# terms

id: GO:0046066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dGDP, deoxyguanosine diphosphate, (2'-deoxyguanosine 5'-diphosphate).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide metabolic process","termid":"GO:0009151"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dGDP metabolic process","synonyms":[{"name":"dGDP metabolism","type":"exact"}],"termid":"GO:0046066"}


id: PBO:0082344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA translocase involved in chromatin remodeling; ATPase component that, with Itc1p, forms a complex required for repression of a-specific genes, INO1, and early meiotic genes during mitotic growth; exhibits basal levels of chromatin binding throughout the genome as well as interacts with sequence-specific factors to accurately position nucleosomes in chromatin; targeted by Ume6p- and Sua7p-dependent DNA looping to many loci genome-wide","termid":"PBO:0082344"}


id: PBO:0038450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0038450"}


id: MONDO:0004192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the urethra","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant urinary system neoplasm","termid":"MONDO:0006295"},{"relation_name":"is_a","term_name":"urethra neoplasm","termid":"MONDO:0021239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"urethra cancer","secondary_identifiers":["ICD10CM:C68.0","MEDGEN:57565","NCIT:C7507","ONCOTREE:UCA","ICD9:189.3","UMLS:C0153620","DOID:734","SCTID:363459007"],"synonyms":[{"name":"cancer of urethra","type":"exact"},{"name":"malignant neoplasm of the urethra","type":"exact"},{"name":"malignant neoplasm of urethra","type":"exact"},{"name":"malignant tumor of the urethra","type":"exact"},{"name":"malignant tumor of urethra","type":"exact"},{"name":"malignant tumour of the urethra","type":"exact"},{"name":"malignant tumour of urethra","type":"exact"},{"name":"malignant urethra neoplasm","type":"exact"},{"name":"malignant urethra tumor","type":"exact"},{"name":"malignant urethra tumour","type":"exact"},{"name":"malignant urethral neoplasm","type":"exact"},{"name":"malignant urethral tumor","type":"exact"},{"name":"malignant urethral tumour","type":"exact"},{"name":"urethra cancer","type":"exact"},{"name":"urethral Ca","type":"exact"},{"name":"urethral cancer","type":"related"}],"termid":"MONDO:0004192","xrefs":{"Monarch":{"xref_id":"0004192"}}}


id: GO:0090087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"peptide transport","termid":"GO:0015833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of peptide transport","termid":"GO:0090087"}


id: GO:0047982
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-homocysteine + H2O = sulfide + NH3 + 2-oxobutanoate.","definition_xrefs":["EC:4.4.1.2","MetaCyc:HOMOCYSTEINE-DESULFHYDRASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"homocysteine desulfhydrase activity","secondary_identifiers":["RHEA:14501","Reactome:R-HSA-1614631"],"synonyms":[{"name":"L-homocysteine hydrogen-sulfide-lyase (deaminating)","type":"related"},{"name":"L-homocysteine hydrogen-sulfide-lyase (deaminating; 2-oxobutanoate-forming)","type":"related"},{"name":"homocysteine desulfurase activity","type":"related"}],"termid":"GO:0047982"}


id: PBO:0046452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermal growth factor receptor pathway substrate 8","termid":"PBO:0046452"}


id: MONDO:0008987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cirrhosis, familial (obsolete MONDO:0008987)","termid":"MONDO:0008987","xrefs":{"Monarch":{"xref_id":"0008987"}}}


id: PBO:0070313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 2","termid":"PBO:0070313"}


id: PBO:0053747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 974","termid":"PBO:0053747"}


id: PBO:0089581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF5, Tif5","termid":"PBO:0089581"}


id: PBO:0051691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 antisense RNA 1","termid":"PBO:0051691"}


id: MONDO:0859367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 96","secondary_identifiers":["OMIM:620228","UMLS:C5774303","MEDGEN:1824076"],"termid":"MONDO:0859367","xrefs":{"Monarch":{"xref_id":"0859367"}}}


id: GO:0034486
data:
  {"annotated_genes":["SJAG_03899","SJAG_01990","SJAG_01319","SJAG_01080","SJAG_05213","SJAG_03497","SJAG_03401","SJAG_02029","SJAG_03256","SJAG_04725","SJAG_04698","SJAG_00877","SJAG_03400","SJAG_01344","SJAG_00051","SJAG_03442"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89876,105194],"is_not":false,"summary":null,"term":"GO:0034486"},{"annotations":[95511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032974"},{"annotations":[103331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032975"},{"annotations":[102300,109518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990591"},{"annotations":[89874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034488"},{"annotations":[94078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034490"},{"annotations":[117699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036249"},{"annotations":[115059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140146"},{"annotations":[95557,96541,117701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"},{"annotations":[96849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990818"},{"annotations":[103332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"},{"annotations":[103334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090515"},{"annotations":[96850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[103335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[103336,102302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901482"},{"annotations":[96851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089707"},{"annotations":[103337,109520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"},{"annotations":[103338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090516"},{"annotations":[103339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090514"},{"annotations":[95558,117702,96542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036246"},{"annotations":[117703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071995"},{"annotations":[88581,106166,114011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180042"},{"annotations":[113834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140147"}]},"cv_name":"biological_process","definition":"The process in which a solute is transported from one side of the vacuolar membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00051":null,"SJAG_00877":null,"SJAG_01080":null,"SJAG_01319":null,"SJAG_01344":null,"SJAG_01990":null,"SJAG_02029":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03401":null,"SJAG_03442":null,"SJAG_03497":null,"SJAG_03899":null,"SJAG_04698":null,"SJAG_04725":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"vacuolar transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vacuolar membrane transport","type":"exact"}],"termid":"GO:0034486","terms_by_termid":{"GO:0032974":null,"GO:0032975":null,"GO:0034486":null,"GO:0034488":null,"GO:0034490":null,"GO:0036246":null,"GO:0036249":null,"GO:0071995":null,"GO:0071996":null,"GO:0089707":null,"GO:0089708":null,"GO:0090513":null,"GO:0090514":null,"GO:0090515":null,"GO:0090516":null,"GO:0090517":null,"GO:0090518":null,"GO:0140146":null,"GO:0140147":null,"GO:0180042":null,"GO:1901482":null,"GO:1990591":null,"GO:1990818":null}}


id: PBO:0068983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 227, pseudogene","termid":"PBO:0068983"}


id: PBO:0087862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator of genes involved in glycolysis; interacts and functions with the DNA-binding protein Gcr1p","termid":"PBO:0087862"}


id: PBO:0039030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 6","termid":"PBO:0039030"}


id: PBO:0081652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 577","termid":"PBO:0081652"}


id: PR:O74556
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC970.02 gene.","definition_xrefs":["UniProtKB:O74556","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannan endo-1,6-alpha-mannosidase C970.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.02","synonyms":[{"name":"Spom972h-SPCC970.02","type":"exact"},{"name":"endo-alpha-1->6-D-mannanase C970.02 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74556"}


id: GO:0045699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synergid cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of synergid differentiation","termid":"GO:0045697"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"synergid differentiation","termid":"GO:0009563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of synergid differentiation","synonyms":[{"name":"activation of synergid differentiation","type":"narrow"},{"name":"positive regulation of synergid cell differentiation","type":"exact"},{"name":"stimulation of synergid differentiation","type":"narrow"},{"name":"up regulation of synergid differentiation","type":"exact"},{"name":"up-regulation of synergid differentiation","type":"exact"},{"name":"upregulation of synergid differentiation","type":"exact"}],"termid":"GO:0045699"}


id: PBO:0055685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoyltransferase 1","termid":"PBO:0055685"}


id: GO:0000376
data:
  {"annotated_genes":["SJAG_01517","SJAG_04738"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98207],"is_not":false,"summary":null,"term":"GO:0000376"},{"annotations":[97577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000372"}]},"cv_name":"biological_process","definition":"Splicing of RNA via a series of two transesterification reactions with exogenous guanosine as the initiating nucleophile.","definition_xrefs":["PMID:11377794","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA splicing, via transesterification reactions","termid":"GO:0000375"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01517":null,"SJAG_04738":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"RNA splicing, via transesterification reactions with guanosine as nucleophile","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000376","terms_by_termid":{"GO:0000372":null,"GO:0000376":null}}


id: MONDO:0016900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete partial deletion of the long arm of chromosome 1 (obsolete MONDO:0016900)","termid":"MONDO:0016900","xrefs":{"Monarch":{"xref_id":"0016900"}}}


id: PBO:0075052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-15","termid":"PBO:0075052"}


id: GO:1903613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of protein tyrosine phosphatase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:11129957"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of protein tyrosine phosphatase activity (obsolete GO:1903613)","synonyms":[{"name":"regulation of PPT-phosphatase activity","type":"exact"},{"name":"regulation of PTP-phosphatase activity","type":"exact"},{"name":"regulation of PTPase activity","type":"exact"},{"name":"regulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"regulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"regulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"regulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"regulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"regulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"regulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"regulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"regulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"regulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"regulation of tyrosylprotein phosphatase activity","type":"exact"}],"termid":"GO:1903613"}


id: PBO:0047941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(14)(q23)","termid":"PBO:0047941"}


id: PBO:0049528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2AZ2 divergent transcript","termid":"PBO:0049528"}


id: PBO:0063280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily A, 6","termid":"PBO:0063280"}


id: PATO:0002021
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex 3-D shape quality inhering in a bearer by virtue of the bearer's resembling a cone (a 3-D shape with a round cross section that tapers).","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Cone_(geometry)"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convex 3-D shape","termid":"PATO:0002007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conical","secondary_identifiers":["Image:http\\://upload.wikimedia.org/wikipedia/commons/d/d2/Cone_3d.png"],"synonyms":[{"name":"cone-shaped","type":"exact"}],"termid":"PATO:0002021"}


id: GO:0034735
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor complex that forms part of the TFIIIC complex, observed in human; composed of five subunits (GTF3C1/hTFIIIC220/TFIIICalpha, GTF3C2/hTFIIIC110/TFIIICbeta, GTF3C3/hTFIIIC102/TFIIICgamma, GTF3C4/hTFIIIC90/TFIIICdelta and GTF3C5/hTFIIIC63/TFIIICepsilon in human) that together recognize the type 2 RNA polymerase III promoter.","definition_xrefs":["PMID:11433012","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase III transcription regulator complex","termid":"GO:0090576"},{"relation_name":"part_of","term_name":"transcription factor TFIIIC complex","termid":"GO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"transcription factor TFIIIC2 complex","termid":"GO:0034735"}


id: PBO:0081427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 281","termid":"PBO:0081427"}


id: MONDO:0100102
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any fetal akinesia deformation sequence in which the cause of the disease is a mutation in the RAPSN gene.","definition_xrefs":["OMIM:618388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fetal akinesia deformation sequence","termid":"MONDO:0008824"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetal akinesia deformation sequence 2","secondary_identifiers":["DOID:0111378","GARD:16495","MEDGEN:1678048","UMLS:C4760576"],"synonyms":[{"name":"FADS2","type":"exact"}],"termid":"MONDO:0100102","xrefs":{"Monarch":{"xref_id":"0100102"}}}


id: MONDO:0005405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Asthma that starts in childhood.","definition_xrefs":["EFO:0004591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asthma","termid":"MONDO:0004979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood onset asthma","secondary_identifiers":["DOID:0080815","MEDGEN:538550","SCTID:233678006","UMLS:C0264408"],"synonyms":[{"name":"asthma of childhood","type":"exact"},{"name":"childhood asthma","type":"exact"},{"name":"paediatric asthma","type":"exact"},{"name":"pediatric asthma","type":"exact"}],"termid":"MONDO:0005405","xrefs":{"Monarch":{"xref_id":"0005405"}}}


id: PBO:0028026
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_meiosis_II","termid":"PBO:0028026"}


id: PBO:0000767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO conjugating enzyme Hus5","termid":"PBO:0000767"}


id: PBO:0078537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 29","termid":"PBO:0078537"}


id: PBO:0084738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial intermembrane space protein; forms complex with Ups2p that transfers phosphatidylserine from outer membrane to inner membrane for phosphatidylethanolamine synthesis; mutation affects mitochondrial distribution and morphology; contains twin cysteine-x9-cysteine motifs; protein abundance increases in response to DNA replication stress","termid":"PBO:0084738"}


id: FYPO:0006010
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mating projection is assembled but does not meet a cell of the opposite mating type.","definition_xrefs":["PMID:28410370","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished shmoo contact with partner cell","synonyms":[{"name":"abolished shmoo contact with partner cell during conjugation","type":"exact"},{"name":"shmoo does not meet partner cell","type":"exact"},{"name":"shmoo without partner cell","type":"broad"}],"termid":"FYPO:0006010"}


id: PBO:0064274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and RhoGEF domain containing G7","termid":"PBO:0064274"}


id: GO:0060196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the synthesis of antisense RNA, an RNA molecule complementary in sequence to another RNA or DNA molecule, which, by binding the latter, acts to inhibit its function and/or completion of synthesis, on a template of DNA.","definition_xrefs":["GOC:dph","GOC:tb","PMID:18075583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"},{"relation_name":"is_a","term_name":"regulation of antisense RNA transcription","termid":"GO:0060194"},{"relation_name":"positively_regulates","term_name":"antisense RNA transcription","termid":"GO:0009300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0008150","GO:0006355","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"positive regulation of antisense RNA transcription","termid":"GO:0060196"}


id: PBO:0052068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KAT7 pseudogene 1","termid":"PBO:0052068"}


id: SO:0000486
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence of the 5' exon preceding the start codon.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"noncoding_region_of_exon","termid":"SO:0001214"},{"relation_name":"part_of","term_name":"five_prime_coding_exon","termid":"SO:0000200"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_coding_exon_noncoding_region","synonyms":[{"name":"five prime coding exon noncoding region","type":"exact"},{"name":"five_prime_exon_noncoding_region","type":"exact"}],"termid":"SO:0000486"}


id: GO:0008055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ocellus pigments, general or particular coloring matter in living organisms, found or utilized in the ocellus, a minute simple eye found in many invertebrates.","definition_xrefs":["PMID:15176085","GOC:ai","PMID:18421706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"pigment biosynthetic process","termid":"GO:0046148"},{"relation_name":"is_a","term_name":"ocellus pigment metabolic process","termid":"GO:0046158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"ocellus pigment biosynthetic process","synonyms":[{"name":"ocellus pigment anabolism","type":"exact"},{"name":"ocellus pigment biosynthesis","type":"exact"},{"name":"ocellus pigment formation","type":"exact"},{"name":"ocellus pigment synthesis","type":"exact"}],"termid":"GO:0008055"}


id: PBO:0016985
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"co-expression of nus1 and rer2 functionally complements a triple deletion of NUS1, RER2 and SRT1 in S. cerevisiae","termid":"PBO:0016985"}


id: PBO:0069040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 285, pseudogene","termid":"PBO:0069040"}


id: MONDO:1011225
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Entropion that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"entropion, non-human animal","termid":"MONDO:1010323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"entropion, dog","secondary_identifiers":["OMIA:000337-9615"],"termid":"MONDO:1011225","xrefs":{"Monarch":{"xref_id":"1011225"}}}


id: GO:0102471
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 6C-glucosyl-2-hydroxynaringenin = isovitexin-7-olate + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxynaringenin-6C-glucoside dehydratase activity (obsolete GO:0102471)","termid":"GO:0102471"}


id: MONDO:0000247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare but potentially life-threatening disorder characterized by the proliferation of histiocytes and macrophages and phagocytosis of red blood cells, white blood cells, and platelets. It may be inherited or secondary, due to infections, autoimmune disorders, or underlying malignancies. Signs and symptoms include fever, lymphadenopathy, hepatomegaly, splenomegaly, and pancytopenia.","definition_xrefs":["NCIT:C34792"],"gene_count":0,"genotype_count":0,"name":"obsolete hemophagocytic lymphohistiocytosis (obsolete MONDO:0000247)","termid":"MONDO:0000247","xrefs":{"Monarch":{"xref_id":"0000247"}}}


id: PR:P36607
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rad8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rad8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.01c","synonyms":[{"name":"DNA repair protein RAD5 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rad8","type":"exact"}],"termid":"PR:P36607"}


id: MONDO:1010438
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cardiomyopathy that occurs in salmonids.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy, non-human animal","termid":"MONDO:1010010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyopathy, salmonids","secondary_identifiers":["OMIA:000160-8015"],"termid":"MONDO:1010438","xrefs":{"Monarch":{"xref_id":"1010438"}}}


id: MONDO:0014059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any microphthalmia, isolated, with coloboma in which the cause of the disease is a mutation in the TENM3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, isolated, with coloboma","termid":"MONDO:0000170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia, isolated, with coloboma 9","secondary_identifiers":["MEDGEN:767506","OMIM:615145","GARD:15909","UMLS:C3554592"],"synonyms":[{"name":"MCOPCB9","type":"related"},{"name":"TENM3 microphthalmia, isolated, with coloboma","type":"exact"},{"name":"microphthalmia, isolated, with coloboma 9","type":"exact"},{"name":"microphthalmia, isolated, with coloboma caused by mutation in TENM3","type":"exact"},{"name":"microphthalmia, isolated, with coloboma type 9","type":"exact"},{"name":"microphthalmia, syndromic 15","type":"exact"}],"termid":"MONDO:0014059","xrefs":{"Monarch":{"xref_id":"0014059"}}}


id: MONDO:1010644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemophilia B that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia B, non-human animal","termid":"MONDO:1010075"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemophilia B, domestic cat","secondary_identifiers":["OMIA:000438-9685"],"termid":"MONDO:1010644","xrefs":{"Monarch":{"xref_id":"1010644"}}}


id: PBO:0061394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin/nucleoplasmin 3","termid":"PBO:0061394"}


id: MONDO:0018698
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of neuroendocrine tumor of the small intestine that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"small intestine neuroendocrine neoplasm","termid":"MONDO:0018510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"hereditary neuroendocrine tumor of small intestine","secondary_identifiers":["GARD:21899","MEDGEN:1826066","Orphanet:456333","UMLS:C5679993"],"synonyms":[{"name":"hereditary neuroendocrine tumor of small bowel","type":"exact"},{"name":"hereditary neuroendocrine tumor of the small intestine","type":"exact"},{"name":"hereditary neuroendocrine tumour of small bowel","type":"exact"},{"name":"hereditary neuroendocrine tumour of the small intestine","type":"exact"},{"name":"hereditary small intestine neuroendocrine neoplasm","type":"exact"}],"termid":"MONDO:0018698","xrefs":{"Monarch":{"xref_id":"0018698"}}}


id: GO:2000178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of neural precursor cell proliferation.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of neural precursor cell proliferation","termid":"GO:2000177"},{"relation_name":"negatively_regulates","term_name":"neural precursor cell proliferation","termid":"GO:0061351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neural precursor cell proliferation","termid":"GO:2000178"}


id: PBO:0067244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 317, pseudogene","termid":"PBO:0067244"}


id: PBO:0081571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 497","termid":"PBO:0081571"}


id: GO:0045933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of muscle contraction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle contraction","termid":"GO:0006937"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"muscle contraction","termid":"GO:0006936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of muscle contraction","synonyms":[{"name":"activation of muscle contraction","type":"narrow"},{"name":"stimulation of muscle contraction","type":"narrow"},{"name":"up regulation of muscle contraction","type":"exact"},{"name":"up-regulation of muscle contraction","type":"exact"},{"name":"upregulation of muscle contraction","type":"exact"}],"termid":"GO:0045933"}


id: FYPO:0003487
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cut phenotype that is observed when a cell is exposed to ionizing radiation. In a cut phenotype, a cell undergoes septation despite abnormal chromosome segregation.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cut during cellular response to ionizing radiation (obsolete FYPO:0003487)","synonyms":[{"name":"cut during cellular response to IR","type":"exact"},{"name":"cut during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"cut during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"septation following abnormal mitotic chromosome segregation during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0003487"}


id: FYECO:0000271
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sodium nitroprusside (SNP) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ SNP","synonyms":[{"name":"+ sodium nitroprusside","type":"exact"}],"termid":"FYECO:0000271"}


id: PATO:0001274
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of grey color and low saturation.","definition_xrefs":["PATOC:GVG"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001274 pale grey (obsolete PATO:0001274)","termid":"PATO:0001274"}


id: PBO:0052955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KxDL motif containing 1","termid":"PBO:0052955"}


id: GO:0061466
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The part of the plasma membrane that contributes to the structure of a cell junction.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane part of cell junction (obsolete GO:0061466)","termid":"GO:0061466"}


id: PBO:0064810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1R2C family member C","termid":"PBO:0064810"}


id: PBO:0044577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diazepam binding inhibitor-like 5, pseudogene","termid":"PBO:0044577"}


id: PBO:0066633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab interacting lysosomal protein like 2","termid":"PBO:0066633"}


id: FYPO:0006304
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which F-actin forms a large spot in the medial region of the cell, instead of assembling into a contractile ring.","definition_xrefs":["PMID:19713940","PMID:9635188","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"actomyosin contractile ring absent","termid":"FYPO:0001008"},{"relation_name":"is_a","term_name":"actomyosin contractile ring absent","termid":"FYPO:0001008"},{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton during vegetative growth","termid":"FYPO:0002398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"medial F-actin spot present","synonyms":[{"name":"actomyosin contractile ring absent, with medial F-actin spot present","type":"exact"},{"name":"medial F-actin spot present during mitotic cell cycle","type":"related"},{"name":"medial F-actin spot present during vegetative growth","type":"exact"}],"termid":"FYPO:0006304"}


id: PBO:0090656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASTRA/Swr1/Ino80 complex AAA family ATPase Rvb1","termid":"PBO:0090656"}


id: PBO:0089429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR55 family, involved in ribosome biogenesis","termid":"PBO:0089429"}


id: GO:0023052
data:
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id: PBO:0065352
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id: GO:0048437
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id: MONDO:0021337
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id: MOD:02021
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id: PBO:0063380
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id: PR:O14136
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id: MONDO:0008948
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id: GO:0097592
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id: PBO:0068737
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id: MONDO:0013089
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id: MONDO:1011444
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id: MONDO:0012465
data:
  {"annotated_genes":["SJAG_03115"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84698],"is_not":false,"summary":null,"term":"MONDO:0012465"}]},"cv_name":"mondo","definition":"The combination of a propensity for venous thrombosis and seizures has been reported in two unrelated kindreds. Transmission is autosomal recessive. It results from a point mutation of PIGM, which reduces transcription of PIGM and blocks mannosylation of glycosylphosphatidylinositol (GPI), leading to partial but severe deficiency of GPI.","definition_xrefs":["Orphanet:83639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hematological disorder","termid":"MONDO:0009332"},{"relation_name":"is_a","term_name":"inborn disorder of glycosphingolipid and glycosylphosphatidylinositol anchor glycosylation","termid":"MONDO:0017748"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03115":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005570","MONDO:0002525","MONDO:0024322"],"is_obsolete":false,"name":"hypercoagulability syndrome due to glycosylphosphatidylinositol deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200983","UMLS:C5201145","GARD:9965","MEDGEN:1684821","SCTID:724344004","icd11.foundation:1811042875","OMIM:610293"],"synonyms":[{"name":"GPI deficiency","type":"related"},{"name":"GPID","type":"related"},{"name":"PIGM-CDG","type":"exact"},{"name":"congenital disorder of glycosylation due to PIGM deficiency","type":"related"},{"name":"glycosylphosphatidylinositol biosynthesis defect 1","type":"related"},{"name":"glycosylphosphatidylinositol deficiency","type":"related"}],"termid":"MONDO:0012465","terms_by_termid":{"MONDO:0012465":null},"xrefs":{"Monarch":{"xref_id":"0012465"}}}


