# terms

id: PBO:0076275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptonemal complex central element protein 3","termid":"PBO:0076275"}


id: GO:0004088
data:
  {"annotated_genes":["SJAG_00964","SJAG_00392","SJAG_00412"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92904,106012,110571],"is_not":false,"summary":null,"term":"GO:0004088"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 ATP + L-glutamine + CO2 + H2O = 2 ADP + phosphate + glutamate + carbamoyl phosphate.","definition_xrefs":["EC:6.3.5.5","RHEA:18633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00412":null,"SJAG_00964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-73577","MetaCyc:CARBPSYN-RXN"],"synonyms":[{"name":"CPS activity","type":"related"},{"name":"GD-CPSase activity","type":"related"},{"name":"carbamoyl phosphate synthase (glutamine-hydrolyzing) activity","type":"exact"},{"name":"carbamoyl phosphate synthetase activity","type":"related"},{"name":"carbamoyl-phosphate synthase (glutamine-hydrolysing) activity","type":"related"},{"name":"carbamoyl-phosphate synthetase (glutamine-hydrolysing) activity","type":"related"},{"name":"carbamoyl-phosphate synthetase (glutamine-hydrolyzing) activity","type":"related"},{"name":"carbamoylphosphate synthetase II activity","type":"related"},{"name":"carbamyl phosphate synthetase (glutamine) activity","type":"related"},{"name":"carbon-dioxide::L-glutamine amido-ligase (ADP-forming, carbamate-phosphorylating) activity","type":"related"},{"name":"glutamine-dependent carbamoyl-phosphate synthase activity","type":"related"},{"name":"glutamine-dependent carbamyl phosphate synthetase activity","type":"related"},{"name":"hydrogen-carbonate:L-glutamine amido-ligase (ADP-forming, carbamate-phosphorylating) activity","type":"related"}],"termid":"GO:0004088","terms_by_termid":{"GO:0004088":null}}


id: PBO:0030586
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_isoleucine_level","termid":"PBO:0030586"}


id: PBO:0058083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR4300 host gene","termid":"PBO:0058083"}


id: PBO:0066501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"raftlin family member 2","termid":"PBO:0066501"}


id: PBO:0066944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 246","termid":"PBO:0066944"}


id: MONDO:0032814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"COL4A1-related disorder","termid":"MONDO:0800461"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microangiopathy and leukoencephalopathy, pontine, autosomal dominant","secondary_identifiers":["OMIM:618564","UMLS:C5231411","MEDGEN:1684781","Orphanet:477749","GARD:17855"],"synonyms":[{"name":"Dementia, Hereditary Multi-Infarct, Swedish Type","type":"related"},{"name":"MICROANGIOPATHY AND LEUKOENCEPHALOPATHY, PONTINE, AUTOSOMAL DOMINANT","type":"exact"},{"name":"PADMAL","type":"exact"},{"name":"pontine autosomal dominant microangiopathy with leukoencephalopathy","type":"exact"}],"termid":"MONDO:0032814","xrefs":{"Monarch":{"xref_id":"0032814"}}}


id: PBO:0028005
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete_mitotic_sister_chromatid_segregation,_with_phi-shaped_DNA_mass","termid":"PBO:0028005"}


id: GO:0033389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane, from arginine via agmatine.","definition_xrefs":["GOC:mah","MetaCyc:PWY-40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"putrescine biosynthetic process from arginine","termid":"GO:0033388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"putrescine biosynthetic process from arginine, via agmatine","synonyms":[{"name":"putrescine anabolism from arginine, using agmatinase","type":"exact"},{"name":"putrescine biosynthesis from arginine, using agmatinase","type":"exact"},{"name":"putrescine biosynthetic process from arginine, using agmatinase","type":"exact"},{"name":"putrescine formation from arginine, using agmatinase","type":"exact"},{"name":"putrescine synthesis from arginine, using agmatinase","type":"exact"}],"termid":"GO:0033389"}


id: PBO:0084734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial integral inner membrane protein; involved in membrane insertion of C-terminus of Cox2p, interacts genetically and physically with Cox18p; deletion mutant sensitive to the anti-Pneumocystis carinii drug pentamidine","termid":"PBO:0084734"}


id: GO:0071699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the olfactory placode are generated and organized. The olfactory placode is a thickening of the neural ectoderm in the head region of the vertebrate embryo which develops into the olfactory region of the nasal cavity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"ectodermal placode morphogenesis","termid":"GO:0071697"},{"relation_name":"part_of","term_name":"olfactory placode development","termid":"GO:0071698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory placode morphogenesis","termid":"GO:0071699"}


id: PBO:0003002
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.14.12.17","termid":"PBO:0003002"}


id: CHEBI:16414
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-valine","termid":"CHEBI:16414"}


id: MONDO:0008661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Generalized well circumscribed patches of leukoderma that are generally distributed over symmetric body locations and is due to autoimmune destruction of melanocytes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"vitiligo","secondary_identifiers":["DOID:12306","ICD10CM:L80","icd11.foundation:1894744640","MESH:D014820","Orphanet:247871","MEDGEN:22677","NCIT:C26915","EFO:0004208","ICD9:709.01","UMLS:C0042900"],"termid":"MONDO:0008661","xrefs":{"Monarch":{"xref_id":"0008661"}}}


id: PBO:0060790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase core subunit S1","termid":"PBO:0060790"}


id: MONDO:0020514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thymoma (obsolete MONDO:0020514)","termid":"MONDO:0020514","xrefs":{"Monarch":{"xref_id":"0020514"}}}


id: PBO:0047826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXO6 antisense RNA 1","termid":"PBO:0047826"}


id: GO:1990677
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that promotes the biogenesis of mitochondrial F1Fo-ATP synthase by facilitating assembly of the peripheral stalk. Loss of INAC function causes dissociation of the F1-domain from the membrane-integral Fo-portion.","definition_xrefs":["GOC:bhm","PMID:24942160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005739","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"mitochondrial inner membrane assembly complex","synonyms":[{"name":"INAC complex","type":"exact"},{"name":"inner membrane assembly complex","type":"broad"},{"name":"mitochondrion inner membrane assembly complex","type":"exact"}],"termid":"GO:1990677"}


id: GO:0046345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of abscisic acid, 5-(1-hydroxy-2,6,6,trimethyl-4-oxocyclohex-2-en-1-y1)-3-methylpenta-2,4-dienoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abscisic acid metabolic process","termid":"GO:0009687"},{"relation_name":"is_a","term_name":"sesquiterpenoid catabolic process","termid":"GO:0016107"},{"relation_name":"is_a","term_name":"apocarotenoid catabolic process","termid":"GO:0043290"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"abscisic acid catabolic process","synonyms":[{"name":"abscisic acid breakdown","type":"exact"},{"name":"abscisic acid catabolism","type":"exact"},{"name":"abscisic acid degradation","type":"exact"}],"termid":"GO:0046345"}


id: FYPO:0005125
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of one or more RNAs that are normally expressed during nitrogen starvation measured in a cell is higher than normal (i.e. higher than observed in wild-type cells) during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during meiotic cell cycle","termid":"FYPO:0005120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased level of nitrogen starvation gene mRNA during meiotic cell cycle","synonyms":[{"name":"increased level of cellular response to nitrogen starvation gene mRNA during meiotic cell cycle","type":"exact"},{"name":"increased level of nitrogen depletion gene mRNA during meiotic cell cycle","type":"exact"},{"name":"increased level of nitrogen deprivation gene mRNA during meiotic cell cycle","type":"exact"},{"name":"increased level of nitrogen starvation gene RNA during meiotic cell cycle","type":"exact"},{"name":"increased level of nitrogen starvation gene transcripts during meiotic cell cycle","type":"exact"},{"name":"increased nitrogen starvation gene mRNA accumulation during meiotic cell cycle","type":"related"}],"termid":"FYPO:0005125"}


id: MONDO:0001394
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukemia","termid":"MONDO:0005059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"chronic erythremia","secondary_identifiers":["ICD9:207.1","DOID:11868"],"termid":"MONDO:0001394","xrefs":{"Monarch":{"xref_id":"0001394"}}}


id: GO:0048473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-methionine is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:mlg","PMID:12169620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"methionine transport","termid":"GO:0015821"},{"relation_name":"is_a","term_name":"D-amino acid transport","termid":"GO:0042940"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"D-methionine transmembrane transport","termid":"GO:0048473"}


id: FYECO:0000321
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which a copper chelator was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ copper chelator","synonyms":[{"name":"+ tetrathiomolybdate","type":"narrow"}],"termid":"FYECO:0000321"}


id: PBO:0055100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2518","termid":"PBO:0055100"}


id: PBO:0074460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin phosphodiesterase 4B, pseudogene","termid":"PBO:0074460"}


id: GO:1903349
data:
  {"annotated_genes":["SJAG_02699"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94106],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0097629"}]},"cv_name":"cellular_component","definition":"Any membrane that is part of an omegasome.","definition_xrefs":["GOC:mf","GOC:TermGenie","PMID:24591649","PMID:18725538","GO_REF:0000064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"omegasome","termid":"GO:1990462"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"omegasome membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903349","terms_by_termid":{"GO:0097629":null}}


id: PBO:0043812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copine 3","termid":"PBO:0043812"}


id: GO:0030059
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aralkylamine + H2O + 2 oxidized [azurin] = an aromatic aldehyde + 2 H+ + NH4+ + 2 reduced [azurin].","definition_xrefs":["PMID:10506161","RHEA:47796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, with a copper protein as acceptor","termid":"GO:0052877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"aralkylamine dehydrogenase (azurin) activity","secondary_identifiers":["MetaCyc:ARALKYLAMINE-DEHYDROGENASE-RXN","EC:1.4.9.2"],"synonyms":[{"name":"aralkylamine:(azurin) oxidoreductase (deaminating) activity","type":"exact"},{"name":"aromatic amine dehydrogenase (azurin) activity","type":"exact"}],"termid":"GO:0030059"}


id: MONDO:0003308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm that arises from the mesothelial cells of the pleura. The primary cause is exposure to asbestos. The major histologic variants are the epithelioid malignant mesothelioma, desmoplastic malignant mesothelioma, and sarcomatoid malignant mesothelioma. Patients present with persistent cough and shortness of breath.","definition_xrefs":["NCIT:C9351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesothelioma","termid":"MONDO:0005065"},{"relation_name":"is_a","term_name":"pleural neoplasm","termid":"MONDO:0021065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleural mesothelioma","secondary_identifiers":["DOID:5157","EFO:1000485","MEDGEN:237179","ONCOTREE:PLMESO","HP:0100002","SCTID:109372009","UMLS:C1377913"],"synonyms":[{"name":"benign pleural mesothelioma","type":"narrow"},{"name":"mesothelioma of pleura","type":"exact"},{"name":"mesothelioma of the pleura","type":"exact"},{"name":"pleura mesothelioma","type":"exact"},{"name":"pleural mesothelioma","type":"exact"},{"name":"pleural mesothelioma (disease)","type":"exact"},{"name":"pleural mesothelioma (disease), benign","type":"narrow"}],"termid":"MONDO:0003308","xrefs":{"Monarch":{"xref_id":"0003308"}}}


id: PBO:0089374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase Pyp2","termid":"PBO:0089374"}


id: PR:Q96VG3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC683.03 gene.","definition_xrefs":["UniProtKB:Q96VG3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C683.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC683.03","synonyms":[{"name":"Spom972h-SPAC683.03","type":"exact"}],"termid":"PR:Q96VG3"}


id: MONDO:0011495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Langerhans-cell histiocytosis (obsolete MONDO:0011495)","termid":"MONDO:0011495","xrefs":{"Monarch":{"xref_id":"0011495"}}}


id: GO:0031303
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the endosome membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of endosome membrane (obsolete GO:0031303)","synonyms":[{"name":"integral to endosome membrane","type":"narrow"}],"termid":"GO:0031303"}


id: MONDO:0005012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary melanoma arising from atypical melanocytes in the skin. Precursor lesions include acquired and congenital melanocytic nevi, and dysplastic nevi. Several histologic variants have been recognized, including superficial spreading melanoma, acral lentiginous melanoma, nodular melanoma, and lentigo maligna melanoma.","definition_xrefs":["NCIT:C3510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin cancer","termid":"MONDO:0002898"},{"relation_name":"is_a","term_name":"melanoma","termid":"MONDO:0005105"},{"relation_name":"is_a","term_name":"melanocytic skin neoplasm","termid":"MONDO:0021583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"cutaneous melanoma","secondary_identifiers":["EFO:0000389","ICD9:172.5","DOID:8923","ICD9:172.0","ICD9:172.3","ICD9:172.2","ICD9:172.8","ONCOTREE:SKCM","UMLS:C0151779","SCTID:93655004","ICD9:172.4","MEDGEN:57486","HP:0012056","ICD9:172","ICD9:172.9"],"synonyms":[{"name":"cutaneous (skin) melanoma","type":"exact"},{"name":"cutaneous melanoma","type":"exact"},{"name":"cutaneous melanoma (disease)","type":"exact"},{"name":"malignant cutaneous melanoma","type":"exact"},{"name":"malignant ear melanoma","type":"exact"},{"name":"malignant lip melanoma","type":"exact"},{"name":"malignant lower limb melanoma","type":"exact"},{"name":"malignant melanoma (of skin), stage unspecified","type":"exact"},{"name":"malignant melanoma of ear and/or external auricular canal","type":"exact"},{"name":"malignant melanoma of skin","type":"exact"},{"name":"malignant melanoma of skin of lower limb","type":"exact"},{"name":"malignant melanoma of skin of trunk except scrotum","type":"exact"},{"name":"malignant melanoma of skin of upper limb","type":"exact"},{"name":"malignant melanoma of skin stage unspecified","type":"exact"},{"name":"malignant neck melanoma","type":"exact"},{"name":"malignant scalp melanoma","type":"exact"},{"name":"malignant trunk melanoma","type":"exact"},{"name":"malignant upper limb melanoma","type":"exact"},{"name":"melanoma (disease) of zone of skin","type":"exact"},{"name":"melanoma of skin","type":"exact"},{"name":"melanoma of the skin","type":"exact"},{"name":"skin melanoma","type":"exact"},{"name":"skin, melanoma","type":"exact"},{"name":"zone of skin melanoma","type":"exact"},{"name":"zone of skin melanoma (disease)","type":"exact"}],"termid":"MONDO:0005012","xrefs":{"Monarch":{"xref_id":"0005012"}}}


id: PBO:0087319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sm-like protein involved in docking and fusion of exocytic vesicles; binds to assembled SNARE complexes at the membrane and stimulates membrane fusion; localization to sites of secretion (bud neck and bud tip) is dependent on SNARE function; interacts directly with essential exocyst subunit Sec6p","termid":"PBO:0087319"}


id: PBO:0031488
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_mitotic_spindle","termid":"PBO:0031488"}


id: GO:0031849
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an olfactory receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"olfactory receptor binding","synonyms":[{"name":"olfactory receptor ligand","type":"narrow"}],"termid":"GO:0031849"}


