# terms

id: MONDO:0007922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lymphedema - distichiasis is a rare syndromic lymphedema disorder characterized by lower-limb lymphedema and varying degrees of abnormal growth of eyelashes from the orifices of the Meibomian glands (distichiasis), with occasional associated manifestations.","definition_xrefs":["Orphanet:33001"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete eyebrow/eyelashes distichiasis (obsolete MONDO:0020190)","termid":"MONDO:0020190"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"lymphatic malformation","termid":"MONDO:0019313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphedema-distichiasis syndrome","secondary_identifiers":["MEDGEN:75566","GARD:333","DOID:0111509","NORD:1383","SCTID:8634009","ICD10CM:Q82.0","ICD9:743.63","MESH:C537710","OMIM:153400","NCIT:C128191","UMLS:C0265345"],"synonyms":[{"name":"hereditary lymphedema-distichiasis syndrome (subtype)","type":"related"},{"name":"lymphedema with distichiasis","type":"related"},{"name":"lymphedema-distichiasis syndrome","type":"exact"},{"name":"lymphedema-distichiasis syndrome with renal disease and diabetes mellitus","type":"related"}],"termid":"MONDO:0007922","xrefs":{"Monarch":{"xref_id":"0007922"}}}


id: GO:0097598
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small amount of cytoplasm surrounded by a cell membrane that is generally retained in spermatozoa after spermiogenesis, when the majority of the cytoplasm is phagocytosed by Sertoli cells to produce what are called residual bodies. Initially, the droplet is located at the neck just behind the head of an elongated spermatid. During epididymal transit, the cytoplasmic droplet migrates caudally to the annulus at the end of the midpiece; the exact position and time varies by species. The cytoplasmic droplet consists of lipids, lipoproteins, RNAs, a variety of hydrolytic enzymes, receptors, ion channels, and Golgi-derived vesicles. The droplet may be involved in regulatory volume loss (RVD) at ejaculation, and in most species, though not in humans, the cytoplasmic droplet is lost at ejaculation. Note that the cytoplasmic droplet is distinct from 'excessive residual cytoplasm' that sometimes remains in epididymal spermatozoa, particularly when spermiogenesis has been disrupted.","definition_xrefs":["GOC:krc","PMID:12672117","GOC:vesicles","PMID:21076437","PMID:23159014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"sperm cytoplasmic droplet","synonyms":[{"name":"sperm residual cytoplasm","type":"exact"}],"termid":"GO:0097598"}


id: PBO:0001239
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"from cerevisie","termid":"PBO:0001239"}


id: PBO:0052833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 1-3","termid":"PBO:0052833"}


id: GO:1902346
data:
  {"annotated_genes":["SJAG_02294"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100143],"is_not":false,"summary":null,"term":"GO:1902346"}]},"cv_name":"biological_process","definition":"Any meiotic strand displacement that is involved in double-strand break repair via synthesis-dependent strand annealing (SDSA).","definition_xrefs":["GOC:TermGenie","GOC:al","PMID:22723423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic strand displacement","termid":"GO:0000714"},{"relation_name":"part_of","term_name":"double-strand break repair via synthesis-dependent strand annealing","termid":"GO:0045003"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006281","GO:0006259","GO:0007049"],"is_obsolete":false,"name":"meiotic strand displacement involved in double-strand break repair via SDSA","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"meiotic D-loop dissociation involved in double-strand break repair via synthesis-dependent strand annealing","type":"related"},{"name":"meiotic D-loop dissociation involved in mitotic gene conversion","type":"related"},{"name":"meiotic D-loop processing involved in double-strand break repair via synthesis-dependent strand annealing","type":"related"},{"name":"meiotic D-loop processing involved in mitotic gene conversion","type":"related"},{"name":"meiotic displacement loop dissociation involved in double-strand break repair via synthesis-dependent strand annealing","type":"related"},{"name":"meiotic displacement loop dissociation involved in mitotic gene conversion","type":"related"},{"name":"meiotic displacement loop processing involved in double-strand break repair via synthesis-dependent strand annealing","type":"related"},{"name":"meiotic displacement loop processing involved in mitotic gene conversion","type":"related"},{"name":"meiotic strand displacement involved in SDSA","type":"broad"},{"name":"meiotic strand displacement involved in double-strand break repair via synthesis-dependent strand annealing","type":"exact"},{"name":"meiotic strand displacement involved in mitotic gene conversion","type":"related"}],"termid":"GO:1902346","terms_by_termid":{"GO:1902346":null}}


id: GO:0003333
data:
  {"annotated_genes":["SJAG_03899","SJAG_03400","SJAG_03970","SJAG_03591","SJAG_05346","SJAG_00019","SJAG_00149","SJAG_03256","SJAG_00877","SJAG_01636","SJAG_04135","SJAG_04296","SJAG_01096","SJAG_01770","SJAG_04725","SJAG_01923","SJAG_00522","SJAG_04588","SJAG_06598","SJAG_02955","SJAG_04787","SJAG_02946","SJAG_00051","SJAG_04957","SJAG_01994","SJAG_04295","SJAG_04637","SJAG_03827","SJAG_04983","SJAG_04903","SJAG_02133","SJAG_04715","SJAG_02716","SJAG_02941","SJAG_00543","SJAG_00015","SJAG_01336","SJAG_03829","SJAG_02029","SJAG_01998","SJAG_02947","SJAG_00991","SJAG_05342","SJAG_04718","SJAG_04984","SJAG_02605","SJAG_02062","SJAG_02113","SJAG_02150","SJAG_00626"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75050,76181,77236,87039,87040,87041,87042,87043,87044,87045,87046,87083,87084,87085,87086,89181,95186,99521,103027,103267,105524,108920,108927,110078,113192,117750,117751,117752,117753,117754,117755,117756,117757,117855,118503],"is_not":false,"summary":null,"term":"GO:0003333"},{"annotations":[95511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032974"},{"annotations":[103331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032975"},{"annotations":[102300,109518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990591"},{"annotations":[89874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034488"},{"annotations":[94078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034490"},{"annotations":[103525,103527,87914,63879,103526,96834,103524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990822"},{"annotations":[113187,63188,118506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903712"},{"annotations":[97724,99735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904983"},{"annotations":[109519,102301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903714"},{"annotations":[95512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902475"},{"annotations":[99856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097638"},{"annotations":[96849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990818"},{"annotations":[103332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"},{"annotations":[98324,63048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903826"},{"annotations":[96045],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070778"},{"annotations":[97725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110141"},{"annotations":[103334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090515"},{"annotations":[96046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015813"},{"annotations":[96850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[103335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[99857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097639"},{"annotations":[102302,103336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901482"},{"annotations":[96851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089707"},{"annotations":[103337,109520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"},{"annotations":[103338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090516"},{"annotations":[103339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090514"},{"annotations":[107396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990575"},{"annotations":[87565],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905533"},{"annotations":[91226,92812,98379,110030],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905589"},{"annotations":[91227,92813,98380],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905534"},{"annotations":[92814],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905626"},{"annotations":[99850,100712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905647"},{"annotations":[90098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140300"}]},"cv_name":"biological_process","definition":"The process in which an amino acid is transported across a membrane.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":50,"genes_by_uniquename":{"SJAG_00015":null,"SJAG_00019":null,"SJAG_00051":null,"SJAG_00149":null,"SJAG_00522":null,"SJAG_00543":null,"SJAG_00626":null,"SJAG_00877":null,"SJAG_00991":null,"SJAG_01096":null,"SJAG_01336":null,"SJAG_01636":null,"SJAG_01770":null,"SJAG_01923":null,"SJAG_01994":null,"SJAG_01998":null,"SJAG_02029":null,"SJAG_02062":null,"SJAG_02113":null,"SJAG_02133":null,"SJAG_02150":null,"SJAG_02605":null,"SJAG_02716":null,"SJAG_02941":null,"SJAG_02946":null,"SJAG_02947":null,"SJAG_02955":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03591":null,"SJAG_03827":null,"SJAG_03829":null,"SJAG_03899":null,"SJAG_03970":null,"SJAG_04135":null,"SJAG_04295":null,"SJAG_04296":null,"SJAG_04588":null,"SJAG_04637":null,"SJAG_04715":null,"SJAG_04718":null,"SJAG_04725":null,"SJAG_04787":null,"SJAG_04903":null,"SJAG_04957":null,"SJAG_04983":null,"SJAG_04984":null,"SJAG_05342":null,"SJAG_05346":null,"SJAG_06598":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"amino acid transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"amino acid membrane transport","type":"exact"}],"termid":"GO:0003333","terms_by_termid":{"GO:0003333":null,"GO:0015813":null,"GO:0032974":null,"GO:0032975":null,"GO:0034488":null,"GO:0034490":null,"GO:0070778":null,"GO:0089707":null,"GO:0089708":null,"GO:0090513":null,"GO:0090514":null,"GO:0090515":null,"GO:0090516":null,"GO:0090517":null,"GO:0090518":null,"GO:0097638":null,"GO:0097639":null,"GO:0110141":null,"GO:0140300":null,"GO:1901482":null,"GO:1902475":null,"GO:1903712":null,"GO:1903714":null,"GO:1903826":null,"GO:1904983":null,"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null,"GO:1905647":null,"GO:1990575":null,"GO:1990591":null,"GO:1990818":null,"GO:1990822":null}}


id: PBO:0004943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PPR repeat protein Ppr8","termid":"PBO:0004943"}


id: PBO:0002667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medial ring protein Mid2","termid":"PBO:0002667"}


id: GO:0009992
data:
  {"annotated_genes":["SJAG_04668"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91887],"is_not":false,"summary":null,"term":"GO:0009992"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of water within a cell.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell volume homeostasis","termid":"GO:0006884"},{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04668":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular water homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular osmoregulation","type":"related"},{"name":"cellular water homeostasis","type":"exact"}],"termid":"GO:0009992","terms_by_termid":{"GO:0009992":null}}


id: MOD:01154
data:
  {"annotated_genes":["SJAG_03632","SJAG_02980","SJAG_03524","SJAG_02902"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[79973,80056,80074,80220],"is_not":false,"summary":null,"term":"MOD:01154"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid to pyruvic acid.","definition_xrefs":["RESID:AA0127","PubMed:10085076","PubMed:3042771","PubMed:8464063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 71.0-71.1 Da","termid":"MOD:00769"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02902":null,"SJAG_02980":null,"SJAG_03524":null,"SJAG_03632":null},"genotype_count":0,"is_obsolete":false,"name":"pyruvic acid","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"2-oxopropanoic acid","type":"exact"},{"name":"MOD_RES Pyruvic acid (Cys)","type":"exact"},{"name":"MOD_RES Pyruvic acid (Ser)","type":"exact"},{"name":"pyruvic acid","type":"exact"}],"termid":"MOD:01154","terms_by_termid":{"MOD:01154":null}}


id: MONDO:0033181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenytoin or carbamazepine toxicity","secondary_identifiers":["Orphanet:414750"],"termid":"MONDO:0033181","xrefs":{"Monarch":{"xref_id":"0033181"}}}


id: PBO:0068069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 374","termid":"PBO:0068069"}


id: GO:0021801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The radial migration of neuronal or glial precursor cells along radial glial cells during the development of the cerebral cortex.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:cls","PMID:12626695","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral cortex radially oriented cell migration","termid":"GO:0021799"},{"relation_name":"is_a","term_name":"telencephalon glial cell migration","termid":"GO:0022030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex radial glia-guided migration","synonyms":[{"name":"cerebral cortex radial glia guided migration","type":"exact"},{"name":"cerebral cortex radial glia-dependent cell migration","type":"exact"},{"name":"glial-guided locomotion","type":"related"}],"termid":"GO:0021801"}


id: FYPO:0003854
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to an oligomycin antibiotic. Cells stop growing (and may die) at a concentration of oligomycin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002683","FYPO:0000003","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to oligomycin","synonyms":[{"name":"hypersensitive to oligomycin","type":"exact"},{"name":"sensitive to oligomycin during mitotic cell cycle","type":"related"},{"name":"sensitive to oligomycin during vegetative growth","type":"exact"}],"termid":"FYPO:0003854"}


id: PBO:0059035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 24","termid":"PBO:0059035"}


id: PBO:0051388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda constant 5 (pseudogene)","termid":"PBO:0051388"}


id: PBO:0060597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-SMC condensin I complex subunit D2 pseudogene 1","termid":"PBO:0060597"}


id: MONDO:0016656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 7","termid":"MONDO:0016906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"7q31 microdeletion syndrome","secondary_identifiers":["UMLS:C4750783","MEDGEN:1664416","GARD:20692","Orphanet:251061"],"synonyms":[{"name":"Del(7)(q31)","type":"exact"},{"name":"monosomy 7q31","type":"exact"}],"termid":"MONDO:0016656","xrefs":{"Monarch":{"xref_id":"0016656"}}}


id: PBO:0051316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR2-118 (pseudogene)","termid":"PBO:0051316"}


id: PBO:0028148
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_box_C/D_snoRNA_3'-end_processing","termid":"PBO:0028148"}


id: PBO:0089419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMPACT domain protein, possible chaperone","termid":"PBO:0089419"}


id: PBO:0034543
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_nucleus_during_cellular_response_to_hydroxyurea","termid":"PBO:0034543"}


id: PBO:0079789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A10","termid":"PBO:0079789"}


id: PBO:0079465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TVP23C pseudogene 1","termid":"PBO:0079465"}


id: PBO:0059660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 26","termid":"PBO:0059660"}


id: FYPO:0000987
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular response phenotype in which pheromone-responsive positive regulation of transcription from an RNA polymerase II promoter results in a lower-than-normal level of transcription at a given pheromone level.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased transcriptional response to pheromone at normal pheromone level (obsolete FYPO:0000987)","synonyms":[{"name":"decreased positive regulation of transcription from RNA polymerase II promoter by pheromones at normal pheromone level","type":"exact"},{"name":"decreased sensitivity of positive regulation of transcription from RNA polymerase II promoter by pheromones to pheromone","type":"related"},{"name":"decreased transcriptional response to pheromone","type":"related"},{"name":"reduced transcriptional response to pheromone at normal pheromone level","type":"exact"},{"name":"resistant to pheromone","type":"related"}],"termid":"FYPO:0000987"}


id: PBO:0044975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box helicase 15","termid":"PBO:0044975"}


id: PBO:0114834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lectin and fungal killer toxin kp4-like domain, cysteine-rich, possibly secreted Mug117","termid":"PBO:0114834"}


id: PBO:0083198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene LDB7/YBL006C","termid":"PBO:0083198"}


id: PBO:0030814
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_isocitrate_dehydrogenase_(NAD+)_activity","termid":"PBO:0030814"}


id: GO:0030916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process resulting in the transition of the otic placode into the otic vesicle, a transient embryonic structure formed during development of the vertebrate inner ear.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial tube formation","termid":"GO:0072175"},{"relation_name":"part_of","term_name":"otic vesicle morphogenesis","termid":"GO:0071600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"otic vesicle formation","synonyms":[{"name":"otocyst biosynthesis","type":"exact"},{"name":"otocyst formation","type":"exact"}],"termid":"GO:0030916"}


id: GO:0042972
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-beta-D-glucosidic linkages in beta-D-glucans containing (1->3) and (1->4) bonds.","definition_xrefs":["EC:3.2.1.73"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"licheninase activity","secondary_identifiers":["MetaCyc:3.2.1.73-RXN"],"synonyms":[{"name":"1,3-1,4-beta-D-glucan 4-glucanohydrolase activity","type":"exact"},{"name":"1,3-1,4-beta-glucan 4-glucanohydrolase activity","type":"exact"},{"name":"1,3;1,4-beta-glucan 4-glucanohydrolase activity","type":"related"},{"name":"1,3;1,4-beta-glucan endohydrolase activity","type":"related"},{"name":"beta-(1->3), (1->4)-D-glucan 4-glucanohydrolase activity","type":"related"},{"name":"beta-glucanase activity","type":"broad"},{"name":"endo-beta-1,3-1,4 glucanase activity","type":"related"},{"name":"lichenase activity","type":"exact"},{"name":"mixed linkage beta-glucanase activity","type":"related"}],"termid":"GO:0042972"}


id: PBO:0080146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vav guanine nucleotide exchange factor 2","termid":"PBO:0080146"}


id: PBO:0080343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 107 pseudogene","termid":"PBO:0080343"}


id: PBO:0039087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiotensin II receptor type 1","termid":"PBO:0039087"}


id: PBO:0056461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBL associated serine protease 1","termid":"PBO:0056461"}


id: GO:0102723
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + curcumin = curcumin monoglucoside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose:curcumin glucosyltransferase activity (obsolete GO:0102723)","termid":"GO:0102723"}


id: GO:0032126
data:
  {"annotated_genes":["SJAG_02087","SJAG_02989","SJAG_02338","SJAG_02707","SJAG_02626","SJAG_04227"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96394,98478,103372,117344,117653],"is_not":false,"summary":null,"term":"GO:0032126"},{"annotations":[91384,117654],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036286"}]},"cv_name":"cellular_component","definition":"A cell part that is composed of the eisosome membrane or MCC domain, a furrow-like plasma membrane sub-domain and associated integral transmembrane proteins, and the proteins (eisosome filaments) that form a scaffolding lattice on the cytoplasmic face. Eisosomes broadly affect overall plasma membrane organization.","definition_xrefs":["PMID:22368779","GOC:al","GOC:vw","PMID:16496001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02087":null,"SJAG_02338":null,"SJAG_02626":null,"SJAG_02707":null,"SJAG_02989":null,"SJAG_04227":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"eisosome","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Eisosome"],"termid":"GO:0032126","terms_by_termid":{"GO:0032126":null,"GO:0036286":null}}


id: PR:O94236
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 3 subunit D that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12399:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit D (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC637.07","secondary_identifiers":["UniProtKB:O94236"],"synonyms":[{"name":"SPAC637.07","type":"related"},{"name":"Spom972h-EIF3D","type":"exact"},{"name":"eIF3d (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eif3d","type":"related"},{"name":"microtubule-destabilizing protein moe1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94236"}


id: GO:0006125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_electron_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete thioredoxin pathway (obsolete GO:0006125)","synonyms":[{"name":"thioredoxin pathway","type":"exact"},{"name":"thioredoxin reduction","type":"narrow"}],"termid":"GO:0006125"}


id: MONDO:0859139
data:
  {"annotated_genes":["SJAG_04755","SJAG_05313"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86068,86069],"is_not":false,"summary":null,"term":"MONDO:0859139"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"is_obsolete":false,"name":"blepharophimosis-impaired intellectual development syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619293","MEDGEN:1779966","UMLS:C5443984","DOID:0081442","Orphanet:637013"],"synonyms":[{"name":"SMARCA2-related blepharophimosis-intellectual disability syndrome","type":"exact"}],"termid":"MONDO:0859139","terms_by_termid":{"MONDO:0859139":null},"xrefs":{"Monarch":{"xref_id":"0859139"}}}


id: PBO:0030440
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_tRNA_modification","termid":"PBO:0030440"}


id: PBO:0015676
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of MEi2","termid":"PBO:0015676"}


id: GO:0010132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dhurrin, a cyanogenic glucoside which functions as a plant defense compound.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyanogenic glycoside biosynthetic process","termid":"GO:0019756"},{"relation_name":"is_a","term_name":"beta-glucoside biosynthetic process","termid":"GO:1901806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"dhurrin biosynthetic process","secondary_identifiers":["MetaCyc:PWY-861"],"synonyms":[{"name":"dhurrin anabolism","type":"exact"},{"name":"dhurrin biosynthesis","type":"exact"},{"name":"dhurrin formation","type":"exact"},{"name":"dhurrin synthesis","type":"exact"}],"termid":"GO:0010132"}


id: PBO:0062574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily D member 3","termid":"PBO:0062574"}


id: PBO:0065846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11A, member RAS oncogene family pseudogene 2","termid":"PBO:0065846"}


id: GO:0052844
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-diphospho-1D-myo-inositol 1,2,4,5,6-pentakisphosphate + H2O = 1D-myo-inositol 1,2,3,4,5,6-hexakisphosphate + phosphate + 2 H+.","definition_xrefs":["PMID:11502751","PMID:10827188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol diphosphate pentakisphosphate diphosphatase activity","termid":"GO:0052842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"inositol-3-diphosphate-1,2,4,5,6-pentakisphosphate diphosphatase activity","secondary_identifiers":["MetaCyc:RXN-10978"],"termid":"GO:0052844"}


id: MONDO:0016869
data:
  {"annotated_genes":["SJAG_01806"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008684"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"},{"relation_name":"is_a","term_name":"chromosome 4 disorder","termid":"MONDO:0700011"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01806":null},"genotype_count":0,"is_obsolete":false,"name":"partial deletion of chromosome 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:261781","UMLS:C5679648","GARD:20792","MEDGEN:1825958"],"synonyms":[{"name":"partial deletion of chromosome type 4","type":"exact"},{"name":"partial monosomy of chromosome 4","type":"exact"}],"termid":"MONDO:0016869","terms_by_termid":{"MONDO:0008684":null},"xrefs":{"Monarch":{"xref_id":"0016869"}}}


id: GO:0097248
data:
  {"annotated_genes":["SJAG_01017","SJAG_00661","SJAG_00030","SJAG_01738"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93507,99670,104148,110353],"is_not":false,"summary":null,"term":"GO:0097248"}]},"cv_name":"biological_process","definition":"A process in which a protein or protein complex is maintained in a specific location in the cell cortex of a cell tip, and is prevented from moving elsewhere. The cell cortex of a cell tip is the region directly beneath the plasma membrane at either end of the longest axis of a cylindrical or elongated cell.","definition_xrefs":["PMID:19646873","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein location in cell cortex","termid":"GO:0032065"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00661":null,"SJAG_01017":null,"SJAG_01738":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of protein location in cell cortex of cell tip","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097248","terms_by_termid":{"GO:0097248":null}}


id: GO:0050979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a mechanical stimulus relating to a magnetic field, convert it to a molecular signal, and recognize and characterize the signal. A magnetic field exerts a torque on a ferromagnetic material (e.g. magnetite) or on a material with diamagnetic anisotropy; organisms that can detect this torque can use it to determine the orientation of the magnetic field.","definition_xrefs":["Wikipedia:Magnetoception","PMID:15886990","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of mechanical stimulus","termid":"GO:0050954"},{"relation_name":"is_a","term_name":"magnetoreception","termid":"GO:0050958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"magnetoreception by sensory perception of mechanical stimulus","synonyms":[{"name":"magnetoreception through mechanical stimulus","type":"exact"},{"name":"magnetoreception, sensory perception of mechanical stimulus","type":"exact"},{"name":"magnetoreception, using mechanical stimulus","type":"exact"}],"termid":"GO:0050979"}


id: GO:0030135
data:
  {"annotated_genes":["SJAG_01991","SJAG_00104","SJAG_01167","SJAG_04565","SJAG_04474","SJAG_00557","SJAG_05345","SJAG_00192","SJAG_03558","SJAG_00669","SJAG_04070","SJAG_03270","SJAG_01642","SJAG_03907","SJAG_02120","SJAG_00108","SJAG_01939","SJAG_04569","SJAG_02805","SJAG_01927","SJAG_04592","SJAG_02234","SJAG_01428","SJAG_04002","SJAG_02160","SJAG_00379","SJAG_02282","SJAG_04644","SJAG_02453","SJAG_04402","SJAG_01809","SJAG_03368","SJAG_05344","SJAG_02839","SJAG_00916","SJAG_04517","SJAG_02264","SJAG_00357","SJAG_00800","SJAG_01285","SJAG_04598","SJAG_04112","SJAG_05013","SJAG_04023","SJAG_01748","SJAG_01025","SJAG_01600","SJAG_02349","SJAG_00152","SJAG_00785","SJAG_04609","SJAG_03933","SJAG_02539","SJAG_04196","SJAG_02482","SJAG_03153","SJAG_00284","SJAG_04391","SJAG_00767","SJAG_01508","SJAG_00072","SJAG_04740","SJAG_02240","SJAG_00906","SJAG_02177","SJAG_01633","SJAG_03404","SJAG_04513","SJAG_02789"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100622,112488,112273,118379],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[111082,95752,107816,111141],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"},{"annotations":[112397,94375],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[117989,114374],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030125"},{"annotations":[105206,98816,100550,105510,91689,99831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030136"},{"annotations":[88379,93670],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030665"},{"annotations":[97951,106611,98040,102767,103619,116899,113244,92706,115868],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030126"},{"annotations":[99018,92620,91091,113631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030137"},{"annotations":[97251,95536],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030663"},{"annotations":[70930,94996,92839,106054,74658,108213,109697,112204,116087,111466],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030127"},{"annotations":[116457,95575,107905,93870,115101,92621,102768,93743,115835,89749,113821,116012,118297,95097,110231,103775,106793,91010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030134"},{"annotations":[113686,95034,109291,100574,107511],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0012507"},{"annotations":[108282,99408],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034044"},{"annotations":[99684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030140"}]},"cv_name":"cellular_component","definition":"Small membrane-bounded organelle formed by pinching off of a coated region of membrane. Some coats are made of clathrin, whereas others are made from other proteins.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":69,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00104":null,"SJAG_00108":null,"SJAG_00152":null,"SJAG_00192":null,"SJAG_00284":null,"SJAG_00357":null,"SJAG_00379":null,"SJAG_00557":null,"SJAG_00669":null,"SJAG_00767":null,"SJAG_00785":null,"SJAG_00800":null,"SJAG_00906":null,"SJAG_00916":null,"SJAG_01025":null,"SJAG_01167":null,"SJAG_01285":null,"SJAG_01428":null,"SJAG_01508":null,"SJAG_01600":null,"SJAG_01633":null,"SJAG_01642":null,"SJAG_01748":null,"SJAG_01809":null,"SJAG_01927":null,"SJAG_01939":null,"SJAG_01991":null,"SJAG_02120":null,"SJAG_02160":null,"SJAG_02177":null,"SJAG_02234":null,"SJAG_02240":null,"SJAG_02264":null,"SJAG_02282":null,"SJAG_02349":null,"SJAG_02453":null,"SJAG_02482":null,"SJAG_02539":null,"SJAG_02789":null,"SJAG_02805":null,"SJAG_02839":null,"SJAG_03153":null,"SJAG_03270":null,"SJAG_03368":null,"SJAG_03404":null,"SJAG_03558":null,"SJAG_03907":null,"SJAG_03933":null,"SJAG_04002":null,"SJAG_04023":null,"SJAG_04070":null,"SJAG_04112":null,"SJAG_04196":null,"SJAG_04391":null,"SJAG_04402":null,"SJAG_04474":null,"SJAG_04513":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04569":null,"SJAG_04592":null,"SJAG_04598":null,"SJAG_04609":null,"SJAG_04644":null,"SJAG_04740":null,"SJAG_05013":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"coated vesicle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0005909","NIF_Subcellular:sao1985096626"],"termid":"GO:0030135","terms_by_termid":{"GO:0012507":null,"GO:0030121":null,"GO:0030122":null,"GO:0030125":null,"GO:0030126":null,"GO:0030127":null,"GO:0030130":null,"GO:0030134":null,"GO:0030136":null,"GO:0030137":null,"GO:0030140":null,"GO:0030663":null,"GO:0030665":null,"GO:0034044":null}}


id: PBO:0086594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression induced by heat and by calcium shortage; in many strains, YML002W is continuous with YML003W, and is predicted to encode a single protein of 1090 aa with a full-length VPS9 domain; in strains S288C, W303, and CEN.PK, a single thymine residue is deleted near the 3' end of YML003W at ChrXIII:264337, causing a frameshift and premature stop codon, truncating YML003W","termid":"PBO:0086594"}


id: PBO:0063352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"procollagen C-endopeptidase enhancer","termid":"PBO:0063352"}


id: GO:0009555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pollen grain over time, from its formation to the mature structure. The process begins with the meiosis of the microsporocyte to form four haploid microspores. The nucleus of each microspore then divides by mitosis to form a two-celled organism, the pollen grain, that contains a tube cell as well as a smaller generative cell. The pollen grain is surrounded by an elaborate cell wall. In some species, the generative cell immediately divides again to give a pair of sperm cells. In most flowering plants, however this division takes place later, in the tube that develops when a pollen grain germinates.","definition_xrefs":["GOC:mtg_plant","GOC:mtg_sensu","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gametophyte development","termid":"GO:0048229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen development","secondary_identifiers":["GO:0048231","GO:0009564"],"synonyms":[{"name":"formation of generative and vegetative cells","type":"exact"},{"name":"male gametophyte development","type":"exact"},{"name":"male gametophyte formation","type":"exact"},{"name":"microgametophyte development","type":"exact"},{"name":"pollen grain formation","type":"exact"}],"termid":"GO:0009555"}