id: PBO:0001402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sir2 family histone deacetylase Hst4","termid":"PBO:0001402"}


id: GO:2001100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a pentasaccharideacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide transport","termid":"GO:0015772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"pentasaccharide transport","termid":"GO:2001100"}


id: PBO:0030987
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nucleosome_positioning_in_heterochromatin","termid":"PBO:0030987"}


id: MONDO:0021421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete carcinoid tumors, intestina (obsolete MONDO:0021421)","termid":"MONDO:0021421","xrefs":{"Monarch":{"xref_id":"0021421"}}}


id: PBO:0002097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF4E, 4F complex subunit","termid":"PBO:0002097"}


id: PR:Q9US48
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glycosylphosphatidylinositol anchor attachment 1 protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DAN","PANTHER:PTHR13304:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI transamidase component gaa1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.11","secondary_identifiers":["UniProtKB:Q9US48"],"synonyms":[{"name":"SPAC1002.11","type":"related"},{"name":"Spom972h-GPAA1","type":"exact"}],"termid":"PR:Q9US48"}


id: GO:0097709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events leading to growth of connective tissue when loss of tissues that are incapable of regeneration occurs, or when fibrinous exudate cannot be adequately cleared.","definition_xrefs":["GOC:bc","GOC:BHF","GOC:BHF_miRNA","PMID:25590961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue remodeling","termid":"GO:0048771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"connective tissue replacement","termid":"GO:0097709"}


id: MONDO:0019708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","synonyms":[{"name":"primary osteodysplasia with disorganized development of skeletal components","type":"related"},{"name":"primary skeletal dysplasia with disorganized development of skeletal components","type":"related"}],"termid":"MONDO:0019708","xrefs":{"Monarch":{"xref_id":"0019708"}}}


id: MONDO:1010616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital hypothyroidism in dogs in which the cause of the disease is a mutation in the SCL5AG gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypothyroidism, dog","termid":"MONDO:1010602"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital dyshormonogenic hypothyroidism with goiter, SLC5A5-related, dog","secondary_identifiers":["OMIA:002174-9615"],"termid":"MONDO:1010616","xrefs":{"Monarch":{"xref_id":"1010616"}}}


id: MONDO:0007091
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelia and terminal transverse hemimelia","secondary_identifiers":["OMIM:104400","UMLS:C1863014","MESH:C566294","MEDGEN:400186"],"synonyms":[{"name":"amelia and terminal transverse hemimelia","type":"exact"}],"termid":"MONDO:0007091","xrefs":{"Monarch":{"xref_id":"0007091"}}}


id: MONDO:1012499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"subclinical hypocalcemia, non-human animal","termid":"MONDO:1011720"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subclinical hypocalcemia, cattle","secondary_identifiers":["OMIA:002048-9913"],"termid":"MONDO:1012499","xrefs":{"Monarch":{"xref_id":"1012499"}}}


id: PBO:0061023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein interacting with the FHA domain of MKI67 pseudogene 6","termid":"PBO:0061023"}


id: MONDO:0001456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral retinal degeneration","termid":"MONDO:0001451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cobblestone retinal degeneration","secondary_identifiers":["MEDGEN:509685","DOID:12166","ICD9:362.61","UMLS:C0154854","SCTID:69134001"],"synonyms":[{"name":"paving stone degeneration of retina","type":"exact"},{"name":"paving stone retinal degeneration","type":"exact"}],"termid":"MONDO:0001456","xrefs":{"Monarch":{"xref_id":"0001456"}}}


id: GO:0035458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-beta stimulus. Interferon-beta is a type I interferon.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interferon-beta","termid":"GO:0035456"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interferon-beta","synonyms":[{"name":"cellular response to beta-1 interferon","type":"related"},{"name":"cellular response to fiblaferon","type":"exact"},{"name":"cellular response to fibroblast interferon","type":"exact"}],"termid":"GO:0035458"}


id: PBO:0076888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 41","termid":"PBO:0076888"}


id: PBO:0029738
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_DNA_topoisomerase_II_activity","termid":"PBO:0029738"}


id: PBO:0072116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14 pseudogene 5","termid":"PBO:0072116"}


id: PBO:0062512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily J member 1","termid":"PBO:0062512"}


id: MONDO:0020784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete short sleep, familial natural, 1 (obsolete MONDO:0020784)","secondary_identifiers":["OMIM:612975"],"synonyms":[{"name":"FNSS1","type":"related"},{"name":"SHORT SLEEP, FAMILIAL NATURAL, 1","type":"related"},{"name":"Short Sleep Phenotype","type":"related"},{"name":"short sleep, familial natural, 1","type":"exact"}],"termid":"MONDO:0020784","xrefs":{"Monarch":{"xref_id":"0020784"}}}


id: FYPO:0002584
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature mitochondrial transfer RNA (tRNA) measured in a cell is lower than normal. Total tRNA or a specific tRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mature tRNA level during vegetative growth","termid":"FYPO:0002583"},{"relation_name":"is_a","term_name":"decreased mitochondrial RNA level","termid":"FYPO:0003423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased mature mitochondrial tRNA level","synonyms":[{"name":"decreased mature mitochondrial tRNA accumulation","type":"related"},{"name":"decreased mature mitochondrial tRNA level during mitotic cell cycle","type":"related"},{"name":"decreased mature mitochondrial tRNA level during vegetative growth","type":"exact"},{"name":"decreased mature mitochondrial tRNA transcript level","type":"exact"},{"name":"decreased mature mitochondrial transfer RNA level","type":"exact"},{"name":"decreased mitochondrial tRNA level","type":"broad"},{"name":"reduced mitochondrial tRNA level","type":"exact"}],"termid":"FYPO:0002584"}


id: PR:Q10248
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4G9.20c gene.","definition_xrefs":["UniProtKB:Q10248","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C4G9.20c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.20c","synonyms":[{"name":"Spom972h-SPAC4G9.20c","type":"exact"}],"termid":"PR:Q10248"}


id: PBO:0031838
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mating_projection_absent","termid":"PBO:0031838"}


id: PBO:0081842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 776","termid":"PBO:0081842"}


id: MONDO:0001739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A labyrinthitis which is a bacterial infectious disease of the inner ear, often causing deafness and loss of vestibular function. This is caused when bacteria spread to the inner ear during the course of severe acute otitis media, purulent meningitis, or an enlarging cholesteatoma.","definition_xrefs":["DOID:13534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"labyrinthitis","termid":"MONDO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purulent labyrinthitis","secondary_identifiers":["ICD9:386.33","UMLS:C0155506","SCTID:24817009","icd11.foundation:479586656","MEDGEN:509995"],"synonyms":[{"name":"acute suppurative labyrinthitis","type":"related"},{"name":"bacterial labyrinthitis","type":"exact"},{"name":"suppurative labyrinthitis","type":"exact"}],"termid":"MONDO:0001739","xrefs":{"Monarch":{"xref_id":"0001739"}}}


id: PBO:0078957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon AGA) 1-1","termid":"PBO:0078957"}


id: PBO:0060051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 39","termid":"PBO:0060051"}


id: GO:0051556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving leucoanthocyanidins, a class of colorless intermediates in the biosynthetic pathway of the pigmented flavonoids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"},{"relation_name":"is_a","term_name":"flavonoid metabolic process","termid":"GO:0009812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"leucoanthocyanidin metabolic process","secondary_identifiers":["MetaCyc:PWY1F-823"],"synonyms":[{"name":"leucoanthocyanidin metabolism","type":"exact"}],"termid":"GO:0051556"}


id: PBO:0086058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that associates with ribosomes; has a putative RNA binding domain; in mammals the corresponding protein, eIF2D, has been shown to possess translation initiation factor activity","termid":"PBO:0086058"}


id: _global:assayed_using
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extension_relations","definition":"Relation between a phenotype and an entity, such as a gene product that acts as an enzyme or substrate, with which the phenotype was assayed.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assayed_using","termid":"_global:assayed_using"}


id: PBO:0089535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CORVET complex WD repeat subunit Vps3","termid":"PBO:0089535"}


id: PBO:0052136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily H member 3","termid":"PBO:0052136"}


id: PBO:0065000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRDM6 antisense RNA 1","termid":"PBO:0065000"}


id: GO:0052488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of pathogen-associated molecular pattern-induced symbiont innate immunity (obsolete GO:0052488)","synonyms":[{"name":"negative regulation by organism of pathogen-associated molecular pattern-induced symbiont innate immunity","type":"exact"},{"name":"suppression of MAMP induced symbiont innate immunity","type":"exact"},{"name":"suppression of MAMP-induced symbiont innate immunity","type":"exact"},{"name":"suppression of PAMP induced symbiont innate immunity","type":"exact"},{"name":"suppression of PAMP-induced symbiont innate immunity","type":"exact"},{"name":"suppression of general elicitor induced symbiont innate immunity","type":"exact"},{"name":"suppression of general elicitor-induced symbiont innate immunity","type":"exact"},{"name":"suppression of pathogen-associated molecular pattern-induced symbiont innate immunity","type":"exact"}],"termid":"GO:0052488"}


id: GO:0033249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways leading to the breakdown of any antibiotic that contains the condensed beta-lactamthiazolidine ring system.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of penicillin metabolic process","termid":"GO:0033246"},{"relation_name":"is_a","term_name":"regulation of penicillin catabolic process","termid":"GO:0033247"},{"relation_name":"positively_regulates","term_name":"penicillin catabolic process","termid":"GO:0042317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006790","GO:0019748","GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"positive regulation of penicillin catabolic process","synonyms":[{"name":"positive regulation of penicillin breakdown","type":"exact"},{"name":"positive regulation of penicillin catabolism","type":"exact"},{"name":"positive regulation of penicillin degradation","type":"exact"}],"termid":"GO:0033249"}


id: GO:0071972
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 a peptidoglycan dimer (tetrapeptide) + 3 H2O = a peptidoglycan tetramer with L,D cross-links (L-Lys-D-Asn-L-Lys) + di-trans,poly-cis-undecaprenyl diphosphate + 4 D-alanine.","definition_xrefs":["MetaCyc:RXN-11349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine-type carboxypeptidase activity","termid":"GO:0004185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0008233","GO:0003824","GO:0016787","GO:0140096"],"is_obsolete":false,"name":"peptidoglycan L,D-transpeptidase activity","termid":"GO:0071972"}


id: GO:0047023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + androsterone = NAD(P)H + H+ + 5-alpha-androstane-3,17-dione.","definition_xrefs":["EC:1.1.1.209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"androsterone dehydrogenase [NAD(P)+] activity","synonyms":[{"name":"3(17)alpha-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"3(or 17)-alpha-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"3(or 17)alpha-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"3(or 17)alpha-hydroxysteroid:NAD(P)+ oxidoreductase activity","type":"broad"}],"termid":"GO:0047023"}


id: PBO:0063460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor subunit B","termid":"PBO:0063460"}


id: GO:0071153
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed by the association of the guanine nucleotide exchange factor synembrin with the alpha(o) subunit of a heterotrimeric G protein.","definition_xrefs":["GOC:mah","PMID:12509430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"G-protein alpha(o)-synembrin complex","synonyms":[{"name":"Ric-8A G(o) alpha-1 subunit complex","type":"narrow"},{"name":"Ric-8A G(o) alpha-2 subunit complex","type":"narrow"}],"termid":"GO:0071153"}


id: GO:0009010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-sorbitol 6-phosphate + NAD+ = D-fructose 6-phosphate + NADH + H+.","definition_xrefs":["EC:1.1.1.140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"sorbitol-6-phosphate 2-dehydrogenase activity","secondary_identifiers":["MetaCyc:SORB6PDEHYDROG-RXN","RHEA:19837"],"synonyms":[{"name":"D-glucitol-6-phosphate dehydrogenase activity","type":"related"},{"name":"D-sorbitol 6-phosphate dehydrogenase activity","type":"related"},{"name":"D-sorbitol-6-phosphate dehydrogenase activity","type":"related"},{"name":"D-sorbitol-6-phosphate:NAD+ 2-oxidoreductase activity","type":"related"},{"name":"glucitol-6-phosphate dehydrogenase activity","type":"related"},{"name":"ketosephosphate reductase activity","type":"related"},{"name":"sorbitol-6-P-dehydrogenase activity","type":"related"}],"termid":"GO:0009010"}


id: PR:O13754
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tetratricopeptide repeat protein 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01484","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hsp70/Hsp90 co-chaperone cns1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A2.04c","secondary_identifiers":["UniProtKB:O13754"],"synonyms":[{"name":"Spom972h-TTC4","type":"exact"}],"termid":"PR:O13754"}


id: MONDO:0858939
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A high grade glioma that is characterized by the absence of histone H3, IDH1, and IDH2 mutations.","definition_xrefs":["DOID:0081277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pediatric high-grade glioma","termid":"MONDO:1010030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"diffuse pediatric-type high-grade glioma, H3-wildtype and IDH-wildtype","secondary_identifiers":["UMLS:C5669918","MEDGEN:1808288"],"termid":"MONDO:0858939","xrefs":{"Monarch":{"xref_id":"0858939"}}}


id: PBO:0027160
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_population_growth_during_glucose_starvation","termid":"PBO:0027160"}


id: GO:1903812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-serine into a cell.","definition_xrefs":["GO_REF:0000075","PMID:23895341","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-serine transport","termid":"GO:0015825"},{"relation_name":"is_a","term_name":"serine import across plasma membrane","termid":"GO:0098718"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"L-serine import across plasma membrane","synonyms":[{"name":"L-serine import into cell","type":"exact"}],"termid":"GO:1903812"}


id: GO:0006620
data:
  {"annotated_genes":["SJAG_02354","SJAG_01496","SJAG_00959","SJAG_00175","SJAG_03955","SJAG_03396","SJAG_02588","SJAG_02330","SJAG_00064","SJAG_02208"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87398,95222,109121],"is_not":false,"summary":null,"term":"GO:0006620"},{"annotations":[96829,90064,97543,107795,108824,109897,105659],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031204"}]},"cv_name":"biological_process","definition":"The targeting of proteins to a membrane that occurs after their translation. Some secretory proteins exhibit posttranslational transport into the endoplasmic reticulum (ER) lumen: they are synthesized in their entirety on free cytosolic ribosomes and then released into the cytosol, where they are bound by chaperones which keep them in an unfolded state, and subsequently are translocated across the ER membrane.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein targeting to membrane","termid":"GO:0006612"},{"relation_name":"is_a","term_name":"protein targeting to ER","termid":"GO:0045047"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00175":null,"SJAG_00959":null,"SJAG_01496":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02354":null,"SJAG_02588":null,"SJAG_03396":null,"SJAG_03955":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006605","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"post-translational protein targeting to endoplasmic reticulum membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SRP-independent endoplasmic reticulum protein-membrane targeting","type":"exact"},{"name":"posttranslational endoplasmic reticulum membrane targeting","type":"exact"},{"name":"posttranslational endoplasmic reticulum protein-membrane targeting","type":"exact"},{"name":"posttranslational protein endoplasmic reticulum membrane targeting","type":"exact"},{"name":"posttranslational protein targeting to ER membrane","type":"exact"},{"name":"posttranslational protein targeting to endoplasmic reticulum membrane","type":"exact"}],"termid":"GO:0006620","terms_by_termid":{"GO:0006620":null,"GO:0031204":null}}


id: GO:0051970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of transmission of a nerve impulse, the sequential electrochemical polarization and depolarization that travels across the membrane of a neuron in response to stimulation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell communication","termid":"GO:0010648"},{"relation_name":"is_a","term_name":"negative regulation of nervous system process","termid":"GO:0031645"},{"relation_name":"is_a","term_name":"regulation of transmission of nerve impulse","termid":"GO:0051969"},{"relation_name":"negatively_regulates","term_name":"transmission of nerve impulse","termid":"GO:0019226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of transmission of nerve impulse","synonyms":[{"name":"down regulation of transmission of nerve impulse","type":"exact"},{"name":"down-regulation of transmission of nerve impulse","type":"exact"},{"name":"downregulation of transmission of nerve impulse","type":"exact"},{"name":"inhibition of transmission of nerve impulse","type":"narrow"},{"name":"negative regulation of conduction of nerve impulse","type":"exact"}],"termid":"GO:0051970"}


id: MONDO:0004710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma in situ involving a uterus.","definition_xrefs":["MONDO:patterns/carcinoma_in_situ"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in situ carcinoma","termid":"MONDO:0004647"},{"relation_name":"is_a","term_name":"uterine carcinoma","termid":"MONDO:0005213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterus carcinoma in situ","secondary_identifiers":["SCTID:92788005","DOID:9108","MEDGEN:673127","ICD9:233.2","UMLS:C0686237"],"synonyms":[{"name":"carcinoma in situ of uterus","type":"exact"},{"name":"stage 0 uterus carcinoma","type":"exact"},{"name":"uterus in situ carcinoma","type":"exact"}],"termid":"MONDO:0004710","xrefs":{"Monarch":{"xref_id":"0004710"}}}


id: PBO:0063200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pterin-4 alpha-carbinolamine dehydratase 2","termid":"PBO:0063200"}


id: MONDO:0006743
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of the endocrine glands with species of mycobacterium, most often mycobacterium tuberculosis.","definition_xrefs":["MESH:D014383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"},{"relation_name":"is_a","term_name":"tuberculosis","termid":"MONDO:0018076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocrine tuberculosis","secondary_identifiers":["MEDGEN:52884","UMLS:C0041310"],"termid":"MONDO:0006743","xrefs":{"Monarch":{"xref_id":"0006743"}}}


id: MONDO:0016639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lower limb malformation-hypospadias syndrome is a rare developmental defect during embryogenesis characterized by severe, uni- or bilateral lower limb malformations (incl. tibial hypoplasia, split and rocker bottom-shaped feet, and oligosyndactyly), normal upper limbs and hypospadias. Additional dysmorphic features (e.g. short neck and low-set, large ears), atrial septal defect, ureteropelvic junction stenosis and slight septation of the spleen, have also been reported. There have been no further descriptions in the literature since 1977.","definition_xrefs":["Orphanet:2487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lower limb deficiency-hypospadias syndrome","secondary_identifiers":["MESH:C535640","UMLS:C2930962","MEDGEN:418952","GARD:18773"],"synonyms":[{"name":"Fried-Goldberg-Mundel syndrome","type":"exact"},{"name":"lower limb malformation-hypospadias syndrome","type":"related"}],"termid":"MONDO:0016639","xrefs":{"Monarch":{"xref_id":"0016639"}}}


id: GO:0097088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-17F due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["Wikipedia:Interleukin_17","GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-17 production","termid":"GO:0032620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-17F production","synonyms":[{"name":"IL-17F production","type":"exact"}],"termid":"GO:0097088"}


id: PBO:0028728
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_hercynylselenocysteine_level","termid":"PBO:0028728"}


id: GO:1903374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process whose specific outcome is the progression of a subarachnoid space over time, from its formation to the mature structure.","definition_xrefs":["GOC:TermGenie","GOC:cjm","Wikipedia:Subarachnoid_space","GO_REF:0000094"],"gene_count":0,"genotype_count":0,"name":"obsolete subarachnoid space development (obsolete GO:1903374)","synonyms":[{"name":"cavitas subarachnoidea development","type":"related"},{"name":"cavum subarachnoideale development","type":"related"},{"name":"spatium leptomeningeum development","type":"related"},{"name":"spatium subarachnoideum development","type":"related"},{"name":"subarachnoid cavity development","type":"related"}],"termid":"GO:1903374"}


id: PBO:0082517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the oligosaccharyltransferase complex of the ER lumen; complex catalyzes asparagine-linked glycosylation of newly synthesized proteins; forms a subcomplex with Ost3p and Ost4p","termid":"PBO:0082517"}


id: GO:0045665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of neuron differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of neuron differentiation","termid":"GO:0045664"},{"relation_name":"negatively_regulates","term_name":"neuron differentiation","termid":"GO:0030182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuron differentiation","synonyms":[{"name":"down regulation of neuron differentiation","type":"exact"},{"name":"down-regulation of neuron differentiation","type":"exact"},{"name":"downregulation of neuron differentiation","type":"exact"},{"name":"inhibition of neuron differentiation","type":"narrow"}],"termid":"GO:0045665"}


id: MONDO:0019483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Methotrexate-associated lymphoproliferative disorders are rare immunodeficiency-associated lymphoproliferative diseases characterized by lymphoid proliferation or lymphomas (large B-cell lymphoma, T-cell lymphoma, Hodgkin lymphoma, reactive lymphadenitis and a polymorphic post-transplant lymphoproliferative disorder) that develop in patients with different autoimmune diseases treated with methotrexate. Swelling is the predominant manifestation of the disease and regression after methotrexate withdrawal is observed in a significant proportion of patients.","definition_xrefs":["Orphanet:86904"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"},{"relation_name":"is_a","term_name":"immunodeficiency-associated lymphoproliferative disease","termid":"MONDO:0020083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"methotrexate-associated lymphoproliferative disorders","secondary_identifiers":["DOID:5821","GARD:19083","MEDGEN:233702","NCIT:C7184","icd11.foundation:1520483526","UMLS:C1334749"],"synonyms":[{"name":"MTX-LPD","type":"exact"},{"name":"MTX-associated lymphoproliferative disorders","type":"exact"},{"name":"methotrexate-associated lymphoproliferation","type":"exact"},{"name":"methotrexate-associated lymphoproliferative disorder","type":"exact"}],"termid":"MONDO:0019483","xrefs":{"Monarch":{"xref_id":"0019483"}}}


id: MONDO:0012786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Juvenile cataract - microcornea - renal glucosuria is an extremely rare autosomal dominant association reported in a single Swiss family and characterized clinically by juvenile cataract associated with bilateral microcornea, and renal glucosuria without other renal tubular defects.","definition_xrefs":["Orphanet:247794"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"disorder of carbohydrate transmembrane transport and absorption","termid":"MONDO:0017706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0000426","MONDO:0037792"],"is_obsolete":false,"name":"juvenile cataract-microcornea-renal glucosuria syndrome","secondary_identifiers":["GARD:17196","MEDGEN:934773","SCTID:722457005","UMLS:C4310806","OMIM:612018","MESH:C567434","DOID:0070353"],"synonyms":[{"name":"CJMG","type":"related"},{"name":"CTRCT47","type":"related"},{"name":"cataract 47","type":"related"},{"name":"cataract 47, juvenile, with microcornea","type":"exact"},{"name":"cataract, juvenile, with microcornea","type":"related"},{"name":"cataract, juvenile, with microcornea and glucosuria","type":"related"},{"name":"cataract, juvenile, with microcornea and glucosuria, formerly","type":"related"},{"name":"juvenile cataract-microcornea-renal glucosuria syndrome","type":"exact"}],"termid":"MONDO:0012786","xrefs":{"Monarch":{"xref_id":"0012786"}}}


id: GO:0045268
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The hexamer that possesses the catalytic activity of the plasma membrane hydrogen-transporting ATP synthase. Examples of this component are found in Bacterial species.","definition_xrefs":["GOC:mtg_sensu","PMID:10838056"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane proton-transporting ATP synthase, catalytic core (obsolete GO:0045268)","synonyms":[{"name":"hydrogen-transporting ATP synthase, catalytic core","type":"broad"},{"name":"proton-transporting ATP synthase, catalytic core","type":"broad"}],"termid":"GO:0045268"}


id: GO:1904737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fatty acid beta-oxidation using acyl-CoA dehydrogenase.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25416781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fatty acid beta-oxidation","termid":"GO:0032000"},{"relation_name":"is_a","term_name":"regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","termid":"GO:1904735"},{"relation_name":"positively_regulates","term_name":"fatty acid beta-oxidation using acyl-CoA dehydrogenase","termid":"GO:0033539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","synonyms":[{"name":"activation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","type":"narrow"},{"name":"up regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","type":"exact"},{"name":"up-regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","type":"exact"},{"name":"upregulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","type":"exact"}],"termid":"GO:1904737"}


