# terms

id: GO:0003288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which a ventricular septum intermedium is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular septum morphogenesis","termid":"GO:0060412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular septum intermedium morphogenesis","termid":"GO:0003288"}


id: PBO:0068380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 181","termid":"PBO:0068380"}


id: MONDO:0008941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, syndromic intellectual disability characterized by early developmental delay with failure to thrive, intellectual disability, congenital hepatic fibrosis, renal cystic dysplasia, and dysmorphic facial features (bilateral ptosis, anteverted nostrils, high arched palate, and micrognathia). Variable additional features have been reported, including cerebellar anomalies, postaxial polydactyly, syndactyly, genital anomalies, tachypnea. There have been no further descriptions in the literature since 1987.","definition_xrefs":["Orphanet:2031"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete hereditary parenchymatous liver disease (obsolete MONDO:0015508)","termid":"MONDO:0015508"},{"relation_name":"excluded_subClassOf","term_name":"familial cystic renal disease","termid":"MONDO:0019741"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatic fibrosis-renal cysts-intellectual disability syndrome","secondary_identifiers":["OMIM:213010","MEDGEN:347120","MESH:C565867","UMLS:C1859300","GARD:5177"],"synonyms":[{"name":"Thompson Baraitser syndrome","type":"exact"},{"name":"Thompson-Baraitser syndrome","type":"exact"},{"name":"cerebellar vermis aplasia with associated features suggesting SMITH-Lemli-Opitz syndrome and Meckel syndrome","type":"related"}],"termid":"MONDO:0008941","xrefs":{"Monarch":{"xref_id":"0008941"}}}


id: MONDO:0029136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"},{"relation_name":"is_a","term_name":"LAMA2-related muscular dystrophy","termid":"MONDO:0100228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0006025"],"is_obsolete":false,"name":"muscular dystrophy, limb-girdle, autosomal recessive 23","secondary_identifiers":["UMLS:C4748327","MEDGEN:1648462","Orphanet:565837","GARD:22270","OMIM:618138"],"synonyms":[{"name":"LGMDR23","type":"related"},{"name":"laminin subunit alpha 2-related limb-girdle muscular dystrophy R23","type":"exact"},{"name":"muscular dystrophy, limb-girdle, autosomal recessive 23","type":"exact"}],"termid":"MONDO:0029136","xrefs":{"Monarch":{"xref_id":"0029136"}}}


id: PBO:0026641
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_mitotic_G2_phase","termid":"PBO:0026641"}


id: MONDO:0017725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Tay-Sachs disease","termid":"MONDO:0010100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066","MONDO:0005244","MONDO:0002039","MONDO:0005328","MONDO:0002525","MONDO:0005559"],"is_obsolete":false,"name":"Tay-Sachs disease, b variant, juvenile form","secondary_identifiers":["UMLS:C5679975","Orphanet:309185","SCTID:238022009","GARD:21325","MEDGEN:1842854"],"synonyms":[{"name":"GM2 gangliosidosis, B variant, juvenile form","type":"exact"},{"name":"hexosaminidase A deficiency, juvenile form","type":"exact"}],"termid":"MONDO:0017725","xrefs":{"Monarch":{"xref_id":"0017725"}}}


id: MONDO:0037149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"HSD10 mitochondrial disease","termid":"MONDO:0010327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"HSD10 disease, atypical type","secondary_identifiers":["GARD:16749","MEDGEN:1843277","Orphanet:85295","UMLS:C5680206"],"synonyms":[{"name":"HSD10 deficiency, atypical type","type":"exact"},{"name":"Syndromic X-linked intellectual disability type 10","type":"exact"},{"name":"X-linked intellectual disability-choreoathetosis-abnormal behavior syndrome","type":"broad"},{"name":"X-linked intellectual disability-choreoathetosis-abnormal behaviour syndrome","type":"broad"}],"termid":"MONDO:0037149","xrefs":{"Monarch":{"xref_id":"0037149"}}}


id: PBO:0065647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type A","termid":"PBO:0065647"}


id: GO:0099011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The secretion of molecules (e.g. neuropeptides, insulin-related peptides or neuromodulators such as serotonin and dopamine) contained within a neuronal dense core vesicle by fusion of the granule with the plasma membrane of a neuron in response to increased cytosolic calcium levels.","definition_xrefs":["PMID:24653208","PMID:17553987","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dense core granule exocytosis","termid":"GO:1990504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"neuronal dense core vesicle exocytosis","termid":"GO:0099011"}


id: PBO:0080487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor A domain containing 5B2","termid":"PBO:0080487"}


id: PBO:0081207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger with KRAB and SCAN domains 7 pseudogene 1","termid":"PBO:0081207"}


id: GO:0097700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any response to laminar fluid shear stress in a vascular endothelial cell.","definition_xrefs":["GOC:bc","GOC:BHF","PMID:21768538","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to laminar fluid shear stress","termid":"GO:0071499"},{"relation_name":"is_a","term_name":"vascular endothelial cell response to fluid shear stress","termid":"GO:0097699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular endothelial cell response to laminar fluid shear stress","secondary_identifiers":["Reactome:R-HSA-9856530"],"synonyms":[{"name":"blood vessel endothelial cell response to laminar fluid shear stress","type":"exact"}],"termid":"GO:0097700"}


id: SO:0001984
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene cassette array that corresponds to a silenced version of a mating type region.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_cassette_array","termid":"SO:0005854"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silent_mating_type_cassette_array","synonyms":[{"name":"silent mating-type cassette","type":"related"}],"termid":"SO:0001984"}


id: PBO:0058403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4773-2","termid":"PBO:0058403"}


id: GO:0046317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucosylceramide.","definition_xrefs":["GOC:ai","GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ceramide biosynthetic process","termid":"GO:2000303"},{"relation_name":"regulates","term_name":"glucosylceramide biosynthetic process","termid":"GO:0006679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044085"],"is_obsolete":false,"name":"regulation of glucosylceramide biosynthetic process","synonyms":[{"name":"regulation of glucosylceramide anabolism","type":"exact"},{"name":"regulation of glucosylceramide biosynthesis","type":"exact"},{"name":"regulation of glucosylceramide formation","type":"exact"},{"name":"regulation of glucosylceramide synthesis","type":"exact"}],"termid":"GO:0046317"}


id: PBO:0053197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LETM1 domain containing 1","termid":"PBO:0053197"}


id: MONDO:0016850
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atypical Norrie disease due to monosomy Xp11.3 is a rare chromosomal anomaly syndrome, resulting from the partial deletion of the short arm of chromosome X, principally characterized by classical Norrie disease (bilateral, severe retinal malformations and opacity of the lens leading to congenital blindness, on occasion associated with progressive sensorineural deafness and intellectual disability), microcephaly, hypotonia, psychomotor and growth delay, moderate to severe mental handicap and disruptive behavior. Clinical phenotype is highly variable and immunodeficiency, epilepsy and hypogonadism have also been reported.","definition_xrefs":["Orphanet:261501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial monosomy of the short arm of chromosome X","termid":"MONDO:0017004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical Norrie disease due to monosomy Xp11.3","secondary_identifiers":["ICD10CM:H35.5","UMLS:C4518083","SCTID:733626002","MEDGEN:1377538","GARD:20782"],"synonyms":[{"name":"atypical Norrie disease due to Xp11.3 microdeletion","type":"exact"},{"name":"atypical Norrie disease due to del(X)(p11.3)","type":"exact"}],"termid":"MONDO:0016850","xrefs":{"Monarch":{"xref_id":"0016850"}}}


id: GO:0015735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which uronic acid is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"uronic acid transmembrane transport","synonyms":[{"name":"uronic acid transport","type":"related"}],"termid":"GO:0015735"}


id: MONDO:0009268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gaucher disease - ophthalmoplegia - cardiovascular calcification is a variant of Gaucher disease, also known as a Gaucher-like disease that is characterized by cardiac involvement.","definition_xrefs":["Orphanet:2072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Gaucher disease","termid":"MONDO:0018150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0002561","MONDO:0005328"],"is_obsolete":false,"name":"Gaucher disease-ophthalmoplegia-cardiovascular calcification syndrome","secondary_identifiers":["MEDGEN:341563","SCTID:1156813002","OMIM:231005","DOID:0112250","MESH:C565553","UMLS:C1856476","GARD:12504"],"synonyms":[{"name":"Gaucher disease - ophthalmoplegia - cardiovascular calcification","type":"related"},{"name":"Gaucher disease type 3C","type":"exact"},{"name":"Gaucher disease, type 3C","type":"related"},{"name":"Gaucher disease, type IIIC","type":"related"},{"name":"Gaucher disease-ophthalmoplegia-cardiovascular calcification syndrome","type":"exact"},{"name":"Gaucher-like disease","type":"exact"},{"name":"cardiovascular Gaucher disease","type":"exact"},{"name":"pseudo Gaucher disease","type":"related"}],"termid":"MONDO:0009268","xrefs":{"Monarch":{"xref_id":"0009268"}}}


id: PR:P47943
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1006.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P47943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase eIF4A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.07","synonyms":[{"name":"Spom972h-SPAC1006.07","type":"exact"},{"name":"eIF-4A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eukaryotic initiation factor 4A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"translation initiation factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P47943"}


id: PR:Q10240
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug133 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 133 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.07","synonyms":[{"name":"Spom972h-mug133","type":"exact"}],"termid":"PR:Q10240"}


id: PBO:0054524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1924","termid":"PBO:0054524"}


id: GO:0090576
data:
  {"annotated_genes":["SJAG_03354","SJAG_03007","SJAG_02815","SJAG_05339","SJAG_03546","SJAG_03120","SJAG_01827","SJAG_00585","SJAG_00421"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95062,102567,115701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000126"},{"annotations":[99079,114862,106413,112138,108620,87661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000127"}]},"cv_name":"cellular_component","definition":"A transcription factor complex that acts at a regulatory region of a gene transcribed by RNA polymerase III.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator complex","termid":"GO:0005667"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00421":null,"SJAG_00585":null,"SJAG_01827":null,"SJAG_02815":null,"SJAG_03007":null,"SJAG_03120":null,"SJAG_03354":null,"SJAG_03546":null,"SJAG_05339":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RNA polymerase III transcription regulator complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA polymerase III transcription factor complex","type":"narrow"}],"termid":"GO:0090576","terms_by_termid":{"GO:0000126":null,"GO:0000127":null}}


id: PBO:0014616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lunapark homolog Lnp1","termid":"PBO:0014616"}


id: MONDO:0004631
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm affecting the tongue. The vast majority of cases are carcinomas.","definition_xrefs":["NCIT:C9345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory system cancer","termid":"MONDO:0000649"},{"relation_name":"is_a","term_name":"oral cavity cancer","termid":"MONDO:0005515"},{"relation_name":"is_a","term_name":"head and neck cancer","termid":"MONDO:0005627"},{"relation_name":"is_a","term_name":"tongue neoplasm","termid":"MONDO:0021240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"tongue cancer","secondary_identifiers":["ICD9:141.0","MEDGEN:102262","ICD9:141.4","MESH:D014062","ICD9:141.1","ICD9:141.5","UMLS:C0153349","ICD9:141.3","ICD9:141.6","ICD9:141.9","ICD9:141","SCTID:363360003","ICD9:141.2","DOID:8649"],"synonyms":[{"name":"cancer of tongue","type":"exact"},{"name":"malignant neoplasm of anterior 2/3 of tongue","type":"narrow"},{"name":"malignant neoplasm of anterior two-thirds of tongue","type":"narrow"},{"name":"malignant neoplasm of anterior two-thirds of tongue, part unspecified","type":"narrow"},{"name":"malignant neoplasm of base of tongue","type":"narrow"},{"name":"malignant neoplasm of border of tongue","type":"narrow"},{"name":"malignant neoplasm of dorsal surface of tongue","type":"narrow"},{"name":"malignant neoplasm of dorsal tongue","type":"narrow"},{"name":"malignant neoplasm of dorsal tongue NOS","type":"narrow"},{"name":"malignant neoplasm of dorsum of tongue","type":"narrow"},{"name":"malignant neoplasm of fixed part of tongue","type":"narrow"},{"name":"malignant neoplasm of fixed part of tongue NOS","type":"narrow"},{"name":"malignant neoplasm of junctional zone of tongue","type":"narrow"},{"name":"malignant neoplasm of lingual tonsil","type":"related"},{"name":"malignant neoplasm of mobile part of tongue","type":"narrow"},{"name":"malignant neoplasm of mobile part of tongue NOS","type":"narrow"},{"name":"malignant neoplasm of other sites of tongue","type":"narrow"},{"name":"malignant neoplasm of the tongue","type":"narrow"},{"name":"malignant neoplasm of tip and lateral border of tongue","type":"narrow"},{"name":"malignant neoplasm of tip and/or lateral border of tongue","type":"narrow"},{"name":"malignant neoplasm of tongue","type":"exact"},{"name":"malignant neoplasm of tongue NOS","type":"narrow"},{"name":"malignant neoplasm of tongue, NOS","type":"narrow"},{"name":"malignant neoplasm of tongue, tip and lateral border","type":"narrow"},{"name":"malignant neoplasm of ventral surface of tongue","type":"narrow"},{"name":"malignant neoplasm of ventral tongue surface","type":"narrow"},{"name":"malignant tongue neoplasm","type":"exact"},{"name":"malignant tongue tumor","type":"exact"},{"name":"malignant tongue tumour","type":"exact"},{"name":"malignant tumor of anterior two-thirds of tongue","type":"narrow"},{"name":"malignant tumor of base of tongue","type":"narrow"},{"name":"malignant tumor of lingual tonsil","type":"narrow"},{"name":"malignant tumor of lingual tonsil (disorder)","type":"related"},{"name":"malignant tumor of mobile part of tongue","type":"narrow"},{"name":"malignant tumor of posterior tongue","type":"narrow"},{"name":"malignant tumor of the tongue","type":"exact"},{"name":"malignant tumor of tongue","type":"exact"},{"name":"malignant tumour of anterior two-thirds of tongue","type":"narrow"},{"name":"malignant tumour of base of tongue","type":"narrow"},{"name":"malignant tumour of lingual tonsil","type":"narrow"},{"name":"malignant tumour of lingual tonsil (disorder)","type":"related"},{"name":"malignant tumour of mobile part of tongue","type":"narrow"},{"name":"malignant tumour of posterior tongue","type":"narrow"},{"name":"malignant tumour of the tongue","type":"exact"},{"name":"malignant tumour of tongue","type":"exact"},{"name":"tongue cancer","type":"exact"},{"name":"tongue carcinoma","type":"related"},{"name":"tongue neoplasm malignant","type":"exact"},{"name":"tongue neoplasm malignant stage unspecified","type":"narrow"},{"name":"tongue neoplasm, malignant","type":"exact"}],"termid":"MONDO:0004631","xrefs":{"Monarch":{"xref_id":"0004631"}}}


id: GO:0043771
data:
  {"annotated_genes":["SJAG_03708","SJAG_00533"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92452,114413],"is_not":false,"summary":null,"term":"GO:0043771"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + cytidine = ADP + CMP.","definition_xrefs":["RHEA:24674","PMID:211379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"nucleoside kinase activity","termid":"GO:0019206"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_03708":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"cytidine kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.7.1.213"],"synonyms":[{"name":"uridine-cytidine kinase activity","type":"narrow"}],"termid":"GO:0043771","terms_by_termid":{"GO:0043771":null}}


id: PBO:0070209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 137 pseudogene","termid":"PBO:0070209"}


id: PATO:0002469
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Structural quality inhereing in a bearer in which a joint has apposed bony surfaces united by fibrous tissue, permitting no movement; found only between bones.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sutured to","termid":"PATO:0002469"}


id: MONDO:0014985
data:
  {"annotated_genes":["SJAG_00611"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86486],"is_not":false,"summary":null,"term":"MONDO:0014985"}]},"cv_name":"mondo","definition":"Any Fanconi anemia in which the cause of the disease is a mutation in the MAD2L2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi anemia","termid":"MONDO:0019391"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0021190","MONDO:0002280","MONDO:0005046","MONDO:0005066"],"is_obsolete":false,"name":"Fanconi anemia complementation group V","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4310652","DOID:0111080","GARD:16213","OMIM:617243","MEDGEN:934619"],"synonyms":[{"name":"FANCV","type":"exact"},{"name":"Fanconi Anemia, complementation Group 5","type":"related"},{"name":"Fanconi Anemia, complementation group V","type":"exact"},{"name":"Fanconi Anemia, complementation group type V","type":"exact"},{"name":"Fanconi anaemia caused by mutation in MAD2L2","type":"exact"},{"name":"Fanconi anaemia complementation group type V","type":"exact"},{"name":"Fanconi anemia caused by mutation in MAD2L2","type":"exact"},{"name":"Fanconi anemia complementation group type V","type":"exact"},{"name":"Fanconi anemia, complementation GROUP V","type":"related"},{"name":"MAD2L2 Fanconi anaemia","type":"exact"},{"name":"MAD2L2 Fanconi anemia","type":"exact"}],"termid":"MONDO:0014985","terms_by_termid":{"MONDO:0014985":null},"xrefs":{"Monarch":{"xref_id":"0014985"}}}


id: MOD:01837
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links two L-cysteine residues with a thioether bond to form L-lanthionine.","definition_xrefs":["PubMed:6007887","PubMed:20805503","ChEBI:21347","RESID:AA0110#CYS2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lanthionine","termid":"MOD:01839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-lanthionine (Cys-Cys)","synonyms":[{"name":"(2R,2'R)-3,3'-sulfanediylbis(2-aminopropanoic acid)","type":"exact"},{"name":"(R)-S-(2-amino-2-carboxyethyl)-L-cysteine","type":"exact"},{"name":"(R,R)-2,6-diamino-4-thiaheptanedioic acid","type":"exact"},{"name":"(R,R)-3,3'-thiobis-(2-aminopropanoic acid)","type":"exact"},{"name":"(R,R)-bis(2-amino-2-carboxyethyl)sulfide","type":"exact"},{"name":"2-amino-3-(2-amino-2-carboxyethyl)sulfanylpropanoic acid","type":"exact"},{"name":"3,3'-thiobis-L-alanine","type":"exact"},{"name":"L-lanthionine","type":"exact"}],"termid":"MOD:01837"}


id: MONDO:0018876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mantle cell lymphoma is a rare form of malignant non-Hodgkin lymphoma affecting B lymphocytes in the lymph nodes in a region called the ``mantle zone''.","definition_xrefs":["Orphanet:52416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aggressive B-cell non-Hodgkin lymphoma","termid":"MONDO:0017595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"mantle cell lymphoma","secondary_identifiers":["ICDO:9673/3","MedDRA:10061275","NCIT:C4337","ONCOTREE:MCL","GARD:6969","MESH:D020522","SCTID:443487006","UMLS:C4721414","NORD:1399","EFO:1001469","DOID:0050746","ICD9:200.40","MEDGEN:1668377","icd11.foundation:1804127841"],"synonyms":[{"name":"LCM","type":"exact"},{"name":"MCL","type":"exact"},{"name":"classical mantle cell lymphoma","type":"exact"},{"name":"lymphoma, mantle cell","type":"related"},{"name":"mantle cell lymphoma","type":"exact"},{"name":"mantle zone lymphoma","type":"exact"}],"termid":"MONDO:0018876","xrefs":{"Monarch":{"xref_id":"0018876"}}}


id: PBO:0077223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane BAX inhibitor motif containing 7, pseudogene","termid":"PBO:0077223"}


id: MONDO:0003773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cystic meningioma that grows within the cerebral hemispheres.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral meningioma","termid":"MONDO:0003772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"intracerebral cystic meningioma","secondary_identifiers":["DOID:6113","UMLS:C1334236","MEDGEN:272767","NCIT:C5269"],"termid":"MONDO:0003773","xrefs":{"Monarch":{"xref_id":"0003773"}}}


id: PBO:0002922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ski complex interacting GTPase (predicted)","termid":"PBO:0002922"}


id: PBO:0075424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated antigen 11A","termid":"PBO:0075424"}


id: GO:0034973
data:
  {"annotated_genes":["SJAG_03936","SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93892,110013],"is_not":false,"summary":null,"term":"GO:0034973"}]},"cv_name":"cellular_component","definition":"A protein complex that contains a protein kinase (Sid2 in S. pombe) and its regulatory subunit (Mob1). The Sid2p-Mob1p kinase complex is a component of the septation initiation network in fission yeast (called the mitotic exit network in S. cerevisiae) and is required for cytokinesis. The analogous complex in S. cerevisiae is called Dbf2p-Mob1p complex.","definition_xrefs":["PMID:15060149","PMID:10837231","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03936":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Sid2-Mob1 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Dbf2p-Mob1p complex","type":"exact"},{"name":"Sid2-Mob1 kinase complex","type":"exact"},{"name":"Sid2p-Mob1p complex","type":"exact"}],"termid":"GO:0034973","terms_by_termid":{"GO:0034973":null}}


id: PBO:0027820
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_positive_regulation_of_DNA-directed_DNA_polymerase_activity","termid":"PBO:0027820"}


id: PBO:0049062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPR75-ASB3 readthrough","termid":"PBO:0049062"}


id: GO:1904154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of retrograde protein transport, ER to cytosol.","definition_xrefs":["GOC:PARL","GOC:TermGenie","PMID:18555783","GOC:bf","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein exit from endoplasmic reticulum","termid":"GO:0070863"},{"relation_name":"is_a","term_name":"regulation of retrograde protein transport, ER to cytosol","termid":"GO:1904152"},{"relation_name":"positively_regulates","term_name":"retrograde protein transport, ER to cytosol","termid":"GO:0030970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of retrograde protein transport, ER to cytosol","synonyms":[{"name":"activation of protein dislocation from ER","type":"narrow"},{"name":"activation of retrograde protein transport, ER to cytosol","type":"narrow"},{"name":"activation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"narrow"},{"name":"positive regulation of protein dislocation from ER","type":"exact"},{"name":"positive regulation of protein retrotranslocation from ER","type":"exact"},{"name":"positive regulation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"},{"name":"up regulation of protein dislocation from ER","type":"exact"},{"name":"up regulation of retrograde protein transport, ER to cytosol","type":"exact"},{"name":"up regulation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"},{"name":"up-regulation of protein dislocation from ER","type":"exact"},{"name":"up-regulation of protein retrotranslocation from ER","type":"exact"},{"name":"up-regulation of retrograde protein transport, ER to cytosol","type":"exact"},{"name":"up-regulation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"},{"name":"upregulation of protein dislocation from ER","type":"exact"},{"name":"upregulation of retrograde protein transport, ER to cytosol","type":"exact"},{"name":"upregulation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"}],"termid":"GO:1904154"}


id: MONDO:0010545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by the association in male patients of congenital cataracts with microcornea, dental anomalies and facial dysmorphism.","definition_xrefs":["Orphanet:627"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nance-Horan syndrome","secondary_identifiers":["icd11.foundation:938299000","ICD9:759.89","NORD:1489","MEDGEN:208665","MESH:C538336","OMIM:302350","GARD:7161","UMLS:C0796085","DOID:0060599","SCTID:445257004"],"synonyms":[{"name":"Mesiodens cataract syndrome","type":"related"},{"name":"Mesiodens-cataract syndrome","type":"related"},{"name":"NHS","type":"related"},{"name":"Nance-Horan syndrome","type":"exact"},{"name":"cataract X-linked with Hutchinsonian teeth","type":"related"},{"name":"cataract dental syndrome","type":"related"},{"name":"cataract, X-linked, with Hutchinsonian teeth","type":"related"},{"name":"cataract-dental syndrome","type":"related"},{"name":"nance-horan syndrome, X-linked dominant","type":"exact"}],"termid":"MONDO:0010545","xrefs":{"Monarch":{"xref_id":"0010545"}}}


id: GO:0016737
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which reduced flavodoxin acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["EC:1.19.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on reduced flavodoxin as donor","termid":"GO:0016737"}


id: GO:0018609
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,3-unsubstituted benzenoid + O2 + NAD(P)H + H+ = 2,3-cis-dihydroxydihydrobenzenoid + NAD(P)+. Substrates include 1,4-dichlorobenzene (forms 3,6-dichloro-cis-1,2-dihydroxycyclohexa-3,5-diene), 1,2,3,4-tetrachlorobenzene (forms cis-chlorobenzene dihydrodiol) and 1,2,4-trichlorobenzene (forms 3,4,6-trichloro-cis-1,2-dihydroxycyclohexa-3,5-diene).","definition_xrefs":["UM-BBD_enzymeID:e0062"],"gene_count":0,"genotype_count":0,"name":"obsolete chlorobenzene dioxygenase activity (obsolete GO:0018609)","termid":"GO:0018609"}