id: MONDO:1010572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes mellitus that occurs in long-tailed chinchilla.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes mellitus, non-human animal","termid":"MONDO:1010052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes mellitus, long-tailed chinchilla","secondary_identifiers":["OMIA:000279-34839"],"termid":"MONDO:1010572","xrefs":{"Monarch":{"xref_id":"1010572"}}}


id: SO:0002182
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes an antisense long, non-coding RNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"lncRNA_gene","termid":"SO:0002127"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense_lncRNA_gene","synonyms":[{"name":"antisense lncRNA gene","type":"exact"}],"termid":"SO:0002182"}


id: PBO:0039321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachidonate 12-lipoxygenase, 12S type","termid":"PBO:0039321"}


id: PBO:0041751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin associated and neddylation dissociated 1","termid":"PBO:0041751"}


id: MONDO:0004741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive inherited metabolic disorder caused by mutations in the FAH, HPD, and TAT genes. It is characterized by deficiency of one of the enzymes that are involved in the metabolism of tyrosine. It results in elevated blood tyrosine levels and accumulation of tyrosine and its byproducts in the liver, kidney, nervous system and other organs.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of tyrosine metabolism","termid":"MONDO:0017307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"tyrosinemia","secondary_identifiers":["NCIT:C98640","MEDGEN:78682","MESH:D020176","ICD10CM:E70.21","ICD9:270.2","OMIMPS:276700","DOID:9275","SCTID:190694001","UMLS:C0268483"],"termid":"MONDO:0004741","xrefs":{"Monarch":{"xref_id":"0004741"}}}


id: PBO:0078294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRD antisense RNA 1","termid":"PBO:0078294"}


id: PBO:0011151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-1-tetrahydrofolatesynthase/methylenetetrahydrof olatedehydrogenase/methylenetetrahydrofolatecyclohydrolase/ formyltetrahydrofolatesynthetase (predicted)","termid":"PBO:0011151"}


id: GO:0008504
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of monoamines, organic compounds that contain one amino group that is connected to an aromatic ring by an ethylene group (-CH2-CH2-), from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"active transmembrane transporter activity","termid":"GO:0022804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"monoamine transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-379393","Reactome:R-HSA-380586","GO:0015201","Reactome:R-HSA-444160","Reactome:R-HSA-372542","Reactome:R-HSA-5660706","Reactome:R-HSA-380620"],"termid":"GO:0008504"}


id: MONDO:0100440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing Asperger sydrome.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Asperger syndrome, susceptibility to","secondary_identifiers":["OMIMPS:608638"],"termid":"MONDO:0100440","xrefs":{"Monarch":{"xref_id":"0100440"}}}


id: PBO:0040560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-N-acetyl-galactosaminyltransferase 1","termid":"PBO:0040560"}


id: PBO:0079497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin interacting protein","termid":"PBO:0079497"}


id: MONDO:0011486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital muscular dystrophy type 1B is a rare, genetic neuromuscular disorder characterized by proximal and symmetrical muscle weakness (particularly of neck, sternomastoid, facial and diaphragm muscles), spinal rigidity, joint contractures (Achilles tendon, elbows, hands), generalized muscle hypertrophy and early respiratory failure (usually in the first decade of life). Patients typically present delayed motor milestones and grossly elevated serum creatine kinase levels, and with disease progression, forced expiratory abdominal squeeze and nocturnal hypoventilation.","definition_xrefs":["Orphanet:98893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"congenital muscular dystrophy 1B","secondary_identifiers":["OMIM:604801","MEDGEN:346746","UMLS:C1858118","MESH:C565748","SCTID:764944006","DOID:0110634","GARD:12586"],"synonyms":[{"name":"CMD1B","type":"exact"},{"name":"MDC1B","type":"exact"},{"name":"congenital muscular dystrophy type 1B","type":"exact"},{"name":"muscular dystrophy, congenital, 1B","type":"related"}],"termid":"MONDO:0011486","xrefs":{"Monarch":{"xref_id":"0011486"}}}


id: MONDO:0004538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cervical mucinous adenocarcinoma characterized by the presence of malignant glandular cells that resemble those of the endocervix.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical mucinous adenocarcinoma","termid":"MONDO:0002742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"endocervical type cervical mucinous adenocarcinoma","secondary_identifiers":["NCIT:C40202","DOID:8340"],"synonyms":[{"name":"cervical adenocarcinoma, endocervical type","type":"exact"},{"name":"cervical mucinous adenocarcinoma, endocervical type","type":"exact"}],"termid":"MONDO:0004538","xrefs":{"Monarch":{"xref_id":"0004538"}}}


id: FYPO:0003094
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which RNAs transcribed from the centromere outer repeat region are present at lower levels than normal.","definition_xrefs":["PMID:24095277","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"decreased centromeric outer repeat transcript level","synonyms":[{"name":"decreased accumulation of centromeric outer repeat transcripts","type":"related"},{"name":"decreased accumulation of centromeric outer repeat transcripts during vegetative growth","type":"related"},{"name":"decreased accumulation of non-coding outer repeat transcripts","type":"exact"},{"name":"decreased centromere outer repeat transcript level","type":"exact"},{"name":"decreased centromeric outer repeat transcript level during mitotic cell cycle","type":"related"},{"name":"decreased centromeric outer repeat transcript level during vegetative growth","type":"exact"},{"name":"decreased centromeric outer repeat-derived transcript level","type":"exact"},{"name":"decreased level of centromeric outer repeat transcripts","type":"exact"},{"name":"reduced centromeric outer repeat transcript level","type":"exact"}],"termid":"FYPO:0003094"}


id: PBO:0111064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spliceosome complex disassembly protein Ntr2, human GCFC2 ortholog","termid":"PBO:0111064"}


id: PBO:0059449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSANTD2 antisense RNA 1","termid":"PBO:0059449"}


id: PBO:0005722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex subunit Rpc34 (predicted)","termid":"PBO:0005722"}


id: MONDO:0011165
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any fibronectin glomerulopathy in which the cause of the disease is a mutation in the FN1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibronectin glomerulopathy","termid":"MONDO:0007671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"glomerulopathy with fibronectin deposits 2","secondary_identifiers":["UMLS:C1866075","OMIM:601894","SCTID:722759007","GARD:9914","MEDGEN:356149"],"synonyms":[{"name":"FN1 fibronectin glomerulopathy","type":"exact"},{"name":"GFND2","type":"related"},{"name":"fibronectin glomerulopathy","type":"related"},{"name":"fibronectin glomerulopathy caused by mutation in FN1","type":"exact"},{"name":"glomerular nephritis familial with fibronectin deposits","type":"related"},{"name":"glomerular nephritis, familial, with fibronectin deposits","type":"related"},{"name":"glomerulopathy with fibronectin deposits 2","type":"exact"},{"name":"glomerulopathy with fibronectin deposits type 2","type":"exact"}],"termid":"MONDO:0011165","xrefs":{"Monarch":{"xref_id":"0011165"}}}


id: PBO:0044071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin B","termid":"PBO:0044071"}


id: GO:1903296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glutamate secretion, where glutamate acts as a neurotransmitter.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:16782817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter secretion","termid":"GO:0001956"},{"relation_name":"is_a","term_name":"positive regulation of glutamate secretion","termid":"GO:0014049"},{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission, glutamatergic","termid":"GO:0051968"},{"relation_name":"is_a","term_name":"regulation of glutamate secretion, neurotransmission","termid":"GO:1903294"},{"relation_name":"positively_regulates","term_name":"glutamate secretion, neurotransmission","termid":"GO:0061535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"positive regulation of glutamate secretion, neurotransmission","synonyms":[{"name":"activation of glutamate secretion, neurotransmission","type":"narrow"},{"name":"up regulation of glutamate secretion, neurotransmission","type":"exact"},{"name":"up-regulation of glutamate secretion, neurotransmission","type":"exact"},{"name":"upregulation of glutamate secretion, neurotransmission","type":"exact"}],"termid":"GO:1903296"}


id: PBO:0060700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDUFA4 mitochondrial complex associated like 2","termid":"PBO:0060700"}


id: PR:G2TRN9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRN9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C11D3.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.11c","synonyms":[{"name":"Spom972h-SPAC11D3.11c","type":"exact"}],"termid":"PR:G2TRN9"}


id: GO:0140962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of a chemical within extracellular body fluids, such as blood, xylem or phloem, of a multicellular organism. This is distinct from maintenance of cellular homeostasis, which occurs within a cell.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal-level homeostasis","termid":"GO:0048871"},{"relation_name":"is_a","term_name":"chemical homeostasis","termid":"GO:0048878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multicellular organismal-level chemical homeostasis","synonyms":[{"name":"multicellular organism level chemical homeostasis","type":"exact"},{"name":"organismal level chemical homeostasis","type":"exact"}],"termid":"GO:0140962"}


id: PBO:0053461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 421","termid":"PBO:0053461"}


id: PBO:0068173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 480","termid":"PBO:0068173"}


id: MONDO:0015411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital abnormality consisting of an opening or gap in the face, which results from incomplete fusion of one or more of the embryonic facial prominences.","definition_xrefs":["NCIT:C124510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"disorder of facial skeleton","termid":"MONDO:0023369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial cleft","secondary_identifiers":["SCTID:92821006","icd11.foundation:11389088","MEDGEN:146898","UMLS:C0685787","GARD:19964","Orphanet:141229"],"synonyms":[{"name":"cleft face","type":"exact"},{"name":"craniofacial cleft","type":"exact"},{"name":"prosoposchisis","type":"related"}],"termid":"MONDO:0015411","xrefs":{"Monarch":{"xref_id":"0015411"}}}


id: FYPO:0000940
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000933"},{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle pole body","termid":"FYPO:0000939"},{"relation_name":"is_a","term_name":"decreased protein localization to spindle pole body","termid":"FYPO:0002770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle pole body","synonyms":[{"name":"decreased protein localisation to mitotic spindle pole body","type":"exact"},{"name":"decreased protein localization to mitotic SPB","type":"exact"},{"name":"decreased protein localization to spindle pole body during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to spindle pole body during vegetative growth","type":"exact"},{"name":"reduced protein localization to mitotic spindle pole body","type":"exact"}],"termid":"FYPO:0000940"}


id: FYPO:0000067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of brefeldin A than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0002682","FYPO:0000003"],"is_obsolete":false,"name":"resistance to brefeldin A","synonyms":[{"name":"resistance to BFA","type":"exact"},{"name":"resistance to brefeldin A during mitotic cell cycle","type":"related"},{"name":"resistance to brefeldin A during vegetative growth","type":"exact"},{"name":"resistant to Brefeldin A","type":"exact"}],"termid":"FYPO:0000067"}


id: MONDO:0016831
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"linear verrucous nevus syndrome","secondary_identifiers":["GARD:3259","UMLS:C5679838","MEDGEN:1806291","Orphanet:2611"],"synonyms":[{"name":"linear hamartoma syndrome","type":"exact"}],"termid":"MONDO:0016831","xrefs":{"Monarch":{"xref_id":"0016831"}}}


id: PBO:0087364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sporulation-specific exo-1,3-beta-glucanase; contributes to ascospore thermoresistance; SPR1 has a paralog, EXG1, that arose from the whole genome duplication","termid":"PBO:0087364"}


id: FYPO:0006275
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which pyknosis, the form of chromatin condensation typical of cell death by apoptosis, occurs at a greater frequency than normal when the population in which the cell is found is in stationary phase.","definition_xrefs":["PMID:18653539","PomBase:mah","GO:0030263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal apoptotic process","termid":"FYPO:0000629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased pyknosis during stationary phase","synonyms":[{"name":"increased apoptotic chromosome condensation during stationary phase","type":"exact"}],"termid":"FYPO:0006275"}


id: PBO:0034603
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_meiosis_II","termid":"PBO:0034603"}


id: PBO:0074680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 63B","termid":"PBO:0074680"}


id: PBO:0049888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 7","termid":"PBO:0049888"}


id: GO:0042901
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of an arabinan, a polysaccharide composed of arabinose residues, from one side of a membrane to the other.","definition_xrefs":["GOC:jl","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide transmembrane transporter activity","termid":"GO:0015159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"arabinan transmembrane transporter activity","termid":"GO:0042901"}


id: MONDO:0024610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Skin diseases caused by ARTHROPODS; HELMINTHS; or other parasites.","definition_xrefs":["MESH:D012876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parasitic infectious disease","termid":"MONDO:0005135"},{"relation_name":"is_a","term_name":"skin disorder caused by infection","termid":"MONDO:0024294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"parasitic skin disorder","secondary_identifiers":["MEDGEN:20780","UMLS:C0037280"],"synonyms":[{"name":"disease, parasitic skin","type":"related"},{"name":"diseases, parasitic skin","type":"related"},{"name":"parasitic skin disease","type":"exact"},{"name":"parasitic skin diseases","type":"related"},{"name":"skin disease, parasitic","type":"related"}],"termid":"MONDO:0024610","xrefs":{"Monarch":{"xref_id":"0024610"}}}


id: PBO:0031113
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_G1/S_phase_transcription","termid":"PBO:0031113"}


id: PBO:0065298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRSS3 pseudogene 2","termid":"PBO:0065298"}


id: PBO:0035716
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-T-shaped_cell_during_recovery_from_quiescence","termid":"PBO:0035716"}


id: PBO:0064710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 46","termid":"PBO:0064710"}


id: GO:0006294
data:
  {"annotated_genes":["SJAG_01207"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108469],"is_not":false,"summary":null,"term":"GO:0006294"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins on DNA to form the multiprotein complex involved in damage recognition, DNA helix unwinding, and endonucleolytic cleavage at the site of DNA damage. This assembly occurs before the phosphodiester backbone of the damaged strand is cleaved 3' and 5' of the site of DNA damage.","definition_xrefs":["PMID:10197977","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex assembly","termid":"GO:0065004"},{"relation_name":"part_of","term_name":"nucleotide-excision repair","termid":"GO:0006289"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0006281","GO:0065003","GO:0006259"],"is_obsolete":false,"name":"nucleotide-excision repair, preincision complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleotide-excision repair, preincision complex formation","type":"exact"}],"termid":"GO:0006294","terms_by_termid":{"GO:0006294":null}}


id: _global:indirectly_regulates
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p indirectly regulates q iff p is indirectly causally upstream of q and p regulates q.","direct_ancestors":[{"relation_name":"is_a","term_name":"indirectly_causally_upstream_of","termid":"_global:indirectly_causally_upstream_of"},{"relation_name":"is_a","term_name":"regulates","termid":"_global:regulates"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indirectly_regulates","secondary_identifiers":["RO:0012012"],"termid":"_global:indirectly_regulates"}


id: GO:0033025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of mast cell apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"regulation of myeloid cell apoptotic process","termid":"GO:0033032"},{"relation_name":"is_a","term_name":"regulation of leukocyte apoptotic process","termid":"GO:2000106"},{"relation_name":"regulates","term_name":"mast cell apoptotic process","termid":"GO:0033024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mast cell apoptotic process","synonyms":[{"name":"regulation of mast cell apoptosis","type":"narrow"}],"termid":"GO:0033025"}