id: PBO:0039994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 8B","termid":"PBO:0039994"}


id: PBO:0053050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARP7 pseudogene 1","termid":"PBO:0053050"}


id: GO:0048329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of axial mesoderm cell fate specification.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mesodermal cell fate specification","termid":"GO:0042662"},{"relation_name":"is_a","term_name":"regulation of axial mesodermal cell fate specification","termid":"GO:0048328"},{"relation_name":"negatively_regulates","term_name":"axial mesodermal cell fate specification","termid":"GO:0048327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of axial mesodermal cell fate specification","synonyms":[{"name":"down regulation of axial mesodermal cell fate specification","type":"exact"},{"name":"down-regulation of axial mesodermal cell fate specification","type":"exact"},{"name":"downregulation of axial mesodermal cell fate specification","type":"exact"},{"name":"inhibition of axial mesodermal cell fate specification","type":"narrow"}],"termid":"GO:0048329"}


id: PBO:0051029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor binding protein like 1","termid":"PBO:0051029"}


id: PBO:0054055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1397","termid":"PBO:0054055"}


id: GO:0002800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antifungal peptide secretion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antifungal peptide production","termid":"GO:0002788"},{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide secretion","termid":"GO:0002794"},{"relation_name":"regulates","term_name":"antifungal peptide secretion","termid":"GO:0002782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006810"],"is_obsolete":false,"name":"regulation of antifungal peptide secretion","termid":"GO:0002800"}


id: PBO:0074999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-10","termid":"PBO:0074999"}


id: PBO:0111853
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fun thirty family","termid":"PBO:0111853"}


id: PBO:0027134
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_telomere-nuclear_envelope_distance_during_mitotic_G2_phase","termid":"PBO:0027134"}


id: MONDO:0013906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amelogenesis imperfecta in which the cause of the disease is a mutation in the ODAPH gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta type 2","termid":"MONDO:0015048"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta hypomaturation type 2A4","secondary_identifiers":["GARD:15847","MEDGEN:766744","DOID:0110062","UMLS:C3553830","OMIM:614832"],"synonyms":[{"name":"AI2A4","type":"exact"},{"name":"ODAPH amelogenesis imperfecta","type":"exact"},{"name":"amelogenesis imperfecta caused by mutation in ODAPH","type":"exact"},{"name":"amelogenesis imperfecta hypomaturation type IIA4","type":"exact"},{"name":"amelogenesis imperfecta type IIA4","type":"exact"},{"name":"amelogenesis imperfecta, hypomaturation type, IIA4","type":"related"},{"name":"amelogenesis imperfecta, type IIA4","type":"exact"}],"termid":"MONDO:0013906","xrefs":{"Monarch":{"xref_id":"0013906"}}}


id: PBO:0083790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in the TOR signaling pathway; physically associates with the protein phosphatase 2A and the SIT4 protein phosphatase catalytic subunits","termid":"PBO:0083790"}


id: PBO:0060719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A8","termid":"PBO:0060719"}


id: GO:0070704
data:
  {"annotated_genes":["SJAG_03249","SJAG_00717","SJAG_03509"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000249"},{"annotations":[107020,89136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000248"},{"annotations":[89137,107021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050046"}]},"cv_name":"molecular_function","definition":"Catalysis of the introduction of a double bond into a sterol molecule.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00717":null,"SJAG_03249":null,"SJAG_03509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"sterol desaturase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070704","terms_by_termid":{"GO:0000248":null,"GO:0000249":null,"GO:0050046":null}}


id: MONDO:0030749
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"junctional epidermolysis bullosa","termid":"MONDO:0017612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa, junctional 3B, severe","secondary_identifiers":["OMIM:619786","MEDGEN:1807897","UMLS:C5676939"],"synonyms":[{"name":"JEB3B","type":"exact"},{"name":"epidermolysis bullosa, junctional 3B, generalised severe","type":"exact"},{"name":"epidermolysis bullosa, junctional 3B, generalized severe","type":"exact"},{"name":"epidermolysis bullosa, junctional 3B, herlitz IIA","type":"exact"},{"name":"epidermolysis bullosa, junctional 3B, severe","type":"exact"}],"termid":"MONDO:0030749","xrefs":{"Monarch":{"xref_id":"0030749"}}}


id: GO:0044459
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the plasma membrane, the membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane part (obsolete GO:0044459)","termid":"GO:0044459"}


id: PR:O13784
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps2401 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S24-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.06","synonyms":[{"name":"Spom972h-rps2401","type":"exact"}],"termid":"PR:O13784"}


id: PR:Q874R4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pfl3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q874R4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell agglutination protein C947.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.04","synonyms":[{"name":"Spom972h-pfl3","type":"exact"}],"termid":"PR:Q874R4"}


id: GO:0033628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of cell adhesion mediated by integrin.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell adhesion","termid":"GO:0030155"},{"relation_name":"regulates","term_name":"cell adhesion mediated by integrin","termid":"GO:0033627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of cell adhesion mediated by integrin","synonyms":[{"name":"regulation of cell adhesion mediated by integrin complex","type":"exact"}],"termid":"GO:0033628"}


id: GO:0015023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete syndecan (obsolete GO:0015023)","synonyms":[{"name":"syndecan","type":"exact"}],"termid":"GO:0015023"}


id: PBO:0052354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 5A","termid":"PBO:0052354"}


id: MONDO:0042973
data:
  {"annotated_genes":["SJAG_00516","SJAG_01181","SJAG_01183","SJAG_00993","SJAG_02342"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009815"},{"annotations":[84977,84975,84976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007970"},{"annotations":[86049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957262"}]},"cv_name":"mondo","definition":"An instance of osteosclerosis that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteosclerosis","termid":"MONDO:0002933"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00516":null,"SJAG_00993":null,"SJAG_01181":null,"SJAG_01183":null,"SJAG_02342":null},"genotype_count":0,"is_obsolete":false,"name":"familial osteosclerosis","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"hereditary osteosclerosis","type":"exact"}],"termid":"MONDO:0042973","terms_by_termid":{"MONDO:0007970":null,"MONDO:0009815":null,"MONDO:0957262":null},"xrefs":{"Monarch":{"xref_id":"0042973"}}}


id: MONDO:0011568
data:
  {"annotated_genes":["SJAG_05175","SJAG_04706","SJAG_04295","SJAG_05182","SJAG_02139"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84992,84993,84994,84995,84996],"is_not":false,"summary":null,"term":"MONDO:0011568"}]},"cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the SLC17A8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02139":null,"SJAG_04295":null,"SJAG_04706":null,"SJAG_05175":null,"SJAG_05182":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 25","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1854158","DOID:0110555","GARD:18112","MEDGEN:344221","MESH:C565319","OMIM:605583"],"synonyms":[{"name":"DFNA25","type":"narrow"},{"name":"SLC17A8 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 25","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 25","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in SLC17A8","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 25","type":"narrow"},{"name":"deafness, autosomal dominant 25","type":"narrow"},{"name":"deafness, autosomal dominant type 25","type":"narrow"}],"termid":"MONDO:0011568","terms_by_termid":{"MONDO:0011568":null},"xrefs":{"Monarch":{"xref_id":"0011568"}}}


id: GO:0047828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-lyxose = D-xylulose.","definition_xrefs":["RHEA:14201","EC:5.3.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"D-lyxose ketol-isomerase activity","secondary_identifiers":["MetaCyc:D-LYXOSE-KETOL-ISOMERASE-RXN","KEGG_REACTION:R01898"],"synonyms":[{"name":"D-lyxose aldose-ketose-isomerase activity","type":"related"},{"name":"D-lyxose isomerase activity","type":"related"}],"termid":"GO:0047828"}


id: GO:0006923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The proteolytic degradation of cytoskeletal proteins that contributes to apoptosis, leading to the collapse of cytoskeletal structures.","definition_xrefs":["GOC:tb","GOC:mah","GOC:dph","GOC:mtg_apoptosis","ISBN:0815332181"],"gene_count":0,"genotype_count":0,"name":"obsolete cleavage of cytoskeletal proteins involved in execution phase of apoptosis (obsolete GO:0006923)","synonyms":[{"name":"apoptotic cleavage of cytoskeletal proteins","type":"exact"},{"name":"cleavage of cytoskeletal proteins involved in apoptosis","type":"broad"},{"name":"cleavage of cytoskeletal proteins involved in execution phase of apoptosis","type":"exact"}],"termid":"GO:0006923"}


id: GO:0072352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dicarboxylic acids, any organic acid containing three carboxyl (-COOH) groups.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"tricarboxylic acid metabolic process","termid":"GO:0072350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"tricarboxylic acid catabolic process","synonyms":[{"name":"tricarboxylate catabolic process","type":"exact"},{"name":"tricarboxylate catabolism","type":"exact"},{"name":"tricarboxylic acid breakdown","type":"exact"},{"name":"tricarboxylic acid catabolism","type":"exact"},{"name":"tricarboxylic acid degradation","type":"exact"}],"termid":"GO:0072352"}


id: PBO:0038959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adipose secreted signaling protein","termid":"PBO:0038959"}


id: PBO:0002786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA hydrolase (predicted)","termid":"PBO:0002786"}


id: PBO:0074291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT and NTRK like family member 6","termid":"PBO:0074291"}


id: MONDO:0007584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Exostoses-anetodermia-brachydactyly type E syndrome is an association reported in a single kindred characterized by the variable presence of the following features: anetodermia (macular atrophy of the skin), multiple exostoses, and brachydactyly type E. There have been no further descriptions in the literature since 1985.","definition_xrefs":["Orphanet:1962"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exostoses-anetodermia-brachydactyly type E syndrome","secondary_identifiers":["MEDGEN:338695","GARD:2202","UMLS:C1851428","OMIM:133690","MESH:C565034"],"synonyms":[{"name":"exostoses with anetodermia and brachydactyly, type E","type":"related"}],"termid":"MONDO:0007584","xrefs":{"Monarch":{"xref_id":"0007584"}}}


id: PBO:0055615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3054","termid":"PBO:0055615"}


id: PBO:0057392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548e","termid":"PBO:0057392"}


id: GO:1901186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ERBB signaling pathway.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of ERBB signaling pathway","termid":"GO:1901184"},{"relation_name":"positively_regulates","term_name":"ERBB signaling pathway","termid":"GO:0038127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of ERBB signaling pathway","synonyms":[{"name":"activation of EGF receptor family signaling pathway","type":"exact"},{"name":"activation of EGFR family signaling pathway","type":"related"},{"name":"activation of ERBB signaling pathway","type":"narrow"},{"name":"activation of ERBB signalling pathway","type":"exact"},{"name":"activation of ErbB signaling","type":"exact"},{"name":"positive regulation of EGF receptor family signaling pathway","type":"exact"},{"name":"positive regulation of EGFR family signaling pathway","type":"related"},{"name":"positive regulation of ERBB signalling pathway","type":"exact"},{"name":"positive regulation of ErbB signaling","type":"exact"},{"name":"up regulation of EGF receptor family signaling pathway","type":"exact"},{"name":"up regulation of EGFR family signaling pathway","type":"related"},{"name":"up regulation of ERBB signaling pathway","type":"exact"},{"name":"up regulation of ERBB signalling pathway","type":"exact"},{"name":"up regulation of ErbB signaling","type":"exact"},{"name":"up-regulation of EGF receptor family signaling pathway","type":"exact"},{"name":"up-regulation of EGFR family signaling pathway","type":"related"},{"name":"up-regulation of ERBB signaling pathway","type":"exact"},{"name":"up-regulation of ERBB signalling pathway","type":"exact"},{"name":"up-regulation of ErbB signaling","type":"exact"},{"name":"upregulation of EGF receptor family signaling pathway","type":"exact"},{"name":"upregulation of EGFR family signaling pathway","type":"related"},{"name":"upregulation of ERBB signaling pathway","type":"exact"},{"name":"upregulation of ERBB signalling pathway","type":"exact"},{"name":"upregulation of ErbB signaling","type":"exact"}],"termid":"GO:1901186"}


id: PBO:0090730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S12 Mrps12a","termid":"PBO:0090730"}


id: GO:0102816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + delphinidin 3-O-glucosyl-5-O-caffeoylglucoside = H+ + delphinidin 3-O-glucosyl-5-O-(caffeoylglucoside-3'-O-glucoside) + UDP.","definition_xrefs":["EC:2.4.1.298","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"UDP-D-glucose:delphinidin 3-O-glucosyl-5-O-caffeoylglucoside -O-beta-D-glucosyltransferase activity","secondary_identifiers":["RHEA:35423","MetaCyc:RXN-8234"],"termid":"GO:0102816"}


id: GO:0072703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methyl methanesulfonate (MMS) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to methyl methanesulfonate","termid":"GO:0072702"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to methyl methanesulfonate","synonyms":[{"name":"cellular response to MMS","type":"exact"}],"termid":"GO:0072703"}


id: GO:0033819
data:
  {"annotated_genes":["SJAG_01271"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97356],"is_not":false,"summary":null,"term":"GO:0033819"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl-[protein] + octanoyl-[ACP] = H+ + holo-[ACP] + N6-octanoyl-L-lysyl-[protein].","definition_xrefs":["RHEA:17665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01271":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0140096","GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"lipoyl(octanoyl) transferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN0-947","Reactome:R-HSA-6793590","GO:0102555","EC:2.3.1.181"],"synonyms":[{"name":"lipoate/octanoate transferase activity","type":"exact"},{"name":"lipoyl (octanoyl)-acyl carrier protein:protein transferase activity","type":"exact"},{"name":"lipoyl (octanoyl)-acyl-carrier-protein-protein N-lipoyltransferase activity","type":"exact"},{"name":"octanoyl transferase activity (acting on glycine-cleavage complex H protein)","type":"narrow"},{"name":"octanoyl-acyl carrier protein-protein N-octanoyltransferase activity","type":"exact"},{"name":"octanoyl-acyl-carrier-protein-protein N-octanoyltransferase activity","type":"exact"},{"name":"octanoyl-acyl-carrier-protein:protein N-octanoyltransferase activity","type":"exact"}],"termid":"GO:0033819","terms_by_termid":{"GO:0033819":null}}


id: PBO:0035891
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_phosphatidylserine_externalization","termid":"PBO:0035891"}


id: MONDO:0024581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0024581 (obsolete MONDO:0024581)","termid":"MONDO:0024581","xrefs":{"Monarch":{"xref_id":"0024581"}}}


id: GO:0033337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the dorsal fin over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medial fin development","termid":"GO:0033338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal fin development","termid":"GO:0033337"}


id: MONDO:0020709
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory and granulomatous, dermatophytic infection that is classified into two forms, depending on the affected individual’s health situation and clinical picture. The first form is mainly observed in healthy individuals and is defined as a perifollicular, papular form induced by penetrating trauma that is mostly observed in the lower extremities. The second form is granulomatous, related to immunosuppression, seen in a nodular form, and usually appears on the upper extremities.","definition_xrefs":["doi:10.2147/IDR.S145027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatophytosis","termid":"MONDO:0004678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Majocchi granuloma","synonyms":[{"name":"Majocchi's granuloma","type":"exact"}],"termid":"MONDO:0020709","xrefs":{"Monarch":{"xref_id":"0020709"}}}


id: MONDO:0033365
data:
  {"annotated_genes":["SJAG_02266","SJAG_02576"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84741,84742],"is_not":false,"summary":null,"term":"MONDO:0033365"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02266":null,"SJAG_02576":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 56","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080282","OMIM:617665","MEDGEN:1621755","UMLS:C4540034"],"synonyms":[{"name":"DEE56","type":"exact"},{"name":"EIEE56","type":"exact"},{"name":"developmental and epileptic encephalopathy 56","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 56","type":"exact"},{"name":"infantile epileptic encephalopathy 56","type":"exact"}],"termid":"MONDO:0033365","terms_by_termid":{"MONDO:0033365":null},"xrefs":{"Monarch":{"xref_id":"0033365"}}}


id: PBO:0071243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 84","termid":"PBO:0071243"}


id: PBO:0059836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial fission regulator 1 like","termid":"PBO:0059836"}


id: GO:1904998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of leukocyte adhesion to arterial endothelial cell.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","PMID:22267480","GOC:TermGenie","GOC:bc","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte adhesion to vascular endothelial cell","termid":"GO:1904995"},{"relation_name":"is_a","term_name":"regulation of leukocyte adhesion to arterial endothelial cell","termid":"GO:1904997"},{"relation_name":"negatively_regulates","term_name":"leukocyte adhesion to arterial endothelial cell","termid":"GO:0061757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of leukocyte adhesion to arterial endothelial cell","synonyms":[{"name":"down regulation of leukocyte adhesion to arterial endothelial cell","type":"exact"},{"name":"down-regulation of leukocyte adhesion to arterial endothelial cell","type":"exact"},{"name":"downregulation of leukocyte adhesion to arterial endothelial cell","type":"exact"},{"name":"inhibition of leukocyte adhesion to arterial endothelial cell","type":"narrow"}],"termid":"GO:1904998"}


id: PBO:0067851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 153","termid":"PBO:0067851"}


id: PBO:0050289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNF1 homeobox B","termid":"PBO:0050289"}


id: GO:1905549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of subtelomeric heterochromatin assembly.","definition_xrefs":["GOC:nc","GO_REF:0000058","GOC:BHF_telomere","GOC:TermGenie","GOC:BHF","PMID:25819580"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of subtelomeric heterochromatin assembly (obsolete GO:1905549)","synonyms":[{"name":"activation of telomeric heterochromatin assembly","type":"narrow"},{"name":"activation of telomeric heterochromatin formation","type":"narrow"},{"name":"positive regulation of telomeric heterochromatin assembly","type":"related"},{"name":"positive regulation of telomeric heterochromatin formation","type":"related"},{"name":"up regulation of telomeric heterochromatin assembly","type":"related"},{"name":"up regulation of telomeric heterochromatin formation","type":"related"},{"name":"up-regulation of telomeric heterochromatin assembly","type":"related"},{"name":"up-regulation of telomeric heterochromatin formation","type":"related"},{"name":"upregulation of telomeric heterochromatin assembly","type":"related"},{"name":"upregulation of telomeric heterochromatin formation","type":"related"}],"termid":"GO:1905549"}


id: GO:0060585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of prostaglandin-endoperoxide synthase activity. Prostaglandin-endoperoxide synthase activity is the catalysis of the reaction: arachidonate + donor-H2 + 2 O2 = prostaglandin H2 + acceptor + H2O.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of oxidoreductase activity","termid":"GO:0051353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of prostaglandin-endoperoxide synthase activity","synonyms":[{"name":"positive regulation of (PG)H synthase activity","type":"related"},{"name":"positive regulation of PG synthetase activity","type":"related"},{"name":"positive regulation of fatty acid cyclooxygenase activity","type":"related"},{"name":"positive regulation of prostaglandin synthetase activity","type":"related"}],"termid":"GO:0060585"}


id: PBO:0005390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIP41-like type 2a phosphatase regulator Tip41","termid":"PBO:0005390"}


id: MONDO:0018450
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinal muscular atrophy with respiratory distress type 2 is a rare, genetic, motor neuron disease characterized by progressive early respiratory failure associated with diaphragm paralysis, distal muscular weakness, joint contractures, and axial hypotonia with preserved antigravity limb movements. Phenotype overlaps considerably with SMARD type 1 but is differentiated by a mutation in a different gene.","definition_xrefs":["Orphanet:404521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal muscular atrophy","termid":"MONDO:0001516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spinal muscular atrophy with respiratory distress type 2","secondary_identifiers":["GARD:21723","MEDGEN:1658540","UMLS:C4749434"],"synonyms":[{"name":"SMARD2","type":"exact"},{"name":"X-linked spinal muscular atrophy with respiratory distress","type":"exact"},{"name":"diaphragmatic spinal muscular atrophy type 2","type":"exact"},{"name":"severe infantile axonal neuropathy with respiratory failure type 2","type":"exact"}],"termid":"MONDO:0018450","xrefs":{"Monarch":{"xref_id":"0018450"}}}


id: GO:0051871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to dihydrofolic acid, a folic acid in which the bicyclic pteridine structure is in the dihydro, partially reduced form; they are intermediates in folate metabolism and are reduced to their tetrahydro, reduced forms.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"modified amino acid binding","termid":"GO:0072341"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"dihydrofolic acid binding","synonyms":[{"name":"DHF binding","type":"related"},{"name":"dihydrofolate binding","type":"related"}],"termid":"GO:0051871"}


id: MONDO:0100031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic focal epilepsy, with focal sensory auditory seizures seen in family members. Seizures often comprise such mild symptoms that they are undiagnosed. There are no implications expected for development or learning and seizures are typically infrequent and well controlled.","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant epilepsy with auditory features","termid":"MONDO:0010898"},{"relation_name":"is_a","term_name":"adolescent/adult-onset epilepsy syndrome","termid":"MONDO:0100030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"adolescent/adult onset autosomal dominant epilepsy with auditory features","synonyms":[{"name":"autosomal dominant partial/lateral temporal epilepsy with auditory features","type":"exact"}],"termid":"MONDO:0100031","xrefs":{"Monarch":{"xref_id":"0100031"}}}


id: PR:O14097
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- saf2 gene.","definition_xrefs":["UniProtKB:O14097","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain-containing protein C2F3.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.14c","synonyms":[{"name":"Spom972h-saf2","type":"exact"}],"termid":"PR:O14097"}


id: PBO:0052076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin regulatory subunit B1 like 1 pseudogene 1","termid":"PBO:0052076"}


id: MONDO:0012105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A small-vessel necrotizing vasculitis characterized by the association of inflammation of the vessel wall and peri- and extravascular granulomatosis.","definition_xrefs":["Orphanet:900"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"glomerulonephritis","termid":"MONDO:0002462"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"anti-neutrophil cytoplasmic antibody-associated vasculitis","termid":"MONDO:0015492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005240"],"is_obsolete":false,"name":"granulomatosis with polyangiitis","secondary_identifiers":["OMIM:608710","SCTID:195353004","ICD10CM:M31.3","UMLS:C3495801","icd11.foundation:1020056159","NANDO:1200263","MedDRA:10047888","NCIT:C123111","EFO:0005297","NCIT:C3444","DOID:12132","ICD9:446.4","MEDGEN:811223","GARD:7880","MESH:D014890","NANDO:1201009","NANDO:2200424","NORD:1840"],"synonyms":[{"name":"ANCA-associated vasculitis","type":"broad"},{"name":"GPA","type":"exact"},{"name":"Midline granulomatosis","type":"related"},{"name":"Wegener granulomatosis","type":"exact"},{"name":"Wegener's granulomatosis","type":"exact"},{"name":"Wegener's syndrome","type":"exact"},{"name":"Wg","type":"broad"},{"name":"granulomatosis - Wegener's","type":"exact"},{"name":"granulomatosis with polyangiitis","type":"exact"},{"name":"necrotizing respiratory granulomatosis","type":"exact"},{"name":"pauci-immune glomerulonephritis associated with granulomatosis with polyangiitis","type":"exact"}],"termid":"MONDO:0012105","xrefs":{"Monarch":{"xref_id":"0012105"}}}


id: GO:0050814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of epothilone, a drug obtained from the myxobacteria Sporangium cellulosum that interferes with cell division. Some epothilones are being studied as treatments for cancer.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macrolide biosynthetic process","termid":"GO:0033068"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"epothilone metabolic process","termid":"GO:0050813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"epothilone biosynthetic process","synonyms":[{"name":"epothilone anabolism","type":"exact"},{"name":"epothilone biosynthesis","type":"exact"},{"name":"epothilone formation","type":"exact"},{"name":"epothilone synthesis","type":"exact"}],"termid":"GO:0050814"}


