronic inflammatory response to non-antigenic stimulus","synonyms":[{"name":"down regulation of chronic inflammatory response to non-antigenic stimulus","type":"exact"},{"name":"down-regulation of chronic inflammatory response to non-antigenic stimulus","type":"exact"},{"name":"downregulation of chronic inflammatory response to non-antigenic stimulus","type":"exact"},{"name":"inhibition of chronic inflammatory response to non-antigenic stimulus","type":"narrow"}],"termid":"GO:0002881"}


id: PBO:0036043
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K14_acetylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036043"}


id: FYPO:0006795
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to actin cortical patches is abolished, and some of the protein is present in the nucleus instead.","definition_xrefs":["PMID:11076964","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"},{"relation_name":"is_a","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"},{"relation_name":"is_a","term_name":"abolished protein localization to actin cortical patch","termid":"FYPO:0006116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to actin cortical patch, with protein mislocalized to nucleus","synonyms":[{"name":"abolished protein localisation to actin cortical patch, with protein mislocalised to nucleus, during vegetative growth","type":"exact"},{"name":"abolished protein localization to actin cortical patch, with protein mislocalized to nucleus, during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to actin cortical patch, with protein mislocalized to nucleus, during vegetative growth","type":"exact"},{"name":"abolished protein localization to actin patch, with protein mislocalized to nucleus","type":"exact"},{"name":"protein localization to actin cortical patch abolished, with protein mislocalized to nucleus, during vegetative growth","type":"exact"}],"termid":"FYPO:0006795"}


id: MONDO:0022412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete albinism immunodeficiency (obsolete MONDO:0022412)","termid":"MONDO:0022412","xrefs":{"Monarch":{"xref_id":"0022412"}}}


id: GO:0140917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed import of zinc(2+) from the cytosol, across an organelle membrane, into a mitochondrion.","definition_xrefs":["PMID:21289295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion import into organelle","termid":"GO:0062111"},{"relation_name":"is_a","term_name":"import into the mitochondrion","termid":"GO:0170036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"zinc ion import into mitochondrion","termid":"GO:0140917"}


id: GO:0033980
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phosphonopyruvate + 2 H+ = CO2 + phosphonoacetaldehyde.","definition_xrefs":["EC:4.1.1.82","RHEA:20768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"phosphonopyruvate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R04053","MetaCyc:4.1.1.82-RXN"],"synonyms":[{"name":"3-phosphonopyruvate carboxy-lyase (2-phosphonoacetaldehyde-forming) activity","type":"related"},{"name":"3-phosphonopyruvate carboxy-lyase activity","type":"related"}],"termid":"GO:0033980"}


id: PBO:0089004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino]imidazole-4-carboxamide isomerase His6","termid":"PBO:0089004"}


id: FYPO:0001771
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a tRNA methyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abnormal tRNA methyltransferase activity","termid":"FYPO:0001771"}


id: MONDO:0017695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease due to glycogen branching enzyme deficiency","termid":"MONDO:0009292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"glycogen storage disease due to glycogen branching enzyme deficiency, progressive hepatic form","secondary_identifiers":["GARD:17394","MEDGEN:1826169","NANDO:2201159","Orphanet:308621","UMLS:C5679972"],"synonyms":[{"name":"GBE deficiency, progressive hepatic form","type":"exact"},{"name":"GSD due to glycogen branching enzyme deficiency, progressive hepatic form","type":"exact"},{"name":"GSD type 4, progressive hepatic form","type":"exact"},{"name":"GSDIV, progressive hepatic form","type":"exact"},{"name":"glycogen storage disease type 4, progressive hepatic form","type":"exact"},{"name":"glycogen storage disease type IV, progressive hepatic form","type":"exact"},{"name":"glycogenosis due to glycogen branching enzyme deficiency, progressive hepatic form","type":"exact"},{"name":"glycogenosis type 4, progressive hepatic form","type":"exact"},{"name":"glycogenosis type IV, progressive hepatic form","type":"exact"}],"termid":"MONDO:0017695","xrefs":{"Monarch":{"xref_id":"0017695"}}}


id: MONDO:0002163
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well-circumscribed tumor of the thymus composed of islands of normal thymic parenchyma and mature adipose tissue. It is not clear if thymolipoma is a neoplastic or non-neoplastic lesion.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"},{"relation_name":"is_a","term_name":"benign neoplasm of thymus","termid":"MONDO:0021512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"thymus lipoma","secondary_identifiers":["UMLS:C1336744","DOID:1975","NCIT:C6452","MEDGEN:234427"],"synonyms":[{"name":"Thymolipoma","type":"exact"},{"name":"Thymolipomatous hamartoma","type":"exact"},{"name":"lipoma of thymus","type":"exact"},{"name":"thymus lipoma","type":"exact"}],"termid":"MONDO:0002163","xrefs":{"Monarch":{"xref_id":"0002163"}}}


id: PBO:0034191
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-subject_participant_in","termid":"PBO:0034191"}


id: MONDO:0022989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diomedi bernardi placidi syndrome","termid":"MONDO:0022989","xrefs":{"Monarch":{"xref_id":"0022989"}}}


id: PBO:0003707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein Rec6","termid":"PBO:0003707"}


id: PBO:0017753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex, platform subcomplex scaffold subunit Apc4/Cut20","termid":"PBO:0017753"}


id: GO:0016215
data:
  {"annotated_genes":["SJAG_03943"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004768"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: AH2 + O2 + octadecanoyl-CoA = (9Z)-octadecenoyl-CoA + A + 2 H2O.","definition_xrefs":["RHEA:25416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03943":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"acyl-CoA desaturase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CoA desaturase activity","type":"broad"}],"termid":"GO:0016215","terms_by_termid":{"GO:0004768":null}}


id: GO:0048697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of collateral sprouting in the absence of injury.","definition_xrefs":["GOC:dgh","GOC:lm","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of collateral sprouting","termid":"GO:0048672"},{"relation_name":"is_a","term_name":"regulation of collateral sprouting in absence of injury","termid":"GO:0048696"},{"relation_name":"positively_regulates","term_name":"collateral sprouting in absence of injury","termid":"GO:0048669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of collateral sprouting in absence of injury","synonyms":[{"name":"activation of collateral sprouting in the absence of injury","type":"narrow"},{"name":"stimulation of collateral sprouting in the absence of injury","type":"narrow"},{"name":"up regulation of collateral sprouting in the absence of injury","type":"exact"},{"name":"up-regulation of collateral sprouting in the absence of injury","type":"exact"},{"name":"upregulation of collateral sprouting in the absence of injury","type":"exact"}],"termid":"GO:0048697"}


id: MONDO:0007158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal arthrogryposis type 5 is an inherited developmental defect syndrome characterized by multiple congenital contractures of limbs, without primary neurologic and/or muscle disease that affects limb function, and ocular anomalies (ptosis, external ophtalmoplegia and/or strabismus). Intelligence is normal.","definition_xrefs":["Orphanet:1154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis- oculomotor limitation-electroretinal anomalies syndrome","secondary_identifiers":["UMLS:C1862472","DOID:0111608","GARD:4047","MEDGEN:350678","OMIM:108145","SCTID:715217004"],"synonyms":[{"name":"Arthogryposis with oculomotor limitation and electroretinal abnormalities","type":"related"},{"name":"DA5","type":"related"},{"name":"arthrogryposis ophthalmoplegia retinopathy","type":"related"},{"name":"arthrogryposis with oculomotor limitation and electroretinal abnormalities","type":"related"},{"name":"arthrogryposis, distal, type 2B","type":"related"},{"name":"arthrogryposis, distal, type 5","type":"related"},{"name":"arthrogryposis- oculomotor limitation-electroretinal anomalies syndrome","type":"exact"},{"name":"arthrogryposis-oculomotor limitation-electroretinal anomalies syndrome","type":"related"},{"name":"distal arthrogryposis type 5","type":"exact"},{"name":"distal arthrogryposis type IIB","type":"exact"},{"name":"distal arthrogryposis with ophthalmoplegia","type":"exact"},{"name":"oculomelic amyoplasia","type":"exact"}],"termid":"MONDO:0007158","xrefs":{"Monarch":{"xref_id":"0007158"}}}


id: PBO:0042777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 89","termid":"PBO:0042777"}


id: PBO:0030816
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_aconitate_hydratase_activity","termid":"PBO:0030816"}


id: GO:0017121
data:
  {"annotated_genes":["SJAG_01470"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96110],"is_not":false,"summary":null,"term":"GO:0017121"}]},"cv_name":"biological_process","definition":"The movement of a population of phospholipid molecules from one leaflet of the plasma membrane bilayer to the opposite leaflet, resulting in loss of lipid asymmetry and surface exposure of phosphatidylserine (PS) and phosphatidylethanolamine (PE).","definition_xrefs":["GOC:cjm","PMID:20043909","PMID:20302864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"is_a","term_name":"phospholipid translocation","termid":"GO:0045332"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01470":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"plasma membrane phospholipid scrambling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PL scrambling","type":"exact"},{"name":"phospholipid scrambling","type":"related"}],"termid":"GO:0017121","terms_by_termid":{"GO:0017121":null}}


id: GO:1903661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of complement-dependent cytotoxicity.","definition_xrefs":["PMID:24280217","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell killing","termid":"GO:0031343"},{"relation_name":"is_a","term_name":"regulation of complement-dependent cytotoxicity","termid":"GO:1903659"},{"relation_name":"positively_regulates","term_name":"complement-dependent cytotoxicity","termid":"GO:0097278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of complement-dependent cytotoxicity","synonyms":[{"name":"activation of complement-dependent cytotoxicity","type":"narrow"},{"name":"up regulation of complement-dependent cytotoxicity","type":"exact"},{"name":"up-regulation of complement-dependent cytotoxicity","type":"exact"},{"name":"upregulation of complement-dependent cytotoxicity","type":"exact"}],"termid":"GO:1903661"}


id: MONDO:0011505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypobetalipoproteinemia in which the cause of the disease is a mutation in the ANGPTL3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypobetalipoproteinemia","termid":"MONDO:0017774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"familial hypobetalipoproteinemia 2","secondary_identifiers":["UMLS:C1857970","DOID:0111061","GARD:15376","MEDGEN:341895","MESH:C565732","OMIM:605019"],"synonyms":[{"name":"ANGPTL3 hypobetalipoproteinemia","type":"exact"},{"name":"FHBL2","type":"exact"},{"name":"combined familial hypolipidemia","type":"exact"},{"name":"familial hypobetalipoproteinemia 2","type":"exact"},{"name":"familial hypobetalipoproteinemia type 2","type":"exact"},{"name":"hypobetalipoproteinemia caused by mutation in ANGPTL3","type":"exact"},{"name":"hypobetalipoproteinemia, familial, 2","type":"related"},{"name":"hypobetalipoproteinemia, familial, type 2","type":"exact"},{"name":"hypolipidemia, familial, combined","type":"related"}],"termid":"MONDO:0011505","xrefs":{"Monarch":{"xref_id":"0011505"}}}


id: MONDO:0033621
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85217],"is_not":false,"summary":null,"term":"MONDO:0033621"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"is_obsolete":false,"name":"spinal muscular atrophy, infantile, James type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1764556","UMLS:C5436669","OMIM:619042"],"synonyms":[{"name":"SMAJI","type":"exact"}],"termid":"MONDO:0033621","terms_by_termid":{"MONDO:0033621":null},"xrefs":{"Monarch":{"xref_id":"0033621"}}}


id: GO:0000949
data:
  {"annotated_genes":["SJAG_02734","SJAG_04842","SJAG_03743"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87980,96751,96752],"is_not":false,"summary":null,"term":"GO:0000949"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving the catabolism of aromatic amino acids to produce aromatic alcohols with one carbon less than the starting amino acid. In S. cerevisiae, this is known to occur for leucine, isoleucine, valine, methionine, phenylalanine, tyrosine, or tryptophan. When an aromatic family amino acid, phenylalanine, tyrosine, or tryptophan, is used as the substrate, 2-phenylethanol, 4-hydroxyphenylethanol, or tryptophol, respectively, is produced. Often referred to as the Ehrlich pathway, these reactions generally occur during fermentation to produce a variety of alcohols, often collectively referred to as fusel alcohols. Depending on the redox state of the cells, carboxylic acid derivatives may be produced instead of alcohols.","definition_xrefs":["GOC:krc","PMID:18281432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process to alcohol via Ehrlich pathway","termid":"GO:0000947"},{"relation_name":"is_a","term_name":"aromatic amino acid family catabolic process","termid":"GO:0009074"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02734":null,"SJAG_03743":null,"SJAG_04842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"aromatic amino acid family catabolic process to alcohol via Ehrlich pathway","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000949","terms_by_termid":{"GO:0000949":null}}


id: MONDO:0020333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aggressive systemic mastocytosis (ASM) is a severe and rare form of systemic mastocytosis (SM) characterized by considerable infiltration of mast cells in different tissues.","definition_xrefs":["Orphanet:98850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"systemic mastocytosis","termid":"MONDO:0016586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"aggressive systemic mastocytosis","secondary_identifiers":["GARD:19597","MEDGEN:206813","NCIT:C9285","ICDO:9741/3","SCTID:716655008","UMLS:C1112486","MedDRA:10056453","ONCOTREE:ASM","icd11.foundation:870477963","DOID:4798"],"synonyms":[{"name":"ASM","type":"exact"},{"name":"aggressive systemic mastocytosis (morphologic abnormality)","type":"exact"},{"name":"lymphadenopathic mastocytosis with eosinophilia","type":"exact"}],"termid":"MONDO:0020333","xrefs":{"Monarch":{"xref_id":"0020333"}}}


id: PBO:0080746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X antigen family member 1B","termid":"PBO:0080746"}