id: PBO:0065418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit beta 5","termid":"PBO:0065418"}


id: PBO:0061343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 1","termid":"PBO:0061343"}


id: GO:0021966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a neuron that is part of the corticospinal tract is directed from the cerebral cortex layer V to the spinal cord dorsal funiculus in response to a combination of attractive and repulsive cues.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","PMID:9878731","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"},{"relation_name":"part_of","term_name":"corticospinal tract morphogenesis","termid":"GO:0021957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corticospinal neuron axon guidance","synonyms":[{"name":"corticospinal neuron axon pathfinding","type":"exact"}],"termid":"GO:0021966"}


id: GO:0048754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of branches in an epithelial tube are generated and organized. A tube is a long hollow cylinder.","definition_xrefs":["GOC:dph","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"},{"relation_name":"is_a","term_name":"morphogenesis of a branching epithelium","termid":"GO:0061138"},{"relation_name":"part_of","term_name":"epithelial tube morphogenesis","termid":"GO:0060562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branching morphogenesis of an epithelial tube","synonyms":[{"name":"tubulogenesis","type":"related"}],"termid":"GO:0048754"}


id: GO:1904240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of VCP-NPL4-UFD1 AAA ATPase complex assembly.","definition_xrefs":["GOC:bf","GO_REF:0000058","GOC:PARL","PMID:17000876","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","termid":"GO:1904239"},{"relation_name":"negatively_regulates","term_name":"VCP-NPL4-UFD1 AAA ATPase complex assembly","termid":"GO:1904210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"negative regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","synonyms":[{"name":"down regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"down regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"down regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"exact"},{"name":"down regulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"down regulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"down regulation of p97-Ufd1-Npl4 complex formation","type":"exact"},{"name":"down-regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"down-regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"down-regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"exact"},{"name":"down-regulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"down-regulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"down-regulation of p97-Ufd1-Npl4 complex formation","type":"exact"},{"name":"downregulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"downregulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"downregulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"exact"},{"name":"downregulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"downregulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"downregulation of p97-Ufd1-Npl4 complex formation","type":"exact"},{"name":"inhibition of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"inhibition of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"inhibition of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"narrow"},{"name":"inhibition of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"narrow"},{"name":"inhibition of p97-Ufd1-Npl4 complex assembly","type":"narrow"},{"name":"inhibition of p97-Ufd1-Npl4 complex formation","type":"narrow"},{"name":"negative regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"negative regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"negative regulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"negative regulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"negative regulation of p97-Ufd1-Npl4 complex formation","type":"exact"}],"termid":"GO:1904240"}


id: PBO:0068638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 18, pseudogene","termid":"PBO:0068638"}


id: PATO:0002306
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A triangular quality inhering in a bearer by virtue of the bearer's having all sides of the same length.","definition_xrefs":["PATOC:JB"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triangular","termid":"PATO:0001875"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"equilateral triangular","termid":"PATO:0002306"}


id: GO:0003185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure of the sinoatrial valve is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve morphogenesis","termid":"GO:0003179"},{"relation_name":"part_of","term_name":"sinoatrial valve development","termid":"GO:0003172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sinoatrial valve morphogenesis","synonyms":[{"name":"SA valve morphogenesis","type":"exact"}],"termid":"GO:0003185"}


id: MONDO:0000036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hemolytic anemia, nonspherocytic (obsolete MONDO:0000036)","termid":"MONDO:0000036","xrefs":{"Monarch":{"xref_id":"0000036"}}}


id: PBO:0066998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA component of signal recognition particle 7SL2","termid":"PBO:0066998"}


id: GO:0061569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group into UDP, uridine diphosphate, to produce UTP.","definition_xrefs":["PMID:23416111","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP phosphorylation (obsolete GO:0061569)","termid":"GO:0061569"}


id: PBO:0083857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1F0 ATPase synthase peripheral stalk assembly factor; subunit of the matrix-exposed inner mitochondrial membrane localized INA complex (Ina22p-Ina17p) involved in assembly of the F1F0 peripheral stalk; co-purifies with Ina22p and ATP synthase subunits; null mutant displays elevated frequency of mitochondrial genome loss and has a respiratory growth defect","termid":"PBO:0083857"}


id: PBO:0045472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DRG1 pseudogene 1","termid":"PBO:0045472"}


id: GO:0060455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate frequency or extent of gastric secretion. Gastric secretion is the regulated release of gastric acid (hydrochloric acid) by parietal or oxyntic cells during digestion.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"regulation of gastric acid secretion","termid":"GO:0060453"},{"relation_name":"is_a","term_name":"negative regulation of digestive system process","termid":"GO:0060457"},{"relation_name":"negatively_regulates","term_name":"gastric acid secretion","termid":"GO:0001696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gastric acid secretion","termid":"GO:0060455"}


id: PBO:0108960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"source_file","termid":"PBO:0108960"}


id: MONDO:0043181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Refsum disease with increased pipecolic acidemia (obsolete MONDO:0043181)","termid":"MONDO:0043181","xrefs":{"Monarch":{"xref_id":"0043181"}}}


id: PBO:0068866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 106, pseudogene","termid":"PBO:0068866"}


id: SO:0001330
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N2_N2_2prime_O_trimethylguanosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N2_N2_2_prime_O_trimethylguanosine","secondary_identifiers":["RNAMOD:035"],"synonyms":[{"name":"N2,N2,2'-O-trimethylguanosine","type":"exact"},{"name":"m22Gmv","type":"exact"}],"termid":"SO:0001330"}


id: PBO:0005164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Sec8","termid":"PBO:0005164"}


id: PBO:0012292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FACT complex subunit Pob3","termid":"PBO:0012292"}


id: PBO:0059002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MMACHC pseudogene 1","termid":"PBO:0059002"}


id: FYPO:0007592
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitophagy, i.e. autophagic degradation of the mitochondria, is normal (i.e. indistinguishable from wild type) when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitophagy","termid":"FYPO:0007591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal mitophagy during nitrogen starvation","synonyms":[{"name":"normal autophagy of mitochondrion during nitrogen depletion","type":"exact"},{"name":"normal autophagy of mitochondrion during nitrogen deprivation","type":"exact"},{"name":"normal autophagy of mitochondrion during nitrogen starvation","type":"exact"}],"termid":"FYPO:0007592"}


id: GO:0016162
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose and cellotetraose, releasing cellobiose from the non-reducing ends of the chains.","definition_xrefs":["EC:3.2.1.91"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"cellulose 1,4-beta-cellobiosidase activity","secondary_identifiers":["MetaCyc:3.2.1.91-RXN"],"synonyms":[{"name":"1,4-beta-D-glucan cellobiohydrolase activity","type":"related"},{"name":"1,4-beta-cellobiohydrolase activity","type":"related"},{"name":"1,4-beta-glucan cellobiosidase activity","type":"related"},{"name":"C1 cellulase activity","type":"related"},{"name":"CBH 1","type":"related"},{"name":"avicelase activity","type":"broad"},{"name":"beta-1,4-glucan cellobiohydrolase activity","type":"related"},{"name":"beta-1,4-glucan cellobiosylhydrolase activity","type":"related"},{"name":"cellobiohydrolase I","type":"related"},{"name":"cellobiohydrolase activity","type":"related"},{"name":"cellobiosidase activity","type":"related"},{"name":"exo-1,4-beta-D-glucanase activity","type":"related"},{"name":"exo-beta-1,4-glucan cellobiohydrolase activity","type":"related"},{"name":"exo-cellobiohydrolase activity","type":"related"},{"name":"exocellobiohydrolase activity","type":"related"},{"name":"exoglucanase activity","type":"related"}],"termid":"GO:0016162"}


id: PBO:0038353
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-stem_parasite_of","termid":"PBO:0038353"}


id: PBO:0008884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type M-specific polypeptide Mi","termid":"PBO:0008884"}


id: MONDO:0010026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"SHORT syndrome is a rare inherited condition of multiple anomalies whose name stands for short stature, hyperextensibility of joints, ocular depression, Rieger anomaly and teething delay which, along with mild intrauterine growth restriction, partial lipodystrophy, delayed bone age, hernias and progeroid appearance, are manifestations of the disease.","definition_xrefs":["Orphanet:3163"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"excluded_subClassOf","term_name":"progeroid syndrome","termid":"MONDO:0015333"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"hereditary lipodystrophy","termid":"MONDO:0020087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"SHORT syndrome","secondary_identifiers":["NORD:1710","OMIM:269880","icd11.foundation:1264512044","UMLS:C0878684","DOID:0111454","MESH:C537327","GARD:7633","MEDGEN:164212"],"synonyms":[{"name":"Aarskog-Ose-Pande syndrome","type":"exact"},{"name":"Rieger anomaly-partial lipodystrophy syndrome","type":"exact"},{"name":"SHORT syndrome","type":"exact"},{"name":"lipodystrophy, partial, with Rieger anomaly and short stature","type":"related"},{"name":"lipodystrophy-Rieger anomaly-diabetes syndrome","type":"exact"},{"name":"partial lipodystrophy with Rieger anomaly and short stature","type":"related"},{"name":"short stature, hyperextensibility, hernia, ocular depression, Rieger anomaly and teething delay","type":"related"},{"name":"short stature, hyperextensibility, hernia, ocular depression, Rieger anomaly, and teething delay","type":"related"},{"name":"short syndrome","type":"exact"}],"termid":"MONDO:0010026","xrefs":{"Monarch":{"xref_id":"0010026"}}}


id: PBO:0042011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 68","termid":"PBO:0042011"}


id: PBO:0064981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME N-terminal like, pseudogene","termid":"PBO:0064981"}


id: MOD:00195
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-alanine residue and a glycine residue to form L-alanine 5-imidazolinone glycine.","definition_xrefs":["RESID:AA0187","PubMed:10220322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-imidazolinone ring crosslinked residues (Gly)","termid":"MOD:01882"},{"relation_name":"is_a","term_name":"crosslinked L-alanine residue","termid":"MOD:02040"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-alanine 5-imidazolinone glycine","synonyms":[{"name":"(2-[(1S)-1-aminoethyl]-5-oxo-4,5-dihydro-1H-imidazol-1-yl)acetic acid","type":"exact"},{"name":"2-[1-aminoethyl]-1-carboxymethyl-1-imidazolin-5-one","type":"exact"},{"name":"4-methylidene-imidazole-5-one active site","type":"exact"},{"name":"CROSSLNK 5-imidazolinone (Ala-Gly)","type":"exact"},{"name":"L-alanine 5-imidazolinone glycine","type":"exact"},{"name":"XLNK-1Ala-NGly(Imidazole)","type":"exact"},{"name":"alanyl-5-imidazolinone glycine","type":"exact"},{"name":"para-hydroxybenzylidene-imidazolidinone chromophore","type":"exact"}],"termid":"MOD:00195"}


id: PBO:0027382
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_exit_from_mitosis","termid":"PBO:0027382"}


id: MONDO:0010512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked, syndromic, Bain type","secondary_identifiers":["Orphanet:662198","OMIM:300986","GARD:13442","DOID:0070538","UMLS:C4310814","MEDGEN:934781"],"synonyms":[{"name":"MRXSB","type":"exact"},{"name":"intellectual developmental disorder, X-linked, syndromic, Bain type, X-linked dominant","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, Bain type","type":"exact"},{"name":"mental retardation, X-linked, syndromic, Bain type","type":"exact"}],"termid":"MONDO:0010512","xrefs":{"Monarch":{"xref_id":"0010512"}}}


id: PATO:0000859
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000859 pinna reflex value (obsolete PATO:0000859)","termid":"PATO:0000859"}


id: PBO:0055407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2837","termid":"PBO:0055407"}


id: GO:0050384
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-(beta-D-ribofuranosyl)uric acid + phosphate = alpha-D-ribose 1-phosphate + H+ + urate.","definition_xrefs":["RHEA:13909","EC:2.4.2.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"urate-ribonucleotide phosphorylase activity","secondary_identifiers":["KEGG_REACTION:R02646","MetaCyc:URATE-RIBONUCLEOTIDE-PHOSPHORYLASE-RXN"],"synonyms":[{"name":"UAR phosphorylase activity","type":"related"},{"name":"urate-ribonucleotide:phosphate D-ribosyltransferase activity","type":"related"},{"name":"urate-ribonucleotide:phosphate alpha-D-ribosyltransferase activity","type":"related"}],"termid":"GO:0050384"}


id: PBO:0046897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM20C golgi associated secretory pathway kinase","termid":"PBO:0046897"}


id: PBO:0041940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBX3 pseudogene 8","termid":"PBO:0041940"}


id: PBO:0046838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5 pseudogene 11","termid":"PBO:0046838"}


id: PATO:0001482
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's standing out or projecting beyond a surface or line.","definition_xrefs":["Dictionary.com:Dictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protruding","termid":"PATO:0001598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prominent","termid":"PATO:0001482"}


id: GO:0097376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of an interneuron is directed to a specific target site in response to a combination of attractive and repulsive cues. An interneuron is any neuron which is not motor or sensory. Interneurons may also refer to neurons whose axons remain within a particular brain region, as contrasted with projection neurons which have axons projecting to other brain regions.","definition_xrefs":["CL:0000099","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"interneuron axon guidance","termid":"GO:0097376"}


id: GO:1901103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of gramicidin S.","definition_xrefs":["PMID:7534306","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gramicidin S biosynthetic process","synonyms":[{"name":"gramicidin S anabolism","type":"exact"},{"name":"gramicidin S biosynthesis","type":"exact"},{"name":"gramicidin S formation","type":"exact"},{"name":"gramicidin S synthesis","type":"exact"}],"termid":"GO:1901103"}


id: PBO:0051082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy constant epsilon P2 (pseudogene)","termid":"PBO:0051082"}


id: MONDO:0004897
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vertical strabismus in which there is permanent downward deviation of the visual axis of one eye.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"strabismus","termid":"MONDO:0003432"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotropia","secondary_identifiers":["SCTID:29491004","UMLS:C0152208","ICD9:378.32","NCIT:C42086","DOID:9841","icd11.foundation:1840811827","MEDGEN:101826"],"synonyms":[{"name":"downward ocular deviation","type":"exact"},{"name":"hypotropia","type":"exact"},{"name":"sunset sign","type":"exact"}],"termid":"MONDO:0004897","xrefs":{"Monarch":{"xref_id":"0004897"}}}


id: PBO:0050830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydatidiform mole associated and imprinted","termid":"PBO:0050830"}


id: GO:0006695
data:
  {"annotated_genes":["SJAG_04018"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109346],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0045540"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholesterol metabolic process","termid":"GO:0008203"},{"relation_name":"is_a","term_name":"sterol biosynthetic process","termid":"GO:0016126"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"cholesterol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-191273"],"synonyms":[{"name":"cholesterol anabolism","type":"exact"},{"name":"cholesterol biosynthesis","type":"exact"},{"name":"cholesterol formation","type":"exact"},{"name":"cholesterol synthesis","type":"exact"}],"termid":"GO:0006695","terms_by_termid":{"GO:0045540":null}}


id: GO:0061522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction 1,4-dihydroxy-2-naphthoyl-CoA + H2O = 1,4-dihydroxy-2-naphthoate + CoA + H+.","definition_xrefs":["RHEA:26309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA hydrolase activity","termid":"GO:0016289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"1,4-dihydroxy-2-naphthoyl-CoA thioesterase activity","secondary_identifiers":["EC:3.1.2.28"],"termid":"GO:0061522"}


id: PBO:0042393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD300 molecule like family member g","termid":"PBO:0042393"}


id: FYPO:0004106
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, has no septum, and contains more than one nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"is_a","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"is_a","term_name":"inviable aseptate vegetative cell","termid":"FYPO:0003931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000004","FYPO:0005447","FYPO:0000032","FYPO:0000631","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"inviable multinucleate aseptate vegetative cell","synonyms":[{"name":"inviable multinucleate aseptate cell during vegetative growth","type":"exact"},{"name":"inviable multinucleate aseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; multinucleate aseptate vegetative cell","type":"exact"},{"name":"multinucleate aseptate inviable vegetative cell","type":"exact"}],"termid":"FYPO:0004106"}


id: GO:0043892
data:
  {"annotated_genes":["SJAG_02960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104539],"is_not":false,"summary":null,"term":"GO:0043892"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: lactaldehyde + NADP+ = methylglyoxal + NADPH + H+.","definition_xrefs":["EC:1.1.1.283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"methylglyoxal reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:21748","MetaCyc:1.1.1.283-RXN"],"synonyms":[{"name":"Gre2","type":"related"},{"name":"lactaldehyde dehydrogenase (NADP+)","type":"exact"},{"name":"lactaldehyde:NADP+ oxidoreductase activity","type":"related"},{"name":"methylglyoxal reductase (NADPH-dependent) activity","type":"exact"}],"termid":"GO:0043892","terms_by_termid":{"GO:0043892":null}}


id: PBO:0027660
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_mitochondrion","termid":"PBO:0027660"}


id: FYPO:0002475
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the region of a chromosome at which a DNA double-strand break has occurred is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to double-strand break site","termid":"FYPO:0002473"},{"relation_name":"is_a","term_name":"increased protein localization to chromosome during vegetative growth","termid":"FYPO:0002840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased protein localization to double-strand break site","synonyms":[{"name":"increased protein localisation to double-strand break site","type":"exact"},{"name":"increased protein localization to DSB site","type":"exact"},{"name":"increased protein localization to double-strand break site during mitotic cell cycle","type":"related"},{"name":"increased protein localization to double-strand break site during vegetative growth","type":"exact"},{"name":"increased protein localization to site of double-strand break","type":"exact"}],"termid":"FYPO:0002475"}


id: GO:0002431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a the binding of the Fc portion of an immunoglobulin by an Fc receptor capable of activating or perpetuating an immune response. The Fc portion of an immunoglobulin is its C-terminal constant region.","definition_xrefs":["ISBN:0781735149","GO_REF:0000022","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-activating cell surface receptor signaling pathway","termid":"GO:0002429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Fc receptor mediated stimulatory signaling pathway","synonyms":[{"name":"Fc receptor mediated stimulatory signalling pathway","type":"exact"},{"name":"Fc-receptor mediated stimulatory signaling pathway","type":"exact"}],"termid":"GO:0002431"}


id: PBO:0079631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q2 pseudogene 1","termid":"PBO:0079631"}


id: MONDO:0004282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete eccrine porocarcinoma (obsolete MONDO:0004282)","termid":"MONDO:0004282","xrefs":{"Monarch":{"xref_id":"0004282"}}}


id: PBO:0049771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 4 pseudogene 9","termid":"PBO:0049771"}


id: PBO:0060593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCAM1 antisense RNA1","termid":"PBO:0060593"}


id: PBO:0074606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 11G","termid":"PBO:0074606"}


id: GO:0009116
data:
  {"annotated_genes":["SJAG_02580","SJAG_00694","SJAG_03771","SJAG_00044","SJAG_00957","SJAG_05029","SJAG_02582","SJAG_03096","SJAG_01781","SJAG_00885","SJAG_00134","SJAG_03881","SJAG_03213","SJAG_02959","SJAG_02179","SJAG_06634","SJAG_01859","SJAG_04927","SJAG_04264","SJAG_01070","SJAG_04693","SJAG_01359","SJAG_01673"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046086"},{"annotations":[87061,87062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"},{"annotations":[113199,113198,90026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046085"},{"annotations":[116334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[107865,88671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"},{"annotations":[107990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[107991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"},{"annotations":[112584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046495"},{"annotations":[107992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071592"},{"annotations":[98086,98087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043174"},{"annotations":[111664,90134,90556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006152"},{"annotations":[106751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042278"},{"annotations":[93019,115336,93239,89252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"},{"annotations":[90135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046135"},{"annotations":[104989,106753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006213"},{"annotations":[113309,97228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043097"},{"annotations":[111405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046132"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine).","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing small molecule metabolic process","termid":"GO:0055086"},{"relation_name":"is_a","term_name":"glycosyl compound metabolic process","termid":"GO:1901657"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00134":null,"SJAG_00694":null,"SJAG_00885":null,"SJAG_00957":null,"SJAG_01070":null,"SJAG_01359":null,"SJAG_01673":null,"SJAG_01781":null,"SJAG_01859":null,"SJAG_02179":null,"SJAG_02580":null,"SJAG_02582":null,"SJAG_02959":null,"SJAG_03096":null,"SJAG_03213":null,"SJAG_03771":null,"SJAG_03881":null,"SJAG_04264":null,"SJAG_04693":null,"SJAG_04927":null,"SJAG_05029":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"nucleoside metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleoside metabolism","type":"exact"}],"termid":"GO:0009116","terms_by_termid":{"GO:0006152":null,"GO:0006154":null,"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0006213":null,"GO:0009972":null,"GO:0042278":null,"GO:0043097":null,"GO:0043174":null,"GO:0046085":null,"GO:0046086":null,"GO:0046132":null,"GO:0046135":null,"GO:0046495":null,"GO:0071590":null,"GO:0071592":null}}


id: MONDO:0021184
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections caused by the HTLV or BLV deltaretroviruses. They include human T-cell leukemia-lymphoma (LEUKEMIA-LYMPHOMA, T-CELL, ACUTE, HTLV-I-ASSOCIATED).","definition_xrefs":["MESH:D006800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deltaretrovirus infections","secondary_identifiers":["MEDGEN:9320","EFO:1001303","UMLS:C0020091"],"synonyms":[{"name":"BLV infection","type":"related"},{"name":"BLV infections","type":"related"},{"name":"Deltaretrovirus infection","type":"related"},{"name":"HTLV BLV infections","type":"related"},{"name":"HTLV infection","type":"related"},{"name":"HTLV infections","type":"related"},{"name":"HTLV-BLV infection","type":"related"},{"name":"HTLV-BLV infections","type":"related"},{"name":"infection, Deltaretrovirus","type":"related"},{"name":"infections, Deltaretrovirus","type":"related"}],"termid":"MONDO:0021184","xrefs":{"Monarch":{"xref_id":"0021184"}}}


id: PBO:0074718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 78","termid":"PBO:0074718"}


id: PBO:0046349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 7","termid":"PBO:0046349"}


id: GO:0036408
data:
  {"annotated_genes":["SJAG_02773","SJAG_02165"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90239,90898],"is_not":false,"summary":null,"term":"GO:0036408"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 14) = CoA + histone H3 N6-acetyl-L-lysine (position 14).","definition_xrefs":["GOC:vw","PMID:19056256","PMID:18552846","PMID:21289066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 acetyltransferase activity","termid":"GO:0010484"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02165":null,"SJAG_02773":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740","GO:0140096","GO:0034212"],"is_obsolete":false,"name":"histone H3K14 acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H3-K14 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K14 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K14 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K14 specific)","type":"exact"}],"termid":"GO:0036408","terms_by_termid":{"GO:0036408":null}}


id: PBO:0062117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 16","termid":"PBO:0062117"}


id: MONDO:0007084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia, isolated","termid":"MONDO:0000005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"familial focal alopecia","secondary_identifiers":["MEDGEN:350835","UMLS:C1863092","MESH:C566301","OMIM:104110"],"synonyms":[{"name":"ALPF","type":"related"},{"name":"alopecia, familial focal","type":"exact"}],"termid":"MONDO:0007084","xrefs":{"Monarch":{"xref_id":"0007084"}}}


id: GO:0019824
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subform of peroxisome that corresponds to an intermediate in a peroxisome assembly pathway, which operates by conversion of peroxisomal subforms in the direction P1, P2 -> P3 -> P4 -> P5 -> P6. P6 peroxisomes are distinguished from the other subforms on the bases of buoyant density and protein content, and are equivalent to mature peroxisomes.","definition_xrefs":["PMID:10629216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005777"}],"interesting_parent_ids":["GO:0005575","GO:0005777","GO:0005737"],"is_obsolete":false,"name":"P6 peroxisome","synonyms":[{"name":"peroxisome vesicle","type":"broad"}],"termid":"GO:0019824"}


id: PBO:0086973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of protein phosphatase 1 (Glc7p); involved in glycogen metabolism and chromosome segregation; proposed to regulate Glc7p activity via conformational alteration; ortholog of the mammalian protein phosphatase inhibitor 2; protein abundance increases in response to DNA replication stress","termid":"PBO:0086973"}


id: PBO:0008725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA arginine","termid":"PBO:0008725"}


id: GO:0070471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the uterus. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The uterus is a muscular organ of the female mammal for containing and usually for nourishing the young during development prior to birth.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle contraction","termid":"GO:0006939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uterine smooth muscle contraction","synonyms":[{"name":"myometrial contraction","type":"exact"},{"name":"myometrial smooth muscle contraction","type":"exact"},{"name":"myometrium contraction","type":"exact"}],"termid":"GO:0070471"}