id: GO:0102143
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: carboxynorspermidine + H2O + NADP+ = H+ + L-aspartate 4-semialdehyde + NADPH + propane-1,3-diamine. Also converts carboxyspermidine to putrescine.","definition_xrefs":["EC:1.5.1.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"carboxynorspermidine dehydrogenase activity","synonyms":[{"name":"carboxynorspermidine dehydrogenase I activity","type":"narrow"},{"name":"carboxynorspermidine dehydrogenase II activity","type":"narrow"}],"termid":"GO:0102143"}


id: MONDO:0017702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glycerol kinase deficiency (obsolete MONDO:0017702)","termid":"MONDO:0017702","xrefs":{"Monarch":{"xref_id":"0017702"}}}


id: PBO:0067742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 41","termid":"PBO:0067742"}


id: PBO:0077849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triosephosphate isomerase 1","termid":"PBO:0077849"}


id: PBO:0028795
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_binding_at_mating-type_region_replication_fork_barrier","termid":"PBO:0028795"}


id: GO:0043802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 L-glutamine + 2 ATP + 2 H2O + hydrogenobyrinate = 2 L-glutamate + 2 ADP + 4 H+ + hydrogenobyrinate a,c-diamide + 2 phosphate.","definition_xrefs":["RHEA:12544","EC:6.3.5.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) activity","secondary_identifiers":["MetaCyc:R341-RXN","KEGG_REACTION:R05224"],"synonyms":[{"name":"CobB","type":"related"},{"name":"hydrogenobyrinic acid a,c diamide synthase (glutamine-hydrolysing) activity","type":"exact"},{"name":"hydrogenobyrinic-acid:L-glutamine amido-ligase (AMP-forming)","type":"exact"}],"termid":"GO:0043802"}


id: GO:0044302
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Hippocampal mossy fiber produced by dentate gyrus granule cells.","definition_xrefs":["NIF_Subcellular:nlx_subcell_20090601","PMID:17765709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hippocampal mossy fiber","termid":"GO:0097457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dentate gyrus mossy fiber","synonyms":[{"name":"dentate gyrus mossy fibre","type":"exact"},{"name":"granule cell axon","type":"broad"}],"termid":"GO:0044302"}


id: GO:0050689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any host process that results in the inhibition of antiviral immune response mechanisms, thereby facilitating viral replication. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:dph","GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of defense response to virus","termid":"GO:0050687"},{"relation_name":"is_a","term_name":"regulation of defense response to virus by host","termid":"GO:0050691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of defense response to virus by host","synonyms":[{"name":"down regulation of antiviral response by host","type":"exact"},{"name":"down-regulation of antiviral response by host","type":"exact"},{"name":"downregulation of antiviral response by host","type":"exact"},{"name":"inhibition of antiviral response by host","type":"narrow"},{"name":"negative regulation by host of antiviral response","type":"exact"},{"name":"negative regulation of antiviral response by host","type":"exact"}],"termid":"GO:0050689"}


id: GO:0047361
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphomannan(n) + GDP-mannose = phosphomannan(n+1) + GMP.","definition_xrefs":["EC:2.7.8.9","MetaCyc:2.7.8.9-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016780"}],"interesting_parent_ids":["GO:0016780","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"phosphomannan mannosephosphotransferase activity","synonyms":[{"name":"GDP-mannose:phosphomannan mannose phosphotransferase activity","type":"related"}],"termid":"GO:0047361"}


id: PBO:0091790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, probable 5' UTR of SPBC365.16","termid":"PBO:0091790"}


id: PBO:0081658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF582 divergent transcript","termid":"PBO:0081658"}


id: GO:0106174
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of a phagolysosome.","definition_xrefs":["PMID:29471269","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar lumen","termid":"GO:0005775"},{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"is_a","term_name":"phagocytic vesicle lumen","termid":"GO:0097013"},{"relation_name":"part_of","term_name":"phagolysosome","termid":"GO:0032010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005575","GO:0005773","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"phagolysosome vesicle lumen","termid":"GO:0106174"}


id: PBO:0091242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylic acid transmembrane transporter","termid":"PBO:0091242"}


id: MONDO:0000127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Geleophysic dysplasia is a rare skeletal dysplasia characterized by short stature, prominent abnormalities in hands and feet, and a characteristic facial appearance (described as \\\"happy'').","definition_xrefs":["Orphanet:2623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acromelic dysplasia","termid":"MONDO:0019695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geleophysic dysplasia","secondary_identifiers":["SCTID:28557005","GARD:2449","OMIMPS:231050","MEDGEN:483679","ICD9:759.89","UMLS:C3489726","icd11.foundation:518828851","MedDRA:10063361","DOID:0111724"],"synonyms":[{"name":"geleophysic dwarfism","type":"exact"},{"name":"geleophysic dwarfism syndrome","type":"related"}],"termid":"MONDO:0000127","xrefs":{"Monarch":{"xref_id":"0000127"}}}


id: PBO:0077733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNS1 antisense RNA 1","termid":"PBO:0077733"}


id: PBO:0073816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC6A17 antisense RNA 1","termid":"PBO:0073816"}


id: MONDO:0019579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Discrete papular lichen myxedematosus is a rare chronic, slowly progressive form of localized lichen myxedematosus characterized by the development of a few to multiple small symmetrical skin-coloured mucinous papules on the limbs and trunk.","definition_xrefs":["Orphanet:90394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localized lichen myxedematosus","termid":"MONDO:0019446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"discrete papular lichen myxedematosus","secondary_identifiers":["MEDGEN:898313","UMLS:C4273967","GARD:19138","SCTID:717258005"],"termid":"MONDO:0019579","xrefs":{"Monarch":{"xref_id":"0019579"}}}


id: PBO:0031798
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_G2/M_phase_transition_(obsolete_FYPO:0000403)","termid":"PBO:0031798"}


id: PBO:0002529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC transporter Ybt1","termid":"PBO:0002529"}


id: MONDO:0042908
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Schaap-Taylor-Baraitser syndrome (obsolete MONDO:0042908)","termid":"MONDO:0042908","xrefs":{"Monarch":{"xref_id":"0042908"}}}


id: PBO:0035835
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K4_dimethylation_during_vegetative_growth","termid":"PBO:0035835"}


id: GO:0019790
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquitin-like hydrolase activity (obsolete GO:0019790)","synonyms":[{"name":"ubiquitin-like hydrolase activity","type":"exact"}],"termid":"GO:0019790"}


id: MONDO:0003228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myelodysplastic/myeloproliferative neoplasm (obsolete MONDO:0003228)","termid":"MONDO:0003228","xrefs":{"Monarch":{"xref_id":"0003228"}}}


id: PBO:0041664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cactin, spliceosome C complex subunit","termid":"PBO:0041664"}


id: GO:0010557
data:
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id: MOD:01914
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id: PBO:0083012
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id: FYPO:0004113
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id: GO:0160074
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id: MONDO:0016301
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id: GO:1904803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any regulation of translation that is involved in cellular response to UV.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","PMID:17369398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"},{"relation_name":"part_of","term_name":"cellular response to UV","termid":"GO:0034644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of translation involved in cellular response to UV","synonyms":[{"name":"regulation of protein anabolism involved in cellular response to UV","type":"exact"},{"name":"regulation of protein biosynthesis involved in cellular response to UV","type":"exact"},{"name":"regulation of protein formation involved in cellular response to UV","type":"exact"},{"name":"regulation of protein synthesis involved in cellular response to UV","type":"exact"},{"name":"regulation of translation involved in cellular response to UV light stimulus","type":"exact"},{"name":"regulation of translation involved in cellular response to UV radiation stimulus","type":"exact"},{"name":"regulation of translation involved in cellular response to ultraviolet light stimulus","type":"exact"},{"name":"regulation of translation involved in cellular response to ultraviolet radiation stimulus","type":"exact"}],"termid":"GO:1904803"}


id: PBO:0084646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microtubule plus end-tracking protein; forms a complex with Kar9p that makes up the cortical microtubule capture site and delays the exit from mitosis when the spindle is oriented abnormally; homolog of human end binding protein 1 (EB1)","termid":"PBO:0084646"}


id: PATO:0001065
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001065 relative stiffness (obsolete PATO:0001065)","termid":"PATO:0001065"}


id: PBO:0058288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4663","termid":"PBO:0058288"}


id: _global:has_cross_section
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"s3 has_cross_section s3 if and only if : there exists some 2d plane that intersects the bearer of s3, and the impression of s3 upon that plane has shape quality s2.","definition_xrefs":["PATOC:CJM"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_cross_section","termid":"_global:has_cross_section"}


id: PBO:0034524
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_bundle_during_G0_to_G1_transition","termid":"PBO:0034524"}


id: MONDO:0005958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sex cord-stromal tumor (obsolete MONDO:0005958)","termid":"MONDO:0005958","xrefs":{"Monarch":{"xref_id":"0005958"}}}


id: GO:2001208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of transcription elongation mediated by RNA polymerase I.","definition_xrefs":["PMID:20299458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transcription by RNA polymerase I","termid":"GO:0016479"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription, elongation","termid":"GO:0032785"},{"relation_name":"is_a","term_name":"regulation of transcription elongation by RNA polymerase I","termid":"GO:2001207"},{"relation_name":"negatively_regulates","term_name":"transcription elongation by RNA polymerase I","termid":"GO:0006362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006355","GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of transcription elongation by RNA polymerase I","synonyms":[{"name":"negative regulation of RNA elongation from Pol I promoter","type":"exact"},{"name":"negative regulation of transcription elongation from RNA polymerase I promoter","type":"exact"}],"termid":"GO:2001208"}


id: PR:O14328
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ksp1 gene.","definition_xrefs":["UniProtKB:O14328","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ksp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.13","synonyms":[{"name":"Spom972h-ksp1","type":"exact"},{"name":"serine/threonine-protein kinase ppk20 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14328"}


id: PBO:0055646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3085","termid":"PBO:0055646"}


id: SO:0000866
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A frameshift caused by deleting one base.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift","termid":"SO:0000865"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus_1_frameshift","synonyms":[{"name":"minus 1 frameshift","type":"exact"}],"termid":"SO:0000866"}


id: SO:0000717
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A nucleic acid sequence that when read as sequential triplets, has the potential of encoding a sequential string of amino acids. It need not contain the start or stop codon.","definition_xrefs":["SGD:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reading_frame","secondary_identifiers":["http://en.wikipedia.org/wiki/Reading_frame"],"synonyms":[{"name":"reading frame","type":"exact"}],"termid":"SO:0000717"}


id: PBO:0068308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 11 pseudogene 1","termid":"PBO:0068308"}


id: MONDO:0024627
data:
  {"annotated_genes":["SJAG_04743","SJAG_00739","SJAG_01351"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009947"},{"annotations":[85700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009284"},{"annotations":[85553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010600"},{"annotations":[86201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044208"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00739":null,"SJAG_01351":null,"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"phagocytic cell dysfunction","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0398732","SCTID:302874002","MEDGEN:585044"],"synonyms":[{"name":"defective phagocytosis","type":"exact"},{"name":"phagocytic cell dysfunction","type":"exact"}],"termid":"MONDO:0024627","terms_by_termid":{"MONDO:0009284":null,"MONDO:0009947":null,"MONDO:0010600":null,"MONDO:0044208":null},"xrefs":{"Monarch":{"xref_id":"0024627"}}}


id: PR:P14965
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ura4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P14965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orotidine 5'-phosphate decarboxylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.05c","synonyms":[{"name":"OMP decarboxylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"OMPDCase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"OMPdecase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ura4","type":"exact"},{"name":"UMP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"uridine 5'-monophosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P14965"}


id: PATO:0002381
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in an bearer by virtue of the presence of long chain aliphatic lipids on the surface of an organism.","definition_xrefs":["PATOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"waxiness","termid":"PATO:0002381"}


id: FYPO:0005979
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin filament bundle organization is abnormal. The process normally results in the assembly, arrangement of constituent parts, or disassembly of an actin filament bundle. Actin filament bundles are assemblies of actin filaments organized along a single axis.","definition_xrefs":["GO:0061572","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin filament organization during vegetative growth","termid":"FYPO:0000727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0004803","FYPO:0001320"],"is_obsolete":false,"name":"abnormal actin filament bundle organization","synonyms":[{"name":"abnormal actin filament bundle organisation during vegetative growth","type":"exact"},{"name":"abnormal actin filament bundle organization during mitotic cell cycle","type":"related"},{"name":"abnormal actin filament bundle organization during vegetative growth","type":"exact"}],"termid":"FYPO:0005979"}


id: GO:0018772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4,6-trioxoheptanoate + H2O = acetylpyruvate + acetate.","definition_xrefs":["UM-BBD_reactionID:r0094","MetaCyc:R306-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"trioxoheptanoate hydrolase activity","termid":"GO:0018772"}


id: MOD:00595
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an manose group through a glycosidic bond","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosylated residue","termid":"MOD:00434"},{"relation_name":"is_a","term_name":"mannosylated","termid":"MOD:00727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"mannosylated residue","synonyms":[{"name":"ManRes","type":"exact"}],"termid":"MOD:00595"}


id: PBO:0011145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS/CORVET complex subunit, vacuolar sorting protein Vps33","termid":"PBO:0011145"}


id: PBO:0012270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit beta 7 (predicted)","termid":"PBO:0012270"}


id: PR:O94685
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A RalBP1-associated Eps domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain-containing protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.01","secondary_identifiers":["UniProtKB:O94685"],"synonyms":[{"name":"Spom972h-REPS1","type":"exact"}],"termid":"PR:O94685"}


id: MOD:00652
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl group with a palmitoyloxy group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palmitoylated residue","termid":"MOD:00440"},{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"O-palmitoylated residue","synonyms":[{"name":"O-hexadecanoylated residue","type":"exact"},{"name":"OPamRes","type":"exact"}],"termid":"MOD:00652"}


id: GO:0043085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of an enzyme.","definition_xrefs":["GOC:tb","GOC:jl","GOC:vw","GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of molecular function","termid":"GO:0044093"},{"relation_name":"is_a","term_name":"regulation of catalytic activity","termid":"GO:0050790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of catalytic activity","secondary_identifiers":["GO:0048554"],"synonyms":[{"name":"activation of enzyme activity","type":"narrow"},{"name":"activation of metalloenzyme activity","type":"narrow"},{"name":"positive regulation of enzyme activity","type":"exact"},{"name":"positive regulation of metalloenzyme activity","type":"narrow"},{"name":"stimulation of enzyme activity","type":"narrow"},{"name":"stimulation of metalloenzyme activity","type":"narrow"},{"name":"up regulation of enzyme activity","type":"exact"},{"name":"up regulation of metalloenzyme activity","type":"narrow"},{"name":"up-regulation of enzyme activity","type":"exact"},{"name":"up-regulation of metalloenzyme activity","type":"narrow"},{"name":"upregulation of enzyme activity","type":"exact"},{"name":"upregulation of metalloenzyme activity","type":"narrow"}],"termid":"GO:0043085"}


id: PBO:0001036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall protein Ecm33","termid":"PBO:0001036"}


id: PBO:0113133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Formin; polarisome component; nucleates the formation of linear actin filaments, involved in budding and mitotic spindle orientation which require the formation of polarized actin cables; recruited to the division site in a Glc7p/Ref2p dependent manner following release of Bnr1p; spatially focuses Bni1p at mating projection tips, and with Bud6p organizes Bni1p into clusters that nucleate actin assembly during mating projection formation; some functional redundancy with BNR1","termid":"PBO:0113133"}


id: GO:0046363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ribitol, a pentitol derived formally by reduction of the -CHO group of either D- or L-ribose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribitol metabolic process","termid":"GO:0019349"},{"relation_name":"is_a","term_name":"pentitol catabolic process","termid":"GO:0019527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ribitol catabolic process","synonyms":[{"name":"ribitol breakdown","type":"exact"},{"name":"ribitol catabolism","type":"exact"},{"name":"ribitol degradation","type":"exact"}],"termid":"GO:0046363"}


id: PBO:0079037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon AAC) 6-1","termid":"PBO:0079037"}


id: GO:0072005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the identity of a kidney is maintained. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of animal organ identity","termid":"GO:0048496"},{"relation_name":"part_of","term_name":"kidney rudiment formation","termid":"GO:0072003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of kidney identity","synonyms":[{"name":"maintenance of kidney anlage identity","type":"related"}],"termid":"GO:0072005"}


id: MOD:00879
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod","definition_xrefs":["PubMed:2081203","Unimod:457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"naphthalene-2,3-dicarboxaldehyde","synonyms":[{"name":"NDA","type":"related"},{"name":"naphthalene-2,3-dicarboxaldehyde","type":"related"}],"termid":"MOD:00879"}


id: PBO:0066334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCC1 and BTB domain containing protein 2 pseudogene 1","termid":"PBO:0066334"}


id: PBO:0075832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"somatostatin","termid":"PBO:0075832"}


id: PBO:0077024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioesterase superfamily member 6","termid":"PBO:0077024"}


id: PBO:0089363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolase activity, implicated in cellular detoxification","termid":"PBO:0089363"}


id: PBO:0034344
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-only_in_taxon","termid":"PBO:0034344"}


id: PBO:0062336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 75","termid":"PBO:0062336"}


id: GO:1902566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of eosinophil activation.","definition_xrefs":["GOC:TermGenie","PMID:16254138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte activation","termid":"GO:0002694"},{"relation_name":"regulates","term_name":"eosinophil activation","termid":"GO:0043307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of eosinophil activation","termid":"GO:1902566"}


id: MOD:00474
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(1,1,2-(2)H3)-propanamide-L-cysteine.","definition_xrefs":["Unimod:97#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-carboxamidoethyl-L-cysteine","termid":"MOD:00417"},{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-([1,1,2-(2)H3]-carboxamidoethyl)-L-cysteine","synonyms":[{"name":"Acrylamide d3","type":"related"},{"name":"Propionamide:2H(3)","type":"related"},{"name":"S-([1,1,2-(2)H3]-3-amino-3-oxopropyl)cysteine","type":"exact"},{"name":"S-([1,1,2-(2)H3]-carbamoylethyl)-L-cysteine","type":"exact"},{"name":"S-([1,1,2-(2)H3]-propanamide)-L-cysteine","type":"exact"}],"termid":"MOD:00474"}


id: PR:P30597
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- chs1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P30597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.12c","synonyms":[{"name":"Spom972h-chs1","type":"exact"},{"name":"chitin-UDP acetyl-glucosaminyl transferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P30597"}


id: PATO:0002411
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of yellow and brown hue.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brown","termid":"PATO:0000952"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yellow brown","termid":"PATO:0002411"}


id: GO:1904784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a NLRP1 inflammasome complex.","definition_xrefs":["GOC:TermGenie","PMID:19124602","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical inflammasome complex assembly","termid":"GO:0140632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"NLRP1 inflammasome complex assembly","synonyms":[{"name":"NALP1 inflammasome complex assembly","type":"exact"},{"name":"NALP1 inflammasome complex formation","type":"exact"},{"name":"NLRP1 inflammasome complex formation","type":"exact"}],"termid":"GO:1904784"}


id: GO:0102799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + a glucosinolate = alpha-D-glucose + a thiohydroximate-O-sulfate. Glucosinolates are a subclass of thioglucosides.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete glucosinolate glucohydrolase activity (obsolete GO:0102799)","termid":"GO:0102799"}


id: PBO:0061369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 29","termid":"PBO:0061369"}


id: GO:1902940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of intracellular calcium activated chloride channel activity.","definition_xrefs":["GOC:TermGenie","PMID:22946059","GO_REF:0000059","GOC:als"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of intracellular calcium activated chloride channel activity (obsolete GO:1902940)","synonyms":[{"name":"activation of intracellular calcium activated chloride channel activity","type":"narrow"},{"name":"up regulation of intracellular calcium activated chloride channel activity","type":"exact"},{"name":"up-regulation of intracellular calcium activated chloride channel activity","type":"exact"},{"name":"upregulation of intracellular calcium activated chloride channel activity","type":"exact"}],"termid":"GO:1902940"}


id: GO:0072165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the anterior mesonephric tubule over time, from its initial formation to the mature structure. The anterior mesonephric tubule is an epithelial tube that is part of the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric tubule development","termid":"GO:0072164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior mesonephric tubule development","termid":"GO:0072165"}


id: GO:0044832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a virus increases the frequency, rate or extent of cytokine production in its host organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by virus of host cytokine production (obsolete GO:0044832)","synonyms":[{"name":"positive regulation by virus of host cytokine production","type":"exact"}],"termid":"GO:0044832"}


id: PBO:0004641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bystin family U3 and U14 snoRNA associated protein (predicted)","termid":"PBO:0004641"}


id: GO:2000330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T-helper 17 cell lineage commitment.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell fate commitment","termid":"GO:0010455"},{"relation_name":"is_a","term_name":"positive regulation of T-helper 17 cell differentiation","termid":"GO:2000321"},{"relation_name":"is_a","term_name":"regulation of T-helper 17 cell lineage commitment","termid":"GO:2000328"},{"relation_name":"positively_regulates","term_name":"T-helper 17 cell lineage commitment","termid":"GO:0072540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of T-helper 17 cell lineage commitment","synonyms":[{"name":"positive regulation of T-helper 17 cell fate commitment","type":"exact"},{"name":"positive regulation of Th17 cell lineage commitment","type":"exact"},{"name":"positive regulation of Th17 fate commitment","type":"exact"}],"termid":"GO:2000330"}


id: PBO:0035749
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_dimethylation_at_telomere_during_vegetative_growth","termid":"PBO:0035749"}


id: GO:0097634
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the phagophore assembly site membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:mf"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of phagophore assembly site membrane (obsolete GO:0097634)","synonyms":[{"name":"integral to phagophore assembly site membrane","type":"narrow"},{"name":"phagophore assembly site integral membrane protein","type":"related"}],"termid":"GO:0097634"}


id: GO:1902458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of stomatal opening.","definition_xrefs":["GOC:TermGenie","PMID:23766366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of stomatal opening","termid":"GO:1902456"},{"relation_name":"positively_regulates","term_name":"stomatal opening","termid":"GO:1990069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of stomatal opening","synonyms":[{"name":"activation of stomatal opening","type":"narrow"},{"name":"up regulation of stomatal opening","type":"exact"},{"name":"up-regulation of stomatal opening","type":"exact"},{"name":"upregulation of stomatal opening","type":"exact"}],"termid":"GO:1902458"}


id: PBO:0038809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 15","termid":"PBO:0038809"}


id: MONDO:0007312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease","termid":"MONDO:0015626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease with ptosis and parkinsonism","secondary_identifiers":["UMLS:C1861668","OMIM:118301","MESH:C538079","GARD:251","MEDGEN:396191"],"synonyms":[{"name":"Charcot-Marie-Tooth disease with ptosis and parkinsonism","type":"exact"}],"termid":"MONDO:0007312","xrefs":{"Monarch":{"xref_id":"0007312"}}}


id: PR:O43048
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC215.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC domain-containing protein C215.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.01","synonyms":[{"name":"Spom972h-SPBC215.01","type":"exact"}],"termid":"PR:O43048"}


id: GO:0072506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of trivalent inorganic anions within an organism or cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete trivalent inorganic anion homeostasis (obsolete GO:0072506)","termid":"GO:0072506"}


id: GO:0170012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N6-(2E)-butenoyl-L-lysyl-[histone H3 position 18] + NAD+ = 2''-O-(2E)-but-2-enoyl-ADP-D-ribose + L-lysyl-[histone H3] + nicotinamide.","definition_xrefs":["PMID:34927582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD-dependent histone decrotonylase activity","termid":"GO:0160012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016810","GO:0140096","GO:0016787","GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"histone H3K18 decrotonylase activity","termid":"GO:0170012"}