id: FYPO:0007603
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate or other property of a microfilament motor activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microfilament motor activity","termid":"FYPO:0006093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"decreased microfilament motor activity","synonyms":[{"name":"decreased actin filament motor activity","type":"exact"},{"name":"decreased microfilament motor (ATPase) activity","type":"exact"},{"name":"decreased myosin ATPase activity","type":"related"},{"name":"reduced microfilament motor activity","type":"exact"}],"termid":"FYPO:0007603"}


id: GO:0009384
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + N-acyl-D-mannosamine = ADP + N-acyl-D-mannosamine 6-phosphate.","definition_xrefs":["EC:2.7.1.60"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"N-acylmannosamine kinase activity","secondary_identifiers":["Reactome:R-HSA-4088322","RHEA:23832","MetaCyc:N-ACYLMANNOSAMINE-KINASE-RXN","Reactome:R-HSA-4085028"],"synonyms":[{"name":"ATP:N-acetylmannosamine 6-phosphotransferase activity","type":"related"},{"name":"ATP:N-acyl-D-mannosamine 6-phosphotransferase activity","type":"related"},{"name":"N-acetylmannosamine kinase activity","type":"related"},{"name":"N-acyl-D-mannosamine kinase activity","type":"related"},{"name":"acetylamidodeoxymannokinase activity","type":"related"},{"name":"acetylmannosamine kinase activity","type":"related"},{"name":"acylaminodeoxymannokinase activity","type":"related"},{"name":"acylmannosamine kinase (phosphorylating)","type":"related"},{"name":"acylmannosamine kinase activity","type":"related"}],"termid":"GO:0009384"}


id: GO:0008228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a microorganism (or other particulate material) is rendered more susceptible to phagocytosis by coating with an opsonin, a blood serum protein such as a complement component or antibody.","definition_xrefs":["ISBN:0781735149","ISBN:068340007X","GOC:mah","ISBN:0198506732","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"},{"relation_name":"positively_regulates","term_name":"phagocytosis, recognition","termid":"GO:0006910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"opsonization","secondary_identifiers":["Wikipedia:Opsonin"],"termid":"GO:0008228"}


id: FYPO:0003108
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the telomere of a chromosome is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromosome during vegetative growth","termid":"FYPO:0002838"},{"relation_name":"is_a","term_name":"abnormal protein localization to telomere","termid":"FYPO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein localization to telomere during vegetative growth","synonyms":[{"name":"abnormal protein localisation to chromosome, telomeric region, during vegetative growth","type":"exact"},{"name":"abnormal protein localisation to telomere during vegetative growth","type":"exact"},{"name":"abnormal protein localization to chromosome, telomeric region, during vegetative growth","type":"exact"},{"name":"abnormal protein localization to telomere during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003108"}


id: PBO:0003427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF1A-like (predicted)","termid":"PBO:0003427"}


id: PBO:0039832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine and glutamate rich 1","termid":"PBO:0039832"}


id: FYPO:0000342
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of cellular respiration is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular respiration","termid":"FYPO:0000078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased cellular respiration","synonyms":[{"name":"decreased cellular respiration during mitotic cell cycle","type":"related"},{"name":"decreased cellular respiration during vegetative growth","type":"exact"},{"name":"decreased respiration","type":"broad"},{"name":"decreased respiratory metabolism","type":"exact"},{"name":"reduced cellular respiration","type":"exact"},{"name":"respiratory metabolism: decreased","type":"related"}],"termid":"FYPO:0000342"}


id: GO:0075032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of symbiont germ tube hook structure formation.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"modulation of formation of symbiont germ tube hook structure for appressorium development","termid":"GO:0075030"},{"relation_name":"negatively_regulates","term_name":"formation of appressorium germ tube hook structure","termid":"GO:0075029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of formation of symbiont germ tube hook structure for appressorium development","synonyms":[{"name":"negative regulation of formation of symbiont germ tube hook structure on or near host","type":"exact"},{"name":"negative regulation of germ tube tip of symbiont on or near the exterior of host","type":"exact"},{"name":"negative regulation of symbiont germ tube hook structure formation on or near host","type":"related"}],"termid":"GO:0075032"}


id: MONDO:0037737
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, usually benign fibroblastic neoplasm that arises from the peritoneum. It is characterized by the presence of prominent hemangiopericytoma-like vessels.","definition_xrefs":["NCIT:C126357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peritoneal neoplasm","termid":"MONDO:0006901"},{"relation_name":"is_a","term_name":"solitary fibrous tumor","termid":"MONDO:0016238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peritoneal solitary fibrous tumor","secondary_identifiers":["UMLS:C4288403","MEDGEN:925935"],"synonyms":[{"name":"peritoneal solitary fibrous tumor","type":"exact"}],"termid":"MONDO:0037737","xrefs":{"Monarch":{"xref_id":"0037737"}}}


id: PBO:0073838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 14","termid":"PBO:0073838"}


id: GO:1902774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances from late endosome to lysosome.","definition_xrefs":["PMID:23949442","GO_REF:0000076","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal transport","termid":"GO:0007041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"late endosome to lysosome transport","synonyms":[{"name":"prevacuolar compartment to lysosome transport","type":"broad"}],"termid":"GO:1902774"}


id: GO:0008840
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + L-aspartate-4-semialdehyde = (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate + H2O.","definition_xrefs":["RHEA:34171","PMID:8993314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"4-hydroxy-tetrahydrodipicolinate synthase activity","secondary_identifiers":["KEGG_REACTION:R02292","MetaCyc:DIHYDRODIPICSYN-RXN","EC:4.3.3.7"],"synonyms":[{"name":"DHDPS activity","type":"related"},{"name":"L-aspartate-4-semialdehyde hydro-lyase (adding pyruvate and cyclizing)","type":"related"},{"name":"L-aspartate-4-semialdehyde hydro-lyase [adding pyruvate and cyclizing; (S)-2,3-dihydropyridine-2,6-dicarboxylate-forming]","type":"related"},{"name":"dihydrodipicolinate synthase activity","type":"exact"},{"name":"dihydrodipicolinate synthetase activity","type":"related"},{"name":"dihydrodipicolinic acid synthase activity","type":"related"}],"termid":"GO:0008840"}


id: PR:Q10481
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial import inner membrane translocase subunit Tim13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR19338:SF0","OMA:SCHPO01858","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.09c","secondary_identifiers":["UniProtKB:Q10481"],"synonyms":[{"name":"Spom972h-TIMM13","type":"exact"}],"termid":"PR:Q10481"}


id: PBO:0070326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 15","termid":"PBO:0070326"}


id: PBO:0085004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of eIF2 kinase Gcn2p; competes with Gcn2p for binding to Gcn1p; may contribute to regulation of translation in response to starvation via regulation of Gcn2p; binds to monomeric actin and to ribosomes and polyribosomes; ortholog of mammalian IMPACT","termid":"PBO:0085004"}


id: PBO:0087717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; required for basal RNA polymerase II transcription; homozygosity of the human MED17 L371P mutation is associated with infantile cerebral and cerebellar atrophy with poor myelination","termid":"PBO:0087717"}


id: PBO:0074814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 15A","termid":"PBO:0074814"}


id: RO:0002410
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"This relation groups causal relations between material entities and causal relations between processes","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_dependence_to","termid":"RO:0002609"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_related_to","termid":"RO:0002410"}


id: MONDO:0016010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A teratogenic disorder observed in a newborn or child of a mother who was exposed to warfarin during pregnancy. Manifestations include nasal bridge depression, nasal bones hypoplasia, microcephaly, congenital heart disorders, and brachydactyly.","definition_xrefs":["NCIT:C98906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin K-antagonist embryofetopathy","secondary_identifiers":["MESH:C536683","MedDRA:10051445","MEDGEN:75570","icd11.foundation:71579696","ICD9:759.89","SCTID:38323006","Orphanet:1914","UMLS:C0265374"],"synonyms":[{"name":"DiSala syndrome","type":"related"},{"name":"congenital warfarin syndrome","type":"related"},{"name":"coumarin embryopathy","type":"related"},{"name":"coumarin syndrome","type":"related"},{"name":"di Sala syndrome","type":"exact"},{"name":"embryofetopathy due to oral anticoagulant therapy","type":"related"},{"name":"fetal Coumadin syndrome","type":"exact"},{"name":"fetal anticoagulant syndrome","type":"related"},{"name":"fetal warfarin syndrome","type":"exact"},{"name":"foetal Coumadin syndrome","type":"exact"},{"name":"foetal anticoagulant syndrome","type":"related"},{"name":"foetal warfarin syndrome","type":"exact"},{"name":"vitamin K antagonist embryofetopathy","type":"related"},{"name":"vitamin K antagonist embryopathy","type":"exact"},{"name":"vitamin K antagonists embryofetopathy","type":"related"},{"name":"vitamin K-antagonist embryofetopathy","type":"exact"},{"name":"vitamin K-antagonist embryopathy","type":"exact"},{"name":"warfarin embryofetopathy","type":"exact"},{"name":"warfarin embryopathy","type":"exact"},{"name":"warfarin syndrome","type":"related"}],"termid":"MONDO:0016010","xrefs":{"Monarch":{"xref_id":"0016010"}}}


id: GO:0046814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a virion attaches to a host cell by binding to a co-receptor on the host cell surface.","definition_xrefs":["ISBN:0879694971"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion attachment to host cell","termid":"GO:0019062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"coreceptor-mediated virion attachment to host cell","synonyms":[{"name":"virion attachment, binding of host cell surface coreceptor","type":"exact"}],"termid":"GO:0046814"}


id: GO:0015123
data:
  {"annotated_genes":["SJAG_01505"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98201],"is_not":false,"summary":null,"term":"GO:0015123"}]},"cv_name":"molecular_function","definition":"Enables the transfer of acetate from one side of a membrane to the other. Acetate is the 2-carbon carboxylic acid ethanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01505":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"acetate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015123","terms_by_termid":{"GO:0015123":null}}


id: PBO:0085535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S6, no bacterial homolog; phosphorylated on S233 by Ypk3p in a TORC1-dependent manner, and on S232 in a TORC1/2-dependent manner by Ypk1/2/3p; RPS6A has a paralog, RPS6B, that arose from the whole genome duplication","termid":"PBO:0085535"}


id: MONDO:0011604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spondylo-ocular syndrome is a very rare association of spinal and ocular manifestations that is characterized by dense cataracts, and retinal detachment along with generalized osteoporosis and platyspondyly. Mild craniofacial dysphormism has been reported including short neck, large head and prominent eyebrows.","definition_xrefs":["Orphanet:85194"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"congenital vitreoretinal dysplasia","termid":"MONDO:0020247"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"},{"relation_name":"is_a","term_name":"linkeropathy","termid":"MONDO:1040022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005328","MONDO:0005497"],"is_obsolete":false,"name":"spondylo-ocular syndrome","secondary_identifiers":["UMLS:C4225412","OMIM:605822","MEDGEN:900371","GARD:16740","icd11.foundation:1611450426","SCTID:715653007"],"synonyms":[{"name":"SOS","type":"related"},{"name":"spondyloocular syndrome","type":"related"}],"termid":"MONDO:0011604","xrefs":{"Monarch":{"xref_id":"0011604"}}}


id: GO:0008088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of organelles or molecules along microtubules in neuron projections.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport along microtubule","termid":"GO:0010970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"axo-dendritic transport","secondary_identifiers":["Wikipedia:Axoplasmic_transport"],"synonyms":[{"name":"axon cargo transport","type":"narrow"},{"name":"axonal transport","type":"narrow"},{"name":"axoplasmic transport","type":"narrow"}],"termid":"GO:0008088"}


id: GO:0033075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isoquinoline alkaloids, alkaloid compounds that contain bicyclic N-containing aromatic rings and are derived from a 3,4-dihydroxytyramine (dopamine) precursor that undergoes a Schiff base addition with aldehydes of different origin.","definition_xrefs":["PMID:26503307","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid biosynthetic process","termid":"GO:0009821"},{"relation_name":"is_a","term_name":"isoquinoline alkaloid metabolic process","termid":"GO:0033076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"isoquinoline alkaloid biosynthetic process","synonyms":[{"name":"ipecac alkaloid biosynthesis","type":"related"},{"name":"isoquinoline alkaloid anabolism","type":"exact"},{"name":"isoquinoline alkaloid biosynthesis","type":"exact"},{"name":"isoquinoline alkaloid formation","type":"exact"},{"name":"isoquinoline alkaloid synthesis","type":"exact"}],"termid":"GO:0033075"}


id: PBO:0027465
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_wall_thickness_at_old_end_during_vegetative_growth","termid":"PBO:0027465"}


id: GO:1905143
data:
  {"annotated_genes":["SJAG_00353"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100600],"is_not":false,"summary":null,"term":"GO:1905143"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an eukaryotic translation initiation factor 2 complex.","definition_xrefs":["PMID:23775072","GOC:TermGenie","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00353":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"eIF-2 assembly","type":"exact"},{"name":"eIF-2 formation","type":"exact"},{"name":"eIF2 assembly","type":"exact"},{"name":"eIF2 formation","type":"exact"},{"name":"eukaryotic translation initiation factor 2 complex formation","type":"exact"}],"termid":"GO:1905143","terms_by_termid":{"GO:1905143":null}}


id: MONDO:0009193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial squamous dysplasia, keratinizing desquamative, of urinary tract","secondary_identifiers":["MEDGEN:384010","OMIM:226985","MESH:C565584","UMLS:C1856902"],"synonyms":[{"name":"epithelial squamous dysplasia, keratinizing desquamative, of urinary tract","type":"exact"}],"termid":"MONDO:0009193","xrefs":{"Monarch":{"xref_id":"0009193"}}}


id: GO:0047719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole + O2 = 2-formamidobenzaldehyde.","definition_xrefs":["RHEA:11212","EC:1.13.11.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"indole 2,3-dioxygenase activity","secondary_identifiers":["MetaCyc:INDOLE-23-DIOXYGENASE-RXN","KEGG_REACTION:R02338"],"synonyms":[{"name":"IDO","type":"related"},{"name":"indole oxidase activity","type":"related"},{"name":"indole-oxygen 2,3-oxidoreductase (decyclizing)","type":"related"},{"name":"indole:O2 oxidoreductase activity","type":"related"},{"name":"indole:oxygen 2,3-oxidoreductase (decyclizing)","type":"related"}],"termid":"GO:0047719"}