id: GO:0043733
data:
  {"annotated_genes":["SJAG_05257","SJAG_01971"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74067,101080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008725"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: DNA containing 3-methylbase + H2O = DNA with abasic site + 3-methylbase. This reaction is the hydrolysis of DNA by cleavage of the N-C1' glycosidic bond between the damaged DNA 3-methylpurine or 3-methylpyrimidine base and the deoxyribose sugar to remove the methylated base, leaving an apurinic or apyrimidinic site.","definition_xrefs":["PMID:10777493","PMID:14517230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkylbase DNA N-glycosylase activity","termid":"GO:0003905"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01971":null,"SJAG_05257":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0016787","GO:0140097","GO:0003824"],"is_obsolete":false,"name":"DNA-3-methylbase glycosylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA-3-methyladenine glycosylase III","type":"related"},{"name":"Mag III","type":"narrow"},{"name":"MagIII","type":"narrow"}],"termid":"GO:0043733","terms_by_termid":{"GO:0008725":null}}


id: PATO:0001505
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's not being in contact with another entity, or of no longer being connected or joined with another entity.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"separated from","synonyms":[{"name":"discontiguous","type":"related"},{"name":"divided_from","type":"related"},{"name":"splitted from","type":"related"}],"termid":"PATO:0001505"}


id: PBO:0086080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function with similarity to Tfs1p; transcription is activated by paralogous proteins Yrm1p and Yrr1p along with proteins involved in multidrug resistance; GFP-tagged protein localizes to the cytoplasm and nucleus","termid":"PBO:0086080"}


id: PBO:0003219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) polymerase Cid11 (predicted)","termid":"PBO:0003219"}


id: PBO:0001891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein Mis14","termid":"PBO:0001891"}


id: PBO:0041432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 open reading frame 89","termid":"PBO:0041432"}


id: PBO:0079712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquilin 4 pseudogene 2","termid":"PBO:0079712"}


id: PBO:0090004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp41","termid":"PBO:0090004"}


id: PBO:0000672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuine tRNA-ribosyltransferase (predicted)","termid":"PBO:0000672"}


id: FYPO:0002894
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a lower extent than normal during a cellular response to calcium ions. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription during vegetative growth","termid":"FYPO:0000781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"decreased transcription during cellular response to calcium ion","synonyms":[{"name":"decreased transcription during cellular response to calcium","type":"exact"},{"name":"decreased transcription during cellular response to calcium ion during mitotic cell cycle","type":"related"},{"name":"decreased transcription during cellular response to calcium ion during vegetative growth","type":"exact"},{"name":"decreased transcription in response to calcium","type":"exact"},{"name":"reduced transcription during cellular response to calcium ion","type":"exact"}],"termid":"FYPO:0002894"}


id: FYPO:0001280
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to oxidative stress is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during cellular response to oxidative stress","synonyms":[{"name":"decreased RNA accumulation during cellular response to oxidative stress","type":"related"},{"name":"decreased RNA level during cellular response to DEM","type":"narrow"},{"name":"decreased RNA level during cellular response to diethyl maleate","type":"narrow"},{"name":"decreased RNA level during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"decreased RNA level during oxidative stress response","type":"exact"},{"name":"decreased mRNA level during cellular response to oxidative stress","type":"narrow"},{"name":"decreased transcript level during cellular response to oxidative stress","type":"exact"},{"name":"reduced RNA level during cellular response to oxidative stress","type":"exact"}],"termid":"FYPO:0001280"}


id: PBO:0085096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear polyadenylated RNA-binding protein; required for export of poly(A)+ mRNA from the nucleus; proposed to couple mRNA export with 3' end processing via its interactions with Mex67p and Pcf11p; interacts with DBP2; inhibits the helicase activity of Dbp2; functionally redundant with Yra2p, another REF family member","termid":"PBO:0085096"}


id: PBO:0081746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 676","termid":"PBO:0081746"}


id: GO:1990696
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of four proteins, loss of which results in Usher Syndrome type 2 (USH2 syndrome), a leading genetic cause of combined hearing and vision loss. This complex is conserved in many species; in mice, it is composed of USH2A, GPR98 (aka ADGRV1), WHRN, and PDZD7.","definition_xrefs":["PMID:25406310","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"USH2 complex","synonyms":[{"name":"USH2 quaternary protein complex","type":"exact"}],"termid":"GO:1990696"}


id: _global:molecularly_interacts_with
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"An interaction relationship in which the two partners are molecular entities that directly physically interact with each other for example via a stable binding interaction or a brief interaction during which one modifies the other.","direct_ancestors":[{"relation_name":"is_a","term_name":"interacts_with","termid":"_global:interacts_with"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molecularly_interacts_with","secondary_identifiers":["RO:0002436"],"termid":"_global:molecularly_interacts_with"}


id: GO:0061608
data:
  {"annotated_genes":["SJAG_01909","SJAG_03470","SJAG_03662","SJAG_01789","SJAG_02425","SJAG_00840","SJAG_00968","SJAG_01083","SJAG_01534","SJAG_03959","SJAG_02998","SJAG_03693","SJAG_04411","SJAG_00586"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88905,91413,92883,92936,95249,95997,102058,102881,103170,106422,113957,115326,116761,118200],"is_not":false,"summary":null,"term":"GO:0061608"}]},"cv_name":"molecular_function","definition":"Combining with a nuclear import signal (NIS) on a cargo to be transported, to mediate transport of the cargo through the nuclear pore, from the cytoplasm to the nuclear lumen. The cargo can be either a RNA or a protein.","definition_xrefs":["PMID:28713609","Wikipedia:Nuclear_transport","GOC:dph","GOC:vw","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleocytoplasmic carrier activity","termid":"GO:0140142"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00586":null,"SJAG_00840":null,"SJAG_00968":null,"SJAG_01083":null,"SJAG_01534":null,"SJAG_01789":null,"SJAG_01909":null,"SJAG_02425":null,"SJAG_02998":null,"SJAG_03470":null,"SJAG_03662":null,"SJAG_03693":null,"SJAG_03959":null,"SJAG_04411":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140142"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140104"}],"interesting_parent_ids":["GO:0140142","GO:0003674","GO:0140104"],"is_obsolete":false,"name":"nuclear import signal receptor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"importin activity","type":"related"}],"termid":"GO:0061608","terms_by_termid":{"GO:0061608":null}}


id: GO:0071357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a type I interferon stimulus. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to type I interferon","termid":"GO:0034340"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to type I interferon","synonyms":[{"name":"cellular response to type I IFN","type":"exact"}],"termid":"GO:0071357"}


id: PBO:0049918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEY2 antisense RNA 1","termid":"PBO:0049918"}


id: PBO:0088031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin; becomes conjugated to proteins, marking them for selective degradation via ubiquitin-26S proteasome system; essential for cellular stress response; encoded as polyubiquitin precursor comprised of 5 head-to-tail repeats; number of repeats is evolutionarily unstable within and between yeast species; protein abundance increases in response to DNA replication stress; implicated as modulator of replicative lifespan","termid":"PBO:0088031"}


id: GO:0055070
data:
  {"annotated_genes":["SJAG_04403","SJAG_00668","SJAG_00802","SJAG_01694","SJAG_02399"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95768],"is_not":false,"summary":null,"term":"GO:0055070"},{"annotations":[107341,92615,74486,95769,99652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006878"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of copper ions within an organism or cell.","definition_xrefs":["GOC:mah","GOC:ai","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation homeostasis","termid":"GO:0055080"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00668":null,"SJAG_00802":null,"SJAG_01694":null,"SJAG_02399":null,"SJAG_04403":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"copper ion homeostasis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"copper homeostasis","type":"broad"}],"termid":"GO:0055070","terms_by_termid":{"GO:0006878":null,"GO:0055070":null}}


id: GO:0018073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of one or more bromine atoms to an amino acid residue in a protein.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete protein bromination (obsolete GO:0018073)","synonyms":[{"name":"protein amino acid bromination","type":"exact"}],"termid":"GO:0018073"}


id: GO:0060875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progession of the lateral semicircular canal from its initial formation to the mature structure.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"semicircular canal development","termid":"GO:0060872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral semicircular canal development","termid":"GO:0060875"}


id: GO:0100069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates neuron apoptotic process.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of neuron apoptotic process by transcription from RNA polymerase II promoter (obsolete GO:0100069)","termid":"GO:0100069"}


id: GO:0098935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of organelles or molecules along microtubules in dendrites.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axo-dendritic transport","termid":"GO:0008088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"dendritic transport","synonyms":[{"name":"dendrite cargo transport","type":"exact"}],"termid":"GO:0098935"}


id: PBO:0058607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6739","termid":"PBO:0058607"}


id: PBO:0017513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gluconate transmembrane transporter inducer Gti1","termid":"PBO:0017513"}


id: GO:0008462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of proteins to small peptides in the presence of ATP and magnesium. Alpha-casein is the usual test substrate. In the absence of ATP, only oligopeptides shorter than five residues are cleaved, for example, succinyl-Leu-Tyr-NHMec which is cleaved at the Tyr-NHMec bond, and Leu-Tyr-Leu-Tyr-Trp which is cleaved at the second Leu-Typ bond (cleavage of the Tyr-Leu and Tyr-Trp bonds also occurs).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete endopeptidase Clp activity (obsolete GO:0008462)","synonyms":[{"name":"ATP-dependent Clp protease","type":"narrow"},{"name":"Clp protease","type":"narrow"},{"name":"ClpP","type":"related"},{"name":"caseinolytic protease activity","type":"related"},{"name":"endopeptidase Clp activity","type":"exact"},{"name":"endopeptidase Ti activity","type":"related"},{"name":"protease Ti activity","type":"related"}],"termid":"GO:0008462"}


id: GO:0010280
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-D-glucose + NADPH + H+ = UDP-L-rhamnose + NADP+ + H2O.","definition_xrefs":["MetaCyc:RXN-5482","PMID:14701918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity","termid":"GO:0016740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"UDP-L-rhamnose synthase activity","synonyms":[{"name":"UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase-4-reductase activity","type":"narrow"}],"termid":"GO:0010280"}


id: PBO:0046118
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E binding protein 2 pseudogene 2","termid":"PBO:0046118"}


id: GO:0017004
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  {"annotated_genes":["SJAG_00217","SJAG_02480","SJAG_03322","SJAG_03337","SJAG_02229","SJAG_05398","SJAG_02979","SJAG_03399","SJAG_04553","SJAG_06392","SJAG_03099","SJAG_01141","SJAG_05199","SJAG_01140","SJAG_04116","SJAG_00449","SJAG_05302","SJAG_02975","SJAG_04348","SJAG_03046","SJAG_01996","SJAG_04560","SJAG_04603","SJAG_06002","SJAG_03873","SJAG_00852","SJAG_05305","SJAG_03296","SJAG_01405","SJAG_04639","SJAG_06046"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87538,105065,116452],"is_not":false,"summary":null,"term":"GO:0017004"},{"annotations":[103767,106975,116550,103519,114190,88700,106864,94157,88337,106661,114530,116709,117847,106350,91568,101624,94141,88505,102061,103264,91137,101195,95119,96846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033617"},{"annotations":[98509,108115,116541,107084,112345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034551"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a cytochrome complex. A cytochrome complex is a protein complex in which at least one of the proteins is a cytochrome, i.e. a heme-containing protein involved in catalysis of redox reactions.","definition_xrefs":["GOC:mah","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00217":null,"SJAG_00449":null,"SJAG_00852":null,"SJAG_01140":null,"SJAG_01141":null,"SJAG_01405":null,"SJAG_01996":null,"SJAG_02229":null,"SJAG_02480":null,"SJAG_02975":null,"SJAG_02979":null,"SJAG_03046":null,"SJAG_03099":null,"SJAG_03296":null,"SJAG_03322":null,"SJAG_03337":null,"SJAG_03399":null,"SJAG_03873":null,"SJAG_04116":null,"SJAG_04348":null,"SJAG_04553":null,"SJAG_04560":null,"SJAG_04603":null,"SJAG_04639":null,"SJAG_05199":null,"SJAG_05302":null,"SJAG_05305":null,"SJAG_05398":null,"SJAG_06002":null,"SJAG_06046":null,"SJAG_06392":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"cytochrome complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytochrome biogenesis","type":"broad"}],"termid":"GO:0017004","terms_by_termid":{"GO:0017004":null,"GO:0033617":null,"GO:0034551":null}}


id: PATO:0000445
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000445 relative percentage value (obsolete PATO:0000445)","termid":"PATO:0000445"}


id: GO:0070922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a single-stranded small RNA is incorporated within the RNA-initiated silencing complex (RISC). The assembly includes the maturation of the small RNA, the stabilization of the complex by accessory proteins of the RISC complex, duplex separation and the release of the second strand, forming a base-pairing complement complex that mediates gene silencing by small RNA.","definition_xrefs":["PMID:14744438","PMID:19239886","PMID:22233755","PMID:14512631","PMID:27184117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"regulatory ncRNA-mediated gene silencing","termid":"GO:0031047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"RISC complex assembly","secondary_identifiers":["GO:0035280","GO:0035087","GO:0070923"],"synonyms":[{"name":"RISC assembly","type":"related"},{"name":"gene silencing by RNA, small RNA loading onto RISC","type":"related"},{"name":"miRISC assembly","type":"broad"},{"name":"miRNA loading onto RISC","type":"narrow"},{"name":"siRNA loading onto RISC involved in RNA interference","type":"narrow"},{"name":"siRNA loading onto RISC involved in gene silencing by small RNA","type":"narrow"},{"name":"small RNA loading onto RISC","type":"related"}],"termid":"GO:0070922"}


id: GO:0102028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-cysteine + O-phosphonato-L-homoserine = L-cystathionine + hydrogenphosphate.","definition_xrefs":["PMID:5922970","GOC:pz","PMID:9531508"],"gene_count":0,"genotype_count":0,"name":"obsolete cystathionine gamma-synthase activity (acts on O-phosphohomoserine) (obsolete GO:0102028)","termid":"GO:0102028"}


id: PBO:0072967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1B member 2, pseudogene","termid":"PBO:0072967"}


id: PBO:0026870
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K4_methylation_at_mating_type_locus","termid":"PBO:0026870"}


id: FYPO:0003056
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the cell does not contain a detectable Mei2 nuclear dot complex.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"},{"relation_name":"is_a","term_name":"altered level of macromolecular complex","termid":"FYPO:0007316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"Mei2 nuclear dot absent from cell","synonyms":[{"name":"Mei2 nuclear dot absent from cell during meiotic cell cycle","type":"exact"},{"name":"Mei2 nuclear dot complex absent from cell","type":"exact"},{"name":"absence of Mei2 dot","type":"exact"},{"name":"absent Mei2 nuclear dot","type":"exact"},{"name":"meiRNA nuclear dot absent from cell","type":"related"}],"termid":"FYPO:0003056"}


id: MONDO:0009404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypertelorism-microtia-facial clefting syndrome, or HMC syndrome, is a very rare syndrome characterized by the combination of hypertelorism, cleft lip and palate and microtia.","definition_xrefs":["Orphanet:2213"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"hypertelorism, microtia, facial clefting syndrome","secondary_identifiers":["MEDGEN:113104","UMLS:C0220742","DOID:14670","OMIM:239800","MESH:C537632","SCTID:721836009","GARD:897"],"synonyms":[{"name":"Bixler Christian Gorlin syndrome","type":"exact"},{"name":"Bixler syndrome","type":"exact"},{"name":"Bixler-Christian-Gorlin syndrome","type":"exact"},{"name":"HMC syndrome","type":"exact"},{"name":"hypertelorism microtia facial clefting syndrome","type":"related"},{"name":"hypertelorism, microtia, facial clefting syndrome","type":"exact"},{"name":"hypertelorism-microtia-clefting syndrome","type":"exact"},{"name":"hypertelorism-microtia-facial clefting syndrome","type":"exact"}],"termid":"MONDO:0009404","xrefs":{"Monarch":{"xref_id":"0009404"}}}


id: PBO:0000481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 3 Pac10 (predicted)","termid":"PBO:0000481"}


id: MONDO:0100015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"segmental dystonia","termid":"MONDO:0000479"},{"relation_name":"is_a","term_name":"focal, segmental or multifocal dystonia","termid":"MONDO:0015990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"adult-onset segmental dystonia","synonyms":[{"name":"DYT-GNAL","type":"exact"},{"name":"an adult-onset, focal or segmental, isolated dystonia that is characterised by cervical or cranial dystonia that often begins in the fourth decade (range 7-54 years).","type":"exact"},{"name":"an adult-onset, focal or segmental, isolated dystonia that is characterized by cervical or cranial dystonia that often begins in the fourth decade (range 7-54 years).","type":"exact"}],"termid":"MONDO:0100015","xrefs":{"Monarch":{"xref_id":"0100015"}}}


id: PBO:0026679
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_dithiothreitol","termid":"PBO:0026679"}


id: MONDO:0004543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A yolk sac tumor that arises from the testis and is characterized by the presence of immature glands.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular yolk sac tumor","termid":"MONDO:0003402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"enteric pattern testicular yolk sac tumor","secondary_identifiers":["DOID:8362","NCIT:C39932","UMLS:C1515304","MEDGEN:308261"],"synonyms":[{"name":"testicular yolk Sac tumor, enteric pattern","type":"exact"}],"termid":"MONDO:0004543","xrefs":{"Monarch":{"xref_id":"0004543"}}}


id: MONDO:0003900
data:
  {"annotated_genes":["SJAG_04541","SJAG_02039","SJAG_04969","SJAG_04287","SJAG_05979","SJAG_04077","SJAG_01474","SJAG_01748","SJAG_00321","SJAG_03905","SJAG_00031","SJAG_04290","SJAG_03596","SJAG_03805","SJAG_01151","SJAG_04118","SJAG_00853","SJAG_02855","SJAG_04865","SJAG_05239","SJAG_02763","SJAG_03881","SJAG_01013","SJAG_03429","SJAG_01349","SJAG_03785","SJAG_01344","SJAG_01884","SJAG_03151","SJAG_05213","SJAG_03453","SJAG_00400","SJAG_04380","SJAG_04569"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86847,86694,86848,86692,86693,86695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"},{"annotations":[84833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012429"},{"annotations":[84663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012471"},{"annotations":[84666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012472"},{"annotations":[84752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014007"},{"annotations":[86761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014629"},{"annotations":[86716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013944"},{"annotations":[84660,84658,84659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009925"},{"annotations":[85653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0002629"},{"annotations":[84820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[86218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"},{"annotations":[86277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007205"},{"annotations":[85515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007483"},{"annotations":[86134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013766"},{"annotations":[86238,86237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009849"},{"annotations":[85155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007767"},{"annotations":[85156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007768"},{"annotations":[85380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012316"},{"annotations":[84561,84560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012481"},{"annotations":[86173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007908"},{"annotations":[86233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054698"},{"annotations":[86044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054700"},{"annotations":[84917,84916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054699"},{"annotations":[84616,84615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011462"},{"annotations":[85918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024541"},{"annotations":[85769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013818"},{"annotations":[85386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026777"},{"annotations":[85135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010523"}]},"cv_name":"mondo","definition":"A disease involving the connective tissue.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"},{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00321":null,"SJAG_00400":null,"SJAG_00853":null,"SJAG_01013":null,"SJAG_01151":null,"SJAG_01344":null,"SJAG_01349":null,"SJAG_01474":null,"SJAG_01748":null,"SJAG_01884":null,"SJAG_02039":null,"SJAG_02763":null,"SJAG_02855":null,"SJAG_03151":null,"SJAG_03429":null,"SJAG_03453":null,"SJAG_03596":null,"SJAG_03785":null,"SJAG_03805":null,"SJAG_03881":null,"SJAG_03905":null,"SJAG_04077":null,"SJAG_04118":null,"SJAG_04287":null,"SJAG_04290":null,"SJAG_04380":null,"SJAG_04541":null,"SJAG_04569":null,"SJAG_04865":null,"SJAG_04969":null,"SJAG_05213":null,"SJAG_05239":null,"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"connective tissue disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:105969002","EFO:1001986","NANDO:2100172","DOID:65","MEDGEN:1098","MESH:D003240","NCIT:C26729","UMLS:C0009782"],"synonyms":[{"name":"connective tissue disease","type":"exact"},{"name":"connective tissue disease or disorder","type":"exact"},{"name":"connective tissue diseases","type":"exact"},{"name":"connective tissue disorder","type":"exact"},{"name":"connective tissue disorders","type":"exact"},{"name":"disease of connective tissue","type":"exact"},{"name":"disease or disorder of connective tissue","type":"exact"},{"name":"disease, connective tissue","type":"exact"},{"name":"disorder of connective tissue","type":"exact"},{"name":"primary disorder of connective tissue","type":"exact"},{"name":"tissue disease, 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id: GO:0045596
data:
  {"annotated_genes":["SJAG_02169","SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[90207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"negatively_regulates","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02169":null,"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell differentiation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cell differentiation","type":"exact"},{"name":"down-regulation of cell differentiation","type":"exact"},{"name":"downregulation of cell differentiation","type":"exact"},{"name":"inhibition of cell differentiation","type":"narrow"}],"termid":"GO:0045596","terms_by_termid":{"GO:0051517":null,"GO:0075297":null}}


id: FYPO:0006038
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which the initiation of translation in the cytoplasm is normal (i.e. indistinguishable from wild type). Translational initiation is he process preceding formation of the peptide bond between the first two amino acids of a protein in the cytoplasm.","definition_xrefs":["PomBase:mah","GO:0002183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation phenotype","termid":"FYPO:0000291"},{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal cytoplasmic translational initiation","synonyms":[{"name":"normal cytoplasmic translation initiation","type":"exact"},{"name":"normal cytoplasmic translational initiation during mitotic cell cycle","type":"related"},{"name":"normal cytoplasmic translational initiation during vegetative growth","type":"exact"}],"termid":"FYPO:0006038"}


id: PBO:0088970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid family protease, unknown biological role, associated with COP1 coated vesicle","termid":"PBO:0088970"}


id: MONDO:0014008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphohydroxylysinuria","secondary_identifiers":["UMLS:C3554344","MEDGEN:767258","OMIM:615011"],"synonyms":[{"name":"PHLU","type":"related"},{"name":"PHOSPHOHYDROXYLYSINURIA","type":"related"},{"name":"Phosphohydroxylysinuria","type":"exact"},{"name":"phosphohydroxylysinuria","type":"exact"}],"termid":"MONDO:0014008","xrefs":{"Monarch":{"xref_id":"0014008"}}}


id: PBO:0044709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 10","termid":"PBO:0044709"}


id: PBO:0003305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis inducing protein Mei3","termid":"PBO:0003305"}


id: PBO:0060955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFKB inhibitor alpha","termid":"PBO:0060955"}


id: GO:0008552
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: Me2+(in) + ATP = Me2+(out) + ADP + phosphate, where Me is Zn2+, Cd2+, Co2+, Ni2+ or Pb2+.","definition_xrefs":["TC:3.A.3.6.2"],"gene_count":0,"genotype_count":0,"name":"obsolete zinc, cadmium, cobalt, nickel, lead-efflux ATPase activity (obsolete GO:0008552)","synonyms":[{"name":"zinc, cadmium, cobalt, nickel, lead-efflux ATPase activity","type":"exact"}],"termid":"GO:0008552"}


id: GO:1990457
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded intracellular vesicle involved in the degradation of peroxisome by macropexophagy.","definition_xrefs":["PMID:22536249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phagocytic vesicle","termid":"GO:0045335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"pexophagosome","termid":"GO:1990457"}


id: PBO:0026826
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rate_of_DNA_strand_elongation_involved_in_mitotic_DNA_replication","termid":"PBO:0026826"}


id: GO:0043032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stimulates, induces or increases the rate of macrophage activation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte activation","termid":"GO:0002696"},{"relation_name":"is_a","term_name":"regulation of macrophage activation","termid":"GO:0043030"},{"relation_name":"positively_regulates","term_name":"macrophage activation","termid":"GO:0042116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage activation","synonyms":[{"name":"activation of macrophage activation","type":"narrow"},{"name":"positive regulation of macrophage polarization","type":"exact"},{"name":"stimulation of macrophage activation","type":"narrow"},{"name":"up regulation of macrophage activation","type":"exact"},{"name":"up-regulation of macrophage activation","type":"exact"},{"name":"upregulation of macrophage activation","type":"exact"}],"termid":"GO:0043032"}


id: PBO:0058465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5194","termid":"PBO:0058465"}