id: PBO:0078021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 11","termid":"PBO:0078021"}


id: PATO:0000431
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000431 odor value (obsolete PATO:0000431)","termid":"PATO:0000431"}


id: GO:0052319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of phytoalexin biosynthesis, the chemical reactions and pathways resulting in the formation of phytoalexins.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phytoalexin biosynthetic process (obsolete GO:0052319)","synonyms":[{"name":"regulation of phytoalexin biosynthesis","type":"exact"}],"termid":"GO:0052319"}


id: PBO:0050689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 16","termid":"PBO:0050689"}


id: GO:0106387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of guanosine 5'-monophosphate (GMP) through an inosine 5'-monophosphate (IMP) intermediate.","definition_xrefs":["PMID:25605736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GMP biosynthetic process","termid":"GO:0006177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"'de novo' GMP biosynthetic process","synonyms":[{"name":"'de novo' guanosine 5'-monophosphate biosynthetic process","type":"exact"}],"termid":"GO:0106387"}


id: PBO:0066286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member K, pseudogene","termid":"PBO:0066286"}


id: PBO:0000276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF hand","termid":"PBO:0000276"}


id: PBO:0061751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal tyrosine phosphorylated phosphoinositide-3-kinase adaptor 1","termid":"PBO:0061751"}


id: PBO:0041571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 20 open reading frame 202","termid":"PBO:0041571"}


id: GO:0015591
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of D-ribose from one side of a membrane to the other. As beta-D-ribofuranose, D-ribose forms the glycose group of all ribonucleosides, ribonucleotides and ribonucleic acids, and also of ribose phosphates, various glycosides, some coenzymes and some forms of vitamin B12.","definition_xrefs":["ISBN:0815340729","ISBN:0198506732","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose transmembrane transporter activity","termid":"GO:0015146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"D-ribose transmembrane transporter activity","termid":"GO:0015591"}


id: PBO:0050986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 70A","termid":"PBO:0050986"}


id: SO:0002219
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant in which the function of a gene product is retained with respect to a reference.","direct_ancestors":[{"relation_name":"is_a","term_name":"functional_effect_variant","termid":"SO:0001536"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally_normal","synonyms":[{"name":"function retained variant","type":"exact"},{"name":"function_retained_variant","type":"related"},{"name":"functionally normal","type":"related"}],"termid":"SO:0002219"}


id: PBO:0080265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 28 pseudogene","termid":"PBO:0080265"}


id: PR:Q09718
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An AP-2 complex subunit mu that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00157","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 complex subunit mu (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.09c","secondary_identifiers":["UniProtKB:Q09718"],"synonyms":[{"name":"Mu2-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-AP2M1","type":"exact"},{"name":"clathrin assembly protein complex 2 mu medium chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin coat assembly protein AP50 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin coat-associated protein AP50 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"plasma membrane adaptor AP-2 50 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09718"}


id: PBO:0069825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1111, pseudogene","termid":"PBO:0069825"}


id: PBO:0091201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn","termid":"PBO:0091201"}


id: PBO:0083652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endonuclease involved in DNA recombination and repair; subunit of a complex, with Slx4p, that hydrolyzes 5' branches from duplex DNA in response to stalled or converging replication forks; function overlaps with that of Sgs1p-Top3p","termid":"PBO:0083652"}


id: GO:0019363
data:
  {"annotated_genes":["SJAG_03946","SJAG_01582","SJAG_01359","SJAG_01500","SJAG_04467","SJAG_00957","SJAG_04693","SJAG_02618","SJAG_03298","SJAG_02889","SJAG_01566"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90555,112583,90132,98843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034356"},{"annotations":[116797,99561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[88495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[96966,95943,91404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006741"},{"annotations":[88496,109111,90133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019358"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base.","definition_xrefs":["GOC:vw","GOC:jl","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"pyridine nucleotide metabolic process","termid":"GO:0019362"},{"relation_name":"is_a","term_name":"pyridine-containing compound biosynthetic process","termid":"GO:0072525"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01359":null,"SJAG_01500":null,"SJAG_01566":null,"SJAG_01582":null,"SJAG_02618":null,"SJAG_02889":null,"SJAG_03298":null,"SJAG_03946":null,"SJAG_04467":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyridine nucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PYRIDNUCSYN-PWY"],"synonyms":[{"name":"pyridine nucleotide anabolism","type":"exact"},{"name":"pyridine nucleotide biosynthesis","type":"exact"},{"name":"pyridine nucleotide formation","type":"exact"},{"name":"pyridine nucleotide synthesis","type":"exact"}],"termid":"GO:0019363","terms_by_termid":{"GO:0006741":null,"GO:0009435":null,"GO:0019358":null,"GO:0034355":null,"GO:0034356":null}}


id: PBO:0062230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily B member 3","termid":"PBO:0062230"}


id: PBO:0042321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD40 ligand","termid":"PBO:0042321"}


id: GO:0097378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a dorsal spinal cord interneuron is directed to a specific target site in response to a combination of attractive and repulsive cues. A dorsal spinal cord interneuron is an interneuron located in the dorsal part of the spinal cord.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal cord interneuron axon guidance","termid":"GO:0097377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal spinal cord interneuron axon guidance","synonyms":[{"name":"dorsal interneuron axon guidance","type":"exact"}],"termid":"GO:0097378"}


id: PBO:0075848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ssu-2 homolog","termid":"PBO:0075848"}


id: PATO:0000923
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000923 relative width (obsolete PATO:0000923)","termid":"PATO:0000923"}


id: GO:0003200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where an endocardial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell that will contribute to the formation of the heart septum.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocardial cushion to mesenchymal transition","termid":"GO:0090500"},{"relation_name":"part_of","term_name":"cardiac septum morphogenesis","termid":"GO:0060411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cushion to mesenchymal transition involved in heart chamber septation","termid":"GO:0003200"}


id: MONDO:0018907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, partly cystic, epithelial tumor of the sellar region, presumably derived from Rathke pouch epithelium. It affects mainly children and young adults. There are two clinicopathological forms: adamantinomatous craniopharyngioma and papillary craniopharyngioma. The most significant factor associated with recurrence is the extent of surgical resection, with lesions greater than 5 cm in diameter carrying a markedly worse prognosis. (Adapted from WHO)","definition_xrefs":["NCIT:C2964"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary endocrine growth disease","termid":"MONDO:0015514"},{"relation_name":"is_a","term_name":"central nervous system organ benign neoplasm","termid":"MONDO:0000628"},{"relation_name":"is_a","term_name":"bone benign neoplasm","termid":"MONDO:0000631"},{"relation_name":"is_a","term_name":"squamous cell neoplasm","termid":"MONDO:0002532"},{"relation_name":"is_a","term_name":"sella turcica neoplasm","termid":"MONDO:0002720"},{"relation_name":"is_a","term_name":"disorder of facial skeleton","termid":"MONDO:0023369"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniopharyngioma","secondary_identifiers":["EFO:1000209","ICDO:9350/1","MEDGEN:41339","NANDO:2200091","NORD:1996","MESH:D003397","SCTID:189179009","UMLS:C0010276","Orphanet:54595","DOID:3840","GARD:10486","ICD9:237.0","MedDRA:10011318"],"synonyms":[{"name":"Adamantinomatous tumor","type":"related"},{"name":"Adamantinomatous tumour","type":"related"},{"name":"Dysodontogenic epithelial tumor","type":"related"},{"name":"Dysodontogenic epithelial tumour","type":"related"},{"name":"Rathke pouch neoplasm","type":"exact"},{"name":"Rathke pouch tumor","type":"exact"},{"name":"Rathke pouch tumour","type":"exact"},{"name":"Rathke's pouch neoplasm","type":"exact"},{"name":"Rathke's pouch tumor","type":"exact"},{"name":"Rathke's pouch tumour","type":"exact"},{"name":"craniopharyngeal duct tumor","type":"related"},{"name":"craniopharyngeal duct tumour","type":"related"},{"name":"craniopharyngioma (WHO grade I)","type":"exact"},{"name":"craniopharyngioma (morphologic abnormality)","type":"exact"},{"name":"craniopharyngioma, benign","type":"exact"},{"name":"cystoma","type":"related"},{"name":"neoplasm of Rathke's pouch","type":"exact"},{"name":"tumor of Rathke's pouch","type":"exact"},{"name":"tumour of Rathke's pouch","type":"exact"}],"termid":"MONDO:0018907","xrefs":{"Monarch":{"xref_id":"0018907"}}}


id: PBO:0070065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 22, pseudogene","termid":"PBO:0070065"}


id: PBO:0000428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA Z3","termid":"PBO:0000428"}


id: GO:0017105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an 11,12-saturated fatty acyl-CoA + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = an (11Z)-delta-11-fatty acyl-CoA + 2 Fe(III)-[cytochrome b5] + 2 H2O.","definition_xrefs":["PMID:15063718","PMID:15544945","RHEA:25852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA desaturase activity","termid":"GO:0016215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"acyl-CoA delta11-(Z)-desaturase activity","secondary_identifiers":["MetaCyc:1.14.99.32-RXN","EC:1.14.19.5","GO:0050601"],"synonyms":[{"name":"Z/E11-desaturase","type":"broad"},{"name":"acyl-CoA D11-desaturase activity","type":"exact"},{"name":"acyl-CoA delta(11)-desaturase activity","type":"exact"},{"name":"acyl-CoA delta11-desaturase activity","type":"broad"},{"name":"delta(11) desaturase","type":"broad"},{"name":"delta(11)-fatty-acid desaturase","type":"broad"},{"name":"delta(11)-palmitoyl-CoA desaturase","type":"narrow"},{"name":"fatty acid delta(11)-desaturase","type":"broad"},{"name":"myristoyl-CoA 11-(Z) desaturase activity","type":"narrow"}],"termid":"GO:0017105"}


id: MONDO:0009366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of compensated hydrocephalus characterized clinically by a slowly progressive gait disorder (see gait disorders, neurologic), progressive intellectual decline, and urinary incontinence. Spinal fluid pressure tends to be in the high normal range. This condition may result from processes which interfere with the absorption of csf including subarachnoid hemorrhage, chronic meningitis, and other conditions. (From Adams et al., Principles of Neurology, 6th ed, pp631-3)","definition_xrefs":["MESH:D006850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"communicating hydrocephalus","termid":"MONDO:0002045"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"normal pressure hydrocephalus","secondary_identifiers":["Orphanet:314928","MedDRA:10029773","MEDGEN:42526","EFO:1001065","UMLS:C0020258","SCTID:30753002","DOID:1572","OMIM:236690","ICD9:331.5"],"synonyms":[{"name":"NPH","type":"exact"},{"name":"chronic adult hydrocephalus","type":"exact"},{"name":"hydrocephalus, normal pressure, 1","type":"exact"},{"name":"hydrocephalus, normal-pressure","type":"related"},{"name":"low pressure hydrocephalus","type":"exact"}],"termid":"MONDO:0009366","xrefs":{"Monarch":{"xref_id":"0009366"}}}


id: GO:0086002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An action potential that occurs in a cardiac muscle cell and is involved in its contraction.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell action potential","termid":"GO:0086001"},{"relation_name":"part_of","term_name":"cardiac muscle cell contraction","termid":"GO:0086003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle cell action potential involved in contraction","termid":"GO:0086002"}


id: PBO:0083965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID Complex regulatory subunit; binds GID Complex in response to glucose through interactions with complex member Vid28p; regulates fructose-1,6-bisphosphatase (FBPase) targeting to the vacuole; promotes proteasome-dependent catabolite degradation of FBPase; peripheral membrane protein located at Vid (vacuole import and degradation) vesicles","termid":"PBO:0083965"}


id: PATO:0001990
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A duration quality of a process inhering in a disease by virtue of the bearer's duration of an impairment of health or of a condition of abnormal functioning.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duration","termid":"PATO:0001309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"duration of disease","termid":"PATO:0001990"}


id: GO:0060040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a bipolar cell, the last neuron to be generated in the retina.","definition_xrefs":["GOC:bf","GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamatergic neuron differentiation","termid":"GO:1905962"},{"relation_name":"part_of","term_name":"neural retina development","termid":"GO:0003407"},{"relation_name":"part_of","term_name":"retina morphogenesis in camera-type eye","termid":"GO:0060042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal bipolar neuron differentiation","termid":"GO:0060040"}


id: GO:0004474
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + glyoxylate + H2O = (S)-malate + CoA + H+.","definition_xrefs":["RHEA:18181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"malate synthase activity","secondary_identifiers":["MetaCyc:MALSYN-RXN","EC:2.3.3.9","KEGG_REACTION:R00472"],"synonyms":[{"name":"L-malate glyoxylate-lyase (CoA-acetylating) activity","type":"related"},{"name":"acetyl-CoA:glyoxylate C-acetyltransferase (thioester-hydrolysing, carboxymethyl-forming)","type":"related"},{"name":"glyoxylate transacetase activity","type":"related"},{"name":"glyoxylate transacetylase activity","type":"related"},{"name":"glyoxylic transacetase activity","type":"related"},{"name":"malate condensing enzyme activity","type":"related"},{"name":"malate synthetase activity","type":"related"},{"name":"malic synthetase activity","type":"related"},{"name":"malic-condensing enzyme activity","type":"related"}],"termid":"GO:0004474"}


id: GO:0010883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of lipid storage. Lipid storage is the accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"lipid storage","termid":"GO:0019915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lipid storage","synonyms":[{"name":"regulation of lipid sequestration","type":"narrow"}],"termid":"GO:0010883"}


id: PBO:0052234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 9 pseudogene 2","termid":"PBO:0052234"}


id: PBO:0001307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn9","termid":"PBO:0001307"}


id: MONDO:0003121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the middle cranial fossa.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"middle cranial fossa meningioma","secondary_identifiers":["UMLS:C1334757","DOID:4749","MEDGEN:277369","NCIT:C5586"],"synonyms":[{"name":"meningioma (disease) of middle cranial fossa","type":"exact"},{"name":"meningioma of middle cranial fossa","type":"exact"},{"name":"meningioma of the middle cranial fossa","type":"exact"},{"name":"middle cranial fossa meningioma (disease)","type":"exact"}],"termid":"MONDO:0003121","xrefs":{"Monarch":{"xref_id":"0003121"}}}


id: GO:0060890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a limb epidermal spinous cell.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratinocyte differentiation","termid":"GO:0030216"},{"relation_name":"part_of","term_name":"limb epidermis development","termid":"GO:0060887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb spinous cell differentiation","termid":"GO:0060890"}


id: GO:0010642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the platelet-derived growth factor receptor signaling pathway.","definition_xrefs":["GOC:tb","GOC:hjd","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of platelet-derived growth factor receptor signaling pathway","termid":"GO:0010640"},{"relation_name":"negatively_regulates","term_name":"platelet-derived growth factor receptor signaling pathway","termid":"GO:0048008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of platelet-derived growth factor receptor signaling pathway","synonyms":[{"name":"negative regulation of platelet-derived growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0010642"}


id: PBO:0089672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Rrp5","termid":"PBO:0089672"}


id: GO:0045997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of ecdysteroids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ecdysteroid biosynthetic process","termid":"GO:0007554"},{"relation_name":"is_a","term_name":"negative regulation of ecdysteroid metabolic process","termid":"GO:0045965"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of steroid hormone biosynthetic process","termid":"GO:0090032"},{"relation_name":"negatively_regulates","term_name":"ecdysteroid biosynthetic process","termid":"GO:0045456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of ecdysteroid biosynthetic process","synonyms":[{"name":"down regulation of ecdysteroid biosynthetic process","type":"exact"},{"name":"down-regulation of ecdysteroid biosynthetic process","type":"exact"},{"name":"downregulation of ecdysteroid biosynthetic process","type":"exact"},{"name":"inhibition of ecdysteroid biosynthetic process","type":"narrow"},{"name":"negative regulation of ecdysteroid anabolism","type":"exact"},{"name":"negative regulation of ecdysteroid biosynthesis","type":"exact"},{"name":"negative regulation of ecdysteroid formation","type":"exact"},{"name":"negative regulation of ecdysteroid synthesis","type":"exact"}],"termid":"GO:0045997"}


id: PBO:0060774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B8","termid":"PBO:0060774"}


id: GO:0047551
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2-oxoaldehyde + NAD+ + H2O = a 2-oxo acid + NADH + H+.","definition_xrefs":["MetaCyc:2-OXOALDEHYDE-DEHYDROGENASE-NAD+-RXN","EC:1.2.1.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-oxoaldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["Wikipedia:2-oxoaldehyde_dehydrogenase_(NAD+)","RHEA:22276"],"synonyms":[{"name":"2-ketoaldehyde dehydrogenase","type":"broad"},{"name":"2-oxoaldehyde dehydrogenase (NAD+)","type":"related"},{"name":"2-oxoaldehyde:NAD+ 2-oxidoreductase activity","type":"related"},{"name":"NAD-dependent alpha-ketoaldehyde dehydrogenase activity","type":"related"},{"name":"NAD-linked alpha-ketoaldehyde dehydrogenase activity","type":"related"},{"name":"alpha-ketoaldehyde dehydrogenase activity","type":"broad"},{"name":"methylglyoxal dehydrogenase activity","type":"broad"}],"termid":"GO:0047551"}


id: PBO:0075815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scavenger receptor cysteine rich family member with 4 domains","termid":"PBO:0075815"}


id: PBO:0055584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3020","termid":"PBO:0055584"}


id: GO:1901855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 5,6,7,8-tetrahydrosarcinapterin.","definition_xrefs":["GOC:yaf","UniPathway:UPA00069","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid biosynthetic process","termid":"GO:0072351"},{"relation_name":"is_a","term_name":"5,6,7,8-tetrahydrosarcinapterin metabolic process","termid":"GO:1901853"},{"relation_name":"is_a","term_name":"tetrahydromethanopterin biosynthetic process","termid":"GO:2001118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0042559"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0042559","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"5,6,7,8-tetrahydrosarcinapterin biosynthetic process","synonyms":[{"name":"5,6,7,8-tetrahydrosarcinapterin anabolism","type":"exact"},{"name":"5,6,7,8-tetrahydrosarcinapterin biosynthesis","type":"exact"},{"name":"5,6,7,8-tetrahydrosarcinapterin formation","type":"exact"},{"name":"5,6,7,8-tetrahydrosarcinapterin synthesis","type":"exact"}],"termid":"GO:1901855"}


id: PBO:0065736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxidasin like","termid":"PBO:0065736"}


id: PATO:0002366
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Male quality of having complete, unaltered reproductive organs.","definition_xrefs":["PATOC:MF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male","termid":"PATO:0000384"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intact male","termid":"PATO:0002366"}


id: MONDO:0003311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neoplasms of the endometrial stroma that sometimes involve the myometrium. These tumors contain cells that may closely or remotely resemble the normal stromal cells. Endometrial stromal neoplasms are divided into three categories: (1) benign stromal nodules; (2) low-grade stromal sarcoma, or endolymphatic stromal myosis; and (3) malignant endometrial stromal sarcoma (sarcoma, endometrial stromal).","definition_xrefs":["MESH:D036821"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"endometrial cancer","termid":"MONDO:0011962"},{"relation_name":"is_a","term_name":"endometrium neoplasm","termid":"MONDO:0021251"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endometrial stromal tumor","secondary_identifiers":["MEDGEN:87280","SCTID:446887007","ICD9:239.5","EFO:1000920","UMLS:C0334695","DOID:5166"],"synonyms":[{"name":"endometrial stroma neoplasm","type":"exact"},{"name":"endometrial stroma tumor","type":"exact"},{"name":"endometrial stroma tumour","type":"exact"},{"name":"endometrial stromal neoplasm","type":"exact"},{"name":"endometrial stromal tumor","type":"exact"},{"name":"endometrial stromal tumor (morphologic abnormality)","type":"exact"},{"name":"endometrial stromal tumour (morphologic abnormality)","type":"exact"},{"name":"neoplasm of endometrial stroma","type":"exact"},{"name":"tumor of endometrial stroma","type":"exact"},{"name":"tumour of endometrial stroma","type":"exact"}],"termid":"MONDO:0003311","xrefs":{"Monarch":{"xref_id":"0003311"}}}


id: GO:0018993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of sex and sexual phenotypes in an organism's soma.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex determination","termid":"GO:0007530"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic sex determination","termid":"GO:0018993"}


id: GO:0035584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals in which a cell uses calcium ions released from an intracellular store to convert a signal into a response.","definition_xrefs":["PMID:20192754","GOC:BHF","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium-mediated signaling using intracellular calcium source (obsolete GO:0035584)","synonyms":[{"name":"calcium signaling using intracellular calcium source","type":"exact"},{"name":"calcium signalling using intracellular calcium source","type":"exact"},{"name":"calcium-mediated signalling using intracellular calcium source","type":"exact"}],"termid":"GO:0035584"}


id: GO:1903519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mammary gland involution.","definition_xrefs":["PMID:23164222","GOC:dph","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tissue remodeling","termid":"GO:0034103"},{"relation_name":"regulates","term_name":"mammary gland involution","termid":"GO:0060056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mammary gland involution","termid":"GO:1903519"}


id: MONDO:0957564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital smooth muscle hamartoma, with or without hemihypertrophy","secondary_identifiers":["OMIM:620470","UMLS:C5882676","MEDGEN:1847218"],"termid":"MONDO:0957564","xrefs":{"Monarch":{"xref_id":"0957564"}}}


id: PR:Q9URX4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gto1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URX4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized family 31 glucosidase C1039.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1039.11c","synonyms":[{"name":"Spom972h-gto1","type":"exact"}],"termid":"PR:Q9URX4"}


id: PBO:0060624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCK associated protein 1 like","termid":"PBO:0060624"}


id: FYPO:0004761
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone exchange occurs to a greater extent than normal in regions of pericentric heterochromatin. Histone exchange is replacement, within chromatin, of resident histones or histone subunits with alternative, sometimes variant, histones or subunits.","definition_xrefs":["PMID:24095277","GO:0005721","GO:0043486","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"},{"relation_name":"is_a","term_name":"increased protein exchange at pericentric heterochromatin","termid":"FYPO:0006360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased histone exchange at pericentric heterochromatin","synonyms":[{"name":"increased histone exchange at dh repeat","type":"narrow"},{"name":"increased histone exchange at pericentric heterochromatin during mitotic cell cycle","type":"related"},{"name":"increased histone exchange at pericentric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0004761"}


id: PBO:0090003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific serine/threonine rich protein","termid":"PBO:0090003"}


id: PBO:0045010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIO3 opposite strand upstream RNA","termid":"PBO:0045010"}


id: PBO:0028861
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_micafungin","termid":"PBO:0028861"}


id: GO:0040018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size.","definition_xrefs":["GOC:tb","GOC:go_curators","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organism growth","termid":"GO:0040014"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"multicellular organism growth","termid":"GO:0035264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of multicellular organism growth","synonyms":[{"name":"positive regulation of body growth","type":"exact"},{"name":"positive regulation of body size","type":"exact"}],"termid":"GO:0040018"}


id: PBO:0002838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF4A (predicted)","termid":"PBO:0002838"}


id: GO:0035808
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that initiates the formation of double-strand breaks (DSBs) required for meiotic recombination. Consists of a protein that catalyses formation of the double-strand breaks (Spo11 in S. cerevisiae and Rec12 in S. pombe), and a number of accessory proteins.","definition_xrefs":["PMID:20364342","GOC:vw","PMID:12897161","PMID:21429938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"condensed nuclear chromosome","termid":"GO:0000794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634","GO:0005694"],"is_obsolete":false,"name":"meiotic recombination initiation complex","termid":"GO:0035808"}


id: MOD:01291
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00464. Remap to MOD:00464.","definition_xrefs":["Unimod:425","PubMed:12643539","PubMed:12686488","PubMed:6273432","PubMed:9252331"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01291 dihydroxylated residue - site W (obsolete MOD:01291)","synonyms":[{"name":"Dioxidation","type":"related"},{"name":"dihydroxy","type":"related"}],"termid":"MOD:01291"}


id: PBO:0031883
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae RBL2","termid":"PBO:0031883"}


id: GO:0046118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 7-methylguanosine, a modified nucleoside that forms a cap at the 5'-terminus of eukaryotic mRNA.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"7-methylguanosine metabolic process","termid":"GO:0008618"},{"relation_name":"is_a","term_name":"guanosine-containing compound biosynthetic process","termid":"GO:1901070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"7-methylguanosine biosynthetic process","synonyms":[{"name":"7-methylguanosine anabolism","type":"exact"},{"name":"7-methylguanosine biosynthesis","type":"exact"},{"name":"7-methylguanosine formation","type":"exact"},{"name":"7-methylguanosine synthesis","type":"exact"}],"termid":"GO:0046118"}


id: PBO:0075183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPF divergent transcript","termid":"PBO:0075183"}


id: PBO:0030791
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_spheroid_vegetative_cell","termid":"PBO:0030791"}


id: PBO:0038523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily G member 2 (Junior blood group)","termid":"PBO:0038523"}


id: MOD:00714
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to a methylated glycine, such as N-methylglycine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated glycine","synonyms":[{"name":"MeGly","type":"exact"}],"termid":"MOD:00714"}


id: MONDO:0800469
data:
  {"annotated_genes":["SJAG_01378"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014690"}]},"cv_name":"mondo","definition":"A complex set of inherited conditions caused by a pathogenic variant(s) in the ACD gene that results in aberrant telomere biology.","definition_xrefs":["PMID:20301779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"telomere syndrome","termid":"MONDO:0100137"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01378":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"ACD-related telomere biology disorder","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"ACD-related telomeropathy","type":"exact"}],"termid":"MONDO:0800469","terms_by_termid":{"MONDO:0014690":null},"xrefs":{"Monarch":{"xref_id":"0800469"}}}


id: GO:0036216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stem cell factor (SCF) stimulus.","definition_xrefs":["GOC:uh","PMID:18787413","PMID:7520444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stem cell factor","termid":"GO:0036215"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to stem cell factor stimulus","synonyms":[{"name":"cellular response to KIT ligand","type":"exact"},{"name":"cellular response to KITLG","type":"exact"},{"name":"cellular response to SCF","type":"exact"},{"name":"cellular response to hematopoietic growth factor KL","type":"exact"}],"termid":"GO:0036216"}


id: GO:0015100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of vanadium (V) ions from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transmembrane transporter activity","termid":"GO:0046915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"vanadium ion transmembrane transporter activity","termid":"GO:0015100"}


id: PBO:0046044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit C","termid":"PBO:0046044"}


id: PBO:0048544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guided entry of tail-anchored proteins factor 4","termid":"PBO:0048544"}


id: PBO:0017519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8 activating enzyme E1-type Uba3","termid":"PBO:0017519"}


id: RO:HOM0000011
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that involves genes that diverged after a duplication event.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_paralogy_relationship_with","synonyms":[{"name":"paralogous to","type":"exact"}],"termid":"RO:HOM0000011"}


id: GO:0004915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-6 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-6 receptor activity","synonyms":[{"name":"IL-6 receptor activity","type":"exact"},{"name":"IL-6R","type":"exact"},{"name":"gp130","type":"related"}],"termid":"GO:0004915"}


id: PBO:0054275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1665","termid":"PBO:0054275"}


id: PBO:0077870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPM4 pseudogene 1","termid":"PBO:0077870"}


id: GO:0033145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the activity of any intracellular steroid hormone receptor signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033143"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"nuclear receptor-mediated steroid hormone signaling pathway","termid":"GO:0030518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of intracellular steroid hormone receptor signaling pathway","synonyms":[{"name":"positive regulation of steroid hormone receptor signaling pathway","type":"broad"},{"name":"positive regulation of steroid hormone receptor signalling pathway","type":"broad"}],"termid":"GO:0033145"}


id: PBO:0029046
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_sodium_import","termid":"PBO:0029046"}


id: GO:0006932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The translocation of the cell body forward during cell migration, mediated by tractional force on its substrate and tension in the cortical cytoskeleton. Adhesions transmit propulsive forces and serve as traction points over which the cell moves.","definition_xrefs":["ISBN:0815316194","PMID:11944043","PMID:14657486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic actin-based contraction involved in cell motility","termid":"GO:0060327"},{"relation_name":"part_of","term_name":"ameboidal-type cell migration","termid":"GO:0001667"},{"relation_name":"part_of","term_name":"substrate-dependent cell migration","termid":"GO:0006929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"substrate-dependent cell migration, cell contraction","synonyms":[{"name":"substrate-bound cell migration, cell contraction","type":"exact"}],"termid":"GO:0006932"}


id: GO:1904862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an inhibitory synapse.","definition_xrefs":["GO_REF:0000079","GOC:PARL","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse assembly","termid":"GO:0007416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"inhibitory synapse assembly","synonyms":[{"name":"inhibitory synapse formation","type":"exact"}],"termid":"GO:1904862"}