id: PBO:0044145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTBP2 pseudogene 11","termid":"PBO:0044145"}


id: MONDO:0800415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to asthma","termid":"MONDO:0010940"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asthma, aspirin-induced, susceptibility to","secondary_identifiers":["UMLS:C1876174","MEDGEN:362637"],"termid":"MONDO:0800415","xrefs":{"Monarch":{"xref_id":"0800415"}}}


id: PBO:0086041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function involved in ergosterol biosynthesis; conditional mutants produce less ergosterol, display impaired oxygen consumption, respiratory growth, mitochondrial iron utilization, and are more sensitive to oxidative stress; mutant bm-8 has a growth defect on iron-limited medium that is complemented by overexpression of Yfh1p; protein localizes to the cytoplasm, ER and nuclear envelope; highly conserved in ascomycetes","termid":"PBO:0086041"}


id: GO:0090708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the polarity of a plant organ axis is specified.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of axis polarity","termid":"GO:0065001"},{"relation_name":"part_of","term_name":"plant organ morphogenesis","termid":"GO:1905392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of plant organ axis polarity","termid":"GO:0090708"}


id: MONDO:0015405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by vascular malformations that encompasses a spectrum of phenotypic expression involving arteriovenous malformations (AVMs) of the cerebral, orbital, and facial region.","definition_xrefs":["PMID:27787648"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arteriovenous hemangioma/malformation","termid":"MONDO:0001256"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebrofacial arteriovenous metameric syndrome","secondary_identifiers":["MEDGEN:825110","icd11.foundation:1402414905","GARD:12662","SCTID:703266007","UMLS:C3839265","Orphanet:141189"],"synonyms":[{"name":"CAMS","type":"exact"}],"termid":"MONDO:0015405","xrefs":{"Monarch":{"xref_id":"0015405"}}}


id: GO:0021578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the hindbrain to attain its fully functional state. The hindbrain is the region consisting of the medulla, pons and cerebellum. Areas of the hindbrain control motor and autonomic functions.","definition_xrefs":["GOC:dph","GOC:dgh","GO_REF:0000021","ISBN:0838580343","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"central nervous system maturation","termid":"GO:0021626"},{"relation_name":"part_of","term_name":"hindbrain development","termid":"GO:0030902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hindbrain maturation","termid":"GO:0021578"}


id: GO:0061980
data:
  {"annotated_genes":["SJAG_04061","SJAG_02621","SJAG_03042"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88255,111705,117601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035197"}]},"cv_name":"molecular_function","definition":"Binding to a small regulatory RNA, a short RNA (usually 50-200 nt long) that is either independently transcribed or processed from a longer RNA by an RNAse enzyme.","definition_xrefs":["PMID:14622403","PMID:23475961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03042":null,"SJAG_04061":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"regulatory RNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061980","terms_by_termid":{"GO:0035197":null}}


id: MOD:00010
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an L-alanine.","definition_xrefs":["PubMed:6692818","RESID:AA0001","ChEBI:29948","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 71.037114 Da","termid":"MOD:00570"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-alanine residue","synonyms":[{"name":"(2S)-2-aminopropanoic acid","type":"exact"},{"name":"2-aminopropionic acid","type":"exact"},{"name":"2-azanylpropanoic acid","type":"exact"},{"name":"Ala","type":"exact"},{"name":"L-alanine","type":"exact"},{"name":"alpha-alanine","type":"exact"},{"name":"alpha-aminopropionic acid","type":"exact"}],"termid":"MOD:00010"}


id: GO:0002281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in morphology and behavior of a macrophage resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte activation involved in immune response","termid":"GO:0002366"},{"relation_name":"is_a","term_name":"macrophage activation","termid":"GO:0042116"},{"relation_name":"part_of","term_name":"myeloid cell activation involved in immune response","termid":"GO:0002275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macrophage activation involved in immune response","synonyms":[{"name":"macrophage activation during immune response","type":"related"},{"name":"macrophage polarization involved in immune response","type":"exact"}],"termid":"GO:0002281"}


id: FYPO:0003805
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing one or more non-fermentable substance(s) as the only carbon source(s).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002060","FYPO:0002057","FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0002058"],"is_obsolete":false,"name":"decreased cell population growth on non-fermentable carbon source","synonyms":[{"name":"decreased growth on non-fermentable carbon source","type":"broad"},{"name":"decreased vegetative cell growth on non-fermentable carbon source","type":"exact"},{"name":"reduced cell growth on non-fermentable carbon source","type":"exact"},{"name":"slow cell growth on gluconate carbon source","type":"narrow"}],"termid":"FYPO:0003805"}


id: GO:0045852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pH","termid":"GO:0006885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pH elevation","termid":"GO:0045852"}


id: GO:1902473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to synapse.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:22588719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to synapse","termid":"GO:0035418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to synapse","synonyms":[{"name":"regulation of protein localisation to synapse","type":"exact"}],"termid":"GO:1902473"}


id: MONDO:0008589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tremor of intention, ataxia, and lipofuscinosis","secondary_identifiers":["OMIM:190200","MEDGEN:396002","MESH:C566038","UMLS:C1860872"],"synonyms":[{"name":"tremor of intention, ataxia, and lipofuscinosis","type":"exact"}],"termid":"MONDO:0008589","xrefs":{"Monarch":{"xref_id":"0008589"}}}


id: PBO:0029016
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-centromeric_outer_repeat_transcript-derived_siRNA_absent","termid":"PBO:0029016"}


id: MONDO:0011611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature, intellectual disability, callosal agenesis, Heminasal hypoplasia, microphthalmia, and atypical clefting","secondary_identifiers":["MESH:C566989","UMLS:C1970039","MEDGEN:370814","OMIM:605856"],"synonyms":[{"name":"short stature, intellectual disability, callosal agenesis, Heminasal hypoplasia, microphthalmia, and atypical clefting","type":"exact"},{"name":"short stature, mental retardation, callosal agenesis, Heminasal hypoplasia, microphthalmia, and atypical clefting","type":"exact"}],"termid":"MONDO:0011611","xrefs":{"Monarch":{"xref_id":"0011611"}}}


id: PBO:0085065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential subunit of the NuA4 acetyltransferase complex; Esa1p-associated factor; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0085065"}


id: PBO:0003074
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Cyr1","termid":"PBO:0003074"}


id: PBO:0064374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMPCA pseudogene 1","termid":"PBO:0064374"}


id: MONDO:0003467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A synovial sarcoma arising from the mediastinum.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mediastinum sarcoma","termid":"MONDO:0002852"},{"relation_name":"is_a","term_name":"synovial sarcoma","termid":"MONDO:0010434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mediastinum synovial sarcoma","secondary_identifiers":["UMLS:C1334681","MEDGEN:233174","DOID:5488","NCIT:C6618"],"synonyms":[{"name":"mediastinal synovial sarcoma","type":"exact"},{"name":"mediastinum synovial sarcoma (disease)","type":"exact"},{"name":"synovial sarcoma of mediastinum","type":"exact"},{"name":"synovial sarcoma of the mediastinum","type":"exact"}],"termid":"MONDO:0003467","xrefs":{"Monarch":{"xref_id":"0003467"}}}


id: PBO:0081655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 580","termid":"PBO:0081655"}


id: PBO:0090813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GMP synthase [glutamine-hydrolyzing] Gua2","termid":"PBO:0090813"}


id: GO:2000407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T cell extravasation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular extravasation","termid":"GO:0002691"},{"relation_name":"is_a","term_name":"regulation of T cell migration","termid":"GO:2000404"},{"relation_name":"regulates","term_name":"T cell extravasation","termid":"GO:0072683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell extravasation","synonyms":[{"name":"regulation of T lymphocyte extravasation","type":"exact"},{"name":"regulation of T-cell extravasation","type":"exact"},{"name":"regulation of T-lymphocyte extravasation","type":"exact"}],"termid":"GO:2000407"}


id: MONDO:0011575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cerebro-oculo-nasal syndrome is a multisystem malformation syndrome that has been reported in about 10 patients. The clinical features include bilateral anophthalmia, abnormal nares, central nervous system anomalies, and neurodevelopmental delay.","definition_xrefs":["Orphanet:66625"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebrooculonasal syndrome","secondary_identifiers":["GARD:3480","MESH:C565313","MEDGEN:340138","OMIM:605627","SCTID:720855003","UMLS:C1854108"],"synonyms":[{"name":"cerebrooculonasal syndrome","type":"exact"}],"termid":"MONDO:0011575","xrefs":{"Monarch":{"xref_id":"0011575"}}}


id: GO:0031364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an amino group from the side chain of an N-terminal asparagine or glutamine residue of a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid deamination","termid":"GO:0031363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal protein amino acid deamination, from side chain","termid":"GO:0031364"}


id: PR:000044505
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein ypt5 (Schizosaccharomyces pombe) that is prenylated with Geranylgeranyl moieties on the Cys residues within the CxC motif. In addition, the C-terminal Cys is further methylated. Example: UniProtKB:P36586-1, Cys-209/Cys-211, MOD:00113|Cys-211, MOD:00114.","definition_xrefs":["PomBase:MAH","PMID:1597466","PMID:8226998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP-binding protein ypt5 (Schizosaccharomyces pombe)","termid":"PR:000030005"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein ypt5 methylated and prenylated 1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC6F6.15","synonyms":[{"name":"SpYPT5p prenylated","type":"related"}],"termid":"PR:000044505"}


id: GO:1905787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of detection of mechanical stimulus involved in sensory perception of touch.","definition_xrefs":["GOC:TermGenie","PMID:8692859","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"is_a","term_name":"regulation of sensory perception","termid":"GO:0051931"},{"relation_name":"regulates","term_name":"detection of mechanical stimulus involved in sensory perception of touch","termid":"GO:0050976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of detection of mechanical stimulus involved in sensory perception of touch","synonyms":[{"name":"regulation of perception of touch, detection of mechanical stimulus","type":"exact"},{"name":"regulation of perception of touch, sensory detection of mechanical stimulus","type":"exact"},{"name":"regulation of perception of touch, sensory transduction of mechanical stimulus","type":"exact"},{"name":"regulation of sensory detection of mechanical stimulus during perception of touch","type":"exact"},{"name":"regulation of sensory transduction of mechanical stimulus during perception of touch","type":"exact"},{"name":"regulation of tactition, sensory detection of mechanical stimulus","type":"exact"}],"termid":"GO:1905787"}


id: PBO:0074433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 33","termid":"PBO:0074433"}


id: FYECO:0000363
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A sequential growth condition in which cells are first grown at standard temperature, transferred to high, and then back to standard temperature.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two-step temperature shift, standard to high, high to standard","termid":"FYECO:0000363"}


id: GO:1900816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ochratoxin A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ochratoxin A metabolic process","synonyms":[{"name":"Ochratoxin A metabolism","type":"exact"}],"termid":"GO:1900816"}


id: PBO:0059582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTA3 pseudogene 1","termid":"PBO:0059582"}


id: MONDO:0009054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal recessive cutis laxa type 2A","termid":"MONDO:0018163"},{"relation_name":"is_a","term_name":"inherited cutis laxa","termid":"MONDO:0100237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"autosomal recessive cutis laxa type 2, classic type","secondary_identifiers":["SCTID:73856006","Orphanet:357074","UMLS:C5679922","MEDGEN:1825992","DOID:0070141","GARD:17546","MESH:C562632"],"synonyms":[{"name":"ARCL2, Debre type","type":"exact"},{"name":"ARCL2, Debré type","type":"exact"},{"name":"ARCL2, classic type","type":"exact"},{"name":"ARCL2A","type":"related"},{"name":"Arcl2","type":"related"},{"name":"autosomal recessive cutis laxa type 2, Debre type","type":"exact"},{"name":"autosomal recessive cutis laxa type 2, Debré type","type":"exact"},{"name":"autosomal recessive cutis laxa type II classic type","type":"related"}],"termid":"MONDO:0009054","xrefs":{"Monarch":{"xref_id":"0009054"}}}


id: PBO:0091173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps55","termid":"PBO:0091173"}


id: GO:1905509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within an interphase microtubule organizing center.","definition_xrefs":["GOC:TermGenie","GO_REF:0000087","PMID:19001497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule organizing center","termid":"GO:1905508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to interphase microtubule organizing center","synonyms":[{"name":"protein localisation in interphase microtubule organizing center","type":"exact"},{"name":"protein localisation to interphase microtubule organizing center","type":"exact"},{"name":"protein localization in interphase microtubule organizing center","type":"exact"}],"termid":"GO:1905509"}


id: MONDO:0007339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ectodermal dysplasia syndrome characterized by the association of abnormalities of the eyelids, lips, and teeth.","definition_xrefs":["Orphanet:1997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"congenital ectropion","termid":"MONDO:0020161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093","MONDO:0000426"],"is_obsolete":false,"name":"blepharocheilodontic syndrome","secondary_identifiers":["DOID:0080344","icd11.foundation:755252042","GARD:2071","SCTID:717911008","OMIMPS:119580","MESH:C536188","MEDGEN:349302","UMLS:C1861536"],"synonyms":[{"name":"BCD syndrome","type":"exact"},{"name":"BCDS","type":"related"},{"name":"BCDS1","type":"related"},{"name":"Elsching syndrome","type":"exact"},{"name":"Elschnig syndrome","type":"related"},{"name":"blepharo-cheilo-dontic syndrome","type":"related"},{"name":"blepharo-cheilo-odontic syndrome","type":"exact"},{"name":"blepharocheilodontic syndrome","type":"exact"},{"name":"blepharocheilodontic syndrome 1","type":"related"},{"name":"clefting, ectropion, and conical teeth","type":"related"},{"name":"clefting-ectropion-conical teeth syndrome","type":"exact"},{"name":"ectropion inferior cleft lip and or palate","type":"related"},{"name":"ectropion inferior-cleft lip and or palate syndrome","type":"exact"},{"name":"ectropion inferior-cleft lip and/or palate syndrome","type":"exact"},{"name":"ectropion, inferior, with cleft lip and/or palate","type":"related"},{"name":"lagophthalmia with bilateral cleft lip and palate","type":"related"},{"name":"lagophthalmia-cleft lip and palate syndrome","type":"exact"}],"termid":"MONDO:0007339","xrefs":{"Monarch":{"xref_id":"0007339"}}}


id: PBO:0052840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 2-5, pseudogene","termid":"PBO:0052840"}


id: MONDO:0017759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of neurotransmitter metabolism and transport","termid":"MONDO:0019219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of catecholamine synthesis","secondary_identifiers":["GARD:21351","Orphanet:309830","SCTID:237921002","ICD9:270.8","UMLS:C0342685","icd11.foundation:1382276026","MEDGEN:575179"],"termid":"MONDO:0017759","xrefs":{"Monarch":{"xref_id":"0017759"}}}


id: FYPO:0006044
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form mitotic spindle microtubules that are longer than normal, and the protruding kinetochore microtubules are surrounded by an extension of the nuclear envelope, with the kinetochore-attached end at the distal tip of the protrusion.","definition_xrefs":["PomBase:mah","PMID:27146110"],"direct_ancestors":[{"relation_name":"has_part","term_name":"nuclear envelope protrusion present during mitosis","termid":"FYPO:0003788"},{"relation_name":"is_a","term_name":"long microtubules","termid":"FYPO:0000055"},{"relation_name":"is_a","term_name":"long mitotic spindle","termid":"FYPO:0000733"},{"relation_name":"is_a","term_name":"nuclear envelope protrusion present during mitosis","termid":"FYPO:0003788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0000120","FYPO:0000002","FYPO:0002403","FYPO:0000054","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"long mitotic kinetochore microtubules with kinetochore at tip of nuclear envelope protrusion","synonyms":[{"name":"elongated mitotic kinetochore microtubules with kinetochore at tip of nuclear envelope protrusion","type":"exact"},{"name":"elongated mitotic kinetochore microtubules with kinetochore at tip of nuclear envelope protrusion during M-phase","type":"exact"},{"name":"long mitotic kinetochore microtubules with kinetochore at tip of nuclear envelope deformation","type":"related"},{"name":"long mitotic kinetochore microtubules with kinetochore at tip of nuclear envelope protrusion during mitotic cell cycle","type":"related"},{"name":"long mitotic kinetochore microtubules with kinetochore at tip of nuclear envelope protrusion during vegetative growth","type":"exact"},{"name":"long mitotic spindle microtubules with nuclear envelope protrusion from the kinetochore attached end of the microtubule","type":"exact"},{"name":"nuclear envelope protrusion with long mitotic kinetochore microtubules and kinetochore at tip of nuclear envelope protrusion","type":"exact"}],"termid":"FYPO:0006044"}


id: MOD:00791
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to L-glutamic acid with one (18)O.","definition_xrefs":["PubMed:8382902","Unimod:366#Q"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deamidated L-glutamine","termid":"MOD:00685"},{"relation_name":"is_a","term_name":"1x(18)O labeled deamidated residue","termid":"MOD:00852"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1x(18)O labeled deamidated L-glutamine","synonyms":[{"name":"Deamidated:18O(1)","type":"related"},{"name":"Deamidation in presence of O18","type":"related"}],"termid":"MOD:00791"}


id: GO:0102096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dTDP-6-deoxy-beta-L-mannose + N-acetyl-alpha-D-glucosaminyl-diphospho-trans,octacis-decaprenol = dTDP(3-) + alpha-L-Rhap-(1->3)-alpha-D-GlcpNAc-1-diphospho-trans,octacis-decaprenol + H+.","definition_xrefs":["EC:2.4.1.289","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"decaprenyl-N-acetyl-alpha-D-glucosaminyl-pyrophosphate:dTDP-alpha-L-rhamnose rhamnosyltransferase activity","secondary_identifiers":["RHEA:34487","MetaCyc:RXN-11070"],"termid":"GO:0102096"}


id: PBO:0076570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3K","termid":"PBO:0076570"}


id: MONDO:0004880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disease in which the causes of the disease is a perturbation of the lower digestive tract leading to its dysfunction.","definition_xrefs":["MONDO:patterns/disease_by_dysfunctional_structure"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"bowel dysfunction","secondary_identifiers":["SCTID:235594008","UMLS:C2004461","DOID:9779","MEDGEN:384468","ICD9:564.9"],"synonyms":[{"name":"disease of lower digestive tract","type":"exact"},{"name":"lower digestive tract disease","type":"exact"}],"termid":"MONDO:0004880","xrefs":{"Monarch":{"xref_id":"0004880"}}}


id: PBO:0043363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clathrin light chain A","termid":"PBO:0043363"}


id: GO:0010274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Growth or movement in a sessile organism toward or away from water, as of the roots of a plant.","definition_xrefs":["ISBN:0395825172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropism","termid":"GO:0009606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hydrotropism","secondary_identifiers":["Wikipedia:Hydrotropism"],"termid":"GO:0010274"}


id: MONDO:0958226
data:
  {"annotated_genes":["SJAG_02896"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86589],"is_not":false,"summary":null,"term":"MONDO:0958226"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02896":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukoencephalopathy, porphyria-related","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620711"],"termid":"MONDO:0958226","terms_by_termid":{"MONDO:0958226":null},"xrefs":{"Monarch":{"xref_id":"0958226"}}}


id: PBO:0047488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferredoxin-fold anticodon binding domain containing 1","termid":"PBO:0047488"}


id: MONDO:0009087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness, neural, congenital moderate","secondary_identifiers":["OMIM:221500","UMLS:C1857337","MESH:C565640","MEDGEN:347425"],"synonyms":[{"name":"deafness, neural, congenital moderate","type":"exact"}],"termid":"MONDO:0009087","xrefs":{"Monarch":{"xref_id":"0009087"}}}


id: PBO:0069294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 550, pseudogene","termid":"PBO:0069294"}


id: PBO:0112850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asynchronous replication autosomal RNA 9-3","termid":"PBO:0112850"}


id: PATO:0001042
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001042 absolute amplitude (obsolete PATO:0001042)","termid":"PATO:0001042"}


id: PBO:0084287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein that acts as a membrane anchor for Ste50p; involved in the signaling branch of the high-osmolarity glycerol (HOG) pathway and as a regulator of the filamentous growth pathway; overproduction blocks cell cycle arrest in the presence of mating pheromone; relocalizes from vacuole to plasma membrane upon DNA replication stress","termid":"PBO:0084287"}


id: PBO:0034046
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_similarity_relationship_with","termid":"PBO:0034046"}


id: PBO:0001238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FHA domain protein Tos4 (predicted)","termid":"PBO:0001238"}


id: PBO:0086339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pseudogenic fragment with similarity to flocculins; YAR064W has a paralog, YHR213W-B, that arose from a segmental duplication","termid":"PBO:0086339"}


id: MONDO:0001659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0001659 (obsolete MONDO:0001659)","termid":"MONDO:0001659","xrefs":{"Monarch":{"xref_id":"0001659"}}}


id: PBO:0031271
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_condensation","termid":"PBO:0031271"}


id: MONDO:0012963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any microvascular complications of diabetes, susceptibility in which the cause of the disease is a mutation in the ACE gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microvascular complications of diabetes, susceptibility","termid":"MONDO:0000065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microvascular complications of diabetes, susceptibility to, 3","secondary_identifiers":["OMIM:612624","UMLS:C2675470","MEDGEN:390806"],"synonyms":[{"name":"ACE microvascular complications of diabetes, susceptibility","type":"exact"},{"name":"MVCD3","type":"related"},{"name":"end-stage renal disease, diabetic, susceptibility to","type":"related"},{"name":"microvascular complications of diabetes 3","type":"exact"},{"name":"microvascular complications of diabetes, susceptibility caused by mutation in ACE","type":"exact"},{"name":"microvascular complications of diabetes, susceptibility to, 3","type":"exact"},{"name":"microvascular complications of diabetes, susceptibility to, type 3","type":"exact"},{"name":"nephropathy, diabetic, susceptibility to","type":"related"}],"termid":"MONDO:0012963","xrefs":{"Monarch":{"xref_id":"0012963"}}}


id: PBO:0027058
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_wall_polysaccharide_level","termid":"PBO:0027058"}


id: GO:0016655
data:
  {"annotated_genes":["SJAG_01539","SJAG_03476","SJAG_04152","SJAG_02697"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003955"},{"annotations":[112351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008137"},{"annotations":[112352,96210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050136"},{"annotations":[114199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003960"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a quinone or a similar acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01539":null,"SJAG_02697":null,"SJAG_03476":null,"SJAG_04152":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.6.5.-"],"synonyms":[{"name":"oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor","type":"related"}],"termid":"GO:0016655","terms_by_termid":{"GO:0003955":null,"GO:0003960":null,"GO:0008137":null,"GO:0050136":null}}


id: RO:0003308
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between an entity and a condition (phenotype or disease) with which it exhibits a statistical dependence relationship.","direct_ancestors":[{"relation_name":"is_a","term_name":"correlated_with","termid":"RO:0002610"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"correlated_with_condition","termid":"RO:0003308"}


id: GO:0050312
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-sulfoacetaldehyde + H2O = acetate + sulfite.","definition_xrefs":["MetaCyc:SULFOACETALDEHYDE-LYASE-RXN","EC:4.4.1.12"],"gene_count":0,"genotype_count":0,"name":"obsolete sulfoacetaldehyde lyase activity (obsolete GO:0050312)","synonyms":[{"name":"sulphoacetaldehyde lyase activity","type":"exact"}],"termid":"GO:0050312"}


id: PBO:0089699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Use1","termid":"PBO:0089699"}