id: PBO:0086279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a potential role in pre-rRNA processing","termid":"PBO:0086279"}


id: MONDO:0032578
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complex cortical dysplasia with other brain malformations","termid":"MONDO:0000904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortical dysplasia, complex, with other brain malformations 9","secondary_identifiers":["MEDGEN:1648399","OMIM:618174","UMLS:C4748540"],"synonyms":[{"name":"CDCBM9","type":"related"},{"name":"CORTICAL DYSPLASIA, COMPLEX, WITH OTHER BRAIN MALFORMATIONS 9","type":"related"}],"termid":"MONDO:0032578","xrefs":{"Monarch":{"xref_id":"0032578"}}}


id: GO:0120105
data:
  {"annotated_genes":["SJAG_02392","SJAG_03379","SJAG_00807","SJAG_01889","SJAG_02831","SJAG_03631","SJAG_03564","SJAG_00845","SJAG_03704","SJAG_03625","SJAG_03145","SJAG_01787","SJAG_00082","SJAG_00268","SJAG_03703","SJAG_02278","SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87748,89461,90247,93890,94420,95331,95806,96690,100429,103196,105693,108547,110287,111792,112849,117374,117391],"is_not":false,"summary":null,"term":"GO:0120105"}]},"cv_name":"cellular_component","definition":"The region of the mitotic actomyosin ring in between the proximal layer and the actin filament layer. This region contains the accessory protein network, some actin filaments and connections between the proximal layer and the actin filament layer.","definition_xrefs":["GOC:vw","PMID:28914606","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitotic actomyosin contractile ring","termid":"GO:0110085"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00268":null,"SJAG_00807":null,"SJAG_00845":null,"SJAG_01787":null,"SJAG_01889":null,"SJAG_02278":null,"SJAG_02392":null,"SJAG_02831":null,"SJAG_03145":null,"SJAG_03379":null,"SJAG_03564":null,"SJAG_03625":null,"SJAG_03631":null,"SJAG_03703":null,"SJAG_03704":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0070938"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0070938","GO:0015629","GO:0005938","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"mitotic actomyosin contractile ring, intermediate layer","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actomyosin contractile ring, intermediate layer","type":"exact"}],"termid":"GO:0120105","terms_by_termid":{"GO:0120105":null}}


id: MONDO:0008013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Monosomy 9p is a rare chromosomal anomaly characterized by psychomotor developmental delay, facial dysmorphism (trigonocephaly, midface hypoplasia, upslanting palpebral fissures, dysplastic small ears, flat nasal bridge with anteverted nostrils and long philtrum, micrognathia, choanal atresia, short neck), single umbilical artery, omphalocele, inguinal or umbilical hernia, genital abnormalities (hypospadia, cryptorchidism), muscular hypotonia and scoliosis.","definition_xrefs":["Orphanet:261112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 9","termid":"MONDO:0016874"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 9p deletion syndrome","secondary_identifiers":["MEDGEN:167073","ICD9:758.39","MESH:C538024","GARD:3773","DOID:0060732","OMIM:158170","SCTID:62599000","UMLS:C0795830"],"synonyms":[{"name":"9p deletion","type":"exact"},{"name":"9p deletion syndrome","type":"exact"},{"name":"9p monosomy","type":"exact"},{"name":"9p syndrome","type":"exact"},{"name":"9p- syndrome","type":"exact"},{"name":"Alfi syndrome","type":"exact"},{"name":"chromosome 9p deletion","type":"exact"},{"name":"deletion 9p","type":"exact"},{"name":"monosomy 9p","type":"exact"},{"name":"monosomy 9p syndrome","type":"exact"},{"name":"monosomy type 9p","type":"exact"},{"name":"partial deletion of chromosome 9p","type":"exact"},{"name":"partial deletion of the short arm of chromosome 9","type":"exact"},{"name":"partial deletion of the short arm of chromosome type 9","type":"exact"},{"name":"partial monosomy 9p","type":"exact"},{"name":"partial monosomy of chromosome 9p","type":"exact"},{"name":"partial monosomy of the short arm of chromosome 9","type":"exact"}],"termid":"MONDO:0008013","xrefs":{"Monarch":{"xref_id":"0008013"}}}


id: GO:0001568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood.","definition_xrefs":["UBERON:0001981","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"vasculature development","termid":"GO:0001944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel development","termid":"GO:0001568"}


id: PBO:0052607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRAS proto-oncogene, GTPase pseudogene 1","termid":"PBO:0052607"}


id: GO:2001031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of cellular glucuronidation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cellular glucuronidation (obsolete GO:2001031)","synonyms":[{"name":"positive regulation of cellular glucuronide biosynthesis","type":"exact"},{"name":"positive regulation of cellular glucuronide biosynthetic process","type":"exact"},{"name":"positive regulation of cellular glucuronoside biosynthesis","type":"exact"},{"name":"positive regulation of cellular glucuronoside biosynthetic process","type":"exact"}],"termid":"GO:2001031"}


id: GO:0034026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + an L-amino acid + an L-amino acid = ADP + phosphate + L-aminoacyl-L-amino acid.","definition_xrefs":["EC:6.3.2.49"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"L-amino-acid alpha-ligase activity","secondary_identifiers":["MetaCyc:RXN-16296","RHEA:44332"],"synonyms":[{"name":"L-amino acid alpha-ligase activity","type":"exact"},{"name":"L-amino acid ligase activity","type":"exact"},{"name":"YwfE","type":"related"},{"name":"bacilysin synthetase activity","type":"exact"}],"termid":"GO:0034026"}


id: PBO:0056035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukotriene B4 receptor 2","termid":"PBO:0056035"}


id: GO:0034140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 3 signaling pathway.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 3 signaling pathway","termid":"GO:0034139"},{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039532"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 3 signaling pathway","termid":"GO:0034138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 3 signaling pathway","synonyms":[{"name":"negative regulation of TLR3 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 3 signalling pathway","type":"exact"}],"termid":"GO:0034140"}


id: GO:1902055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neosartoricin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie","PMID:23368997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of polyketide biosynthetic process","termid":"GO:1900734"},{"relation_name":"is_a","term_name":"regulation of neosartoricin biosynthetic process","termid":"GO:1902053"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"positively_regulates","term_name":"neosartoricin biosynthetic process","termid":"GO:1902050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of neosartoricin biosynthetic process","synonyms":[{"name":"activation of neosartoricin anabolism","type":"exact"},{"name":"activation of neosartoricin biosynthesis","type":"exact"},{"name":"activation of neosartoricin biosynthetic process","type":"narrow"},{"name":"activation of neosartoricin formation","type":"exact"},{"name":"activation of neosartoricin synthesis","type":"exact"},{"name":"positive regulation of neosartoricin anabolism","type":"exact"},{"name":"positive regulation of neosartoricin biosynthesis","type":"exact"},{"name":"positive regulation of neosartoricin formation","type":"exact"},{"name":"positive regulation of neosartoricin synthesis","type":"exact"},{"name":"up regulation of neosartoricin anabolism","type":"exact"},{"name":"up regulation of neosartoricin biosynthesis","type":"exact"},{"name":"up regulation of neosartoricin biosynthetic process","type":"exact"},{"name":"up regulation of neosartoricin formation","type":"exact"},{"name":"up regulation of neosartoricin synthesis","type":"exact"},{"name":"up-regulation of neosartoricin anabolism","type":"exact"},{"name":"up-regulation of neosartoricin biosynthesis","type":"exact"},{"name":"up-regulation of neosartoricin biosynthetic process","type":"exact"},{"name":"up-regulation of neosartoricin formation","type":"exact"},{"name":"up-regulation of neosartoricin synthesis","type":"exact"},{"name":"upregulation of neosartoricin anabolism","type":"exact"},{"name":"upregulation of neosartoricin biosynthesis","type":"exact"},{"name":"upregulation of neosartoricin biosynthetic process","type":"exact"},{"name":"upregulation of neosartoricin formation","type":"exact"},{"name":"upregulation of neosartoricin synthesis","type":"exact"}],"termid":"GO:1902055"}


id: PBO:0035826
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rate_of_actin_filament-based_movement","termid":"PBO:0035826"}


id: GO:0141197
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E)-4-hydroxy-3-methylbut-2-enyl diphosphate + 2 H+ + H2O + oxidized [flavodoxin] = 2-C-methyl-D-erythritol 2,4-cyclic diphosphate + reduced [flavodoxin].","definition_xrefs":["RHEA:43604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor","termid":"GO:0052592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-hydroxy-3-methylbut-2-enyl-diphosphate synthase activity (flavodoxin)","secondary_identifiers":["EC:1.17.7.3","MetaCyc:RXN-15878","KEGG_REACTION:R10859"],"synonyms":[{"name":"(E)-4-hydroxy-3-methylbut-2-enyl diphosphate synthase activity","type":"broad"},{"name":"4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity","type":"broad"}],"termid":"GO:0141197"}


id: PBO:0046010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 1 pseudogene 5","termid":"PBO:0046010"}


id: PBO:0005877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase 1 (predicted)","termid":"PBO:0005877"}


id: GO:0102968
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6E)-8-hydroxygeranial + NADP = (6E)-8-oxogeranial + NADPH + H+.","definition_xrefs":["RHEA:32611","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"10-hydroxygeranial oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN-9369"],"termid":"GO:0102968"}


id: GO:0005377
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular copper ion transporter (obsolete GO:0005377)","synonyms":[{"name":"intracellular copper ion transporter","type":"exact"},{"name":"intracellular copper transporter","type":"exact"}],"termid":"GO:0005377"}


id: GO:0160024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of Leydig cells, resulting in the expansion of a cell population. Leydig cells are interstitial cells located adjacent to the seminiferous tubules in the testis which produce testosterone.","definition_xrefs":["PMID:29632025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Leydig cell proliferation","termid":"GO:0160024"}


id: PR:O14126
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S protease regulatory subunit 6A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23073:SF7","OMA:SCHPO01437","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S protease regulatory subunit 6A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.12c","secondary_identifiers":["UniProtKB:O14126"],"synonyms":[{"name":"Spom972h-PSMC3","type":"exact"}],"termid":"PR:O14126"}


id: MOD:01429
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that forms an adduct with a (15)N labeled compound used as a reagent.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(15)N isotope tagged reagent","termid":"MOD:01429"}


id: MOD:00659
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to a methylated glutamine, either 2-methylated glutamine, N5-methylated glutamine, or methyl esterified deamidated glutamine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-glutamine residue","termid":"MOD:00907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated glutamine","synonyms":[{"name":"MeGln","type":"exact"}],"termid":"MOD:00659"}


id: PR:Q9UTL5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A zinc finger protein 710 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01932","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor IIIA (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.09c","secondary_identifiers":["UniProtKB:Q9UTL5"],"synonyms":[{"name":"Spom972h-ZNF710","type":"exact"},{"name":"TFIIIA (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTL5"}


id: PBO:0018157
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aspers-Huttenlocher Syndrome","termid":"PBO:0018157"}


id: GO:1900502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of butyryl-CoA catabolic process to butyrate.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of fatty acid biosynthetic process","termid":"GO:0045723"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"is_a","term_name":"positive regulation of lipid catabolic process","termid":"GO:0050996"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"regulation of butyryl-CoA catabolic process to butyrate","termid":"GO:1900500"},{"relation_name":"positively_regulates","term_name":"butyryl-CoA catabolic process to butyrate","termid":"GO:0044581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0044248","GO:0006790","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of butyryl-CoA catabolic process to butyrate","synonyms":[{"name":"activation of butyryl-CoA catabolic process to butyrate","type":"narrow"},{"name":"activation of butyryl-CoA catabolism to butyrate","type":"exact"},{"name":"positive regulation of butyryl-CoA catabolism to butyrate","type":"exact"},{"name":"up regulation of butyryl-CoA catabolic process to butyrate","type":"exact"},{"name":"up regulation of butyryl-CoA catabolism to butyrate","type":"exact"},{"name":"up-regulation of butyryl-CoA catabolic process to butyrate","type":"exact"},{"name":"up-regulation of butyryl-CoA catabolism to butyrate","type":"exact"},{"name":"upregulation of butyryl-CoA catabolic process to butyrate","type":"exact"},{"name":"upregulation of butyryl-CoA catabolism to butyrate","type":"exact"}],"termid":"GO:1900502"}


id: GO:0071211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of directing proteins towards the vacuole using signals contained within the protein, occurring as part of autophagy, the process in which cells digest parts of their own cytoplasm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein targeting to vacuole","termid":"GO:0006623"},{"relation_name":"part_of","term_name":"autophagy","termid":"GO:0006914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0006605"},{"rel_name":"part_of","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0006605","GO:0006914","GO:0008150"],"is_obsolete":false,"name":"protein targeting to vacuole involved in autophagy","synonyms":[{"name":"protein targeting to autophagosome","type":"related"}],"termid":"GO:0071211"}


id: PBO:0058049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4270","termid":"PBO:0058049"}


id: GO:0009529
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner and outer lipid bilayers of the plastid envelope.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle envelope lumen","termid":"GO:0031970"},{"relation_name":"part_of","term_name":"plastid envelope","termid":"GO:0009526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plastid intermembrane space","synonyms":[{"name":"plastid envelope lumen","type":"exact"}],"termid":"GO:0009529"}


id: PBO:0000755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human thyroid receptor interacting protein homolog, transcription coactivator (predicted)","termid":"PBO:0000755"}


id: GO:0030584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a sporocarp over time, from its formation to the mature structure. The sporocarp is a spore bearing fruiting body organ. An example of this process is found in the Fungal species Coprinopsis cinerea.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive fruiting body development","termid":"GO:0030582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sporocarp development","synonyms":[{"name":"fruiting body development","type":"broad"}],"termid":"GO:0030584"}