id: GO:1902814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:mr","PMID:10499580"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry (obsolete GO:1902814)","synonyms":[{"name":"activation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"narrow"},{"name":"activation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"narrow"},{"name":"activation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"narrow"},{"name":"positive regulation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"positive regulation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"up regulation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"up regulation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"up regulation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"up-regulation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"up-regulation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"up-regulation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"upregulation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"upregulation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"upregulation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"}],"termid":"GO:1902814"}


id: GO:0006140
data:
  {"annotated_genes":["SJAG_04422","SJAG_05314","SJAG_02785","SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75550,72581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[89168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"},{"annotations":[88690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006110"},{"annotations":[117502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905706"},{"annotations":[75549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving nucleotides.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"nucleotide metabolic process","termid":"GO:0009117"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_02785":null,"SJAG_04422":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"regulation of nucleotide metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of nucleotide metabolism","type":"exact"}],"termid":"GO:0006140","terms_by_termid":{"GO:0006110":null,"GO:0043456":null,"GO:0045820":null,"GO:1905706":null,"GO:1905857":null}}


id: MONDO:0016496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Guillain-Barre syndrome","termid":"MONDO:0016218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"pharyngeal-cervical-brachial variant of Guillain-Barre syndrome","secondary_identifiers":["Orphanet:231426","MEDGEN:1682775","GARD:20614","UMLS:C5190783"],"synonyms":[{"name":"PCB variant of GBS","type":"exact"},{"name":"PCB variant of Guillain-Barre syndrome","type":"exact"},{"name":"PCB variant of Guillain-Barré syndrome","type":"exact"},{"name":"pharyngeal-cervical-brachial variant of Guillain-Barré syndrome","type":"related"},{"name":"pharyngeal-cervical-brachial weakness","type":"exact"},{"name":"pharyngo-cervico-brachial variant of GBS","type":"exact"},{"name":"pharyngo-cervico-brachial variant of Guillain-Barre syndrome","type":"exact"},{"name":"pharyngo-cervico-brachial variant of Guillain-Barré syndrome","type":"exact"}],"termid":"MONDO:0016496","xrefs":{"Monarch":{"xref_id":"0016496"}}}


id: MONDO:0008246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pigmented paravenous retinochoroidal atrophy (PPRCA) is a rare, commonly bilateral and symmetric retinal disease characterized by non-progressive or slowly progressive chorioretinal atrophy, peripapillary pigmentary changes and accumulation of ''bone-corpuscle'' pigmentation along the retinal veins and which is usually asymptomatic or can present with mild blurred vision.","definition_xrefs":["Orphanet:251295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"pigmented paravenous retinochoroidal atrophy","secondary_identifiers":["icd11.foundation:1278139412","ICD10CM:H35.5","SCTID:723450004","GARD:17208","OMIM:172870","MEDGEN:401413","MESH:C566801","UMLS:C1868310","DOID:0111541"],"synonyms":[{"name":"PPCRA","type":"related"},{"name":"PPRCA","type":"exact"},{"name":"pigmented paravenous chorioretinal atrophy","type":"related"}],"termid":"MONDO:0008246","xrefs":{"Monarch":{"xref_id":"0008246"}}}


id: PBO:0035738
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_methylation_during_vegetative_growth","termid":"PBO:0035738"}


id: PBO:0062674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 14 subfamily A member 16","termid":"PBO:0062674"}


id: GO:0110162
data:
  {"annotated_genes":["SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114547],"is_not":false,"summary":null,"term":"GO:0110162"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the cell cycle process in which the distance is lengthened between poles of the mitotic spindle during mitotic anaphase B (spindle phase three).","definition_xrefs":["PMID:27697865","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic spindle elongation","termid":"GO:0032888"},{"relation_name":"is_a","term_name":"regulation of mitotic spindle organization","termid":"GO:0060236"},{"relation_name":"regulates","term_name":"mitotic spindle elongation (spindle phase three)","termid":"GO:0061805"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00244":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007049","GO:0007010","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic spindle elongation (spindle phase three)","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110162","terms_by_termid":{"GO:0110162":null}}


id: GO:0099612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to or maintained in a location within an axon.","definition_xrefs":["GOC:dos","PMID:26157139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to axon","termid":"GO:0099612"}


id: MONDO:0008114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by the presence of persistent and recurrent irrational thoughts (obsessions), resulting in marked anxiety and repetitive excessive behaviors (compulsions) as a way to try to decrease that anxiety.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anxiety disorder","termid":"MONDO:0005618"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obsessive-compulsive disorder","secondary_identifiers":["OMIM:164230","ICD10CM:F42","ICD9:300.3","MESH:D009771","MEDGEN:14445","NCIT:C88411","DOID:10933","icd11.foundation:1582741816","SCTID:191736004","UMLS:C0028768","EFO:0004242"],"synonyms":[{"name":"Anancastic neurosis","type":"exact"},{"name":"OCD","type":"related"},{"name":"obsessive compulsive disorder","type":"exact"},{"name":"obsessive-compulsive disorder","type":"exact"},{"name":"obsessive-compulsive disorder, susceptibility to","type":"exact"}],"termid":"MONDO:0008114","xrefs":{"Monarch":{"xref_id":"0008114"}}}


id: MONDO:0000727
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85370,85371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008409"}]},"cv_name":"mondo","definition":"A muscular dystrophy which begins at the lower legs and affects the shoulder region earlier and more severely than distal arm.","definition_xrefs":["PMID:28179901","DOID:0060253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Emery-Dreifuss muscular dystrophy","termid":"MONDO:0016830"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005336"],"is_obsolete":false,"name":"scapuloperoneal myopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C536624","UMLS:C2931268","MEDGEN:419759"],"synonyms":[{"name":"myopathy, scapuloperoneal","type":"related"},{"name":"scapuloperoneal syndrome, myopathic type","type":"related"}],"termid":"MONDO:0000727","terms_by_termid":{"MONDO:0008409":null},"xrefs":{"Monarch":{"xref_id":"0000727"}}}


id: GO:1905034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an antifungal innate immune response.","definition_xrefs":["PMID:22470487","GO_REF:0000058","GOC:dph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"is_a","term_name":"regulation of defense response to fungus","termid":"GO:1900150"},{"relation_name":"regulates","term_name":"antifungal innate immune response","termid":"GO:0061760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antifungal innate immune response","termid":"GO:1905034"}


id: PBO:0080899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta pseudogene 2","termid":"PBO:0080899"}


id: PBO:0028617
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_U2_snRNP_binding","termid":"PBO:0028617"}


id: PBO:0004969
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.1.3.3","termid":"PBO:0004969"}


id: PBO:0064184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XK, pseudogene","termid":"PBO:0064184"}


id: PBO:0041040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA1 pseudogene 1","termid":"PBO:0041040"}


id: PBO:0087337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Specificity factor required for Rsp5p-dependent ubiquitination; also required for sorting of cargo proteins at the multivesicular body; identified as a high-copy suppressor of a SHR3 deletion, increasing steady-state levels of amino acid permeases","termid":"PBO:0087337"}


id: FYPO:0000157
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype observed in the vegetative growth phase of the life cycle in which the response to DNA damage is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to stress during vegetative growth","termid":"FYPO:0001341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000298"],"is_obsolete":false,"name":"abnormal response to DNA damage stimulus during vegetative growth","synonyms":[{"name":"abnormal response to DNA damage during vegetative growth","type":"exact"},{"name":"abnormal response to DNA damage stimulus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000157"}


id: PBO:0084236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Imidazoleglycerol-phosphate dehydratase; catalyzes the sixth step in histidine biosynthesis; mutations cause histidine auxotrophy and sensitivity to Cu, Co, and Ni salts; transcription is regulated by general amino acid control via Gcn4p","termid":"PBO:0084236"}


id: PBO:0046714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eva-1 homolog C","termid":"PBO:0046714"}


id: PATO:0000687
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000687 relative rate value (obsolete PATO:0000687)","termid":"PATO:0000687"}


id: PBO:0071021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 23","termid":"PBO:0071021"}


id: GO:0015703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of chromate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"chromate transport","termid":"GO:0015703"}


id: GO:0102842
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:1-2-16:2-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:1-2-16:3-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:1-2-16:2-monogalactosyldiacylglycerol desaturase activity (SN2-16:3 forming) (obsolete GO:0102842)","termid":"GO:0102842"}


id: PR:000027731
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A myosin type-2 heavy chain 1 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PomBase:MAH","PMID:15184401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin type-2 heavy chain 1","termid":"PR:000027728"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myo2/UnMod","pombase_gene_id":"SPCC645.05c","synonyms":[{"name":"PomBase_original_PRO_term_name: myosin type-2 heavy chain 1 unmodified form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-myo2/UnMod","type":"exact"},{"name":"myo2/UnMod","type":"exact"}],"termid":"PR:000027731"}


id: MONDO:0019836
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital anomaly of hepatic vein","secondary_identifiers":["MEDGEN:756237","GARD:19282","UMLS:C3163825","Orphanet:95507"],"termid":"MONDO:0019836","xrefs":{"Monarch":{"xref_id":"0019836"}}}


id: MONDO:0037937
data:
  {"annotated_genes":["SJAG_00964"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014647"}]},"cv_name":"mondo","definition":"A disease that has its basis in the disruption of pyrimidine nucleobase metabolic process.","definition_xrefs":["MONDO:patterns/basis_in_disruption_of_process"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"pyrimidine metabolism disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:85444005"],"synonyms":[{"name":"disorder of pyrimidine metabolism","type":"exact"},{"name":"disorder of pyrimidine nucleobase metabolic process","type":"exact"},{"name":"pyrimidine nucleobase metabolic process disease","type":"exact"}],"termid":"MONDO:0037937","terms_by_termid":{"MONDO:0014647":null},"xrefs":{"Monarch":{"xref_id":"0037937"}}}


id: GO:0035479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of angioblasts from the lateral mesoderm to the midline which occurs as part of the formation of the early midline vasculature.","definition_xrefs":["PMID:11861480","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angioblast cell migration","termid":"GO:0035476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"angioblast cell migration from lateral mesoderm to midline","termid":"GO:0035479"}


id: PBO:0075740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP54 antisense RNA 1","termid":"PBO:0075740"}


id: MONDO:0031083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 77","secondary_identifiers":["UMLS:C5774245","MEDGEN:1824018","DOID:0070576","OMIM:620103"],"synonyms":[{"name":"SPGF77","type":"exact"},{"name":"spermatogenic failure 77","type":"exact"}],"termid":"MONDO:0031083","xrefs":{"Monarch":{"xref_id":"0031083"}}}


id: GO:0001675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the acrosome from the spermatid Golgi.","definition_xrefs":["GOC:dph","GOC:tb","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"secretory granule organization","termid":"GO:0033363"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"},{"relation_name":"part_of","term_name":"spermatid development","termid":"GO:0007286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"acrosome assembly","synonyms":[{"name":"acrosome formation","type":"exact"}],"termid":"GO:0001675"}


id: PBO:0012544
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ApsixA hydrolase","termid":"PBO:0012544"}


id: PBO:0045229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C17","termid":"PBO:0045229"}


id: GO:0003843
data:
  {"annotated_genes":["SJAG_00876","SJAG_02222","SJAG_01288","SJAG_03587","SJAG_05285"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91081,93949,105597,112658,115318],"is_not":false,"summary":null,"term":"GO:0003843"},{"annotations":[115319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140752"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + [(1->3)-beta-D-glucosyl](n) = UDP + [(1->3)-beta-D-glucosyl](n+1).","definition_xrefs":["EC:2.4.1.34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00876":null,"SJAG_01288":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"1,3-beta-D-glucan synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:21476","GO:0009981","MetaCyc:13-BETA-GLUCAN-SYNTHASE-RXN"],"synonyms":[{"name":"(1,3)-beta-glucan (callose) synthase activity","type":"related"},{"name":"1,3-beta-D-glucan synthetase activity","type":"related"},{"name":"1,3-beta-D-glucan-UDP glucosyltransferase activity","type":"related"},{"name":"1,3-beta-glucan synthase activity","type":"related"},{"name":"1,3-beta-glucan-uridine diphosphoglucosyltransferase activity","type":"related"},{"name":"GS-II","type":"related"},{"name":"UDP-glucose-1,3-beta-D-glucan glucosyltransferase activity","type":"related"},{"name":"UDP-glucose-1,3-beta-glucan glucosyltransferase activity","type":"related"},{"name":"UDP-glucose-beta-glucan glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:(1,3)beta-glucan synthase activity","type":"related"},{"name":"UDP-glucose:1,3-beta-D-glucan 3-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose-1,3-beta-D-glucan glucosyltransferase activity","type":"related"},{"name":"UDPglucose:1,3-beta-D-glucan 3-beta-D-glucosyltransferase activity","type":"related"},{"name":"beta-1,3-glucan synthase activity","type":"exact"},{"name":"beta-1,3-glucan synthetase activity","type":"related"},{"name":"callose synthase activity","type":"exact"},{"name":"callose synthetase activity","type":"related"},{"name":"paramylon synthetase","type":"related"},{"name":"uridine diphosphoglucose-1,3-beta-glucan glucosyltransferase activity","type":"related"}],"termid":"GO:0003843","terms_by_termid":{"GO:0003843":null,"GO:0140752":null}}


id: MOD:02006
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfanyl group with a stearoylsulfanyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"S-acylated residue","termid":"MOD:00672"},{"relation_name":"is_a","term_name":"stearoylated residue","termid":"MOD:02001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"S-stearoylated residue","termid":"MOD:02006"}


id: MONDO:0017675
data:
  {"annotated_genes":["SJAG_05011"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007858"}]},"cv_name":"mondo","definition":"A palmoplantar keratosis characterized by keratoses with a \\\"raindrop\\\" pattern on the palmoplantar surface, skin lesions which may involve the whole of the palmoplantar surface, or may be more restricted in their distribution.","definition_xrefs":["DOID:0060361","Wikipedia:Palmoplantar_keratoderma#Punctate"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary palmoplantar keratoderma","termid":"MONDO:0019272"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"punctate palmoplantar keratoderma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:21297","SCTID:402773000","Orphanet:307967","MEDGEN:870406","UMLS:C4024851","icd11.foundation:1212361548"],"synonyms":[{"name":"punctate PPK","type":"exact"},{"name":"punctate keratosis palmoplantaris","type":"exact"},{"name":"punctate palmoplantar hyperkeratosis","type":"exact"}],"termid":"MONDO:0017675","terms_by_termid":{"MONDO:0007858":null},"xrefs":{"Monarch":{"xref_id":"0017675"}}}


id: MONDO:0005791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral infectious disease that results in infection located in mouth, has material basis in Human coxsackievirus A16, has material basis in Human enterovirus 71, has material basis in group B coxsackievirus, or has material basis in echoviruses, which are transmitted by ingestion of food contaminated with feces, transmitted by contact with pharyngeal secretions, or transmitted by droplet spread of oronasal secretions. The infection has symptom fever, has symptom sore throat, and has symptom lesions in the back area of the mouth, particularly the soft palate or tonsillar pillars.","definition_xrefs":["DOID:10883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"herpangina","secondary_identifiers":["UMLS:C0019338","ICD9:074.0","MEDGEN:42435","EFO:0007306","MESH:D006557","SCTID:274102007"],"synonyms":[{"name":"vesicular pharyngitis","type":"exact"}],"termid":"MONDO:0005791","xrefs":{"Monarch":{"xref_id":"0005791"}}}


id: PBO:0109656
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae MDI1","termid":"PBO:0109656"}


id: MONDO:0001567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephrocalcinosis is a disorder that occurs when too much calcium is deposited in the kidneys. It commonly occurs in premature infants. Individuals may not have symptoms or may have symptoms related to thecondition causing nephrocalcinosis. If kidney stones are present, symptoms may include blood in the urine, fever and chills, nausea and vomiting, and severe pain in the belly area, sides of the back (flank), groin, or testicles. Later symptoms may be associated with chronic kidney failure. It may be caused by use of certain medications or supplements, infection, or any condition that leads to high levels of calcium in the blood or urine including hyperparathyroidism, renal tubular acidosis, Alport syndrome, Bartter syndrome,and a variety of other conditions. Some of the underlying disorders that can cause nephrocalcinosis are genetic, with the inheritance pattern depending on the specific disorder. Treatment differs depending on the cause of nephrocalcinosis and often aims to prevent more calcium from being deposited in the kidneys.","direct_ancestors":[{"relation_name":"is_a","term_name":"calcinosis","termid":"MONDO:0002123"},{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005240"],"is_obsolete":false,"name":"nephrocalcinosis","secondary_identifiers":["UMLS:C0027709","DOID:12679","ICD9:275.49","icd11.foundation:1359282431","MEDGEN:10222","NCIT:C84918","SCTID:48638002","MESH:D009397"],"synonyms":[{"name":"hypercalcemic nephropathy","type":"related"}],"termid":"MONDO:0001567","xrefs":{"Monarch":{"xref_id":"0001567"}}}


id: GO:0016006
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A product of the fusion of the mitochondria during spermatogenesis. After the completion of meiosis the mitochondria of the spermatid collect along side the nucleus and fuse into two masses; these wrap around each other to produce the spherical Nebenkern. During flagellum elongation the Nebenkern unfolds and the two derivatives (major and minor mitochondrial derivatives) elongate down the axoneme.","definition_xrefs":["PMID:25265054","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial derivative","termid":"GO:0016007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Nebenkern","termid":"GO:0016006"}


id: PBO:0054623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2028","termid":"PBO:0054623"}


id: FYPO:0000325
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the attachment of spindle microtubules to the kinetochore during a mitotic or meiotic nuclear division is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome segregation","termid":"FYPO:0000029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal attachment of spindle microtubules to kinetochore","termid":"FYPO:0000325"}


id: PR:P87175
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-(apurinic or apyrimidinic site) lyase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02802","PANTHER:PTHR22748:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-(apurinic or apyrimidinic site) lyase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.10","secondary_identifiers":["UniProtKB:P87175"],"synonyms":[{"name":"AP endonuclease 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-APEX2","type":"exact"},{"name":"apurinic-apyrimidinic endonuclease 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87175"}


id: FYPO:0003509
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing selenite ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002057","FYPO:0000139","FYPO:0000003","FYPO:0002060","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on selenite ion","synonyms":[{"name":"normal cell population growth in presence of selenite ion","type":"exact"},{"name":"normal cell population growth on selenite ion","type":"exact"},{"name":"normal cellular response to selenite ion","type":"related"},{"name":"normal growth on selenite","type":"exact"},{"name":"normal vegetative cell population growth on selenite ion","type":"exact"}],"termid":"FYPO:0003509"}


id: SO:0000014
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence element characteristic of some RNA polymerase II promoters required for the correct positioning of the polymerase for the start of transcription. Overlaps the TSS. The mammalian consensus sequence is YYAN(T|A)YY; the Drosophila consensus sequence is TCA(G|T)t(T|C). In each the A is at position +1 with respect to the TSS. Functionally similar to the TATA box element.","definition_xrefs":["PMID:12651739","PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_II_core_promoter","termid":"SO:0001669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INR_motif","synonyms":[{"name":"DMp2","type":"related"},{"name":"INR motif","type":"exact"},{"name":"initiator","type":"exact"},{"name":"initiator motif","type":"exact"}],"termid":"SO:0000014"}


id: PBO:0030666
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_25S_rRNA_level","termid":"PBO:0030666"}


id: FYPO:0007061
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin monomers associate to form a new branch on the side of an existing actin filament, mediated by the Arp2/3 protein complex, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cytoskeleton organization","termid":"FYPO:0001366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal Arp2/3 complex-mediated actin nucleation","synonyms":[{"name":"normal Arp2/3 complex-mediated actin filament nucleation","type":"exact"},{"name":"normal Arp2/3 complex-mediated actin nucleation during mitotic cell cycle","type":"related"},{"name":"normal Arp2/3 complex-mediated actin nucleation during vegetative growth","type":"exact"},{"name":"normal actin filament branch nucleation","type":"exact"},{"name":"normal branched actin filament nucleation","type":"exact"}],"termid":"FYPO:0007061"}


id: PATO:0001637
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of single process inhering in a bearer by virtue of whether the bearer is essential or indispensable.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necessity of occurrent","termid":"PATO:0001637"}


id: MONDO:0017293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete small cell carcinoma of the bladder (obsolete MONDO:0017293)","termid":"MONDO:0017293","xrefs":{"Monarch":{"xref_id":"0017293"}}}


id: MONDO:0017644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare tremor disorder (obsolete MONDO:0017644)","secondary_identifiers":["Orphanet:306712"],"termid":"MONDO:0017644","xrefs":{"Monarch":{"xref_id":"0017644"}}}


id: PBO:0000186
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.4.4.2","termid":"PBO:0000186"}


id: PBO:0080973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 8 opposite strand pseudogene 2","termid":"PBO:0080973"}


id: PBO:0090525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit Tho1","termid":"PBO:0090525"}


id: PBO:0060122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 23","termid":"PBO:0060122"}


id: GO:0032758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-9 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-9 production","termid":"GO:0032678"},{"relation_name":"positively_regulates","term_name":"interleukin-9 production","termid":"GO:0032638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-9 production","secondary_identifiers":["GO:0045419"],"synonyms":[{"name":"activation of interleukin-9 production","type":"narrow"},{"name":"positive regulation of IL-9 production","type":"exact"},{"name":"positive regulation of interleukin-9 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-9 production","type":"narrow"},{"name":"up regulation of interleukin-9 production","type":"exact"},{"name":"up-regulation of interleukin-9 production","type":"exact"},{"name":"upregulation of interleukin-9 production","type":"exact"}],"termid":"GO:0032758"}


id: PBO:0077364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM105 long non-coding RNA","termid":"PBO:0077364"}


id: PBO:0072407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 12","termid":"PBO:0072407"}


id: GO:0002156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of thyroid hormone mediated signaling pathway.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of thyroid hormone receptor signaling pathway","termid":"GO:0002155"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"thyroid hormone receptor signaling pathway","termid":"GO:0002154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of thyroid hormone receptor signaling pathway","synonyms":[{"name":"negative regulation of thyroid hormone mediated signaling pathway","type":"exact"},{"name":"negative regulation of thyroid hormone mediated signalling pathway","type":"exact"}],"termid":"GO:0002156"}


id: FYECO:0000253
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ammonium was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited ammonium","synonyms":[{"name":"+ limited NH4Cl","type":"related"}],"termid":"FYECO:0000253"}


id: PBO:0057048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 135b","termid":"PBO:0057048"}


id: PBO:0045351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DONSON pseudogene 1","termid":"PBO:0045351"}


id: PBO:0088023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP protein involved in splicing; interacts with the branchpoint-binding protein during the formation of the second commitment complex","termid":"PBO:0088023"}


id: MONDO:0007106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anal sphincter dysplasia","secondary_identifiers":["OMIM:105563","UMLS:C1862936","MESH:C538254","MEDGEN:350794"],"synonyms":[{"name":"ASDP","type":"related"},{"name":"anal sphincter dysplasia","type":"exact"}],"termid":"MONDO:0007106","xrefs":{"Monarch":{"xref_id":"0007106"}}}


id: PBO:0090370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SBF complex transcription corepressor, Whi5","termid":"PBO:0090370"}


id: PBO:0050320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 22","termid":"PBO:0050320"}


id: GO:0036181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular protein localization process in which a protein is transported to, or maintained at, a linear element. A linear element is a proteinaceous scaffold associated with S. pombe chromosomes during meiotic prophase.","definition_xrefs":["GOC:mah","PMID:19756689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to condensed nuclear chromosome","termid":"GO:1903084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to linear element","synonyms":[{"name":"protein localisation to linear element","type":"exact"}],"termid":"GO:0036181"}


id: GO:2001224
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuron migration.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"regulation of neuron migration","termid":"GO:2001222"},{"relation_name":"positively_regulates","term_name":"neuron migration","termid":"GO:0001764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuron migration","synonyms":[{"name":"positive regulation of neuron chemotaxis","type":"exact"},{"name":"positive regulation of neuron guidance","type":"related"},{"name":"positive regulation of neuronal migration","type":"exact"}],"termid":"GO:2001224"}


id: PBO:0051353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2/OR2-4 (pseudogene)","termid":"PBO:0051353"}