id: PBO:0001184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Pom34","termid":"PBO:0001184"}


id: GO:0015373
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: monoatomic anion(out) + Na+(out) = monoatomic anion(in) + Na+(in).","definition_xrefs":["TC:2.A.21.5.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion:monoatomic cation symporter activity","termid":"GO:0015296"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"monoatomic anion:sodium symporter activity","synonyms":[{"name":"anion:sodium symporter activity","type":"broad"},{"name":"monovalent anion:sodium symporter activity","type":"related"}],"termid":"GO:0015373"}


id: GO:0031317
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex consisting of two membrane proteins and one extracytoplasmic solute receptor. Such transporters transport a variety of substrates without direct ATP power, instead using energy from ion gradients.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter complex","termid":"GO:1990351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"tripartite ATP-independent periplasmic transporter complex","synonyms":[{"name":"TRAP transporter complex","type":"exact"},{"name":"TRAP-T transporter complex","type":"exact"}],"termid":"GO:0031317"}


id: PBO:0045375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate mannosyltransferase subunit 1, catalytic","termid":"PBO:0045375"}


id: MONDO:0011798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoprebetalipoproteinemia, acanthocytosis, retinitis pigmentosa, and pallidal degeneration","secondary_identifiers":["UMLS:C1846582","MEDGEN:337612","MESH:C564603","OMIM:607236","Orphanet:157855"],"synonyms":[{"name":"harp syndrome","type":"related"},{"name":"hypoprebetalipoproteinemia, acanthocytosis, retinitis pigmentosa, and pallidal degeneration","type":"exact"}],"termid":"MONDO:0011798","xrefs":{"Monarch":{"xref_id":"0011798"}}}


id: GO:0050939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of early stripe melanocyte differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of melanocyte differentiation","termid":"GO:0045634"},{"relation_name":"regulates","term_name":"early stripe melanocyte differentiation","termid":"GO:0050933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of early stripe melanocyte differentiation","synonyms":[{"name":"regulation of early stripe melanophore differentiation","type":"exact"}],"termid":"GO:0050939"}


id: PBO:0081016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB47 and NKTR antisense RNA 1","termid":"PBO:0081016"}


id: FYPO:0000899
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule cytoskeleton organization is normal (i.e. indistinguishable from wild type). Microtubule cytoskeleton organization is the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins.","definition_xrefs":["PomBase:mah","GO:0000226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal microtubule cytoskeleton organization during vegetative growth","synonyms":[{"name":"normal microtubule cytoskeleton organisation during vegetative growth","type":"exact"},{"name":"normal microtubule cytoskeleton organization during mitotic cell cycle","type":"related"},{"name":"normal microtubule dynamics during vegetative growth","type":"exact"},{"name":"normal microtubule organization during vegetative growth","type":"related"}],"termid":"FYPO:0000899"}


id: PBO:0076431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 11 like 7","termid":"PBO:0076431"}


id: GO:0008097
data:
  {"annotated_genes":["SJAG_00323","SJAG_01568","SJAG_04066","SJAG_00067"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88397,92850,96975,96976,101989,101990],"is_not":false,"summary":null,"term":"GO:0008097"}]},"cv_name":"molecular_function","definition":"Binding to a 5S ribosomal RNA, the smallest RNA constituent of a ribosome.","definition_xrefs":["ISBN:0321000382","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA binding","termid":"GO:0019843"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00067":null,"SJAG_00323":null,"SJAG_01568":null,"SJAG_04066":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"5S rRNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0008097","terms_by_termid":{"GO:0008097":null}}


id: PBO:0003355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SR protein-specific kinase Dsk1","termid":"PBO:0003355"}


id: GO:0044315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which proteins are transferred into the extracellular milieu or directly into host cells, via the type VII protein secretion system.","definition_xrefs":["PMID:17922044","PMID:19876390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"protein transmembrane transport","termid":"GO:0071806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"protein secretion by the type VII secretion system","termid":"GO:0044315"}


id: GO:0009855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of an organism's body plan or part of an organism with respect to a single longitudinal plane. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of symmetry","termid":"GO:0009799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of bilateral symmetry","synonyms":[{"name":"determination of bilateral asymmetry","type":"exact"}],"termid":"GO:0009855"}


id: GO:0047662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4(or 2)-aminobenzoate = aniline + CO2.","definition_xrefs":["MetaCyc:AMINOBENZOATE-DECARBOXYLASE-RXN","EC:4.1.1.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"aminobenzoate decarboxylase activity","secondary_identifiers":["RHEA:24200"],"synonyms":[{"name":"aminobenzoate carboxy-lyase (aniline-forming)","type":"related"},{"name":"aminobenzoate carboxy-lyase activity","type":"related"}],"termid":"GO:0047662"}


id: GO:0034020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-violaxanthin = all-trans-neoxanthin.","definition_xrefs":["EC:5.3.99.9","RHEA:10128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"neoxanthin synthase activity","secondary_identifiers":["MetaCyc:RXN1F-155","KEGG_REACTION:R06948"],"synonyms":[{"name":"NSY","type":"related"},{"name":"violaxanthin-neoxanthin isomerase (epoxide-opening) activity","type":"related"}],"termid":"GO:0034020"}


id: MONDO:0008120
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spinocerebellar ataxia type 7 (obsolete MONDO:0008120)","secondary_identifiers":["NANDO:1200047"],"termid":"MONDO:0008120","xrefs":{"Monarch":{"xref_id":"0008120"}}}


id: MOD:00293
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts three L-cysteine residues, an L-serine residue and a four-iron four-sulfur cluster to tris-L-cysteinyl L-serinyl tetrairon tetrasulfide.","definition_xrefs":["RESID:AA0288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-serine residue","termid":"MOD:02072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"tris-L-cysteinyl L-serinyl tetrairon tetrasulfide","synonyms":[{"name":"tetra-mu3-sulfidotris(S-cysteinyliron)(O3-serinyliron)","type":"exact"},{"name":"tris-L-cysteinyl L-serinyl tetrairon tetrasulfide","type":"exact"}],"termid":"MOD:00293"}


id: PBO:0018158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-galactose transmembrane transporter Gms1","termid":"PBO:0018158"}


id: PBO:0047264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 245 member A","termid":"PBO:0047264"}


id: GO:1901754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of vitamin D3.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D catabolic process","termid":"GO:0042369"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"vitamin D3 metabolic process","termid":"GO:0070640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0006766","GO:0008150"],"is_obsolete":false,"name":"vitamin D3 catabolic process","synonyms":[{"name":"calciol breakdown","type":"exact"},{"name":"calciol catabolic process","type":"exact"},{"name":"calciol catabolism","type":"exact"},{"name":"calciol degradation","type":"exact"},{"name":"cholecalciferol catabolic process","type":"exact"},{"name":"cholecalciferol catabolism","type":"exact"},{"name":"vitamin D3 breakdown","type":"exact"},{"name":"vitamin D3 catabolism","type":"exact"},{"name":"vitamin D3 degradation","type":"exact"}],"termid":"GO:1901754"}


id: MONDO:0020404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital cardiovascular abnormality characterized by the presence of subvalvar left ventricular outflow tract obstruction, coarctation of the aorta, and mitral stenosis.","definition_xrefs":["NCIT:C99058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital mitral valve insufficiency and/or stenosis","termid":"MONDO:0019817"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shone complex","secondary_identifiers":["GARD:19630","ICD9:746.84","Orphanet:99063","SCTID:41371000119100","MedDRA:10066802","UMLS:C1868705","MEDGEN:501135"],"synonyms":[{"name":"shone syndrome","type":"exact"},{"name":"shone's syndrome (greater than 3 sites)","type":"exact"}],"termid":"MONDO:0020404","xrefs":{"Monarch":{"xref_id":"0020404"}}}


id: GO:0008047
data:
  {"annotated_genes":["SJAG_03268","SJAG_02765","SJAG_05694","SJAG_04498","SJAG_00289","SJAG_03085","SJAG_01386","SJAG_04428","SJAG_01000","SJAG_04614","SJAG_03699","SJAG_02666","SJAG_04462","SJAG_03695","SJAG_00990","SJAG_00837","SJAG_01270","SJAG_01746","SJAG_00666","SJAG_02379","SJAG_00071","SJAG_01401","SJAG_03748","SJAG_01048","SJAG_03618","SJAG_01142","SJAG_00142","SJAG_01184","SJAG_05017","SJAG_04522","SJAG_02845","SJAG_02332","SJAG_00864","SJAG_00424","SJAG_02390","SJAG_00318","SJAG_00028","SJAG_01526","SJAG_02625","SJAG_04013","SJAG_01605","SJAG_02199","SJAG_03858","SJAG_00467","SJAG_04733","SJAG_02231","SJAG_04853","SJAG_04020","SJAG_02012","SJAG_00939","SJAG_00092","SJAG_04968","SJAG_04502","SJAG_04190","SJAG_02520","SJAG_03751","SJAG_04080","SJAG_04950","SJAG_01600","SJAG_00591","SJAG_00296","SJAG_03340","SJAG_05212","SJAG_00991","SJAG_02026","SJAG_05219","SJAG_04484","SJAG_04938","SJAG_00551","SJAG_04509","SJAG_00369","SJAG_02277","SJAG_03021","SJAG_02232","SJAG_03793","SJAG_03045","SJAG_05252","SJAG_00333","SJAG_00686","SJAG_03809","SJAG_03957","SJAG_04400","SJAG_01076","SJAG_00526","SJAG_04890","SJAG_04943","SJAG_04776","SJAG_01823","SJAG_03090","SJAG_02057","SJAG_05346","SJAG_02539","SJAG_04200","SJAG_03371","SJAG_03153","SJAG_00457","SJAG_00078","SJAG_00095","SJAG_03681","SJAG_00439","SJAG_04074","SJAG_02278","SJAG_03353","SJAG_04724","SJAG_04765","SJAG_02920","SJAG_01114","SJAG_04638","SJAG_03453","SJAG_00824","SJAG_02785","SJAG_04179","SJAG_04140","SJAG_04666","SJAG_04682","SJAG_01051","SJAG_01011","SJAG_04548","SJAG_02982","SJAG_03338","SJAG_02444","SJAG_04211","SJAG_04910","SJAG_02638","SJAG_00236","SJAG_03655","SJAG_03936","SJAG_02605","SJAG_04391","SJAG_01411","SJAG_01857","SJAG_01213"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93036,94121,94546,95234,106210,107608,109544],"is_not":false,"summary":null,"term":"GO:0008047"},{"annotations":[90703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098744"},{"annotations":[109912,116289,102067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010698"},{"annotations":[93716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010856"},{"annotations":[91626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019912"},{"annotations":[104508,111577,108364,101124,110407,110696,112462,116570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061575"},{"annotations":[103734,114907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030337"},{"annotations":[116307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140656"},{"annotations":[108798,114762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061133"},{"annotations":[104409,89176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044692"},{"annotations":[104905,110449,96043,113743,87017,87945,108912,99170,106536,106641,106890,104555,90746,94431,92324,99836,92650,98345,111473,116634,97527,110339,94513,109600,110950,70061,92815,93660,95357,97551,107105,101952,117244,105968,92713,106343,116093,104783,110858,114494,104664,104839,92807,92649,93456,98381,94900,65135,88707,93661,94424,95588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005096"},{"annotations":[111650,90811,109382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0170008"},{"annotations":[76609,70135,78505,74812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016504"},{"annotations":[118073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019211"},{"annotations":[98694,88696,109330,116774,118406,110928,87309,115819,118286,109329,110016,111972,90793,106633,118407,98586,98587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030295"},{"annotations":[116539,115402,92408,97191,99092,114475,106072,117449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072542"},{"annotations":[88711,91915,90672,88919,99484,90673,104618,90340,110037,116775,87382,90625,117867,108760,112463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043539"},{"annotations":[97352,89442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008160"},{"annotations":[87960,92362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120230"},{"annotations":[91787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061632"},{"annotations":[95710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141106"},{"annotations":[101795,88163,88424,114441,99637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990757"},{"annotations":[116652,98074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097027"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of an enzyme.","definition_xrefs":["GOC:mah","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"},{"relation_name":"is_a","term_name":"molecular function activator activity","termid":"GO:0140677"}],"gene_count":132,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00071":null,"SJAG_00078":null,"SJAG_00092":null,"SJAG_00095":null,"SJAG_00142":null,"SJAG_00236":null,"SJAG_00289":null,"SJAG_00296":null,"SJAG_00318":null,"SJAG_00333":null,"SJAG_00369":null,"SJAG_00424":null,"SJAG_00439":null,"SJAG_00457":null,"SJAG_00467":null,"SJAG_00526":null,"SJAG_00551":null,"SJAG_00591":null,"SJAG_00666":null,"SJAG_00686":null,"SJAG_00824":null,"SJAG_00837":null,"SJAG_00864":null,"SJAG_00939":null,"SJAG_00990":null,"SJAG_00991":null,"SJAG_01000":null,"SJAG_01011":null,"SJAG_01048":null,"SJAG_01051":null,"SJAG_01076":null,"SJAG_01114":null,"SJAG_01142":null,"SJAG_01184":null,"SJAG_01213":null,"SJAG_01270":null,"SJAG_01386":null,"SJAG_01401":null,"SJAG_01411":null,"SJAG_01526":null,"SJAG_01600":null,"SJAG_01605":null,"SJAG_01746":null,"SJAG_01823":null,"SJAG_01857":null,"SJAG_02012":null,"SJAG_02026":null,"SJAG_02057":null,"SJAG_02199":null,"SJAG_02231":null,"SJAG_02232":null,"SJAG_02277":null,"SJAG_02278":null,"SJAG_02332":null,"SJAG_02379":null,"SJAG_02390":null,"SJAG_02444":null,"SJAG_02520":null,"SJAG_02539":null,"SJAG_02605":null,"SJAG_02625":null,"SJAG_02638":null,"SJAG_02666":null,"SJAG_02765":null,"SJAG_02785":null,"SJAG_02845":null,"SJAG_02920":null,"SJAG_02982":null,"SJAG_03021":null,"SJAG_03045":null,"SJAG_03085":null,"SJAG_03090":null,"SJAG_03153":null,"SJAG_03268":null,"SJAG_03338":null,"SJAG_03340":null,"SJAG_03353":null,"SJAG_03371":null,"SJAG_03453":null,"SJAG_03618":null,"SJAG_03655":null,"SJAG_03681":null,"SJAG_03695":null,"SJAG_03699":null,"SJAG_03748":null,"SJAG_03751":null,"SJAG_03793":null,"SJAG_03809":null,"SJAG_03858":null,"SJAG_03936":null,"SJAG_03957":null,"SJAG_04013":null,"SJAG_04020":null,"SJAG_04074":null,"SJAG_04080":null,"SJAG_04140":null,"SJAG_04179":null,"SJAG_04190":null,"SJAG_04200":null,"SJAG_04211":null,"SJAG_04391":null,"SJAG_04400":null,"SJAG_04428":null,"SJAG_04462":null,"SJAG_04484":null,"SJAG_04498":null,"SJAG_04502":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04548":null,"SJAG_04614":null,"SJAG_04638":null,"SJAG_04666":null,"SJAG_04682":null,"SJAG_04724":null,"SJAG_04733":null,"SJAG_04765":null,"SJAG_04776":null,"SJAG_04853":null,"SJAG_04890":null,"SJAG_04910":null,"SJAG_04938":null,"SJAG_04943":null,"SJAG_04950":null,"SJAG_04968":null,"SJAG_05017":null,"SJAG_05212":null,"SJAG_05219":null,"SJAG_05252":null,"SJAG_05346":null,"SJAG_05694":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234","GO:0140677"],"is_obsolete":false,"name":"enzyme activator activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0010577"],"synonyms":[{"name":"metalloenzyme activator activity","type":"narrow"}],"termid":"GO:0008047","terms_by_termid":{"GO:0005096":null,"GO:0008047":null,"GO:0008160":null,"GO:0010698":null,"GO:0010856":null,"GO:0016504":null,"GO:0019211":null,"GO:0019912":null,"GO:0030295":null,"GO:0030337":null,"GO:0043539":null,"GO:0044692":null,"GO:0061133":null,"GO:0061575":null,"GO:0061632":null,"GO:0072542":null,"GO:0097027":null,"GO:0098744":null,"GO:0120230":null,"GO:0140656":null,"GO:0141106":null,"GO:0170008":null,"GO:1990757":null}}


id: GO:0140242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Translation that occurs at the postsynapse.","definition_xrefs":["PMID:20427644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation at synapse","termid":"GO:0140241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"translation at postsynapse","termid":"GO:0140242"}


id: GO:0070895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transposon integration, a process in which a transposable element is incorporated into another DNA molecule.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transposon integration (obsolete GO:0070895)","synonyms":[{"name":"down regulation of transposon integration","type":"exact"},{"name":"down-regulation of transposon integration","type":"exact"},{"name":"downregulation of transposon integration","type":"exact"},{"name":"inhibition of transposon integration","type":"narrow"}],"termid":"GO:0070895"}


id: MONDO:0020409
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"univentricular heart","termid":"MONDO:0015451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"univentricular heart with single atrio-ventricular valve","secondary_identifiers":["Orphanet:99069"],"termid":"MONDO:0020409","xrefs":{"Monarch":{"xref_id":"0020409"}}}


id: MONDO:0001151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition of mild to moderate high blood pressure that has no identifiable cause.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"essential hypertension","termid":"MONDO:0001134"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign essential hypertension","secondary_identifiers":["ICD9:401.1","MEDGEN:56371","DOID:10913","SCTID:1201005","UMLS:C0155583"],"synonyms":[{"name":"benign essential hypertension","type":"exact"}],"termid":"MONDO:0001151","xrefs":{"Monarch":{"xref_id":"0001151"}}}


id: GO:0033615
data:
  {"annotated_genes":["SJAG_06135","SJAG_01503","SJAG_04450","SJAG_04899","SJAG_01838","SJAG_07008"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88521,96336,100181,109218,109636,116150],"is_not":false,"summary":null,"term":"GO:0033615"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a proton-transporting ATP synthase in the mitochondrial inner membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial respiratory chain complex assembly","termid":"GO:0033108"},{"relation_name":"is_a","term_name":"proton-transporting ATP synthase complex assembly","termid":"GO:0043461"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01503":null,"SJAG_01838":null,"SJAG_04450":null,"SJAG_04899":null,"SJAG_06135":null,"SJAG_07008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0007005","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033615","terms_by_termid":{"GO:0033615":null}}


id: PBO:0083523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF RPL12B/YDR418W","termid":"PBO:0083523"}


id: GO:0007161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a cell to the extracellular matrix via adhesion molecules that do not require the presence of calcium for the interaction.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-matrix adhesion","termid":"GO:0007160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"calcium-independent cell-matrix adhesion","synonyms":[{"name":"calcium-independent cell adhesion molecule activity","type":"related"}],"termid":"GO:0007161"}


id: PBO:0017992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 1 alpha related protein Hbs1 (predicted)","termid":"PBO:0017992"}


id: GO:0072283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the metanephric renal vesicle are generated and organized. The renal vesicle is the primordial structure of the metanephric nephron epithelium, and is formed by the condensation of mesenchymal cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal vesicle morphogenesis","termid":"GO:0072077"},{"relation_name":"part_of","term_name":"metanephric nephron morphogenesis","termid":"GO:0072273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric renal vesicle morphogenesis","termid":"GO:0072283"}


id: PATO:0001519
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of vibration, as perceived by the sense of hearing.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Sound_quality"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sound quality","termid":"PATO:0001519"}


id: PBO:0110362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC9 pseudogene 1","termid":"PBO:0110362"}


id: PBO:0043559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL5A1 antisense RNA 1","termid":"PBO:0043559"}


id: GO:0030997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent to which the two centrioles within a centrosome remain tightly paired; may be mediated by the assembly and disassembly of a proteinaceous linker.","definition_xrefs":["PMID:11076968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"part_of","term_name":"centrosome cycle","termid":"GO:0007098"},{"relation_name":"regulates","term_name":"centriole-centriole cohesion","termid":"GO:0010457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"regulation of centriole-centriole cohesion","termid":"GO:0030997"}


id: MONDO:0008772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amelogenesis imperfecta in which the cause of the disease is a mutation in the KLK4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta type 2","termid":"MONDO:0015048"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta type 2A1","secondary_identifiers":["MESH:C567146","UMLS:C2673922","OMIM:204700","MESH:C538242","MEDGEN:436039","DOID:0110057","GARD:9495"],"synonyms":[{"name":"AI2A1","type":"exact"},{"name":"KLK4 amelogenesis imperfecta","type":"exact"},{"name":"amelogenesis imperfecta caused by mutation in KLK4","type":"exact"},{"name":"amelogenesis imperfecta pigmented hypomaturation type","type":"related"},{"name":"amelogenesis imperfecta pigmented hypomaturation type 1","type":"exact"},{"name":"amelogenesis imperfecta type IIA1","type":"exact"},{"name":"amelogenesis imperfecta, hypomaturation type, IIA1","type":"related"},{"name":"amelogenesis imperfecta, pigmented hypomaturation type, 1","type":"related"},{"name":"amelogenesis imperfecta, type IIA1","type":"exact"}],"termid":"MONDO:0008772","xrefs":{"Monarch":{"xref_id":"0008772"}}}


id: PBO:0070945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a","termid":"PBO:0070945"}


id: GO:0071078
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of fibronectin bound to tissue transglutaminase, and is involved in cell adhesion.","definition_xrefs":["PMID:10684262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"fibronectin-tissue transglutaminase complex","synonyms":[{"name":"FN-TGM2 complex","type":"narrow"}],"termid":"GO:0071078"}


id: PBO:0044654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin subunit 5","termid":"PBO:0044654"}


id: GO:0120173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of actin filament bundle convergence involved in mitotic contractile ring assembly.","definition_xrefs":["GOC:vw","PMID:24798735"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of actin filament bundle convergence involved in mitotic contractile ring assembly (obsolete GO:0120173)","termid":"GO:0120173"}


id: GO:0046921
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an L-fucosyl group from GDP-beta-L-fucose to an acceptor molecule to form an alpha-(1->6) linkage.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucosyltransferase activity","termid":"GO:0008417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"alpha-(1->6)-fucosyltransferase activity","synonyms":[{"name":"alpha(1,6)-fucosyltransferase activity","type":"exact"},{"name":"alpha-(1,6)-fucosyltransferase activity","type":"exact"},{"name":"alpha-1,6-fucosyltransferase activity","type":"exact"}],"termid":"GO:0046921"}


id: PBO:0002406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wybutosine biosynthesis protein Tyw3 (predicted)","termid":"PBO:0002406"}


id: MONDO:0012495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare primary bone dysplasia characterized by severe developmental delay and skeletal dysplasia (including short stature, premature carpal ossification, platyspondyly, longitudinal metaphyseal striations, and small epiphyses), as well as moderate to severe intellectual disability and facial dysmorphism, including prominent forehead, mild synophrys, depressed nasal bridge, prominent bulbous nasal tip and full lips.","definition_xrefs":["Orphanet:168454"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia, Genevieve type","secondary_identifiers":["GARD:10057","MEDGEN:355314","MESH:C535785","DOID:0080576","icd11.foundation:1383217537","OMIM:610442","UMLS:C1864872"],"synonyms":[{"name":"Nans deficiency","type":"related"},{"name":"SEMD Genevieve type","type":"related"},{"name":"SEMD, Genevieve type","type":"related"},{"name":"SEMD, Geneviève type","type":"exact"},{"name":"SEMDG","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia Genevieve type","type":"related"},{"name":"spondyloepimetaphyseal dysplasia, Camera-Genevieve type","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia, Genevieve type","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia, Geneviève type","type":"related"}],"termid":"MONDO:0012495","xrefs":{"Monarch":{"xref_id":"0012495"}}}


id: PBO:0068736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5A small nuclear 7, pseudogene","termid":"PBO:0068736"}


id: FYPO:0006322
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at stalled replication forks is increased.","definition_xrefs":["PMID:29215009","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to chromatin at stalled replication fork","synonyms":[{"name":"increased protein localisation to chromatin at stalled replication fork during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin at stalled replication fork during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006322"}


id: PBO:0083830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ethanol acetyltransferase; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion","termid":"PBO:0083830"}


id: GO:0010273
data:
  {"annotated_genes":["SJAG_04516"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96860],"is_not":false,"summary":null,"term":"GO:0010273"}]},"cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of copper ion. These include transport of copper away from sensitive areas and to compartments or complexes whose purpose is sequestration of copper ion.","definition_xrefs":["GOC:kmv","PMID:16367966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification of inorganic compound","termid":"GO:0061687"},{"relation_name":"part_of","term_name":"stress response to copper ion","termid":"GO:1990169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"detoxification of copper ion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010273","terms_by_termid":{"GO:0010273":null}}


id: PBO:0051277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-8","termid":"PBO:0051277"}


id: PBO:0067890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 192","termid":"PBO:0067890"}


id: GO:0030633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of D-alanine and related amino acids.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete D-alanine family amino acid catabolic process (obsolete GO:0030633)","synonyms":[{"name":"D-alanine family amino acid breakdown","type":"exact"},{"name":"D-alanine family amino acid catabolism","type":"exact"},{"name":"D-alanine family amino acid degradation","type":"exact"}],"termid":"GO:0030633"}


id: PBO:0056426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule affinity regulating kinase 1","termid":"PBO:0056426"}


id: PBO:0014613
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in Schizosaccharomyces","termid":"PBO:0014613"}


id: GO:0014036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a neural crest cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:dh","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell fate specification","termid":"GO:0048866"},{"relation_name":"part_of","term_name":"neural crest cell fate commitment","termid":"GO:0014034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest cell fate specification","termid":"GO:0014036"}


id: PBO:0083543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ribosomal protein gene RPL21A/YBR191W","termid":"PBO:0083543"}


id: PBO:0004089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GTPase binding protein Hba1","termid":"PBO:0004089"}


id: PBO:0063869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class B","termid":"PBO:0063869"}


id: PBO:0039553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 49","termid":"PBO:0039553"}


id: PBO:0045238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C19 pseudogene 6","termid":"PBO:0045238"}


id: PBO:0001250
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAtabolism of Arginine, after cerevisiae","termid":"PBO:0001250"}


id: SO:0000778
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non functional descendent of a tRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogenic_transcript","termid":"SO:0000516"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogenic_tRNA","synonyms":[{"name":"INSDC_feature:tRNA","type":"broad"},{"name":"INSDC_qualifier:pseudo","type":"exact"},{"name":"pseudogenic tRNA","type":"exact"}],"termid":"SO:0000778"}


id: FYPO:0003222
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to zearalenone. Cells stop growing (and may die) at a concentration of zearalenone that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0005447","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to zearalenone","synonyms":[{"name":"hypersensitive to zearalenone","type":"exact"},{"name":"sensitive to ZEA","type":"exact"},{"name":"sensitive to zearalenone during mitotic cell cycle","type":"related"},{"name":"sensitive to zearalenone during vegetative growth","type":"exact"}],"termid":"FYPO:0003222"}


id: GO:1990137
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: RH + ROOH = ROH + ROH.","definition_xrefs":["EC:1.11.2.3","PMID:19467604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on peroxide as acceptor","termid":"GO:0016684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"plant seed peroxygenase activity","secondary_identifiers":["MetaCyc:RXN-11819"],"synonyms":[{"name":"peroxygenase activity","type":"broad"},{"name":"plant seed peroxidase activity","type":"related"}],"termid":"GO:1990137"}


id: PBO:0040843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLM RecQ like helicase","termid":"PBO:0040843"}


id: MONDO:0044284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. The Gerbich blood group system contains 6 high-prevalence and 5 low-prevalence antigens that are expressed on glycophorin C (GPC), glycophorin D (GPD), or both GPC and GPD. GPC and GPD, which contribute stability to the red blood cell membrane, are encoded by the same gene, GYPC, through the use of alternative translational start sites. Deficiency of GPC and GPD is associated with hereditary elliptocytosis, and Gerbich antigens act as receptors for the malarial parasite Plasmodium falciparum (see OMIM:611162). The Gerbich antibodies anti-Ge2 and anti-Ge3 have caused hemolytic transfusion reactions, and anti-Ge3 has produced hemolytic disease of the fetus and newborn (review by {12:Walker and Reid, 2010}).","definition_xrefs":["OMIM:616089"],"gene_count":0,"genotype_count":0,"name":"obsolete blood group, gerbich system (obsolete MONDO:0044284)","synonyms":[{"name":"GE","type":"related"},{"name":"Gerbich blood Group system","type":"related"},{"name":"blood group, Gerbich","type":"exact"},{"name":"blood group, Gerbich system","type":"related"}],"termid":"MONDO:0044284","xrefs":{"Monarch":{"xref_id":"0044284"}}}