id: PBO:0000190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein","termid":"PBO:0000190"}


id: PBO:0031272
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-DNA_content_increased_during_vegetative_growth","termid":"PBO:0031272"}


id: PBO:0071902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 40","termid":"PBO:0071902"}


id: PBO:0109263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrograde transport protein, Golgi to ER, Erd1/Gmn2","termid":"PBO:0109263"}


id: PBO:0084207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homeobox transcription factor; regulatory targets include genes involved in phosphate metabolism; binds cooperatively with Pho4p to the PHO5 promoter; phosphorylation of Pho2p facilitates interaction with Pho4p; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0084207"}


id: PBO:0042024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 82","termid":"PBO:0042024"}


id: PBO:0051563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 12B","termid":"PBO:0051563"}


id: FYPO:0000044
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of transcription by glucose (glucose repression) is abnormal. For example, specific genes that are normally not transcribed in the presence of glucose may be transcribed in the mutant.","definition_xrefs":["GO:0045014","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of transcription during vegetative growth","termid":"FYPO:0000624"},{"relation_name":"is_a","term_name":"abnormal cellular response to nutrient","termid":"FYPO:0001484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000298","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"abnormal negative regulation of transcription by glucose","secondary_identifiers":["FYPO:0000210"],"synonyms":[{"name":"abnormal glucose repression","type":"exact"},{"name":"abnormal glucose repression during vegetative growth","type":"exact"},{"name":"abnormal negative regulation of transcription by glucose during mitotic cell cycle","type":"related"},{"name":"abnormal negative regulation of transcription by glucose during vegetative growth","type":"exact"},{"name":"glucose repression defects","type":"exact"},{"name":"glucose-insensitive transcription","type":"related"}],"termid":"FYPO:0000044"}


id: PBO:0066306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination signal binding protein for immunoglobulin kappa J region like","termid":"PBO:0066306"}


id: PBO:0072376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 2","termid":"PBO:0072376"}


id: PBO:0000714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endo-1,3-beta-glucanase Eng1","termid":"PBO:0000714"}


id: PBO:0054916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2330","termid":"PBO:0054916"}


id: PBO:0076654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 15","termid":"PBO:0076654"}


id: PBO:0076942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFPI2 divergent transcript","termid":"PBO:0076942"}


id: PBO:0113330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; deletion confers sensitivity to osmotic stress","termid":"PBO:0113330"}


id: PBO:0043691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 5A","termid":"PBO:0043691"}


id: PBO:0078608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 62","termid":"PBO:0078608"}


id: MONDO:0011075
data:
  {"annotated_genes":["SJAG_01634"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85618],"is_not":false,"summary":null,"term":"MONDO:0011075"}]},"cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the PRPF3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 18","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110356","ICD10CM:H35.5","MEDGEN:371314","GARD:10392","OMIM:601414","UMLS:C1832378","MESH:C563320"],"synonyms":[{"name":"PRPF3 retinitis pigmentosa","type":"exact"},{"name":"RP 18","type":"related"},{"name":"RP18","type":"exact"},{"name":"retinitis pigmentosa 18","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in PRPF3","type":"exact"},{"name":"retinitis pigmentosa type 18","type":"exact"}],"termid":"MONDO:0011075","terms_by_termid":{"MONDO:0011075":null},"xrefs":{"Monarch":{"xref_id":"0011075"}}}


id: PBO:0026892
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_phosphorylation_of_RNA_polymerase_II_C-terminal_domain_serine_2_residues_during_vegetative_growth","termid":"PBO:0026892"}


id: MONDO:0006174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenoma of the adrenal cortex that produces cortisol. It may be associated with Cushing syndrome. Clinical presentation includes weight gain, round face, easy bruising, muscle weakness, emotional changes, hirsutism, and hypertension.","definition_xrefs":["NCIT:C48449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal cortex adenoma","termid":"MONDO:0003924"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortisol-producing adrenal cortex adenoma","secondary_identifiers":["MEDGEN:353568","UMLS:C1707525","EFO:1000208"],"synonyms":[{"name":"cortisol producing adrenal cortex adenoma","type":"exact"},{"name":"cortisol producing adrenal cortical adenoma","type":"exact"},{"name":"cortisol-producing adrenal cortex adenoma","type":"exact"}],"termid":"MONDO:0006174","xrefs":{"Monarch":{"xref_id":"0006174"}}}


id: GO:0072219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric cortical collecting duct over time, from its formation to the mature structure. The metanephric cortical collecting duct is the portion of the metanephric collecting duct that resides in the renal cortex.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cortical collecting duct development","termid":"GO:0072059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric cortical collecting duct development","termid":"GO:0072219"}


id: GO:0021627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the olfactory nerve is generated and organized. The olfactory nerve is a collection of sensory nerve rootlets that extend down from the olfactory bulb to the olfactory mucosa of the upper parts of the nasal cavity. This nerve conducts odor information to the brainstem.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","ISBN:0838580343","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"olfactory nerve development","termid":"GO:0021553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory nerve morphogenesis","synonyms":[{"name":"CN I morphogenesis","type":"related"}],"termid":"GO:0021627"}


id: PATO:0002032
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A reflectivity quality inhering in light by virtue of the bearer's scattering occurring at small angle to the incident beam.","definition_xrefs":["PATOC:mc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation reflective quality","termid":"PATO:0001294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forward scatter","termid":"PATO:0002032"}


id: MONDO:0022752
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 16","termid":"MONDO:0016894"},{"relation_name":"is_a","term_name":"Rubinstein-Taybi syndrome","termid":"MONDO:0019188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0000426","MONDO:0002320"],"is_obsolete":false,"name":"chromosome 16p13.3 deletion syndrome","secondary_identifiers":["UMLS:C3502510","MEDGEN:502906","MESH:C566433"],"synonyms":[{"name":"RSTS, Severe","type":"related"},{"name":"Rubinstein-Taybi syndrome, Severe","type":"related"}],"termid":"MONDO:0022752","xrefs":{"Monarch":{"xref_id":"0022752"}}}


id: GO:0016508
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a medium-chain (3S)-3-hydroxyacyl-CoA = a medium-chain (2E)-enoyl-CoA + H2O. A long-chain acyl-CoA is an acyl-CoA thioester where the acyl chain contains 13 to 22 carbon atoms.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete long-chain-enoyl-CoA hydratase activity (obsolete GO:0016508)","termid":"GO:0016508"}


id: PBO:0110257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTREC associated protein Ctr1","termid":"PBO:0110257"}


id: GO:1905506
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any plastid stroma that is part of a gerontoplast.","definition_xrefs":["GOC:mag","GO_REF:0000064","PMID:11212360","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid stroma","termid":"GO:0009532"},{"relation_name":"part_of","term_name":"gerontoplast","termid":"GO:0034400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"gerontoplast stroma","termid":"GO:1905506"}


id: PBO:0053357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 261","termid":"PBO:0053357"}


id: MOD:00375
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 4,5-dihydroxy-L-lysine.","definition_xrefs":["RESID:AA0370","PubMed:12686488","Unimod:425#K","PubMed:10978343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated residue","termid":"MOD:00428"},{"relation_name":"is_a","term_name":"hydroxylated lysine","termid":"MOD:00681"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4,5-dihydroxy-L-lysine","synonyms":[{"name":"(2S,4Xi,5Xi)-2,6-diamino-4,5-dihydroxyhexanoic acid","type":"exact"},{"name":"4,5-dihydroxy-L-lysine","type":"exact"},{"name":"4,5-dihydroxylated L-lysine","type":"exact"},{"name":"45Hy2Lys","type":"exact"},{"name":"Dioxidation","type":"related"},{"name":"MOD_RES 4,5-dihydroxylysine","type":"exact"},{"name":"alpha,epsilon-diamino-delta,gamma-dihydroxycaproic acid","type":"exact"},{"name":"delta,gamma-dihydroxylysine","type":"exact"},{"name":"dihydroxy","type":"related"}],"termid":"MOD:00375"}


id: PBO:0088245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial (2Fe-2S) cluster assembly co-chaperone Jac1","termid":"PBO:0088245"}


id: MONDO:0010415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"reducing body myopathy","termid":"MONDO:0019948"},{"relation_name":"is_a","term_name":"FHL1-related myopathy","termid":"MONDO:0800462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy, reducing body, X-linked, childhood-onset","secondary_identifiers":["MEDGEN:904593","MESH:C567468","OMIM:300718","UMLS:C4225159","DOID:0080687","GARD:15262"],"synonyms":[{"name":"RBMX1B","type":"related"},{"name":"myopathy, reducing body, X-linked, childhood-onset","type":"exact"},{"name":"reducing body myopathy, X-linked 1B, with late childhood or adult onset","type":"related"}],"termid":"MONDO:0010415","xrefs":{"Monarch":{"xref_id":"0010415"}}}


id: PBO:0043838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnitine palmitoyltransferase 1C","termid":"PBO:0043838"}


id: PBO:0044769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 51","termid":"PBO:0044769"}


id: MONDO:0015999
data:
  {"annotated_genes":["SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014359"}]},"cv_name":"mondo","definition":"A form of bilateral adrenocortical hyperplasia that is often associated with adrenocorticotrophin hormone (ACTH) independent Cushing syndrome and is characterized by small to normal sized adrenal glands containing multiple small cortical pigmented nodules (less than 1 cm in diameter).","definition_xrefs":["Orphanet:189439"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ACTH-independent Cushing syndrome","termid":"MONDO:0020529"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04312":null},"genotype_count":0,"is_obsolete":false,"name":"primary pigmented nodular adrenocortical disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:2003695246","OMIMPS:610489","DOID:0060280","SCTID:719274008","MEDGEN:930501","GARD:10906","NCIT:C131196","UMLS:C4304832"],"synonyms":[{"name":"PPNAD","type":"exact"},{"name":"pigmented nodular adrenocortical disease","type":"exact"},{"name":"pigmented nodular adrenocortical disease, primary","type":"exact"},{"name":"primary pigmented nodular adrenal dysplasia","type":"exact"}],"termid":"MONDO:0015999","terms_by_termid":{"MONDO:0014359":null},"xrefs":{"Monarch":{"xref_id":"0015999"}}}


id: PBO:0080876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yippee like 2","termid":"PBO:0080876"}


id: PBO:0084811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; mCherry fusion protein localizes to the vacuole","termid":"PBO:0084811"}


id: GO:0061160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the establishment of bipolar cell polarity that contributes to the shape of a cell.","definition_xrefs":["GOC:dph","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of bipolar cell polarity","termid":"GO:0061172"},{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:2000100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"regulation of establishment of bipolar cell polarity regulating cell shape","termid":"GO:0061160"}


id: PBO:0005753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S2 (predicted)","termid":"PBO:0005753"}


id: PBO:0070416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II associated protein 2","termid":"PBO:0070416"}


id: GO:1900129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of G-protein activated inward rectifier potassium channel activity.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of G-protein activated inward rectifier potassium channel activity (obsolete GO:1900129)","synonyms":[{"name":"activation of G protein activated inward rectifier potassium channel activity","type":"narrow"},{"name":"activation of G protein enhanced inward rectifier potassium channel activity","type":"narrow"},{"name":"activation of G-protein activated inward rectifier potassium channel activity","type":"narrow"},{"name":"activation of G-protein enhanced inward rectifier potassium channel activity","type":"narrow"},{"name":"activation of G-protein-activated inward rectifier potassium channel activity","type":"narrow"},{"name":"activation of G-protein-enhanced inward rectifier potassium channel activity","type":"narrow"},{"name":"positive regulation of G protein activated inward rectifier potassium channel activity","type":"exact"},{"name":"positive regulation of G protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"positive regulation of G-protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"positive regulation of G-protein-activated inward rectifier potassium channel activity","type":"exact"},{"name":"positive regulation of G-protein-enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"up regulation of G protein activated inward rectifier potassium channel activity","type":"exact"},{"name":"up regulation of G protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"up regulation of G-protein activated inward rectifier potassium channel activity","type":"exact"},{"name":"up regulation of G-protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"up regulation of G-protein-activated inward rectifier potassium channel activity","type":"exact"},{"name":"up regulation of G-protein-enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"up-regulation of G protein activated inward rectifier potassium channel activity","type":"exact"},{"name":"up-regulation of G protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"up-regulation of G-protein activated inward rectifier potassium channel activity","type":"exact"},{"name":"up-regulation of G-protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"up-regulation of G-protein-activated inward rectifier potassium channel activity","type":"exact"},{"name":"up-regulation of G-protein-enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"upregulation of G protein activated inward rectifier potassium channel activity","type":"exact"},{"name":"upregulation of G protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"upregulation of G-protein activated inward rectifier potassium channel activity","type":"exact"},{"name":"upregulation of G-protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"upregulation of G-protein-activated inward rectifier potassium channel activity","type":"exact"},{"name":"upregulation of G-protein-enhanced inward rectifier potassium channel activity","type":"exact"}],"termid":"GO:1900129"}


id: PBO:0028613
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_wall_biogenesis","termid":"PBO:0028613"}


id: PBO:0111801
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCHC type (zinc knuckle)","termid":"PBO:0111801"}


id: GO:0015335
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: Me2+(out) + H+(out) = Me2+(in) + H+(in), where Me2+ is Fe2+, Zn2+, Mn2+, Cu2+, Cd2+, Co2+, Ni2+ or Pb2+.","definition_xrefs":["TC:2.A.55.2.2","TC:2.A.55.2.1"],"gene_count":0,"genotype_count":0,"name":"obsolete heavy metal ion:hydrogen symporter activity (obsolete GO:0015335)","synonyms":[{"name":"heavy metal ion:hydrogen symporter activity","type":"exact"},{"name":"heavy metal ion:proton symporter activity","type":"exact"}],"termid":"GO:0015335"}