id: GO:0002097
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  {"annotated_genes":["SJAG_05023","SJAG_03896","SJAG_03677","SJAG_01877","SJAG_00579","SJAG_04189","SJAG_01302","SJAG_00358","SJAG_02302","SJAG_04756","SJAG_03616","SJAG_00186","SJAG_04367","SJAG_01418","SJAG_02099","SJAG_04704","SJAG_05249","SJAG_03932","SJAG_04380","SJAG_00352","SJAG_04175","SJAG_01024","SJAG_04452","SJAG_00235","SJAG_04113"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116454,93751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990799"},{"annotations":[92278,107964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070899"},{"annotations":[103450,103738,100609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002100"},{"annotations":[100071,94950,108978,109646,113466,118275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002926"},{"annotations":[87739,93410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002127"},{"annotations":[92097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002101"},{"annotations":[95477,105351,107900,116693,106369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002143"},{"annotations":[87265,95544,105049,118143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002098"}]},"cv_name":"biological_process","definition":"The process in which the nucleotide at position 34 in the anticodon of a tRNA is post-transcriptionally modified.","definition_xrefs":["GOC:hjd","ISBN:155581073X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00186":null,"SJAG_00235":null,"SJAG_00352":null,"SJAG_00358":null,"SJAG_00579":null,"SJAG_01024":null,"SJAG_01302":null,"SJAG_01418":null,"SJAG_01877":null,"SJAG_02099":null,"SJAG_02302":null,"SJAG_03616":null,"SJAG_03677":null,"SJAG_03896":null,"SJAG_03932":null,"SJAG_04113":null,"SJAG_04175":null,"SJAG_04189":null,"SJAG_04367":null,"SJAG_04380":null,"SJAG_04452":null,"SJAG_04704":null,"SJAG_04756":null,"SJAG_05023":null,"SJAG_05249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"tRNA wobble base modification","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002097","terms_by_termid":{"GO:0002098":null,"GO:0002100":null,"GO:0002101":null,"GO:0002127":null,"GO:0002143":null,"GO:0002926":null,"GO:0070899":null,"GO:1990799":null}}


id: MOD:00948
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-dephospho","termid":"MOD:00948"}


id: SO:0000534
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in germline configuration including at least one V-gene and one J-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_gene_cluster","termid":"SO:0000482"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_J_cluster","synonyms":[{"name":"V J cluster","type":"exact"},{"name":"V-J-CLUSTER","type":"exact"}],"termid":"SO:0000534"}


id: GO:0032018
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methylbutanol + NADP+ = 2-methylbutanal + NADPH + H+.","definition_xrefs":["GOC:mah","PMID:12210903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NADP+) activity","termid":"GO:0008106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"2-methylbutanal reductase (NADPH) activity","synonyms":[{"name":"2-methylbutanal reductase (NADP) activity","type":"exact"},{"name":"2-methylbutanol:NADP oxidoreductase activity","type":"exact"},{"name":"2-methylbutyraldehyde reductase (NADP) activity","type":"exact"}],"termid":"GO:0032018"}


id: PBO:0040697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branched chain keto acid dehydrogenase kinase","termid":"PBO:0040697"}


id: MONDO:0005164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal fibroblastic neoplasm affecting the soft tissue and bone.","definition_xrefs":["NCIT:C3043"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bone sarcoma","termid":"MONDO:0021054"},{"relation_name":"is_a","term_name":"fibroblastic neoplasm","termid":"MONDO:0006209"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"fibrosarcoma","secondary_identifiers":["MedDRA:10016632","NANDO:2200060","Orphanet:2030","EFO:0002087","DOID:3355","GARD:2327","MESH:D005354","MEDGEN:5178","ONCOTREE:FIBS","SCTID:443250000","UMLS:C0016057","HP:0100244","ICD9:171.9","ICDO:8810/3"],"synonyms":[{"name":"fibrocytic tumor","type":"broad"},{"name":"fibrocytic tumour","type":"broad"},{"name":"fibrosarcoma","type":"exact"},{"name":"fibrosarcoma (disease)","type":"exact"},{"name":"fibrosarcoma (excluding infantile fibrosarcoma)","type":"exact"},{"name":"fibrosarcoma - not infantile","type":"exact"},{"name":"fibrosarcoma of soft tissue","type":"exact"},{"name":"fibrosarcoma, malignant","type":"exact"},{"name":"fibrous tissue neoplasm","type":"exact"},{"name":"malignant fibromatous neoplasm","type":"exact"}],"termid":"MONDO:0005164","xrefs":{"Monarch":{"xref_id":"0005164"}}}


id: PBO:0058340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR4713 host gene","termid":"PBO:0058340"}


id: GO:0099074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Vesicle-mediated transport of cargo from the mitochondrion to the lysosome, mediated by a mitochondrion-derived vesicle.","definition_xrefs":["PMID:20619655","GOC:bc","GOC:pad","GOC:PARL-UCL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal transport","termid":"GO:0007041"},{"relation_name":"is_a","term_name":"mitochondrion-derived vesicle mediated transport","termid":"GO:0099075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"mitochondrion to lysosome vesicle-mediated transport","synonyms":[{"name":"mitochondrion to lysosome transport","type":"exact"}],"termid":"GO:0099074"}


id: GO:0043642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of novobiocin, a coumarin antibiotic produced by the bacterium Gyrasestreptomyces spheroides, that acts by inhibiting DNA gyrase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coumarin biosynthetic process","termid":"GO:0009805"},{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"antibiotic biosynthetic process","termid":"GO:0017000"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"novobiocin metabolic process","termid":"GO:0043641"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"novobiocin biosynthetic process","secondary_identifiers":["Wikipedia:Novobiocin"],"termid":"GO:0043642"}


id: MONDO:0006417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diffuse large B-cell lymphoma that arises from the small intestine.","definition_xrefs":["NCIT:C96055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system cancer","termid":"MONDO:0000621"},{"relation_name":"is_a","term_name":"small intestine lymphoma","termid":"MONDO:0001852"},{"relation_name":"is_a","term_name":"diffuse large B-cell lymphoma","termid":"MONDO:0018905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"small intestinal diffuse large B-cell lymphoma","secondary_identifiers":["MEDGEN:474155","UMLS:C3272522","EFO:1000534"],"synonyms":[{"name":"diffuse large B-cell lymphoma of small intestine","type":"exact"},{"name":"small intestinal diffuse large B-cell lymphoma","type":"exact"},{"name":"small intestine diffuse large B-cell lymphoma","type":"exact"}],"termid":"MONDO:0006417","xrefs":{"Monarch":{"xref_id":"0006417"}}}


id: PBO:0043827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage and polyadenylation specific factor 1","termid":"PBO:0043827"}


id: GO:0072594
data:
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id: PBO:0063465
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor receptor like","termid":"PBO:0063465"}


id: PBO:0017003
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR95","termid":"PBO:0017003"}


id: MONDO:0001263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An retinitis caused by infection with Histoplasma capsulatum.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Histoplasma capsulatum infectious disease","termid":"MONDO:0002099"},{"relation_name":"is_a","term_name":"retinitis","termid":"MONDO:0002708"},{"relation_name":"is_a","term_name":"endophthalmitis","termid":"MONDO:0016047"},{"relation_name":"is_a","term_name":"infectious disorder of the nervous system","termid":"MONDO:0020010"},{"relation_name":"is_a","term_name":"fungal infection of eye","termid":"MONDO:0020944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"histoplasmosis retinitis","secondary_identifiers":["SCTID:187058000","DOID:11316","MEDGEN:509240","UMLS:C0153278","ICD9:115.92"],"synonyms":[{"name":"Histoplasma capsulatum caused retinitis","type":"exact"},{"name":"Histoplasma capsulatum retinitis","type":"exact"},{"name":"histoplasmosis with retinitis","type":"exact"}],"termid":"MONDO:0001263","xrefs":{"Monarch":{"xref_id":"0001263"}}}


id: GO:0090287
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth factor stimulus.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to growth factor stimulus","termid":"GO:0090287"}


id: PBO:0087297
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Single-stranded DNA endonuclease (with Rad1p); cleaves single-stranded DNA during nucleotide excision repair and double-strand break repair; subunit of Nucleotide Excision Repair Factor 1 (NEF1); homolog of human ERCC1 protein","termid":"PBO:0087297"}


id: PBO:0039522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD33B pseudogene 3","termid":"PBO:0039522"}


id: GO:0046242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of o-xylene, (1,2-dimethylbenzene) a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete o-xylene biosynthetic process (obsolete GO:0046242)","synonyms":[{"name":"o-xylene anabolism","type":"exact"},{"name":"o-xylene biosynthesis","type":"exact"},{"name":"o-xylene biosynthetic process","type":"exact"},{"name":"o-xylene formation","type":"exact"},{"name":"o-xylene synthesis","type":"exact"},{"name":"ortho-xylene biosynthesis","type":"exact"},{"name":"ortho-xylene biosynthetic process","type":"exact"}],"termid":"GO:0046242"}


id: GO:0120325
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a NuRD complex.","definition_xrefs":["GOC:krc","GOC:lb","PMID:25150861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"NuRD complex binding","termid":"GO:0120325"}


id: PBO:0044058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin S","termid":"PBO:0044058"}


id: PBO:0049750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit zeta pseudogene 1","termid":"PBO:0049750"}


id: MOD:00522
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["RESID:AA0151#var","Unimod:154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"Hex3HexNAc1Pent1 N4-glycosylated asparagine","synonyms":[{"name":"Hex(3)HexNAc(1)Pent(1)","type":"related"},{"name":"Hex3HexNAc1Pent1","type":"related"}],"termid":"MOD:00522"}


id: PBO:0084500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein required for meiotic recombination; makes DNA double-strand breaks (DSB) during meiotic recombination, homolog pairing, and synaptonemal complex formation; role in meiotic DSB formation involves a topo-II-like transesterase mechanism; forms monotetrameric complex; covalently linked to DSBs through a 5'-phosphodiester bond between a catalytic tyrosine (Y135) and the DSB 5'- end; sequence similarity to a topo VI subunit from archaea, fission yeast rec12 and human SPO11","termid":"PBO:0084500"}


id: MONDO:0037858
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  {"annotated_genes":["SJAG_03553","SJAG_03290","SJAG_02007","SJAG_03701","SJAG_01417","SJAG_01147","SJAG_01164","SJAG_04499","SJAG_03222","SJAG_02397","SJAG_03641","SJAG_04016","SJAG_02306"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011614"},{"annotations":[86500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015003"},{"annotations":[86133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013762"},{"annotations":[84932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014576"},{"annotations":[84633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011582"},{"annotations":[85160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013675"},{"annotations":[85511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014132"},{"annotations":[84779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014611"},{"annotations":[84846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033282"},{"annotations":[85489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054785"},{"annotations":[85834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957382"},{"annotations":[84700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009529"},{"annotations":[85289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014803"}]},"cv_name":"mondo","definition":"A group of genetic disorders that result from the inability to produce or use an enzyme required to oxidize fatty acids, resulting in an inability to generate energy from fatty acid sources.","definition_xrefs":["NCIT:C117115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"}],"gene_count":13,"genes_by_uniquename":{"SJAG_01147":null,"SJAG_01164":null,"SJAG_01417":null,"SJAG_02007":null,"SJAG_02306":null,"SJAG_02397":null,"SJAG_03222":null,"SJAG_03290":null,"SJAG_03553":null,"SJAG_03641":null,"SJAG_03701":null,"SJAG_04016":null,"SJAG_04499":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"inherited fatty acid metabolism disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2100162","UMLS:C0268634","MEDGEN:468968","SCTID:39929009"],"synonyms":[{"name":"disorder of fat oxidation","type":"related"},{"name":"disorder of fatty acid metabolism","type":"exact"},{"name":"disorders of fatty-acid metabolism","type":"related"},{"name":"fatty acid metabolism disorder","type":"exact"},{"name":"inherited fatty acid metabolism disorder","type":"exact"}],"termid":"MONDO:0037858","terms_by_termid":{"MONDO:0009529":null,"MONDO:0011582":null,"MONDO:0011614":null,"MONDO:0013675":null,"MONDO:0013762":null,"MONDO:0014132":null,"MONDO:0014576":null,"MONDO:0014611":null,"MONDO:0014803":null,"MONDO:0015003":null,"MONDO:0033282":null,"MONDO:0054785":null,"MONDO:0957382":null},"xrefs":{"Monarch":{"xref_id":"0037858"}}}


id: PBO:0039543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 40","termid":"PBO:0039543"}


id: GO:0090715
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any immunological memory process that can contribute to the formation of immunological memory.","definition_xrefs":["GOC:add","PMID:26086132","PMID:26831526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunological memory process","termid":"GO:0090713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immunological memory formation process","termid":"GO:0090715"}


id: PBO:0081394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 233","termid":"PBO:0081394"}


id: MONDO:0015695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of combined immunodeficiency characterized by recurrent infections, autoimmunity, congenital myopathy and ectodermal dysplasia. It comprises two sub-types that are due to mutations in the ORAI1 and STIM1 genes: CID due to ORAI1 deficiency and CID due to STIM1 deficiency.","definition_xrefs":["Orphanet:169090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined immunodeficiency","termid":"MONDO:0015131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"combined immunodeficiency due to CRAC channel dysfunction","secondary_identifiers":["UMLS:C4303571","MEDGEN:929240","SCTID:717811007","icd11.foundation:1641826886","GARD:17048"],"synonyms":[{"name":"immune dysfunction due to T-cell inactivation due to calcium entry defect","type":"exact"}],"termid":"MONDO:0015695","xrefs":{"Monarch":{"xref_id":"0015695"}}}


id: MONDO:0001919
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"degeneration of macula and posterior pole","termid":"MONDO:0002175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cystoid macular retinal degeneration","secondary_identifiers":["UMLS:C0154850","DOID:14245","MEDGEN:472900","SCTID:14046000","ICD9:362.53"],"synonyms":[{"name":"cystoid macular degeneration of retina","type":"exact"}],"termid":"MONDO:0001919","xrefs":{"Monarch":{"xref_id":"0001919"}}}


id: PBO:0041517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 15 open reading frame 61","termid":"PBO:0041517"}


id: PBO:0044965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase 11","termid":"PBO:0044965"}


id: MONDO:1011826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysplastic gangliocytoma of the cerebellum, non-human animal","secondary_identifiers":["OMIA:002529"],"termid":"MONDO:1011826","xrefs":{"Monarch":{"xref_id":"1011826"}}}


id: MONDO:0004202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the adrenal medulla","direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal carcinoma","termid":"MONDO:0002814"},{"relation_name":"is_a","term_name":"adrenal medulla cancer","termid":"MONDO:0003606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adrenal medulla carcinoma","secondary_identifiers":["NCIT:C9276","DOID:7379"],"synonyms":[{"name":"adrenal medulla carcinoma","type":"exact"},{"name":"carcinoma of adrenal medulla","type":"exact"}],"termid":"MONDO:0004202","xrefs":{"Monarch":{"xref_id":"0004202"}}}


id: PBO:0036381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, human CXorf56 and C15orf40 ortholog","termid":"PBO:0036381"}


id: GO:0035817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process where sodium ions are taken up from the collecting ducts and proximal and distal loops of the nephron, which contributes to decreasing the amount of sodium that is excreted in urine per unit time.","definition_xrefs":["GOC:mtg_25march11","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal sodium ion absorption","termid":"GO:0070294"},{"relation_name":"part_of","term_name":"negative regulation of renal sodium excretion","termid":"GO:0035814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"renal sodium ion absorption involved in negative regulation of renal sodium excretion","termid":"GO:0035817"}


id: PBO:0049402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUCA1ANB-GUCA1A readthrough","termid":"PBO:0049402"}


id: GO:0050656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 3'-phosphoadenosine 5'-phosphosulfate (PAPS), a naturally occurring mixed anhydride. It is an intermediate in the formation of a variety of sulfo compounds in biological systems.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl ribonucleotide binding","termid":"GO:0032559"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"3'-phosphoadenosine 5'-phosphosulfate binding","synonyms":[{"name":"3'-phosphoadenosine 5'-phosphosulphate binding","type":"exact"},{"name":"3'-phosphoadenylyl-sulfate binding","type":"exact"},{"name":"PAPS binding","type":"exact"},{"name":"adenosine 3'-phosphate 5'-phosphosulfate binding","type":"exact"},{"name":"phosphoadenosine phosphosulfate binding","type":"exact"}],"termid":"GO:0050656"}


id: GO:0106149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-carbonyl nitrile + NADPH +O2=4-hydroxyindole-3- carbonyl nitrile + NADP+ + H20.","definition_xrefs":["RHEA:57864","PMID:26352477","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"indole-3-carbonyl nitrile 4-hydroxylase activity","secondary_identifiers":["EC:1.14.14.165"],"termid":"GO:0106149"}


id: PBO:0080397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS26C pseudogene 1","termid":"PBO:0080397"}


id: GO:0002924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of a humoral immune response mediated by circulating immunoglobulin.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immunoglobulin mediated immune response","termid":"GO:0002890"},{"relation_name":"is_a","term_name":"negative regulation of humoral immune response","termid":"GO:0002921"},{"relation_name":"is_a","term_name":"regulation of humoral immune response mediated by circulating immunoglobulin","termid":"GO:0002923"},{"relation_name":"negatively_regulates","term_name":"humoral immune response mediated by circulating immunoglobulin","termid":"GO:0002455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of humoral immune response mediated by circulating immunoglobulin","synonyms":[{"name":"down regulation of humoral immune response mediated by circulating immunoglobulin","type":"exact"},{"name":"down-regulation of humoral immune response mediated by circulating immunoglobulin","type":"exact"},{"name":"downregulation of humoral immune response mediated by circulating immunoglobulin","type":"exact"},{"name":"inhibition of humoral immune response mediated by circulating immunoglobulin","type":"narrow"}],"termid":"GO:0002924"}


id: MONDO:0004483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A thyroid gland adenoma composed of large cells with abundant granular eosinophilic cytoplasm and large nuclei with prominent nucleoli.","definition_xrefs":["NCIT:C6042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oncocytic adenoma","termid":"MONDO:0003424"},{"relation_name":"is_a","term_name":"follicular thyroid adenoma","termid":"MONDO:0005032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid gland oncocytic adenoma","secondary_identifiers":["ONCOTREE:OAT","DOID:8162","UMLS:C1336750","MEDGEN:237009"],"synonyms":[{"name":"Hurthle cell adenoma","type":"related"},{"name":"Hurthle cell adenoma of the thyroid","type":"related"},{"name":"Hurthle cell adenoma of the thyroid gland","type":"related"},{"name":"Hurthle cell adenoma of thyroid","type":"related"},{"name":"Hurthle cell adenoma of thyroid gland","type":"related"},{"name":"OAT","type":"broad"},{"name":"benign oncocytoma of the thyroid","type":"exact"},{"name":"benign oncocytoma of the thyroid gland","type":"related"},{"name":"benign oncocytoma of thyroid","type":"related"},{"name":"benign oncocytoma of thyroid gland","type":"related"},{"name":"benign thyroid gland oncocytoma","type":"related"},{"name":"benign thyroid oncocytoma","type":"related"},{"name":"follicular adenoma of the thyroid gland of the oxyphilic cell type","type":"related"},{"name":"follicular adenoma of the thyroid of the oxyphilic cell type","type":"related"},{"name":"follicular adenoma of thyroid gland of oxyphilic cell type","type":"related"},{"name":"follicular adenoma of thyroid of oxyphilic cell type","type":"related"},{"name":"oncocytic adenoma of the thyroid","type":"related"},{"name":"oncocytic adenoma of the thyroid gland","type":"related"},{"name":"oncocytic adenoma of thyroid","type":"related"},{"name":"oncocytic adenoma of thyroid gland","type":"related"},{"name":"thyroid Hurthle cell adenoma","type":"related"},{"name":"thyroid follicular adenoma of oxyphilic cell type","type":"related"},{"name":"thyroid follicular adenoma of the oxyphilic cell type","type":"related"},{"name":"thyroid gland Hurthle cell adenoma","type":"related"},{"name":"thyroid gland follicular adenoma of oxyphilic cell type","type":"related"},{"name":"thyroid gland follicular adenoma of the oxyphilic cell type","type":"related"},{"name":"thyroid gland oncocytic adenoma","type":"exact"},{"name":"thyroid oncocytic adenoma","type":"related"}],"termid":"MONDO:0004483","xrefs":{"Monarch":{"xref_id":"0004483"}}}


id: PBO:0066355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulocalbin 2","termid":"PBO:0066355"}


id: SO:0001936
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 36th residue (a lysine), from the start of the H3 histone protein is acetylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_3_acetylation_site","termid":"SO:0001973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K36_acetylation_site","synonyms":[{"name":"H3K36 acetylation site","type":"exact"},{"name":"H3K36ac","type":"exact"}],"termid":"SO:0001936"}


id: PBO:0048295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanidinoacetate N-methyltransferase pseudogene 2","termid":"PBO:0048295"}


id: GO:0033174
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The catalytic sector of the mitochondrial hydrogen-transporting ATP synthase; it comprises the catalytic core and central stalk, and is peripherally associated with the chloroplast thylakoid membrane when the entire ATP synthase is assembled. The chloroplast F0 domain contains three alpha, three beta, one gamma, one delta, and one epsilon subunits.","definition_xrefs":["GOC:pj","GOC:mah","PMID:11032839"],"gene_count":0,"genotype_count":0,"name":"obsolete chloroplast proton-transporting ATP synthase complex, catalytic core CF(1) (obsolete GO:0033174)","synonyms":[{"name":"chloroplast proton-transporting F-type ATPase complex, catalytic core CF(1)","type":"exact"}],"termid":"GO:0033174"}


id: GO:0051043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the proteolytic cleavage of transmembrane proteins and release of their ectodomain (extracellular domain).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteolysis","termid":"GO:0030162"},{"relation_name":"is_a","term_name":"regulation of protein catabolic process","termid":"GO:0042176"},{"relation_name":"regulates","term_name":"membrane protein ectodomain proteolysis","termid":"GO:0006509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"regulation of membrane protein ectodomain proteolysis","termid":"GO:0051043"}


id: MONDO:0031021
data:
  {"annotated_genes":["SJAG_00516"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86334],"is_not":false,"summary":null,"term":"MONDO:0031021"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 104","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1823956","DOID:0070390","OMIM:619970","UMLS:C5774183"],"synonyms":[{"name":"DEE104","type":"exact"},{"name":"developmental and epileptic encephalopathy 104","type":"exact"}],"termid":"MONDO:0031021","terms_by_termid":{"MONDO:0031021":null},"xrefs":{"Monarch":{"xref_id":"0031021"}}}


id: PBO:0060091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 38","termid":"PBO:0060091"}


id: GO:0000233
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A chromosome found in the cytoplasm during interphase.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic interphase chromosome (obsolete GO:0000233)","synonyms":[{"name":"cytoplasmic interphase chromosome","type":"exact"}],"termid":"GO:0000233"}


id: PBO:0004225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall organization protein (predicted)","termid":"PBO:0004225"}


id: PBO:0086320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to heat shock transcription factors; overexpression suppresses the pseudohyphal filamentation defect of a diploid mep1 mep2 homozygous null mutant; HMS2 has a paralog, SKN7, that arose from the whole genome duplication","termid":"PBO:0086320"}


id: GO:0097537
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A Y-shaped protein complex in the ciliary transition zone that connects the cilium axoneme to the ciliary necklace. Both protein sorting and protein gating occur at this point in the cilium allowing some, but not all proteins to enter the cilium.","definition_xrefs":["PMID:22653444","GOC:cilia","PMID:4554367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"ciliary transition zone","termid":"GO:0035869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Y-shaped link","synonyms":[{"name":"Y-link","type":"related"},{"name":"Y-link structure","type":"related"},{"name":"Y-shaped assemblage","type":"related"},{"name":"Y-shaped fiber","type":"related"},{"name":"Y-shaped fibre","type":"related"},{"name":"Y-shaped linker","type":"related"},{"name":"membrane-microtubule complex","type":"related"}],"termid":"GO:0097537"}


id: PBO:0067525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 668, pseudogene","termid":"PBO:0067525"}


id: GO:0009777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any metabolic process in which photosynthetic organisms use light energy to convert ADP to ATP without the concomitant reduction of dioxygen (O2) to water that occurs in phosphorylation.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylation","termid":"GO:0016310"},{"relation_name":"part_of","term_name":"photosynthesis, light reaction","termid":"GO:0019684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"photosynthetic phosphorylation","synonyms":[{"name":"photosynthetic ATP synthesis","type":"narrow"}],"termid":"GO:0009777"}


id: GO:0140624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The protein catabolic pathway which selectively extracts ER-resident membrane proteins exported to the Golgi and endosomes for degradation by cytosolic proteasomes. It begins with phosphorylation of the ER-resident membrane protein, which triggers export of the protein from the ER to the Golgi and endosomes, followed by polyubiquitination by the Dsc E3 ubiquitin ligase complex and extraction of the ubiquitinated target, and ends with proteasomal degradation.","definition_xrefs":["PMID:31368600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasomal protein catabolic process","termid":"GO:0010498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"EGAD pathway","termid":"GO:0140624"}