id: PBO:0067203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 268, pseudogene","termid":"PBO:0067203"}


id: PBO:0000955
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Sep1","termid":"PBO:0000955"}


id: PBO:0081378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 217","termid":"PBO:0081378"}


id: PBO:0047532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGD5 antisense RNA 1","termid":"PBO:0047532"}


id: PBO:0036361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP, GTPase activating protein Rga3","termid":"PBO:0036361"}


id: GO:0032497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a lipopolysaccharide stimulus is received by a cell and converted into a molecular signal. Lipopolysaccharide is a major component of the cell wall of gram-negative bacteria.","definition_xrefs":["PMID:15998797","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of molecule of bacterial origin","termid":"GO:0032490"},{"relation_name":"is_a","term_name":"response to lipopolysaccharide","termid":"GO:0032496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of lipopolysaccharide","synonyms":[{"name":"detection of LPS","type":"exact"}],"termid":"GO:0032497"}


id: GO:1903110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of single-strand break repair via homologous recombination.","definition_xrefs":["GOC:bhm","PMID:24339919","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA recombination","termid":"GO:0000018"},{"relation_name":"is_a","term_name":"regulation of single strand break repair","termid":"GO:1903516"},{"relation_name":"regulates","term_name":"single-strand break repair via homologous recombination","termid":"GO:1990396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"regulation of single-strand break repair via homologous recombination","termid":"GO:1903110"}


id: PBO:0036312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated WD repeat protein Atg18a","termid":"PBO:0036312"}


id: GO:0102866
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an (8Z,11Z,14Z)-icosatrienoyl-containing glycerolipid + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = (5Z,8Z,11Z,14Z)-eicosatetraenoyl-containing glycerolipid + 2 Fe(III)-[cytochrome b5] + 2 H2O. Also converts an (8Z,11Z,14Z,17Z)-eicosatetraenoyl-containing glycerolipid into a (5Z,8Z,11Z,14Z,17Z)-eicosapentaenoyl-containing glycerolipid.","definition_xrefs":["EC:1.14.19.30"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acyl-lipid (8-3)-desaturase activity","synonyms":[{"name":"Delta(5)-fatty-acid desaturase activity","type":"exact"},{"name":"acyl-lipid 5-desaturase activity","type":"related"},{"name":"di-homo-gamma-linolenate delta5 desaturase activity","type":"related"}],"termid":"GO:0102866"}


id: PBO:0091438
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ncRNA feature moved from the opposite strand","termid":"PBO:0091438"}


id: MONDO:0013813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary dystonia, DYT21 type is a subtype of mixed dystonia with a late-onset form of pure torsion dystonia.","definition_xrefs":["Orphanet:306734"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generalized dystonia","termid":"MONDO:0000476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"dystonia 21","secondary_identifiers":["GARD:17383","UMLS:C3281236","MEDGEN:482866","DOID:0090046","OMIM:614588"],"synonyms":[{"name":"DYT21","type":"exact"},{"name":"dystonia 21","type":"exact"},{"name":"dystonia type 21","type":"exact"},{"name":"primary dystonia, DYT21 type","type":"related"}],"termid":"MONDO:0013813","xrefs":{"Monarch":{"xref_id":"0013813"}}}


id: PBO:0044574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dopamine beta-hydroxylase","termid":"PBO:0044574"}


id: GO:0050740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-FMN linkage via O3-riboflavin phosphoryl-L-threonine.","definition_xrefs":["RESID:AA0349"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FMN linkage via O3-riboflavin phosphoryl-L-threonine (obsolete GO:0050740)","termid":"GO:0050740"}


id: FYPO:0004844
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which lagging strand elongation during nuclear DNA replication is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication elongation","termid":"FYPO:0006730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000293","FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic DNA replication lagging strand elongation","synonyms":[{"name":"abnormal DNA replication lagging strand elongation during mitotic cell cycle","type":"exact"},{"name":"abnormal DNA replication lagging strand elongation during vegetative growth","type":"exact"},{"name":"abnormal mitotic DNA replication lagging strand synthesis","type":"exact"}],"termid":"FYPO:0004844"}


id: MONDO:0031004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic disorder of sex development of gynecological interest (obsolete MONDO:0031004)","secondary_identifiers":["Orphanet:325665"],"termid":"MONDO:0031004","xrefs":{"Monarch":{"xref_id":"0031004"}}}


id: GO:0009674
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: K+(out) + Na+(out) = K+(in) + Na+(in).","definition_xrefs":["TC:2.A.38.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transporter activity","termid":"GO:0015079"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"potassium:sodium symporter activity","synonyms":[{"name":"high affinity potassium transporter","type":"related"}],"termid":"GO:0009674"}


id: FYPO:0005327
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the repair of cyclobutane pyrimidine dimers by error-free translesion synthesis does not occur.","definition_xrefs":["PomBase:mah","PMID:20453833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal error-free translesion synthesis","termid":"FYPO:0005323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001320","FYPO:0000293","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished error-free translesion synthesis of cyclobutane pyrimidine dimers","synonyms":[{"name":"abolished error-free translesion synthesis across TT-CPD","type":"exact"},{"name":"abolished error-free translesion synthesis of cyclobutane pyrimidine dimers during mitotic cell cycle","type":"related"},{"name":"abolished error-free translesion synthesis of cyclobutane pyrimidine dimers during vegetative growth","type":"exact"},{"name":"error-free translesion synthesis of cyclobutane pyrimidine dimers abolished","type":"related"}],"termid":"FYPO:0005327"}


id: PBO:0060821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NECAP endocytosis associated 1 pseudogene 2","termid":"PBO:0060821"}


id: PBO:0039297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG11 alpha-1,2-mannosyltransferase","termid":"PBO:0039297"}


id: PBO:0108833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAT2A pseudogene 1","termid":"PBO:0108833"}


id: MOD:01984
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-alanine residue by a thioether bond to form 2-(S-L-cysteinyl)-L-alanine.","definition_xrefs":["PubMed:21526839","RESID:AA0621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-carbon thioether crosslinked residues","termid":"MOD:01992"},{"relation_name":"is_a","term_name":"crosslinked L-alanine residue","termid":"MOD:02040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"2-(L-cystein-S-yl)-L-alanine","synonyms":[{"name":"(2R)-2-amino-2-[(2R)-2-amino-2-carboxyethyl]sulfanyl-3-hydroxybutanoic acid","type":"exact"},{"name":"(2R,5R)-2,5-diamino-5-methyl-4-thiahexanedioic acid","type":"exact"},{"name":"alpha-(L-cystein-S-yl)-L-alanine","type":"exact"}],"termid":"MOD:01984"}


id: GO:0005356
data:
  {"annotated_genes":["SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[116707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: D-glucose + H+ = D-glucose + H+. Symporter activity enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose:proton symporter activity","termid":"GO:0009679"},{"relation_name":"is_a","term_name":"D-glucose transmembrane transporter activity","termid":"GO:0055056"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"D-glucose:proton symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0005361"],"synonyms":[{"name":"glucose:proton symporter activity","type":"exact"},{"name":"hydrogen:glucose symporter activity","type":"exact"},{"name":"hydrogen:glucose transporter activity","type":"related"},{"name":"transepithelial hydrogen/glucose transporter activity","type":"related"},{"name":"transepithelial hydrogen:glucose symporter activity","type":"narrow"},{"name":"transepithelial hydrogen:glucose transporter activity","type":"related"}],"termid":"GO:0005356","terms_by_termid":{"GO:0005358":null}}


id: PATO:0001445
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A wholeness quality inhering in a bearer by virtue of the bearer's being taken apart into its constituent parts.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"broken","termid":"PATO:0001444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disassembled","termid":"PATO:0001445"}


id: MONDO:0010201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multicentric osteolysis-nodulosis-arthropathy spectrum","termid":"MONDO:0018298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Winchester syndrome","secondary_identifiers":["GARD:7894","ICD9:733.29","NCIT:C170731","MESH:C536709","MEDGEN:98152","NORD:1857","OMIM:277950","SCTID:254151006","UMLS:C0432289","DOID:0080696"],"synonyms":[{"name":"Al-Qeel Sewairi syndrome","type":"related"},{"name":"MMP14-related multicentric osteolysis, nodulosis, and arthropathy","type":"exact"},{"name":"MONA, MMP14-related","type":"exact"},{"name":"NOA syndrome","type":"related"},{"name":"WNCHRS","type":"exact"},{"name":"Winchester syndrome","type":"exact"},{"name":"multicentric osteolysis, nodulosis and arthropathy","type":"related"},{"name":"multicentric osteolysis, nodulosis and arthropathy, MMP14-related","type":"exact"},{"name":"nodulosis arthropathy osteolysis syndrome","type":"related"}],"termid":"MONDO:0010201","xrefs":{"Monarch":{"xref_id":"0010201"}}}


id: MONDO:0007857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Keratosis palmaris et plantaris-clinodactyly syndrome is characterized by the association of palmoplantar keratosis with clinodactyly of the fifth finger. Less than 20 cases have been described in the literature so far, and the majority of reported patients were of Mexican origin. Transmission is autosomal dominant.","definition_xrefs":["Orphanet:86919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"keratosis palmaris et plantaris-clinodactyly syndrome","secondary_identifiers":["GARD:16766","UMLS:C1835663","MEDGEN:320656","MESH:C563646","OMIM:148520"],"synonyms":[{"name":"keratosis palmaris ET plantaris with clinodactyly","type":"related"},{"name":"palmoplantar keratoderma-clinodactyly syndrome","type":"exact"}],"termid":"MONDO:0007857","xrefs":{"Monarch":{"xref_id":"0007857"}}}


id: PBO:0039996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARL8B pseudogene 2","termid":"PBO:0039996"}


id: PBO:0079338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 23","termid":"PBO:0079338"}


id: PBO:0059326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L58","termid":"PBO:0059326"}


id: PBO:0034366
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_in-paralogy_relationship_with","termid":"PBO:0034366"}


id: GO:0002903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of B cell apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell apoptotic process","termid":"GO:0002902"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte apoptotic process","termid":"GO:0070229"},{"relation_name":"negatively_regulates","term_name":"B cell apoptotic process","termid":"GO:0001783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of B cell apoptotic process","synonyms":[{"name":"down regulation of B cell apoptosis","type":"exact"},{"name":"down-regulation of B cell apoptosis","type":"exact"},{"name":"downregulation of B cell apoptosis","type":"exact"},{"name":"inhibition of B cell apoptosis","type":"narrow"},{"name":"negative regulation of B cell apoptosis","type":"narrow"}],"termid":"GO:0002903"}


id: FYPO:0000154
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which negative regulation of the G0 to G1 transition is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal negative regulation of G0 to G1 transition","synonyms":[{"name":"abnormal maintenance of G0 arrest","type":"exact"},{"name":"abnormal maintenance of G0 phase","type":"exact"},{"name":"abnormal maintenance of cell cycle quiescence","type":"exact"},{"name":"abnormal maintenance of cell quiescence","type":"exact"}],"termid":"FYPO:0000154"}


id: PBO:0028454
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multinucleate","termid":"PBO:0028454"}


id: MONDO:0002786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer involving a diencephalon.","definition_xrefs":["MONDO:patterns/cancer"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supratentorial cancer","termid":"MONDO:0002071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"diencephalic cancer","secondary_identifiers":["NCIT:C5126","MEDGEN:233659","DOID:3843","UMLS:C1334576"],"synonyms":[{"name":"cancer of diencephalon","type":"exact"},{"name":"diencephalic neoplasm","type":"related"},{"name":"diencephalon cancer","type":"exact"},{"name":"malignant diencephalic neoplasm","type":"exact"},{"name":"malignant diencephalic neoplasms","type":"exact"},{"name":"malignant diencephalic tumor","type":"exact"},{"name":"malignant diencephalic tumour","type":"exact"},{"name":"malignant diencephalon neoplasm","type":"exact"},{"name":"malignant neoplasm of diencephalon","type":"exact"},{"name":"tumor of diencephalon","type":"exact"},{"name":"tumour of diencephalon","type":"exact"}],"termid":"MONDO:0002786","xrefs":{"Monarch":{"xref_id":"0002786"}}}


id: PBO:0046692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethanolamine kinase 1","termid":"PBO:0046692"}


id: GO:0000301
data:
  {"annotated_genes":["SJAG_00332","SJAG_00578","SJAG_00041","SJAG_01071"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88440,90632,108987,116331],"is_not":false,"summary":null,"term":"GO:0000301"}]},"cv_name":"biological_process","definition":"The retrograde movement of substances within the Golgi, mediated by COP I vesicles. Cis-Golgi vesicles are constantly moving forward through the Golgi stack by cisternal progression, eventually becoming trans-Golgi vesicles. They then selectively transport membrane and luminal proteins from the trans- to the medial-Golgi while leaving others behind in the trans-Golgi cisternae; similarly, they selectively move proteins from the medial- to the cis-Golgi.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intra-Golgi vesicle-mediated transport","termid":"GO:0006891"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00041":null,"SJAG_00332":null,"SJAG_00578":null,"SJAG_01071":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"retrograde transport, vesicle recycling within Golgi","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"retrograde (vesicle recycling within Golgi) transport","type":"exact"}],"termid":"GO:0000301","terms_by_termid":{"GO:0000301":null}}


id: MONDO:0003328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that arises from the fallopian tube and originates from mesothelial cells. It is characterized by the presence of gland-like structures that are lined by flat or cuboidal cells. It is usually discovered as an incidental finding.","definition_xrefs":["NCIT:C40129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fallopian tube benign neoplasm","termid":"MONDO:0000645"},{"relation_name":"is_a","term_name":"benign mesothelioma","termid":"MONDO:0002373"},{"relation_name":"is_a","term_name":"adenomatoid tumor","termid":"MONDO:0004230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fallopian tube adenomatoid tumor","secondary_identifiers":["UMLS:C1517110","MEDGEN:273291","DOID:5196"],"synonyms":[{"name":"fallopian tube adenomatoid tumor","type":"exact"}],"termid":"MONDO:0003328","xrefs":{"Monarch":{"xref_id":"0003328"}}}


id: PR:Q9URZ1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein-L-isoaspartate(D-aspartate) O-methyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11579:SF0","PRO:DNx","OMA:SCHPO02279"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate O-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC869.08","secondary_identifiers":["UniProtKB:Q9URZ1"],"synonyms":[{"name":"L-isoaspartyl protein carboxyl methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PIMT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PCMT1","type":"exact"},{"name":"protein L-isoaspartyl methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"protein-beta-aspartate methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9URZ1"}


id: PBO:0064159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group IID","termid":"PBO:0064159"}


id: GO:0021937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from Purkinje cells to granule cell precursors.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:cls","GOC:jid","PMID:32554107","PMID:15157725","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cerebellar Purkinje cell-granule cell precursor cell signaling","termid":"GO:0021937"}


id: PBO:0077636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin related transmembrane protein 2","termid":"PBO:0077636"}