id: PBO:0058223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4513","termid":"PBO:0058223"}


id: PBO:0029707
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division","termid":"PBO:0029707"}


id: PR:O14187
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-processing-splicing factor 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01110","PANTHER:PTHR11140:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor spp42 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.12c","secondary_identifiers":["UniProtKB:O14187"],"synonyms":[{"name":"Spom972h-PRPF8","type":"exact"},{"name":"complexed with cdc5 protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14187"}


id: MONDO:0957560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hearing loss, noise-induced, susceptibility to","secondary_identifiers":["OMIM:613035","UMLS:C2751629","MEDGEN:414426"],"termid":"MONDO:0957560","xrefs":{"Monarch":{"xref_id":"0957560"}}}


id: MONDO:0004189
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tuberculosis that involves the esophagus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"},{"relation_name":"is_a","term_name":"gastrointestinal tuberculosis","termid":"MONDO:0005768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"esophageal tuberculosis","secondary_identifiers":["ICD9:017.80","UMLS:C0152902","ICD9:017.83","ICD9:017.81","DOID:7332","MEDGEN:509082","ICD9:017.8","SCTID:15284007"],"synonyms":[{"name":"esophagus tuberculosis","type":"exact"},{"name":"oesophagus tuberculosis","type":"exact"},{"name":"tuberculosis of esophagus","type":"exact"},{"name":"tuberculosis of oesophagus","type":"exact"}],"termid":"MONDO:0004189","xrefs":{"Monarch":{"xref_id":"0004189"}}}


id: GO:0042711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Female behaviors associated with the care and rearing of offspring.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parental behavior","termid":"GO:0060746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maternal behavior","synonyms":[{"name":"maternal behaviour","type":"exact"}],"termid":"GO:0042711"}


id: MONDO:0010373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ovarian failure in which the cause of the disease is a mutation in the POF1B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 2B","secondary_identifiers":["MEDGEN:337159","UMLS:C1845105","MESH:C564476","DOID:0080859","OMIM:300604"],"synonyms":[{"name":"POF1B primary ovarian failure","type":"exact"},{"name":"POF2B","type":"related"},{"name":"premature ovarian failure 2B","type":"exact"},{"name":"premature ovarian failure 2B, X-linked recessive","type":"exact"},{"name":"premature ovarian failure type 2B","type":"exact"},{"name":"primary ovarian failure caused by mutation in POF1B","type":"exact"}],"termid":"MONDO:0010373","xrefs":{"Monarch":{"xref_id":"0010373"}}}


id: PBO:0056677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myocyte enhancer factor 2B","termid":"PBO:0056677"}


id: PATO:0002119
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality which is held by a bearer when the latter exhibits an excessive accumulation of intracellular fluid.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydropic","termid":"PATO:0002119"}


id: GO:0006669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sphinganine-1-phosphate, the phosphorylated derivative of D-erythro-2-amino-1,3-octadecanediol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphinganine-1-phosphate metabolic process","termid":"GO:0006668"},{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"sphingolipid biosynthetic process","termid":"GO:0030148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sphinganine-1-phosphate biosynthetic process","synonyms":[{"name":"dihydrosphingosine-1-phosphate biosynthesis","type":"exact"},{"name":"dihydrosphingosine-1-phosphate biosynthetic process","type":"exact"},{"name":"sphinganine-1-phosphate anabolism","type":"exact"},{"name":"sphinganine-1-phosphate biosynthesis","type":"exact"},{"name":"sphinganine-1-phosphate formation","type":"exact"},{"name":"sphinganine-1-phosphate synthesis","type":"exact"}],"termid":"GO:0006669"}


id: GO:0008119
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a thiopurine = S-adenosyl-L-homocysteine + a thiopurine S-methylether.","definition_xrefs":["EC:2.1.1.67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methyltransferase activity","termid":"GO:0008172"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"thiopurine S-methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9748983","Reactome:R-HSA-158609","MetaCyc:THIOPURINE-S-METHYLTRANSFERASE-RXN","Reactome:R-HSA-5603379","Reactome:R-HSA-9748979"],"synonyms":[{"name":"6-thiopurine transmethylase activity","type":"related"},{"name":"S-adenosyl-L-methionine:thiopurine S-methyltransferase activity","type":"related"},{"name":"TPMT","type":"related"},{"name":"mercaptopurine methyltransferase activity","type":"related"},{"name":"thiopurine methyltransferase activity","type":"related"}],"termid":"GO:0008119"}


id: FYPO:0001945
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein secretion is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein transport during vegetative growth","termid":"FYPO:0004848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein secretion","synonyms":[{"name":"normal protein secretion during mitotic cell cycle","type":"related"},{"name":"normal protein secretion during vegetative growth","type":"exact"}],"termid":"FYPO:0001945"}


id: PBO:0050611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSD17B3 antisense RNA 1","termid":"PBO:0050611"}


id: PBO:0086797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YBR184W is not an essential gene","termid":"PBO:0086797"}


id: PBO:0039028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 4","termid":"PBO:0039028"}


id: PBO:0072277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S23 pseudogene 6","termid":"PBO:0072277"}


id: PBO:0042104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 177","termid":"PBO:0042104"}


id: PBO:0089062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1/TPR repeat protein1, 3-beta-glucan synthase regulatory factor Chf3/Chr4","termid":"PBO:0089062"}


id: GO:2000045
data:
  {"annotated_genes":["SJAG_03681","SJAG_04140","SJAG_01210","SJAG_02810","SJAG_05346","SJAG_03591","SJAG_00991","SJAG_02404","SJAG_01825","SJAG_00071","SJAG_01311","SJAG_02723","SJAG_02026","SJAG_00169","SJAG_00996","SJAG_03699","SJAG_03048","SJAG_01401"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91228,105462,116569],"is_not":false,"summary":null,"term":"GO:2000045"},{"annotations":[115399,88420,101119,101861,108375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031568"},{"annotations":[90791,109165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[91224,88421,91644,92810,98376,108376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000134"},{"annotations":[108675,105306,106145,116567,101121,101876,105461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900087"},{"annotations":[91230,108381,110695,115401,101123,114837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007089"}]},"cv_name":"biological_process","definition":"Any signaling pathway that modulates the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G1 phase to S phase of the mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle phase transition","termid":"GO:1901990"},{"relation_name":"is_a","term_name":"regulation of cell cycle G1/S phase transition","termid":"GO:1902806"},{"relation_name":"regulates","term_name":"G1/S transition of mitotic cell cycle","termid":"GO:0000082"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00169":null,"SJAG_00991":null,"SJAG_00996":null,"SJAG_01210":null,"SJAG_01311":null,"SJAG_01401":null,"SJAG_01825":null,"SJAG_02026":null,"SJAG_02404":null,"SJAG_02723":null,"SJAG_02810":null,"SJAG_03048":null,"SJAG_03591":null,"SJAG_03681":null,"SJAG_03699":null,"SJAG_04140":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044772"}],"interesting_parent_ids":["GO:0007049","GO:0044772","GO:0008150"],"is_obsolete":false,"name":"regulation of G1/S transition of mitotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000045","terms_by_termid":{"GO:0007089":null,"GO:0031568":null,"GO:0031571":null,"GO:1900087":null,"GO:2000045":null,"GO:2000134":null}}


id: PBO:0051009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily DCC subclass member 4","termid":"PBO:0051009"}


id: MONDO:0002259
data:
  {"annotated_genes":["SJAG_04337","SJAG_04148","SJAG_03418","SJAG_03051","SJAG_04950","SJAG_00630","SJAG_02690","SJAG_00301","SJAG_03077","SJAG_00377","SJAG_04114","SJAG_02954","SJAG_04703","SJAG_04110","SJAG_04738","SJAG_02829","SJAG_03720","SJAG_04398","SJAG_00103","SJAG_02294","SJAG_02339","SJAG_03698"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009916"},{"annotations":[85311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000015"},{"annotations":[85810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012794"},{"annotations":[84893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008840"},{"annotations":[86352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008980"},{"annotations":[85698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010814"},{"annotations":[85451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009258"},{"annotations":[84985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009514"},{"annotations":[84694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010961"},{"annotations":[86440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030736"},{"annotations":[85126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013689"},{"annotations":[85885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054850"},{"annotations":[86686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013972"},{"annotations":[85496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014126"},{"annotations":[86185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014497"},{"annotations":[85112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014843"},{"annotations":[85903,85902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054862"},{"annotations":[85197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030870"},{"annotations":[85599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958035"},{"annotations":[86494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010350"},{"annotations":[86088,86087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014321"}]},"cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects the testis or the ovary.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00103":null,"SJAG_00301":null,"SJAG_00377":null,"SJAG_00630":null,"SJAG_02294":null,"SJAG_02339":null,"SJAG_02690":null,"SJAG_02829":null,"SJAG_02954":null,"SJAG_03051":null,"SJAG_03077":null,"SJAG_03418":null,"SJAG_03698":null,"SJAG_03720":null,"SJAG_04110":null,"SJAG_04114":null,"SJAG_04148":null,"SJAG_04337":null,"SJAG_04398":null,"SJAG_04703":null,"SJAG_04738":null,"SJAG_04950":null},"genotype_count":0,"is_obsolete":false,"name":"gonadal disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:9074","MESH:D006058","DOID:2277","NCIT:C26786","UMLS:C0018050"],"synonyms":[{"name":"disease of gonad","type":"exact"},{"name":"disease or disorder of gonad","type":"exact"},{"name":"disorder of gonad","type":"exact"},{"name":"disorder of gonads","type":"exact"},{"name":"gonad disease","type":"exact"},{"name":"gonad disease or disorder","type":"exact"},{"name":"gonadal disorder","type":"exact"},{"name":"gonadal disorders","type":"exact"}],"termid":"MONDO:0002259","terms_by_termid":{"MONDO:0008840":null,"MONDO:0008980":null,"MONDO:0009258":null,"MONDO:0009514":null,"MONDO:0009916":null,"MONDO:0010350":null,"MONDO:0010814":null,"MONDO:0010961":null,"MONDO:0012794":null,"MONDO:0013689":null,"MONDO:0013972":null,"MONDO:0014126":null,"MONDO:0014321":null,"MONDO:0014497":null,"MONDO:0014843":null,"MONDO:0030736":null,"MONDO:0030870":null,"MONDO:0054850":null,"MONDO:0054862":null,"MONDO:0958035":null,"MONDO:8000015":null},"xrefs":{"Monarch":{"xref_id":"0002259"}}}


id: GO:0098712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-glutamate from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamate transmembrane transport","termid":"GO:0015813"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"L-glutamate import across plasma membrane","secondary_identifiers":["GO:1903802","GO:1990123"],"synonyms":[{"name":"L-glutamate import into cell","type":"exact"},{"name":"L-glutamate(1-) import across plasma membrane","type":"broad"},{"name":"L-glutamate(1-) import into cell","type":"exact"}],"termid":"GO:0098712"}


id: MONDO:0019761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Laryngo-tracheo-esophageal cleft (LC) type 1 is a congenital respiratory tract anomaly characterized by a supraglottic, interarytenoid cleft above the vocal folds with moderate respiratory symptoms.","definition_xrefs":["Orphanet:93938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngotracheoesophageal cleft","termid":"MONDO:0016060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"laryngotracheoesophageal cleft type 1","secondary_identifiers":["MEDGEN:667239","UMLS:C0584823","GARD:19236"],"synonyms":[{"name":"LTEC I","type":"exact"},{"name":"LTEC1","type":"exact"},{"name":"laryngo-tracheo-esophageal cleft type 1","type":"exact"}],"termid":"MONDO:0019761","xrefs":{"Monarch":{"xref_id":"0019761"}}}


id: MONDO:0008718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Morvan syndrome is a rare, life-threatening, acquired neurologic disease characterized by neuromyotonia, dysautonomia and encephalopathy with severe insomnia. Signs involving central (e.g. hallucinations, confusion, amnesia, myoclonus), autonomic (e.g. variations in blood pressure, hyperhidrosis) and peripheral (e.g. painful cramps, myokymia) hyperactivity, as well as systemic manifestations (such as weight loss, pruritus, fever), are reported. Thymoma is present in some cases.","definition_xrefs":["Orphanet:83467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular channelopathy","termid":"MONDO:0019119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Morvan syndrome","secondary_identifiers":["UMLS:C3854373","GARD:9766","MEDGEN:1632829","SCTID:763803004","EFO:1001897"],"synonyms":[{"name":"Morvan's fibrillary chorea","type":"exact"},{"name":"limbic encephalitis-neuromyotonia-hyperhidrosis-polyneuropathy syndrome","type":"exact"}],"termid":"MONDO:0008718","xrefs":{"Monarch":{"xref_id":"0008718"}}}


id: MOD:00385
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-asparagine residue and a glycine residue to form L-asparagine 5-imidazolinone glycine.","definition_xrefs":["PubMed:10504696","RESID:AA0380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-imidazolinone ring crosslinked residues (Gly)","termid":"MOD:01882"},{"relation_name":"is_a","term_name":"crosslinked L-asparagine residue","termid":"MOD:02042"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-asparagine 5-imidazolinone glycine","synonyms":[{"name":"(2-[(1S)-1,3-diamino-3-oxopropyl]-5-oxo-4,5-dihydro-1H-imidazol-1-yl)acetic acid","type":"exact"},{"name":"2-[(S)-1,3-diamino-3-oxopropyl]-1-carboxymethyl-1-imidazolin-5-one","type":"exact"},{"name":"CROSSLNK 5-imidazolinone (Asn-Gly)","type":"exact"},{"name":"L-asparagine 5-imidazolinone glycine","type":"exact"},{"name":"Zoanthus sp. fluorescent protein FP506 chromophore","type":"exact"},{"name":"[2-(1,3-diamino-3-oxopropyl)-5-oxo-4,5-dihydro-imidazol-1-yl]-acetic acid","type":"exact"},{"name":"asparaginyl-5-imidazolinone glycine","type":"exact"},{"name":"para-hydroxybenzylidene-imidazolidinone chromophore","type":"exact"}],"termid":"MOD:00385"}


id: PBO:0079179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 8","termid":"PBO:0079179"}


id: PBO:0049967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 13","termid":"PBO:0049967"}


id: MONDO:0009117
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disorganization, mouse, homolog of (obsolete MONDO:0009117)","secondary_identifiers":["OMIM:223200"],"synonyms":[{"name":"Ds","type":"related"},{"name":"disorganization, mouse, homolog OF","type":"related"}],"termid":"MONDO:0009117","xrefs":{"Monarch":{"xref_id":"0009117"}}}


id: PR:B5BP45
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cystine/glutamate transporter that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized amino-acid permease C460.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC460.01c","secondary_identifiers":["UniProtKB:B5BP45"],"synonyms":[{"name":"Spom972h-SLC7A11","type":"exact"}],"termid":"PR:B5BP45"}


id: PBO:0066830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 129","termid":"PBO:0066830"}


id: GO:0008286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of the insulin receptor binding to insulin.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"},{"relation_name":"part_of","term_name":"cellular response to insulin stimulus","termid":"GO:0032869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"insulin receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-74752"],"synonyms":[{"name":"daf-2 receptor signaling pathway","type":"narrow"},{"name":"insulin receptor signalling pathway","type":"exact"}],"termid":"GO:0008286"}


id: PR:O94395
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An X-ray repair cross-complementing protein 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12604:SF2","PRO:DNx","OMA:SCHPO04947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase II subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.02c","secondary_identifiers":["UniProtKB:O94395"],"synonyms":[{"name":"ATP-dependent DNA helicase II subunit Ku70 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-XRCC6","type":"exact"}],"termid":"PR:O94395"}


id: MONDO:0001223
data:
  {"annotated_genes":["SJAG_01151","SJAG_04978"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007767"},{"annotations":[85156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007768"},{"annotations":[85367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012004"},{"annotations":[84499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011301"}]},"cv_name":"mondo","definition":"A disease involving the parathyroid gland.","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01151":null,"SJAG_04978":null},"genotype_count":0,"is_obsolete":false,"name":"parathyroid gland disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:11201","MESH:D010279","ICD9:252.8","UMLS:C4025822","EFO:0005754","ICD9:252.9","SCTID:73132005","NCIT:C26844","ICD9:252","MEDGEN:893009"],"synonyms":[{"name":"disease of parathyroid gland","type":"exact"},{"name":"disease of parathyroid glands","type":"exact"},{"name":"disease or disorder of parathyroid gland","type":"exact"},{"name":"disorder of parathyroid gland","type":"exact"},{"name":"parathyroid disease","type":"exact"},{"name":"parathyroid gland disease","type":"exact"},{"name":"parathyroid gland disease or disorder","type":"exact"},{"name":"parathyroid gland diseases","type":"exact"},{"name":"parathyroid gland disorder","type":"exact"},{"name":"parathyroid gland disorders","type":"exact"}],"termid":"MONDO:0001223","terms_by_termid":{"MONDO:0007767":null,"MONDO:0007768":null,"MONDO:0011301":null,"MONDO:0012004":null},"xrefs":{"Monarch":{"xref_id":"0001223"}}}


id: MONDO:0007270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated restrictive cardiomyopathy in which the cause of the disease is a mutation in the TNNI3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial restrictive cardiomyopathy","termid":"MONDO:0016340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, familial restrictive, 1","secondary_identifiers":["DOID:0111425","MESH:C566168","OMIM:115210","MEDGEN:396236","UMLS:C1861861","GARD:18070"],"synonyms":[{"name":"RCM1","type":"related"},{"name":"Rcm","type":"related"},{"name":"TNNI3 familial isolated restrictive cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, familial restrictive, 1","type":"exact"},{"name":"cardiomyopathy, familial restrictive, type 1","type":"exact"},{"name":"familial isolated restrictive cardiomyopathy caused by mutation in TNNI3","type":"exact"}],"termid":"MONDO:0007270","xrefs":{"Monarch":{"xref_id":"0007270"}}}


id: MONDO:0020581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tumor with perivascular epithelioid cell differentiation characterized by the absence of pleomorphism and scarcity or absence of mitotic figures.","definition_xrefs":["NCIT:C121791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm with perivascular epithelioid cell differentiation","termid":"MONDO:0006359"},{"relation_name":"is_a","term_name":"benign soft tissue neoplasm","termid":"MONDO:0044335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign PEComa","secondary_identifiers":["UMLS:C3839685","MEDGEN:825530"],"synonyms":[{"name":"benign PEComa","type":"exact"},{"name":"benign PEComa, nos","type":"exact"},{"name":"benign PEComa, not otherwise specified","type":"exact"},{"name":"benign neoplasm with perivascular epithelioid cell differentiation","type":"exact"},{"name":"neoplasm with perivascular epithelioid cell differentiation, benign","type":"exact"},{"name":"typical PEComa","type":"exact"}],"termid":"MONDO:0020581","xrefs":{"Monarch":{"xref_id":"0020581"}}}


id: PBO:0001161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA lariat debranching enzyme Dbr1","termid":"PBO:0001161"}


id: PBO:0061775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obscurin like cytoskeletal adaptor 1","termid":"PBO:0061775"}


id: PBO:0068443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 17, pseudogene","termid":"PBO:0068443"}


id: RO:0002468
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"is_symbiosis","termid":"RO:0002465"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_parasitism","termid":"RO:0002468"}


id: PBO:0044391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 8","termid":"PBO:0044391"}


id: GO:0009368
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex comprised of members of the ClpX, ClpC, ClpD, ClpP or ClpR protein families. ClpPs are the proteolytic subunit of active complexes, and ClpA and ClpX form the regulatory subunits. Enzymatically active and inactive complexes can form.","definition_xrefs":["PMID:11352464","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"endopeptidase Clp complex","termid":"GO:0009368"}


id: GO:0009380
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any of the protein complexes formed by the UvrABC excinuclease system, which carries out nucleotide excision repair. Three different complexes are formed by the 3 proteins as they proceed through the excision repair process. First a complex consisting of two A subunits and two B subunits bind DNA and unwind it around the damaged site. Then, the A subunits disassociate leaving behind a stable complex between B subunits and DNA. Now, subunit C binds to this B+DNA complex and causes subunit B to nick the DNA on one side of the complex while subunit C nicks the DNA on the other side of the complex. DNA polymerase I and DNA ligase can then repair the resulting gap.","definition_xrefs":["GOC:mah","GOC:mlg","PMID:15192705","PMID:12145219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endodeoxyribonuclease complex","termid":"GO:1905347"},{"relation_name":"is_a","term_name":"DNA repair complex","termid":"GO:1990391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"excinuclease repair complex","synonyms":[{"name":"UvrABC excinuclease complex","type":"exact"},{"name":"excinuclease ABC complex","type":"exact"}],"termid":"GO:0009380"}


id: GO:0033630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of cell adhesion mediated by integrin.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell adhesion mediated by integrin","termid":"GO:0033628"},{"relation_name":"is_a","term_name":"positive regulation of cell adhesion","termid":"GO:0045785"},{"relation_name":"positively_regulates","term_name":"cell adhesion mediated by integrin","termid":"GO:0033627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of cell adhesion mediated by integrin","synonyms":[{"name":"positive regulation of cell adhesion mediated by integrin complex","type":"exact"}],"termid":"GO:0033630"}


id: MONDO:0013145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Brugada syndrome in which the cause of the disease is a mutation in the KCNE3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Brugada syndrome","termid":"MONDO:0015263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Brugada syndrome 6","secondary_identifiers":["OMIM:613119","GARD:15619","DOID:0110223","MESH:C567735","UMLS:C2751089","MEDGEN:413473"],"synonyms":[{"name":"BRGDA6","type":"exact"},{"name":"Brugada syndrome 6","type":"exact"},{"name":"Brugada syndrome caused by mutation in KCNE3","type":"exact"},{"name":"Brugada syndrome type 6","type":"exact"},{"name":"KCNE3 Brugada syndrome","type":"exact"}],"termid":"MONDO:0013145","xrefs":{"Monarch":{"xref_id":"0013145"}}}


id: MONDO:1010236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Syringomyelia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syringomyelia, non-human animal","secondary_identifiers":["OMIA:000965"],"termid":"MONDO:1010236","xrefs":{"Monarch":{"xref_id":"1010236"}}}


id: PBO:0069551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 822, pseudogene","termid":"PBO:0069551"}


id: PBO:0031044
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_concentration_of_substance_in_growth_medium","termid":"PBO:0031044"}


id: PR:Q10367
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- glo3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor GTPase-activating protein glo3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.17c","synonyms":[{"name":"ARF GAP glo3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-glo3","type":"exact"}],"termid":"PR:Q10367"}


id: GO:2000347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hepatocyte proliferation.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"is_a","term_name":"regulation of hepatocyte proliferation","termid":"GO:2000345"},{"relation_name":"positively_regulates","term_name":"hepatocyte proliferation","termid":"GO:0072574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hepatocyte proliferation","termid":"GO:2000347"}


id: GO:0021572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of rhombomere 6 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cls","GOC:curators","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 6 development","termid":"GO:0021572"}


id: PBO:0001366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolase (inferred_from_context)","termid":"PBO:0001366"}


id: GO:0018507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3S,4R)-3,4-dihydrophenanthrene-3,4-diol + NAD+ = H+ + NADH + phenanthrene-3,4-diol.","definition_xrefs":["RHEA:16253","EC:1.3.1.49"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cis-3,4-dihydrophenanthrene-3,4-diol dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0488","KEGG_REACTION:R04151","MetaCyc:1.3.1.49-RXN"],"synonyms":[{"name":"(+)-cis-3,4-dihydrophenanthrene-3,4-diol:NAD+ 3,4-oxidoreductase activity","type":"related"},{"name":"cis-3,4-dihydroxy-3,4-dihydrophenanthrene dehydrogenase activity","type":"exact"}],"termid":"GO:0018507"}


id: PBO:0002033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease subunit Sen15 (predicted)","termid":"PBO:0002033"}


id: PBO:0090582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 3, Pup3","termid":"PBO:0090582"}


id: PR:Q9UST5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrn7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UST5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I-specific transcription initiation factor rrn7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.09c","synonyms":[{"name":"Spom972h-rrn7","type":"exact"}],"termid":"PR:Q9UST5"}


id: PBO:0108590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Morf4 family associated protein 1 like 2","termid":"PBO:0108590"}


id: GO:0045242
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that possesses isocitrate dehydrogenase (NAD+) activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid cycle heteromeric enzyme complex","termid":"GO:0045239"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"isocitrate dehydrogenase complex (NAD+)","termid":"GO:0045242"}


id: PBO:0068499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 84, pseudogene","termid":"PBO:0068499"}


id: MONDO:0013156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type B","termid":"MONDO:0000172"},{"relation_name":"is_a","term_name":"myopathy caused by variation in FKTN","termid":"MONDO:0700067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322","MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy (congenital without intellectual disability), type B4","secondary_identifiers":["OMIM:613152","UMLS:C2751052","DOID:0112379","GARD:18456","MEDGEN:413465"],"synonyms":[{"name":"MDDGB4","type":"related"},{"name":"congenital muscular dystrophy-FKTN related","type":"exact"},{"name":"muscular dystrophy, congenital, Fktn-related","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (congenital without intellectual disability), type B, 4","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (congenital without mental retardation), type B, 4","type":"related"}],"termid":"MONDO:0013156","xrefs":{"Monarch":{"xref_id":"0013156"}}}


id: FYPO:0002869
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the site of cell division is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell division site","termid":"FYPO:0001401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to cell division site","synonyms":[{"name":"decreased protein localisation to cell division site","type":"exact"},{"name":"decreased protein localization to cell division site during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cell division site during vegetative growth","type":"exact"},{"name":"decreased protein recruitment to cell division site","type":"related"},{"name":"reduced protein localization to cell division site","type":"exact"}],"termid":"FYPO:0002869"}


id: PBO:0052172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 3","termid":"PBO:0052172"}


id: GO:0047760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + an acid + CoA = AMP + diphosphate + an acyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete butyrate-CoA ligase activity (obsolete GO:0047760)","termid":"GO:0047760"}


id: PBO:0074879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 59A","termid":"PBO:0074879"}


id: GO:0102527
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-amino-4,7-dihydroxycoumarin + 3-dimethylallyl-4-hydroxybenzoate + ATP(4-) = H+ + 8-desmethylnovobiocic acid(1-) + AMP(2-) + diphosphoric acid.","definition_xrefs":["EC:6.3.1.15","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-ammonia (or amide) ligase activity","termid":"GO:0016880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"8-demethylnovobiocate synthase activity","secondary_identifiers":["MetaCyc:RXN-14547","RHEA:36699"],"termid":"GO:0102527"}


id: PBO:0088474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Erg28 protein","termid":"PBO:0088474"}


id: PBO:0084346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Largest subunit of the origin recognition complex; involved in directing DNA replication by binding to replication origins; also involved in transcriptional silencing; exhibits ATPase activity; ORC1 has a paralog, SIR3, that arose from the whole genome duplication","termid":"PBO:0084346"}


id: GO:1904206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of skeletal muscle hypertrophy.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23470307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of muscle hypertrophy","termid":"GO:0014742"},{"relation_name":"is_a","term_name":"positive regulation of muscle adaptation","termid":"GO:0014744"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle hypertrophy","termid":"GO:1904204"},{"relation_name":"positively_regulates","term_name":"skeletal muscle hypertrophy","termid":"GO:0014734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of skeletal muscle hypertrophy","synonyms":[{"name":"activation of skeletal muscle hypertrophy","type":"narrow"},{"name":"up regulation of skeletal muscle hypertrophy","type":"exact"},{"name":"up-regulation of skeletal muscle hypertrophy","type":"exact"},{"name":"upregulation of skeletal muscle hypertrophy","type":"exact"}],"termid":"GO:1904206"}


id: PBO:0039744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein L6","termid":"PBO:0039744"}


id: GO:1904076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of estrogen biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24530842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hormone biosynthetic process","termid":"GO:0046885"},{"relation_name":"is_a","term_name":"regulation of steroid biosynthetic process","termid":"GO:0050810"},{"relation_name":"regulates","term_name":"estrogen biosynthetic process","termid":"GO:0006703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of estrogen biosynthetic process","synonyms":[{"name":"regulation of estrogen anabolism","type":"exact"},{"name":"regulation of estrogen biosynthesis","type":"exact"},{"name":"regulation of estrogen formation","type":"exact"},{"name":"regulation of estrogen synthesis","type":"exact"},{"name":"regulation of oestrogen biosynthesis","type":"exact"},{"name":"regulation of oestrogen biosynthetic process","type":"exact"}],"termid":"GO:1904076"}


id: PBO:0016929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cortical patch component Aip1","termid":"PBO:0016929"}