id: FYPO:0005561
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which stable microtubule bundles are longer than normal. Stable microtubule bundles, also called Q-MT bundles, are found in quiescent cells.","definition_xrefs":["PMID:26124291","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"},{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0002399","FYPO:0000054"],"is_obsolete":false,"name":"long stable microtubule bundle","synonyms":[{"name":"elongated stable microtubule bundle","type":"exact"},{"name":"increased stable microtubule bundle length","type":"exact"},{"name":"long Q-MT bundles","type":"exact"},{"name":"long quiescent cell MT bundle","type":"exact"},{"name":"long quiescent cell microtubule bundle","type":"exact"},{"name":"long stable microtubule array","type":"related"},{"name":"long static microtubule bundle","type":"exact"}],"termid":"FYPO:0005561"}


id: PBO:0056532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylcrotonyl-CoA carboxylase subunit 1","termid":"PBO:0056532"}


id: GO:0000249
data:
  {"annotated_genes":["SJAG_03249"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90977],"is_not":false,"summary":null,"term":"GO:0000249"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-dehydroepisterol + H+ + NADPH + O2 = ergosta-5,7,22,24(28)-tetraen-3beta-ol + 2 H2O + NADP+. This reaction is the introduction of a double bond between the C-22 and C-23 carbons of certain sterols. Also converts sitosterol and 24-epi-campesterol to stigmasterol and brassicasterol, respectively.","definition_xrefs":["EC:1.14.19.41"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol desaturase activity","termid":"GO:0070704"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"C-22 sterol desaturase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN3O-227"],"termid":"GO:0000249","terms_by_termid":{"GO:0000249":null}}


id: GO:1902871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of amacrine cell differentiation.","definition_xrefs":["GOC:TermGenie","GOC:mr","GO_REF:0000058","PMID:16872597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neuron differentiation","termid":"GO:0045666"},{"relation_name":"is_a","term_name":"regulation of amacrine cell differentiation","termid":"GO:1902869"},{"relation_name":"positively_regulates","term_name":"amacrine cell differentiation","termid":"GO:0035881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amacrine cell differentiation","synonyms":[{"name":"activation of amacrine cell differentiation","type":"narrow"},{"name":"activation of amacrine neuron differentiation","type":"narrow"},{"name":"positive regulation of amacrine neuron differentiation","type":"exact"},{"name":"up regulation of amacrine cell differentiation","type":"exact"},{"name":"up regulation of amacrine neuron differentiation","type":"exact"},{"name":"up-regulation of amacrine cell differentiation","type":"exact"},{"name":"up-regulation of amacrine neuron differentiation","type":"exact"},{"name":"upregulation of amacrine cell differentiation","type":"exact"},{"name":"upregulation of amacrine neuron differentiation","type":"exact"}],"termid":"GO:1902871"}


id: PBO:0057363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ag-1","termid":"PBO:0057363"}


id: PATO:0000628
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue the bearer's being changed in abnormal position.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"displaced","termid":"PATO:0002181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mislocalised","secondary_identifiers":["PATO:0000621"],"synonyms":[{"name":"ectopic","type":"exact"},{"name":"mislocalized","type":"exact"}],"termid":"PATO:0000628"}


id: GO:0090063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of microtubule nucleation. Microtubule nucleation is the 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates, some of which go on to support formation of a complete microtubule. Microtubule nucleation usually occurs from a specific site within a cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule nucleation","termid":"GO:0010968"},{"relation_name":"is_a","term_name":"positive regulation of microtubule polymerization","termid":"GO:0031116"},{"relation_name":"positively_regulates","term_name":"microtubule nucleation","termid":"GO:0007020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0044085","GO:0000226","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"positive regulation of microtubule nucleation","termid":"GO:0090063"}


id: FYPO:0005083
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at non-coding RNA (ncRNA) genes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:21151114","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to chromatin at ncRNA gene","synonyms":[{"name":"normal protein localisation to chromatin at ncRNA gene","type":"exact"},{"name":"normal protein localization to chromatin at ncRNA gene during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at ncRNA gene during vegetative growth","type":"exact"}],"termid":"FYPO:0005083"}


id: PBO:0061884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPA1 antisense RNA 1","termid":"PBO:0061884"}


id: GO:0004774
data:
  {"annotated_genes":["SJAG_01524","SJAG_03813"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89394,114470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004775"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: succinate + CoA + nucleotide triphosphate = nucleotide diphosphate + phosphate + succinyl-CoA.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01524":null,"SJAG_03813":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"succinate-CoA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0004774","terms_by_termid":{"GO:0004775":null}}


id: PBO:0076443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 13 pseudogene 2","termid":"PBO:0076443"}


id: GO:1900914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of octadecene biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of olefin biosynthetic process","termid":"GO:1900911"},{"relation_name":"is_a","term_name":"regulation of octadecene metabolic process","termid":"GO:1900917"},{"relation_name":"regulates","term_name":"octadecene biosynthetic process","termid":"GO:1900682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of octadecene biosynthetic process","synonyms":[{"name":"regulation of 1-octadecene biosynthetic process","type":"exact"},{"name":"regulation of octadecene anabolism","type":"exact"},{"name":"regulation of octadecene biosynthesis","type":"exact"},{"name":"regulation of octadecene formation","type":"exact"},{"name":"regulation of octadecene synthesis","type":"exact"}],"termid":"GO:1900914"}


id: PATO:0001207
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001207 absolute compatability (obsolete PATO:0001207)","termid":"PATO:0001207"}


id: PBO:0070355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 28","termid":"PBO:0070355"}


id: GO:0004035
data:
  {"annotated_genes":["SJAG_03108","SJAG_02853"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102937,103121],"is_not":false,"summary":null,"term":"GO:0004035"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a phosphate monoester + H2O = an alcohol + phosphate, with an alkaline pH optimum.","definition_xrefs":["EC:3.1.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02853":null,"SJAG_03108":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"alkaline phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8878787","MetaCyc:ALKAPHOSPHA-RXN"],"synonyms":[{"name":"alkaline phenyl phosphatase activity","type":"related"},{"name":"alkaline phosphohydrolase activity","type":"related"},{"name":"alkaline phosphomonoesterase activity","type":"related"},{"name":"glycerophosphatase activity","type":"broad"},{"name":"orthophosphoric-monoester phosphohydrolase (alkaline optimum)","type":"related"},{"name":"phosphate-monoester phosphohydrolase (alkaline optimum)","type":"related"},{"name":"phosphomonoesterase activity","type":"broad"}],"termid":"GO:0004035","terms_by_termid":{"GO:0004035":null}}


id: PBO:0046622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 3","termid":"PBO:0046622"}


id: MONDO:0000824
data:
  {"annotated_genes":["SJAG_02463","SJAG_01941","SJAG_04059","SJAG_04049","SJAG_03011","SJAG_00938"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85925,85924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014375"},{"annotations":[84973,84974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008964"},{"annotations":[84804,84805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009635"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"diarrheal disease","termid":"MONDO:0001673"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_01941":null,"SJAG_02463":null,"SJAG_03011":null,"SJAG_04049":null,"SJAG_04059":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"congenital diarrhea","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060774","OMIMPS:214700"],"synonyms":[{"name":"diarrhea, congenital","type":"exact"}],"termid":"MONDO:0000824","terms_by_termid":{"MONDO:0008964":null,"MONDO:0009635":null,"MONDO:0014375":null},"xrefs":{"Monarch":{"xref_id":"0000824"}}}


id: FYPO:0001121
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cell shape is altered, but cell size remains normal, in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal vegetative cell size","termid":"FYPO:0001124"},{"relation_name":"has_part","term_name":"abnormal cell shape","termid":"FYPO:0001126"},{"relation_name":"is_a","term_name":"normal vegetative cell size","termid":"FYPO:0001124"},{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000005","FYPO:0001320","FYPO:0000257","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"vegetative cell, abnormal cell shape, normal cell size","synonyms":[{"name":"abnormal cell shape, normal cell size during vegetative growth","type":"exact"},{"name":"lumpy","type":"related"},{"name":"vegetative cell, abnormal cell shape, normal cell length","type":"narrow"},{"name":"vegetative cell, abnormal cell shape, normal cell size during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001121"}


id: GO:0045938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the duration or quality of sleep, a readily reversible state of reduced awareness and metabolic activity that occurs periodically in many animals.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of circadian rhythm","termid":"GO:0042753"},{"relation_name":"is_a","term_name":"regulation of circadian sleep/wake cycle, sleep","termid":"GO:0045187"},{"relation_name":"is_a","term_name":"positive regulation of behavior","termid":"GO:0048520"},{"relation_name":"positively_regulates","term_name":"circadian sleep/wake cycle, sleep","termid":"GO:0050802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of circadian sleep/wake cycle, sleep","synonyms":[{"name":"activation of circadian sleep/wake cycle, sleep","type":"narrow"},{"name":"positive regulation of sleep","type":"exact"},{"name":"stimulation of circadian sleep/wake cycle, sleep","type":"narrow"},{"name":"up regulation of circadian sleep/wake cycle, sleep","type":"exact"},{"name":"up-regulation of circadian sleep/wake cycle, sleep","type":"exact"},{"name":"upregulation of circadian sleep/wake cycle, sleep","type":"exact"}],"termid":"GO:0045938"}


id: GO:0003001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cellular process that creates a physical entity or change in state, i.e. a signal, that originates in one cell and is used to transfer information to another cell. This process begins with the initial formation of the signal and ends with the mature form and placement of the signal.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete generation of a signal involved in cell-cell signaling (obsolete GO:0003001)","synonyms":[{"name":"formation of a signal","type":"broad"},{"name":"generation of a signal involved in cell-cell signaling","type":"exact"},{"name":"generation of a signal involved in cell-cell signalling","type":"exact"},{"name":"signal generation","type":"broad"}],"termid":"GO:0003001"}


id: GO:0050525
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cutin + H2O = cutin monomers.","definition_xrefs":["EC:3.1.1.74","MetaCyc:3.1.1.74-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"cutinase activity","synonyms":[{"name":"cutin hydrolase activity","type":"related"}],"termid":"GO:0050525"}


id: PBO:0113239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear decapping endonuclease; targets mRNAs with unmethylated 7-methylguanosine cap structures and 5'-triphosphates; binds to and stabilizes the exoribonuclease Rat1p; required for pre-rRNA processing; involved in an early step of decapping non-canonical nicotinamide adenine dinucleotide (NAD) capped nuclear mRNAs (NAD-RNAs), part of ncRNA surveillance; relocalizes to the cytosol in response to hypoxia; homologous to human DOM3Z","termid":"PBO:0113239"}


id: GO:0034646
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A lipid monolayer that surrounds and encloses an organelle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"intracellular organelle","termid":"GO:0043229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"organelle-enclosing lipid monolayer","termid":"GO:0034646"}


id: GO:0010442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation and organization of the polarized cell that is capable of turgor driven movement.","definition_xrefs":["GOC:tb","GOC:expert_db"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"part_of","term_name":"guard cell development","termid":"GO:0010441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"guard cell morphogenesis","synonyms":[{"name":"guard cell morphogenesis during differentiation","type":"exact"}],"termid":"GO:0010442"}


id: PBO:0027155
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vacuolar_glutamine_level","termid":"PBO:0027155"}


id: GO:2000115
data:
  {"annotated_genes":["SJAG_00845"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061361"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maintenance of bipolar cell polarity regulating in cell shape.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:2000100"},{"relation_name":"regulates","term_name":"maintenance of bipolar cell polarity regulating cell shape","termid":"GO:0061305"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"regulation of maintenance of bipolar cell polarity regulating cell shape","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000115","terms_by_termid":{"GO:0061361":null}}


id: PBO:0063608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylformylglycinamidine synthase","termid":"PBO:0063608"}


id: PBO:0027654
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cut_during_cellular_response_to_ionizing_radiation_during_mitotic_S_phase","termid":"PBO:0027654"}


id: PBO:0061293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal PAS domain protein 4","termid":"PBO:0061293"}


id: GO:1904036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of epithelial cell apoptotic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:19137015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"regulation of epithelial cell apoptotic process","termid":"GO:1904035"},{"relation_name":"negatively_regulates","term_name":"epithelial cell apoptotic process","termid":"GO:1904019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epithelial cell apoptotic process","synonyms":[{"name":"down regulation of epithelial cell apoptosis","type":"narrow"},{"name":"down regulation of epithelial cell apoptotic process","type":"exact"},{"name":"down regulation of epitheliocyte apoptosis","type":"narrow"},{"name":"down regulation of epitheliocyte apoptotic process","type":"exact"},{"name":"down-regulation of epithelial cell apoptosis","type":"narrow"},{"name":"down-regulation of epithelial cell apoptotic process","type":"exact"},{"name":"down-regulation of epitheliocyte apoptosis","type":"narrow"},{"name":"down-regulation of epitheliocyte apoptotic process","type":"exact"},{"name":"downregulation of epithelial cell apoptosis","type":"narrow"},{"name":"downregulation of epithelial cell apoptotic process","type":"exact"},{"name":"downregulation of epitheliocyte apoptosis","type":"narrow"},{"name":"downregulation of epitheliocyte apoptotic process","type":"exact"},{"name":"inhibition of epithelial cell apoptosis","type":"narrow"},{"name":"inhibition of epithelial cell apoptotic process","type":"narrow"},{"name":"inhibition of epitheliocyte apoptosis","type":"narrow"},{"name":"inhibition of epitheliocyte apoptotic process","type":"narrow"},{"name":"negative regulation of epithelial cell apoptosis","type":"narrow"},{"name":"negative regulation of epitheliocyte apoptosis","type":"narrow"},{"name":"negative regulation of epitheliocyte apoptotic process","type":"exact"}],"termid":"GO:1904036"}


id: PBO:0073366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family I member 1","termid":"PBO:0073366"}


id: GO:0003180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure of the aortic valve is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve morphogenesis","termid":"GO:0003179"},{"relation_name":"part_of","term_name":"aortic valve development","termid":"GO:0003176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aortic valve morphogenesis","termid":"GO:0003180"}


id: PBO:0062299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 10","termid":"PBO:0062299"}


id: MONDO:0019136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any infection due to a fungus of the Zygomycota phylum. The disease typically involves the rhino-facial-cranial area, lungs, gastrointestinal tract, skin, or less commonly other organ systems. The infecting fungi have a predilection for invading vessels of the arterial system, causing embolization and subsequent necrosis of surrounding tissue.","definition_xrefs":["NCIT:C77212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opportunistic mycosis","termid":"MONDO:0002312"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zygomycosis","secondary_identifiers":["ICD9:117.7","UMLS:C0043541","GARD:10224","MedDRA:10061418","SCTID:59277005","NORD:1946","MEDGEN:12207","MESH:D020096","EFO:0007380","DOID:8485","ICD10CM:B46","icd11.foundation:1676389165","MedDRA:10028098","MESH:D009091","SCTID:76627001","Orphanet:73263"],"synonyms":[{"name":"Mucormycosis","type":"exact"},{"name":"Zygomycota infectious disease","type":"exact"},{"name":"mucormycosis","type":"exact"}],"termid":"MONDO:0019136","xrefs":{"Monarch":{"xref_id":"0019136"}}}


id: PBO:0065941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RACK1 pseudogene 1","termid":"PBO:0065941"}


id: GO:0000259
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose (a deoxyribonucleotide) within a cell.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular nucleoside transmembrane transporter activity (obsolete GO:0000259)","synonyms":[{"name":"intracellular nucleoside transmembrane transporter activity","type":"exact"}],"termid":"GO:0000259"}


id: PBO:0083014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box RNA helicase; involved in the second catalytic step of splicing and in exon ligation; exhibits ATP-dependent RNA unwinding activity; mediates the release of Yju2p and Cwc25p in the second step; in the absence of ATP, stabilizes the binding of Cwc25p to the spliceosome in the first catalytic step; missense mutation in human ortholog DHX38 associated with early-onset retinitis pigmentosa","termid":"PBO:0083014"}


id: GO:0002829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of a type 2 immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type 2 immune response","termid":"GO:0002828"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"type 2 immune response","termid":"GO:0042092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of type 2 immune response","synonyms":[{"name":"down regulation of type 2 immune response","type":"exact"},{"name":"down-regulation of type 2 immune response","type":"exact"},{"name":"downregulation of type 2 immune response","type":"exact"},{"name":"inhibition of type 2 immune response","type":"narrow"},{"name":"negative regulation of T-helper 2 type immune response","type":"narrow"},{"name":"negative regulation of Th2 immune response","type":"narrow"}],"termid":"GO:0002829"}


id: GO:0010770
data:
  {"annotated_genes":["SJAG_02392","SJAG_03581","SJAG_00514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89340,95334,94063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of cell morphogenesis contributing to cell differentiation. Cell morphogenesis involved in differentiation is the change in form (cell shape and size) that occurs when relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of cell morphogenesis","termid":"GO:0022604"},{"relation_name":"positively_regulates","term_name":"cell morphogenesis","termid":"GO:0000902"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_02392":null,"SJAG_03581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell morphogenesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010770","terms_by_termid":{"GO:0051519":null}}


id: PBO:0054427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1823","termid":"PBO:0054427"}


id: PBO:0044015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 delta","termid":"PBO:0044015"}


id: MOD:01610
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to L-threonine methyl ester.","definition_xrefs":["RESID:AA0507","PubMed:19745839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-carboxyl methylated residue","termid":"MOD:01689"},{"relation_name":"is_a","term_name":"O-methylated threonine","termid":"MOD:01803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"L-threonine methyl ester","synonyms":[{"name":"L-threonine methyl ester","type":"exact"},{"name":"MOD_RES Threonine methyl ester","type":"exact"},{"name":"methyl (2S,3R)-2-amino-3-hydroxybutanoate","type":"exact"},{"name":"methyl L-threoninate","type":"exact"}],"termid":"MOD:01610"}


id: MONDO:0017312
data:
  {"annotated_genes":["SJAG_00103","SJAG_04738"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013972"},{"annotations":[85496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014126"}]},"cv_name":"mondo","definition":"Perrault syndrome (PS) is characterized by the association of ovarian dysgenesis in females with sensorineural hearing impairment. In more recent PS reports, some authors have described neurologic abnormalities, notably progressive cerebellar ataxia and intellectual deficit.","definition_xrefs":["Orphanet:2855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00103":null,"SJAG_04738":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047","MONDO:0006025","MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"Perrault syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:151934","SCTID:93466004","NORD:2031","DOID:0050857","OMIMPS:233400","UMLS:C0685838","GARD:2542","icd11.foundation:256968598"],"synonyms":[{"name":"Perrault syndrome","type":"exact"},{"name":"XX gonodal dysgenesis-deafness syndrome","type":"exact"},{"name":"gonadal dysgenesis, XX type, with deafness","type":"related"}],"termid":"MONDO:0017312","terms_by_termid":{"MONDO:0013972":null,"MONDO:0014126":null},"xrefs":{"Monarch":{"xref_id":"0017312"}}}


id: MONDO:0000656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete alpha chain disease (obsolete MONDO:0000656)","termid":"MONDO:0000656","xrefs":{"Monarch":{"xref_id":"0000656"}}}


id: FYPO:0009066
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of amorolfine than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0002682","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"resistance to amorolfine","synonyms":[{"name":"resistance to amorolfine during mitotic cell cycle","type":"related"},{"name":"resistance to amorolfine during vegetative growth","type":"exact"},{"name":"resistant to amorolfine","type":"exact"}],"termid":"FYPO:0009066"}


id: MONDO:0030506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46 XX gonadal dysgenesis","termid":"MONDO:0009299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"ovarian dysgenesis 9","secondary_identifiers":["MEDGEN:1794256","UMLS:C5562046","OMIM:619665"],"synonyms":[{"name":"ODG9","type":"exact"}],"termid":"MONDO:0030506","xrefs":{"Monarch":{"xref_id":"0030506"}}}


id: PBO:0038817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 21","termid":"PBO:0038817"}


id: PBO:0073269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 13","termid":"PBO:0073269"}


id: PBO:0026953
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_equatorial_microtubule_organizing_center_during_vegetative_growth","termid":"PBO:0026953"}


id: PBO:0001938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch repeat protein","termid":"PBO:0001938"}


id: PBO:0091494
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hal3 N-term functionally complements S. cerevisiae HAL3","termid":"PBO:0091494"}


id: PBO:0056989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR31 host gene","termid":"PBO:0056989"}


id: PBO:0046811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F11 receptor","termid":"PBO:0046811"}


id: PBO:0072438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 2","termid":"PBO:0072438"}


id: PBO:0058413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4782","termid":"PBO:0058413"}


id: PBO:0056474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine adenosyltransferase 2 non-catalytic beta subunit","termid":"PBO:0056474"}


id: MONDO:0001577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection with the respiratory syncytial virus, an RNA virus of the genus Pneumovirus, in the family Paramyxoviridae, which is characterized by the formation of syncytia in tissue culture. It causes minor respiratory infection with rhinitis and cough in adults, but is capable of causing severe bronchitis and bronchopneumonia in young children.","definition_xrefs":["NCIT:C3354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mononegavirales infectious disease","termid":"MONDO:0005856"},{"relation_name":"is_a","term_name":"viral respiratory tract infection","termid":"MONDO:0024352"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"respiratory syncytial virus infectious disease","secondary_identifiers":["SCTID:55735004","MEDGEN:48424","UMLS:C0035235","DOID:1273","EFO:1001413","MESH:D018357"],"synonyms":[{"name":"Human respiratory syncytial virus infection","type":"exact"},{"name":"infections, Human respiratory syncytial virus","type":"related"},{"name":"respiratory syncytial virus infection","type":"exact"}],"termid":"MONDO:0001577","xrefs":{"Monarch":{"xref_id":"0001577"}}}


id: PBO:0074324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small ArfGAP2","termid":"PBO:0074324"}


id: MONDO:0004892
data:
  {"annotated_genes":["SJAG_03233","SJAG_04553"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032941"},{"annotations":[85532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012154"}]},"cv_name":"mondo","definition":"A defect in the focusing of light on the retina as in astigmatism, myopia, or hyperopia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03233":null,"SJAG_04553":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"refractive error","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:39021009","DOID:9835","MESH:D012030","UMLS:C0034951","MEDGEN:20508"],"termid":"MONDO:0004892","terms_by_termid":{"MONDO:0012154":null,"MONDO:0032941":null},"xrefs":{"Monarch":{"xref_id":"0004892"}}}


id: GO:0000155
data:
  {"annotated_genes":["SJAG_00331","SJAG_02183","SJAG_01587"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90643,94744,117782],"is_not":false,"summary":null,"term":"GO:0000155"}]},"cv_name":"molecular_function","definition":"Catalysis of the phosphorylation of a histidine residue in response to detection of an extracellular signal such as a chemical ligand or change in environment, to initiate a change in cell state or activity. The two-component sensor is a histidine kinase that autophosphorylates a histidine residue in its active site. The phosphate is then transferred to an aspartate residue in a downstream response regulator, to trigger a response.","definition_xrefs":["GOC:mcc","PMID:31386843","GOC:bf","PMID:9191038","PMID:10966457","PMID:20223701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein histidine kinase activity","termid":"GO:0004673"},{"relation_name":"is_a","term_name":"molecular sensor activity","termid":"GO:0140299"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00331":null,"SJAG_01587":null,"SJAG_02183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0140299","GO:0004672","GO:0098772","GO:0003824","GO:0140096","GO:0016301"],"is_obsolete":false,"name":"phosphorelay sensor kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"two-component sensor activity","type":"narrow"},{"name":"two-component sensor molecule","type":"narrow"},{"name":"two-component system sensor activity","type":"narrow"}],"termid":"GO:0000155","terms_by_termid":{"GO:0000155":null}}


id: GO:0009361
data:
  {"annotated_genes":["SJAG_01524"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89391],"is_not":false,"summary":null,"term":"GO:0009361"}]},"cv_name":"cellular_component","definition":"A heterodimeric enzyme complex, composed of an alpha and beta chain, most usually found in (but not limited to) bacteria. Functions in the TCA cycle, hydrolyzing succinyl-CoA into succinate and CoA, thereby forming ATP.","definition_xrefs":["GOC:jl","PMID:9874242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate-CoA ligase complex","termid":"GO:0042709"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01524":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"succinate-CoA ligase complex (ADP-forming)","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"succinyl-CoA synthetase, ADP-forming","type":"exact"}],"termid":"GO:0009361","terms_by_termid":{"GO:0009361":null}}