id: GO:0033699
data:
  {"annotated_genes":["SJAG_04410"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115181],"is_not":false,"summary":null,"term":"GO:0033699"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5'-AMP-DNA + H2O = AMP + DNA; nucleophilic release of a covalently linked adenylate residue from a DNA strand, leaving a 5' phosphate terminus.","definition_xrefs":["GOC:mah","PMID:17276982","PMID:16547001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5'-3' DNA exonuclease activity","termid":"GO:0035312"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0004527"}],"interesting_parent_ids":["GO:0004527","GO:0016787","GO:0140097","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"DNA 5'-adenosine monophosphate hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.6.1.71"],"synonyms":[{"name":"AMP-removal activity","type":"related"},{"name":"DNA 5'-adenylate hydrolase activity","type":"exact"},{"name":"DNA adenylate hydrolysis activity","type":"broad"},{"name":"DNA de-adenylation","type":"related"},{"name":"DNA deadenylation","type":"related"}],"termid":"GO:0033699","terms_by_termid":{"GO:0033699":null}}


id: PR:P54280
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mismatch repair endonuclease PMS2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01675","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA mismatch repair protein pms1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.02c","secondary_identifiers":["UniProtKB:P54280"],"synonyms":[{"name":"Spom972h-PMS2","type":"exact"}],"termid":"PR:P54280"}


id: MONDO:0018003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"limbic encephalitis","termid":"MONDO:0015588"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"limbic encephalitis with DPP6 antibodies","secondary_identifiers":["MEDGEN:1664407","Orphanet:329341","UMLS:C4750833"],"synonyms":[{"name":"limbic encephalitis with DPPX antibodies","type":"exact"},{"name":"limbic encephalitis with dipeptidyl-peptidase 6 antibodies","type":"exact"}],"termid":"MONDO:0018003","xrefs":{"Monarch":{"xref_id":"0018003"}}}


id: PBO:0077554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 260","termid":"PBO:0077554"}


id: GO:0014858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of skeletal muscle cell proliferation.","definition_xrefs":["GOC:ef","CL:0000188","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle cell proliferation","termid":"GO:0014857"},{"relation_name":"positively_regulates","term_name":"skeletal muscle cell proliferation","termid":"GO:0014856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of skeletal muscle cell proliferation","termid":"GO:0014858"}


id: PBO:0048444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate binding protein 7","termid":"PBO:0048444"}


id: MOD:01019
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxymethylphenyl linker","synonyms":[{"name":"HMP","type":"exact"}],"termid":"MOD:01019"}


id: PBO:0052745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 37","termid":"PBO:0052745"}


id: SO:0000646
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A small RNA molecule that is the product of a longer exogenous or endogenous dsRNA, which is either a bimolecular duplex or very long hairpin, processed (via the Dicer pathway) such that numerous siRNAs accumulate from both strands of the dsRNA. siRNAs trigger the cleavage of their target molecules.","definition_xrefs":["PMID:12592000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small_regulatory_ncRNA","termid":"SO:0000370"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/SiRNA"],"synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:siRNA","type":"exact"},{"name":"small interfering RNA","type":"exact"}],"termid":"SO:0000646"}


id: GO:2001110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lens epithelial cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of lens epithelial cell proliferation","termid":"GO:2001109"},{"relation_name":"negatively_regulates","term_name":"lens epithelial cell proliferation","termid":"GO:0097166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lens epithelial cell proliferation","termid":"GO:2001110"}


id: MONDO:0018373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Necrotic changes in the bone tissue due to interruption of blood supply. Most often affecting the epiphysis of the long bones, the necrotic changes result in the collapse and the destruction of the bone structure.","definition_xrefs":["NCIT:C34841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteonecrosis","termid":"MONDO:0005380"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"avascular necrosis","secondary_identifiers":["SCTID:397758007","Orphanet:399164","MEDGEN:10200","GARD:21658","UMLS:C0027543"],"synonyms":[{"name":"AVN","type":"exact"},{"name":"avascular necrosis of bone","type":"exact"}],"termid":"MONDO:0018373","xrefs":{"Monarch":{"xref_id":"0018373"}}}


id: PBO:0040676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAR1 pseudogene 1","termid":"PBO:0040676"}


id: PBO:0059307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L50 pseudogene 3","termid":"PBO:0059307"}


id: PBO:0040495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aurora kinase A and ninein interacting protein","termid":"PBO:0040495"}


id: GO:0031072
data:
  {"annotated_genes":["SJAG_01615","SJAG_01670","SJAG_01874","SJAG_03094","SJAG_03135","SJAG_01052","SJAG_00790","SJAG_01186","SJAG_00112","SJAG_03784","SJAG_01914","SJAG_03717","SJAG_00403","SJAG_04518","SJAG_03237","SJAG_04055","SJAG_01160","SJAG_00436","SJAG_03955","SJAG_00750"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63024,69418,70227,70370,71059,71808,72189,75417,79780],"is_not":false,"summary":null,"term":"GO:0031072"},{"annotations":[58806,66115,70466,79255,79498,66344,77326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030544"},{"annotations":[77328,76203,79257,74473,73410,76051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051879"}]},"cv_name":"molecular_function","definition":"Binding to a heat shock protein, a protein synthesized or activated in response to heat shock.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00112":null,"SJAG_00403":null,"SJAG_00436":null,"SJAG_00750":null,"SJAG_00790":null,"SJAG_01052":null,"SJAG_01160":null,"SJAG_01186":null,"SJAG_01615":null,"SJAG_01670":null,"SJAG_01874":null,"SJAG_01914":null,"SJAG_03094":null,"SJAG_03135":null,"SJAG_03237":null,"SJAG_03717":null,"SJAG_03784":null,"SJAG_03955":null,"SJAG_04055":null,"SJAG_04518":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"heat shock protein binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0031072","terms_by_termid":{"GO:0030544":null,"GO:0031072":null,"GO:0051879":null}}


id: GO:0036214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a contractile ring is positioned or maintained in a specific location.","definition_xrefs":["GOC:vw","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete contractile ring localization (obsolete GO:0036214)","termid":"GO:0036214"}


id: PBO:0074679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 63","termid":"PBO:0074679"}


id: GO:0001999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The physiological response of the kidneys to a decrease in blood flow.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process involved in regulation of systemic arterial blood pressure","termid":"GO:0003071"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by circulatory renin-angiotensin","termid":"GO:0001991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal response to blood flow involved in circulatory renin-angiotensin regulation of systemic arterial blood pressure","synonyms":[{"name":"renal response to blood flow during renin-angiotensin control of blood pressure","type":"related"}],"termid":"GO:0001999"}


id: GO:0033332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ent-kaurene. Ent-kaurene is a tetracyclic diterpenoid that is a precursor of several plant isoprenoids, including gibberellins.","definition_xrefs":["MetaCyc:PWY-5032","GOC:mah","PMID:17064690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ent-kaurene metabolic process","termid":"GO:0033331"},{"relation_name":"is_a","term_name":"terpene biosynthetic process","termid":"GO:0046246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"ent-kaurene biosynthetic process","synonyms":[{"name":"ent-kaurene anabolism","type":"exact"},{"name":"ent-kaurene biosynthesis","type":"exact"},{"name":"ent-kaurene formation","type":"exact"},{"name":"ent-kaurene synthesis","type":"exact"}],"termid":"GO:0033332"}


id: GO:1905397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in an activated CD8-positive, alpha-beta T cell.","definition_xrefs":["GO_REF:0000085","GOC:TermGenie","PMID:24187568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell apoptotic process","termid":"GO:0070231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activated CD8-positive, alpha-beta T cell apoptotic process","synonyms":[{"name":"activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"}],"termid":"GO:1905397"}


id: PBO:0064592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member K, pseudogene","termid":"PBO:0064592"}


id: PBO:0043738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 17","termid":"PBO:0043738"}


id: GO:0062090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of taurine biosynthesis.","definition_xrefs":["PMID:24911144","GOC:BHF","PMID:18648510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of taurine biosynthetic process","termid":"GO:0062089"},{"relation_name":"positively_regulates","term_name":"taurine biosynthetic process","termid":"GO:0042412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of taurine biosynthetic process","termid":"GO:0062090"}


id: PBO:0081818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 736 pseudogene 11, Y-linked","termid":"PBO:0081818"}


id: GO:0044007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The movement of an organism from a host to another host or from a host to another place in the environment. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete dissemination or transmission of symbiont from host (obsolete GO:0044007)","synonyms":[{"name":"dissemination or transmission of organism from host","type":"exact"}],"termid":"GO:0044007"}


id: PBO:0078712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAG) 1-7","termid":"PBO:0078712"}


id: GO:0047032
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3alpha-hydroxyglycyrrhetinate + NADP+ = 3-oxoglycyrrhetinate + H+ + NADPH.","definition_xrefs":["EC:1.1.1.230","RHEA:20816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-alpha-hydroxyglycyrrhetinate dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.230-RXN","KEGG_REACTION:R04099"],"synonyms":[{"name":"3alpha-hydroxyglycyrrhetinate dehydrogenase activity","type":"related"},{"name":"3alpha-hydroxyglycyrrhetinate:NADP+ 3-oxidoreductase activity","type":"related"}],"termid":"GO:0047032"}


id: GO:1902557
data:
  {"annotated_genes":["SJAG_03334"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100857],"is_not":false,"summary":null,"term":"GO:1902557"}]},"cv_name":"molecular_function","definition":"Enables the transfer of 5'-adenylyl sulfate from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie","PMID:24296033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenine nucleotide transmembrane transporter activity","termid":"GO:0000295"},{"relation_name":"is_a","term_name":"purine ribonucleotide transmembrane transporter activity","termid":"GO:0005346"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"5'-adenylyl sulfate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902557","terms_by_termid":{"GO:1902557":null}}


id: GO:0102919
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: FMNH2 + O2 = 5,6-dimethylbenzimidazole + D-erythrose 4-phosphate + dialuric acid.","definition_xrefs":["GOC:pz","EC:1.13.11.79"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"5,6-dimethylbenzimidazole synthase activity","secondary_identifiers":["MetaCyc:RXN-8771","RHEA:27345"],"termid":"GO:0102919"}


id: PBO:0061530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSMCE1 divergent transcript","termid":"PBO:0061530"}


id: MONDO:1010030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant high-grade glioma that occurs during childhood in the central nervous system.","definition_xrefs":["PMID:38496580","PMID:35456430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"},{"relation_name":"is_a","term_name":"malignant glioma","termid":"MONDO:0100342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pediatric high-grade glioma","secondary_identifiers":["NCIT:C202298"],"synonyms":[{"name":"childhood malignant glioma","type":"exact"},{"name":"pHGG","type":"exact"}],"termid":"MONDO:1010030","xrefs":{"Monarch":{"xref_id":"1010030"}}}


id: GO:0010778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of DNA proceeding from the broken 3' single-strand DNA end that uses the homologous intact duplex as the template resulting in meiotic recombination. Meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic DNA repair synthesis","termid":"GO:0000711"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0140013","GO:0006281","GO:0007049","GO:0006310"],"is_obsolete":false,"name":"meiotic DNA repair synthesis involved in reciprocal meiotic recombination","termid":"GO:0010778"}


id: GO:0098548
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the Golgi membrane that faces the cytoplasm.","definition_xrefs":["GOC:ab","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of membrane","termid":"GO:0098562"},{"relation_name":"part_of","term_name":"Golgi membrane","termid":"GO:0000139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005794","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cytoplasmic side of Golgi membrane","termid":"GO:0098548"}


id: GO:0031915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that increases synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic plasticity","termid":"GO:0048167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of synaptic plasticity","synonyms":[{"name":"activation of synaptic plasticity","type":"narrow"},{"name":"stimulation of synaptic plasticity","type":"narrow"},{"name":"up regulation of synaptic plasticity","type":"exact"},{"name":"up-regulation of synaptic plasticity","type":"exact"},{"name":"upregulation of synaptic plasticity","type":"exact"}],"termid":"GO:0031915"}


id: GO:0033939
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of alpha-D-(1->2)-(4-O-methyl)glucuronosyl links in the main chain of hardwood xylans.","definition_xrefs":["EC:3.2.1.131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"xylan alpha-1,2-glucuronosidase activity","secondary_identifiers":["MetaCyc:3.2.1.131-RXN"],"synonyms":[{"name":"1,2-alpha-glucuronidase activity","type":"related"},{"name":"alpha-(1->2)-glucuronidase activity","type":"related"},{"name":"xylan alpha-D-1,2-(4-O-methyl)glucuronohydrolase activity","type":"related"}],"termid":"GO:0033939"}


id: PBO:0069743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1024, pseudogene","termid":"PBO:0069743"}


id: PBO:0004368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3f","termid":"PBO:0004368"}


id: PBO:0051634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner mitochondrial membrane peptidase subunit 2","termid":"PBO:0051634"}


id: GO:1901561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a benomyl stimulus.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete response to benomyl (obsolete GO:1901561)","termid":"GO:1901561"}


id: PBO:0002007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA (guanine) methyltransferase (predicted)","termid":"PBO:0002007"}


id: PBO:0053496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 474","termid":"PBO:0053496"}


id: GO:0021681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cerebellar granule layer over time, from its formation to the mature structure. The granular layer is the innermost layer of the cerebellar cortex. This layer contains densely packed small neurons, mostly granule cells. Some Golgi cells are found at the outer border. Granule neurons send parallel fibers to the upper molecular layer, where they synapse with Purkinje cell dendrites. Mossy fibers from the pontine nuclei in the white matter synapse with granule cell axons, Golgi cell axons and unipolar brush interneuron axons at cerebellar glomeruli in the granule cell layer.","definition_xrefs":["GOC:dph","GOC:cls","GOC:jid","ISBN:0838580343","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"cerebellar cortex development","termid":"GO:0021695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar granular layer development","termid":"GO:0021681"}


id: PBO:0076487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TARDBP pseudogene 2","termid":"PBO:0076487"}


id: PBO:0030114
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_tRNA_processing","termid":"PBO:0030114"}


id: GO:0034843
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-oxoglutaryl-CoA + OH- = 2-oxoglutarate + CoASH.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-oxoglutaryl-CoA thioesterase activity (obsolete GO:0034843)","termid":"GO:0034843"}


id: PBO:0060024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 12","termid":"PBO:0060024"}


id: MONDO:0012875
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 18p11.","definition_xrefs":["DOID:0110906","PMID:17554261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"inflammatory bowel disease 21","secondary_identifiers":["UMLS:C2676507","OMIM:612354","MEDGEN:436705","MESH:C567338"],"synonyms":[{"name":"IBD21","type":"exact"},{"name":"inflammatory bowel disease 21","type":"exact"},{"name":"inflammatory bowel disease type 21","type":"exact"}],"termid":"MONDO:0012875","xrefs":{"Monarch":{"xref_id":"0012875"}}}