id: GO:1990636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A life cycle stage during which the reproductive capacity and fitness of an organism declines.","definition_xrefs":["PMID:25523082","PMID:27353257","PMID:24914937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological phase","termid":"GO:0044848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reproductive senescence","synonyms":[{"name":"ovarian senescence","type":"narrow"}],"termid":"GO:1990636"}


id: GO:0003945
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + N-acetyl-D-glucosamine = UDP + N-acetyllactosamine.","definition_xrefs":["EC:2.4.1.90"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"N-acetyllactosamine synthase activity","secondary_identifiers":["RHEA:17745","MetaCyc:N-ACETYLLACTOSAMINE-SYNTHASE-RXN"],"synonyms":[{"name":"Gal-T","type":"related"},{"name":"N-acetylglucosamine (beta-1,4)galactosyltransferase activity","type":"related"},{"name":"N-acetylglucosamine beta-(1,4)-galactosyltransferase activity","type":"related"},{"name":"N-acetyllactosamine synthetase activity","type":"related"},{"name":"NAL synthetase activity","type":"related"},{"name":"UDP-Gal:N-acetylglucosamine beta-1,4-galactosyltransferase activity","type":"related"},{"name":"UDP-beta-1,4-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose N-acetylglucosamine beta-4-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose-N-acetylglucosamine beta-1,4-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose-N-acetylglucosamine beta-D-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose-N-acetylglucosamine galactosyltransferase activity","type":"related"},{"name":"UDP-galactose-acetylglucosamine galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:N-acetyl-D-glucosamine 4-beta-D-galactosyltransferase activity","type":"exact"},{"name":"UDP-galactose:N-acetylglucosaminide beta-1,4-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose-N-acetylglucosamine beta-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:N-acetyl-D-glucosamine 4-beta-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:N-acetylglucosaminyl(beta-1,4)galactosyltransferase activity","type":"related"},{"name":"acetyllactosamine synthetase activity","type":"related"},{"name":"beta-(1,4)-galactosyltransferase activity","type":"related"},{"name":"beta-1,4-GalT","type":"related"},{"name":"beta-1,4-galactosyltransferase activity","type":"related"},{"name":"beta-N-acetylglucosaminide beta-1,4-galactosyltransferase activity","type":"related"},{"name":"lactosamine synthase activity","type":"related"},{"name":"lactosamine synthetase activity","type":"related"},{"name":"lactose synthetase A protein","type":"related"},{"name":"uridine diphosphogalactose-acetylglucosamine galactosyltransferase activity","type":"related"}],"termid":"GO:0003945"}


id: PBO:0031015
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_vanadate","termid":"PBO:0031015"}


id: GO:0018192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of an enzyme active site via modification of peptidyl-cysteine to peptidyl-L-cysteine persulfide.","definition_xrefs":["RESID:AA0269"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via cysteine modification to L-cysteine persulfide (obsolete GO:0018192)","synonyms":[{"name":"enzyme active site formation via L-cysteine persulphide","type":"exact"}],"termid":"GO:0018192"}


id: GO:1905931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vascular smooth muscle cell differentiation involved in phenotypic switching.","definition_xrefs":["GOC:rph","GOC:BHF","GO_REF:0000058","PMID:25089138","GOC:BHF_miRNA","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vascular associated smooth muscle cell differentiation","termid":"GO:1905064"},{"relation_name":"is_a","term_name":"negative regulation of cell differentiation involved in phenotypic switching","termid":"GO:1905916"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching","termid":"GO:1905930"},{"relation_name":"negatively_regulates","term_name":"vascular associated smooth muscle cell differentiation involved in phenotypic switching","termid":"GO:1905420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching","synonyms":[{"name":"down regulation of VSMC differentiation involved in phenotypic dimorphism","type":"related"},{"name":"down regulation of VSMC differentiation involved in phenotypic switching","type":"exact"},{"name":"down regulation of vascular associated smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"down regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"down regulation of vascular smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"down regulation of vascular smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"down-regulation of VSMC differentiation involved in phenotypic dimorphism","type":"related"},{"name":"down-regulation of VSMC differentiation involved in phenotypic switching","type":"exact"},{"name":"down-regulation of vascular associated smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"down-regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"down-regulation of vascular smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"down-regulation of vascular smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"downregulation of VSMC differentiation involved in phenotypic dimorphism","type":"related"},{"name":"downregulation of VSMC differentiation involved in phenotypic switching","type":"exact"},{"name":"downregulation of vascular associated smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"downregulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"downregulation of vascular smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"downregulation of vascular smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"inhibition of VSMC differentiation involved in phenotypic dimorphism","type":"related"},{"name":"inhibition of VSMC differentiation involved in phenotypic switching","type":"narrow"},{"name":"inhibition of vascular associated smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"inhibition of vascular associated smooth muscle cell differentiation involved in phenotypic switching","type":"narrow"},{"name":"inhibition of vascular smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"inhibition of vascular smooth muscle cell differentiation involved in phenotypic switching","type":"narrow"},{"name":"negative regulation of VSMC differentiation involved in phenotypic dimorphism","type":"related"},{"name":"negative regulation of VSMC differentiation involved in phenotypic switching","type":"exact"},{"name":"negative regulation of vascular associated smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"negative regulation of vascular smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"negative regulation of vascular smooth muscle cell differentiation involved in phenotypic switching","type":"exact"}],"termid":"GO:1905931"}


id: PBO:0055871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRC2 antisense RNA 1","termid":"PBO:0055871"}


id: PBO:0041322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 74","termid":"PBO:0041322"}


id: PBO:0066662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor interacting serine/threonine kinase 3","termid":"PBO:0066662"}


id: PBO:0074782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 4A","termid":"PBO:0074782"}


id: PBO:0110359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENR pseudogene 3","termid":"PBO:0110359"}


id: GO:0072175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of an epithelial tube.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube formation","termid":"GO:0035148"},{"relation_name":"part_of","term_name":"epithelial tube morphogenesis","termid":"GO:0060562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial tube formation","termid":"GO:0072175"}


id: GO:0030863
data:
  {"annotated_genes":["SJAG_03088","SJAG_05285","SJAG_02228","SJAG_00920","SJAG_00521","SJAG_04498","SJAG_02431","SJAG_01889","SJAG_00938","SJAG_04100","SJAG_04597","SJAG_04621","SJAG_03011","SJAG_02282","SJAG_02700","SJAG_02864","SJAG_00279","SJAG_02266","SJAG_02320","SJAG_00807","SJAG_00663","SJAG_01277","SJAG_01143","SJAG_02838","SJAG_02278","SJAG_00700","SJAG_02831","SJAG_03631","SJAG_02392","SJAG_02511","SJAG_02087","SJAG_01665","SJAG_03380","SJAG_00677","SJAG_03704","SJAG_02202","SJAG_04465","SJAG_00185","SJAG_03564","SJAG_02737","SJAG_03374","SJAG_03379","SJAG_01993","SJAG_02075","SJAG_04077","SJAG_04001","SJAG_00152","SJAG_03375","SJAG_02336","SJAG_00140","SJAG_03681","SJAG_04509","SJAG_01787","SJAG_04517","SJAG_01732","SJAG_03465","SJAG_00113","SJAG_02177","SJAG_01224","SJAG_02045","SJAG_03044","SJAG_01297","SJAG_04886","SJAG_03596","SJAG_04724","SJAG_03455","SJAG_02169","SJAG_04461","SJAG_03025","SJAG_04624","SJAG_01114","SJAG_00229","SJAG_03887","SJAG_04375","SJAG_00970","SJAG_02245","SJAG_04052","SJAG_00851","SJAG_02626","SJAG_00228","SJAG_03119","SJAG_00082","SJAG_00845","SJAG_00268","SJAG_03625","SJAG_04479","SJAG_04887","SJAG_03703","SJAG_01268","SJAG_00907","SJAG_01964","SJAG_02286","SJAG_04703","SJAG_03073","SJAG_03145","SJAG_00750","SJAG_01613","SJAG_01894","SJAG_02561","SJAG_01748","SJAG_01384","SJAG_01370","SJAG_03086","SJAG_04982","SJAG_03581","SJAG_04644","SJAG_00649","SJAG_02566","SJAG_03146","SJAG_04781"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94845,117366],"is_not":false,"summary":null,"term":"GO:0030863"},{"annotations":[88840],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030478"},{"annotations":[92057,102744,92014,104648,107484,98813,105508,108224,101213,104630,113808,93131,97208,89296,97405,110507,90149,99358,111652,114373,110173,87620,98330,98390,100415,106520,106645,106335,94277,111157,108540,102806,115663,106373,87726,94374,102010,93300,101243,111353,117988,100446,112396,99176,104840,102559,111678,118352,102238,90353,94762],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030479"},{"annotations":[118631,101919,118633,118640,118634,118630,118632,118785],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005826"},{"annotations":[98706,100916,103380,90858,98112,107727],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0055028"},{"annotations":[110889,90466,87225,97060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030981"},{"annotations":[103244,97061,94683],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903754"},{"annotations":[91384,117654],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036286"},{"annotations":[90469],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032117"},{"annotations":[117390,100428,118133,111791,90246,92018,94419,110247,87747,112848,100759,117138,118773,117372,95805,97787,105692,94769,103195,104844,106376,107617,91806,115394,110286,93304,116525,118769,119033,89288,115310,94062,118331,90200,100194,93889,118764,92065,96689,97136,89460,100766,106528,118766,88801,97519,118771,101923,87362],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110085"},{"annotations":[100027,100195,108546,104635,117373],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120106"},{"annotations":[87748,89461,95331,112849,117391,96690,117374,90247,105693,110287,94420,95806,108547,103196,100429,111792,93890],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120105"},{"annotations":[100457,116432,103419,117375,99608,91807,97386,106529,97520,108548,101924,107618,92066,116526,97137],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120104"}]},"cv_name":"cellular_component","definition":"The portion of the cytoskeleton that lies just beneath the plasma membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton","termid":"GO:0005856"},{"relation_name":"part_of","term_name":"cell cortex","termid":"GO:0005938"}],"gene_count":110,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00113":null,"SJAG_00140":null,"SJAG_00152":null,"SJAG_00185":null,"SJAG_00228":null,"SJAG_00229":null,"SJAG_00268":null,"SJAG_00279":null,"SJAG_00521":null,"SJAG_00649":null,"SJAG_00663":null,"SJAG_00677":null,"SJAG_00700":null,"SJAG_00750":null,"SJAG_00807":null,"SJAG_00845":null,"SJAG_00851":null,"SJAG_00907":null,"SJAG_00920":null,"SJAG_00938":null,"SJAG_00970":null,"SJAG_01114":null,"SJAG_01143":null,"SJAG_01224":null,"SJAG_01268":null,"SJAG_01277":null,"SJAG_01297":null,"SJAG_01370":null,"SJAG_01384":null,"SJAG_01613":null,"SJAG_01665":null,"SJAG_01732":null,"SJAG_01748":null,"SJAG_01787":null,"SJAG_01889":null,"SJAG_01894":null,"SJAG_01964":null,"SJAG_01993":null,"SJAG_02045":null,"SJAG_02075":null,"SJAG_02087":null,"SJAG_02169":null,"SJAG_02177":null,"SJAG_02202":null,"SJAG_02228":null,"SJAG_02245":null,"SJAG_02266":null,"SJAG_02278":null,"SJAG_02282":null,"SJAG_02286":null,"SJAG_02320":null,"SJAG_02336":null,"SJAG_02392":null,"SJAG_02431":null,"SJAG_02511":null,"SJAG_02561":null,"SJAG_02566":null,"SJAG_02626":null,"SJAG_02700":null,"SJAG_02737":null,"SJAG_02831":null,"SJAG_02838":null,"SJAG_02864":null,"SJAG_03011":null,"SJAG_03025":null,"SJAG_03044":null,"SJAG_03073":null,"SJAG_03086":null,"SJAG_03088":null,"SJAG_03119":null,"SJAG_03145":null,"SJAG_03146":null,"SJAG_03374":null,"SJAG_03375":null,"SJAG_03379":null,"SJAG_03380":null,"SJAG_03455":null,"SJAG_03465":null,"SJAG_03564":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_03625":null,"SJAG_03631":null,"SJAG_03681":null,"SJAG_03703":null,"SJAG_03704":null,"SJAG_03887":null,"SJAG_04001":null,"SJAG_04052":null,"SJAG_04077":null,"SJAG_04100":null,"SJAG_04375":null,"SJAG_04461":null,"SJAG_04465":null,"SJAG_04479":null,"SJAG_04498":null,"SJAG_04509":null,"SJAG_04517":null,"SJAG_04597":null,"SJAG_04621":null,"SJAG_04624":null,"SJAG_04644":null,"SJAG_04703":null,"SJAG_04724":null,"SJAG_04781":null,"SJAG_04886":null,"SJAG_04887":null,"SJAG_04982":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005938","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cortical cytoskeleton","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null,"PMID:27059155":null,"PMID:27734801":null,"PMID:28655757":null,"PMID:36148799":null},"termid":"GO:0030863","terms_by_termid":{"GO:0005826":null,"GO:0030478":null,"GO:0030479":null,"GO:0030863":null,"GO:0030981":null,"GO:0032117":null,"GO:0036286":null,"GO:0055028":null,"GO:0110085":null,"GO:0120104":null,"GO:0120105":null,"GO:0120106":null,"GO:1903754":null}}


id: PBO:0056313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase 7","termid":"PBO:0056313"}


id: PBO:0084368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipid-interacting protein in SNARE complex assembly machinery; acts at late step in secretion; interacts with membranes through two distinct binding sites; shows genetic and physical interactions with Sec1p; required for prospore membrane formation during sporulation; N-terminus closely associates with plasma membrane, C-terminus colocalizes with Sec4p on intracellular membranes; relocalizes from bud neck to nucleus upon DNA replication stress","termid":"PBO:0084368"}


id: PBO:0063042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase domain containing paladin 1","termid":"PBO:0063042"}


id: PBO:0091089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MVB sorting pathway protein Ist1","termid":"PBO:0091089"}


id: PBO:0062064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 3 subfamily A member 2","termid":"PBO:0062064"}


id: PBO:0091335
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae PPZ1","termid":"PBO:0091335"}


id: PBO:0055097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2515","termid":"PBO:0055097"}


id: MONDO:0040925
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"yaws","termid":"MONDO:0006019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"latent yaws","secondary_identifiers":["UMLS:C0153240","icd11.foundation:247169608","SCTID:186973005","MEDGEN:509217"],"synonyms":[{"name":"latent yaws","type":"exact"}],"termid":"MONDO:0040925","xrefs":{"Monarch":{"xref_id":"0040925"}}}


id: PBO:0070289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 30","termid":"PBO:0070289"}


id: PBO:0004744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta Nda3","termid":"PBO:0004744"}


id: GO:0098035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The encapsulation of the viral DNA genome within the capsid, which proceeds via cleavage of the viral DNA at specific sites by a viral terminase.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral DNA genome packaging","termid":"GO:0019073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral DNA genome packaging via site-specific sequence recognition","termid":"GO:0098035"}


id: PBO:0047418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and WD repeat domain containing 9","termid":"PBO:0047418"}


id: FYPO:0000004
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_00993:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00993","name":"byr1delta","uniquename":"SJAG_00993:allele-1"},"SJAG_01181:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01181","name":"pek1delta","uniquename":"SJAG_01181:allele-1"},"SJAG_01718:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01718","name":"byr2delta","uniquename":"SJAG_01718:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_02342:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02342","name":"wis1delta","uniquename":"SJAG_02342:allele-1"},"SJAG_02379:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02379","name":"gap1delta","uniquename":"SJAG_02379:allele-1"},"SJAG_02486:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02486","name":"ste6delta","uniquename":"SJAG_02486:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_02923:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02923","name":"spk1delta","uniquename":"SJAG_02923:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03384:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03384","name":"wis4delta","uniquename":"SJAG_03384:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_03581:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03581","name":"gef1delta","uniquename":"SJAG_03581:allele-1"},"SJAG_03753:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03753","name":"mkh1delta","uniquename":"SJAG_03753:allele-1"},"SJAG_04009:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04009","name":"ste11delta","uniquename":"SJAG_04009:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"G788E","gene_uniquename":"SJAG_04280","name":"wee1-G788E","uniquename":"SJAG_04280:allele-2"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"},"SJAG_04777:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04777","name":"win1delta","uniquename":"SJAG_04777:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001489"}],"single_locus_phenotype":[{"annotations":[119043],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0008029"},{"annotations":[118748],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0007701"},{"annotations":[118685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001489"},{"annotations":[119061],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0003976"},{"annotations":[118954,118960,118946,118959,118962,118948,118955,118941,118951,118957,118953,118956,118961,118958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000124"},{"annotations":[118788,118791,118614,118787],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0000648"},{"annotations":[118937,118932,118943,118969],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0002380"},{"annotations":[118790,118789,118796],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0001877"},{"annotations":[118794,118795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006616"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype that consists of the cell's disposition to survive and develop normally.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype","termid":"FYPO:0000136"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00409":null,"SJAG_00514":null,"SJAG_00871":null,"SJAG_00993":null,"SJAG_01181":null,"SJAG_01718":null,"SJAG_01794":null,"SJAG_02013":null,"SJAG_02342":null,"SJAG_02379":null,"SJAG_02486":null,"SJAG_02592":null,"SJAG_02819":null,"SJAG_02923":null,"SJAG_03048":null,"SJAG_03384":null,"SJAG_03453":null,"SJAG_03581":null,"SJAG_03753":null,"SJAG_04009":null,"SJAG_04280":null,"SJAG_04332":null,"SJAG_04464":null,"SJAG_04522":null,"SJAG_04551":null,"SJAG_04697":null,"SJAG_04777":null},"genotype_count":29,"genotypes_by_uniquename":{"byr1delta":{"display_name":"byr1delta","display_uniquename":"byr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00993:allele-1","expression":"Null"}]}]},"byr2delta":{"display_name":"byr2delta","display_uniquename":"byr2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01718:allele-1","expression":"Null"}]}]},"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc2-1w(G146D aa)","display_uniquename":"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03048:allele-1","expression":"Not assayed or wild type"}]}]},"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]},"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"efc25delta":{"display_name":"efc25delta","display_uniquename":"efc25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02819:allele-1","expression":"Null"}]}]},"gap1delta":{"display_name":"gap1delta","display_uniquename":"gap1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02379:allele-1","expression":"Null"}]}]},"gef1delta":{"display_name":"gef1delta","display_uniquename":"gef1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03581:allele-1","expression":"Null"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"gpd1delta":{"display_name":"gpd1delta","display_uniquename":"gpd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00409:allele-1","expression":"Null"}]}]},"mkh1delta":{"display_name":"mkh1delta","display_uniquename":"mkh1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03753:allele-1","expression":"Null"}]}]},"pek1delta":{"display_name":"pek1delta","display_uniquename":"pek1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01181:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]},"pyp1delta":{"display_name":"pyp1delta","display_uniquename":"pyp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02013:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga6delta":{"display_name":"rga6delta","display_uniquename":"rga6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"spk1delta":{"display_name":"spk1delta","display_uniquename":"spk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02923:allele-1","expression":"Null"}]}]},"ste11delta":{"display_name":"ste11delta","display_uniquename":"ste11delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04009:allele-1","expression":"Null"}]}]},"ste6delta":{"display_name":"ste6delta","display_uniquename":"ste6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02486:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-G788E(aa)","display_uniquename":"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]},"win1delta":{"display_name":"win1delta","display_uniquename":"win1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04777:allele-1","expression":"Null"}]}]},"wis1delta":{"display_name":"wis1delta","display_uniquename":"wis1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02342:allele-1","expression":"Null"}]}]},"wis4delta":{"display_name":"wis4delta","display_uniquename":"wis4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03384:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04464","SJAG_00871"],"name":"cell viability","references_by_uniquename":{"PMID:25866389":null,"PMID:28954740":null,"PMID:29566183":null,"PMID:30664646":null,"PMID:31150379":null,"PMID:36058798":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_04551","SJAG_03453","SJAG_01718","SJAG_03384","SJAG_03753","SJAG_04697","SJAG_04009","SJAG_00409","SJAG_02819","SJAG_00993","SJAG_02013","SJAG_04464","SJAG_03048","SJAG_04522","SJAG_00028","SJAG_02342","SJAG_02486","SJAG_04332","SJAG_04777","SJAG_04280","SJAG_02592","SJAG_02379","SJAG_02923","SJAG_01181","SJAG_00514","SJAG_01794","SJAG_03581"],"single_locus_genotype_uniquenames":["pek1delta","gef1delta","rga4delta","win1delta","wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","byr1delta","pmk1delta","gap1delta","gpd1delta","spk1delta","sty1delta","byr2delta","wis4delta","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","ste11delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","gms1delta","pyp1delta","efc25delta","wis1delta","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","scd1delta","scd2delta","ras1delta","ste6delta","rga6delta","mkh1delta"],"termid":"FYPO:0000004","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0000124":null,"FYPO:0000648":null,"FYPO:0001489":null,"FYPO:0001877":null,"FYPO:0002380":null,"FYPO:0003976":null,"FYPO:0006616":null,"FYPO:0007701":null,"FYPO:0008029":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0044150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCCTC-binding factor like","termid":"PBO:0044150"}


id: MONDO:0021746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cystitis","termid":"MONDO:0006032"},{"relation_name":"is_a","term_name":"pyelitis","termid":"MONDO:0006938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"pyelocystitis","secondary_identifiers":["MESH:D053653","UMLS:C0034184","MEDGEN:18778"],"synonyms":[{"name":"Cystopyelitis","type":"related"},{"name":"Pyelocystitis","type":"related"}],"termid":"MONDO:0021746","xrefs":{"Monarch":{"xref_id":"0021746"}}}


id: SO:0001833
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The variable region of an immunoglobulin polypeptide sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin_region","termid":"SO:0001832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"V_region","synonyms":[{"name":"INSDC_feature:V_region","type":"exact"},{"name":"V region","type":"exact"}],"termid":"SO:0001833"}


id: PR:Q9UTC6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An iron-sulfur cluster assembly enzyme ISCU, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10093:SF0","OMA:SCHPO00204","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron sulfur cluster assembly protein 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.13c","secondary_identifiers":["UniProtKB:Q9UTC6"],"synonyms":[{"name":"Spom972h-ISCU","type":"exact"},{"name":"iron sulfur cluster scaffold protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTC6"}


id: MONDO:0957954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic malformation","termid":"MONDO:0019313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphatic malformation 14","secondary_identifiers":["OMIM:620602","UMLS:C5882718","MEDGEN:1851480"],"termid":"MONDO:0957954","xrefs":{"Monarch":{"xref_id":"0957954"}}}


id: GO:0102688
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + dihydrozeatin = H+ + 9-(alpha-D-glucosyl)dihydrozeatin + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydrozeatin UDP glycosyltransferase activity (obsolete GO:0102688)","termid":"GO:0102688"}


id: PBO:0084742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial intermembrane space protein of unknown function; imported via the MIA import machinery; contains an unusual twin cysteine motif (CX13C CX14C)","termid":"PBO:0084742"}


id: PBO:0039759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APPBP2 divergent transcript","termid":"PBO:0039759"}


id: PBO:0040063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPIN-AP3S2 readthrough","termid":"PBO:0040063"}


id: GO:1905445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of clathrin coat assembly.","definition_xrefs":["GOC:PARL","GO_REF:0000058","PMID:15533940","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of clathrin coat assembly","termid":"GO:1905443"},{"relation_name":"positively_regulates","term_name":"clathrin coat assembly","termid":"GO:0048268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of clathrin coat assembly","synonyms":[{"name":"activation of clathrin cage assembly","type":"narrow"},{"name":"activation of clathrin coat assembly","type":"narrow"},{"name":"positive regulation of clathrin cage assembly","type":"exact"},{"name":"up regulation of clathrin cage assembly","type":"exact"},{"name":"up regulation of clathrin coat assembly","type":"exact"},{"name":"up-regulation of clathrin cage assembly","type":"exact"},{"name":"up-regulation of clathrin coat assembly","type":"exact"},{"name":"upregulation of clathrin cage assembly","type":"exact"},{"name":"upregulation of clathrin coat assembly","type":"exact"}],"termid":"GO:1905445"}


id: PBO:0055679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase H","termid":"PBO:0055679"}


id: MONDO:0006104
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carotid body paraganglioma that is confined to the site of origin, without metastatic potential.","definition_xrefs":["NCIT:C79950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign endocrine neoplasm","termid":"MONDO:0000627"},{"relation_name":"is_a","term_name":"carotid body paraganglioma","termid":"MONDO:0021053"},{"relation_name":"is_a","term_name":"benign blood vessel neoplasm","termid":"MONDO:0024286"},{"relation_name":"is_a","term_name":"benign neoplasm of peripheral nervous system","termid":"MONDO:0056804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign carotid body paraganglioma","secondary_identifiers":["MEDGEN:396868","UMLS:C2698359","EFO:1000108"],"synonyms":[{"name":"benign carotid body paraganglioma","type":"exact"},{"name":"benign chemodectoma","type":"related"},{"name":"carotid body paraganglioma, benign","type":"exact"},{"name":"chemodectoma, benign","type":"related"}],"termid":"MONDO:0006104","xrefs":{"Monarch":{"xref_id":"0006104"}}}


id: PBO:0109379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 10","termid":"PBO:0109379"}


id: PBO:0030220
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_guanosine-diphosphatase_activity","termid":"PBO:0030220"}


id: GO:0018900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dichloromethane, a dichlorinated derivative of methane. It is a colorless organic liquid with a sweet, chloroform-like odor, often used as a paint remover.","definition_xrefs":["UM-BBD_pathwayID:dcm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogenated hydrocarbon metabolic process","termid":"GO:0042197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dichloromethane metabolic process","synonyms":[{"name":"dichloromethane metabolism","type":"exact"}],"termid":"GO:0018900"}


id: PBO:0085151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleoside triphosphate pyrophosphohydrolase; active against various substrates including ITP, dITP and XTP; mediates exclusion of non canonical purines, pyrimidines from dNTP pools; functions with YJL055W to mediate resistance to 5-FU; specifically reduces the incorporation of 5-FU into RNA without affecting uptake or incorporation of uracil into RNA; protein abundance increases in response to DNA replication stress; yeast HAM1 can complement knockdown of human homolog ITPA","termid":"PBO:0085151"}


id: GO:0017099
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a very-long-chain 2,3-saturated fatty acyl-CoA + H+ + oxidized [electron-transfer flavoprotein] = a very-long-chain (2E)-enoyl-CoA + reduced [electron-transfer flavoprotein]. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons.","definition_xrefs":["RHEA:19181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA dehydrogenase activity","termid":"GO:0003995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"very-long-chain fatty acyl-CoA dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-548831","EC:1.3.8.9","MetaCyc:RXN-13451"],"synonyms":[{"name":"very long-chain-acyl-CoA dehydrogenase activity","type":"exact"},{"name":"very-long-chain acyl-CoA dehydrogenase activity","type":"exact"}],"termid":"GO:0017099"}


id: FYPO:0005488
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to arsenite ions. Cells stop growing (and may die) at a concentration of arsenite that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to arsenic","termid":"FYPO:0000093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to arsenite","synonyms":[{"name":"hypersensitive to arsenite","type":"exact"},{"name":"sensitive to arsenite during mitotic cell cycle","type":"related"},{"name":"sensitive to arsenite during vegetative growth","type":"exact"},{"name":"sensitive to arsenite ions","type":"exact"}],"termid":"FYPO:0005488"}


id: GO:1990842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis in the embryo or fetus during pregnancy.","definition_xrefs":["PMID:22738222"],"gene_count":0,"genotype_count":0,"name":"obsolete response to prenatal stress (obsolete GO:1990842)","synonyms":[{"name":"response to PNS","type":"exact"}],"termid":"GO:1990842"}


id: GO:0071427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a ribonucleoprotein complex that contains messenger RNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA-containing ribonucleoprotein complex export from nucleus (obsolete GO:0071427)","synonyms":[{"name":"mRNA-containing RNP export from nucleus","type":"exact"},{"name":"mRNA-containing ribonucleoprotein complex export from cell nucleus","type":"exact"},{"name":"mRNA-containing ribonucleoprotein complex nucleus export","type":"exact"},{"name":"mRNA-containing ribonucleoprotein complex transport from nucleus to cytoplasm","type":"exact"}],"termid":"GO:0071427"}


id: PBO:0042153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 15","termid":"PBO:0042153"}


id: MONDO:1012107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyperkinesis, non-human animal","termid":"MONDO:1011626"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperkinesis, dog","secondary_identifiers":["OMIA:000503-9615"],"termid":"MONDO:1012107","xrefs":{"Monarch":{"xref_id":"1012107"}}}