id: GO:0103064
data:
  {"annotated_genes":["SJAG_03953"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95218],"is_not":false,"summary":null,"term":"GO:0103064"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1D-myo-inositol-1-phospho-N-[(R)-2-hydroxy-very-long-chain fatty acyl]-(R)-4-hydroxysphingoid base + GDP-alpha-D-mannose = an alpha-D-mannosyl-(1,6)-1D-myo-inositol-1-phospho-N-[(R)-2-hydroxy-very-long-chain fatty acyl]-(R)-4-hydroxysphingoid base + GDP + H+.","definition_xrefs":["GOC:pz","RHEA:64596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase activity","termid":"GO:0000030"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"inositol phosphorylceramide mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN3O-663","EC:2.4.1.370"],"termid":"GO:0103064","terms_by_termid":{"GO:0103064":null}}


id: PR:O60065
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxisomal membrane protein PEX14 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23058:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal membrane protein pex14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.03c","secondary_identifiers":["UniProtKB:O60065"],"synonyms":[{"name":"SPBC13G1.03c","type":"related"},{"name":"Spom972h-PEX14","type":"exact"},{"name":"peroxin-14 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60065"}


id: MONDO:0017708
data:
  {"annotated_genes":["SJAG_01474","SJAG_04865"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86237,86238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009849"},{"annotations":[84560,84561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012481"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"hereditary periodic fever syndrome","termid":"MONDO:0017953"},{"relation_name":"is_a","term_name":"sterol biosynthesis disorder","termid":"MONDO:0019240"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01474":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"mevalonate kinase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:772056052","NORD:1260","MESH:D054078","UMLS:C0342731","MedDRA:10072221","NANDO:2200436","Orphanet:309025","GARD:21315","MEDGEN:87453"],"termid":"MONDO:0017708","terms_by_termid":{"MONDO:0009849":null,"MONDO:0012481":null},"xrefs":{"Monarch":{"xref_id":"0017708"}}}


id: GO:0070654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of a sensory epithelium following its loss or destruction.","definition_xrefs":["PMID:19381250","GOC:dsf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelium regeneration","termid":"GO:1990399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory epithelium regeneration","termid":"GO:0070654"}


id: PBO:0031125
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_viability_in_stationary_phase","termid":"PBO:0031125"}


id: GO:1900811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of helvolic acid.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid catabolic process","termid":"GO:0006706"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"},{"relation_name":"is_a","term_name":"helvolic acid metabolic process","termid":"GO:1900810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281","GO:0044248","GO:0006629"],"is_obsolete":false,"name":"helvolic acid catabolic process","synonyms":[{"name":"Fumigacin breakdown","type":"related"},{"name":"Fumigacin catabolic process","type":"related"},{"name":"Fumigacin catabolism","type":"related"},{"name":"Fumigacin degradation","type":"related"},{"name":"helvolic acid breakdown","type":"exact"},{"name":"helvolic acid catabolism","type":"exact"},{"name":"helvolic acid degradation","type":"exact"}],"termid":"GO:1900811"}


id: PBO:0079642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q2 pseudogene 13","termid":"PBO:0079642"}


id: PBO:0046700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS2 pseudogene 1","termid":"PBO:0046700"}


id: MONDO:0008763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A multisystemic disorder characterized by cone-rod dystrophy, hearing loss, obesity, insulin resistance and hyperinsulinemia, type 2 diabetes mellitus, dilated cardiomyopathy (DCM), and progressive hepatic and renal dysfunction.","definition_xrefs":["Orphanet:64"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"excluded_subClassOf","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"excluded_subClassOf","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome associated with dilated cardiomyopathy (obsolete MONDO:0016337)","termid":"MONDO:0016337"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic retinitis pigmentosa (obsolete MONDO:0020240)","termid":"MONDO:0020240"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Alstrom syndrome","secondary_identifiers":["OMIM:203800","SCTID:63702009","MEDGEN:78675","MESH:D056769","ICD9:759.89","DOID:0050473","NORD:757","UMLS:C0268425","MedDRA:10068783","NCIT:C84549","GARD:5787"],"synonyms":[{"name":"ALMS","type":"exact"},{"name":"ALSS","type":"exact"},{"name":"Alstrom syndrome","type":"exact"},{"name":"Alstrom's syndrome","type":"exact"},{"name":"Alström Syndrome","type":"exact"},{"name":"Alström syndrome","type":"exact"}],"termid":"MONDO:0008763","xrefs":{"Monarch":{"xref_id":"0008763"}}}


id: GO:1902596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication origin binding.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:11850415"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA binding","termid":"GO:0043392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA replication origin binding","synonyms":[{"name":"down regulation of ARS binding","type":"narrow"},{"name":"down regulation of DNA replication origin binding","type":"exact"},{"name":"down-regulation of ARS binding","type":"narrow"},{"name":"down-regulation of DNA replication origin binding","type":"exact"},{"name":"downregulation of ARS binding","type":"narrow"},{"name":"downregulation of DNA replication origin binding","type":"exact"},{"name":"inhibition of ARS binding","type":"narrow"},{"name":"inhibition of DNA replication origin binding","type":"narrow"},{"name":"negative regulation of ARS binding","type":"narrow"}],"termid":"GO:1902596"}


id: GO:0034531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxy-4-hydroxymethylbenzalpyruvate + H2O = pyruvate + 4-hydroxymethylsalicylaldehyde.","definition_xrefs":["PMID:8042906"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-4-hydroxymethylbenzalpyruvate hydratase-aldolase activity (obsolete GO:0034531)","termid":"GO:0034531"}


id: GO:0018504
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-1,2-dihydrobenzene-1,2-diol + NAD+ = catechol + NADH + H+.","definition_xrefs":["EC:1.3.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cis-1,2-dihydrobenzene-1,2-diol dehydrogenase activity","secondary_identifiers":["RHEA:15457","MetaCyc:1.3.1.19-RXN","UM-BBD_enzymeID:r0080"],"synonyms":[{"name":"cis-1,2-dihydrobenzene-1,2-diol:NAD+ oxidoreductase activity","type":"related"},{"name":"cis-1,2-dihydrocyclohexa-3,5-diene (nicotinamide adenine dinucleotide) oxidoreductase activity","type":"related"},{"name":"cis-benzene glycol dehydrogenase activity","type":"related"}],"termid":"GO:0018504"}


id: GO:1990858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lectin stimulus. A lectin is a carbohydrate-binding protein, highly specific for binding sugar moieties.","definition_xrefs":["PMID:25996210","PMID:26306444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lectin","termid":"GO:1990840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to lectin","termid":"GO:1990858"}


id: PBO:0005457
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally represses genes involved in transport","termid":"PBO:0005457"}


id: MONDO:0019080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alopecia totalis is a form of alopecia areata, an inflammatory disease of the hair follicle, characterized by a complete loss of hair of the entire scalp which becomes glabrous.","definition_xrefs":["Orphanet:700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alopecia totalis","secondary_identifiers":["SCTID:19754005","UMLS:C0263504","icd11.foundation:1633035058","MedDRA:10001766","ICD9:704.09","GARD:613","MEDGEN:75525"],"synonyms":[{"name":"alopecia totalis","type":"exact"},{"name":"total alopecia areata","type":"related"}],"termid":"MONDO:0019080","xrefs":{"Monarch":{"xref_id":"0019080"}}}


id: PBO:0029479
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_sterol_ester_level","termid":"PBO:0029479"}


id: FYPO:0003185
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the microtubule cytoskeleton is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cytoskeleton during vegetative growth","termid":"FYPO:0003184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to microtubule cytoskeleton during mitotic interphase","synonyms":[{"name":"normal protein localisation to microtubule cytoskeleton during mitotic interphase","type":"exact"},{"name":"normal protein localization to microtubule cytoskeleton during interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0003185"}


id: GO:0015976
data:
  {"annotated_genes":["SJAG_02785"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88689],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0043609"}]},"cv_name":"biological_process","definition":"A series of processes that forms an integrated mechanism by which a cell or an organism detects the depletion of primary carbon sources and then activates genes to scavenge the last traces of the primary carbon source and to transport and metabolize alternative carbon sources such as carbon dioxide or carbonic acid. The utilization process begins when the cell or organism detects carbon levels, includes the activation of genes whose products detect, transport or metabolize carbon-containing substances, and ends when carbon is incorporated into the cell or organism's metabolism.","definition_xrefs":["GOC:mah","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nutrient levels","termid":"GO:0031667"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carbon utilization","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Heterotroph","GO:0015978"],"synonyms":[{"name":"carbon utilization by utilization of organic compounds","type":"exact"},{"name":"heterotrophy","type":"exact"}],"termid":"GO:0015976","terms_by_termid":{"GO:0043609":null}}


id: GO:0021728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the inferior reticular formation over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:cls","GOC:curators","GOC:jid","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"medullary reticular formation development","termid":"GO:0021723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inferior reticular formation development","termid":"GO:0021728"}


id: PBO:0003519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpt2","termid":"PBO:0003519"}


id: GO:0099189
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the spectrin-associated cytoskeleton contained within the postsynapse.","definition_xrefs":["PMID:28576936","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spectrin-associated cytoskeleton","termid":"GO:0014731"},{"relation_name":"is_a","term_name":"postsynaptic cytoskeleton","termid":"GO:0099571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic spectrin-associated cytoskeleton","termid":"GO:0099189"}


id: GO:0101010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reorganization or renovation of existing pulmonary blood vessels.","definition_xrefs":["GOC:mec"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel remodeling","termid":"GO:0001974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pulmonary blood vessel remodeling","synonyms":[{"name":"pulmonary blood vessel remodelling","type":"exact"}],"termid":"GO:0101010"}


id: PBO:0087685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the NuA3 histone acetyltransferase complex; this complex acetylates histone H3; contains PHD finger domain that interacts with methylated histone H3","termid":"PBO:0087685"}


id: GO:0102954
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dalcochinin-8'-O-beta-glucoside + H2O = dalcochinin + D-glucopyranose.","definition_xrefs":["GOC:pz","PMID:16814564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"dalcochinase activity","secondary_identifiers":["MetaCyc:RXN-9162"],"termid":"GO:0102954"}


id: PR:O74743
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tif452 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.18","synonyms":[{"name":"Spom972h-tif452","type":"exact"},{"name":"eIF-4E-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF-4F 25 kDa subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF4E-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mRNA cap-binding protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74743"}


id: GO:0015119
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of hexose phosphate from one side of a membrane to the other. Hexose phosphates is any of a group of monophosphorylated aldoses with a chain of six carbon atoms in the molecule.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"hexose phosphate transmembrane transporter activity","termid":"GO:0015119"}


id: MONDO:0014690
data:
  {"annotated_genes":["SJAG_01378"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84594],"is_not":false,"summary":null,"term":"MONDO:0014690"}]},"cv_name":"mondo","definition":"A dyskeratosis congenita that has material basis in an autosomal dominant mutation of ACD on chromosome 16q22.1.","definition_xrefs":["DOID:0070023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hematologic disorder","termid":"MONDO:0005570"},{"relation_name":"is_a","term_name":"dyskeratosis congenita","termid":"MONDO:0015780"},{"relation_name":"is_a","term_name":"ACD-related short telomere syndrome","termid":"MONDO:0100569"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01378":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0005093","MONDO:0000426","MONDO:0005570"],"is_obsolete":false,"name":"dyskeratosis congenita, autosomal dominant 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16136","NCIT:C176924","UMLS:C4225284","OMIM:616553","MEDGEN:904824"],"synonyms":[{"name":"DKCA6","type":"exact"},{"name":"autosomal dominant dyskeratosis congenita 6","type":"related"},{"name":"dyskeratosis congenita, autosomal dominant 6","type":"exact"},{"name":"dyskeratosis congenita, autosomal dominant type 6","type":"exact"},{"name":"dyskeratosis congenita, autosomal recessive 7","type":"related"}],"termid":"MONDO:0014690","terms_by_termid":{"MONDO:0014690":null},"xrefs":{"Monarch":{"xref_id":"0014690"}}}


id: PBO:0003504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S17 (predicted)","termid":"PBO:0003504"}


id: PBO:0017411
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-agent_in","termid":"PBO:0017411"}


id: PBO:0082141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Activator of Chs3p (chitin synthase III) during vegetative growth; recruits Chs3p to the bud neck via interaction with Bni4p; SKT5 has a paralog, SHC1, that arose from the whole genome duplication","termid":"PBO:0082141"}


id: SO:0001317
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Queuosine is a modified 7-deazoguanosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"seven_deazaguanosine","termid":"SO:0001316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuosine","secondary_identifiers":["RNAMOD:043","http://en.wikipedia.org/wiki/Queuosine"],"synonyms":[{"name":" Q","type":"exact"}],"termid":"SO:0001317"}


id: PBO:0000358
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.4.2.3","termid":"PBO:0000358"}


id: GO:0016299
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Inhibits signal transduction the GTPase activity of G-protein alpha subunits, thereby driving them into their inactive GDP-bound form.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulator of G-protein signaling activity (obsolete GO:0016299)","synonyms":[{"name":"RGS","type":"exact"},{"name":"regulator of G protein signaling activity","type":"exact"},{"name":"regulator of G protein signalling activity","type":"exact"},{"name":"regulator of G-protein signaling activity","type":"exact"},{"name":"regulator of G-protein signalling activity","type":"exact"}],"termid":"GO:0016299"}


id: PBO:0087229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Securin; inhibits anaphase by binding separin Esp1p; blocks cyclin destruction and mitotic exit, essential for meiotic progression and mitotic cell cycle arrest; localization is cell-cycle dependent and regulated by Cdc28p phosphorylation","termid":"PBO:0087229"}


id: GO:0010148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Release of water by the plant into the air as water vapor mainly through leaves.","definition_xrefs":["ISBN:0879015322","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water transport","termid":"GO:0006833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"transpiration","secondary_identifiers":["Wikipedia:Transpiration"],"termid":"GO:0010148"}


id: PBO:0006188
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_downstream_target","termid":"PBO:0006188"}


id: GO:0005911
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell junction that forms a connection between two or more cells of an organism; excludes direct cytoplasmic intercellular bridges, such as ring canals in insects.","definition_xrefs":["GOC:bc","GOC:hb","GOC:mah","GOC:dgh","GOC:aruk","PMID:21422226","PMID:28096264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anchoring junction","termid":"GO:0070161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell-cell junction","secondary_identifiers":["NIF_Subcellular:sao1922892319"],"synonyms":[{"name":"cell-cell contact region","type":"broad"},{"name":"cell-cell contact zone","type":"broad"},{"name":"intercellular junction","type":"exact"}],"termid":"GO:0005911"}


id: MONDO:0011314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Graves disease","termid":"MONDO:0005364"},{"relation_name":"is_a","term_name":"autoimmune thyroid disease, susceptibility to","termid":"MONDO:0000162"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Graves disease, susceptibility to, 2","secondary_identifiers":["OMIM:603388","MEDGEN:350301","UMLS:C1863923"],"synonyms":[{"name":"Graves disease, susceptibility to, 2","type":"exact"},{"name":"Graves disease, susceptibility to, type 2","type":"exact"},{"name":"Grd2","type":"related"}],"termid":"MONDO:0011314","xrefs":{"Monarch":{"xref_id":"0011314"}}}


id: MONDO:0001459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease involving the radial nerve. Clinical features include weakness of elbow extension, elbow flexion, supination of the forearm, wrist and finger extension, and thumb abduction. Sensation may be impaired over regions of the dorsal forearm. Common sites of compression or traumatic injury include the axilla and radial groove of the humerus.","definition_xrefs":["MESH:D020425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononeuropathy","termid":"MONDO:0001397"},{"relation_name":"is_a","term_name":"brachial plexus neuropathy","termid":"MONDO:0006683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"radial neuropathy","secondary_identifiers":["MEDGEN:148185","UMLS:C0748226","SCTID:16644004","DOID:12171"],"synonyms":[{"name":"peripheral neuropathy of radial nerve","type":"exact"},{"name":"radial nerve peripheral neuropathy","type":"exact"}],"termid":"MONDO:0001459","xrefs":{"Monarch":{"xref_id":"0001459"}}}


id: MONDO:0018771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A congenital heart malformation that involves the interventricular septum.","definition_xrefs":["MONDO:patterns/location"],"gene_count":0,"genotype_count":0,"name":"obsolete congenital anomaly of ventricular septum (obsolete MONDO:0018771)","secondary_identifiers":["Orphanet:474347"],"synonyms":[{"name":"congenital anomaly of interventricular communication","type":"exact"},{"name":"congenital heart malformation of interventricular septum","type":"exact"},{"name":"congenital ventricular septal anomaly","type":"exact"},{"name":"interventricular septum congenital heart malformation","type":"exact"},{"name":"rare congenital anomaly of ventricular septum","type":"related"}],"termid":"MONDO:0018771","xrefs":{"Monarch":{"xref_id":"0018771"}}}


id: GO:1905521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of macrophage migration.","definition_xrefs":["GOC:TermGenie","PMID:25749876","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mononuclear cell migration","termid":"GO:0071675"},{"relation_name":"regulates","term_name":"macrophage migration","termid":"GO:1905517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of macrophage migration","termid":"GO:1905521"}


id: PBO:0075989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stanniocalcin 1","termid":"PBO:0075989"}


id: GO:2001286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of caveolin-mediated endocytosis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocytosis","termid":"GO:0030100"},{"relation_name":"regulates","term_name":"caveolin-mediated endocytosis","termid":"GO:0072584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of caveolin-mediated endocytosis","synonyms":[{"name":"regulation of caveolae-dependent endocytosis","type":"exact"},{"name":"regulation of caveolae-mediated endocytosis","type":"exact"},{"name":"regulation of caveolin-dependent endocytosis","type":"exact"}],"termid":"GO:2001286"}


id: PBO:0064029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 63","termid":"PBO:0064029"}


id: MONDO:0009408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperuricemia, infantile, with abnormal behavior and normal hypoxanthine guanine phosphoribosyltransferase","secondary_identifiers":["MESH:C565489","OMIM:240000","UMLS:C1855884","MEDGEN:383794"],"synonyms":[{"name":"hyperuricemia, infantile, with abnormal behavior and normal hypoxanthine guanine phosphoribosyltransferase","type":"exact"}],"termid":"MONDO:0009408","xrefs":{"Monarch":{"xref_id":"0009408"}}}


id: PBO:0044970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase E1 and transketolase domain containing 1","termid":"PBO:0044970"}


id: GO:0051704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A biological process which involves another organism of the same or different species.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism process (obsolete GO:0051704)","synonyms":[{"name":"interaction between organisms","type":"exact"},{"name":"physiological interaction between organisms","type":"exact"},{"name":"physiological interaction with other organism","type":"exact"}],"termid":"GO:0051704"}


id: PBO:0091719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ATP-dependent RNA helicase Mss116","termid":"PBO:0091719"}


id: PBO:0056303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 2","termid":"PBO:0056303"}


id: MONDO:0008053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 2, autosomal dominant","secondary_identifiers":["MEDGEN:331770","OMIM:160700","UMLS:C1834531","MESH:C563541"],"synonyms":[{"name":"MYP2","type":"exact"},{"name":"myopia 2, autosomal dominant","type":"exact"}],"termid":"MONDO:0008053","xrefs":{"Monarch":{"xref_id":"0008053"}}}


id: PBO:0038909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor E4, pseudogene","termid":"PBO:0038909"}


id: GO:0097414
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cytoplasmic inclusion, 5 to 15 micrometers in diameter, with a dense core surrounded by a halo of 10 to 20 nm wide radially oriented alpha-synuclein fibrils.","definition_xrefs":["NIF_Subcellular:sao4749542545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Lewy body","termid":"GO:0097413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"classical Lewy body","synonyms":[{"name":"brainstem Lewy body","type":"related"}],"termid":"GO:0097414"}


id: GO:0042868
data:
  {"annotated_genes":["SJAG_00266","SJAG_01717","SJAG_03745","SJAG_03047","SJAG_01176","SJAG_03680","SJAG_02621","SJAG_04574"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107459],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0060195"},{"annotations":[113482,91731,117590,101911,87848,105758,109976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071040"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving antisense RNA, an RNA molecule complementary in sequence to another RNA or DNA molecule, which, by binding the latter, acts to inhibit its function and/or completion of synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_01176":null,"SJAG_01717":null,"SJAG_02621":null,"SJAG_03047":null,"SJAG_03680":null,"SJAG_03745":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antisense RNA metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"antisense RNA metabolism","type":"exact"}],"termid":"GO:0042868","terms_by_termid":{"GO:0060195":null,"GO:0071040":null}}


id: PR:O74342
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1A4.11c gene.","definition_xrefs":["UniProtKB:O74342","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1A4.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1A4.11c","synonyms":[{"name":"Spom972h-SPBC1A4.11c","type":"exact"}],"termid":"PR:O74342"}


id: PBO:0054291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1682","termid":"PBO:0054291"}


id: GO:0062192
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-L-rhamnose = beta-L-rhamnose.","definition_xrefs":["RHEA:25584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"L-rhamnose mutarotase activity","secondary_identifiers":["EC:5.1.3.32"],"termid":"GO:0062192"}


id: GO:0102901
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + isopimaradienol + NADPH + O2 = isopimaradiene-diol + NADP + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete isopimaradienol hydroxylase activity (obsolete GO:0102901)","termid":"GO:0102901"}


id: GO:0034103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of tissue remodeling.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"tissue remodeling","termid":"GO:0048771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tissue remodeling","synonyms":[{"name":"regulation of tissue remodelling","type":"exact"}],"termid":"GO:0034103"}


id: FYPO:0005267
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to aluminium ions. Cells stop growing (and may die) at a concentration of aluminium ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002683","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to aluminium","synonyms":[{"name":"hypersensitive to aluminium","type":"exact"},{"name":"sensitive to aluminium during mitotic cell cycle","type":"related"},{"name":"sensitive to aluminium during vegetative growth","type":"exact"},{"name":"sensitive to aluminium ions","type":"exact"},{"name":"sensitive to aluminum","type":"exact"}],"termid":"FYPO:0005267"}


id: FYPO:0003644
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell is too low to detect during a cellular response to thiamine starvation. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to thiamine starvation","termid":"FYPO:0001244"},{"relation_name":"is_a","term_name":"RNA absent from cell during vegetative growth","termid":"FYPO:0003161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"RNA absent from cell during cellular response to thiamine starvation","synonyms":[{"name":"RNA absent from cell during cellular response to thiamine starvation during mitotic cell cycle","type":"related"},{"name":"RNA absent from cell during cellular response to thiamine starvation during vegetative growth","type":"exact"},{"name":"RNA absent from cell during cellular response to vitamin B1 starvation","type":"exact"},{"name":"transcripts absent from cell during cellular response to thiamine starvation","type":"exact"},{"name":"undetectable RNA level during cellular response to thiamine starvation","type":"exact"}],"termid":"FYPO:0003644"}


id: GO:0031254
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The area of a motile cell opposite to the direction of movement.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell trailing edge","synonyms":[{"name":"back of cell","type":"exact"},{"name":"trailing edge","type":"exact"}],"termid":"GO:0031254"}


id: PBO:0071639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 3","termid":"PBO:0071639"}


id: GO:0019090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a rRNA, ribosomal ribonucleic acid, is transported from the mitochondrial matrix into the cytosol.","definition_xrefs":["GOC:ai","PMID:28115039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA transport","termid":"GO:0051029"},{"relation_name":"is_a","term_name":"export from the mitochondrion","termid":"GO:0170037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"mitochondrial rRNA export from mitochondrion","synonyms":[{"name":"export of mitochondrial rRNA","type":"broad"},{"name":"mitochondrial rRNA export","type":"exact"},{"name":"mitochondrial rRNA export from mitochondria","type":"exact"},{"name":"mitochondrial rRNA export out of mitochondrion","type":"exact"},{"name":"mitochondrial rRNA transport from mitochondrion","type":"exact"},{"name":"mitochondrial rRNA, mitochondrial export","type":"exact"}],"termid":"GO:0019090"}