id: MONDO:0016672
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, hemoglobinopathy characterized by generally mild clinical phenotype, high fetal hemoglobin levels and mild microcytosis and hypochromia. In some cases, acute sickle cell disease manifestations were reported, namely acute chest syndrome and acute pain crisis. The genotype is characterized by the combination of an HbS and HbF allele; symptoms depend on the degree of HbF:HbS expressivity with patients with more than 35% pancellular HbF expression being asymptomatic. Symptomatic patients have heterocellular expression of HbF.","definition_xrefs":["Orphanet:251380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inherited hemoglobinopathy","termid":"MONDO:0019050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hereditary persistence of fetal hemoglobin-sickle cell disease syndrome","secondary_identifiers":["MEDGEN:1679967","GARD:18648","HGNC:3627","UMLS:C5190890","HGNC:5153"],"synonyms":[{"name":"HPFH-sickle cell disease syndrome","type":"exact"}],"termid":"MONDO:0016672","xrefs":{"Monarch":{"xref_id":"0016672"}}}


id: PBO:0066887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 187","termid":"PBO:0066887"}


id: GO:1905123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glucosylceramidase activity.","definition_xrefs":["GOC:TermGenie","GOC:bf","GOC:PARL","GO_REF:0000059","PMID:24334770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glucosylceramidase activity","synonyms":[{"name":"regulation of D-glucosyl-N-acylsphingosine glucohydrolase activity","type":"exact"},{"name":"regulation of GCase activity","type":"exact"},{"name":"regulation of GlcCer-beta-glucosidase activity","type":"exact"},{"name":"regulation of acid beta-glucosidase activity","type":"exact"},{"name":"regulation of beta-D-glucocerebrosidase activity","type":"exact"},{"name":"regulation of beta-glucocerebrosidase activity","type":"exact"},{"name":"regulation of beta-glucosylceramidase activity","type":"exact"},{"name":"regulation of ceramide glucosidase activity","type":"exact"},{"name":"regulation of glucocerebrosidase activity","type":"exact"},{"name":"regulation of glucosphingosine glucosylhydrolase activity","type":"exact"},{"name":"regulation of glucosylcerebrosidase activity","type":"exact"},{"name":"regulation of glucosylsphingosine beta-D-glucosidase activity","type":"exact"},{"name":"regulation of glucosylsphingosine beta-glucosidase activity","type":"exact"},{"name":"regulation of psychosine hydrolase activity","type":"exact"}],"termid":"GO:1905123"}


id: MONDO:0031052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 106","secondary_identifiers":["UMLS:C5774212","OMIM:620028","DOID:0070392","MEDGEN:1823985"],"synonyms":[{"name":"DEE106","type":"exact"},{"name":"developmental and epileptic encephalopathy 106","type":"exact"}],"termid":"MONDO:0031052","xrefs":{"Monarch":{"xref_id":"0031052"}}}


id: GO:0102698
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (+)-5-epi-aristolochene + diphosphoric acid.","definition_xrefs":["EC:4.2.3.61","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"5-epi-aristolochene synthase activity","secondary_identifiers":["MetaCyc:RXN-4781","RHEA:28635"],"termid":"GO:0102698"}


id: MONDO:1010191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deficiency of uridine monophosphate synthase that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deficiency of uridine monophosphate synthase, non-human animal","secondary_identifiers":["OMIA:000262"],"termid":"MONDO:1010191","xrefs":{"Monarch":{"xref_id":"1010191"}}}


id: PBO:0049641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 44","termid":"PBO:0049641"}


id: GO:1905627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of serotonin biosynthetic process.","definition_xrefs":["GOC:pad","PMID:25642596","GOC:TermGenie","GOC:PARL","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"regulates","term_name":"serotonin biosynthetic process","termid":"GO:0042427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of serotonin biosynthetic process","synonyms":[{"name":"regulation of serotonin anabolism","type":"exact"},{"name":"regulation of serotonin biosynthesis","type":"exact"},{"name":"regulation of serotonin formation","type":"exact"},{"name":"regulation of serotonin synthesis","type":"exact"}],"termid":"GO:1905627"}


id: GO:0050833
data:
  {"annotated_genes":["SJAG_01924","SJAG_04593"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93880,113656],"is_not":false,"summary":null,"term":"GO:0050833"}]},"cv_name":"molecular_function","definition":"Enables the transfer of pyruvate, 2-oxopropanoate, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01924":null,"SJAG_04593":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"pyruvate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-372342"],"synonyms":[{"name":"monocarboxylate (lactate, pyruvate, mevalonate) uptake/efflux porter activity","type":"related"}],"termid":"GO:0050833","terms_by_termid":{"GO:0050833":null}}


id: PBO:0061381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 41","termid":"PBO:0061381"}


id: PATO:0001534
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color pattern inhering in a bearer by virtue of bearer's having 3 or more hues or degrees of saturations.","definition_xrefs":["merriam-webster.:merriam-webster."],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-colored","termid":"PATO:0001533"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"motley","termid":"PATO:0001534"}


id: GO:0016551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The insertion into or deletion from an RNA molecule of nucleotide residues not encoded in DNA; takes place after transcription.","definition_xrefs":["PMID:11092837"],"gene_count":0,"genotype_count":0,"name":"obsolete posttranscriptional insertion or deletion editing (obsolete GO:0016551)","synonyms":[{"name":"posttranscriptional insertion or deletion editing","type":"exact"},{"name":"posttranscriptional insertion/deletion editing","type":"exact"}],"termid":"GO:0016551"}


id: MONDO:1011592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Portosystemic shunt that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"portosystemic shunt, non-human animal","termid":"MONDO:1011409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"portosystemic shunt, horse","secondary_identifiers":["OMIA:000817-9796"],"termid":"MONDO:1011592","xrefs":{"Monarch":{"xref_id":"1011592"}}}


id: GO:0043987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an phosphate group to a serine residue at position 10 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-S10 phosphorylation (obsolete GO:0043987)","synonyms":[{"name":"histone H3 phosphorylation at S10","type":"exact"},{"name":"histone H3S10 phosphorylation","type":"exact"}],"termid":"GO:0043987"}


id: GO:0042584
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a chromaffin granule, a specialized secretory vesicle found in the cells of adrenal glands and various other organs, which is concerned with the synthesis, storage, metabolism, and secretion of epinephrine and norepinephrine.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule membrane","termid":"GO:0030667"},{"relation_name":"part_of","term_name":"chromaffin granule","termid":"GO:0042583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chromaffin granule membrane","termid":"GO:0042584"}


id: GO:0019420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reduction of sulfate to hydrogen sulfide, which acts as a terminal electron acceptor. Sulfate is activated to adenosine-phosphosulfate (APS) which is then reduced to sulfite, which is in turn reduced to hydrogen sulfide.","definition_xrefs":["PMID:25400653","PMID:26680199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfate assimilation","termid":"GO:0000103"},{"relation_name":"is_a","term_name":"anaerobic respiration","termid":"GO:0009061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"dissimilatory sulfate reduction","secondary_identifiers":["MetaCyc:DISSULFRED-PWY","Wikipedia:Sulfate-reducing_microorganism"],"synonyms":[{"name":"dissimilatory sulphate reduction","type":"exact"}],"termid":"GO:0019420"}


id: PR:Q9Y7L9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC685.08 gene.","definition_xrefs":["UniProtKB:Q9Y7L9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C685.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC685.08","synonyms":[{"name":"Spom972h-SPBC685.08","type":"exact"}],"termid":"PR:Q9Y7L9"}


id: PBO:0034723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lid2 complex PHD finger subunit Snt2","termid":"PBO:0034723"}


id: MONDO:0005945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A granulomatous disease caused by klebsiella rhinoscleromatis infection. Despite its name, this disease is not limited to the nose and nasopharynx but may affect any part of the respiratory tract, sometimes with extension to the lip and the skin.","definition_xrefs":["MESH:D012226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"Klebsiella infectious disease","termid":"MONDO:0030603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhinoscleroma","secondary_identifiers":["DOID:11336","MEDGEN:20569","SCTID:72409005","UMLS:C0035468","icd11.foundation:1053615368","ICD9:040.1","EFO:0007470"],"termid":"MONDO:0005945","xrefs":{"Monarch":{"xref_id":"0005945"}}}


id: GO:0006483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The hydroxylation of peptidyl-aspartic acid or asparagine.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-aspartic acid/asparagine hydroxylation (obsolete GO:0006483)","synonyms":[{"name":"aspartic acid/asparagine hydroxylation","type":"exact"},{"name":"peptidyl-aspartic acid/asparagine hydroxylation","type":"exact"}],"termid":"GO:0006483"}


id: PBO:0073936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 17 member 8","termid":"PBO:0073936"}


id: FYPO:0001752
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of homocitrate synthase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal homocitrate synthase activity","termid":"FYPO:0001750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"decreased homocitrate synthase activity","synonyms":[{"name":"reduced homocitrate synthase activity","type":"exact"}],"termid":"FYPO:0001752"}


id: PBO:0075450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 3","termid":"PBO:0075450"}


id: PBO:0070904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 12","termid":"PBO:0070904"}


id: PBO:0000451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial GTPase related protein (prediected)","termid":"PBO:0000451"}


id: GO:0032589
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a neuron projection.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"is_a","term_name":"leading edge membrane","termid":"GO:0031256"},{"relation_name":"part_of","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"neuron projection membrane","termid":"GO:0032589"}


id: GO:0050598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADPH + O2 + taxa-4(20),11-dien-5alpha-ol = H2O + NADP+ + taxa-4(20),11-dien-5alpha,13alpha-diol.","definition_xrefs":["EC:1.14.14.106","RHEA:18949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"taxane 13-alpha-hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R06308","MetaCyc:1.14.13.77-RXN"],"synonyms":[{"name":"taxa-4(20),11-dien-5alpha-ol,NADPH:oxygen oxidoreductase (13alpha-hydroxylating)","type":"related"},{"name":"taxane 13a-hydroxylase activity","type":"exact"},{"name":"taxane 13alpha-hydroxylase activity","type":"related"}],"termid":"GO:0050598"}


id: PBO:0061664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 42","termid":"PBO:0061664"}


id: PBO:0030631
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_sucrose_carbon_source","termid":"PBO:0030631"}


id: PBO:0086458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative metallo-dependent hydrolase superfamily protein; similar to AMP deaminases but lacks key catalytic residues and does not rescue purine nucleotide metabolic defect of quadruple aah1 ade8 amd1 his1 mutant; null mutant exhibits longer telomeres, altered Ty mobility, decreased resistance to rapamycin and wortmannin; induced in response to hydrostatic pressure; not an essential gene; YBR284W has a paralog, YJL070C, that arose from the whole genome duplication","termid":"PBO:0086458"}


id: GO:0033124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of GTP, guanosine triphosphate.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of GTP catabolic process (obsolete GO:0033124)","synonyms":[{"name":"regulation of GTP breakdown","type":"exact"},{"name":"regulation of GTP catabolism","type":"exact"},{"name":"regulation of GTP degradation","type":"exact"}],"termid":"GO:0033124"}


id: GO:0046083
data:
  {"annotated_genes":["SJAG_03140","SJAG_01661","SJAG_02364","SJAG_01859","SJAG_01814"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97297],"is_not":false,"summary":null,"term":"GO:0046083"},{"annotations":[116853,109742,109856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046084"},{"annotations":[93017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006168"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving adenine, 6-aminopurine, one of the five main bases found in nucleic acids and a component of numerous important derivatives of its corresponding ribonucleoside, adenosine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase metabolic process","termid":"GO:0006144"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_02364":null,"SJAG_03140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"adenine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adenine metabolism","type":"exact"}],"termid":"GO:0046083","terms_by_termid":{"GO:0006168":null,"GO:0046083":null,"GO:0046084":null}}


id: PBO:0029261
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_transmembrane_transport_gene_mRNA_during_vegetative_growth","termid":"PBO:0029261"}


id: PBO:0052067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine acetyltransferase 7","termid":"PBO:0052067"}


id: PBO:0054110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1475","termid":"PBO:0054110"}


id: SO:1000049
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Any change in mature, spliced and processed, RNA that results from a change in the corresponding DNA sequence.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000049 sequence_variation_affecting_transcript (obsolete SO:1000049)","synonyms":[{"name":"mutation affecting transcript","type":"exact"},{"name":"mutation causing partially characterised change in transcript","type":"related"},{"name":"mutation causing uncharacterised change in transcript","type":"related"},{"name":"sequence variant causing partially characterised change in transcript","type":"exact"},{"name":"sequence variant causing uncharacterised change in transcript","type":"exact"},{"name":"sequence variation affecting transcript","type":"exact"},{"name":"sequence_variant_causing_partially_characterised_change_in_transcript","type":"exact"},{"name":"sequence_variant_causing_uncharacterised_change_in_transcript","type":"exact"}],"termid":"SO:1000049"}


id: GO:2001284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of BMP secretion.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"regulation of signaling","termid":"GO:0023051"},{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"regulates","term_name":"BMP secretion","termid":"GO:0038055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of BMP secretion","synonyms":[{"name":"regulation of BMP protein secretion","type":"exact"},{"name":"regulation of bone morphogenetic protein secretion","type":"exact"}],"termid":"GO:2001284"}


id: PR:O13963
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A diphosphomevalonate decarboxylase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01270","PANTHER:PTHR10977:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphosphomevalonate decarboxylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.03","secondary_identifiers":["UniProtKB:O13963"],"synonyms":[{"name":"MDDase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MVD","type":"exact"},{"name":"mevalonate pyrophosphate decarboxylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mevalonate-5-diphosphate decarboxylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13963"}


id: PBO:0090875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ferric-chelate reductase","termid":"PBO:0090875"}


id: PBO:0078850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily C member 5","termid":"PBO:0078850"}


id: MONDO:0012311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondylomegaepiphyseal dysplasia with upper limb mesomelia, punctate calcifications, and deafness","secondary_identifiers":["MESH:C566507","OMIM:609616","UMLS:C1865022","MEDGEN:355893"],"synonyms":[{"name":"spondylomegaepiphyseal dysplasia with upper limb mesomelia, punctate calcifications, and deafness","type":"exact"}],"termid":"MONDO:0012311","xrefs":{"Monarch":{"xref_id":"0012311"}}}


id: MONDO:0044223
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete radin blood group antigen (obsolete MONDO:0044223)","secondary_identifiers":["OMIM:111620"],"synonyms":[{"name":"RADIN blood group antigen","type":"related"},{"name":"RD","type":"related"},{"name":"blood Group--Radin antigen","type":"related"},{"name":"blood group, Radin","type":"exact"}],"termid":"MONDO:0044223","xrefs":{"Monarch":{"xref_id":"0044223"}}}


id: PBO:0067675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 860, pseudogene","termid":"PBO:0067675"}


id: MONDO:0022409
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nephropathy-associated ciliopathy (obsolete MONDO:0022409)","secondary_identifiers":["Orphanet:156162"],"termid":"MONDO:0022409","xrefs":{"Monarch":{"xref_id":"0022409"}}}


id: MONDO:0021126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An characteristic of a disease that varies depending on whether the disease appears as an isolated feature or whether the disease is a syndrome consisting of multiple features.","direct_ancestors":[{"relation_name":"is_a","term_name":"disease characteristic","termid":"MONDO:0021125"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndromic or isolated","termid":"MONDO:0021126","xrefs":{"Monarch":{"xref_id":"0021126"}}}


id: GO:0051650
data:
  {"annotated_genes":["SJAG_04391","SJAG_04960","SJAG_03005","SJAG_03864","SJAG_02166","SJAG_03011","SJAG_01925","SJAG_02320","SJAG_03357","SJAG_03268","SJAG_03938","SJAG_04044"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92709,117243],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048205"},{"annotations":[117933],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099022"},{"annotations":[113652,113360,101421,90229,99050,117228,118338,88100],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090522"},{"annotations":[115681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030050"}]},"cv_name":"biological_process","definition":"The directed movement of a vesicle to a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle localization","termid":"GO:0051648"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"establishment of organelle localization","termid":"GO:0051656"}],"gene_count":12,"genes_by_uniquename":{"SJAG_01925":null,"SJAG_02166":null,"SJAG_02320":null,"SJAG_03005":null,"SJAG_03011":null,"SJAG_03268":null,"SJAG_03357":null,"SJAG_03864":null,"SJAG_03938":null,"SJAG_04044":null,"SJAG_04391":null,"SJAG_04960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of vesicle localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment of vesicle localisation","type":"exact"}],"termid":"GO:0051650","terms_by_termid":{"GO:0030050":null,"GO:0048205":null,"GO:0090522":null,"GO:0099022":null}}


id: MONDO:0012945
data:
  {"annotated_genes":["SJAG_02289"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86264],"is_not":false,"summary":null,"term":"MONDO:0012945"}]},"cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis in which the cause of the disease is a mutation in the FIG4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 11","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C2675491","MESH:C567244","OMIM:612577","GARD:10496","DOID:0060202","MEDGEN:393399"],"synonyms":[{"name":"ALS11","type":"exact"},{"name":"FIG4 amyotrophic lateral sclerosis","type":"exact"},{"name":"amyotrophic lateral sclerosis 11","type":"exact"},{"name":"amyotrophic lateral sclerosis caused by mutation in FIG4","type":"exact"},{"name":"amyotrophic lateral sclerosis type 11","type":"exact"}],"termid":"MONDO:0012945","terms_by_termid":{"MONDO:0012945":null},"xrefs":{"Monarch":{"xref_id":"0012945"}}}


id: PBO:0058069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4288","termid":"PBO:0058069"}


id: PBO:0062184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily N member 4","termid":"PBO:0062184"}


id: PBO:0004480
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sjogren's syndrome","termid":"PBO:0004480"}


id: PBO:0054823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2236","termid":"PBO:0054823"}


id: GO:0018040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-glutamic acid amide by hydrolysis and oxidation of an interior Glu-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0087"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-glutamic acid amidation (obsolete GO:0018040)","termid":"GO:0018040"}


id: PBO:0080150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventral anterior homeobox 2","termid":"PBO:0080150"}


id: GO:0046656
data:
  {"annotated_genes":["SJAG_00106","SJAG_04156","SJAG_00815","SJAG_03275","SJAG_02225","SJAG_02408","SJAG_01126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89779,104284,104432,105571,107832,111903,113172],"is_not":false,"summary":null,"term":"GO:0046656"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of folic acid, pteroylglutamic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound biosynthetic process","termid":"GO:0009396"},{"relation_name":"is_a","term_name":"water-soluble vitamin biosynthetic process","termid":"GO:0042364"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"},{"relation_name":"is_a","term_name":"folic acid metabolic process","termid":"GO:0046655"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00815":null,"SJAG_01126":null,"SJAG_02225":null,"SJAG_02408":null,"SJAG_03275":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0042559"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0042559","GO:0008150"],"is_obsolete":false,"name":"folic acid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Folic_acid"],"synonyms":[{"name":"folate biosynthesis","type":"exact"},{"name":"folate biosynthetic process","type":"exact"},{"name":"folic acid anabolism","type":"exact"},{"name":"folic acid biosynthesis","type":"exact"},{"name":"folic acid formation","type":"exact"},{"name":"folic acid synthesis","type":"exact"},{"name":"vitamin B9 biosynthesis","type":"exact"},{"name":"vitamin B9 biosynthetic process","type":"exact"},{"name":"vitamin M biosynthesis","type":"exact"},{"name":"vitamin M biosynthetic process","type":"exact"}],"termid":"GO:0046656","terms_by_termid":{"GO:0046656":null}}


id: PBO:0088136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane zinc transporter; transports zinc from cytosol to vacuole for storage; also has role in resistance to zinc shock resulting from sudden influx of zinc into cytoplasm; human ortholog SLC30A10 functions as a Mn transporter and mutations in SLC30A10 cause neurotoxic accumulation of Mn in liver and brain; ZRC1 has a paralog, COT1, that arose from the whole genome duplication","termid":"PBO:0088136"}


id: PBO:0041548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 18 open reading frame 32","termid":"PBO:0041548"}


id: GO:0004336
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactosyl-N-acylsphingosine + H2O = D-galactose + N-acylsphingosine.","definition_xrefs":["EC:3.2.1.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylceramidase activity","termid":"GO:0017042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"galactosylceramidase activity","secondary_identifiers":["RHEA:14297","Reactome:R-HSA-1606564","MetaCyc:GALACTOSYLCERAMIDASE-RXN"],"synonyms":[{"name":"D-galactosyl-N-acylsphingosine galactohydrolase activity","type":"related"},{"name":"beta-galactocerebrosidase activity","type":"related"},{"name":"beta-galactosylceramidase activity","type":"related"},{"name":"ceramide galactosidase activity","type":"related"},{"name":"cerebroside beta-galactosidase activity","type":"related"},{"name":"cerebroside galactosidase activity","type":"related"},{"name":"galactocerebrosidase activity","type":"related"},{"name":"galactocerebroside beta-galactosidase activity","type":"related"},{"name":"galactocerebroside galactosidase activity","type":"related"},{"name":"galactocerebroside-beta-D-galactosidase activity","type":"related"},{"name":"galactosylceramidase I","type":"related"},{"name":"galactosylceramide beta-galactosidase activity","type":"related"},{"name":"galactosylcerebrosidase activity","type":"related"},{"name":"galcerase activity","type":"related"},{"name":"lactosylceramidase I","type":"related"},{"name":"lactosylceramidase activity","type":"related"}],"termid":"GO:0004336"}


id: PBO:0002411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCHC type zinc finger protein","termid":"PBO:0002411"}


id: GO:0048601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structures of an oocyte are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of an oocyte.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"oocyte development","termid":"GO:0048599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte morphogenesis","synonyms":[{"name":"oocyte morphogenesis during differentiation","type":"exact"}],"termid":"GO:0048601"}


id: MOD:00316
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4,N4-dimethyl-L-asparagine.","definition_xrefs":["PubMed:12964758","PubMed:8783012","Unimod:36#N","RESID:AA0311","PubMed:14570711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dimethylated residue","termid":"MOD:00429"},{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"},{"relation_name":"is_a","term_name":"methylated asparagine","termid":"MOD:00673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N4,N4-dimethyl-L-asparagine","synonyms":[{"name":"(2S)-2-amino-4-(dimethylamino)-4-oxobutanoic acid","type":"exact"},{"name":"2-amino-N4,N4-dimethylbutanediamic acid","type":"exact"},{"name":"Dimethyl","type":"related"},{"name":"MOD_RES N4,N4-dimethylasparagine","type":"exact"},{"name":"N(gamma),N(gamma)-dimethylasparagine","type":"exact"},{"name":"N4,N4-dimethyl-L-asparagine","type":"exact"},{"name":"N4,N4-dimethylated L-asparagine","type":"exact"},{"name":"N4Me2Asn","type":"exact"},{"name":"beta-dimethylasparagine","type":"related"},{"name":"di-Methylation","type":"related"}],"termid":"MOD:00316"}


id: PBO:0079111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA splicing endonuclease subunit 2 pseudogene 1","termid":"PBO:0079111"}


id: GO:0106038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process carried out at the cellular level, which results in the arrangement of constituent parts of a vesicle. Vesicle assembly begins with membrane bending (GO:0097753) and ends with fusion of the vesicle after vesicle scission (GO:0099050).","definition_xrefs":["GOC:bc","PMID:25898166","GOC:aruk"],"gene_count":0,"genotype_count":0,"name":"obsolete vesicle assembly (obsolete GO:0106038)","synonyms":[{"name":"vesicle biosynthesis","type":"exact"},{"name":"vesicle formation","type":"exact"}],"termid":"GO:0106038"}


id: FYPO:0005025
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic chromosome condensation does not occur in centromeric regions (i.e. adjacent to the kinetochores).","definition_xrefs":["PMID:21633354","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished mitotic chromosome condensation","termid":"FYPO:0003844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000631","FYPO:0001985","FYPO:0000337","FYPO:0000641","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abolished mitotic chromosome centromere condensation","synonyms":[{"name":"abolished chromosome centromere condensation during mitotic cell cycle","type":"related"},{"name":"abolished mitotic chromosome centromere condensation during vegetative growth","type":"exact"},{"name":"abolished mitotic chromosome condensation at centromere","type":"exact"},{"name":"mitotic chromosome condensation abolished at centromere","type":"exact"},{"name":"mitotic chromosome kinetochore condensation","type":"exact"}],"termid":"FYPO:0005025"}


id: PBO:0075270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 23","termid":"PBO:0075270"}


id: PBO:0081286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 70 pseudogene 1","termid":"PBO:0081286"}


id: PBO:0031816
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_autophagy","termid":"PBO:0031816"}


id: PBO:0089396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sad1-UNC-like protein involved protein folding in the ER","termid":"PBO:0089396"}


id: FYPO:0000357
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the mating projection is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"},{"relation_name":"output_of","term_name":"abnormal shmoo formation","termid":"FYPO:0000568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000301","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal shmoo morphology","synonyms":[{"name":"abnormal conjugation tube morphology","type":"exact"},{"name":"abnormal mating projection morphology","type":"exact"},{"name":"mating projection morphology: abnormal","type":"related"}],"termid":"FYPO:0000357"}