id: GO:1990877
data:
  {"annotated_genes":["SJAG_02231","SJAG_04910"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95584,106635],"is_not":false,"summary":null,"term":"GO:1990877"}]},"cv_name":"cellular_component","definition":"A heterodimeric complex that functions as a GTPase-Activating Protein (GAP) Complex for members of the Rag family of GTPases. In the budding yeast, this complex contains Lst4 and Lst7, while the orthologous mammalian complex contains follicular (FLCN) and either follicular interacting protein 1 (FNIP1) or FNIP2.","definition_xrefs":["PMID:24095279","PMID:26387955","PMID:34805795","GOC:rn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTPase activator complex","termid":"GO:1902773"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02231":null,"SJAG_04910":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"FNIP-folliculin RagC/D GAP","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"BFC complex","type":"exact"},{"name":"FLCN-FNIP1 complex","type":"exact"},{"name":"FLCN-FNIP2 complex","type":"exact"},{"name":"FNIP-Folliculin RagC/D GAP complex","type":"exact"},{"name":"Lst4-Lst7 complex","type":"exact"}],"termid":"GO:1990877","terms_by_termid":{"GO:1990877":null}}


id: PBO:0048282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GALNT16 and EXD2 antisense RNA 1","termid":"PBO:0048282"}


id: PBO:0091850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNA primary transcript (predicted)","termid":"PBO:0091850"}


id: GO:0006356
data:
  {"annotated_genes":["SJAG_01764","SJAG_03897","SJAG_02608","SJAG_05187","SJAG_03931","SJAG_01149"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107894],"is_not":false,"summary":null,"term":"GO:0006356"},{"annotations":[110060,116489,91531,106456,95484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045943"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transcription mediated by RNA polymerase I.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"regulates","term_name":"transcription by RNA polymerase I","termid":"GO:0006360"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01149":null,"SJAG_01764":null,"SJAG_02608":null,"SJAG_03897":null,"SJAG_03931":null,"SJAG_05187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0006355","GO:0010467"],"is_obsolete":false,"name":"regulation of transcription by RNA polymerase I","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of transcription from Pol I promoter","type":"exact"},{"name":"regulation of transcription from RNA polymerase I promoter","type":"exact"}],"termid":"GO:0006356","terms_by_termid":{"GO:0006356":null,"GO:0045943":null}}


id: MONDO:0013814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"podoconiosis, susceptibility to","secondary_identifiers":["UMLS:C3281245","MEDGEN:482875","OMIM:614590"],"synonyms":[{"name":"Nonfilarial elephantiasis of Lower legs, susceptibility to","type":"related"},{"name":"PDCOS","type":"exact"},{"name":"endemic Nonfilarial elephantiasis, susceptibility to","type":"related"},{"name":"lymphostatic verrucosis, susceptibility to","type":"related"},{"name":"podoconiosis, susceptibility to","type":"exact"}],"termid":"MONDO:0013814","xrefs":{"Monarch":{"xref_id":"0013814"}}}


id: MONDO:0032900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia and autistic features with or without hyperkinetic movements","secondary_identifiers":["MEDGEN:1684874","UMLS:C5231491","OMIM:618760"],"synonyms":[{"name":"NEDHAHM","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH HYPOTONIA AND AUTISTIC FEATURES WITH OR WITHOUT HYPERKINETIC MOVEMENTS","type":"related"}],"termid":"MONDO:0032900","xrefs":{"Monarch":{"xref_id":"0032900"}}}


id: PR:000044798
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell division control protein 42 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 42 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC110.03","synonyms":[{"name":"SPAC110.03","type":"related"},{"name":"Spom-cdc2","type":"exact"}],"termid":"PR:000044798"}


id: GO:0032347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of aldosterone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"is_a","term_name":"regulation of aldosterone metabolic process","termid":"GO:0032344"},{"relation_name":"is_a","term_name":"regulation of steroid hormone biosynthetic process","termid":"GO:0090030"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"aldosterone biosynthetic process","termid":"GO:0032342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"regulation of aldosterone biosynthetic process","termid":"GO:0032347"}


id: MONDO:0100183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A susceptibility or predisposition to radioulnar synostosis in which the cause of the disease is a mutation in the SMAD6 gene.","definition_xrefs":["MONDO:patterns/susceptibility_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radioulnar synostosis, nonsyndromic, susceptibility to","secondary_identifiers":["MEDGEN:1712799","OMIM:179300","UMLS:C5241445"],"termid":"MONDO:0100183","xrefs":{"Monarch":{"xref_id":"0100183"}}}


id: GO:0160039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a chloride ion by a channel that opens when the biogenic amine serotonin has been bound by the channel complex or one of its constituent parts. Serotonin (5-hydroxytryptamine) is a neurotransmitter and hormone found in vertebrates and invertebrates.","definition_xrefs":["PMID:11100728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride channel activity","termid":"GO:0005254"},{"relation_name":"is_a","term_name":"transmitter-gated monoatomic ion channel activity","termid":"GO:0022824"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic anion channel activity","termid":"GO:0099095"},{"relation_name":"is_a","term_name":"serotonin receptor activity","termid":"GO:0099589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0038023","GO:0005215"],"is_obsolete":false,"name":"serotonin-gated chloride channel activity","secondary_identifiers":["Wikipedia:Ligand-gated_ion_channel","TC:1.A.9"],"termid":"GO:0160039"}


id: SO:0000925
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An edit to insert a GU dinucleotide.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000925 insert_GU (obsolete SO:0000925)","synonyms":[{"name":"insert GU","type":"exact"}],"termid":"SO:0000925"}


id: PBO:0083242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; expression induced by iron-regulated transcriptional activator Aft2p","termid":"PBO:0083242"}


id: GO:1990159
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex consisting of the helicase loading complex DnaB-DnaC, replication restart proteins DnaT, PriA and PriC, and associated DNA. Involved in the restart of DNA replication after a stalled replication fork has been repaired.","definition_xrefs":["GOC:bhm","PMID:8663105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-primosome complex","termid":"GO:1990099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DnaB-DnaC-DnaT-PriA-PriC complex","synonyms":[{"name":"DnaB-DnaC-DnaT-PriA-PriC preprimosome","type":"exact"},{"name":"phi-X174-type preprimosome","type":"related"}],"termid":"GO:1990159"}


id: GO:1903823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Single strand break repair that takes place in a telomere.","definition_xrefs":["GO_REF:0000062","GOC:TermGenie","PMID:24374808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single strand break repair","termid":"GO:0000012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"telomere single strand break repair","synonyms":[{"name":"single strand break repair in telomere","type":"exact"},{"name":"telomere SSBR","type":"related"},{"name":"telomere single-strand break repair","type":"exact"},{"name":"telomeric single strand break repair","type":"exact"}],"termid":"GO:1903823"}


id: GO:0035361
data:
  {"annotated_genes":["SJAG_02837","SJAG_04142","SJAG_04971","SJAG_03728"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78876,96984,98872,110704],"is_not":false,"summary":null,"term":"GO:0035361"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex in which a cullin from the Cul8 subfamily and a RING domain protein form the catalytic core. In S. cerevisiae, Mms1p acts as the adaptor protein and substrate specificity is conferred by any of a number of different proteins.","definition_xrefs":["GOC:krc","PMID:20139071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cullin-RING ubiquitin ligase complex","termid":"GO:0031461"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02837":null,"SJAG_03728":null,"SJAG_04142":null,"SJAG_04971":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Cul8-RING ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0035361","terms_by_termid":{"GO:0035361":null}}


id: GO:0019638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 6-hydroxycineole (6-hydroxy-1,8-epoxy-p-menthane), a hydrocarbon with the formula C10H18O2.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpenoid metabolic process","termid":"GO:0016098"},{"relation_name":"is_a","term_name":"epoxide metabolic process","termid":"GO:0097176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"6-hydroxycineole metabolic process","synonyms":[{"name":"6-endo-hydroxycineole metabolic process","type":"exact"},{"name":"6-endo-hydroxycineole metabolism","type":"exact"},{"name":"6-hydroxycineole metabolism","type":"exact"},{"name":"hydroxycineol metabolic process","type":"exact"},{"name":"hydroxycineol metabolism","type":"exact"}],"termid":"GO:0019638"}


id: MONDO:0000028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epilepsy, hot water (obsolete MONDO:0000028)","termid":"MONDO:0000028","xrefs":{"Monarch":{"xref_id":"0000028"}}}


id: MONDO:0005915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A yeast infection usually manifested as a superficial skin infection. It may also present as a systemic infection in patients who are receiving total parenteral nutrition.","definition_xrefs":["NCIT:C82981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tinea infection","termid":"MONDO:0005982"},{"relation_name":"is_a","term_name":"exanthem","termid":"MONDO:0006547"},{"relation_name":"is_a","term_name":"superficial mycosis","termid":"MONDO:0024268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pityriasis versicolor","secondary_identifiers":["MEDGEN:11826","DOID:9060","MESH:D014010","ICD9:111.0","UMLS:C0040262","icd11.foundation:67108853","ICD10CM:B36.0","EFO:0007439","SCTID:56454009"],"synonyms":[{"name":"Malassezia furfur infection","type":"exact"},{"name":"infection by Pityrosporum furfur","type":"exact"},{"name":"infections, Malassezia furfur","type":"related"},{"name":"tinea flava","type":"related"},{"name":"tinea versicolor","type":"related"}],"termid":"MONDO:0005915","xrefs":{"Monarch":{"xref_id":"0005915"}}}


id: GO:0047431
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-hydroxy-6-methylpyridine-3,4-dicarboxylate + H+ = 5-hydroxy-6-methylpyridine-3-carboxylate + CO2.","definition_xrefs":["EC:4.1.1.51","RHEA:13669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"3-hydroxy-2-methylpyridine-4,5-dicarboxylate 4-decarboxylase activity","secondary_identifiers":["MetaCyc:4.1.1.51-RXN","KEGG_REACTION:R03461"],"synonyms":[{"name":"3-hydroxy-2-methylpyridine-4,5-dicarboxylate 4-carboxy-lyase (3-hydroxy-2-methylpyridine-5-carboxylate-forming)","type":"related"},{"name":"3-hydroxy-2-methylpyridine-4,5-dicarboxylate 4-carboxy-lyase activity","type":"related"}],"termid":"GO:0047431"}


id: MOD:00752
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with ADP-ribose through formation of a glycosidic bond.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide or nucleic acid modified residue","termid":"MOD:00701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","synonyms":[{"name":"ADP-rybosylation (from NAD)","type":"exact"},{"name":"ADPRibRes","type":"exact"}],"termid":"MOD:00752"}


id: PBO:0001270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAK-related GC kinase Sid1","termid":"PBO:0001270"}


id: PBO:0017549
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FaScilin domain Containing","termid":"PBO:0017549"}


id: PATO:0002187
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Polar polarity is a quality that inheres in a molecular entity when the molecular entity is polar, i.e. does possess an electric dipole.","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polarity","termid":"PATO:0002186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polar polarity","termid":"PATO:0002187"}


id: MONDO:0800478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by an uncommon and relatively unknown cause of facial ulceration that occurs after damage to the trigeminal nerve. It characteristically involves non-healing facial ulceration(s) with accompanying anesthesia, paresthesia, and dysesthesia along the distribution of a trigeminal dermatome.","definition_xrefs":["PMID:37089852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trigeminal trophic syndrome","secondary_identifiers":["Orphanet:664901","MEDGEN:698241","UMLS:C1274928","icd11.foundation:983392135"],"synonyms":[{"name":"TTS","type":"exact"}],"termid":"MONDO:0800478","xrefs":{"Monarch":{"xref_id":"0800478"}}}


id: PBO:0040417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit c pseudogene 2","termid":"PBO:0040417"}


id: GO:0160107
data:
  {"annotated_genes":["SJAG_02386","SJAG_02637"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100469,111642],"is_not":false,"summary":null,"term":"GO:0160107"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine(58) in tRNA + S-adenosyl-L-methionine = H+ + N(1)-methyladenosine(58) in tRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (adenine) methyltransferase activity","termid":"GO:0016426"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02386":null,"SJAG_02637":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741","GO:0140098","GO:0140101"],"is_obsolete":false,"name":"tRNA (adenine(58)-N1)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6787525","RHEA:43152","Reactome:R-HSA-6783492"],"synonyms":[{"name":"tRNA (adenine(58)-N(1))-methyltransferase activity","type":"exact"},{"name":"tRNA (m(1)A(58)) methyltransferase","type":"exact"},{"name":"tRNA m(1)A(58) methyltransferase","type":"exact"}],"termid":"GO:0160107","terms_by_termid":{"GO:0160107":null}}


id: MONDO:0013177
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital muscular dystrophy with integrin alpha-7 deficiency is a rare, genetic, congenital muscular dystrophy due to extracellular matrix protein anomaly characterized by early motor development delay and muscle weakness with mild elevation of serum creatine kinase, that may be followed by progressive disease course with predominantly proximal muscle weakness and atrophy, motor development regress, scoliosis and respiratory insufficiency.","definition_xrefs":["Orphanet:34520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"congenital muscular dystrophy due to integrin alpha-7 deficiency","secondary_identifiers":["MESH:C567709","OMIM:613204","UMLS:C2750786","DOID:0110639","MEDGEN:413044","GARD:12587"],"synonyms":[{"name":"ITGA7 congenital muscular dystrophy","type":"exact"},{"name":"congenital muscular dystrophy caused by mutation in ITGA7","type":"exact"},{"name":"congenital muscular dystrophy with ITGA7 deficiency","type":"exact"},{"name":"congenital muscular dystrophy with integrin alpha-7 deficiency","type":"exact"},{"name":"congenital myopathy due to integrin alpha-7 deficiency","type":"exact"},{"name":"muscular dystrophy, congenital, due to ITGA7 deficiency","type":"related"},{"name":"muscular dystrophy, congenital, due to integrin ALPHA-7 deficiency","type":"related"},{"name":"myopathy, congenital, due to integrin Alpha-7 deficiency","type":"related"}],"termid":"MONDO:0013177","xrefs":{"Monarch":{"xref_id":"0013177"}}}