id: FYPO:0006353
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which RNAs transcribed from the centromere central core are present at greater levels than normal. Normally, the central core is not transcribed.","definition_xrefs":["PomBase:mah","PMID:23267073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased centromeric transcript level","termid":"FYPO:0004982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased centromere central core transcript level","synonyms":[{"name":"accumulation of centromere central core-derived RNA transcripts","type":"related"},{"name":"increased centromere central core RNA level","type":"exact"},{"name":"increased centromere central core-derived RNA accumulation","type":"related"},{"name":"increased centromere central core-derived RNA level during mitotic cell cycle","type":"related"},{"name":"increased centromere central core-derived RNA level during vegetative growth","type":"exact"},{"name":"increased centromere central core-derived RNA transcript level","type":"exact"},{"name":"increased centromeric core transcript level","type":"exact"}],"termid":"FYPO:0006353"}


id: GO:0034942
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cis-2-methyl-5-isopropylhexa-2,5-dienoic acid + ATP + CoASH = cis-2-methyl-5-isopropylhexa-2,5-dienoyl-CoA + AMP + PPi.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cis-2-methyl-5-isopropylhexa-2,5-dienoate-CoA ligase activity (obsolete GO:0034942)","termid":"GO:0034942"}


id: PBO:0067839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 141","termid":"PBO:0067839"}


id: PBO:0003446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II complex subunit Rpb4","termid":"PBO:0003446"}


id: GO:0003697
data:
  {"annotated_genes":["SJAG_02362","SJAG_00757","SJAG_00819","SJAG_01698","SJAG_00984","SJAG_04156","SJAG_02079","SJAG_02545","SJAG_00399","SJAG_04210","SJAG_01708","SJAG_03436","SJAG_00796","SJAG_05239","SJAG_00884","SJAG_02031","SJAG_02348","SJAG_02822","SJAG_03682","SJAG_01354","SJAG_02194","SJAG_05214","SJAG_03161","SJAG_01887","SJAG_01762","SJAG_04933","SJAG_00327","SJAG_02828","SJAG_02556","SJAG_00939","SJAG_03068","SJAG_01771","SJAG_00619","SJAG_00857","SJAG_03722","SJAG_04574","SJAG_01049","SJAG_02627","SJAG_03957","SJAG_01410","SJAG_04418","SJAG_04995","SJAG_00871","SJAG_02267","SJAG_01436","SJAG_00768","SJAG_04410","SJAG_01076","SJAG_01677","SJAG_03832","SJAG_04530","SJAG_02667","SJAG_04863","SJAG_03886","SJAG_03855","SJAG_04245","SJAG_03780","SJAG_03495","SJAG_02503"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87766,88532,89187,89283,89928,91451,92165,92759,95235,95673,95736,96927,98577,98578,98924,100054,100509,101007,101698,102460,102685,104451,104826,105923,106742,107159,108043,108578,109529,109721,109991,110315,110975,111047,111048,111547,111910,112887,113065,114147,114609,114783,115024,115189,115415,115756,116030,116309,116642,117094,117689,118268,118440],"is_not":false,"summary":null,"term":"GO:0003697"},{"annotations":[112018,115413,102683,112885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990814"},{"annotations":[94576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098505"},{"annotations":[107609,94577,114107,109866,95554,111049,111024,88657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043047"}]},"cv_name":"molecular_function","definition":"Binding to single-stranded DNA.","definition_xrefs":["GOC:elh","PMID:22976174","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":59,"genes_by_uniquename":{"SJAG_00327":null,"SJAG_00399":null,"SJAG_00619":null,"SJAG_00757":null,"SJAG_00768":null,"SJAG_00796":null,"SJAG_00819":null,"SJAG_00857":null,"SJAG_00871":null,"SJAG_00884":null,"SJAG_00939":null,"SJAG_00984":null,"SJAG_01049":null,"SJAG_01076":null,"SJAG_01354":null,"SJAG_01410":null,"SJAG_01436":null,"SJAG_01677":null,"SJAG_01698":null,"SJAG_01708":null,"SJAG_01762":null,"SJAG_01771":null,"SJAG_01887":null,"SJAG_02031":null,"SJAG_02079":null,"SJAG_02194":null,"SJAG_02267":null,"SJAG_02348":null,"SJAG_02362":null,"SJAG_02503":null,"SJAG_02545":null,"SJAG_02556":null,"SJAG_02627":null,"SJAG_02667":null,"SJAG_02822":null,"SJAG_02828":null,"SJAG_03068":null,"SJAG_03161":null,"SJAG_03436":null,"SJAG_03495":null,"SJAG_03682":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03832":null,"SJAG_03855":null,"SJAG_03886":null,"SJAG_03957":null,"SJAG_04156":null,"SJAG_04210":null,"SJAG_04245":null,"SJAG_04410":null,"SJAG_04418":null,"SJAG_04530":null,"SJAG_04574":null,"SJAG_04863":null,"SJAG_04933":null,"SJAG_04995":null,"SJAG_05214":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"single-stranded DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0003699","GO:0003698"],"synonyms":[{"name":"ssDNA binding","type":"exact"}],"termid":"GO:0003697","terms_by_termid":{"GO:0003697":null,"GO:0043047":null,"GO:0098505":null,"GO:1990814":null}}


id: PBO:0083098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-dependent ATPase; DNA recombination/repair translocase, supercoils DNA, promotes DNA strand opening; stimulates strand exchange by modifying dsDNA topology; involved in recombinational repair of DNA double-strand breaks (DSBs) during mitosis, meiosis; implicated in cell divisions in telomerase-negative strains through adaptation to DNA damage, which allows bypass of cell cycle arrest and contributes senescence-specific genome instability; phosphorylated in response to DNA damage","termid":"PBO:0083098"}


id: GO:0015974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of guanine pentaphosphate (5'-pppGpp-3'), a derivative of guanine riboside with five phosphates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"guanosine pentaphosphate metabolic process","termid":"GO:0015972"},{"relation_name":"is_a","term_name":"purine ribonucleoside bisphosphate catabolic process","termid":"GO:0034037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"guanosine pentaphosphate catabolic process","synonyms":[{"name":"guanosine pentaphosphate (5'-pppGpp-3') catabolic process","type":"exact"},{"name":"guanosine pentaphosphate (5'-pppGpp-3') catabolism","type":"exact"},{"name":"guanosine pentaphosphate breakdown","type":"exact"},{"name":"guanosine pentaphosphate catabolism","type":"exact"},{"name":"guanosine pentaphosphate degradation","type":"exact"}],"termid":"GO:0015974"}


id: PBO:0090325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lanosterol 14-demethylase (cytochrome P450) Erg11","termid":"PBO:0090325"}


id: GO:0046686
data:
  {"annotated_genes":["SJAG_00044","SJAG_04516","SJAG_02599","SJAG_03497","SJAG_01351","SJAG_00988","SJAG_01344"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96502,107919,117700,96858,92788,96540],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0098849"},{"annotations":[96503,92789,96859,107920,88357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071276"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cadmium (Cd) ion stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00988":null,"SJAG_01344":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_03497":null,"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cadmium ion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cadmium sensitivity/resistance","type":"related"},{"name":"response to cadmium","type":"exact"}],"termid":"GO:0046686","terms_by_termid":{"GO:0071276":null,"GO:0098849":null}}


id: GO:0019028
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles. It comprises numerous regularly arranged subunits, or capsomeres.","definition_xrefs":["GOC:mtg_sensu","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral capsid","secondary_identifiers":["Wikipedia:Capsid","GO:0046728"],"termid":"GO:0019028"}


id: FYPO:0002034
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA topoisomerase type I activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"abnormal DNA topoisomerase type I activity","termid":"FYPO:0002034"}


id: GO:0072307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metanephric nephron tubule epithelial cell differentiation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nephron tubule epithelial cell differentiation","termid":"GO:0072182"},{"relation_name":"regulates","term_name":"metanephric nephron tubule epithelial cell differentiation","termid":"GO:0072257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephric nephron tubule epithelial cell differentiation","termid":"GO:0072307"}


id: MONDO:0016139
data:
  {"annotated_genes":["SJAG_04053","SJAG_03188","SJAG_03379","SJAG_04316","SJAG_02431","SJAG_03145","SJAG_04167","SJAG_01491","SJAG_04887","SJAG_00185","SJAG_03025","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012248"},{"annotations":[86154,86153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013162"},{"annotations":[85435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014142"},{"annotations":[85032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010977"},{"annotations":[84776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008070"},{"annotations":[84825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800341"},{"annotations":[84650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012239"},{"annotations":[85371,85370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008409"},{"annotations":[85342,85340,85341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009364"},{"annotations":[85428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014140"},{"annotations":[86147,86148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013154"},{"annotations":[86152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013159"},{"annotations":[85433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014141"},{"annotations":[86150,86151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013160"},{"annotations":[84748,84747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008050"},{"annotations":[84964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009709"},{"annotations":[86210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009725"},{"annotations":[85355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012538"},{"annotations":[85286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014800"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00185":null,"SJAG_01491":null,"SJAG_02431":null,"SJAG_03025":null,"SJAG_03145":null,"SJAG_03188":null,"SJAG_03379":null,"SJAG_03703":null,"SJAG_04053":null,"SJAG_04167":null,"SJAG_04316":null,"SJAG_04887":null},"genotype_count":0,"is_obsolete":false,"name":"qualitative or quantitative protein defects in neuromuscular diseases","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:20388","UMLS:C5680807","MEDGEN:1842598","Orphanet:207049"],"termid":"MONDO:0016139","terms_by_termid":{"MONDO:0008050":null,"MONDO:0008070":null,"MONDO:0008409":null,"MONDO:0009364":null,"MONDO:0009709":null,"MONDO:0009725":null,"MONDO:0010977":null,"MONDO:0012239":null,"MONDO:0012248":null,"MONDO:0012538":null,"MONDO:0013154":null,"MONDO:0013159":null,"MONDO:0013160":null,"MONDO:0013162":null,"MONDO:0014140":null,"MONDO:0014141":null,"MONDO:0014142":null,"MONDO:0014800":null,"MONDO:0800341":null},"xrefs":{"Monarch":{"xref_id":"0016139"}}}


id: PBO:0030832
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_population_growth_during_iron_starvation","termid":"PBO:0030832"}


id: GO:0060883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that mediates interactions between a cell and its surroundings that modulates of the rate, frequency or extent of basement membrane disassembly involved in semicircular canal fusion.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of basement membrane disassembly involved in semicircular canal fusion by cell communication (obsolete GO:0060883)","synonyms":[{"name":"regulation of basal lamina disassembly involved in semicircular canal fusion by cell communication","type":"related"}],"termid":"GO:0060883"}


id: PBO:0045409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA3 pseudogene 11","termid":"PBO:0045409"}


id: MONDO:0004676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete progressive myoclonus epilepsy (obsolete MONDO:0004676)","termid":"MONDO:0004676","xrefs":{"Monarch":{"xref_id":"0004676"}}}


id: PBO:0072093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 24","termid":"PBO:0072093"}


id: PBO:0026817
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_during_nitrogen_starvation","termid":"PBO:0026817"}


id: GO:1900444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to biotic stimulus.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to biotic stimulus","termid":"GO:0002832"},{"relation_name":"is_a","term_name":"negative regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900429"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","termid":"GO:1900443"},{"relation_name":"negatively_regulates","term_name":"filamentous growth of a population of unicellular organisms in response to biotic stimulus","termid":"GO:0036180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","synonyms":[{"name":"down regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","type":"exact"},{"name":"down-regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","type":"exact"},{"name":"downregulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","type":"exact"},{"name":"inhibition of filamentous growth of a population of unicellular organisms in response to biotic stimulus","type":"narrow"}],"termid":"GO:1900444"}


id: PBO:0083136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dual-specificity protein phosphatase; maintains low levels of both basal and induced cell integrity pathway signaling by dephosphorylation of the Slt2p MAPK; reciprocally regulated by Slt2p through phosphorylation; minor role with Ptp2p in the adaptive response to pheromone through the dephosphorylation of the Fus3p MAPK with major contribution by Ptp3p; inhibits the nuclear accumulation of Fus3p; two isoforms exist as the result of alternative translation initiation starts","termid":"PBO:0083136"}


id: GO:0052042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont gene product activates host programmed cell death, leading to an increase in the frequency, rate or extent of programmed cell death in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host programmed cell death","termid":"GO:0052040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host programmed cell death","secondary_identifiers":["GO:0052044","GO:0012504","GO:0052153","GO:0052397","GO:0052400","GO:0052045"],"synonyms":[{"name":"activation by organism of host programmed cell death","type":"exact"},{"name":"activation by organism of non-apoptotic programmed cell death in other organism","type":"narrow"},{"name":"activation by organism of programmed cell death in other organism during symbiotic interaction","type":"exact"},{"name":"activation by symbiont of host programmed cell death","type":"narrow"},{"name":"enhancement of host programmed cell death","type":"exact"},{"name":"enhancement of host programmed cell death by organism","type":"exact"},{"name":"induction by organism of non-apoptotic programmed cell death in other organism during symbiotic interaction","type":"narrow"},{"name":"induction by organism of programmed cell death in other organism during symbiotic interaction","type":"related"},{"name":"induction by organism of programmed cell death in other organism involved in symbiotic interaction","type":"exact"},{"name":"induction by symbiont of host programmed cell death","type":"exact"},{"name":"induction of non-apoptotic programmed cell death by other organism","type":"related"},{"name":"pathogenesis","type":"related"},{"name":"positive regulation by symbiont of host non-apoptotic programmed cell death","type":"narrow"},{"name":"positive regulation by symbiont of host programmed cell death","type":"exact"},{"name":"stimulation by symbiont of host programmed cell death","type":"narrow"},{"name":"upregulation by symbiont of host programmed cell death","type":"exact"}],"termid":"GO:0052042"}


id: MONDO:1012073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple exostoses, non-human animal","termid":"MONDO:1011944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple exostoses, dog","secondary_identifiers":["OMIA:000354-9615"],"termid":"MONDO:1012073","xrefs":{"Monarch":{"xref_id":"1012073"}}}


id: GO:0031132
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + NADP+ = L-alpha-formylglycine + 2 H+ + NADPH.","definition_xrefs":["EC:1.1.1.276","RHEA:21596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"serine 3-dehydrogenase activity","secondary_identifiers":["Wikipedia:Serine_3-dehydrogenase","KEGG_REACTION:R06126","MetaCyc:RXN0-2201"],"synonyms":[{"name":"L-serine:NADP+ 3-oxidoreductase activity","type":"related"}],"termid":"GO:0031132"}


id: PBO:0052753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 45","termid":"PBO:0052753"}


id: PBO:0061088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK2 homeobox 6","termid":"PBO:0061088"}


id: MONDO:1010054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperparathyroidism that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperparathyroidism, non-human animal","secondary_identifiers":["OMIA:000508"],"termid":"MONDO:1010054","xrefs":{"Monarch":{"xref_id":"1010054"}}}


id: PBO:0087552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RNase MRP, nuclear RNase P and telomerase; forms a soluble heterodimer with Pop6p that binds P3 domain of RNase MRP and RNase P RNAs; RNase MRP cleaves pre-rRNA, nuclear RNase P cleaves tRNA precursors to generate mature 5' ends and facilitates turnover of nuclear RNAs, while telomerase replenishes telomeric DNA","termid":"PBO:0087552"}