id: MONDO:1011857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive cerebellar abiotrophy, non-human animal","secondary_identifiers":["OMIA:000826"],"termid":"MONDO:1011857","xrefs":{"Monarch":{"xref_id":"1011857"}}}


id: GO:0031820
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a P2Y11 nucleotide receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled nucleotide receptor binding","termid":"GO:0031811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"P2Y11 nucleotide receptor binding","synonyms":[{"name":"P2Y11 nucleotide receptor ligand","type":"narrow"}],"termid":"GO:0031820"}


id: PBO:0039007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFF2 intronic transcript 1","termid":"PBO:0039007"}


id: PBO:0046624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 5","termid":"PBO:0046624"}


id: SO:0001638
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes for an piwi associated RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sncRNA_gene","termid":"SO:0002342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piRNA_gene","synonyms":[{"name":"piRNA gene","type":"exact"}],"termid":"SO:0001638"}


id: PBO:0089407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, membrane-tethered","termid":"PBO:0089407"}


id: PBO:0028428
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_pyridoxine","termid":"PBO:0028428"}


id: MONDO:0013550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal myopathy with posterior leg and anterior hand involvement, also named distal ABD-filaminopathy, is a neuromuscular disease characterized by a progressive symmetric muscle weakness of anterior upper and posterior lower limbs.","definition_xrefs":["Orphanet:63273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant distal myopathy","termid":"MONDO:0016108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0000426"],"is_obsolete":false,"name":"distal myopathy with posterior leg and anterior hand involvement","secondary_identifiers":["SCTID:733489002","DOID:0111190","OMIM:614065","UMLS:C3279722","GARD:16666","MEDGEN:481352"],"synonyms":[{"name":"MPD4","type":"related"},{"name":"Williams distal myopathy","type":"related"},{"name":"distal ABD-filaminopathy","type":"exact"},{"name":"myopathy, distal, 4","type":"related"},{"name":"myopathy, distal, type 4","type":"exact"}],"termid":"MONDO:0013550","xrefs":{"Monarch":{"xref_id":"0013550"}}}


id: GO:0035949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of gluconeogenesis by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","PMID:17875938"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of gluconeogenesis by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:0035949)","synonyms":[{"name":"positive regulation of gluconeogenesis by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of gluconeogenesis by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of gluconeogenesis by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of gluconeogenesis by inhibition of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of gluconeogenesis by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthesis by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthesis by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthesis by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthesis by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthesis by negative regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of glucose biosynthetic process by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthetic process by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthetic process by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthetic process by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthetic process by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0035949"}


id: PBO:0070214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 144 pseudogene","termid":"PBO:0070214"}


id: GO:1903511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving orotic acid.","definition_xrefs":["PMID:10727948","GOC:TermGenie","GO_REF:0000068","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound metabolic process","termid":"GO:0072527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"orotic acid metabolic process","synonyms":[{"name":"orotic acid metabolism","type":"exact"}],"termid":"GO:1903511"}


id: FYPO:0005749
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins occurs to a lower extent than normal when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation","termid":"FYPO:0002679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"decreased protein phosphorylation during glucose starvation","synonyms":[{"name":"decreased protein phosphorylation during glucose depletion","type":"exact"},{"name":"decreased protein phosphorylation during glucose deprivation","type":"exact"},{"name":"decreased protein phosphorylation during glucose limitation","type":"related"},{"name":"reduced protein phosphorylation during glucose starvation","type":"exact"}],"termid":"FYPO:0005749"}


id: PBO:0051176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-64D","termid":"PBO:0051176"}


id: PBO:0064310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteolipid protein 2","termid":"PBO:0064310"}


id: MONDO:0002522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tumor usually arising in the synovium of joints, bursa or tendon sheath. It is characterized by the presence of mononuclear cells, multinucleated osteoclast-like giant cells, hemosiderin-laden macrophages, foam cells, and an inflammatory infiltrate. According to the growth pattern, it is classified as localized or diffuse.","definition_xrefs":["NCIT:C3402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"giant cell tumor","termid":"MONDO:0002171"},{"relation_name":"is_a","term_name":"synovium neoplasm","termid":"MONDO:0002528"},{"relation_name":"is_a","term_name":"connective tissue neoplasm","termid":"MONDO:0021581"},{"relation_name":"is_a","term_name":"tendon sheath disorder","termid":"MONDO:0024876"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tenosynovial giant cell tumor","secondary_identifiers":["ICD9:727.89","UMLS:C1318543","DOID:314","ICDO:9252/0","SCTID:95412009","SCTID:310605004","EFO:1000562","ICD9:727.02","MEDGEN:232927"],"synonyms":[{"name":"fibrous histiocytoma of tendon sheath","type":"exact"},{"name":"giant cell neoplasm of Tenosynovium","type":"exact"},{"name":"giant cell neoplasm of tendon sheath","type":"exact"},{"name":"giant cell neoplasm of the Tenosynovium","type":"exact"},{"name":"giant cell tumor of Tenosynovium","type":"exact"},{"name":"giant cell tumor of tendon sheath","type":"exact"},{"name":"giant cell tumor of the Tenosynovium","type":"exact"},{"name":"giant cell tumour of Tenosynovium","type":"exact"},{"name":"giant cell tumour of tendon sheath","type":"exact"},{"name":"giant cell tumour of the Tenosynovium","type":"exact"},{"name":"tendon sheath giant cell neoplasm","type":"exact"},{"name":"tendon sheath giant cell tumor","type":"exact"},{"name":"tendon sheath giant cell tumour","type":"exact"},{"name":"tenosynovial giant cell neoplasm","type":"exact"},{"name":"tenosynovial giant cell tumor","type":"exact"}],"termid":"MONDO:0002522","xrefs":{"Monarch":{"xref_id":"0002522"}}}


id: GO:0051843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process, either active or passive, by which an organism avoids or tolerates the effects of a symbiont organism's defense response. The symbiont defense response is mounted by the symbiont in response to the presence of the organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete evasion or tolerance of symbiont defense response (obsolete GO:0051843)","synonyms":[{"name":"evasion of symbiont defence response","type":"exact"},{"name":"evasion or tolerance of symbiont defense response","type":"exact"}],"termid":"GO:0051843"}


id: FYPO:0007758
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid cohesion lasts longer than normal, continuing into anaphase of mitosis.","definition_xrefs":["PMID:33888556","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid cohesion","termid":"FYPO:0006521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0000641","FYPO:0001320"],"is_obsolete":false,"name":"increased duration of mitotic sister chromatid cohesion","synonyms":[{"name":"ectopic cohesion protection during mitosis","type":"related"},{"name":"increased duration of mitotic chromosome cohesion","type":"exact"},{"name":"increased duration of mitotic sister chromatid cohesion during mitotic anaphase","type":"exact"},{"name":"increased duration of mitotic sister chromatid cohesion during mitotic cell cycle","type":"related"},{"name":"increased duration of mitotic sister chromatid cohesion during vegetative growth","type":"exact"},{"name":"persistent mitotic sister chromatid cohesion during mitotic anaphase","type":"exact"},{"name":"prolonged mitotic sister chromatid cohesion","type":"exact"}],"termid":"FYPO:0007758"}


id: FYECO:0000004
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03198:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03198","name":"oar2delta","uniquename":"SJAG_03198:allele-1"},"SJAG_03198:allele-2":{"allele_type":"amino_acid_mutation","description":"Y189D cold sensitive","gene_uniquename":"SJAG_03198","name":"oar2-51","uniquename":"SJAG_03198:allele-2"},"SJAG_03198:allele-3":{"allele_type":"amino_acid_mutation","description":"R72A,L75A,R106A,L109A","gene_uniquename":"SJAG_03198","name":"oar2-dm12","synonyms":[{"name":"destruction box mutations","reference":"PMID:23786411","type":"exact"}],"uniquename":"SJAG_03198:allele-3"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_03892:allele-3":{"allele_type":"amino_acid_mutation","description":"I307T L327S","gene_uniquename":"SJAG_03892","name":"vps4-ts","uniquename":"SJAG_03892:allele-3"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[118748,118843,118844,118744,118654,118655,118656,119073,119072,118595,118607,119039,119059,118790,119060,119074,118787,119061,119084,118658,118659,118660,118662,118651,118652,118653,119057,119064,119065,119071,119075,118657,118648,118649,118650],"is_not":false,"summary":null,"term":"FYECO:0000004"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"The experiment was performed, or cells were grown, at a high temperature (typically exceeding ~32 degrees Celsius).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00426":null,"SJAG_00871":null,"SJAG_01745":null,"SJAG_01946":null,"SJAG_01956":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03198":null,"SJAG_03351":null,"SJAG_03575":null,"SJAG_03596":null,"SJAG_03892":null,"SJAG_04312":null,"SJAG_04332":null,"SJAG_04464":null,"SJAG_04697":null,"SJAG_05207":null},"genotype_count":19,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__cem1delta":{"display_name":"apc2-361(E548K ts) cem1delta","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__cem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01946:allele-1","expression":"Null"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts) oar2-51(Y189D cold sensitive)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-2","expression":"Not assayed or wild type"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression":{"display_name":"apc2-361(E548K ts) oar2-dm12(R72A,L75A,R106A,L109A aa)[Overexpression]","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-3","expression":"Overexpression"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2delta":{"display_name":"apc2-361(E548K ts) oar2delta","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-1","expression":"Null"}]}]},"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc15-A(L264P,P442T aa)","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]}]},"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc2-1w(G146D aa)","display_uniquename":"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03048:allele-1","expression":"Not assayed or wild type"}]}]},"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]},"cmp7delta__vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cmp7delta vps4-ts(I307T L327S aa)","display_uniquename":"cmp7delta__vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-3","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"vps4-ts(I307T L327S aa)","display_uniquename":"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-3","expression":"Not assayed or wild type"}]}]}},"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03575","SJAG_01946","SJAG_03892","SJAG_05207","SJAG_04464","SJAG_03198","SJAG_00871"],"name":"high temperature","references_by_uniquename":{"PMID:23786411":null,"PMID:25318672":null,"PMID:25866389":null,"PMID:27678009":null,"PMID:28954740":null,"PMID:30664646":null,"PMID:31150379":null,"PMID:32109380":null,"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_00426","SJAG_04697","SJAG_00266","SJAG_02592","SJAG_04464","SJAG_04312","SJAG_04332","SJAG_03351","SJAG_03596","SJAG_03892","SJAG_03575","SJAG_03048","SJAG_01956"],"single_locus_genotype_uniquenames":["gms1delta","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","pka1delta","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","atf1delta","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","sty1delta"],"synonyms":[{"name":"33 degrees Celsius","type":"narrow"},{"name":"34 degrees Celsius","type":"narrow"},{"name":"35 degrees Celsius","type":"narrow"},{"name":"36 degrees Celsius","type":"narrow"},{"name":"37 degrees Celsius","type":"narrow"},{"name":"38 degrees Celsius","type":"narrow"},{"name":"39 degrees Celsius","type":"narrow"},{"name":"40 degrees Celsius","type":"narrow"},{"name":"41 degrees Celsius","type":"related"},{"name":"42 degrees Celsius","type":"related"},{"name":"43 degrees Celsius","type":"related"}],"termid":"FYECO:0000004","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: MONDO:0045033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mycosis that arises from infection in an immunologically compromised host and is systemic.","direct_ancestors":[{"relation_name":"is_a","term_name":"systemic mycosis","termid":"MONDO:0000256"},{"relation_name":"is_a","term_name":"opportunistic mycosis","termid":"MONDO:0002312"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opportunistic systemic mycosis","termid":"MONDO:0045033","xrefs":{"Monarch":{"xref_id":"0045033"}}}


id: PBO:0042529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 5","termid":"PBO:0042529"}


id: GO:0047012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NAD(P)+ + 3-beta-hydroxy-4-alpha-methyl-5-alpha-cholest-7-ene-4-beta-carboxylate = NAD(P)H + H+ + CO2 + 4-alpha-methyl-5-alpha-cholest-7-en-3-one.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity (obsolete GO:0047012)","synonyms":[{"name":"3-beta-hydroxy-4-alpha-methylcholestenecarboxylate 3-dehydrogenase (decarboxylating) activity","type":"exact"}],"termid":"GO:0047012"}


id: PBO:0079414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 8 class VIII pseudogene 8","termid":"PBO:0079414"}


id: MONDO:0016316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mucopolysaccharidosis type 2, attenuated form (MPS2att), the less severe form of MPS2, leads to a massive accumulation of glycosaminoglycans and a wide variety of symptoms including distinctive facies, short stature, cardiorespiratory and skeletal findings. It is differentiated from mucopolysaccharidosis type 2, severe form by the absence of cognitive decline.","definition_xrefs":["Orphanet:217093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis type 2","termid":"MONDO:0010674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"mucopolysaccharidosis type 2, attenuated form","secondary_identifiers":["MEDGEN:1826165","NANDO:2201172","NANDO:1200099","SCTID:5667009","GARD:17119","NANDO:2201171","UMLS:C5679815"],"synonyms":[{"name":"Hunter syndrome type B","type":"exact"},{"name":"MPS2B","type":"exact"},{"name":"MPSIIB","type":"exact"},{"name":"iduronate 2-sulfatase deficiency type B","type":"exact"},{"name":"mucopolysaccharidosis type 2, attenuated form","type":"exact"},{"name":"mucopolysaccharidosis type 2B","type":"exact"},{"name":"mucopolysaccharidosis type II, attenuated form","type":"exact"},{"name":"mucopolysaccharidosis type IIB","type":"exact"}],"termid":"MONDO:0016316","xrefs":{"Monarch":{"xref_id":"0016316"}}}


id: GO:0030879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk. Its development starts with the formation of the mammary line and ends as the mature gland cycles between nursing and weaning stages.","definition_xrefs":["PMID:9576833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland development","synonyms":[{"name":"mammogenesis","type":"narrow"}],"termid":"GO:0030879"}


id: MOD:00302
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(phosphoglycosyl-D-mannose-1-phosphoryl)-L-serine.","definition_xrefs":["PubMed:15649890","PubMed:10037765","RESID:AA0297","Unimod:429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"glycosylphosphorylated residue","termid":"MOD:01804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-(phosphoglycosyl-D-mannose-1-phosphoryl)-L-serine","synonyms":[{"name":"CARBOHYD O-linked (Man1P) serine","type":"exact"},{"name":"O-(D-mannose-1-phosphoryl)-L-serine","type":"exact"},{"name":"O-(alpha-D-mannosyl-1-phosphoryl)-L-serine","type":"exact"},{"name":"O-[alpha-D-mannopyranosyloxy(hydroxy)phosphoryl]-L-serine","type":"exact"},{"name":"O3-(D-mannose-1-phosphoryl)-L-serine","type":"exact"},{"name":"O3-L-serine alpha-D-mannopyranose 1-phosphodiester","type":"exact"},{"name":"PhosphoHex","type":"related"},{"name":"phosphoglycosyl-D-mannose-1-phosphoryl","type":"related"}],"termid":"MOD:00302"}


id: GO:0034862
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,6-dihydroxybenzothiazole + 1/2 O2 = 2,6,7-trihydroxybenzothiazole.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,6-dihydroxybenzothiazole monooxygenase activity (obsolete GO:0034862)","termid":"GO:0034862"}


id: PBO:0042083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 150","termid":"PBO:0042083"}


id: PBO:0089934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone demethylase H3-K36 specific, Lid2 complex subunit Jmj3","termid":"PBO:0089934"}


id: MONDO:0013507
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic granulomatous disease","termid":"MONDO:0018305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"granulomatous disease, chronic, autosomal recessive, cytochrome b-positive, type 3","secondary_identifiers":["MEDGEN:462759","UMLS:C3151409","DOID:0070194","NANDO:2201283","OMIM:613960","GARD:15736"],"synonyms":[{"name":"CDG3","type":"related"},{"name":"CGD, autosomal recessive cytochrome B-positive, type 3","type":"related"},{"name":"chronic granulomatous disease 3, autosomal recessive","type":"exact"},{"name":"granulomatous disease, chronic, autosomal recessive, cytochrome b-POSITIVE, type III","type":"related"},{"name":"granulomatous disease, chronic, autosomal recessive, cytochrome b-positive, type 3","type":"exact"},{"name":"granulomatous disease, chronic, due to Ncf4 deficiency","type":"related"}],"termid":"MONDO:0013507","xrefs":{"Monarch":{"xref_id":"0013507"}}}


id: PBO:0034526
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_recombination_at_hotspot","termid":"PBO:0034526"}


id: PBO:0030383
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-slow_vegetative_cell_population_growth","termid":"PBO:0030383"}


id: GO:1901816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-zeacarotene.","definition_xrefs":["PMID:3710717","UniPathway:UPA00805","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid metabolic process","termid":"GO:0016116"},{"relation_name":"is_a","term_name":"carotene metabolic process","termid":"GO:0016119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"beta-zeacarotene metabolic process","synonyms":[{"name":"beta-zeacarotene metabolism","type":"exact"}],"termid":"GO:1901816"}


id: PBO:0059010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MME antisense RNA 1","termid":"PBO:0059010"}


id: PBO:0087858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator involved in adaptation to weak acid stress; activates transcription of TPO2, YRO2, and other genes encoding membrane stress proteins; HAA1 has a paralog, CUP2, that arose from the whole genome duplication; relocalizes from cytoplasm to nucleus upon DNA replication stress","termid":"PBO:0087858"}


id: PBO:0027698
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mRNA_absent_from_cell","termid":"PBO:0027698"}


id: GO:0047564
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxycyclohexanone + A = AH(2) + cyclohexane-1,3-dione.","definition_xrefs":["EC:1.1.99.26","RHEA:15905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3-hydroxycyclohexanone dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03212","MetaCyc:3-HYDROXYCYCLOHEXANONE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"3-hydroxycyclohexanone:acceptor 1-oxidoreductase activity","type":"related"}],"termid":"GO:0047564"}


id: GO:0072721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dithiothreitol stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to dithiothreitol","termid":"GO:0072720"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dithiothreitol","synonyms":[{"name":"cellular response to 1,4-dithiothreitol","type":"exact"},{"name":"cellular response to DTT","type":"exact"}],"termid":"GO:0072721"}


id: GO:1900529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of cell shape that is involved in cellular response to glucose starvation.","definition_xrefs":["GOC:TermGenie","PMID:9135147","GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell shape involved in cellular response to glucose starvation (obsolete GO:1900529)","synonyms":[{"name":"regulation of cell shape involved in cellular response to glucose starvation","type":"exact"}],"termid":"GO:1900529"}


id: PBO:0062585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily G member 9","termid":"PBO:0062585"}


id: MONDO:0019504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Superior limbic keratoconjunctivitis (SLK) is a chronic and recurrent eye disease which affects thesuperior bulbar conjunctiva (the clear layer that covers the eyeball, over the sclera) and tarsal conjunctiva (the clear layer that lines the eyelids), as well as the superior limbic aspect of the cornea (the area above the cornea). It is commonly found in women 20-70 years of age. The signs and symptoms include burning, redness and irritation and tend to develop slowly over a period of 1 to 10 years.Vision usually remains intact. While the underlying cause ofSLK remains unknown, it is believed that the condition issecondary to superior bulbar conjunctiva laxity. Factors inducing conjunctiva laxity include thyroid eye disease (usually hyperthyroidism), tight upper eyelids, and prominent globes. A mimicking disorder has been encountered in soft contact lens (SCL) wearers, typically with exposure to thimerosal-preserved solutions. Treatment of SLK may involve the use of various medications, surgery, or a combination of both.","direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"superior limbic keratoconjunctivitis","secondary_identifiers":["icd11.foundation:1532846455","ICD9:370.49","SCTID:231903005","ICD10CM:H16.2","Orphanet:88633","UMLS:C0339229","GARD:10940","MEDGEN:573037"],"synonyms":[{"name":"SLK","type":"exact"},{"name":"Theodore's superior limbic keratoconjunctivitis","type":"exact"},{"name":"Theodore's syndrome","type":"exact"},{"name":"Theodores superior limbic keratoconjunctivitis","type":"related"},{"name":"Theodores syndrome","type":"related"}],"termid":"MONDO:0019504","xrefs":{"Monarch":{"xref_id":"0019504"}}}


id: GO:0050276
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-amino-1-deoxy-scyllo-inositol + ATP = 1-amino-1-deoxy-scyllo-inositol 4-phosphate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.65","RHEA:18605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"scyllo-inosamine 4-kinase activity","secondary_identifiers":["KEGG_REACTION:R03384","MetaCyc:SCYLLO-INOSAMINE-KINASE-RXN"],"synonyms":[{"name":"ATP:1-amino-1-deoxy-scyllo-inositol 4-phosphotransferase activity","type":"related"},{"name":"ATP:inosamine phosphotransferase activity","type":"related"},{"name":"scyllo-inosamine kinase (phosphorylating)","type":"related"},{"name":"scyllo-inosamine kinase activity","type":"exact"}],"termid":"GO:0050276"}


id: PBO:0061465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor binding factor 2","termid":"PBO:0061465"}


id: MONDO:0003482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A infectious disease involving the Pediculus humanus corporis.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lice infestation","termid":"MONDO:0003472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Pediculus humanus corporis infestation","secondary_identifiers":["MEDGEN:508023","DOID:5513","UMLS:C0030758","ICD9:132.1","SCTID:25188002"],"synonyms":[{"name":"Pediculus corporis","type":"exact"},{"name":"Pediculus corporis [body louse]","type":"exact"},{"name":"Pediculus humanus corporis infection","type":"exact"},{"name":"Pediculus humanus infestation","type":"exact"},{"name":"body louse infestation","type":"exact"},{"name":"infections, Pediculus humanus corporis","type":"related"}],"termid":"MONDO:0003482","xrefs":{"Monarch":{"xref_id":"0003482"}}}


id: MONDO:0001386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Clinical or subclinical disturbances of cortical function due to a sudden, abnormal, excessive, and disorganized discharge of brain cells. Clinical manifestations include abnormal motor, sensory and psychic phenomena. Recurrent seizures are usually referred to as epilepsy or 'seizure disorder.'","definition_xrefs":["MESH:D012640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visual cortex disorder","termid":"MONDO:0003584"},{"relation_name":"is_a","term_name":"reflex epilepsy","termid":"MONDO:0017768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"visual epilepsy","secondary_identifiers":["UMLS:C0270824","DOID:11832","MEDGEN:75723","SCTID:39194005","NCIT:C3980"],"synonyms":[{"name":"epilepsy, visual","type":"exact"}],"termid":"MONDO:0001386","xrefs":{"Monarch":{"xref_id":"0001386"}}}


id: GO:0006390
data:
  {"annotated_genes":["SJAG_04030","SJAG_03578","SJAG_01713","SJAG_03014","SJAG_03144","SJAG_00634","SJAG_00637","SJAG_04934","SJAG_03289"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58604,60767,62069,63734,63787,66379,86893],"is_not":false,"summary":null,"term":"GO:0006390"},{"annotations":[97672,86895,94619],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006391"}]},"cv_name":"biological_process","definition":"The synthesis of RNA from a mitochondrial DNA template, usually by a specific mitochondrial RNA polymerase.","definition_xrefs":["GOC:jl","PMID:23632312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA metabolic process","termid":"GO:0000959"},{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"},{"relation_name":"part_of","term_name":"mitochondrial gene expression","termid":"GO:0140053"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00634":null,"SJAG_00637":null,"SJAG_01713":null,"SJAG_03014":null,"SJAG_03144":null,"SJAG_03289":null,"SJAG_03578":null,"SJAG_04030":null,"SJAG_04934":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351","GO:0140053"],"is_obsolete":false,"name":"mitochondrial transcription","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["Reactome:R-HSA-75944"],"synonyms":[{"name":"transcription from mitochondrial promoter","type":"exact"}],"termid":"GO:0006390","terms_by_termid":{"GO:0006390":null,"GO:0006391":null}}


id: MOD:01139
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dioctyl phthalate sodium adduct","termid":"MOD:01139"}


id: FYPO:0001060
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of glutamate into the cell occurs to a lower extent than normal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glutamate import during vegetative growth","termid":"FYPO:0001059"},{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"},{"relation_name":"is_a","term_name":"decreased glutamate import","termid":"FYPO:0001649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased glutamate import during vegetative growth","synonyms":[{"name":"decreased L-glutamate import across plasma membrane during vegetative growth","type":"exact"},{"name":"decreased L-glutamate import during vegetative growth","type":"exact"},{"name":"decreased glutamate import during mitotic cell cycle","type":"related"},{"name":"decreased glutamate import into cell during vegetative growth","type":"exact"},{"name":"decreased glutamate uptake during vegetative growth","type":"exact"},{"name":"reduced glutamate import during vegetative growth","type":"exact"}],"termid":"FYPO:0001060"}


id: MONDO:0017528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polydactyly of an index finger","termid":"MONDO:0008271"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly of an index finger, bilateral","secondary_identifiers":["Orphanet:295154","MEDGEN:1727346","UMLS:C5438861","icd11.foundation:806174152"],"synonyms":[{"name":"preaxial polydactyly type 3, bilateral","type":"exact"}],"termid":"MONDO:0017528","xrefs":{"Monarch":{"xref_id":"0017528"}}}


id: PBO:0042966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 4","termid":"PBO:0042966"}


id: PBO:0068491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 75, pseudogene","termid":"PBO:0068491"}


id: GO:0004021
data:
  {"annotated_genes":["SJAG_04145"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110726],"is_not":false,"summary":null,"term":"GO:0004021"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-alanine = L-glutamate + pyruvate.","definition_xrefs":["RHEA:19453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine-oxo-acid transaminase activity","termid":"GO:0047635"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016769"],"is_obsolete":false,"name":"L-alanine:2-oxoglutarate aminotransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-507775","Reactome:R-HSA-70523","Reactome:R-HSA-70524","Reactome:R-HSA-507749","EC:2.6.1.2","KEGG_REACTION:R00258","MetaCyc:ALANINE-AMINOTRANSFERASE-RXN"],"synonyms":[{"name":"ALT","type":"related"},{"name":"GPT","type":"related"},{"name":"L-alanine aminotransferase activity","type":"broad"},{"name":"L-alanine transaminase activity","type":"broad"},{"name":"L-alanine-alpha-ketoglutarate aminotransferase activity","type":"related"},{"name":"alanine aminotransferase activity","type":"broad"},{"name":"alanine transaminase activity","type":"broad"},{"name":"alanine-alpha-ketoglutarate aminotransferase activity","type":"related"},{"name":"alanine-pyruvate aminotransferase activity","type":"related"},{"name":"beta-alanine aminotransferase","type":"broad"},{"name":"glutamic acid-pyruvic acid transaminase activity","type":"related"},{"name":"glutamic--alanine transaminase activity","type":"related"},{"name":"glutamic--pyruvic transaminase activity","type":"related"},{"name":"glutamic-pyruvic aminotransferase activity","type":"related"},{"name":"pyruvate transaminase activity","type":"broad"},{"name":"pyruvate-alanine aminotransferase activity","type":"related"},{"name":"pyruvate-glutamate transaminase activity","type":"related"}],"termid":"GO:0004021","terms_by_termid":{"GO:0004021":null}}


id: PBO:0090627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDA1 family protein","termid":"PBO:0090627"}


id: PBO:0005170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 reductase (predicted)","termid":"PBO:0005170"}


id: PBO:0066127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras association domain family member 6","termid":"PBO:0066127"}


id: PBO:0004566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase Pus2 (predicted)","termid":"PBO:0004566"}


id: GO:0052570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of reactive oxygen species produced as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete response to defense-related symbiont reactive oxygen species production (obsolete GO:0052570)","synonyms":[{"name":"response to defense-related symbiont reactive oxygen species production","type":"exact"}],"termid":"GO:0052570"}


id: PBO:0062006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily I member 1 pseudogene","termid":"PBO:0062006"}


id: PBO:0046212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 5","termid":"PBO:0046212"}


id: PBO:0071957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS5 pseudogene 7","termid":"PBO:0071957"}


id: MONDO:0011851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"headache disorder","termid":"MONDO:0021146"},{"relation_name":"is_a","term_name":"migraine with or without aura, susceptibility to","termid":"MONDO:0100246"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine with or without aura, susceptibility to, 6","secondary_identifiers":["MEDGEN:334829","MESH:C564385","UMLS:C1843765","OMIM:607516"],"synonyms":[{"name":"MGR6","type":"related"},{"name":"migraine with or without aura, susceptibility to, 6","type":"exact"},{"name":"migraine with or without aura, susceptibility to, type 6","type":"exact"},{"name":"migraine, familial hemiplegic, 4","type":"related"}],"termid":"MONDO:0011851","xrefs":{"Monarch":{"xref_id":"0011851"}}}


id: PBO:0055471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2904","termid":"PBO:0055471"}


id: PBO:0073786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 5 member 6","termid":"PBO:0073786"}