id: PBO:0109454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHX8 antisense RNA 1","termid":"PBO:0109454"}


id: GO:0017080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of a sodium channel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ion channel regulator activity","termid":"GO:0099106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674"],"is_obsolete":false,"name":"sodium channel regulator activity","termid":"GO:0017080"}


id: MONDO:0009660
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal recessive lysosomal storage disease caused by deficiency of the enzyme beta galactosidase. It is characterized by skeletal dysplasia and short stature.","definition_xrefs":["NCIT:C84902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis type 4","termid":"MONDO:0018938"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0002561"],"is_obsolete":false,"name":"mucopolysaccharidosis type 4B","secondary_identifiers":["SCTID:238044004","UMLS:C0086652","NANDO:1200107","DOID:0111392","OMIM:253010","GARD:3786","MEDGEN:43376","Orphanet:309310","NANDO:2201179","icd11.foundation:1479415032"],"synonyms":[{"name":"Beta-D-galactosidase deficiency","type":"exact"},{"name":"MPS 4B","type":"exact"},{"name":"MPS IV B","type":"exact"},{"name":"MPS IVB","type":"related"},{"name":"MPS4B","type":"exact"},{"name":"MPSIVB","type":"exact"},{"name":"Morquio disease type B","type":"exact"},{"name":"Morquio syndrome B","type":"exact"},{"name":"mucopolysaccharidosis type IVB","type":"exact"},{"name":"mucopolysaccharidosis type IVB (Morquio)","type":"exact"},{"name":"mucopolysaccharidosis, type 4B","type":"related"},{"name":"mucopolysaccharidosis, type IVB","type":"related"}],"termid":"MONDO:0009660","xrefs":{"Monarch":{"xref_id":"0009660"}}}


id: PBO:0047235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 230 member G","termid":"PBO:0047235"}


id: GO:0019769
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with low affinity with an immunoglobulin of the IgE isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:add","GOC:signaling","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgE receptor activity","termid":"GO:0019767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"low-affinity IgE receptor activity","synonyms":[{"name":"low affinity Fc receptor activity","type":"related"},{"name":"low affinity IgE receptor activity","type":"exact"}],"termid":"GO:0019769"}


id: PBO:0109226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spore wall alpha-1,3-glucan synthase Mok12","termid":"PBO:0109226"}


id: PBO:0087291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Silenced copy of ALPHA2 at HML; homeobox-domain protein that associates with Mcm1p in haploid cells to repress a-specific gene expression and interacts with a1p in diploid cells to repress haploid-specific gene expression","termid":"PBO:0087291"}


id: PBO:0081611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 536","termid":"PBO:0081611"}


id: PBO:0069934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1227, pseudogene","termid":"PBO:0069934"}


id: MONDO:0018428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial monosomy of the long arm of chromosome 9","termid":"MONDO:0016908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"9q31.1q31.3 microdeletion syndrome","secondary_identifiers":["GARD:21705","MEDGEN:1665719","Orphanet:401923","UMLS:C4750910"],"synonyms":[{"name":"Del(9)(q31.1q31.3)","type":"exact"},{"name":"monosomy 9q31.1q31.3","type":"exact"}],"termid":"MONDO:0018428","xrefs":{"Monarch":{"xref_id":"0018428"}}}


id: FYPO:0000959
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing sodium dodecyl sulfate (SDS.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002058","FYPO:0002060","FYPO:0000257","FYPO:0002057","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on sodium dodecyl sulfate","synonyms":[{"name":"normal cell population growth in presence of sodium dodecyl sulfate","type":"exact"},{"name":"normal cell population growth on SDS","type":"exact"},{"name":"normal cell population growth on sodium dodecyl sulfate","type":"exact"},{"name":"normal cellular response to sodium dodecyl sulfate","type":"related"},{"name":"normal growth on sodium dodecyl sulphate","type":"exact"},{"name":"normal vegetative cell population growth on sodium dodecyl sulfate","type":"exact"}],"termid":"FYPO:0000959"}


id: FYPO:0005966
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of potassium ions into a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal potassium import","synonyms":[{"name":"abnormal cellular potassium import","type":"exact"},{"name":"abnormal potassium import across plasma membrane","type":"exact"},{"name":"abnormal potassium import during mitotic cell cycle","type":"related"},{"name":"abnormal potassium import during vegetative growth","type":"exact"},{"name":"abnormal potassium import into cell","type":"exact"},{"name":"abnormal potassium ion import","type":"exact"}],"termid":"FYPO:0005966"}


id: MONDO:0005334
data:
  {"annotated_genes":["SJAG_03994"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013898"}]},"cv_name":"mondo","definition":"A group of inherited conditions characterized initially by hematuria and slowly progressing to renal insufficiency. The most common form is the Alport syndrome (hereditary nephritis with hearing loss) which is caused by mutations in genes for type IV collagen and defective glomerular basement membrane.","definition_xrefs":["EFO:0004128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephritis","termid":"MONDO:0001166"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03994":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"hereditary nephritis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D009394","MEDGEN:10305","UMLS:C0027706","SCTID:399340005"],"synonyms":[{"name":"familial nephritis","type":"related"},{"name":"hereditary nephritis","type":"exact"},{"name":"nephritis, familial","type":"related"}],"termid":"MONDO:0005334","terms_by_termid":{"MONDO:0013898":null},"xrefs":{"Monarch":{"xref_id":"0005334"}}}


id: MONDO:0859176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with motor and speech delay and behavioral abnormalities","secondary_identifiers":["OMIM:619470","MEDGEN:1794164","UMLS:C5561954"],"termid":"MONDO:0859176","xrefs":{"Monarch":{"xref_id":"0859176"}}}


id: PR:O42911
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsm25 gene.","definition_xrefs":["UniProtKB:O42911","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S25, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.04","synonyms":[{"name":"Spom972h-rsm25","type":"exact"}],"termid":"PR:O42911"}


id: PBO:0051835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon regulatory factor 9","termid":"PBO:0051835"}


id: GO:0047024
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-alpha-androstane-3-beta,17-beta-diol + NADP+ = 17-beta-hydroxy-5-alpha-androstan-3-one + H+ + NADPH.","definition_xrefs":["RHEA:16297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"5-alpha-androstane-3-beta,17-beta-diol dehydrogenase (NADP+) activity","secondary_identifiers":["EC:1.1.1.210","KEGG_REACTION:R04344","MetaCyc:1.1.1.210-RXN"],"synonyms":[{"name":"3-beta(or 20-alpha)-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"3-beta-HSD activity","type":"related"},{"name":"3beta(or 20alpha)-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"3beta(or 20alpha)-hydroxysteroid:NADP+ oxidoreductase activity","type":"broad"},{"name":"3beta,20alpha-hydroxysteroid oxidoreductase activity","type":"broad"},{"name":"5alpha-androstane-3beta,17beta-diol dehydrogenase activity","type":"exact"},{"name":"dehydrogenase, 3beta,20alpha-hydroxy steroid","type":"broad"},{"name":"progesterone reductase activity","type":"related"}],"termid":"GO:0047024"}


id: PBO:0108605
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_characteristic","termid":"PBO:0108605"}


id: MONDO:1010026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Budd-Chiari syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"},{"relation_name":"is_a","term_name":"liver disorder, non-human animal","termid":"MONDO:1012967"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Budd-Chiari syndrome, non-human animal","secondary_identifiers":["OMIA:001203"],"termid":"MONDO:1010026","xrefs":{"Monarch":{"xref_id":"1010026"}}}


id: GO:2000745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of transcription from RNA polymerase III promoter that is involved in smooth muscle cell differentiation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase III promoter involved in smooth muscle cell differentiation (obsolete GO:2000745)","synonyms":[{"name":"activation of transcription from RNA polymerase III promoter of nonstriated muscle cell differentiation","type":"related"},{"name":"activation of transcription from RNA polymerase III promoter of smooth muscle cell differentiation","type":"related"},{"name":"positive regulation of transcription from Pol III promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"positive regulation of transcription from Pol III promoter of smooth muscle cell differentiation","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase III promoter involved in smooth muscle cell differentiation","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase III promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase III promoter of smooth muscle cell differentiation","type":"exact"},{"name":"stimulation of transcription from RNA polymerase III promoter of nonstriated muscle cell differentiation","type":"related"},{"name":"stimulation of transcription from RNA polymerase III promoter of smooth muscle cell differentiation","type":"related"},{"name":"up regulation of transcription from RNA polymerase III promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"up regulation of transcription from RNA polymerase III promoter of smooth muscle cell differentiation","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase III promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase III promoter of smooth muscle cell differentiation","type":"exact"},{"name":"upregulation of transcription from RNA polymerase III promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"upregulation of transcription from RNA polymerase III promoter of smooth muscle cell differentiation","type":"exact"}],"termid":"GO:2000745"}


id: PBO:0113413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosome-associated protein; involved along with heterodimeric partner Tma20p in recycling of 40S ribosomal subunits; involved in nonsense-mediated mRNA decay (NMD); contains a putative RNA binding domain; localizes to the cytoplasm in HTP studies; similar to human GRAP and human DRP1, which interacts with human Tma20p homolog MCT-1; protein abundance increases in response to DNA replication stress","termid":"PBO:0113413"}


id: GO:0010120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of camalexin, an indole phytoalexin.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole phytoalexin biosynthetic process","termid":"GO:0009700"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"camalexin metabolic process","termid":"GO:0052317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0006790"],"is_obsolete":false,"name":"camalexin biosynthetic process","secondary_identifiers":["MetaCyc:CAMALEXIN-SYN"],"synonyms":[{"name":"camalexin anabolism","type":"exact"},{"name":"camalexin biosynthesis","type":"exact"},{"name":"camalexin formation","type":"exact"},{"name":"camalexin synthesis","type":"exact"}],"termid":"GO:0010120"}


id: PBO:0113131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exocyst subunit with dual roles in exocytosis and spliceosome assembly; subunit of the the exocyst complex which mediates polarized targeting and tethering of post-Golgi secretory vesicles to active sites of exocytosis at the plasma membrane (PM) prior to SNARE-mediated fusion; required for exocyst assembly and targeting of the complex to specific sites on the bud tip PM; associates the U1 snRNP; role in pre-mRNA splicing and prespliceosome formation; possible Cdc28 substrate","termid":"PBO:0113131"}


id: GO:0002571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of variable numbers of random nucleotides by terminal deoxytransferase in the N regions of T cell receptor genes. N regions are found at the V-D, D-D, V-J, and D-J recombinational junctions, depending on the T cell receptor gene.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of T cell receptor genes","termid":"GO:0002568"},{"relation_name":"is_a","term_name":"somatic diversification of immune receptors by N region addition","termid":"GO:0002569"},{"relation_name":"part_of","term_name":"somatic recombination of T cell receptor gene segments","termid":"GO:0002681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"somatic diversification of T cell receptor genes by N region addition","synonyms":[{"name":"somatic diversification of TCR genes by N region addition","type":"exact"}],"termid":"GO:0002571"}


id: FYPO:0002311
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of GMP binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal GMP binding","termid":"FYPO:0002310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased GMP binding","synonyms":[{"name":"reduced GMP binding","type":"exact"}],"termid":"FYPO:0002311"}


id: PBO:0087187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase subunit ABC10-beta; common to RNA polymerases I, II, and III","termid":"PBO:0087187"}


id: PBO:0030400
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_import","termid":"PBO:0030400"}


id: PBO:0004836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur ATPase involved in ribosome biogenesis Rli1 (predicted)","termid":"PBO:0004836"}


id: GO:2000606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell proliferation involved in mesonephros development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in kidney development","termid":"GO:1901722"},{"relation_name":"regulates","term_name":"cell proliferation involved in mesonephros development","termid":"GO:0061209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation involved in mesonephros development","termid":"GO:2000606"}


id: PBO:0076051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stathmin domain containing 1","termid":"PBO:0076051"}


id: PBO:0069771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1054, pseudogene","termid":"PBO:0069771"}


id: GO:0000486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Endonucleolytic cleavage between the 5.8S rRNA and the 2S rRNA of an rRNA molecule originally produced as a tetracistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, 2S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.","definition_xrefs":["PMID:768488","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000483"},{"relation_name":"part_of","term_name":"maturation of 2S rRNA","termid":"GO:0000475"},{"relation_name":"part_of","term_name":"maturation of 5.8S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0042254","GO:0010467"],"is_obsolete":false,"name":"cleavage between 5.8S rRNA and 2S rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000486"}


id: PBO:0004632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S4 (predicted)","termid":"PBO:0004632"}


id: PBO:0047528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYVE, RhoGEF and PH domain containing 2","termid":"PBO:0047528"}


id: GO:1904282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of antigen processing and presentation of endogenous peptide antigen via MHC class I.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24643698","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen via MHC class I","termid":"GO:0002589"},{"relation_name":"regulates","term_name":"antigen processing and presentation of endogenous peptide antigen via MHC class I","termid":"GO:0019885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation of endogenous peptide antigen via MHC class I","synonyms":[{"name":"regulation of antigen presentation, endogenous peptide antigen","type":"broad"},{"name":"regulation of antigen processing, endogenous antigen via MHC class I","type":"broad"},{"name":"regulation of antigen processing, endogenous antigen via major histocompatibility complex class I","type":"broad"},{"name":"regulation of endogenous peptide antigen processing and presentation via MHC class I","type":"exact"}],"termid":"GO:1904282"}


id: PBO:0041291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1s","termid":"PBO:0041291"}


id: PBO:0109193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi alpha-1,2-mannosyltransferase Omh3","termid":"PBO:0109193"}