id: GO:0035969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of sterol import by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","PMID:11533229"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sterol import by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0035969)","synonyms":[{"name":"positive regulation of sterol import by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol import by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of sterol import by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol import by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol import by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol import by upregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol influx by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol influx by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol influx by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol influx by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol influx by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol influx by upregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol uptake by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol uptake by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol uptake by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol uptake by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol uptake by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol uptake by upregulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0035969"}


id: GO:0004080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + biotin + apo-(propanoyl-CoA:carbon-dioxide ligase (ADP-forming)) = AMP + diphosphate + (propanoyl-CoA:carbon-dioxide ligase (ADP-forming)).","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete biotin-[propionyl-CoA-carboxylase (ATP-hydrolyzing)] ligase activity (obsolete GO:0004080)","termid":"GO:0004080"}


id: GO:0021964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the red nucleus of the midbrain towards target cells in the spinal cord.","definition_xrefs":["GOC:dgh","GOC:jid","GOC:dph","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rubrospinal tract morphogenesis","termid":"GO:0021964"}


id: GO:0016060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phospholipase C-activating phototransduction signaling pathway. Activated rhodopsin (R*) is inactivated by a two-step process: first, R* is phosphorylated by rhodopsin kinase which lowers the activity of R*. Second, the protein arrestin binds to phosphorylated R* to de-activate it.","definition_xrefs":["GOC:hb","PMID:8316831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of opsin-mediated signaling pathway","termid":"GO:0016059"},{"relation_name":"is_a","term_name":"negative regulation of phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:1900737"},{"relation_name":"negatively_regulates","term_name":"phospholipase C-activating opsin-mediated signaling pathway","termid":"GO:0030265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of phospholipase C-activating phototransduction signaling pathway","secondary_identifiers":["Wikipedia:Visual_phototransduction"],"synonyms":[{"name":"metarhodopsin inactivation","type":"narrow"}],"termid":"GO:0016060"}


id: SO:0000419
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The polypeptide sequence that remains when the cleaved peptide regions have been cleaved from the immature peptide.","definition_xrefs":["SO:cb","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"mature_protein_region_of_CDS","termid":"SO:0002249"},{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"},{"relation_name":"part_of","term_name":"immature_peptide_region","termid":"SO:0001063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"mature_protein_region","secondary_identifiers":["BS:00149"],"synonyms":[{"name":"INSDC_feature:mat_peptide","type":"exact"},{"name":"chain","type":"related"},{"name":"mature peptide","type":"related"},{"name":"mature protein region","type":"exact"}],"termid":"SO:0000419"}


id: GO:0046103
data:
  {"annotated_genes":["SJAG_03096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inosine metabolic process","termid":"GO:0046102"},{"relation_name":"is_a","term_name":"purine ribonucleoside biosynthetic process","termid":"GO:0046129"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"inosine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"inosine anabolism","type":"exact"},{"name":"inosine biosynthesis","type":"exact"},{"name":"inosine formation","type":"exact"},{"name":"inosine synthesis","type":"exact"}],"termid":"GO:0046103","terms_by_termid":{"GO:0006190":null}}


id: MOD:01558
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ8plex-117 reporter+balance group.","definition_xrefs":["Unimod:730#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-117 reporter+balance reagent acylated residue","termid":"MOD:01556"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"iTRAQ8plex-117 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01558"}


id: GO:0043686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of covalently altering one or more amino acids in a protein after translation has begun but before the protein has been released from the ribosome.","definition_xrefs":["GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"co-translational protein modification","synonyms":[{"name":"co-translational amino acid modification","type":"exact"},{"name":"co-translational modification","type":"exact"},{"name":"cotranslational amino acid modification","type":"exact"},{"name":"cotranslational modification","type":"exact"},{"name":"cotranslational protein modification","type":"exact"}],"termid":"GO:0043686"}


id: PBO:0074439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 40","termid":"PBO:0074439"}


id: GO:0140944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl20-[histone H4] + S-adenosyl-L-methionine = H+ + N6-methyl-L-lysyl20-[histone H4] + S-adenosyl-L-homocysteine. This reaction is the addition of a methyl group to the unmethylated lysine residue at position 20 of histone H4, producing histone H4K20me.","definition_xrefs":["RHEA:60344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4K20 methyltransferase activity","termid":"GO:0042799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0008276","GO:0140096","GO:0003824","GO:0003674","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"histone H4K20 monomethyltransferase activity","secondary_identifiers":["EC:2.1.1.361"],"synonyms":[{"name":"histone H4-K20 methylation","type":"broad"},{"name":"histone H4K20 methylase activity","type":"broad"},{"name":"histone H4K20 methylation","type":"broad"},{"name":"histone H4K20 monomethylation","type":"exact"},{"name":"histone lysine N-monomethyltransferase activity (H4-K20 specific)","type":"exact"}],"termid":"GO:0140944"}


id: GO:0007008
data:
  {"annotated_genes":["SJAG_05268","SJAG_02361","SJAG_01780","SJAG_01951","SJAG_00569","SJAG_03416","SJAG_02034","SJAG_03502","SJAG_02355","SJAG_02797"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100023],"is_not":false,"summary":null,"term":"GO:0007008"},{"annotations":[109900,90385],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070096"},{"annotations":[107058,109540,98083,111284,89849,109891,90387,109901,97732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045040"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the mitochondrial outer membrane.","definition_xrefs":["GOC:ai","GOC:mah","GOC:jl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial membrane organization","termid":"GO:0007006"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00569":null,"SJAG_01780":null,"SJAG_01951":null,"SJAG_02034":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_02797":null,"SJAG_03416":null,"SJAG_03502":null,"SJAG_05268":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0007005"],"is_obsolete":false,"name":"outer mitochondrial membrane organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"outer mitochondrial membrane organisation","type":"exact"},{"name":"outer mitochondrial membrane organization and biogenesis","type":"related"}],"termid":"GO:0007008","terms_by_termid":{"GO:0007008":null,"GO:0045040":null,"GO:0070096":null}}


id: GO:0016929
data:
  {"annotated_genes":["SJAG_16454","SJAG_02214"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89747,105621],"is_not":false,"summary":null,"term":"GO:0016929"}]},"cv_name":"molecular_function","definition":"An thiol-dependent isopeptidase activity that cleaves SUMO from a target protein to which it is conjugated.","definition_xrefs":["PMID:10094048","PMID:23746258","PMID:11265250","GOC:rn","PMID:11031248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type peptidase activity","termid":"GO:0008234"},{"relation_name":"is_a","term_name":"ubiquitin-like protein peptidase activity","termid":"GO:0019783"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02214":null,"SJAG_16454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0140096","GO:0003824","GO:0008233","GO:0003674"],"is_obsolete":false,"name":"deSUMOylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0070140"],"synonyms":[{"name":"SUMO-specific isopeptidase activity","type":"exact"},{"name":"SUMO-specific protease activity","type":"exact"},{"name":"SUSP","type":"narrow"},{"name":"ULP","type":"narrow"}],"termid":"GO:0016929","terms_by_termid":{"GO:0016929":null}}


id: PBO:0071330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 7","termid":"PBO:0071330"}


id: GO:0007607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events required for the chemical composition of a soluble stimulus to be received and converted to a molecular signal.","definition_xrefs":["GOC:jl","ISBN:0395825172"],"gene_count":0,"genotype_count":0,"name":"obsolete taste perception (obsolete GO:0007607)","synonyms":[{"name":"taste perception","type":"exact"}],"termid":"GO:0007607"}


id: PBO:0044879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 6A","termid":"PBO:0044879"}


id: GO:0010934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a macrophage cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rl","GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte cytokine production","termid":"GO:0061082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"macrophage cytokine production","termid":"GO:0010934"}


id: GO:0005504
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a fatty acid, an aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid binding","termid":"GO:0008289"},{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"fatty acid binding","termid":"GO:0005504"}


id: GO:0048466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the androecium over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral whorl development","termid":"GO:0048438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"androecium development","termid":"GO:0048466"}


id: GO:0003730
data:
  {"annotated_genes":["SJAG_02036","SJAG_00686","SJAG_04818","SJAG_03476","SJAG_04880","SJAG_01222","SJAG_00391","SJAG_04427","SJAG_03696","SJAG_04084","SJAG_16457","SJAG_04682","SJAG_04824","SJAG_00670","SJAG_01650","SJAG_04825","SJAG_00759","SJAG_01813","SJAG_03283","SJAG_03853","SJAG_04271","SJAG_03214","SJAG_04946"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72493,74163,87883,88964,89177,96602,97636,98013,99592,107211,111064,114643,117816,118415],"is_not":false,"summary":null,"term":"GO:0003730"},{"annotations":[114197,117815,78246,104763,110561,109429,117808,112821,104410,103914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035925"}]},"cv_name":"molecular_function","definition":"Binding to a 3' untranslated region of an mRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA binding","termid":"GO:0003729"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00391":null,"SJAG_00670":null,"SJAG_00686":null,"SJAG_00759":null,"SJAG_01222":null,"SJAG_01650":null,"SJAG_01813":null,"SJAG_02036":null,"SJAG_03214":null,"SJAG_03283":null,"SJAG_03476":null,"SJAG_03696":null,"SJAG_03853":null,"SJAG_04084":null,"SJAG_04271":null,"SJAG_04427":null,"SJAG_04682":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04825":null,"SJAG_04880":null,"SJAG_04946":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"mRNA 3'-UTR binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mRNA 3' UTR binding","type":"exact"}],"termid":"GO:0003730","terms_by_termid":{"GO:0003730":null,"GO:0035925":null}}


id: PBO:0090907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG family molecular chaperone regulator Bag101","termid":"PBO:0090907"}


id: PATO:0002423
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A round or lobulated protruding form resembling a nipple.","definition_xrefs":["PATOC:MPATH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillomatous","termid":"PATO:0002423"}


id: GO:0070139
data:
  {"annotated_genes":["SJAG_16454","SJAG_02214"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89748,105622],"is_not":false,"summary":null,"term":"GO:0070139"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of peptide bonds between an alpha-carboxyl group and an alpha-amino group within the small conjugating protein SUMO.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein-specific endopeptidase activity","termid":"GO:0070137"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02214":null,"SJAG_16454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0008233","GO:0140096","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"SUMO-specific endopeptidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2993763","Reactome:R-HSA-2990840","Reactome:R-HSA-2990842"],"termid":"GO:0070139","terms_by_termid":{"GO:0070139":null}}


id: MONDO:0020810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital multiple café-au-lait macules-increased sister chromatid exchange syndrome (obsolete MONDO:0020810)","termid":"MONDO:0020810","xrefs":{"Monarch":{"xref_id":"0020810"}}}


id: PBO:0058945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIX23 pseudogene 4","termid":"PBO:0058945"}


id: PBO:0046536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group 9 member 1","termid":"PBO:0046536"}


id: GO:0090482
data:
  {"annotated_genes":["SJAG_00835","SJAG_03652","SJAG_02779","SJAG_04673","SJAG_03503","SJAG_02780","SJAG_02962","SJAG_05175"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91546,71318],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015225"},{"annotations":[107053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008517"},{"annotations":[100176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034216"},{"annotations":[107775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015233"},{"annotations":[103139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090422"},{"annotations":[89631,89630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015234"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a vitamin from one side of a membrane to the other.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00835":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02962":null,"SJAG_03503":null,"SJAG_03652":null,"SJAG_04673":null,"SJAG_05175":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"vitamin transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0051183"],"synonyms":[{"name":"vitamin or cofactor transporter activity","type":"broad"},{"name":"vitamin transporter activity","type":"related"}],"termid":"GO:0090482","terms_by_termid":{"GO:0008517":null,"GO:0015225":null,"GO:0015233":null,"GO:0015234":null,"GO:0034216":null,"GO:0090422":null}}


id: PR:O94360
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mob1 gene.","definition_xrefs":["UniProtKB:O94360","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maintenance of ploidy protein mob1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.13c","synonyms":[{"name":"Spom972h-mob1","type":"exact"}],"termid":"PR:O94360"}


id: PBO:0051950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPKB intronic transcript 1","termid":"PBO:0051950"}


id: PBO:0047519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FEZF1 antisense RNA 1","termid":"PBO:0047519"}


id: RO:0002223
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of starts with","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"},{"relation_name":"is_a","term_name":"temporally_related_to","termid":"RO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"starts","termid":"RO:0002223"}


id: PBO:0018173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP(CTP) tRNA nucleotidyltransferase Cca2 (predicted)","termid":"PBO:0018173"}


id: PBO:0050949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha and beta receptor subunit 1","termid":"PBO:0050949"}


id: PBO:0043356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clarin 2","termid":"PBO:0043356"}


id: PBO:0058481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5588","termid":"PBO:0058481"}


id: GO:0018852
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4-dichloro-2,5-dihydro-5-oxofuran-2-acetate = 2,4-dichloro-cis,cis-muconate.","definition_xrefs":["EC:5.5.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"dichloromuconate cycloisomerase activity","secondary_identifiers":["UM-BBD_reactionID:r0277","RHEA:17437","MetaCyc:RXN-9856"],"synonyms":[{"name":"2,4-dichloro-2,5-dihydro-5-oxofuran-2-acetate lyase (decyclizing)","type":"related"}],"termid":"GO:0018852"}


id: GO:0016325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation and maintenance of a polarized microtubule array originating from a microtubule-organizing center (MTOC) in the oocyte. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:11231123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of microtubule cytoskeleton polarity","termid":"GO:0030951"},{"relation_name":"part_of","term_name":"oocyte construction","termid":"GO:0007308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007163","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"oocyte microtubule cytoskeleton organization","secondary_identifiers":["GO:0048130"],"synonyms":[{"name":"oocyte microtubule cytoskeleton organisation","type":"exact"}],"termid":"GO:0016325"}


id: SO:0002038
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding an shRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shRNA_primary_transcript","synonyms":[{"name":"shRNA primary transcript","type":"exact"}],"termid":"SO:0002038"}


id: PBO:0062037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 6","termid":"PBO:0062037"}


id: FYPO:0004941
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the glycan moiety of a glycoprotein contains a lower amount of mannose residues than normal. In wild-type cells, glycoprotein glycans contain mannose and galactose residues in a 1:1.2 ratio.","definition_xrefs":["PomBase:mah","PMID:8782411","PMID:11015724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glycoprotein glycan structure","termid":"FYPO:0003290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0003290"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001320","FYPO:0001985","FYPO:0002494","FYPO:0003290","FYPO:0005447"],"is_obsolete":false,"name":"decreased mannose level in glycoprotein glycan","synonyms":[{"name":"decreased mannose level in glycoprotein oligosaccharide","type":"related"},{"name":"reduced mannose level in glycoprotein glycan","type":"exact"}],"termid":"FYPO:0004941"}