id: PBO:0027375
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_arrest_with_condensed_chromosomes,_septated_cell_with_1C_DNA_content_per_nucleus","termid":"PBO:0027375"}


id: PBO:0047295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acyl-CoA reductase 2 pseudogene 2","termid":"PBO:0047295"}


id: PBO:0071653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 17","termid":"PBO:0071653"}


id: MONDO:0008870
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microcephalic primordial dwarfism, Montreal type is a rare, genetic multiple congenital anomalies/dysmorphic syndrome characterized by severe short stature and craniofacial dysmorphism (microcephaly, narrow face with flat cheeks, ptosis, prominent nose with a convex ridge, low-set ears with small or absent lobes, high-arched/cleft palate, micrognathia), associated with premature graying and loss of scalp hair, redundant, dry and wrinkled skin of the palms, premature senility and varying degrees of intellectual disability. Cryptorchidism and skeletal anomalies may also be observed. There have been no further descriptions in the literature since 1970.","definition_xrefs":["Orphanet:2617"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bird headed-dwarfism, Montreal type","secondary_identifiers":["UMLS:C1859468","MEDGEN:347890","OMIM:210700","GARD:895","MESH:C535448"],"synonyms":[{"name":"Bird-headed dwarfism with features of premature senility","type":"related"},{"name":"Bird-headed dwarfism, Montreal type","type":"related"},{"name":"microcephalic primordial dwarfism, Montreal type","type":"related"},{"name":"premature senility, premature graying and loss of scalp hair and wrinkled skin of the palms","type":"related"},{"name":"premature senility, premature greying and loss of scalp hair and wrinkled skin of the palms","type":"related"}],"termid":"MONDO:0008870","xrefs":{"Monarch":{"xref_id":"0008870"}}}


id: FYPO:0001557
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of ethionine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0002682","FYPO:0000139"],"is_obsolete":false,"name":"resistance to ethionine","synonyms":[{"name":"resistance to DL-ethionine","type":"related"},{"name":"resistance to S-ethylhomocysteine","type":"exact"},{"name":"resistance to ethionine during mitotic cell cycle","type":"related"},{"name":"resistance to ethionine during vegetative growth","type":"exact"},{"name":"resistant to ethionine","type":"exact"}],"termid":"FYPO:0001557"}


id: PR:Q9P7L6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A methyltransferase-like protein 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized methyltransferase-like protein SPBC21C3.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.07c","secondary_identifiers":["UniProtKB:Q9P7L6"],"synonyms":[{"name":"Spom972h-METTL8","type":"exact"}],"termid":"PR:Q9P7L6"}


id: PBO:0051424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-1","termid":"PBO:0051424"}


id: GO:0005186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of binding to and activating specific cell surface receptors, thereby inducing behavioral, developmental, or physiological response(s) from a responding organism or cell. The substance may be released or retained on the cell surface. Pheromones may serve as a specific attractant, social communicator, or sexual stimulant.","definition_xrefs":["GOC:sgd_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor ligand activity","termid":"GO:0048018"}],"gene_count":0,"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0140677","GO:0098772","GO:0005515"],"is_obsolete":false,"name":"pheromone activity","termid":"GO:0005186"}


id: PBO:0086036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function found in the cytoplasm and bud neck; mRNA expression may be regulated by the cell cycle and/or cell wall stress; overexpression of YBR071W affects endocytic protein trafficking","termid":"PBO:0086036"}


id: PBO:0077505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 222","termid":"PBO:0077505"}


id: MONDO:1040008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodevelopmental disorder caused by variation in the CAMK2D gene. This disorder is characterised by intellectual disability, speech and motor delay, behavioural problems and dilated cardiomyopathy. Patients often present brain structural anomalies and hypotonia, and less frequently, seizures.","definition_xrefs":["PMID:38272033","PMID:37372357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"CAMK2D-related neurodevelopmental disorder and dilated cardiomyopathy","termid":"MONDO:1040008","xrefs":{"Monarch":{"xref_id":"1040008"}}}


id: PR:P87173
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U6 snRNA-associated Sm-like protein LSm1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR15588:SF5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNA-associated Sm-like protein LSm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.08c","secondary_identifiers":["UniProtKB:P87173"],"synonyms":[{"name":"SPBC3D6.08c","type":"related"},{"name":"Spom972h-LSM1","type":"exact"}],"termid":"PR:P87173"}


id: PBO:0063458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor subunit A","termid":"PBO:0063458"}


id: PBO:0085174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Omega class glutathione transferase; putative cytosolic localization","termid":"PBO:0085174"}


id: MONDO:0015394
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nasal encephalocele is an extracranial herniation of intracranial contents (that maintain a connection to the subarachnoid space) into the fonticulus frontalis, presenting with nasal broadening and/or as a compressible, blue, pulsatile mass near the nasal bridge (that enlarges on crying or with jugular vein compression) or as an intranasal mass originating in the cribiform plate and that can cause nasal obstruction or respiratory distress. Hydrocephalus and increased intracranial pressure are also reported in some cases.","definition_xrefs":["Orphanet:141118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated encephalocele","termid":"MONDO:0016057"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"nasal encephalocele","secondary_identifiers":["UMLS:C0014066","MEDGEN:507680","GARD:19951","icd11.foundation:884932601","SCTID:65455002"],"termid":"MONDO:0015394","xrefs":{"Monarch":{"xref_id":"0015394"}}}


id: SO:0000071
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a gene when it is located within the intron of another gene and on the same strand.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inside_intron","termid":"SO:0000069"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inside_intron_parallel","synonyms":[{"name":"inside intron parallel","type":"exact"}],"termid":"SO:0000071"}


id: GO:0090222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates from the centrosome.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule nucleation by microtubule organizing center","termid":"GO:0051418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0044085","GO:0000226","GO:0065003"],"is_obsolete":false,"name":"centrosome-templated microtubule nucleation","termid":"GO:0090222"}


id: PBO:0051904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 11","termid":"PBO:0051904"}


id: GO:0051877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of dispersed pigment granules towards the center of the cell.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of pigment granule localization","termid":"GO:0051905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"pigment granule aggregation in cell center","termid":"GO:0051877"}


id: MONDO:0000142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete multiple congenital anomalies-hypotonia-seizures syndrome (obsolete MONDO:0000142)","termid":"MONDO:0000142","xrefs":{"Monarch":{"xref_id":"0000142"}}}


id: GO:0160005
data:
  {"annotated_genes":["SJAG_03930","SJAG_05414"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90727,107886],"is_not":false,"summary":null,"term":"GO:0160005"}]},"cv_name":"cellular_component","definition":"A transmembrane protein complex located in the endoplasmic reticulum (ER) involved in the correct folding of multipass membrane proteins in the ER membrane. In human, the substrate-binding Asterix (PAT10, WDR83OS) forms an obligate heterodimer with CCDC47.","definition_xrefs":["PMID:33960686","PMID:33082068","PMID:32814900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03930":null,"SJAG_05414":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005789","GO:0032991","GO:0005737","GO:0005783"],"is_obsolete":false,"name":"PAT complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0160005","terms_by_termid":{"GO:0160005":null}}


id: MONDO:0044211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urticaria","termid":"MONDO:0005492"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"idiopathic urticaria","secondary_identifiers":["ICD10CM:L50.1","ICD9:708.1","UMLS:C0157741","MEDGEN:510411","SCTID:42265009"],"synonyms":[{"name":"idiopathic angioedema-urticaria","type":"related"}],"termid":"MONDO:0044211","xrefs":{"Monarch":{"xref_id":"0044211"}}}


id: GO:0036060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a slit diaphragm, specialized cell-cell junction found between the interdigitating foot processes of the glomerular epithelium (the podocytes) in the vertebrate kidney, which is adapted for facilitating glomerular filtration.","definition_xrefs":["GOC:rph","PMID:20633639","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filtration diaphragm assembly","termid":"GO:0036058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"slit diaphragm assembly","termid":"GO:0036060"}


id: PBO:0062635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily J member 2 pseudogene","termid":"PBO:0062635"}


id: MONDO:0024770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome, familial, Behcet-like","termid":"MONDO:0031384"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoinflammatory syndrome, familial, X-linked, Behcet-like 2","secondary_identifiers":["OMIM:301074","MEDGEN:1808082","Orphanet:676125","UMLS:C5575495"],"synonyms":[{"name":"AIFBL2","type":"exact"},{"name":"autoinflammatory syndrome, familial, X-linked, Behcet-like 2","type":"exact"},{"name":"deficiency 1n ELF4, X-linked","type":"exact"}],"termid":"MONDO:0024770","xrefs":{"Monarch":{"xref_id":"0024770"}}}


id: MONDO:0006896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the esophagus that is caused by the reflux of gastric juice with contents of the stomach and duodenum.","definition_xrefs":["MESH:D004942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophagitis","termid":"MONDO:0001409"},{"relation_name":"is_a","term_name":"peptic ulcer disease","termid":"MONDO:0004247"},{"relation_name":"is_a","term_name":"esophageal ulcer","termid":"MONDO:0044782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"peptic esophagitis","secondary_identifiers":["DOID:13976","MEDGEN:5028","EFO:1001095","UMLS:C0014869","ICD9:530.11","SCTID:57643001"],"synonyms":[{"name":"peptic esophagitis","type":"exact"},{"name":"peptic reflux disease","type":"exact"},{"name":"reflux esophagitis","type":"exact"},{"name":"reflux oesophagitis","type":"exact"}],"termid":"MONDO:0006896","xrefs":{"Monarch":{"xref_id":"0006896"}}}


id: PBO:0071812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 7","termid":"PBO:0071812"}


id: GO:0003781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete actin bundling activity (obsolete GO:0003781)","synonyms":[{"name":"actin bundling activity","type":"exact"}],"termid":"GO:0003781"}


id: PBO:0058111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4326","termid":"PBO:0058111"}


id: MONDO:0100543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A precancerous condition characterized by the presence of somatic mutations in bone marrow or peripheral blood cells in individuals who may be cytopenic but do not have morphologic evidence of hematologic neoplasia. Its prevalence rises with age and is found in approximately 10% of individuals aged 70 to 80. It is associated with an increased risk of hematologic neoplasia. Mutations in the DNMT3A, TET2, or ASXL1 genes are usually identified. Approximately 10%-40% of individuals with age-related clonal hematopoiesis will progress to meet the diagnostic criteria for clonal hematopoiesis of indeterminate potential.","definition_xrefs":["NCIT:C158547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clonal hematopoiesis","termid":"MONDO:0100542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"clonal hematopoiesis of indeterminate potential","secondary_identifiers":["MEDGEN:1681237","UMLS:C4761612"],"termid":"MONDO:0100543","xrefs":{"Monarch":{"xref_id":"0100543"}}}


id: FYPO:0005549
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable when cells in a culture are deprived of nitrogen.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"normal viability upon nitrogen starvation","synonyms":[{"name":"normal cell population viability upon nitrogen starvation","type":"exact"},{"name":"normal viability in stationary phase upon nitrogen depletion","type":"related"},{"name":"normal viability upon nitrogen depletion","type":"exact"},{"name":"normal viability upon nitrogen deprivation","type":"exact"}],"termid":"FYPO:0005549"}


id: GO:0008374
data:
  {"annotated_genes":["SJAG_04792","SJAG_04337","SJAG_03609","SJAG_05413","SJAG_03162","SJAG_00068","SJAG_02654","SJAG_04305","SJAG_04041","SJAG_04059","SJAG_03305","SJAG_03935","SJAG_00395","SJAG_04049","SJAG_01957"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90734,93999,111556],"is_not":false,"summary":null,"term":"GO:0008374"},{"annotations":[89511,103480,90661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003841"},{"annotations":[103481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047184"},{"annotations":[103482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106262"},{"annotations":[113683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003846"},{"annotations":[110021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016411"},{"annotations":[113684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004144"},{"annotations":[88245,118378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034737"},{"annotations":[88403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032216"},{"annotations":[69453,104378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004366"},{"annotations":[104379,69451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016287"},{"annotations":[110582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004414"},{"annotations":[101391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160210"},{"annotations":[101392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009001"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an acyl group to an oxygen atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00068":null,"SJAG_00395":null,"SJAG_01957":null,"SJAG_02654":null,"SJAG_03162":null,"SJAG_03305":null,"SJAG_03609":null,"SJAG_03935":null,"SJAG_04041":null,"SJAG_04049":null,"SJAG_04059":null,"SJAG_04305":null,"SJAG_04337":null,"SJAG_04792":null,"SJAG_05413":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"O-acyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-162683","Reactome:R-HSA-422017","Reactome:R-HSA-5483229","Reactome:R-HSA-1482850","Reactome:R-HSA-3238694","Reactome:R-HSA-1482775","Reactome:R-HSA-1482781","Reactome:R-HSA-1482867","Reactome:R-HSA-1482861","Reactome:R-HSA-422104","Reactome:R-HSA-5358343"],"termid":"GO:0008374","terms_by_termid":{"GO:0003841":null,"GO:0003846":null,"GO:0004144":null,"GO:0004366":null,"GO:0004414":null,"GO:0008374":null,"GO:0009001":null,"GO:0016287":null,"GO:0016411":null,"GO:0032216":null,"GO:0034737":null,"GO:0047184":null,"GO:0106262":null,"GO:0160210":null}}


id: PBO:0075797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SS18 subunit of BAF chromatin remodeling complex","termid":"PBO:0075797"}


id: GO:0035815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the amount of sodium excreted in urine over a unit of time.","definition_xrefs":["GOC:yaf","GOC:mtg_25march11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of renal sodium excretion","termid":"GO:0035813"},{"relation_name":"is_a","term_name":"positive regulation of secretion","termid":"GO:0051047"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"renal sodium excretion","termid":"GO:0035812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of renal sodium excretion","synonyms":[{"name":"natriuresis","type":"broad"}],"termid":"GO:0035815"}


id: PBO:0084463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway; interacts with Ssk1p, leading to autophosphorylation and activation of Ssk2p which phosphorylates Pbs2p; also mediates actin cytoskeleton recovery from osmotic stress; a HOG-independent function of Ssk2p mediates the calcium-sensitive phenotype of the ptp2 msg5 double disruptant; SSK2 has a paralog, SSK22, that arose from the whole genome duplication","termid":"PBO:0084463"}


id: GO:0008531
data:
  {"annotated_genes":["SJAG_04845"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115229],"is_not":false,"summary":null,"term":"GO:0008531"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + riboflavin = ADP + FMN + 2 H+.","definition_xrefs":["RHEA:14357","EC:2.7.1.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"riboflavin kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RIBOFLAVINKIN-RXN","KEGG_REACTION:R00549","Reactome:R-HSA-196964"],"synonyms":[{"name":"ATP:riboflavin 5'-phosphotransferase activity","type":"related"},{"name":"FK","type":"related"},{"name":"flavokinase activity","type":"related"},{"name":"riboflavin kinase (phosphorylating)","type":"related"},{"name":"riboflavine kinase activity","type":"related"}],"termid":"GO:0008531","terms_by_termid":{"GO:0008531":null}}


id: PBO:0028241
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_at_mitotic_G1/S_phase_transition","termid":"PBO:0028241"}


id: GO:0010855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and decreases the activity of adenylate cyclase.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase inhibitor activity","termid":"GO:0010852"},{"relation_name":"is_a","term_name":"adenylate cyclase regulator activity","termid":"GO:0010854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0003674","GO:0030234","GO:0098772","GO:0004857","GO:0140678"],"is_obsolete":false,"name":"adenylate cyclase inhibitor activity","secondary_identifiers":["Reactome:R-HSA-400097"],"termid":"GO:0010855"}


id: PBO:0056708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of cell motility 1","termid":"PBO:0056708"}


id: MONDO:0022733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choreoacanthocytosis amyotrophic","termid":"MONDO:0022733","xrefs":{"Monarch":{"xref_id":"0022733"}}}


id: PBO:0044846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 131A","termid":"PBO:0044846"}


id: GO:0075084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of transmembrane receptor-mediated cAMP signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont transmembrane receptor-mediated cAMP signal transduction (obsolete GO:0075084)","synonyms":[{"name":"modulation by host of symbiont transmembrane receptor-mediated cAMP signaling","type":"exact"}],"termid":"GO:0075084"}


id: PBO:0110196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin-containing T-complex associated protein","termid":"PBO:0110196"}


id: GO:0090639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphatidylcholine biosynthetic process that involves a one-step direct condensation of choline with CDP-diacylglycerol to form phosphatidylcholine.","definition_xrefs":["MetaCyc:PWY-6826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine biosynthetic process","termid":"GO:0006656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylcholine biosynthesis from choline and CDP-diacylglycerol","termid":"GO:0090639"}


id: MONDO:0016895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete partial monosomy of the short arm of chromosome 17 (obsolete MONDO:0016895)","termid":"MONDO:0016895","xrefs":{"Monarch":{"xref_id":"0016895"}}}


id: PBO:0038612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate synthase homolog (inactive)","termid":"PBO:0038612"}


id: PATO:0002500
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed ventrolaterally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventrolaterally orientation","synonyms":[{"name":"ventrolaterally directed","type":"exact"}],"termid":"PATO:0002500"}


id: GO:0003743
data:
  {"annotated_genes":["SJAG_04981","SJAG_03732","SJAG_02995","SJAG_01659","SJAG_04900","SJAG_01117","SJAG_03147","SJAG_02376","SJAG_03629","SJAG_00466","SJAG_04744","SJAG_02471","SJAG_03678","SJAG_05003","SJAG_03223","SJAG_01643","SJAG_04891","SJAG_04772","SJAG_02307","SJAG_02628","SJAG_02390","SJAG_01954","SJAG_04635","SJAG_01576","SJAG_00507","SJAG_02164","SJAG_00662","SJAG_02856","SJAG_03996","SJAG_03433","SJAG_03472","SJAG_01487","SJAG_00786","SJAG_03788"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87004,89382,89420,89842,92254,94276,95358,96074,96154,96345,96726,97224,97285,97305,97884,98431,99602,100003,102135,102717,103560,104257,104817,104915,105083,105102,105111,106509,106803,110106,110192,110832,113473,115116],"is_not":false,"summary":null,"term":"GO:0003743"}]},"cv_name":"molecular_function","definition":"Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation factor activity, RNA binding","termid":"GO:0008135"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00466":null,"SJAG_00507":null,"SJAG_00662":null,"SJAG_00786":null,"SJAG_01117":null,"SJAG_01487":null,"SJAG_01576":null,"SJAG_01643":null,"SJAG_01659":null,"SJAG_01954":null,"SJAG_02164":null,"SJAG_02307":null,"SJAG_02376":null,"SJAG_02390":null,"SJAG_02471":null,"SJAG_02628":null,"SJAG_02856":null,"SJAG_02995":null,"SJAG_03147":null,"SJAG_03223":null,"SJAG_03433":null,"SJAG_03472":null,"SJAG_03629":null,"SJAG_03678":null,"SJAG_03732":null,"SJAG_03788":null,"SJAG_03996":null,"SJAG_04635":null,"SJAG_04744":null,"SJAG_04772":null,"SJAG_04891":null,"SJAG_04900":null,"SJAG_04981":null,"SJAG_05003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0045182"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0045182","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"translation initiation factor activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0003745","GO:0003744","Reactome:R-HSA-72722","Reactome:R-HSA-72621","Reactome:R-HSA-72697"],"termid":"GO:0003743","terms_by_termid":{"GO:0003743":null}}


id: PBO:0069108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 356, pseudogene","termid":"PBO:0069108"}


id: PBO:0045519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"denticleless E3 ubiquitin protein ligase homolog","termid":"PBO:0045519"}


id: PBO:0003670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER triose phosphate transmembrane transporter (predicted)","termid":"PBO:0003670"}


id: GO:0004317
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (3R)-hydroxypalmitoyl-[acyl-carrier protein] = 2-hexadecenoyl-[acyl-carrier protein] + H2O.","definition_xrefs":["PMID:8088535"],"gene_count":0,"genotype_count":0,"name":"obsolete (3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity (obsolete GO:0004317)","synonyms":[{"name":"(3R)-3-hydroxypalmitoyl-acyl-carrier-protein hydro-lyase (hexadec-2-enoyl-acyl-carrier protein-forming)","type":"exact"},{"name":"(3R)-3-hydroxypalmitoyl-acyl-carrier-protein hydro-lyase activity","type":"exact"},{"name":"(3R)-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity","type":"exact"},{"name":"3-hydroxypalmitoyl-ACP dehydratase activity","type":"exact"},{"name":"3-hydroxypalmitoyl-[acyl-carrier protein] dehydratase activity","type":"exact"},{"name":"3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity","type":"exact"},{"name":"3-hydroxypalmitoyl-acyl-carrier-protein dehydratase activity","type":"exact"}],"termid":"GO:0004317"}


id: PBO:0029156
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_telomere_length","termid":"PBO:0029156"}


id: PBO:0051089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy joining 1P (pseudogene)","termid":"PBO:0051089"}


id: PBO:0088394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P subunit Rpr2","termid":"PBO:0088394"}


id: GO:1902766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a skeletal muscle satellite cell from one site to another. Migration of these cells is a key step in the process of growth and repair of skeletal muscle cells.","definition_xrefs":["GO_REF:0000091","GOC:mr","GOC:TermGenie","PMID:17996437","PMID:19609936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle satellite cell migration","termid":"GO:1902766"}


id: MONDO:0010049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spastic paraplegia-glaucoma-intellectual disability syndrome is characterized by progressive spastic paraplegia, glaucoma and intellectual deficit. It has been described in two families. The second described sibship was born to consanguineous parents. The mode of inheritance is autosomal recessive.","definition_xrefs":["Orphanet:2818"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia-glaucoma-intellectual disability syndrome","secondary_identifiers":["UMLS:C1849113","MEDGEN:376520","GARD:4931","OMIM:270850","MESH:C564809"],"synonyms":[{"name":"spastic paresis glaucoma intellectual disability","type":"related"},{"name":"spastic paresis glaucoma mental retardation","type":"related"},{"name":"spastic paresis, glaucoma, and intellectual disability","type":"related"},{"name":"spastic paresis, glaucoma, and mental retardation","type":"related"}],"termid":"MONDO:0010049","xrefs":{"Monarch":{"xref_id":"0010049"}}}


id: PBO:0005339
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.4.10","termid":"PBO:0005339"}


id: GO:1902895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of microRNA (miRNA) gene transcription.","definition_xrefs":["GO_REF:0000058","GOC:kmv","GOC:TermGenie","PMID:24699545","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"},{"relation_name":"is_a","term_name":"regulation of miRNA transcription","termid":"GO:1902893"},{"relation_name":"is_a","term_name":"positive regulation of miRNA metabolic process","termid":"GO:2000630"},{"relation_name":"positively_regulates","term_name":"miRNA transcription","termid":"GO:0061614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0006355","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of miRNA transcription","synonyms":[{"name":"activation of pri-miRNA transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of microRNA gene transcription","type":"exact"},{"name":"positive regulation of pri-miRNA gene transcription","type":"exact"},{"name":"positive regulation of pri-miRNA transcription by RNA polymerase II","type":"exact"},{"name":"positive regulation of pri-miRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of primary miRNA gene transcription","type":"exact"},{"name":"up regulation of pri-miRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of pri-miRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of pri-miRNA transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1902895"}


id: PBO:0084917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Molecular chaperone; required for the assembly of alpha and beta subunits into the F1 sector of mitochondrial F1F0 ATP synthase; N-terminally propionylated in vivo","termid":"PBO:0084917"}


id: MOD:01015
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that inserts or replaces a residue with an isovaline.","definition_xrefs":["DeltaMass:110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unnatural residue","termid":"MOD:00850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isovaline residue (Iva)","synonyms":[{"name":"2-amino-2-methylbutanoic acid","type":"exact"},{"name":"Isovalyl (-I-,-Iva-)","type":"exact"},{"name":"Iva","type":"exact"}],"termid":"MOD:01015"}


id: PBO:0044199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin H","termid":"PBO:0044199"}


id: PATO:0000811
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000811 visual value (obsolete PATO:0000811)","termid":"PATO:0000811"}


id: PBO:0065364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate stem cell antigen","termid":"PBO:0065364"}


id: MONDO:0015789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-acquired combined pituitary hormone deficiencies without extra-pituitary malformations (obsolete MONDO:0015789)","secondary_identifiers":["ICD10CM:E23.0","Orphanet:178025"],"termid":"MONDO:0015789","xrefs":{"Monarch":{"xref_id":"0015789"}}}


id: MONDO:0000502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelial neoplasm morphologically characterized by the presence of a villous architectural pattern. Most often it occurs in the large intestine, small intestine, and the stomach in which the neoplastic epithelial cells show dysplastic features. It may also arise in the urinary bladder, urethra, and vagina.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"glandular cell neoplasm","termid":"MONDO:0024276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"villous adenoma","secondary_identifiers":["ICDO:8261/0","MEDGEN:60206","DOID:0050869","MESH:D018253","NCIT:C7399","UMLS:C0206674"],"synonyms":[{"name":"villous adenoma","type":"exact"}],"termid":"MONDO:0000502","xrefs":{"Monarch":{"xref_id":"0000502"}}}


id: MONDO:0007522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ehlers-Danlos syndrome, classic type (cEDS) is a form of Ehlers-Danlos syndrome that affects the connective tissue and is characterized by skin hyperextensibility, widened atrophic scars and joint hypermobility.","definition_xrefs":["Orphanet:287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Ehlers-Danlos syndrome, classic type","secondary_identifiers":["GARD:2088","NANDO:1200646","NANDO:2201256","SCTID:715318006","MEDGEN:909864","UMLS:C4225429"],"synonyms":[{"name":"EDS I","type":"related"},{"name":"EDS I, formerly","type":"related"},{"name":"EDS II","type":"related"},{"name":"EDS II, formerly","type":"related"},{"name":"EDS, classic type","type":"exact"},{"name":"Ehlers Danlos syndrome, mild classic type","type":"related"},{"name":"Ehlers Danlos syndrome, mild classic type, formerly","type":"related"},{"name":"Ehlers Danlos syndrome, mitis type","type":"related"},{"name":"Ehlers Danlos syndrome, mitis type, formerly","type":"related"},{"name":"Ehlers-Danlos syndrome classic type","type":"exact"},{"name":"Ehlers-Danlos syndrome classical type","type":"related"},{"name":"Ehlers-Danlos syndrome type 1 (formerly)","type":"related"},{"name":"Ehlers-Danlos syndrome type 2","type":"related"},{"name":"Ehlers-Danlos syndrome type 2 (formerly)","type":"related"},{"name":"Ehlers-Danlos syndrome, classic type","type":"exact"},{"name":"Ehlers-Danlos syndrome, gravis type","type":"related"},{"name":"Ehlers-Danlos syndrome, gravis type, formerly","type":"related"},{"name":"Ehlers-Danlos syndrome, severe classic type","type":"related"},{"name":"Ehlers-Danlos syndrome, severe classic type, formerly","type":"related"},{"name":"Ehlers-Danlos syndrome, type I","type":"related"},{"name":"Ehlers-Danlos syndrome, type I, formerly","type":"related"},{"name":"Ehlers-Danlos syndrome, type II","type":"related"},{"name":"Ehlers-Danlos syndrome, type II, formerly","type":"related"},{"name":"classic Ehlers-Danlos syndrome","type":"related"},{"name":"classical Ehlers-Danlos syndrome","type":"related"}],"termid":"MONDO:0007522","xrefs":{"Monarch":{"xref_id":"0007522"}}}


id: SO:0000959
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, single-stranded, linear DNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"linear","termid":"SO:0000987"},{"relation_name":"is_a","term_name":"single_stranded_DNA_chromosome","termid":"SO:0000956"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linear_single_stranded_DNA_chromosome","synonyms":[{"name":"linear single stranded DNA chromosome","type":"exact"}],"termid":"SO:0000959"}


id: MONDO:0012551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia, isolated","termid":"MONDO:0000005"},{"relation_name":"is_a","term_name":"alopecia totalis","termid":"MONDO:0019080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"alopecia areata 2","secondary_identifiers":["MEDGEN:343971","GARD:15496","MESH:C565186","OMIM:610753","UMLS:C1853104"],"synonyms":[{"name":"AA2","type":"exact"},{"name":"alopecia areata 2","type":"exact"}],"termid":"MONDO:0012551","xrefs":{"Monarch":{"xref_id":"0012551"}}}