id: GO:0071750
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two monomeric IgA immunoglobulin complexes linked through both direct disulfide bonds and through a disulfide binded monomer of J chain acting as a bridge. Each IgA monomer consists of two identical immunoglobulin heavy chains of an IgA isotype and two identical immunoglobulin light chains, held together by disulfide bonds. Dimeric IgA is sometimes complexed additionally with secretory component, and present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["ISBN:0781765196","GOC:add","PMID:16362985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polymeric IgA immunoglobulin complex","termid":"GO:0071749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005576"],"is_obsolete":false,"name":"dimeric IgA immunoglobulin complex","synonyms":[{"name":"dimeric IgA antibody","type":"exact"},{"name":"dimeric IgA1 antibody","type":"narrow"}],"termid":"GO:0071750"}


id: PBO:0084939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mucin family member that functions as an osmosensor in the HOG pathway; large, highly glycosylated protein that functions redundantly with Msb2p in Sho1p-mediated osmostresss induction of the HOG signaling pathway; cytoplasmic domain interacts with Ahk1p a scaffold protein that prevents cross talk with the Kss1p MAPK of the filamentous growth pathway; mutant displays defects in beta-1,3 glucan synthesis and bud site selection","termid":"PBO:0084939"}


id: PBO:0077066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THUMP domain containing 2","termid":"PBO:0077066"}


id: PBO:0058550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6129","termid":"PBO:0058550"}


id: PBO:0000871
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.2.2","termid":"PBO:0000871"}


id: PR:Q9HGQ2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trm401 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGQ2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multisite-specific tRNA:(cytosine-C(5))-methyltransferase trm4a (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17D4.04","synonyms":[{"name":"Spom972h-trm401","type":"exact"},{"name":"tRNA (cytosine-5-)-methyltransferase trm4a (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HGQ2"}


id: MONDO:0100496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare inherited muscular dystrophy characterized by the coexistence of limb-girdle weakness and early-onset diffuse joint contractures without cardiomyopathy.","definition_xrefs":["PMID:26581302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive titinopathy","termid":"MONDO:0100493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"Emery-Dreifuss-like muscular dystrophy","termid":"MONDO:0100496","xrefs":{"Monarch":{"xref_id":"0100496"}}}


id: FYPO:0000172
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A meiosis phenotype in which meiotic telomere clustering is abnormal. Meiotic telomere clustering is the dynamic reorganization of telomeres in early meiotic prophase, during which meiotic chromosome ends are gathered in a bouquet arrangement at the inner surface of the nuclear envelope proximal to the spindle pole body.","definition_xrefs":["GO:0045141","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome segregation","termid":"FYPO:0004159"},{"relation_name":"is_a","term_name":"localization phenotype during meiotic cell cycle","termid":"FYPO:0006393"},{"relation_name":"is_a","term_name":"abnormal meiotic chromosome organization","termid":"FYPO:0006759"},{"relation_name":"is_a","term_name":"abnormal telomere localization","termid":"FYPO:0007418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0000631","FYPO:0000641"],"is_obsolete":false,"name":"abnormal meiotic telomere clustering","synonyms":[{"name":"abnormal bouquet formation","type":"exact"}],"termid":"FYPO:0000172"}


id: MONDO:0004954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malt lymphoma (obsolete MONDO:0004954)","termid":"MONDO:0004954","xrefs":{"Monarch":{"xref_id":"0004954"}}}


id: PBO:0066844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 144","termid":"PBO:0066844"}


id: GO:0047927
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin 44 + 2-oxoglutarate + O2 = gibberellin 19 + succinate + CO2.","definition_xrefs":["PMID:32652020"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin-44 dioxygenase activity (obsolete GO:0047927)","termid":"GO:0047927"}


id: PBO:0069118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 367, pseudogene","termid":"PBO:0069118"}


id: PBO:0109617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAGE family member 2 (pseudogene)","termid":"PBO:0109617"}


id: PBO:0074561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 15","termid":"PBO:0074561"}


id: GO:1903669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of chemorepellent activity.","definition_xrefs":["GOC:TermGenie","PMID:24390142","GO_REF:0000059","PMID:22711818"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of chemorepellent activity (obsolete GO:1903669)","synonyms":[{"name":"activation of chemorepellant activity","type":"narrow"},{"name":"activation of chemorepellent activity","type":"narrow"},{"name":"positive regulation of chemorepellant activity","type":"exact"},{"name":"up regulation of chemorepellant activity","type":"exact"},{"name":"up regulation of chemorepellent activity","type":"exact"},{"name":"up-regulation of chemorepellant activity","type":"exact"},{"name":"up-regulation of chemorepellent activity","type":"exact"},{"name":"upregulation of chemorepellant activity","type":"exact"},{"name":"upregulation of chemorepellent activity","type":"exact"}],"termid":"GO:1903669"}


id: GO:1904981
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106081"}]},"cv_name":"biological_process","definition":"The process in which maltose is transported across a membrane.","definition_xrefs":["GOC:TermGenie","PMID:11136464","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maltose transport","termid":"GO:0015768"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"maltose transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1904981","terms_by_termid":{"GO:0106081":null}}


id: PBO:0048654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GJD3 antisense RNA 1","termid":"PBO:0048654"}


id: PBO:0053449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 397","termid":"PBO:0053449"}


id: PBO:0074859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 45C","termid":"PBO:0074859"}


id: PBO:0039723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B mRNA editing enzyme catalytic subunit 3D","termid":"PBO:0039723"}


id: PBO:0085172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oligopeptide transporter; localized to peroxisomes and affects glutathione redox homeostasis; also localizes to the plasma membrane (PM) and to the late Golgi, and has a role in maintenance of lipid asymmetry between the inner and outer leaflets of the PM; member of the OPT family, with potential orthologs in S. pombe and C. albicans; also plays a role in formation of mature vacuoles and in polarized cell growth","termid":"PBO:0085172"}


id: PBO:0081888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 839","termid":"PBO:0081888"}


id: FYPO:0006637
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex of one or both cell tips is decreased, and an increased amount of the protein is instead detected distributed throughout the cell cortex.","definition_xrefs":["PMID:29930085","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mislocalized protein distributed in cell cortex","termid":"FYPO:0006636"},{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"},{"relation_name":"is_a","term_name":"decreased protein localization to cell tip, with protein distributed in plasma membrane or cortex","termid":"FYPO:0003208"},{"relation_name":"is_a","term_name":"decreased protein localization to cell cortex of cell tip during vegetative growth","termid":"FYPO:0005798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to cell cortex of cell tip, with protein distributed in cortex","synonyms":[{"name":"decreased protein localisation to cell cortex of cell tip, with protein distributed in cortex during vegetative growth","type":"exact"},{"name":"decreased protein localization to cell cortex of cell end, with protein distributed in cortex during vegetative growth","type":"exact"},{"name":"decreased protein localization to cell cortex of cell tip, with protein distributed in cortex, during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to of cell tip cortex, with protein distributed in cortex","type":"exact"},{"name":"reduced protein localization to cell cortex of cell tip, with protein distributed in cortex during vegetative growth","type":"exact"}],"termid":"FYPO:0006637"}


id: PBO:0057953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3677","termid":"PBO:0057953"}


id: PBO:0053986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1303","termid":"PBO:0053986"}


id: _global:absent_during
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"Identifies a biological phase or process during which the modification is not observed, where it is not known whether the modification was removed during the indicated phase or process (if this is known use the removed_during relation), or during a preceding phase or process.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"absent_during","termid":"_global:absent_during"}


id: PBO:0043458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNNM3 divergent transcript","termid":"PBO:0043458"}


id: PBO:0050213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 30","termid":"PBO:0050213"}


id: PBO:0061768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine decarboxylase antizyme 3","termid":"PBO:0061768"}


id: MONDO:0026151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic acrokeratoderma (obsolete MONDO:0026151)","secondary_identifiers":["Orphanet:183441"],"termid":"MONDO:0026151","xrefs":{"Monarch":{"xref_id":"0026151"}}}


id: GO:1903522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of blood circulation.","definition_xrefs":["GOC:mr","PMID:10659969","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of system process","termid":"GO:0044057"},{"relation_name":"regulates","term_name":"blood circulation","termid":"GO:0008015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of blood circulation","synonyms":[{"name":"regulation of hemolymph circulation","type":"related"}],"termid":"GO:1903522"}


id: GO:0080004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a thalian-diol = a desaturated thalian-diol. This reaction is the introduction of a double bond to a thalian-diol molecule at carbon 15.","definition_xrefs":["PMID:18356490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"thalian-diol desaturase activity","secondary_identifiers":["MetaCyc:RXN-9637"],"termid":"GO:0080004"}


id: PBO:0027022
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_punctate_nuclear_protein_localization","termid":"PBO:0027022"}


id: PBO:0060150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translational release factor 1 like pseudogene 1","termid":"PBO:0060150"}


id: MONDO:0013541
data:
  {"annotated_genes":["SJAG_04003"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85442],"is_not":false,"summary":null,"term":"MONDO:0013541"}]},"cv_name":"mondo","definition":"Any complex cortical dysplasia with other brain malformations in which the cause of the disease is a mutation in the TUBB3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex cortical dysplasia with other brain malformations","termid":"MONDO:0000904"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04003":null},"genotype_count":0,"is_obsolete":false,"name":"complex cortical dysplasia with other brain malformations 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:300570","DOID:0090137","UMLS:C3808397","GARD:13032","MEDGEN:814727","OMIM:614039"],"synonyms":[{"name":"CDCBM1","type":"exact"},{"name":"TUBB3 complex cortical dysplasia with other brain malformations","type":"exact"},{"name":"complex cortical dysplasia with other brain malformations caused by mutation in TUBB3","type":"exact"},{"name":"complex cortical dysplasia with other brain malformations type 1","type":"exact"},{"name":"cortical dysgenesis with pontocerebellar hypoplasia due to TUBB3 mutation","type":"exact"},{"name":"cortical dysplasia, Complex, with Other brain malformations type 1","type":"exact"},{"name":"cortical dysplasia, complex, with other brain malformations 1","type":"related"}],"termid":"MONDO:0013541","terms_by_termid":{"MONDO:0013541":null},"xrefs":{"Monarch":{"xref_id":"0013541"}}}


id: FYPO:0003403
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glyoxalase III activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abnormal glyoxalase III activity","termid":"FYPO:0003403"}


id: MONDO:0010755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial vesicoureteral reflux","termid":"MONDO:0017329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicoureteral reflux, X-linked","secondary_identifiers":["UMLS:C1839114","MESH:C564042","MEDGEN:374134","OMIM:314550"],"synonyms":[{"name":"VURX","type":"related"},{"name":"vesicoureteral reflux, X-linked","type":"exact"}],"termid":"MONDO:0010755","xrefs":{"Monarch":{"xref_id":"0010755"}}}


id: PATO:0002387
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Extremely acute and aggressive onset of a pathological process.","definition_xrefs":["PATOC:PNS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute","termid":"PATO:0000389"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peracute","synonyms":[{"name":"per-acute","type":"exact"}],"termid":"PATO:0002387"}


id: PBO:0054174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1547","termid":"PBO:0054174"}


id: GO:1990747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of trypsinogen from the cells of the exocrine pancreas.","definition_xrefs":["PMID:12771515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"part_of","term_name":"pancreatic juice secretion","termid":"GO:0030157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"pancreatic trypsinogen secretion","synonyms":[{"name":"pancreatic trypsinogen release","type":"exact"}],"termid":"GO:1990747"}


id: GO:0031349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a defense response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"positively_regulates","term_name":"defense response","termid":"GO:0006952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of defense response","synonyms":[{"name":"activation of defense response","type":"narrow"},{"name":"stimulation of defense response","type":"narrow"},{"name":"up regulation of defense response","type":"exact"},{"name":"up-regulation of defense response","type":"exact"},{"name":"upregulation of defense response","type":"exact"}],"termid":"GO:0031349"}


id: PBO:0026643
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_kinetochore_during_mitotic_spindle_assembly_checkpoint_signaling","termid":"PBO:0026643"}


id: GO:0043463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of rhamnose, the hexose 6-deoxy-L-mannose.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"rhamnose catabolic process","termid":"GO:0019301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of rhamnose catabolic process","synonyms":[{"name":"regulation of rhamnose breakdown","type":"exact"},{"name":"regulation of rhamnose catabolism","type":"exact"},{"name":"regulation of rhamnose degradation","type":"exact"}],"termid":"GO:0043463"}


id: PBO:0027976
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K4_dimethylation_at_protein_coding_gene","termid":"PBO:0027976"}


id: PBO:0078000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAF3 interacting protein 1","termid":"PBO:0078000"}


id: PBO:0084005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycerophosphocholine (GroPCho) phosphodiesterase; hydrolyzes GroPCho to choline and glycerolphosphate, for use as a phosphate source and as a precursor for phosphocholine synthesis; may interact with ribosomes","termid":"PBO:0084005"}


id: PBO:0004942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V1 domain subunit G (predicted)","termid":"PBO:0004942"}


id: GO:0004322
data:
  {"annotated_genes":["SJAG_04677","SJAG_03862"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91939,113374],"is_not":false,"summary":null,"term":"GO:0004322"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 Fe2+ + 4 H+ + O2 = 4 Fe3+ + 2 H2O.","definition_xrefs":["RHEA:11148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on metal ions, oxygen as acceptor","termid":"GO:0016724"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03862":null,"SJAG_04677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"ferroxidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1562603","Reactome:R-HSA-5621402","MetaCyc:RXN0-1483","Reactome:R-HSA-1562604","Reactome:R-HSA-1562626","Reactome:R-HSA-5691107","Reactome:R-HSA-917891","Reactome:R-HSA-917933","EC:1.16.3.1"],"synonyms":[{"name":"Fe(II):oxygen oxidoreductase activity","type":"related"},{"name":"HEPH","type":"narrow"},{"name":"caeruloplasmin","type":"narrow"},{"name":"ceruloplasmin","type":"narrow"},{"name":"ferro:O2 oxidoreductase activity","type":"related"},{"name":"ferroxidase I","type":"related"},{"name":"ferroxidase, iron II:oxygen oxidoreductase activity","type":"related"},{"name":"hephaestin","type":"narrow"},{"name":"iron(II): oxygen oxidoreductase activity","type":"related"},{"name":"multicopper ferroxidase iron transport mediator activity","type":"narrow"}],"termid":"GO:0004322","terms_by_termid":{"GO:0004322":null}}