id: GO:0050521
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [(1->4)-alpha-D-glucosyl](n) + n ATP + n H2O = [(1->4)-6-phospho-alpha-D-glucosyl](n) + n AMP + 2n H+ + n phosphate.","definition_xrefs":["RHEA:11668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, paired acceptors","termid":"GO:0016781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"alpha-glucan, water dikinase activity","secondary_identifiers":["EC:2.7.9.4","MetaCyc:2.7.9.4-RXN"],"synonyms":[{"name":"ATP:alpha-glucan, water phosphotransferase activity","type":"related"},{"name":"GWD","type":"related"},{"name":"a-glucan, water dikinase activity","type":"exact"},{"name":"alpha-glucan,water dikinase activity","type":"related"},{"name":"starch-related R1 protein activity","type":"related"}],"termid":"GO:0050521"}


id: PBO:0082061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyanthranilic acid dioxygenase; required for the de novo biosynthesis of NAD from tryptophan via kynurenine; expression regulated by Hst1p","termid":"PBO:0082061"}


id: PR:O60086
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ilv6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetolactate synthase small subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.04","synonyms":[{"name":"AHAS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ALS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ilv6","type":"exact"},{"name":"acetohydroxy-acid synthase small subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60086"}


id: MONDO:1010133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acrodermatitis enteropathica that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrodermatitis enteropathica, non-human animal","secondary_identifiers":["OMIA:000593"],"termid":"MONDO:1010133","xrefs":{"Monarch":{"xref_id":"1010133"}}}


id: MONDO:0014848
data:
  {"annotated_genes":["SJAG_00112"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85117],"is_not":false,"summary":null,"term":"MONDO:0014848"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic urogenital tract malformation (obsolete MONDO:0015620)","termid":"MONDO:0015620"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic corneal dystrophy (obsolete MONDO:0020215)","termid":"MONDO:0020215"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic retinitis pigmentosa (obsolete MONDO:0020240)","termid":"MONDO:0020240"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"partial monosomy of the long arm of chromosome 9","termid":"MONDO:0016908"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00112":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0020022","MONDO:0002320"],"is_obsolete":false,"name":"TELO2-related intellectual disability-neurodevelopmental disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17898","MEDGEN:934745","OMIM:616954","Orphanet:488642","UMLS:C4310778"],"synonyms":[{"name":"YHFS","type":"related"},{"name":"you-Hoover-Fong syndrome","type":"exact"}],"termid":"MONDO:0014848","terms_by_termid":{"MONDO:0014848":null},"xrefs":{"Monarch":{"xref_id":"0014848"}}}


id: PBO:0086372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative aryl-alcohol dehydrogenase; involved in oxidative stress response; similar to P. chrysosporium aryl-alcohol dehydrogenase; expression induced in cells treated with the mycotoxin patulin; members of the AAD gene family comprise three pairs (AAD3 + AAD15, AAD6/AAD16 + AAD4, AAD10 + AAD14) whose two genes are more related to one another than to other members of the family","termid":"PBO:0086372"}


id: PBO:0026789
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_heterothallic_h-_cells","termid":"PBO:0026789"}


id: PBO:0045654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 12","termid":"PBO:0045654"}


id: MONDO:0013006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An isolated growth hormone deficiency characterized by autosomal recessive inheritance of low but detectable levels of GH, short stature, significantly retarded bone age, and a positive response and immunologic tolerance to growth hormone therapy that has material basis in mutation in the GH1 or GHRHR genes on chromosomes 17q23.3 and 7p14.3, respectively.","definition_xrefs":["PMID:8528260","PMID:10678654","PMID:8288694","DOID:0060874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated congenital growth hormone deficiency","termid":"MONDO:0000050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"isolated growth hormone deficiency type IB","secondary_identifiers":["UMLS:C2748571","MEDGEN:411242","GARD:3919","MESH:C567564","Orphanet:231671","OMIM:612781"],"synonyms":[{"name":"IGHD 1B","type":"related"},{"name":"IGHD IB","type":"exact"},{"name":"IGHD1B","type":"related"},{"name":"congenital IGHD type IB","type":"exact"},{"name":"congenital isolated GH deficiency type IB","type":"exact"},{"name":"congenital isolated growth hormone deficiency type IB","type":"exact"},{"name":"dwarfism of Sindh","type":"exact"},{"name":"growth hormone deficiency, isolated, type IB","type":"exact"},{"name":"isolated Growth hormone deficiency, type 1B","type":"related"},{"name":"isolated growth hormone deficiency type 1B","type":"related"},{"name":"isolated growth hormone deficiency, type IB","type":"related"}],"termid":"MONDO:0013006","xrefs":{"Monarch":{"xref_id":"0013006"}}}


id: PBO:0005044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set3 complex subunit Hif2","termid":"PBO:0005044"}


id: PBO:0074208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 41 member 1","termid":"PBO:0074208"}


id: PBO:0110069
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously annotated as ortholog of human WDR54","termid":"PBO:0110069"}


id: GO:0016422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + m(7)G(5')pppAm = S-adenosyl-L-homocysteine + m(7)G(5')pppm(6)Am.","definition_xrefs":["EC:2.1.1.62"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA methyltransferase activity","termid":"GO:0008174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0140098","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.62-RXN","RHEA:22744"],"synonyms":[{"name":"S-adenosyl-L-methionine:mRNA (2'-O-methyladenosine-6-N-)-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity","type":"related"},{"name":"messenger ribonucleate 2'-O-methyladenosine NG-methyltransferase activity","type":"related"}],"termid":"GO:0016422"}


id: PBO:0089904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ThiJ domain protein, implicated in cellular detoxification","termid":"PBO:0089904"}


id: GO:1904499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of chromatin-mediated maintenance of transcription.","definition_xrefs":["GOC:BHF_telomere","GOC:BHF","GO_REF:0000058","GOC:nc","PMID:22723415","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of chromatin-mediated maintenance of transcription (obsolete GO:1904499)","termid":"GO:1904499"}


id: GO:0048443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the stamen over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ development","termid":"GO:0048437"},{"relation_name":"is_a","term_name":"phyllome development","termid":"GO:0048827"},{"relation_name":"part_of","term_name":"androecium development","termid":"GO:0048466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stamen development","secondary_identifiers":["GO:0048425"],"termid":"GO:0048443"}


id: GO:0005607
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha2, beta1 and gamma1 polypeptide chains.","definition_xrefs":["GOC:jl","PMID:10842354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"laminin-2 complex","synonyms":[{"name":"laminin-211 complex","type":"exact"}],"termid":"GO:0005607"}


id: MONDO:0000764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any corneal dystrophy (disease) in which the cause of the disease is a mutation in the TGFBI gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"corneal dystrophy","termid":"MONDO:0018102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"epithelial-stromal TGFBI dystrophy","secondary_identifiers":["DOID:0060441"],"synonyms":[{"name":"TGFBI corneal dystrophy (disease)","type":"exact"},{"name":"corneal dystrophy (disease) caused by mutation in TGFBI","type":"exact"}],"termid":"MONDO:0000764","xrefs":{"Monarch":{"xref_id":"0000764"}}}


id: FYPO:0006231
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of translational initiation in the cytoplasm is decreased during a cellular response to osmotic stress.","definition_xrefs":["PMID:16278445","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cytoplasmic translational initiation","termid":"FYPO:0003125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"decreased cytoplasmic translational initiation during cellular response to osmotic stress","synonyms":[{"name":"decreased cytoplasmic translation initiation during cellular response to osmotic stress","type":"exact"},{"name":"decreased cytoplasmic translational initiation during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"decreased cytoplasmic translational initiation during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"reduced cytoplasmic translational initiation during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0006231"}


id: PBO:0044146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitobiase","termid":"PBO:0044146"}


id: SO:0000145
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A codon that has been redefined at translation. The redefinition may be as a result of translational bypass, translational frameshifting or stop codon readthrough.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"codon","termid":"SO:0000360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recoded_codon","synonyms":[{"name":"recoded codon","type":"exact"}],"termid":"SO:0000145"}


id: PBO:0030018
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-thin_cell","termid":"PBO:0030018"}


id: MONDO:0017444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"congenital absence of both lower leg and foot","secondary_identifiers":["GARD:21195","Orphanet:294981","SCTID:278532000","UMLS:C0431991","ICD10CM:Q72.2","icd11.foundation:835905199","MEDGEN:609276"],"synonyms":[{"name":"tibiofibular terminal transverse meromelia","type":"exact"}],"termid":"MONDO:0017444","xrefs":{"Monarch":{"xref_id":"0017444"}}}


id: GO:1905769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of double-stranded telomeric DNA binding.","definition_xrefs":["GOC:TermGenie","GOC:nc","GOC:BHF","PMID:18812185","GO_REF:0000059","GOC:BHF_telomere"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of double-stranded telomeric DNA binding (obsolete GO:1905769)","synonyms":[{"name":"activation of double-stranded telomeric DNA binding","type":"narrow"},{"name":"up regulation of double-stranded telomeric DNA binding","type":"exact"},{"name":"up-regulation of double-stranded telomeric DNA binding","type":"exact"},{"name":"upregulation of double-stranded telomeric DNA binding","type":"exact"}],"termid":"GO:1905769"}


id: PR:Q9US45
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mediator of RNA polymerase II transcription subunit 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13104:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.15c","secondary_identifiers":["UniProtKB:Q9US45"],"synonyms":[{"name":"RNA polymerase II mediator complex protein pmc5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC1002.15c","type":"related"},{"name":"Spom972h-MED6","type":"exact"},{"name":"mediator complex subunit 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pmc5","type":"related"}],"termid":"PR:Q9US45"}


id: GO:0008159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity that increases the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule following transcription initiation.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive transcription elongation factor activity (obsolete GO:0008159)","synonyms":[{"name":"positive transcription elongation factor activity","type":"exact"}],"termid":"GO:0008159"}


id: GO:0003825
data:
  {"annotated_genes":["SJAG_01531","SJAG_00129","SJAG_01427"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92829,96011,100558],"is_not":false,"summary":null,"term":"GO:0003825"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + D-glucose-6-phosphate = UDP + alpha,alpha-trehalose-6-phosphate.","definition_xrefs":["EC:2.4.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_01427":null,"SJAG_01531":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:TREHALOSE6PSYN-RXN","RHEA:18889"],"synonyms":[{"name":"UDP-glucose-glucose-phosphate glucosyltransferase activity","type":"exact"},{"name":"UDP-glucose-glucosephosphate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:D-glucose-6-phosphate 1-alpha-D-glucosyltransferase activity","type":"exact"},{"name":"UDPglucose-glucose-phosphate glucosyltransferase activity","type":"related"},{"name":"UDPglucose:D-glucose-6-phosphate 1-alpha-D-glucosyltransferase activity","type":"related"},{"name":"alpha,alpha-trehalose phosphate synthase (UDP-forming)","type":"related"},{"name":"phosphotrehalose-uridine diphosphate transglucosylase activity","type":"related"},{"name":"transglucosylase activity","type":"exact"},{"name":"trehalose 6-phosphate synthase activity","type":"exact"},{"name":"trehalose 6-phosphate synthetase activity","type":"exact"},{"name":"trehalose phosphate synthase activity","type":"related"},{"name":"trehalose phosphate synthetase activity","type":"related"},{"name":"trehalose phosphate-uridine diphosphate glucosyltransferase activity","type":"related"},{"name":"trehalose-P synthetase activity","type":"related"},{"name":"trehalose-phosphate synthase activity","type":"exact"},{"name":"trehalose-phosphate synthetase activity","type":"exact"},{"name":"trehalosephosphate-UDP glucosyl transferase activity","type":"exact"},{"name":"trehalosephosphate-UDP glucosyltransferase activity","type":"exact"},{"name":"uridine diphosphoglucose phosphate glucosyltransferase activity","type":"related"}],"termid":"GO:0003825","terms_by_termid":{"GO:0003825":null}}


id: SO:0000088
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene located in mitochondrial sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"mitochondrial_sequence","termid":"SO:0000737"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mt_gene","secondary_identifiers":["http://en.wikipedia.org/wiki/Mitochondrial_gene"],"synonyms":[{"name":"mitochondrial gene","type":"exact"},{"name":"mt gene","type":"exact"}],"termid":"SO:0000088"}


id: MONDO:0015431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 10 syndrome is characterized by intellectual deficit, growth retardation, and various dysmorphic features. Less than 20 cases have been described. The main features are low birth weight, microcephaly, stubby nose with a prominent nasal bridge, hypertelorism, strabismus, wide-set nipples, single transverse palmar creases, and clinodactyly. Boys have undescended testes and hypoplastic scrotum. Congenital heart disease, hydronephrosis or renal hypoplasia was present in some of the cases.","definition_xrefs":["Orphanet:1438"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"chromosome 10 disorder","termid":"MONDO:0700017"},{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 10","secondary_identifiers":["GARD:1322","SCTID:86997002","MESH:C538086","MEDGEN:539252","UMLS:C0265438"],"synonyms":[{"name":"Ring 10","type":"related"},{"name":"Ring chromosome 10 syndrome","type":"related"},{"name":"Ring chromosome type 10","type":"exact"},{"name":"chromosome 10 ring","type":"related"},{"name":"r10","type":"related"}],"termid":"MONDO:0015431","xrefs":{"Monarch":{"xref_id":"0015431"}}}


id: GO:0002060
data:
  {"annotated_genes":["SJAG_01859"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002055"}]},"cv_name":"molecular_function","definition":"Binding to a purine nucleobase, an organic nitrogenous base with a purine skeleton.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase binding","termid":"GO:0002054"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"purine nucleobase binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine base binding","type":"exact"},{"name":"purine binding","type":"related"}],"termid":"GO:0002060","terms_by_termid":{"GO:0002055":null}}


id: GO:0047660
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-amidino-L-aspartate + H2O = L-aspartate + urea.","definition_xrefs":["EC:3.5.3.14","RHEA:14849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"amidinoaspartase activity","secondary_identifiers":["MetaCyc:AMIDINOASPARTASE-RXN","KEGG_REACTION:R00777"],"synonyms":[{"name":"N-amidino-L-aspartate amidinohydrolase activity","type":"related"},{"name":"amidinoaspartic amidinohydrolase activity","type":"related"}],"termid":"GO:0047660"}


id: PBO:0002123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CorA family magnesium ion transporter","termid":"PBO:0002123"}


id: PBO:0045700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain Tctex-type family member 5","termid":"PBO:0045700"}


id: PBO:0059270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L34","termid":"PBO:0059270"}


id: MONDO:0001812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"blepharitis","termid":"MONDO:0004785"},{"relation_name":"is_a","term_name":"parasitic eye infection","termid":"MONDO:0020947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"parasitic eyelid infestation","secondary_identifiers":["MEDGEN:509836","ICD9:373.6","DOID:13823","SCTID:193922006","UMLS:C0155183"],"synonyms":[{"name":"parasitic eyelid infestation","type":"exact"},{"name":"parasitic infestation of eyelid","type":"exact"}],"termid":"MONDO:0001812","xrefs":{"Monarch":{"xref_id":"0001812"}}}


id: PBO:0067546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 692, pseudogene","termid":"PBO:0067546"}