id: GO:0034174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to the endolysosomal toll-like receptor 12.","definition_xrefs":["PMID:16551253","GOC:add","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endolysosomal toll-like receptor signaling pathway","termid":"GO:0140894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"toll-like receptor 12 signaling pathway","synonyms":[{"name":"TLR12 signaling pathway","type":"exact"},{"name":"toll-like receptor 12 signalling pathway","type":"exact"}],"termid":"GO:0034174"}


id: GO:0018043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-isoleucine amide by hydrolysis and oxidation of an interior Ile-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0090"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-isoleucine amidation (obsolete GO:0018043)","termid":"GO:0018043"}


id: PBO:0003407
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Extender of the Chronological Lifespan","termid":"PBO:0003407"}


id: GO:0061753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The localization process by which an autophagic substrate is delivered to a forming autophagosome.","definition_xrefs":["GOC:dph","GOC:pad","GOC:PARL","PMID:23545414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"part_of","term_name":"autophagosome assembly","termid":"GO:0000045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0044085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"substrate localization to autophagosome","synonyms":[{"name":"substrate sequestration to autophagosome","type":"exact"},{"name":"substrate sequestration to phagophore","type":"exact"}],"termid":"GO:0061753"}


id: GO:0008124
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7,8-tetrahydro-4a-hydroxypterin = (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7,8-dihydro-6H-pterin + H2O.","definition_xrefs":["RHEA:11920","EC:4.2.1.96"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"4-alpha-hydroxytetrahydrobiopterin dehydratase activity","secondary_identifiers":["KEGG_REACTION:R04734","MetaCyc:RXN-7908","Reactome:R-HSA-71146"],"synonyms":[{"name":"(6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7,8-tetrahydro-4a-hydroxypterin hydro-lyase [(6R)-6-(L-erythro-1,2-dihydroxypropyl)-7,8-dihydro-6H-pterin-forming]","type":"related"},{"name":"4-alpha-hydroxy-tetrahydropterin dehydratase activity","type":"related"},{"name":"4a-hydroxytetrahydrobiopterin dehydratase activity","type":"exact"},{"name":"4a-hydroxytetrahydrobiopterin hydro-lyase activity","type":"related"},{"name":"4alpha-hydroxy-tetrahydropterin dehydratase activity","type":"related"},{"name":"pterin-4-alpha-carbinolamine dehydratase activity","type":"exact"},{"name":"pterin-4a-carbinolamine dehydratase activity","type":"exact"},{"name":"pterin-4alpha-carbinolamine dehydratase activity","type":"related"},{"name":"tetrahydrobiopterin dehydratase activity","type":"related"}],"termid":"GO:0008124"}


id: PBO:0058755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6879","termid":"PBO:0058755"}


id: PBO:0089320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin-protein ligase E3, implicated in negative regulation of ubiquitinated chromatin formation","termid":"PBO:0089320"}


id: PBO:0057245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 449b","termid":"PBO:0057245"}


id: PBO:0076859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 9","termid":"PBO:0076859"}


id: PBO:0046379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosomal transmembrane epsin interactor 3","termid":"PBO:0046379"}


id: GO:0070656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Differentiation of new mechanoreceptors to replace those lost or destroyed by injury.","definition_xrefs":["PMID:19381250","GOC:dsf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mechanoreceptor differentiation","termid":"GO:0042490"},{"relation_name":"part_of","term_name":"mechanosensory epithelium regeneration","termid":"GO:0070655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mechanoreceptor differentiation involved in mechanosensory epithelium regeneration","termid":"GO:0070656"}


id: GO:0044568
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large, multimeric protein complex which catalyzes the biosynthesis of cellulose for the plant secondary cell wall. In Arabidopsis, contains the essential component proteins CESA8, CESA7, and CESA4.","definition_xrefs":["GOC:mengo_curators","PMID:21307367","GOC:tt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellulose synthase complex","termid":"GO:0010330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"secondary cell wall cellulose synthase complex","synonyms":[{"name":"secondary cell wall CESA complex","type":"exact"},{"name":"secondary cell-wall cellulose synthase complex","type":"exact"}],"termid":"GO:0044568"}


id: GO:0070472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of uterine smooth muscle contraction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle contraction","termid":"GO:0006940"},{"relation_name":"regulates","term_name":"uterine smooth muscle contraction","termid":"GO:0070471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of uterine smooth muscle contraction","synonyms":[{"name":"regulation of myometrial contraction","type":"exact"},{"name":"regulation of myometrial smooth muscle contraction","type":"exact"},{"name":"regulation of myometrium contraction","type":"exact"}],"termid":"GO:0070472"}


id: PBO:0084231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hydrophilin essential in desiccation-rehydration process; cell wall protein; contains a putative GPI-attachment site","termid":"PBO:0084231"}


id: GO:0034926
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pyrene-4,5-oxide + H2O = trans-4,5-dihydroxy-4,5-dihydropyrene.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pyrene-4,5-epoxide hydrolase activity (obsolete GO:0034926)","termid":"GO:0034926"}


id: MONDO:0005928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition characterized by a chronically swollen limb, often a leg with stasis dermatitis and ulcerations. This syndrome can appear soon after phlebitis or years later. Postphlebitic syndrome is the result of damaged or incompetent venous valves in the limbs. Distended, tortuous varicose veins are usually present. Leg pain may occur after long period of standing.","definition_xrefs":["MESH:D011186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venous insufficiency","termid":"MONDO:0000945"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-thrombotic syndrome","secondary_identifiers":["ICD9:459.13","ICD9:459.12","EFO:0007452","ICD10CM:I87.0","ICD9:459.1","MEDGEN:46043","DOID:2364","ICD9:459.10","SCTID:20427003","UMLS:C0032807","ICD9:459.11"],"synonyms":[{"name":"postphlebetic syndrome with inflammation","type":"exact"},{"name":"postphlebetic syndrome with ulcer","type":"exact"},{"name":"postphlebetic syndrome with ulcer and inflammation","type":"exact"},{"name":"postphlebitic syndrome","type":"exact"},{"name":"venous stress disorder","type":"exact"}],"termid":"MONDO:0005928","xrefs":{"Monarch":{"xref_id":"0005928"}}}


id: PBO:0066181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBM5 antisense RNA 1","termid":"PBO:0066181"}


id: PBO:0065239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 13 pseudogene 7","termid":"PBO:0065239"}


id: PBO:0052074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin regulatory subunit B1","termid":"PBO:0052074"}


id: MONDO:0016290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome is characterized by major seizures, dysmorphic features (round face, bulbous nose, wide mouth, prominent philtrum), pes planus, psychomotor retardation and obesity. It has been described in five children (three boys and two girls, one of whom died in infancy) from two unrelated Mexican families. This condition is likely to be transmitted as an autosomal recessive trait.","definition_xrefs":["Orphanet:2139"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hernández-Aguirre Negrete syndrome","secondary_identifiers":["SCTID:721146009","GARD:3491","MEDGEN:419481","UMLS:C2931736","MESH:C538112"],"synonyms":[{"name":"Ehlers-Danlos syndrome with progeroid facies and mild intellectual disability","type":"related"},{"name":"Ehlers-Danlos syndrome with progeroid facies and mild mental retardation","type":"related"},{"name":"intellectual disability-epilepsy-bulbous nose syndrome","type":"exact"}],"termid":"MONDO:0016290","xrefs":{"Monarch":{"xref_id":"0016290"}}}


id: PBO:0078955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transformation/transcription domain associated protein","termid":"PBO:0078955"}


id: MONDO:0001549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute kidney injury associated with microangiopathic hemolytic anemia and thrombocytopenia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hemolytic anemia","termid":"MONDO:0003664"},{"relation_name":"excluded_subClassOf","term_name":"obsolete rare constitutional hemolytic anemia (obsolete MONDO:0015910)","termid":"MONDO:0015910"},{"relation_name":"excluded_subClassOf","term_name":"thrombotic microangiopathy","termid":"MONDO:0019737"},{"relation_name":"is_a","term_name":"blood coagulation disease","termid":"MONDO:0001531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hemolytic-uremic syndrome","secondary_identifiers":["MESH:D006463","MEDGEN:42403","SCTID:111407006","UMLS:C0019061","NCIT:C75545","Orphanet:544458","DOID:12554","GARD:22233","ICD10CM:D59.3","ICD9:283.11"],"synonyms":[{"name":"HUS","type":"exact"},{"name":"acute renal failure, thrombocytopenia, and microangiopathic hemolytic anaemia associated with distorted erythrocytes ('burr cells')","type":"related"},{"name":"acute renal failure, thrombocytopenia, and microangiopathic hemolytic anemia associated with distorted erythrocytes ('burr cells')","type":"related"},{"name":"haemolytic-uraemic syndrome","type":"exact"},{"name":"hemolytic uremic syndrome","type":"exact"}],"termid":"MONDO:0001549","xrefs":{"Monarch":{"xref_id":"0001549"}}}


id: PBO:0087492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of DNA polymerase delta (polymerase III); essential for cell viability; involved in DNA replication and DNA repair; forms a complex with Rev3p, Rev7p and Pol32p; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087492"}


id: PBO:0045757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelin converting enzyme like 1 pseudogene 1","termid":"PBO:0045757"}


id: PBO:0068395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 214","termid":"PBO:0068395"}


id: GO:0097503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of sialic acid to a substrate molecule.","definition_xrefs":["GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule modification","termid":"GO:0043412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sialylation","termid":"GO:0097503"}


id: GO:0015355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the movement of a monocarboxylate, any compound containing a single carboxyl group (COOH or COO-), by uniport, symport or antiport across a membrane by a carrier-mediated mechanism.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"secondary active monocarboxylate transmembrane transporter activity","synonyms":[{"name":"monocarboxylate porter activity","type":"related"}],"termid":"GO:0015355"}


id: PBO:0052391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 28, pseudogene","termid":"PBO:0052391"}


id: MONDO:0100066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tyrosine hydroxylase deficiency in which individuals are extremely sensitive to levodopa therapy. In this very severe form, treatment with levodopa is often limited by intolerable dyskinesias.","definition_xrefs":["PMID:20301610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine hydroxylase deficiency","termid":"MONDO:0100064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"TH-deficient progressive infantile encephalopathy","synonyms":[{"name":"tyrosine hydroxylase-deficient progressive infantile encephalopathy","type":"exact"}],"termid":"MONDO:0100066","xrefs":{"Monarch":{"xref_id":"0100066"}}}


id: PBO:0073636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 22, pseudogene","termid":"PBO:0073636"}


id: GO:0061633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glucose into pyruvate, in which the glucose is converted to glucose-6-phosphate intermediate coupled to transmembrane transport.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolytic process through glucose-6-phosphate","termid":"GO:0061620"},{"relation_name":"is_a","term_name":"glucose catabolic process to pyruvate","termid":"GO:0061718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975","GO:0006091","GO:0055086"],"is_obsolete":false,"name":"transport-coupled glycolytic process through glucose-6-phosphate","secondary_identifiers":["MetaCyc:GLYCOLYSIS"],"termid":"GO:0061633"}


id: GO:0070002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism involving a glutamate/glutamine catalytic dyad.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activity","termid":"GO:0008233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0008233","GO:0016787","GO:0140096","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glutamic-type peptidase activity","termid":"GO:0070002"}


id: GO:0004230
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the release of a N-terminal glutamate (and to a lesser extent aspartate) from a peptide.","definition_xrefs":["EC:3.4.11.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminopeptidase activity","termid":"GO:0004177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0008233","GO:0140096","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glutamyl aminopeptidase activity","secondary_identifiers":["MetaCyc:3.4.11.7-RXN"],"synonyms":[{"name":"Ca2+-activated glutamate aminopeptidase activity","type":"related"},{"name":"L-aspartate aminopeptidase activity","type":"related"},{"name":"aminopeptidase A","type":"related"},{"name":"angiotensinase A","type":"related"},{"name":"angiotensinase A2","type":"related"},{"name":"antigen BP-1/6C3 of mouse B lymphocytes","type":"related"},{"name":"aspartate aminopeptidase activity","type":"related"},{"name":"glutamyl peptidase activity","type":"related"},{"name":"membrane aminopeptidase II","type":"related"}],"termid":"GO:0004230"}


id: PBO:0001497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR98","termid":"PBO:0001497"}


id: GO:0010373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of gibberellins.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gibberellin biosynthetic process","termid":"GO:0010371"},{"relation_name":"is_a","term_name":"negative regulation of isoprenoid metabolic process","termid":"GO:0045827"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"gibberellin biosynthetic process","termid":"GO:0009686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of gibberellin biosynthetic process","synonyms":[{"name":"negative regulation of gibberellic acid biosynthetic process","type":"narrow"}],"termid":"GO:0010373"}


id: GO:2000370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of clathrin-mediated endocytosis.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of receptor-mediated endocytosis","termid":"GO:0048260"},{"relation_name":"is_a","term_name":"regulation of clathrin-dependent endocytosis","termid":"GO:2000369"},{"relation_name":"positively_regulates","term_name":"clathrin-dependent endocytosis","termid":"GO:0072583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"positive regulation of clathrin-dependent endocytosis","synonyms":[{"name":"positive regulation of clathrin coated pit-dependent endocytosis","type":"exact"},{"name":"positive regulation of clathrin-mediated endocytosis","type":"exact"}],"termid":"GO:2000370"}


id: PBO:0078411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (CCC) 5-1","termid":"PBO:0078411"}


id: PBO:0002281
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.39","termid":"PBO:0002281"}


id: PBO:0073344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 6","termid":"PBO:0073344"}


id: PBO:0089627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-1 alpha folding chaperone, zinc finger protein Zpr1","termid":"PBO:0089627"}


id: PBO:0004760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial methyltransferase (predicted)","termid":"PBO:0004760"}


id: PBO:0015246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3 (predicted)","termid":"PBO:0015246"}


id: MONDO:1011718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kurosawa and Kusanagi hypercholesterolaemia, non-human animal","secondary_identifiers":["OMIA:001567"],"termid":"MONDO:1011718","xrefs":{"Monarch":{"xref_id":"1011718"}}}


id: GO:0042964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the reduction of thioredoxin, a small disulfide-containing redox protein that serves as a general protein disulfide oxidoreductase.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete thioredoxin reduction (obsolete GO:0042964)","synonyms":[{"name":"thioredoxin anabolism","type":"exact"},{"name":"thioredoxin biosynthesis","type":"exact"},{"name":"thioredoxin formation","type":"exact"},{"name":"thioredoxin synthesis","type":"exact"}],"termid":"GO:0042964"}


id: MONDO:0016671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic hemoglobinopathy usually characterized by mild microcytic hemolysis and, very rarely, vaso-occlusive complications. Severe manifestations have been reported, including hematuria, splenic infarction, acute chest syndrome, acute episodes of pain and reversible bone marrow necrosis. The genotype is characterized by an HbS allele in combination with an HbE variant (beta26glu>lys); symptoms are due to the low allelic expression of HbE leading to HbS predominance (65+/-5%).","definition_xrefs":["Orphanet:251375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inherited hemoglobinopathy","termid":"MONDO:0019050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"sickle cell-hemoglobin E disease syndrome","secondary_identifiers":["GARD:20700","MEDGEN:1669602","UMLS:C1112747"],"synonyms":[{"name":"HbSE disease","type":"exact"}],"termid":"MONDO:0016671","xrefs":{"Monarch":{"xref_id":"0016671"}}}


id: PBO:0055272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2699","termid":"PBO:0055272"}


id: PBO:0000658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L28/L44 (predicted)","termid":"PBO:0000658"}


id: PBO:0029864
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cortical_patch_localization_during_mitosis","termid":"PBO:0029864"}


id: MONDO:0003126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A capillary or cavernous hemangioma arising from the breast.","definition_xrefs":["NCIT:C5353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast benign neoplasm","termid":"MONDO:0000620"},{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast hemangioma","secondary_identifiers":["DOID:476","MEDGEN:163122","UMLS:C0853715"],"synonyms":[{"name":"angioma of breast","type":"exact"},{"name":"angioma of the breast","type":"exact"},{"name":"breast angioma","type":"exact"},{"name":"breast hemangioma","type":"exact"},{"name":"hemangioma of breast","type":"exact"},{"name":"hemangioma of the breast","type":"exact"}],"termid":"MONDO:0003126","xrefs":{"Monarch":{"xref_id":"0003126"}}}


id: SO:0001582
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A codon variant that changes at least one base of the first codon of a transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coding_sequence_variant","termid":"SO:0001580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"initiator_codon_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html","http://vat.gersteinlab.org/formats.php","loinc:LA6695-6"],"synonyms":[{"name":"Jannovar:initiator_codon_variant","type":"exact"},{"name":"VAT:startOverlap","type":"exact"},{"name":"initiatior codon variant","type":"exact"},{"name":"initiator codon change","type":"exact"},{"name":"snpEff:NON_SYNONYMOUS_START","type":"related"}],"termid":"SO:0001582"}


id: FYPO:0000312
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a normal germ tube, and undergoes septation, but does not go on to form a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with normal germ tube morphology","termid":"FYPO:0000310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination with normal, septated germ tube morphology","synonyms":[{"name":"inviable following spore germination with normal, septated germ tube morphology","type":"exact"},{"name":"inviable germinated spore with normal, septated germ tube morphology","type":"exact"},{"name":"lethal after spore germination with normal, septated germ tube morphology","type":"exact"}],"termid":"FYPO:0000312"}


id: PBO:0067315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 401, pseudogene","termid":"PBO:0067315"}


id: GO:0030038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Assembly of actin filament bundles in which the filaments are loosely packed (approximately 30-60 nm apart) and arranged with opposing polarities; the loose packing allows myosin (usually myosin-II) to enter the bundle.","definition_xrefs":["ISBN:0815316194","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle assembly","termid":"GO:0051017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036","GO:0044085"],"is_obsolete":false,"name":"contractile actin filament bundle assembly","termid":"GO:0030038"}


id: PBO:0038277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unspecified","termid":"PBO:0038277"}


id: PR:O94277
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- abz1 gene.","definition_xrefs":["UniProtKB:O94277","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminodeoxychorismate synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.29","synonyms":[{"name":"ADC synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"P-aminobenzoic acid synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PABA synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-abz1","type":"exact"},{"name":"para-aminobenzoate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94277"}


id: GO:1902081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of calcium ion import into sarcoplasmic reticulum.","definition_xrefs":["GOC:BHF","PMID:8349590","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"negative regulation of calcium ion transport","termid":"GO:0051926"},{"relation_name":"is_a","term_name":"regulation of calcium ion import into sarcoplasmic reticulum","termid":"GO:1902080"},{"relation_name":"negatively_regulates","term_name":"calcium ion import into sarcoplasmic reticulum","termid":"GO:1990036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of calcium ion import into sarcoplasmic reticulum","synonyms":[{"name":"down regulation of calcium ion import into sarcoplasmic reticulum","type":"exact"},{"name":"down-regulation of calcium ion import into sarcoplasmic reticulum","type":"exact"},{"name":"downregulation of calcium ion import into sarcoplasmic reticulum","type":"exact"},{"name":"inhibition of calcium ion import into sarcoplasmic reticulum","type":"narrow"}],"termid":"GO:1902081"}


id: PBO:0042372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD200 like, pseudogene","termid":"PBO:0042372"}


id: PR:O13824
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A regulator of nonsense transcripts 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12839:SF7","OMA:SCHPO01031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nonsense-mediated mRNA decay protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.08","secondary_identifiers":["UniProtKB:O13824"],"synonyms":[{"name":"Spom972h-UPF2","type":"exact"},{"name":"up-frameshift suppressor 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13824"}


id: SO:0001839
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence GTGRGAA, bound by CSL (CBF1/RBP-JK/Suppressor of Hairless/LAG-1) transcription factors.","definition_xrefs":["PMID:19101542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSL_response_element","synonyms":[{"name":"CSL response element","type":"exact"}],"termid":"SO:0001839"}


id: PR:Q9UT98
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pos5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT98"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH kinase pos5, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC323.01c","synonyms":[{"name":"Spom972h-pos5","type":"exact"}],"termid":"PR:Q9UT98"}


id: GO:0033516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-methionine from other compounds, including homoserine, via the intermediates O-phospho-L-homoserine and cystathionine.","definition_xrefs":["MetaCyc:PWY-702","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine biosynthetic process from L-homoserine via cystathionine","termid":"GO:0019279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"L-methionine biosynthetic process from homoserine via O-phospho-L-homoserine and cystathionine","synonyms":[{"name":"L-methionine anabolism from homoserine via O-phospho-L-homoserine and cystathionine","type":"exact"},{"name":"L-methionine formation from homoserine via O-phospho-L-homoserine and cystathionine","type":"exact"},{"name":"L-methionine synthesis from homoserine via O-phospho-L-homoserine and cystathionine","type":"exact"},{"name":"methionine biosynthetic process from homoserine via O-phospho-L-homoserine and cystathionine","type":"exact"}],"termid":"GO:0033516"}


id: GO:0044196
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small, dense body one or more of which are present in the nucleus of eukaryotic host cells.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell nuclear part","termid":"GO:0044094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell nucleolus","termid":"GO:0044196"}


id: GO:0001117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a protein-DNA-RNA complex into its constituent components.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA-RNA complex organization","termid":"GO:0001115"},{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-DNA-RNA complex disassembly","termid":"GO:0001117"}


id: PBO:0016086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein Pwp1 (predicted)","termid":"PBO:0016086"}


id: MONDO:0013899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Weill-Marchesani syndrome in which the cause of the disease is a mutation in the LTBP2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Weill-Marchesani syndrome","termid":"MONDO:0018096"},{"relation_name":"is_a","term_name":"LTBP2-related ocular dysgenesis","termid":"MONDO:0100236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Weill-Marchesani syndrome 3","secondary_identifiers":["MEDGEN:766699","OMIM:614819","GARD:15844","UMLS:C3553785"],"synonyms":[{"name":"LTBP2 Weill-Marchesani syndrome","type":"exact"},{"name":"WMS3","type":"related"},{"name":"Weill-Marchesani syndrome 3","type":"exact"},{"name":"Weill-Marchesani syndrome 3, recessive","type":"exact"},{"name":"Weill-Marchesani syndrome caused by mutation in LTBP2","type":"exact"},{"name":"Weill-Marchesani syndrome type 3","type":"exact"}],"termid":"MONDO:0013899","xrefs":{"Monarch":{"xref_id":"0013899"}}}


id: PBO:0109510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARGLU1 divergent transcript","termid":"PBO:0109510"}


id: PBO:0069130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 380, pseudogene","termid":"PBO:0069130"}


id: PBO:0003204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sid2-Mob1 kinase complex regulatory subunit Mob1","termid":"PBO:0003204"}


id: PBO:0045780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectodysplasin A","termid":"PBO:0045780"}


id: PBO:0030947
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_fusion","termid":"PBO:0030947"}


id: PBO:0084827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein required for iron-sulfur protein synthesis; performs scaffolding function during Fe/S cluster assembly; involved in Fe-S cluster assembly for both mitochondrial and cytosolic proteins; protein abundance increases under DNA replication stress; ISU2 has a paralog, ISU1, that arose from the whole genome duplication; isu1 isu2 double mutant is inviable; human homolog ISCU implicated in mitochondrial myopathy, can complement isu1 isu2 double mutant","termid":"PBO:0084827"}


id: PBO:0078462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyrotropin releasing hormone","termid":"PBO:0078462"}