id: GO:0045019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"regulation of nitric oxide biosynthetic process","termid":"GO:0045428"},{"relation_name":"is_a","term_name":"negative regulation of nitric oxide metabolic process","termid":"GO:1904406"},{"relation_name":"negatively_regulates","term_name":"nitric oxide biosynthetic process","termid":"GO:0006809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nitric oxide biosynthetic process","synonyms":[{"name":"down regulation of nitric oxide biosynthetic process","type":"exact"},{"name":"down-regulation of nitric oxide biosynthetic process","type":"exact"},{"name":"downregulation of nitric oxide biosynthetic process","type":"exact"},{"name":"inhibition of nitric oxide biosynthetic process","type":"narrow"},{"name":"negative regulation of nitric oxide anabolism","type":"exact"},{"name":"negative regulation of nitric oxide biosynthesis","type":"exact"},{"name":"negative regulation of nitric oxide formation","type":"exact"},{"name":"negative regulation of nitric oxide synthesis","type":"exact"}],"termid":"GO:0045019"}


id: MONDO:0001243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pathological process where the blood starts to coagulate throughout the whole body. This depletes the body of its platelets and coagulation factors, and there is an increased risk of hemorrhage.","definition_xrefs":["NCIT:C2992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thrombophilia","termid":"MONDO:0002305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"disseminated intravascular coagulation","secondary_identifiers":["MESH:D004211","SCTID:67406007","MEDGEN:41620","icd11.foundation:1622289887","UMLS:C0012739","NANDO:2200639","ICD9:286.6","DOID:11247"],"synonyms":[{"name":"DIC","type":"exact"},{"name":"DIC, disseminated intravascular coagulation","type":"exact"},{"name":"coagulation (DIC), disseminated intravascular","type":"exact"},{"name":"consumptive coagulopathy","type":"exact"},{"name":"defibrination syndrome","type":"exact"},{"name":"diffuse or disseminated intravascular coagulation","type":"exact"},{"name":"disseminated intravascular coagulation","type":"exact"},{"name":"disseminated intravascular coagulation (DIC)","type":"exact"},{"name":"intravascular coagulation (DIC), disseminated","type":"exact"}],"termid":"MONDO:0001243","xrefs":{"Monarch":{"xref_id":"0001243"}}}


id: GO:0046412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phenylmercury acetate, an organomercurial compound composed of a mercury atom attached to a benzene ring and an acetate group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organometal metabolic process","termid":"GO:0018942"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenylmercury acetate metabolic process","synonyms":[{"name":"phenylmercury acetate metabolism","type":"exact"}],"termid":"GO:0046412"}


id: PBO:0054526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1926","termid":"PBO:0054526"}


id: MONDO:1011452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intervertebral disc disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intervertebral disc disease, non-human animal","secondary_identifiers":["OMIA:000157"],"termid":"MONDO:1011452","xrefs":{"Monarch":{"xref_id":"1011452"}}}


id: MONDO:0007035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanotic cutaneous lesion that develops in the axilla and other body folds. It may be idiopathic, drug-induced, or it may be associated with the presence of an endocrine disorder or malignancy.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acanthosis nigricans","secondary_identifiers":["MESH:D000052","UMLS:C0000889","EFO:1000660","NCIT:C26687","ICD10CM:L83","Orphanet:924","Wikipedia:Acanthosis_nigricans","SCTID:402599005","DOID:3138","HP:0000956","icd11.foundation:71488193","MEDGEN:54"],"synonyms":[{"name":"acanthosis nigricans","type":"exact"},{"name":"acanthosis nigricans (disease)","type":"exact"},{"name":"an - acanthosis nigricans","type":"exact"},{"name":"keratosis nigricans","type":"exact"}],"termid":"MONDO:0007035","xrefs":{"Monarch":{"xref_id":"0007035"}}}


id: PBO:0053259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIF interleukin 6 family cytokine","termid":"PBO:0053259"}


id: MONDO:0019534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mixed autoimmune hemolytic anemia is a type of autoimmune hemolytic anemia (AIHA) defined by the presence of both warm and cold autoantibodies, which have a deleterious effect on red blood cells at either body temperature or at lower temperatures.","definition_xrefs":["Orphanet:90036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune hemolytic anemia","termid":"MONDO:0020108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280","MONDO:0005046"],"is_obsolete":false,"name":"mixed-type autoimmune hemolytic anemia","secondary_identifiers":["NANDO:1200309","GARD:19101","icd11.foundation:1878239449","MEDGEN:930926","UMLS:C4305257","SCTID:718716008"],"synonyms":[{"name":"mixed AIHA","type":"exact"}],"termid":"MONDO:0019534","xrefs":{"Monarch":{"xref_id":"0019534"}}}


id: MONDO:0017384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A widespread acute rash characterized by fever and multiple small pustules on a reddish background.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"severe cutaneous adverse reaction","termid":"MONDO:0005594"},{"relation_name":"is_a","term_name":"toxic dermatosis","termid":"MONDO:0017396"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acute generalized exanthematous pustulosis","secondary_identifiers":["MEDGEN:209091","Orphanet:293173","GARD:21164","UMLS:C0877055","ICD9:709.8","SCTID:702617007","NCIT:C112122","MESH:D056150","MedDRA:10048799"],"synonyms":[{"name":"AGEP","type":"exact"},{"name":"pustular drug eruption","type":"exact"},{"name":"toxic pustuloderma","type":"exact"}],"termid":"MONDO:0017384","xrefs":{"Monarch":{"xref_id":"0017384"}}}


id: PBO:0087070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L34B; homologous to mammalian ribosomal protein L34, no bacterial homolog; RPL34B has a paralog, RPL34A, that arose from the whole genome duplication","termid":"PBO:0087070"}


id: GO:0015047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H+ + 2 ferricytochrome c2 = NADP+ + 2 ferrocytochrome c2.","definition_xrefs":["EC:1.6.2.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor","termid":"GO:0016653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"NADPH-cytochrome-c2 reductase activity","secondary_identifiers":["MetaCyc:NADPH--CYTOCHROME-C2-REDUCTASE-RXN","RHEA:15237"],"synonyms":[{"name":"NADPH:ferricytochrome-c2 oxidoreductase activity","type":"related"},{"name":"cytochrome c2 reductase (reduced nicotinamide adinine dinucleotide phosphate, NADPH)","type":"related"},{"name":"reductase, cytochrome c2 (reduced nicotinamide adenine dinucleotide phosphate)","type":"related"}],"termid":"GO:0015047"}


id: GO:0061832
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Testis-specific junction between mature Sertoli cells involved in establishing the blood-testis barrier of the Sertoli cell.","definition_xrefs":["GOC:aruk","GOC:dph","GOC:bc","PMID:22332112","PMID:23546604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basal ectoplasmic specialization","synonyms":[{"name":"basal ES","type":"exact"}],"termid":"GO:0061832"}


id: FYPO:0002665
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide-serine-N-acetyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptide alpha-N-acetyltransferase activity","termid":"FYPO:0007839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abnormal peptide-serine-N-acetyltransferase activity","termid":"FYPO:0002665"}


id: PBO:0041828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CART prepropeptide","termid":"PBO:0041828"}


id: MONDO:0012154
data:
  {"annotated_genes":["SJAG_04553"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85532],"is_not":false,"summary":null,"term":"MONDO:0012154"}]},"cv_name":"mondo","definition":"Any myopia in which the cause of the disease is a mutation in the SCO2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04553":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C536105","OMIM:608908","UMLS:C1837148","MEDGEN:324696","GARD:9937"],"synonyms":[{"name":"MYP6","type":"related"},{"name":"SCO2 myopia (disease)","type":"exact"},{"name":"myopia (disease) caused by mutation in SCO2","type":"exact"},{"name":"myopia 6","type":"exact"},{"name":"myopia type 6","type":"exact"},{"name":"myopia, susceptibility to","type":"related"}],"termid":"MONDO:0012154","terms_by_termid":{"MONDO:0012154":null},"xrefs":{"Monarch":{"xref_id":"0012154"}}}


id: FYECO:0000433
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing mannitol as the carbon source, yeast extract and other components. The concentration of mannitol is typically around 2%.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannitol YE","synonyms":[{"name":"mannitol rich medium","type":"broad"}],"termid":"FYECO:0000433"}


id: GO:0002775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of an antimicrobial peptide during an immune response, resulting in an increase in intracellular or extracellular levels. Such peptides may have protective properties against bacteria, fungi, viruses, or protozoa.","definition_xrefs":["PMID:11807545","ISBN:0781735149","PMID:15638771","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator of immune response","termid":"GO:0002440"},{"relation_name":"part_of","term_name":"antimicrobial humoral immune response mediated by antimicrobial peptide","termid":"GO:0061844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"antimicrobial peptide production","termid":"GO:0002775"}


id: PBO:0111745
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C2H2 type","termid":"PBO:0111745"}


id: MONDO:1010745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermatomyositis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatomyositis, non-human animal","termid":"MONDO:1010127"},{"relation_name":"is_a","term_name":"polymyositis, dog","termid":"MONDO:1010931"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermatomyositis, dog","secondary_identifiers":["OMIA:000270-9615"],"termid":"MONDO:1010745","xrefs":{"Monarch":{"xref_id":"1010745"}}}


id: FYPO:0007576
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which vacuole fission, i.e. the division of one vacuole into two or more separate vacuoles, is abnormal.","definition_xrefs":["GO:0140572","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuole organization during vegetative growth","termid":"FYPO:0000812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal vacuole fission","synonyms":[{"name":"abnormal vacuole division","type":"exact"},{"name":"abnormal vacuole fission during mitotic cell cycle","type":"related"},{"name":"abnormal vacuole fission during vegetative growth","type":"exact"}],"termid":"FYPO:0007576"}


id: PBO:0063706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase 1","termid":"PBO:0063706"}


id: GO:0097335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a quetiapine stimulus.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to quetiapine","termid":"GO:0097335"}


id: MONDO:0800175
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, cardiac condition characterized by severely decreased cardiac output, hypoperfusion and end-organ dysfunction, in the presence of adequate intravascular volume. The clinical presentation is variable and may range from subtle hemodynamic alterations to overt cardiovascular collapse. Commonly reported features include dyspnea, crackles, elevated jugular venous pressure, altered mental state, abnormal pulse pressure, oliguria, cold extremities, and increased serum lactate levels.","definition_xrefs":["Orphanet:97292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiogenic shock","secondary_identifiers":["GARD:19362","ICD10CM:R57.0","icd11.foundation:1974956233","MedDRA:10007625","MEDGEN:48650","UMLS:C0036980"],"termid":"MONDO:0800175","xrefs":{"Monarch":{"xref_id":"0800175"}}}


id: MONDO:0006696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Loss or destruction of the epithelial lining of the uterine cervix.","definition_xrefs":["MESH:D002579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervix disorder","termid":"MONDO:0002256"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervix erosion","secondary_identifiers":["UMLS:C0269189","DOID:3456","MEDGEN:541802","MedDRA:10015128","SCTID:61253004"],"synonyms":[{"name":"erosion of cervix","type":"exact"}],"termid":"MONDO:0006696","xrefs":{"Monarch":{"xref_id":"0006696"}}}


id: PBO:0057499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 617","termid":"PBO:0057499"}


id: PBO:0001151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin-dependent protein kinase Cmk1","termid":"PBO:0001151"}


id: MOD:01088
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a 2,4,6-trimethyloxybenzyl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2,4,6-trimethyloxybenzyl modified residue","synonyms":[{"name":"Tmob","type":"exact"}],"termid":"MOD:01088"}


id: GO:0072599
data:
  {"annotated_genes":["SJAG_03737","SJAG_02588","SJAG_01558","SJAG_01759","SJAG_01282","SJAG_02456","SJAG_04129","SJAG_03396","SJAG_02867","SJAG_02330","SJAG_00064","SJAG_02208","SJAG_03315","SJAG_00603","SJAG_00959","SJAG_01782","SJAG_00175","SJAG_03411","SJAG_01496","SJAG_01750","SJAG_03955","SJAG_02354","SJAG_03684","SJAG_00360","SJAG_01840"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87398,109121,95222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006620"},{"annotations":[109897,90064,96829,105659,97543,108824,107795],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031204"},{"annotations":[87122,97866,103984,97915,112049,98095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045047"},{"annotations":[90310,115427,93765,116138,109122,109247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006614"},{"annotations":[114627,91113,113860],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006617"},{"annotations":[97545,107797,102084,108826,115428,105661],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006616"}]},"cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in the endoplasmic reticulum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to endoplasmic reticulum","termid":"GO:0070972"},{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00175":null,"SJAG_00360":null,"SJAG_00603":null,"SJAG_00959":null,"SJAG_01282":null,"SJAG_01496":null,"SJAG_01558":null,"SJAG_01750":null,"SJAG_01759":null,"SJAG_01782":null,"SJAG_01840":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02354":null,"SJAG_02456":null,"SJAG_02588":null,"SJAG_02867":null,"SJAG_03315":null,"SJAG_03396":null,"SJAG_03411":null,"SJAG_03684":null,"SJAG_03737":null,"SJAG_03955":null,"SJAG_04129":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of protein localization to endoplasmic reticulum","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment of protein localisation to ER","type":"exact"},{"name":"establishment of protein localisation to endoplasmic reticulum","type":"exact"},{"name":"establishment of protein localization in endoplasmic reticulum","type":"exact"},{"name":"establishment of protein localization to ER","type":"exact"}],"termid":"GO:0072599","terms_by_termid":{"GO:0006614":null,"GO:0006616":null,"GO:0006617":null,"GO:0006620":null,"GO:0031204":null,"GO:0045047":null}}


id: GO:0004680
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete casein kinase activity (obsolete GO:0004680)","synonyms":[{"name":"casein kinase activity","type":"exact"}],"termid":"GO:0004680"}


id: PBO:0040259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 12 pseudogene 2","termid":"PBO:0040259"}


id: PBO:0057947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3670-3","termid":"PBO:0057947"}


id: GO:0010439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.","definition_xrefs":["PMID:17420480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of carbohydrate biosynthetic process","termid":"GO:0043255"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"glucosinolate biosynthetic process","termid":"GO:0019761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"regulation of glucosinolate biosynthetic process","termid":"GO:0010439"}


id: MONDO:0020950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections of the eye caused by minute intracellular agents. These infections may lead to severe inflammation in various parts of the eye - conjunctiva, iris, eyelids, etc. Several viruses have been identified as the causative agents. Among these are Herpesvirus, Adenovirus, Poxvirus, and Myxovirus.","definition_xrefs":["MESH:D015828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"eye infectious disorder","termid":"MONDO:0043885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"viral eye infection","secondary_identifiers":["SCTID:312132001","UMLS:C0015407","MEDGEN:8753"],"synonyms":[{"name":"EYE INFECT VIRAL","type":"related"},{"name":"Eye Infection, Viral","type":"related"},{"name":"Eye Infections, Viral","type":"related"},{"name":"Infection, Viral Eye","type":"related"},{"name":"Infection, Viral Ocular","type":"related"},{"name":"Infections, Viral Eye","type":"related"},{"name":"Infections, Viral Ocular","type":"related"},{"name":"OCULAR INFECT VIRAL","type":"related"},{"name":"Ocular Infection, Viral","type":"related"},{"name":"Ocular Infections, Viral","type":"related"},{"name":"VIRAL EYE INFECT","type":"related"},{"name":"Viral Eye Infection","type":"related"},{"name":"Viral Eye Infections","type":"related"},{"name":"Viral Ocular Infection","type":"related"},{"name":"Viral Ocular Infections","type":"related"},{"name":"Viral eye infection","type":"related"},{"name":"viral eye infection","type":"exact"}],"termid":"MONDO:0020950","xrefs":{"Monarch":{"xref_id":"0020950"}}}


id: GO:0002062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"cartilage development","termid":"GO:0051216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chondrocyte differentiation","termid":"GO:0002062"}


id: PR:Q9USR2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U4/U6.U5 tri-snRNP-associated protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR24006:SF31","PRO:DNx","OMA:SCHPO02581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-splicing protein ubp10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC577.07","secondary_identifiers":["UniProtKB:Q9USR2"],"synonyms":[{"name":"Spom972h-USP39","type":"exact"},{"name":"inactive ubiquitin-specific-processing protease 10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USR2"}


id: MONDO:0010067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splenoportal vascular anomalies","secondary_identifiers":["MEDGEN:137945","OMIM:271500","MESH:C562761","SCTID:234131004","UMLS:C0340826"],"synonyms":[{"name":"splenoportal vascular anomalies","type":"exact"}],"termid":"MONDO:0010067","xrefs":{"Monarch":{"xref_id":"0010067"}}}


id: GO:0046537
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (2R)-2-phosphoglycerate = (2R)-3-phosphoglycerate; this reaction does not require the cofactor 2,3-bisphosphoglycerate.","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity (obsolete GO:0046537)","termid":"GO:0046537"}


id: PBO:0066899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 199","termid":"PBO:0066899"}


id: GO:1902808
data:
  {"annotated_genes":["SJAG_01210","SJAG_02723","SJAG_01401","SJAG_01825","SJAG_03591","SJAG_04140","SJAG_03048","SJAG_03699","SJAG_01311","SJAG_02404","SJAG_03681","SJAG_02810"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116567,105306,101876,108675,101121,105461,106145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900087"},{"annotations":[114837,115401,101123,91230,108381,110695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007089"}]},"cv_name":"biological_process","definition":"Any signaling pathway that activates or increases the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G1 phase to S phase of the cell cycle.","definition_xrefs":["GO_REF:0000058","GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle phase transition","termid":"GO:1901989"},{"relation_name":"is_a","term_name":"regulation of cell cycle G1/S phase transition","termid":"GO:1902806"},{"relation_name":"positively_regulates","term_name":"cell cycle G1/S phase transition","termid":"GO:0044843"}],"gene_count":12,"genes_by_uniquename":{"SJAG_01210":null,"SJAG_01311":null,"SJAG_01401":null,"SJAG_01825":null,"SJAG_02404":null,"SJAG_02723":null,"SJAG_02810":null,"SJAG_03048":null,"SJAG_03591":null,"SJAG_03681":null,"SJAG_03699":null,"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell cycle G1/S phase transition","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell cycle G1/S phase transition","type":"narrow"},{"name":"up regulation of cell cycle G1/S phase transition","type":"exact"},{"name":"up-regulation of cell cycle G1/S phase transition","type":"exact"},{"name":"upregulation of cell cycle G1/S phase transition","type":"exact"}],"termid":"GO:1902808","terms_by_termid":{"GO:0007089":null,"GO:1900087":null}}


id: PBO:0004122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Mis3","termid":"PBO:0004122"}


id: PBO:0078259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable B (pseudogene)","termid":"PBO:0078259"}


id: PBO:0091086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane insertase Oxa101","termid":"PBO:0091086"}


id: PBO:0050451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOATZ cilia and flagella associated protein","termid":"PBO:0050451"}


id: GO:0006368
data:
  {"annotated_genes":["SJAG_00320","SJAG_00925","SJAG_02319","SJAG_02393","SJAG_02314","SJAG_01713","SJAG_02691","SJAG_00119","SJAG_03118","SJAG_03967","SJAG_04038","SJAG_02873","SJAG_03128","SJAG_00914","SJAG_04933","SJAG_02097","SJAG_00483","SJAG_01149","SJAG_00150","SJAG_04353","SJAG_02551","SJAG_04257","SJAG_01610","SJAG_02238","SJAG_03211","SJAG_00293","SJAG_03006","SJAG_00139","SJAG_02209","SJAG_03481","SJAG_01707","SJAG_00913","SJAG_02698","SJAG_00540","SJAG_01151","SJAG_03061","SJAG_04670","SJAG_02416","SJAG_03944"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91460,92126,93430,94696,98652,99431,104997,105656,106312,107187,107379,110972,112679,113567,113889],"is_not":false,"summary":null,"term":"GO:0006368"},{"annotations":[101273],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001193"},{"annotations":[117433],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0034244"},{"annotations":[116491,105532,102557,108522,95292,104860,114793],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0032968"},{"annotations":[118343,108265,103064,113102,115708,90724,94096,94967,114041,116400,92872,110765,91864,108270,89546],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140673"}]},"cv_name":"biological_process","definition":"The extension of an RNA molecule after transcription initiation and promoter clearance at an RNA polymerase II promoter by the addition of ribonucleotides catalyzed by RNA polymerase II.","definition_xrefs":["GOC:txnOH","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription elongation","termid":"GO:0006354"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase II","termid":"GO:0006366"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00119":null,"SJAG_00139":null,"SJAG_00150":null,"SJAG_00293":null,"SJAG_00320":null,"SJAG_00483":null,"SJAG_00540":null,"SJAG_00913":null,"SJAG_00914":null,"SJAG_00925":null,"SJAG_01149":null,"SJAG_01151":null,"SJAG_01610":null,"SJAG_01707":null,"SJAG_01713":null,"SJAG_02097":null,"SJAG_02209":null,"SJAG_02238":null,"SJAG_02314":null,"SJAG_02319":null,"SJAG_02393":null,"SJAG_02416":null,"SJAG_02551":null,"SJAG_02691":null,"SJAG_02698":null,"SJAG_02873":null,"SJAG_03006":null,"SJAG_03061":null,"SJAG_03118":null,"SJAG_03128":null,"SJAG_03211":null,"SJAG_03481":null,"SJAG_03944":null,"SJAG_03967":null,"SJAG_04038":null,"SJAG_04257":null,"SJAG_04353":null,"SJAG_04670":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"transcription elongation by RNA polymerase II","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-73776","Reactome:R-HSA-167169","Reactome:R-HSA-75955"],"synonyms":[{"name":"RNA elongation from Pol II promoter","type":"exact"},{"name":"RNA polymerase II transcription elongation factor activity","type":"related"},{"name":"transcription elongation by RNA polymerase II promoter","type":"exact"},{"name":"transcription elongation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0006368","terms_by_termid":{"GO:0001193":null,"GO:0006368":null,"GO:0032968":null,"GO:0034244":null,"GO:0140673":null}}


id: GO:1904020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of G protein-coupled receptor internalization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24732013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor internalization","termid":"GO:0002090"},{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"regulates","term_name":"G protein-coupled receptor internalization","termid":"GO:0002031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"regulation of G protein-coupled receptor internalization","synonyms":[{"name":"regulation of G-protein-coupled receptor internalization","type":"exact"}],"termid":"GO:1904020"}


id: GO:1905757
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101874],"is_not":false,"summary":null,"term":"GO:1905757"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of primary cell septum biogenesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:27898700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mitotic division septum assembly","termid":"GO:0140280"},{"relation_name":"is_a","term_name":"regulation of primary cell septum biogenesis","termid":"GO:1905756"},{"relation_name":"negatively_regulates","term_name":"primary cell septum biogenesis","termid":"GO:0031671"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007049","GO:0000281","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of primary cell septum biogenesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905757","terms_by_termid":{"GO:1905757":null}}


id: PR:Q9P327
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of any of the following genes in Schizosaccharomyces pombe 972h-: SPAC977.09c/SPBC1348.10c.","definition_xrefs":["UniProtKB:Q9P327","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipase C977.09c/C1348.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1348.10c","synonyms":[{"name":"Spom972h-SPBC1348.10c","type":"exact"},{"name":"phospholipase B (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P327"}


id: MOD:01037
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes two hydrogen atoms of an L-tyrosine residue with two chlorine atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorinated tyrosine","termid":"MOD:00987"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dichlorinated tyrosine","synonyms":[{"name":"Cl2Tyr","type":"exact"}],"termid":"MOD:01037"}


id: MONDO:0035370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inflammatory bowel disease in which the cause of the disease is a mutation in the ALPI gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene","PMID:29567797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"ALPI-related inflammatory bowel disease","secondary_identifiers":["UMLS:C5681586","Orphanet:597887","MEDGEN:1842198","GARD:22400"],"termid":"MONDO:0035370","xrefs":{"Monarch":{"xref_id":"0035370"}}}


id: PBO:0050383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 7","termid":"PBO:0050383"}


id: PBO:0072677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rubicon autophagy regulator","termid":"PBO:0072677"}


id: FYPO:0002941
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is shaped in the form of a spheroid, and has a larger volume than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal. In spheroid cells, there is much less difference between the long and short axes of the cell than in wild type. Spheroid cells may shorter than normal, with approximately the same diameter as normal, or they may be enlarged.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen cell","termid":"FYPO:0000025"},{"relation_name":"is_a","term_name":"spheroid cell","termid":"FYPO:0001955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"swollen spheroid cell","synonyms":[{"name":"enlarged spheroid cell","type":"related"},{"name":"enlarged volume spheroid cell","type":"exact"},{"name":"large spheroid cell","type":"related"},{"name":"spheroid cell with increased cell size","type":"related"},{"name":"spheroid cell with increased cell volume","type":"exact"},{"name":"swollen rounded cell","type":"exact"}],"termid":"FYPO:0002941"}


id: GO:0030187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of melatonin (N-acetyl-5-methoxytryptamine).","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melatonin metabolic process","termid":"GO:0030186"},{"relation_name":"is_a","term_name":"indole-containing compound biosynthetic process","termid":"GO:0042435"},{"relation_name":"is_a","term_name":"hormone biosynthetic process","termid":"GO:0042446"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"melatonin biosynthetic process","synonyms":[{"name":"melatonin anabolism","type":"exact"},{"name":"melatonin biosynthesis","type":"exact"},{"name":"melatonin formation","type":"exact"},{"name":"melatonin synthesis","type":"exact"}],"termid":"GO:0030187"}


id: PBO:0053963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1271","termid":"PBO:0053963"}


id: MONDO:0010792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lethal infantile mitochondrial myopathy is a rare mitochondrial oxidative phosphorylation disorder characterized by progressive generalized hypotonia, progressive external ophthalmoplegia and severe lactic acidosis, which results in early fatality (days to months after birth). Patients may present with lethargy and areflexia and may associate additional features, such as cardiomyopathy, renal dysfunction, liver involvement and seizures.","definition_xrefs":["Orphanet:254857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"lethal infantile mitochondrial myopathy","secondary_identifiers":["UMLS:C1838876","OMIM:551000","MEDGEN:374077","SCTID:766251006","MESH:C564017","icd11.foundation:642272262","GARD:17226"],"synonyms":[{"name":"LIMD","type":"exact"},{"name":"LIMM","type":"exact"},{"name":"lethal infantile mitochondrial disease","type":"exact"},{"name":"mitochondrial myopathy, lethal, infantile","type":"related"}],"termid":"MONDO:0010792","xrefs":{"Monarch":{"xref_id":"0010792"}}}


id: SO:0000156
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cloning vector that is a hybrid of lambda phages and a plasmid that can be propagated as a plasmid or packaged as a phage,since they retain the lambda cos sites.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cosmid","secondary_identifiers":["http://en.wikipedia.org/wiki/Cosmid"],"synonyms":[{"name":"cosmid vector","type":"exact"}],"termid":"SO:0000156"}


id: GO:0032365
data:
  {"annotated_genes":["SJAG_01329","SJAG_03690","SJAG_00176","SJAG_01116","SJAG_00261","SJAG_01407","SJAG_04413","SJAG_01437","SJAG_00355"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109115,117012,106514,118177,101287,93729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035621"},{"annotations":[101162,105820,100975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032366"}]},"cv_name":"biological_process","definition":"The directed movement of lipids within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00176":null,"SJAG_00261":null,"SJAG_00355":null,"SJAG_01116":null,"SJAG_01329":null,"SJAG_01407":null,"SJAG_01437":null,"SJAG_03690":null,"SJAG_04413":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"intracellular lipid transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032365","terms_by_termid":{"GO:0032366":null,"GO:0035621":null}}


id: PBO:0028406
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_elongated_vegetative_cell_with_swollen_medial_region","termid":"PBO:0028406"}


id: PBO:0001647
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.1.130","termid":"PBO:0001647"}


id: MONDO:0023704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of blepharo-cheilo-dontic syndrome with with cleft lip and palate, complete absence of deciduous teeth, hypodontia of permanent teeth, hair alterations, hypertelorism, midface hypoplasia, abnormal EEG, syndactyly, and other findings. This is an n-of-1 use case where only one patient or family has been described with this disorder.","definition_xrefs":["PMID:3037904"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blepharocheilodontic syndrome","termid":"MONDO:0007339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328","MONDO:0000426"],"is_obsolete":false,"name":"Martinez Monasterio Pinheiro syndrome","secondary_identifiers":["MEDGEN:419330","GARD:3404","MESH:C536027","UMLS:C2931089"],"synonyms":[{"name":"cleft lip-palate-oligodontia-syndactyly-hair alterations","type":"related"},{"name":"cleft lip/palate oligodontia syndactyly hair alterations","type":"related"}],"termid":"MONDO:0023704","xrefs":{"Monarch":{"xref_id":"0023704"}}}


id: PBO:0073898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 13 member 4","termid":"PBO:0073898"}


id: PR:O42968
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1E8.03c gene.","definition_xrefs":["UniProtKB:O42968","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1E8.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1E8.03c","synonyms":[{"name":"Spom972h-SPBC1E8.03c","type":"exact"}],"termid":"PR:O42968"}