id: PBO:0048062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 11","termid":"PBO:0048062"}


id: GO:0120296
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dopamine + L-glutaminyl-[protein] = 5-dopaminyl-L-glutamyl-[protein] + NH4(+).","definition_xrefs":["PMID:32273471","PMID:22858378","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"peptide dopaminyltransferase activity","secondary_identifiers":["RHEA:66556"],"termid":"GO:0120296"}


id: PATO:0000359
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000359 water content value (obsolete PATO:0000359)","termid":"PATO:0000359"}


id: MONDO:0024617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-Langerhans cell histiocytosis","termid":"MONDO:0015531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"xanthogranuloma","secondary_identifiers":["SCTID:189099001","NCIT:C27302","UMLS:C5234857","MEDGEN:1717859"],"synonyms":[{"name":"xanthogranuloma","type":"exact"}],"termid":"MONDO:0024617","xrefs":{"Monarch":{"xref_id":"0024617"}}}


id: PBO:0088242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-polyphosphate 5-phosphatase, synaptojanin homolog 1","termid":"PBO:0088242"}


id: GO:0097256
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-3-phenyllactate + NAD+ = 3-phenylpyruvate + H+ + NADH.","definition_xrefs":["GOC:pde","PMID:10849007","RHEA:38351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"phenyllactate dehydrogenase (NAD+) activity","termid":"GO:0097256"}


id: PBO:0068546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 152, pseudogene","termid":"PBO:0068546"}


id: PBO:0056064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper protein 4 pseudogene 1","termid":"PBO:0056064"}


id: PBO:0004221
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mago Nashi Interacting protein","termid":"PBO:0004221"}


id: GO:0019649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pathways in which formaldehyde is processed and used as a carbon source for the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formaldehyde metabolic process","termid":"GO:0046292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"formaldehyde assimilation","termid":"GO:0019649"}


id: PBO:0036041
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_ubiquitinated_protein_in_cell_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0036041"}


id: PBO:0001273
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lowe syndrome","termid":"PBO:0001273"}


id: PBO:0058129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4431","termid":"PBO:0058129"}


id: PBO:0080416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 subunit of GARP complex","termid":"PBO:0080416"}


id: MONDO:0013389
data:
  {"annotated_genes":["SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86515],"is_not":false,"summary":null,"term":"MONDO:0013389"}]},"cv_name":"mondo","definition":"An extremely rare nervous system disorder. Infants with EIEE12 develop very frequent epileptic seizures. Seizures present within the first days to months of life. Seizures may trigger eye rolling, eyelid fluttering, lip smacking, drooling, bluish coloring around the mouth, limpness, or muscle stiffening (particularly those in his or her back, legs, and arms). The seizures associated with this disease are difficult to treat and the syndrome is severely progressive. EIEE12 occurs when a child inherits two mutations in the PLCB1 gene (one from each parent). EIEE12 is inherited in an autosomal recessive fashion.","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant migrating partial seizures of infancy","termid":"MONDO:0017385"},{"relation_name":"is_a","term_name":"West syndrome","termid":"MONDO:0018097"},{"relation_name":"is_a","term_name":"neonatal-onset developmental and epileptic encephalopathy","termid":"MONDO:0100455"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 12","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080459","OMIM:613722","UMLS:C3150988","GARD:13318","MEDGEN:462338"],"synonyms":[{"name":"DEE12","type":"exact"},{"name":"EIEE12","type":"exact"},{"name":"PLCB1 early infantile epileptic encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 12","type":"exact"},{"name":"developmental and epileptic encephalopathy, 12","type":"exact"},{"name":"early infantile epileptic encephalopathy 12","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in PLCB1","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 12","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 12","type":"exact"}],"termid":"MONDO:0013389","terms_by_termid":{"MONDO:0013389":null},"xrefs":{"Monarch":{"xref_id":"0013389"}}}


id: GO:0033787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cob(I)alamin + hydrogen cyanide + NADP+ = cyanocob(III)alamin + H+ + NADPH.","definition_xrefs":["RHEA:16113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on metal ions, NAD or NADP as acceptor","termid":"GO:0016723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"cyanocobalamin reductase (cyanide-eliminating) (NADP+) activity","secondary_identifiers":["EC:1.16.1.6","KEGG_REACTION:R02999","MetaCyc:1.6.99.12-RXN","Reactome:R-HSA-3149519"],"synonyms":[{"name":"NADPH2:cyanocob(III)alamin oxidoreductase (cyanide-eliminating) activity","type":"related"},{"name":"NADPH:cyanocob(III)alamin oxidoreductase (cyanide-eliminating) activity","type":"related"},{"name":"cob(I)alamin, cyanide:NADP+ oxidoreductase activity","type":"related"},{"name":"cyanocobalamin reductase (NADPH, cyanide-eliminating) activity","type":"related"},{"name":"cyanocobalamin reductase (NADPH; CN-eliminating) activity","type":"related"},{"name":"cyanocobalamin reductase activity","type":"related"}],"termid":"GO:0033787"}


id: PBO:0075911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 3","termid":"PBO:0075911"}


id: PBO:0050316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 18","termid":"PBO:0050316"}


id: GO:0018949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving m-xylene, (1,3-dimethylbenzene) a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylene metabolic process","termid":"GO:0018948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"m-xylene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:mxy"],"synonyms":[{"name":"m-xylene metabolism","type":"exact"},{"name":"meta-xylene metabolic process","type":"exact"},{"name":"meta-xylene metabolism","type":"exact"}],"termid":"GO:0018949"}


id: PBO:0074928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 96A","termid":"PBO:0074928"}


id: FYPO:0002332
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the Golgi apparatus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to Golgi apparatus","synonyms":[{"name":"normal protein localisation to Golgi apparatus","type":"exact"},{"name":"normal protein localization to Golgi apparatus during mitotic cell cycle","type":"related"},{"name":"normal protein localization to Golgi apparatus during vegetative growth","type":"exact"}],"termid":"FYPO:0002332"}


id: GO:0060493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from a mesenchymal cell to an endodermal cell in the foregut and contributes to the formation of the lung bud.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inductive mesenchymal-endodermal cell signaling","termid":"GO:0060494"},{"relation_name":"is_a","term_name":"mesenchymal-epithelial cell signaling involved in lung development","termid":"GO:0060496"},{"relation_name":"is_a","term_name":"mesenchymal-endodermal cell signaling","termid":"GO:0060497"},{"relation_name":"part_of","term_name":"lung induction","termid":"GO:0060492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"mesenchymal-endodermal cell signaling involved in lung induction","synonyms":[{"name":"mesenchymal-endodermal cell signalling involved in lung induction","type":"exact"}],"termid":"GO:0060493"}


id: PBO:0047222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 226 member B","termid":"PBO:0047222"}


id: GO:1990418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin-like growth factor stimulus.","definition_xrefs":["PMID:21932665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to insulin-like growth factor stimulus","termid":"GO:1990418"}


id: PBO:0087611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the COMPASS (Set1C) histone H3K4 methyltransferase complex; required for Set1C stability and optimal activity; COMPASS methylates histone H3 on lys 4 and is involved in telomeric silencing; subunit of CPF (cleavage and polyadenylation factor), a complex involved in RNAP II transcription termination","termid":"PBO:0087611"}


id: MONDO:0015614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermatitis herpetiformis (DH) is a chronic autoimmune subepidermal bullous disease characterized by grouped pruritic lesions such as papules, urticarial plaques, erythema, and herpetiform vesiculae, with a predominantly symmetrical distribution on extensor surfaces of the elbows (90%), knees (30%), shoulders, buttocks, sacral region, and face of children and adults. Erosions, excoriations and hyperpigmentation usually follow. DH may also appear as a consequence of gluten intolerance.","definition_xrefs":["Orphanet:1656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune bullous skin disease","termid":"MONDO:0019337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"dermatitis herpetiformis","secondary_identifiers":["DOID:8505","EFO:1000684","UMLS:C0011608","Wikipedia:Dermatitis_herpetiformis","MedDRA:10012468","MEDGEN:8327","icd11.foundation:286313127","NCIT:C26742","GARD:10075","ICD10CM:L13.0","MESH:D003874","SCTID:111196000","ICD9:694.0"],"synonyms":[{"name":"Duhring's disease","type":"exact"},{"name":"Durhing-Brocq disease","type":"exact"},{"name":"dermatitis herpetiformis","type":"exact"},{"name":"dermatosis herpetiformis","type":"exact"}],"termid":"MONDO:0015614","xrefs":{"Monarch":{"xref_id":"0015614"}}}


id: PBO:0045987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EI24 pseudogene 1","termid":"PBO:0045987"}


id: GO:0019205
data:
  {"annotated_genes":["SJAG_02038","SJAG_02680","SJAG_04693","SJAG_00533","SJAG_00956","SJAG_02887","SJAG_01791","SJAG_01070","SJAG_04849","SJAG_01979","SJAG_03789","SJAG_03708","SJAG_04657","SJAG_03798","SJAG_00779"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004127"},{"annotations":[116337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004001"},{"annotations":[97624,118107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004017"},{"annotations":[87605,93187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046404"},{"annotations":[92949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051736"},{"annotations":[114413,92452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043771"},{"annotations":[90128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051730"},{"annotations":[101742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004385"},{"annotations":[112586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034317"},{"annotations":[99572,117527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004550"},{"annotations":[118058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051731"},{"annotations":[117528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004798"},{"annotations":[115078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033862"},{"annotations":[117529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009041"},{"annotations":[114415,92453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004849"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphate group, usually from ATP or GTP, to a nucleobase, nucleoside, nucleotide or polynucleotide substrate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_00779":null,"SJAG_00956":null,"SJAG_01070":null,"SJAG_01791":null,"SJAG_01979":null,"SJAG_02038":null,"SJAG_02680":null,"SJAG_02887":null,"SJAG_03708":null,"SJAG_03789":null,"SJAG_03798":null,"SJAG_04657":null,"SJAG_04693":null,"SJAG_04849":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"nucleobase-containing compound kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleobase, nucleoside, nucleotide kinase activity","type":"related"}],"termid":"GO:0019205","terms_by_termid":{"GO:0004001":null,"GO:0004017":null,"GO:0004127":null,"GO:0004385":null,"GO:0004550":null,"GO:0004798":null,"GO:0004849":null,"GO:0009041":null,"GO:0033862":null,"GO:0034317":null,"GO:0043771":null,"GO:0046404":null,"GO:0051730":null,"GO:0051731":null,"GO:0051736":null}}


id: GO:0060477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine that is part of the acrosome reaction.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-serine phosphorylation involved in acrosome reaction (obsolete GO:0060477)","termid":"GO:0060477"}


id: PBO:0078160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 38-1","termid":"PBO:0078160"}


id: GO:0043456
data:
  {"annotated_genes":["SJAG_05314","SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75549],"is_not":false,"summary":null,"term":"GO:0043456"},{"annotations":[89168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the pentose-phosphate shunt, the process in which glucose is oxidized, coupled to NADPH synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of generation of precursor metabolites and energy","termid":"GO:0043467"},{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of NADP metabolic process","termid":"GO:1902031"},{"relation_name":"regulates","term_name":"pentose-phosphate shunt","termid":"GO:0006098"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0005975","GO:0044281","GO:0006091"],"is_obsolete":false,"name":"regulation of pentose-phosphate shunt","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of pentose phosphate pathway","type":"exact"},{"name":"regulation of pentose phosphate shunt","type":"exact"},{"name":"regulation of pentose-phosphate pathway","type":"exact"}],"termid":"GO:0043456","terms_by_termid":{"GO:0043456":null,"GO:1905857":null}}


id: GO:0060129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of a thyroid-stimulating hormone-secreting cell. A thyroid-stimulating hormone-secreting cell is a basophil cell of the anterior pituitary that produces thyroid-stimulating hormone, thyrotrophin.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glandular epithelial cell differentiation","termid":"GO:0002067"},{"relation_name":"is_a","term_name":"neuroendocrine cell differentiation","termid":"GO:0061101"},{"relation_name":"part_of","term_name":"adenohypophysis development","termid":"GO:0021984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thyroid-stimulating hormone-secreting cell differentiation","synonyms":[{"name":"TSH-secreting cell differentiation","type":"exact"},{"name":"beta-basophil differentiation","type":"exact"},{"name":"thyroid stimulating hormone secreting cell differentiation","type":"exact"},{"name":"thyrotrope differentiation","type":"exact"},{"name":"thyrotroph differentiation","type":"exact"}],"termid":"GO:0060129"}


id: GO:0018981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving triethanolamine, a combustible, hygroscopic, colorless liquid commonly used in dry-cleaning solutions, cosmetics, detergents, textile processing, wool scouring, and as a corrosion inhibitor and pharmaceutical alkalizing agent.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete triethanolamine metabolic process (obsolete GO:0018981)","synonyms":[{"name":"triethanolamine metabolism","type":"exact"}],"termid":"GO:0018981"}


id: MONDO:0032829
data:
  {"annotated_genes":["SJAG_01713"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86433],"is_not":false,"summary":null,"term":"MONDO:0032829"}]},"cv_name":"mondo","definition":"Neurodevelopmental disorder in which the cause of the disease is a variation in the POLR2A gene; it is characterized by early-onset hypotonia, delayed walking, poor speech, and impaired intellectual development. Other features may include feeding difficulties, dysmorphic features, and visual problems. Brain magnetic resonance imaging tends to show delayed myelination, thin corpus callosum, and/or enlarged ventricles.","definition_xrefs":["PMID:31353023","PMID:35328024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia and variable intellectual and behavioral abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1684818","OMIM:618603","UMLS:C5231423"],"synonyms":[{"name":"NEDHIB","type":"exact"},{"name":"POLR2A-associated neurodevelopmental disability","type":"exact"},{"name":"POLR2A-related disorder","type":"exact"},{"name":"neurodevelopmental disorder with hypotonia and variable intellectual and behavioral abnormalities","type":"exact"}],"termid":"MONDO:0032829","terms_by_termid":{"MONDO:0032829":null},"xrefs":{"Monarch":{"xref_id":"0032829"}}}


id: PBO:0081215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger matrin-type 5","termid":"PBO:0081215"}


id: PBO:0063541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylethanolamine binding protein 1","termid":"PBO:0063541"}


id: MONDO:0016110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A group of rare skeletal muscle ion-channel disorders caused by genetic mutations in the sodium and chloride channel genes. It is characterized by altered membrane excitability resulting in skeletal muscle stiffness. This group of myotonias is distinct from myotonic dystrophy because of the absence of systemic features or progressive weakness.","definition_xrefs":["NCIT:C122787"],"gene_count":0,"genotype_count":0,"name":"obsolete non-dystrophic myopathy (obsolete MONDO:0016110)","secondary_identifiers":["Orphanet:206656","NANDO:1200496","SCTID:424795008"],"synonyms":[{"name":"non dystrophic myotonia","type":"exact"},{"name":"non-dystrophic myotonia","type":"exact"}],"termid":"MONDO:0016110","xrefs":{"Monarch":{"xref_id":"0016110"}}}


id: GO:0005575
data:
  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