id: GO:0072731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a papulacandin B stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"response to papulacandin B","termid":"GO:0072730"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to papulacandin B","termid":"GO:0072731"}


id: GO:1902435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of male mating behavior.","definition_xrefs":["GOC:TermGenie","PMID:24089208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"male mating behavior","termid":"GO:0060179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of male mating behavior","termid":"GO:1902435"}


id: GO:1900821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of orlandin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"orlandin metabolic process","termid":"GO:1900819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"orlandin biosynthetic process","synonyms":[{"name":"orlandin anabolism","type":"exact"},{"name":"orlandin biosynthesis","type":"exact"},{"name":"orlandin formation","type":"exact"},{"name":"orlandin synthesis","type":"exact"}],"termid":"GO:1900821"}


id: GO:0004693
data:
  {"annotated_genes":["SJAG_03061","SJAG_01000","SJAG_03421","SJAG_03048","SJAG_01825","SJAG_00342","SJAG_03967","SJAG_00150"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91627,93826,95294,101900,105188,105537,108525,108526,114839],"is_not":false,"summary":null,"term":"GO:0004693"}]},"cv_name":"molecular_function","definition":"Cyclin-dependent catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.","definition_xrefs":["PMID:7877684","GOC:pr","GOC:rn","PMID:9841670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase activity","termid":"GO:0097472"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00342":null,"SJAG_01000":null,"SJAG_01825":null,"SJAG_03048":null,"SJAG_03061":null,"SJAG_03421":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0004672","GO:0140096","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"cyclin-dependent protein serine/threonine kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2430533","Reactome:R-HSA-6805109","Reactome:R-HSA-174132","Reactome:R-HSA-69005","Reactome:R-HSA-187520","Reactome:R-HSA-1226094","Reactome:R-HSA-2984220","Reactome:R-HSA-68944","Reactome:R-HSA-187959","Reactome:R-HSA-2468293","Reactome:R-HSA-69227","Reactome:R-HSA-69756","Reactome:R-HSA-2990882","Reactome:R-HSA-5244669","Reactome:R-HSA-9008412","Reactome:R-HSA-174251","Reactome:R-HSA-3788705","Reactome:R-HSA-380278","Reactome:R-HSA-187948","Reactome:R-HSA-2245218","Reactome:R-HSA-4086410","Reactome:R-HSA-69754","Reactome:R-HSA-187916","Reactome:R-HSA-1226095","Reactome:R-HSA-2294600","Reactome:R-HSA-174079","Reactome:R-HSA-6797606","Reactome:R-HSA-174122","Reactome:R-HSA-1912391","Reactome:R-HSA-2514854","Reactome:R-HSA-4088024","Reactome:R-HSA-6793661","EC:2.7.11.22","Reactome:R-HSA-9686521","Reactome:R-HSA-2468287","Reactome:R-HSA-9009282","Reactome:R-HSA-2172183","Reactome:R-HSA-5195402","Reactome:R-HSA-188390","Reactome:R-HSA-9624800","Reactome:R-HSA-180047","Reactome:R-HSA-5692755","GO:0016537","Reactome:R-HSA-2220971"],"synonyms":[{"name":"ATP:cyclin phosphotransferase activity","type":"related"},{"name":"CDK","type":"related"},{"name":"CDK activity","type":"exact"},{"name":"CDK, catalytic subunit activity","type":"exact"},{"name":"Cdk-activating protein kinase activity","type":"related"},{"name":"D-type cyclin kinase activity","type":"narrow"},{"name":"cdc2 kinase activity","type":"narrow"},{"name":"cdk-activating kinase activity","type":"related"},{"name":"cyclin D-cdk6 kinase activity","type":"narrow"},{"name":"cyclin D-dependent kinase activity","type":"narrow"},{"name":"cyclin E kinase activity","type":"narrow"},{"name":"cyclin-A associated kinase activity","type":"narrow"},{"name":"cyclin-dependent kinase 6 activity","type":"narrow"},{"name":"cyclin-dependent kinase activity","type":"broad"},{"name":"cyclin-dependent kinase-2 activity","type":"narrow"},{"name":"cyclin-dependent kinase-4 activity","type":"narrow"},{"name":"cyclin-dependent protein kinase activity","type":"broad"},{"name":"cyclin-dependent protein kinase, intrinsic catalyst activity","type":"exact"},{"name":"neuronal cdc2-like kinase activity","type":"narrow"}],"termid":"GO:0004693","terms_by_termid":{"GO:0004693":null}}


id: GO:0048107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 4-amino-3-isothiazolinone, five-membered saturated heterocyclic ring structures containing a sulfur and a nitrogen in the 1-position and 2-positions respectively.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"4-amino-3-isothiazolidinone biosynthetic process","synonyms":[{"name":"4-amino-3-isothiazolidinone anabolism","type":"exact"},{"name":"4-amino-3-isothiazolidinone biosynthesis","type":"exact"},{"name":"4-amino-3-isothiazolidinone formation","type":"exact"},{"name":"4-amino-3-isothiazolidinone synthesis","type":"exact"}],"termid":"GO:0048107"}


id: PBO:0053079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lebercilin LCA5 like","termid":"PBO:0053079"}


id: GO:0000127
data:
  {"annotated_genes":["SJAG_02815","SJAG_01827","SJAG_03354","SJAG_03546","SJAG_05339","SJAG_00585"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87661,99079,106413,108620,112138,114862],"is_not":false,"summary":null,"term":"GO:0000127"}]},"cv_name":"cellular_component","definition":"A heterotrimeric transcription factor complex that is involved in regulating transcription from RNA polymerase III (Pol III) promoters. TFIIIC contains three conserved subunits that associate with the proximal Pol III promoter element, and additional subunits that associate with sequence elements downstream of the promoter and are more diverged among species. It also functions as a boundary element to partition genome content into distinct domains outside Pol III promoter regions.","definition_xrefs":["PMID:16751097","GOC:mah","GOC:vw","PMID:11433012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase III transcription regulator complex","termid":"GO:0090576"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00585":null,"SJAG_01827":null,"SJAG_02815":null,"SJAG_03354":null,"SJAG_03546":null,"SJAG_05339":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"transcription factor TFIIIC complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000127","terms_by_termid":{"GO:0000127":null}}


id: MOD:01024
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to one of several monohydroxylated proline residues, including 3-hydroxy-L-proline and 4-hydroxy-L-proline.","definition_xrefs":["Unimod:35#P","DeltaMass:0","OMSSA:62"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated residue","termid":"MOD:00425"},{"relation_name":"is_a","term_name":"residues isobaric at 113.047678 Da","termid":"MOD:00594"},{"relation_name":"is_a","term_name":"hydroxylated proline","termid":"MOD:00678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monohydroxylated proline","synonyms":[{"name":"Hy1Pro","type":"exact"},{"name":"Hydroxyproline","type":"exact"},{"name":"Hyp","type":"exact"},{"name":"Oxidation","type":"related"},{"name":"hydroxylationp","type":"exact"}],"termid":"MOD:01024"}


id: GO:0047690
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-asparagine + H+ + hydroxylamine = beta-L-aspartylhydroxamate + NH4.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete aspartyltransferase activity (obsolete GO:0047690)","synonyms":[{"name":"L-asparagine:hydroxylamine gamma-aspartyltransferase activity","type":"related"},{"name":"aspartotransferase activity","type":"related"},{"name":"beta-aspartyl transferase activity","type":"related"}],"termid":"GO:0047690"}


id: PBO:0052256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KDEL endoplasmic reticulum protein retention receptor 3","termid":"PBO:0052256"}


id: PBO:0005254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M phase inhibitor protein kinase Wee1","termid":"PBO:0005254"}


id: GO:0060952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a cardiac glial cell over time, from its formation to the fully functional mature cell.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell development","termid":"GO:0021782"},{"relation_name":"is_a","term_name":"cardiac cell development","termid":"GO:0055006"},{"relation_name":"part_of","term_name":"cardiac glial cell differentiation","termid":"GO:0060950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac glial cell development","termid":"GO:0060952"}


id: PBO:0040701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2L1 antisense RNA 1","termid":"PBO:0040701"}


id: PBO:0084360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-homoserine-O-acetyltransferase; catalyzes the conversion of homoserine to O-acetyl homoserine which is the first step of the methionine biosynthetic pathway","termid":"PBO:0084360"}


id: GO:0018158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a protein amino acid by oxidation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein oxidation","synonyms":[{"name":"protein amino acid oxidation","type":"exact"}],"termid":"GO:0018158"}


id: MONDO:0013644
data:
  {"annotated_genes":["SJAG_02286"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85310],"is_not":false,"summary":null,"term":"MONDO:0013644"}]},"cv_name":"mondo","definition":"Any Charcot-Marie-Tooth disease in which the cause of the disease is a mutation in the DYNC1H1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"},{"relation_name":"is_a","term_name":"dyneinopathy","termid":"MONDO:1040031"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02286":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005244","MONDO:0005328"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease axonal type 2O","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614228","MEDGEN:481850","UMLS:C3280220","GARD:12434","Orphanet:284232","DOID:0110175"],"synonyms":[{"name":"CMT2O","type":"exact"},{"name":"Charcot-Marie-Tooth disease caused by mutation in DYNC1H1","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 2O","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, autosomal dominant, type 2O","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 20","type":"exact"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2O","type":"related"},{"name":"Charcot-Marie-Tooth neuropathy axonal type 2O","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, axonal, type 2O","type":"related"},{"name":"DYNC1H1 Charcot-Marie-Tooth disease","type":"exact"},{"name":"autosomal dominant Charcot-Marie-Tooth disease type 2O","type":"exact"},{"name":"autosomal dominant axonal Charcot-Marie-Tooth disease type 2O","type":"exact"}],"termid":"MONDO:0013644","terms_by_termid":{"MONDO:0013644":null},"xrefs":{"Monarch":{"xref_id":"0013644"}}}


id: GO:0075233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of spore movement on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of spore movement on or near host (obsolete GO:0075233)","termid":"GO:0075233"}


id: RO:HOM0000004
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Homoplasy that involves different underlying mechanisms or structures.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_homoplasy_relationship_with","termid":"RO:HOM0000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_convergence_relationship_with","synonyms":[{"name":"analogy","type":"related"}],"termid":"RO:HOM0000004"}


id: PBO:0028323
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_mitochondrion","termid":"PBO:0028323"}


id: GO:1900375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A positive regulation of transcription from RNA polymerase II promoter that results in positive regulation of inositol biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:2004420","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900375)","synonyms":[{"name":"activation of inositol anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of inositol formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of inositol synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of myo-inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of myo-inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of vitamin Bh biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of vitamin Bh biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of inositol anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of inositol formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of inositol synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of myo-inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of myo-inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of vitamin Bh biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of vitamin Bh biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of inositol anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of inositol formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of inositol synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of myo-inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of myo-inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of vitamin Bh biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of vitamin Bh biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of inositol anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of inositol formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of inositol synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of myo-inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up-regulation of myo-inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up-regulation of vitamin Bh biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of vitamin Bh biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of inositol anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of inositol formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of inositol synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of myo-inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"upregulation of myo-inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"upregulation of vitamin Bh biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of vitamin Bh biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900375"}


id: GO:0039518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host cytokine activity.","definition_xrefs":["GOC:sp","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host cytokine activity (obsolete GO:0039518)","synonyms":[{"name":"down-regulation by virus of host cytokine activity","type":"exact"},{"name":"downregulation by virus of host cytokine activity","type":"exact"},{"name":"inhibition by virus of host cytokine activity","type":"narrow"},{"name":"negative regulation by virus of host cytokine activity","type":"exact"}],"termid":"GO:0039518"}


id: PBO:0057908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3611","termid":"PBO:0057908"}


id: PBO:0052436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLC2 antisense RNA 1","termid":"PBO:0052436"}


id: GO:0007560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures derived from an imaginal disc are generated and organized. The imaginal discs are epithelial infoldings in the larvae of holometabolous insects that develop into adult appendages (legs, antennae, wings, etc.) during metamorphosis from larval to adult form.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"imaginal disc development","termid":"GO:0007444"},{"relation_name":"part_of","term_name":"metamorphosis","termid":"GO:0007552"},{"relation_name":"part_of","term_name":"instar larval or pupal morphogenesis","termid":"GO:0048707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc morphogenesis","secondary_identifiers":["GO:0007452"],"synonyms":[{"name":"imaginal disc metamorphosis","type":"exact"}],"termid":"GO:0007560"}


id: PR:O94659
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nog1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar GTP-binding protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.01c","synonyms":[{"name":"Spom972h-nog1","type":"exact"}],"termid":"PR:O94659"}


id: MONDO:0005535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Crohn's disease affecting the mouth.","definition_xrefs":["EFO:0005625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Crohn disease","termid":"MONDO:0005011"},{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"oral Crohn disease","secondary_identifiers":["SCTID:196578009","UMLS:C0399497","MEDGEN:585601"],"synonyms":[{"name":"oral Crohn's disease","type":"exact"}],"termid":"MONDO:0005535","xrefs":{"Monarch":{"xref_id":"0005535"}}}


id: PBO:0040639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BASP1 pseudogene 1","termid":"PBO:0040639"}


id: PBO:0088321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I general transcription initiation factor subunit Rrn6","termid":"PBO:0088321"}


id: MONDO:0006706
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with BACTERIA of the order Bifidobacteriales. This includes infections in the genera BIFIDOBACTERIUM and GARDNERELLA, in the family Bifidobacteriaceae.","definition_xrefs":["MESH:D039941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bifidobacteriales infectious disease","secondary_identifiers":["UMLS:C1136339","MEDGEN:209748"],"synonyms":[{"name":"Bifidobacteriales caused disease or disorder","type":"exact"},{"name":"Bifidobacteriales disease or disorder","type":"exact"},{"name":"Bifidobacteriales infection","type":"related"},{"name":"infection, Bifidobacteriales","type":"related"},{"name":"infections, Bifidobacteriales","type":"related"}],"termid":"MONDO:0006706","xrefs":{"Monarch":{"xref_id":"0006706"}}}


id: PBO:0114605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocytic adaptor, ENTH/VHS domain Yap18","termid":"PBO:0114605"}


id: PBO:0088359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis protein Dph4","termid":"PBO:0088359"}


id: PBO:0066974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 277","termid":"PBO:0066974"}


id: PBO:0088856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase Akr1","termid":"PBO:0088856"}


id: MONDO:0008856
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to mycobacterial diseases","termid":"MONDO:0019146"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunodeficiency 27A","secondary_identifiers":["MEDGEN:860386","UMLS:C4011949","DOID:0111955","OMIM:209950","NCIT:C176806"],"synonyms":[{"name":"IFNGR1 deficiency, autosomal recessive","type":"related"},{"name":"IMD27A","type":"related"},{"name":"atypical mycobacterial infection, disseminated","type":"related"},{"name":"atypical mycobacterial infection, familial disseminated","type":"related"},{"name":"atypical mycobacteriosis, familial","type":"related"},{"name":"immunodeficiency 27A","type":"exact"},{"name":"immunodeficiency 27A, Mycobacteriosis, autosomal recessive","type":"related"},{"name":"immunodeficiency 27A, mycobacteriosis, AR","type":"exact"},{"name":"immunodeficiency type 27A","type":"exact"},{"name":"mycobacterial disease, Mendelian susceptibility to","type":"related"}],"termid":"MONDO:0008856","xrefs":{"Monarch":{"xref_id":"0008856"}}}


id: GO:0099139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process during chimeric sorocarp development that increases by which a cell increases the number of spore cells sharing its genotype at the expense of cells of other genotypes.","definition_xrefs":["PMID:18272966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sorocarp spore cell differentiation","termid":"GO:1901261"},{"relation_name":"part_of","term_name":"chimeric sorocarp development","termid":"GO:0099134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cheating during chimeric sorocarp development","termid":"GO:0099139"}


id: PBO:0056386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPK associated protein 1","termid":"PBO:0056386"}


id: PBO:0000298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA R52","termid":"PBO:0000298"}


id: MONDO:0958302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A renal cell carcinoma with MiT translocations that is characterized by the presence of the chromosomal translocation t(6;11) which fuses the TFEB transcription factor gene, with the MALAT1 gene.","definition_xrefs":["DOID:0081414|https://orcid.org/0000-0002-4142-7153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MIT family translocation renal cell carcinoma","termid":"MONDO:0017886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"TFEB-rearranged renal cell carcinoma","secondary_identifiers":["MEDGEN:1664261","UMLS:C4745249","DOID:0081414"],"termid":"MONDO:0958302","xrefs":{"Monarch":{"xref_id":"0958302"}}}


id: MONDO:0044319
data:
  {"annotated_genes":["SJAG_02774"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86195],"is_not":false,"summary":null,"term":"MONDO:0044319"}]},"cv_name":"mondo","definition":"IDDFSDA is an autosomal recessive severe multisystem disorder characterized by poor overall growth, developmental delay, early-onset seizures, intellectual disability, and dysmorphic features. There is phenotypic variability. The most severely affected patients have a neurodevelopmental disorder with microcephaly, absent speech, and inability to walk, and they require feeding tubes. Some patients have congenital heart defects or nonspecific abnormalities on brain imaging. Less severely affected individuals have mild to moderate intellectual disability with normal speech and motor development (summary by {1:Santiago-Sim et al., 2017}).","definition_xrefs":["OMIM:617452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"monogenic epilepsy","termid":"MONDO:0015653"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02774":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005027"],"is_obsolete":false,"name":"intellectual developmental disorder with dysmorphic facies, seizures, and distal limb anomalies","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4479520","MEDGEN:1375601","GARD:17942","Orphanet:505237"],"synonyms":[{"name":"IDDFSDA","type":"related"},{"name":"intellectual developmental disorder with dysmorphic facies, seizures, and distal limb anomalies","type":"exact"}],"termid":"MONDO:0044319","terms_by_termid":{"MONDO:0044319":null},"xrefs":{"Monarch":{"xref_id":"0044319"}}}


id: GO:0004742
data:
  {"annotated_genes":["SJAG_02158","SJAG_00866"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113734,117958],"is_not":false,"summary":null,"term":"GO:0004742"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-N6-dihydrolipoyl-L-lysyl-[protein] + acetyl-CoA = (R)-N6-(S8-acetyldihydrolipoyl)-L-lysyl-[protein] + CoA.","definition_xrefs":["RHEA:17017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acetyltransferase activity","termid":"GO:0016418"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00866":null,"SJAG_02158":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"dihydrolipoyllysine-residue acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9861667","GO:0030523","EC:2.3.1.12"],"synonyms":[{"name":"acetyl-CoA: enzyme-6-N-(dihydrolipoyl)lysine S-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA: enzyme-N6-(dihydrolipoyl)lysine S-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:dihydrolipoamide S-acetyltransferase activity","type":"related"},{"name":"dihydrolipoamide S-acetyltransferase activity","type":"exact"},{"name":"dihydrolipoamide S-acyltransferase activity","type":"related"},{"name":"dihydrolipoate acetyltransferase activity","type":"related"},{"name":"dihydrolipoic transacetylase activity","type":"related"},{"name":"dihydrolipoyl acetyltransferase activity","type":"related"},{"name":"enzyme-dihydrolipoyllysine:acetyl-CoA S-acetyltransferase activity","type":"related"},{"name":"lipoate acetyltransferase activity","type":"related"},{"name":"lipoate transacetylase activity","type":"related"},{"name":"lipoic acetyltransferase activity","type":"related"},{"name":"lipoic acid acetyltransferase activity","type":"related"},{"name":"lipoic transacetylase activity","type":"related"},{"name":"lipoylacetyltransferase activity","type":"related"},{"name":"thioltransacetylase A activity","type":"narrow"},{"name":"transacetylase X activity","type":"narrow"}],"termid":"GO:0004742","terms_by_termid":{"GO:0004742":null}}


id: GO:1902858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving propionyl-CoA.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators","GO_REF:0000068","PMID:15514053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA metabolic process","termid":"GO:0035337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0055086","GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"propionyl-CoA metabolic process","synonyms":[{"name":"propionyl-CoA metabolism","type":"exact"}],"termid":"GO:1902858"}


id: PBO:0070898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 6","termid":"PBO:0070898"}


id: GO:0061823
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ring-like structure observed at the base of the ciliary cap of insect spermatids. This structure may anchor the axoneme to the ciliary cap membrane and/or act as a diffusion barrier, proposed to be analogous to the annulus of mammalian sperm flagellum.","definition_xrefs":["PMID:4903810","PMID:25447994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ring centriole","termid":"GO:0061823"}


id: GO:0042496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a diacylated bacterial lipopeptide stimulus is received by a cell and converted into a molecular signal. Diacylated bacterial lipoproteins are lipopeptides of bacterial origin containing a nonprotein moiety consisting of two acyl groups.","definition_xrefs":["PMID:12524386","PMID:12077222","PMID:2757794","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of bacterial lipopeptide","termid":"GO:0070340"},{"relation_name":"is_a","term_name":"response to diacyl bacterial lipopeptide","termid":"GO:0071724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of diacyl bacterial lipopeptide","synonyms":[{"name":"detection of diacylated bacterial lipoprotein","type":"exact"},{"name":"perception of diacylated bacterial lipopeptide","type":"related"},{"name":"perception of diacylated bacterial lipoprotein","type":"related"}],"termid":"GO:0042496"}


id: PBO:0072243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 18","termid":"PBO:0072243"}


id: PBO:0063824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoethanolamine/phosphocholine phosphatase 1","termid":"PBO:0063824"}


id: PBO:0084988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP(+)-dependent serine dehydrogenase and carbonyl reductase; acts on serine, L-allo-threonine, and other 3-hydroxy acids; green fluorescent protein fusion protein localizes to the cytoplasm and nucleus; may interact with ribosomes, based on co-purification experiments","termid":"PBO:0084988"}


id: PBO:0084178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone acetyltransferase catalytic subunit of NuA3 complex; acetylates histone H3, involved in transcriptional silencing; homolog of the mammalian MOZ proto-oncogene; mutant has aneuploidy tolerance; sas3gcn5 double mutation is lethal","termid":"PBO:0084178"}


id: GO:1990942
data:
  {"annotated_genes":["SJAG_01224","SJAG_02451","SJAG_01613","SJAG_02336","SJAG_01297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93683,98123,98729,103397,107744],"is_not":false,"summary":null,"term":"GO:1990942"}]},"cv_name":"biological_process","definition":"A mechanism to recapture 'lost' chromosomes (chromosomes which have become detached from the spindle) during metaphase of mitotic chromosome segregation. Chromosomes with unattached kinetochores are migrated along (non polar) spindle microtubules to the mitotic spindle pole body by a combination of microtubule depolymerisation and 'kinetochore sliding' (migration of the chromosome along the microtubule). The chromosome subsequently migrates along the polar spindle microtubule to the metaphase plate.","definition_xrefs":["PMID:18256284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of chromosome localization","termid":"GO:0051303"},{"relation_name":"part_of","term_name":"mitotic metaphase chromosome alignment","termid":"GO:0007080"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01224":null,"SJAG_01297":null,"SJAG_01613":null,"SJAG_02336":null,"SJAG_02451":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000070","GO:0007049","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"mitotic metaphase chromosome recapture","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1905185"],"synonyms":[{"name":"kinetochore retrieval","type":"exact"},{"name":"metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"microtubule sliding involved in kinetochore retrieval","type":"exact"},{"name":"microtubule sliding involved in metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"microtubule sliding involved in mitotic metaphase chromosome recapture","type":"related"},{"name":"microtubule sliding involved in sister kinetochore recapture","type":"exact"},{"name":"sister kinetochore recapture","type":"exact"}],"termid":"GO:1990942","terms_by_termid":{"GO:1990942":null}}