id: PBO:0039590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anoctamin 7 like 1 (pseudogene)","termid":"PBO:0039590"}


id: PR:Q8J1M7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC330.19c gene.","definition_xrefs":["UniProtKB:Q8J1M7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C330.19c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.19c","synonyms":[{"name":"Spom972h-SPCC330.19c","type":"exact"}],"termid":"PR:Q8J1M7"}


id: GO:0090187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of pancreatic juice secretion, the regulated release of pancreatic juice by the exocrine pancreas into the upper part of the intestine.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secretion","termid":"GO:0051047"},{"relation_name":"is_a","term_name":"positive regulation of digestive system process","termid":"GO:0060456"},{"relation_name":"is_a","term_name":"regulation of pancreatic juice secretion","termid":"GO:0090186"},{"relation_name":"positively_regulates","term_name":"pancreatic juice secretion","termid":"GO:0030157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of pancreatic juice secretion","termid":"GO:0090187"}


id: MONDO:0002083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Transformation of chronic lymphocytic leukemia into aggressive non-Hodgkin's lymphoma, usually diffuse large B-cell lymphoma (immunoblastic or centroblastic variant). Occasional cases of transformation to Hodgkin's lymphoma have also been described, particularly in patients treated with purine nucleotide analogs. Molecular genetic studies suggest that in approximately half of the cases, the lymphoma is clonally related to the underlying chronic lymphocytic leukemia, whereas in the remaining cases the lymphoma probably represents a secondary, unrelated neoplasm.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"B-cell chronic lymphocytic leukemia","termid":"MONDO:0004948"},{"relation_name":"is_a","term_name":"neoplastic syndrome","termid":"MONDO:0021058"},{"relation_name":"is_a","term_name":"secondary neoplasm","termid":"MONDO:0024882"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Richter syndrome","secondary_identifiers":["SCTID:277550009","UMLS:C0349631","NCIT:C35424","MEDGEN:91159","GARD:7578","icd11.foundation:1736108343","DOID:1703"],"synonyms":[{"name":"Richter syndrome","type":"exact"},{"name":"Richter transformation","type":"exact"},{"name":"Richter's syndrome","type":"exact"},{"name":"Richter's transformation","type":"exact"}],"termid":"MONDO:0002083","xrefs":{"Monarch":{"xref_id":"0002083"}}}


id: PBO:0071329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 6","termid":"PBO:0071329"}


id: MONDO:0100407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(11;15)(p15;q35). (A cytogenetic abnormality that refers to the translocation of chromosome 11p15 with chromosome 15q35. It results in the formation of NUP98/JARID1A fusion gene. It is associated with the development of acute myeloid leukemia with t(11;15)(p15;q35); NUP98-JARID1A.)","definition_xrefs":["NCIT:C131505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"acute myeloid leukemia, t(11;15)(p15;q35)","secondary_identifiers":["NCIT:C131504"],"synonyms":[{"name":"AML, t(11;15)(p15;q35)","type":"exact"}],"termid":"MONDO:0100407","xrefs":{"Monarch":{"xref_id":"0100407"}}}


id: PR:Q1MTR7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16H5.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q1MTR7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C16H5.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.14c","synonyms":[{"name":"Spom972h-SPBC16H5.14c","type":"exact"}],"termid":"PR:Q1MTR7"}


id: MONDO:1012061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dermatosis vegetans, non-human animal","termid":"MONDO:1011736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermatosis vegetans, pig","secondary_identifiers":["OMIA:000271-9823"],"termid":"MONDO:1012061","xrefs":{"Monarch":{"xref_id":"1012061"}}}


id: GO:0099512
data:
  {"annotated_genes":["SJAG_00930","SJAG_01837","SJAG_02431","SJAG_02566","SJAG_02761","SJAG_04841","SJAG_03145","SJAG_04387","SJAG_01224","SJAG_00332","SJAG_01546","SJAG_01330","SJAG_03073","SJAG_04887","SJAG_03264","SJAG_03052","SJAG_00845","SJAG_03088","SJAG_00030","SJAG_04745","SJAG_03540","SJAG_02045","SJAG_05024","SJAG_04003","SJAG_00655","SJAG_01215","SJAG_05266","SJAG_02336","SJAG_02695","SJAG_03703","SJAG_02624","SJAG_01297","SJAG_00773","SJAG_00140","SJAG_00113","SJAG_01613","SJAG_02509","SJAG_01196","SJAG_00723","SJAG_02286","SJAG_00918","SJAG_02040","SJAG_05220","SJAG_01775","SJAG_01993","SJAG_00851"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[108541,113809,94763,104631,101244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005884"},{"annotations":[111615,106700,98705,90856,103511,106909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000235"},{"annotations":[98112,100916,103380,107727,98706,90858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055028"},{"annotations":[94683,97061,103244],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903754"},{"annotations":[87256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097268"},{"annotations":[106701,99861,100917,98707,112250,90627,113530,106910,96458,94684,103246,118144,89093,117631,90859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005881"},{"annotations":[96763],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0062194"},{"annotations":[101819,103382,113531,96459,103247,99863,118145,89094],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904511"},{"annotations":[87227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990574"},{"annotations":[108332,96253,118916,111617,103039,88430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005874"},{"annotations":[103248,96461,113535],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990752"},{"annotations":[98711,99866],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036449"},{"annotations":[98713,88062,117635,90861,104141,118878],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035371"},{"annotations":[90862,103388,107733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061673"},{"annotations":[96462],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905721"},{"annotations":[106988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990941"},{"annotations":[100921,99868,105804,118151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990498"},{"annotations":[117637,98116,98716,106989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990537"},{"annotations":[97138,117376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032982"},{"annotations":[90865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005880"},{"annotations":[100924,94254,98718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005827"},{"annotations":[96463,100925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905759"},{"annotations":[90867],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905760"},{"annotations":[75189,113590,89221,106913,116161,96773,103197,111619,100016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005876"}]},"cv_name":"cellular_component","definition":"A polymer consisting of an indefinite number of protein or protein complex subunits that have polymerised to form a fiber-shaped structure.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supramolecular polymer","termid":"GO:0099081"}],"gene_count":46,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00113":null,"SJAG_00140":null,"SJAG_00332":null,"SJAG_00655":null,"SJAG_00723":null,"SJAG_00773":null,"SJAG_00845":null,"SJAG_00851":null,"SJAG_00918":null,"SJAG_00930":null,"SJAG_01196":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01775":null,"SJAG_01837":null,"SJAG_01993":null,"SJAG_02040":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02431":null,"SJAG_02509":null,"SJAG_02566":null,"SJAG_02624":null,"SJAG_02695":null,"SJAG_02761":null,"SJAG_03052":null,"SJAG_03073":null,"SJAG_03088":null,"SJAG_03145":null,"SJAG_03264":null,"SJAG_03540":null,"SJAG_03703":null,"SJAG_04003":null,"SJAG_04387":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_04887":null,"SJAG_05024":null,"SJAG_05220":null,"SJAG_05266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"supramolecular fiber","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21802294":null,"PMID:30726171":null},"secondary_identifiers":["GO:0043205"],"synonyms":[{"name":"fibril","type":"related"}],"termid":"GO:0099512","terms_by_termid":{"GO:0000235":null,"GO:0005827":null,"GO:0005874":null,"GO:0005876":null,"GO:0005880":null,"GO:0005881":null,"GO:0005884":null,"GO:0032982":null,"GO:0035371":null,"GO:0036449":null,"GO:0055028":null,"GO:0061673":null,"GO:0062194":null,"GO:0097268":null,"GO:1903754":null,"GO:1904511":null,"GO:1905721":null,"GO:1905759":null,"GO:1905760":null,"GO:1990498":null,"GO:1990537":null,"GO:1990574":null,"GO:1990752":null,"GO:1990941":null}}


id: PBO:0082291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arginine N5 methyltransferase; methylates ribosomal protein Rpl12 (L12) on Arg67; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0082291"}


id: PBO:0042771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 76","termid":"PBO:0042771"}


id: MONDO:0002026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection with the organism Candida.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opportunistic mycosis","termid":"MONDO:0002312"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidiasis","secondary_identifiers":["MEDGEN:14299","ICD10CM:B37","ICD9:112","MESH:D002177","ICD9:112.9","DOID:1508","ICD9:112.89","UMLS:C0006840","SCTID:78048006","NCIT:C26711"],"synonyms":[{"name":"Candida <Debaryomycetaceae> infection","type":"exact"},{"name":"Candida infection","type":"exact"},{"name":"Candidosis","type":"exact"},{"name":"disseminated candidiasis","type":"narrow"},{"name":"infections, Candida <Debaryomycetaceae>","type":"related"},{"name":"systemic candidiasis","type":"narrow"},{"name":"thrush","type":"exact"}],"termid":"MONDO:0002026","xrefs":{"Monarch":{"xref_id":"0002026"}}}


id: PBO:0089675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP1 catalytic subunit Sds21","termid":"PBO:0089675"}


id: PBO:0041844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAS1 domain containing 1","termid":"PBO:0041844"}


id: PBO:0081488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 384","termid":"PBO:0081488"}


id: PBO:0028665
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_replication_fork_processing","termid":"PBO:0028665"}


id: PBO:0083369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps verified gene GAL11; deletion confers sensitivity to 4-(N-(S-glutathionylacetyl)amino) phenylarsenoxide (GSAO)","termid":"PBO:0083369"}


id: GO:0046027
data:
  {"annotated_genes":["SJAG_03162"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111557],"is_not":false,"summary":null,"term":"GO:0046027"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: phospholipid + 1,2-diacylglycerol = lysophospholipid + triacylglycerol.","definition_xrefs":["EC:2.3.1.158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phospholipid:diacylglycerol acyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:2.3.1.158-RXN","RHEA:14057"],"synonyms":[{"name":"PDAT activity","type":"related"},{"name":"phospholipid:1,2-diacyl-sn-glycerol O-acyltransferase activity","type":"related"}],"termid":"GO:0046027","terms_by_termid":{"GO:0046027":null}}


id: MONDO:0030748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"junctional epidermolysis bullosa","termid":"MONDO:0017612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa, junctional 3A, intermediate","secondary_identifiers":["OMIM:619785","UMLS:C5676938","MEDGEN:1812940"],"synonyms":[{"name":"JEB3A","type":"exact"},{"name":"epidermolysis bullosa, junctional 3A, generalised intermediate","type":"exact"},{"name":"epidermolysis bullosa, junctional 3A, generalized intermediate","type":"exact"},{"name":"epidermolysis bullosa, junctional 3A, intermediate","type":"exact"},{"name":"epidermolysis bullosa, junctional 3A, non-herlitz IIA","type":"exact"}],"termid":"MONDO:0030748","xrefs":{"Monarch":{"xref_id":"0030748"}}}


id: FYPO:0003577
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the transport of a substance from the plasma membrane to the vacuole does not occur when the cell is subject to, or recovering from, nitrogen starvation. Transport normally occurs in two stages, plasma membrane to endosome followed by endosome to vacuole transport.","definition_xrefs":["PMID:22194353","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar transport","termid":"FYPO:0003578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished plasma membrane to vacuole transport after nitrogen starvation","synonyms":[{"name":"abolished plasma membrane to vacuole protein transport after nitrogen starvation","type":"narrow"}],"termid":"FYPO:0003577"}


id: GO:0061978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of mandibular joint condyle articular cartilage over time, from its formation to the mature structure.","definition_xrefs":["PMID:20679519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temporomandibular joint articular cartilage development","termid":"GO:0061976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mandibular condyle articular cartilage development","termid":"GO:0061978"}


id: MONDO:0006510
data:
  {"annotated_genes":["SJAG_01183","SJAG_04335","SJAG_00516","SJAG_03375"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011422"},{"annotations":[86530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010359"},{"annotations":[86163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013782"},{"annotations":[85626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011268"}]},"cv_name":"mondo","definition":"Genetic defects in the selective or non-selective transport functions of the kidney tubules.","definition_xrefs":["MESH:D015499"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00516":null,"SJAG_01183":null,"SJAG_03375":null,"SJAG_04335":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal tubular transport disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:19728","EFO:1000647","DOID:447","UMLS:C0035091"],"synonyms":[{"name":"disorder of renal absorption","type":"exact"},{"name":"inborn renal tubular transport disorder","type":"exact"},{"name":"kidney tubular transport, inborn error","type":"related"},{"name":"kidney tubular transport, inborn errors","type":"related"},{"name":"renal absorption disease","type":"exact"},{"name":"renal tubular transport errors","type":"related"},{"name":"renal tubular transport, inborn error","type":"related"}],"termid":"MONDO:0006510","terms_by_termid":{"MONDO:0010359":null,"MONDO:0011268":null,"MONDO:0011422":null,"MONDO:0013782":null},"xrefs":{"Monarch":{"xref_id":"0006510"}}}


id: PBO:0088932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylceramide biosynthesis protein Cwh43","termid":"PBO:0088932"}


id: MONDO:0019663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete short rib-polydactyly syndrome, Saldino-Noonan type (obsolete MONDO:0019663)","termid":"MONDO:0019663","xrefs":{"Monarch":{"xref_id":"0019663"}}}


id: MONDO:0035105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic multiple congenital anomalies/dysmorphic syndrome characterized by congenital diaphragmatic hernia, short bowel, and asplenia. Dysmorphic facial features include long forehead, hypertelorism, upturned nares, and small mandible. Atresia of the duodenum has also been reported.","definition_xrefs":["Orphanet:527468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diaphragmatic hernia-short bowel-asplenia syndrome","secondary_identifiers":["GARD:22193","MEDGEN:1811530","UMLS:C5681454"],"termid":"MONDO:0035105","xrefs":{"Monarch":{"xref_id":"0035105"}}}