id: GO:0061546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a tyramine by a cell in which the tyramine acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary amine secretion, neurotransmission","termid":"GO:0061532"},{"relation_name":"is_a","term_name":"tyramine secretion","termid":"GO:0061545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"tyramine secretion, neurotransmission","termid":"GO:0061546"}


id: GO:0006410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cellular synthesis of DNA on a template of RNA.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription, RNA-dependent (obsolete GO:0006410)","synonyms":[{"name":"transcription, RNA-dependent","type":"exact"}],"termid":"GO:0006410"}


id: PATO:0000548
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000548 blue light sensitivity value (obsolete PATO:0000548)","termid":"PATO:0000548"}


id: PBO:0089126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP-associated protein Aar2","termid":"PBO:0089126"}


id: MONDO:1010410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epilepsy that occurs in white-tufted-ear marmoset.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy, non-human animal","termid":"MONDO:1010001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, white-tufted-ear marmoset","secondary_identifiers":["OMIA:000344-9483"],"termid":"MONDO:1010410","xrefs":{"Monarch":{"xref_id":"1010410"}}}


id: GO:0007630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sudden, usually upward, movement off the ground or other surface through sudden muscular effort in the legs, following exposure to an external stimulus.","definition_xrefs":["GOC:jid","ISBN:0198606907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult locomotory behavior","termid":"GO:0008344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"jump response","termid":"GO:0007630"}


id: PBO:0083513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF HEF3/YNL014W","termid":"PBO:0083513"}


id: PBO:0076896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 50","termid":"PBO:0076896"}


id: PBO:0041435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 9 open reading frame 24","termid":"PBO:0041435"}


id: PBO:0001135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L13 (predicted)","termid":"PBO:0001135"}


id: GO:0034320
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: hexanoyl-CoA + an alcohol = CoA + a hexyl ester.","definition_xrefs":["GOC:mah","PMID:16361250"],"gene_count":0,"genotype_count":0,"name":"obsolete alcohol O-hexanoyltransferase activity (obsolete GO:0034320)","termid":"GO:0034320"}


id: GO:0099070
data:
  {"annotated_genes":["SJAG_03264","SJAG_02761","SJAG_02737","SJAG_04841","SJAG_03540","SJAG_01196","SJAG_02624","SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96774,99873,100927,112256,113538,116435,117641,118155],"is_not":false,"summary":null,"term":"GO:0099070"}]},"cv_name":"cellular_component","definition":"A microtubule bundle that has a constant length, and in which microtubule sliding does not take place.","definition_xrefs":["PMID:26124291","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule bundle","termid":"GO:0097427"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01196":null,"SJAG_02624":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_03073":null,"SJAG_03264":null,"SJAG_03540":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"static microtubule bundle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Q-MT bundle","type":"narrow"},{"name":"quiescent cell MT bundle","type":"narrow"},{"name":"quiescent cell microtubule bundle","type":"narrow"}],"termid":"GO:0099070","terms_by_termid":{"GO:0099070":null}}


id: PR:O60111
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized aarF domain-containing protein kinase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC1 family protein MCP2 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15C4.02","secondary_identifiers":["UniProtKB:O60111"],"synonyms":[{"name":"Spom972h-ADCK1","type":"exact"}],"termid":"PR:O60111"}


id: PBO:0040542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-glucuronyltransferase 1","termid":"PBO:0040542"}


id: PBO:0077109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 17A","termid":"PBO:0077109"}


id: GO:0097237
data:
  {"annotated_genes":["SJAG_00365","SJAG_00141","SJAG_02599","SJAG_04608","SJAG_02973","SJAG_00489","SJAG_00614","SJAG_01351","SJAG_02960","SJAG_04953","SJAG_01457","SJAG_03316","SJAG_01596","SJAG_04632","SJAG_04516","SJAG_04399","SJAG_01995","SJAG_03166","SJAG_02515","SJAG_01162","SJAG_02106","SJAG_02010","SJAG_00668","SJAG_01404","SJAG_05181","SJAG_00903","SJAG_01199","SJAG_04788","SJAG_00219","SJAG_04063","SJAG_03494","SJAG_04404","SJAG_02988","SJAG_04242","SJAG_04125","SJAG_03797","SJAG_00270","SJAG_01651","SJAG_02276","SJAG_05256","SJAG_03108","SJAG_01628","SJAG_03303","SJAG_03497","SJAG_00988","SJAG_04726","SJAG_04823","SJAG_02907","SJAG_01216","SJAG_02630","SJAG_03653","SJAG_01344","SJAG_01612","SJAG_06611","SJAG_03623","SJAG_01973","SJAG_01734","SJAG_00179","SJAG_03288","SJAG_03476","SJAG_04403","SJAG_04674","SJAG_02247"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92606,96591,89591,97869,99820,117675,94168,102365,114196,115616,112958,94503,118097,91927,99344,102292,108204,92605,87452,98702,98516,118239,87447,87549,106093,111779,112504,103120,94163,101302,94436,99549,114095,112996],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990748"},{"annotations":[112223],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110095"},{"annotations":[96858,92788,117700,96540,96502,107919],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0098849"},{"annotations":[100316,113235],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140114"},{"annotations":[94678,117787,116866,99497,104534,108320],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"},{"annotations":[104537],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140041"},{"annotations":[86884,101721],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070458"},{"annotations":[67661,63235,64985,68329,68330,57344,104715,57343,68331,64986,94679,68204,104798,106283],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0098869"},{"annotations":[95020,102978],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0046294"},{"annotations":[57887,98774,64688,99654,92616,109627,88880,68142,88458,109583],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxic stimulus.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to toxic substance","termid":"GO:0009636"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":63,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00179":null,"SJAG_00219":null,"SJAG_00270":null,"SJAG_00365":null,"SJAG_00489":null,"SJAG_00614":null,"SJAG_00668":null,"SJAG_00903":null,"SJAG_00988":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01344":null,"SJAG_01351":null,"SJAG_01404":null,"SJAG_01457":null,"SJAG_01596":null,"SJAG_01612":null,"SJAG_01628":null,"SJAG_01651":null,"SJAG_01734":null,"SJAG_01973":null,"SJAG_01995":null,"SJAG_02010":null,"SJAG_02106":null,"SJAG_02247":null,"SJAG_02276":null,"SJAG_02515":null,"SJAG_02599":null,"SJAG_02630":null,"SJAG_02907":null,"SJAG_02960":null,"SJAG_02973":null,"SJAG_02988":null,"SJAG_03108":null,"SJAG_03166":null,"SJAG_03288":null,"SJAG_03303":null,"SJAG_03316":null,"SJAG_03476":null,"SJAG_03494":null,"SJAG_03497":null,"SJAG_03623":null,"SJAG_03653":null,"SJAG_03797":null,"SJAG_04063":null,"SJAG_04125":null,"SJAG_04242":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04404":null,"SJAG_04516":null,"SJAG_04608":null,"SJAG_04632":null,"SJAG_04674":null,"SJAG_04726":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null,"SJAG_05256":null,"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to toxic substance","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0097237","terms_by_termid":{"GO:0019430":null,"GO:0046294":null,"GO:0061692":null,"GO:0070458":null,"GO:0098849":null,"GO:0098869":null,"GO:0110095":null,"GO:0140041":null,"GO:0140114":null,"GO:1990748":null}}


id: MONDO:0007669
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal cysts and diabetes syndrome (RCAD) is a rare form of maturity-onset diabetes of the young (MODY) characterized clinically by heterogeneous cystic renal disease and early-onset familial non-autoimmune diabetes. Pancreatic atrophy, liver dysfunction and genital tract anomalies are also features of the syndrome.","definition_xrefs":["Orphanet:93111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"maturity-onset diabetes of the young","termid":"MONDO:0018911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005015"}],"interesting_parent_ids":["MONDO:0005015","MONDO:0004335","MONDO:0019254","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"renal cysts and diabetes syndrome","secondary_identifiers":["MESH:C535520","SCTID:446641003","OMIM:137920","UMLS:C0431693","GARD:10221","DECIPHER:47","DOID:0111101","MEDGEN:96569","NCIT:C123018","NANDO:2201073"],"synonyms":[{"name":"CAKUT with diabetes","type":"exact"},{"name":"FJHN atypical","type":"related"},{"name":"FJHN, atypical","type":"related"},{"name":"HNF1B-MODY","type":"exact"},{"name":"HNF1B-related renal cysts and diabetes syndrome","type":"exact"},{"name":"MODY type 5","type":"related"},{"name":"MODY5","type":"exact"},{"name":"RCAD","type":"exact"},{"name":"RCAD syndrome","type":"exact"},{"name":"atypical FJHN","type":"exact"},{"name":"atypical familial juvenile hyperuricemic nephropathy","type":"exact"},{"name":"congenital anomalies of the kidney and urinary tract with diabetes","type":"exact"},{"name":"familial hypoplastic glomerulocystic kidney","type":"exact"},{"name":"glomerulocystic kidney disease, hypoplastic type","type":"related"},{"name":"glomerulocystic kidney, familial hypoplastic","type":"related"},{"name":"hepatocyte nuclear Factor 1-beta-associated monogenic diabetes","type":"exact"},{"name":"hyperuricemic nephropathy, familial juvenile, atypical","type":"related"},{"name":"hypoplastic type glomerulocystic kidney disease","type":"exact"},{"name":"maturity onset diabetes of the Young, type 5","type":"exact"},{"name":"maturity-onset diabetes of the Young, type 5","type":"related"},{"name":"maturity-onset diabetes of the young type 5","type":"related"},{"name":"renal cysts and diabetes syndrome","type":"exact"},{"name":"renal cysts-maturity-onset diabetes of the young syndrome","type":"exact"},{"name":"renal dysfunction-early-onset diabetes syndrome","type":"exact"}],"termid":"MONDO:0007669","xrefs":{"Monarch":{"xref_id":"0007669"}}}


id: PBO:0111802
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase family","termid":"PBO:0111802"}


id: PBO:0080956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Z-DNA binding protein 1","termid":"PBO:0080956"}


id: GO:0032535
data:
  {"annotated_genes":["SJAG_02019","SJAG_00521","SJAG_04100","SJAG_00279","SJAG_04479","SJAG_01993","SJAG_02700","SJAG_01894","SJAG_03401","SJAG_04332","SJAG_03602","SJAG_03086","SJAG_02532","SJAG_02566","SJAG_01805","SJAG_04668"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91809,98398,113813,87732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[113416,95168,105190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006884"},{"annotations":[91887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009992"},{"annotations":[93283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045793"},{"annotations":[90158,102243,104660,101248,89304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030833"},{"annotations":[94030,97932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008361"},{"annotations":[97933],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061387"}]},"cv_name":"biological_process","definition":"A process that modulates the size of a cellular component.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"is_a","term_name":"regulation of anatomical structure size","termid":"GO:0090066"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_01805":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02019":null,"SJAG_02532":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_03401":null,"SJAG_03602":null,"SJAG_04100":null,"SJAG_04332":null,"SJAG_04479":null,"SJAG_04668":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular component size","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032535","terms_by_termid":{"GO:0006884":null,"GO:0008361":null,"GO:0009992":null,"GO:0030833":null,"GO:0045793":null,"GO:0051016":null,"GO:0061387":null}}


id: PBO:0078249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 25/OR9-2 (pseudogene)","termid":"PBO:0078249"}


id: PBO:0074279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"slit guidance ligand 1","termid":"PBO:0074279"}


id: MONDO:0012826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scoliosis, isolated, susceptibility to, 4","secondary_identifiers":["MEDGEN:393659","OMIM:612238","UMLS:C2677108"],"synonyms":[{"name":"IS4","type":"exact"},{"name":"scoliosis, idiopathic, susceptibility to, 4","type":"exact"},{"name":"scoliosis, isolated, susceptibility to, 4","type":"exact"}],"termid":"MONDO:0012826","xrefs":{"Monarch":{"xref_id":"0012826"}}}


id: PBO:0075357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOWAHC pseudogene 5","termid":"PBO:0075357"}


id: GO:0102674
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 24-methylenelophenol + a demethylated methyl acceptor = 9xi-episterol + a methylated methyl acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete C4-demethylase activity (obsolete GO:0102674)","termid":"GO:0102674"}


id: GO:0005019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with platelet-derived growth factor isoform PDGF-BB or PDGF-AB to initiate a change in cell activity.","definition_xrefs":["PMID:1657917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"platelet-derived growth factor receptor activity","termid":"GO:0005017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0140096","GO:0038023","GO:0003824","GO:0016301","GO:0004672"],"is_obsolete":false,"name":"platelet-derived growth factor beta-receptor activity","synonyms":[{"name":"PDGF beta-receptor activity","type":"exact"},{"name":"betaPDGF receptor activity","type":"related"}],"termid":"GO:0005019"}


id: GO:0052124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism within its host organism in response to physical parameters involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete energy taxis within host (obsolete GO:0052124)","termid":"GO:0052124"}


id: PBO:0053615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 654","termid":"PBO:0053615"}


id: GO:1900626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of arugosin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"arugosin biosynthetic process","termid":"GO:1900587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of arugosin biosynthetic process","synonyms":[{"name":"regulation of arugosin anabolism","type":"exact"},{"name":"regulation of arugosin biosynthesis","type":"exact"},{"name":"regulation of arugosin formation","type":"exact"},{"name":"regulation of arugosin synthesis","type":"exact"}],"termid":"GO:1900626"}


id: PR:Q9P7P1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ker1 gene.","definition_xrefs":["UniProtKB:Q9P7P1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I subunit rpa14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1718.03","synonyms":[{"name":"DNA-directed RNA polymerase I 17 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase I subunit A14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ker1","type":"exact"},{"name":"nucleolar protein ker1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7P1"}


id: GO:0046025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 S-adenosyl-L-methionine + precorrin-6Y = 2 S-adenosyl-L-homocysteine + precorrin-8X + CO2.","definition_xrefs":["EC:2.1.1.132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"precorrin-6Y C5,15-methyltransferase (decarboxylating) activity","secondary_identifiers":["MetaCyc:2.1.1.132-RXN","RHEA:17477"],"synonyms":[{"name":"S-adenosyl-L-methionine:1-precorrin-6Y C5,15-methyltransferase (C-12-decarboxylating)","type":"related"},{"name":"precorrin-6 methyltransferase activity","type":"broad"},{"name":"precorrin-6Y methylase activity","type":"broad"}],"termid":"GO:0046025"}


id: GO:0005287
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of basic amino acids from one side of a membrane to the other. Acidic amino acids have a pH above 7. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basic amino acid transmembrane transporter activity","termid":"GO:0015174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"high-affinity basic amino acid transmembrane transporter activity","synonyms":[{"name":"high affinity basic amino acid transmembrane transporter activity","type":"exact"},{"name":"high-affinity basic amino acid transporter activity","type":"broad"}],"termid":"GO:0005287"}


id: PBO:0028195
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_azetidine-2-carboxylic_acid_acetyltransferase_activity","termid":"PBO:0028195"}


id: PBO:0002271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis protein Dph4 (predicted)","termid":"PBO:0002271"}


id: PBO:0067650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 825, pseudogene","termid":"PBO:0067650"}


id: SO:0002250
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS region corresponding to a propeptide of a polypeptide.","direct_ancestors":[{"relation_name":"is_a","term_name":"CDS_region","termid":"SO:0000851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"propeptide_region_of_CDS","synonyms":[{"name":"INSDC_feature:propeptide","type":"exact"},{"name":"propeptide region of CDS","type":"exact"}],"termid":"SO:0002250"}


id: PBO:0003098
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hailey-Hailey disease","termid":"PBO:0003098"}


id: FYPO:0005051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to regions of chromatin containing genes that can be transcribed by RNA polymerase II is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah","PMID:20605454"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin","termid":"FYPO:0001679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to chromatin at RNA polymerase II-regulated genes during nitrogen starvation","synonyms":[{"name":"decreased protein localisation to chromatin at RNA polymerase II-regulated genes during nitrogen starvation","type":"exact"},{"name":"decreased protein localization to chromatin at RNA polymerase II-regulated genes during nitrogen depletion","type":"exact"},{"name":"decreased protein localization to chromatin at RNA polymerase II-regulated genes during nitrogen deprivation","type":"exact"},{"name":"decreased protein localization to chromatin at polymerase II regulated genes during nitrogen starvation","type":"exact"},{"name":"reduced protein localization to chromatin at RNA polymerase II-regulated genes during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005051"}


id: GO:0098642
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen trimer that forms networks.","definition_xrefs":["PMID:21421911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen trimer","termid":"GO:0005581"},{"relation_name":"part_of","term_name":"collagen network","termid":"GO:0098645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"network-forming collagen trimer","termid":"GO:0098642"}


id: MONDO:0001302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal enlargement of the heart resulting from long-standing hypertension.","definition_xrefs":["NCIT:C4907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertensive heart disease","secondary_identifiers":["ICD9:402","ICD9:402.9","MEDGEN:508889","UMLS:C0152105","SCTID:64715009","icd11.foundation:1210166201","DOID:11516"],"synonyms":[{"name":"hypertensive cardiomegaly","type":"related"},{"name":"hypertensive cardiopathy","type":"related"},{"name":"hypertensive cardiovascular disease","type":"related"},{"name":"hypertensive heart disease","type":"exact"}],"termid":"MONDO:0001302","xrefs":{"Monarch":{"xref_id":"0001302"}}}


id: GO:0033715
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: inosine + O2 = 9-riburonosylhypoxanthine + 2 H2O; (1a) 2 inosine + O2 = 2 5'-dehydroinosine + 2 H2O, and (1b) 2 5'-dehydroinosine + O2 = 2 9-riburonosylhypoxanthine + 2 H2O.","definition_xrefs":["EC:1.1.3.28","RHEA:28651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"nucleoside oxidase activity","secondary_identifiers":["MetaCyc:NUCLEOSIDE-OXIDASE-RXN"],"synonyms":[{"name":"nucleoside:oxygen 5'-oxidoreductase activity","type":"related"}],"termid":"GO:0033715"}


id: PBO:0000805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex subunit Rpc11","termid":"PBO:0000805"}


id: GO:0097110
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a scaffold protein. Scaffold proteins are crucial regulators of many key signaling pathways. Although not strictly defined in function, they are known to interact and/or bind with multiple members of a signaling pathway, tethering them into complexes.","definition_xrefs":["Wikipedia:Scaffold_protein","GOC:sjp","GOC:BHF","PMID:10433269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"scaffold protein binding","termid":"GO:0097110"}


id: PBO:0063412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 1A","termid":"PBO:0063412"}


id: GO:0061327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anterior Malpighian tubule over time, from its formation to the mature structure. The pair of anterior tubules arise from a dorsal region of the embryonic hindgut and projects forwards through the body cavity. A Malpighian tubule is a fine, thin-walled excretory tubule in insects which connects with the posterior part of the gut.","definition_xrefs":["GOC:dph","PMID:19783135","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Malpighian tubule development","termid":"GO:0072002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior Malpighian tubule development","termid":"GO:0061327"}


id: PBO:0065145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protamine 1","termid":"PBO:0065145"}


id: GO:0018325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient phosphorylation of peptidyl-cysteine to form S-phospho-L-cysteine.","definition_xrefs":["RESID:AA0034"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via S-phospho-L-cysteine (obsolete GO:0018325)","termid":"GO:0018325"}


id: GO:0060380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of binding to single-stranded telomeric DNA.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of single-stranded telomeric DNA binding (obsolete GO:0060380)","synonyms":[{"name":"regulation of telomeric ssDNA binding","type":"exact"}],"termid":"GO:0060380"}


id: MONDO:0010493
data:
  {"annotated_genes":["SJAG_02358"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84816],"is_not":false,"summary":null,"term":"MONDO:0010493"}]},"cv_name":"mondo","definition":"Any Diamond-Blackfan anemia in which the cause of the disease is a mutation in the TSR2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Diamond-Blackfan anemia","termid":"MONDO:0015253"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02358":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"Diamond-Blackfan anemia 14 with mandibulofacial dysostosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111897","GARD:15275","MEDGEN:895657","OMIM:300946","UMLS:C4225422"],"synonyms":[{"name":"DBA14","type":"related"},{"name":"Diamond-Blackfan anaemia 14 with mandibulofacial dysostosis, X-linked recessive","type":"exact"},{"name":"Diamond-Blackfan anaemia caused by mutation in TSR2","type":"exact"},{"name":"Diamond-Blackfan anemia 14 with mandibulofacial dysostosis","type":"exact"},{"name":"Diamond-Blackfan anemia 14 with mandibulofacial dysostosis, X-linked recessive","type":"exact"},{"name":"Diamond-Blackfan anemia caused by mutation in TSR2","type":"exact"},{"name":"TSR2 Diamond-Blackfan anaemia","type":"exact"},{"name":"TSR2 Diamond-Blackfan anemia","type":"exact"}],"termid":"MONDO:0010493","terms_by_termid":{"MONDO:0010493":null},"xrefs":{"Monarch":{"xref_id":"0010493"}}}


id: PBO:0001550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RACK1 ortholog Cpc2","termid":"PBO:0001550"}


id: PBO:0039689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC down-regulated 1","termid":"PBO:0039689"}


id: PR:Q9UU77
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCP1E11.10 gene.","definition_xrefs":["UniProtKB:Q9UU77","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat-containing protein P1E11.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP1E11.10","synonyms":[{"name":"Spom972h-SPCP1E11.10","type":"exact"}],"termid":"PR:Q9UU77"}


id: PBO:0005399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-dependent FMN reductase (predicted)","termid":"PBO:0005399"}


id: GO:1900879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (Z)-nonadeca-1,14-diene.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"olefin biosynthetic process","termid":"GO:1900674"},{"relation_name":"is_a","term_name":"(Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"(Z)-nonadeca-1,14-diene biosynthetic process","synonyms":[{"name":"(Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"(Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"(Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"(Z)-nonadeca-1,14-diene synthesis","type":"exact"}],"termid":"GO:1900879"}


id: MONDO:0016187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of myofibrillar proteins","termid":"MONDO:0016186"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qualitative or quantitative defects of desmin","secondary_identifiers":["GARD:20426","Orphanet:209041","UMLS:C5680839","MEDGEN:1842905"],"termid":"MONDO:0016187","xrefs":{"Monarch":{"xref_id":"0016187"}}}


id: MONDO:0006589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Contact dermatitis associated with allergens or irritants found in the workplace.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"contact dermatitis","termid":"MONDO:0005480"},{"relation_name":"is_a","term_name":"occupational disorder","termid":"MONDO:0100366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"occupational dermatitis","secondary_identifiers":["ICD9:692.9","NCIT:C34859","DOID:4404","UMLS:C0028796","MESH:D009783","EFO:1000744","SCTID:402587003","MEDGEN:14449"],"synonyms":[{"name":"occupational allergic contact dermatitis","type":"exact"},{"name":"occupational dermatitis","type":"exact"},{"name":"occupational eczema","type":"exact"},{"name":"occupational eczema (disorder) [ambiguous]","type":"exact"}],"termid":"MONDO:0006589","xrefs":{"Monarch":{"xref_id":"0006589"}}}


id: MONDO:0019884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal trisomy of the long arm of chromosome 10 (10q) is characterized by pre- and postnatal growth retardation, a pattern of specific facial features, hypotonia, and developmental and psychomotor delay.","definition_xrefs":["Orphanet:96102"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete chromosomal anomaly with cataract (obsolete MONDO:0020226)","termid":"MONDO:0020226"},{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 10","termid":"MONDO:0016961"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 10q","secondary_identifiers":["MESH:C538087","NORD:934","SCTID:718689000","GARD:19317","UMLS:C2931728","MEDGEN:419480"],"synonyms":[{"name":"Chromosome 10, Distal Trisomy 10q","type":"exact"},{"name":"distal duplication 10q","type":"exact"},{"name":"distal trisomy type 10q","type":"exact"},{"name":"telomeric duplication 10q","type":"exact"},{"name":"trisomy 10qter","type":"exact"}],"termid":"MONDO:0019884","xrefs":{"Monarch":{"xref_id":"0019884"}}}


id: MONDO:1012395
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rupture of the cranial cruciate ligament, non-human animal","termid":"MONDO:1011960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rupture of the cranial cruciate ligament, dog","secondary_identifiers":["OMIA:001474-9615"],"termid":"MONDO:1012395","xrefs":{"Monarch":{"xref_id":"1012395"}}}


id: MONDO:1012375
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"follicular dysplasia and interface dermatitis, non-human animal","termid":"MONDO:1011750"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follicular dysplasia and interface dermatitis, dog","secondary_identifiers":["OMIA:001369-9615"],"termid":"MONDO:1012375","xrefs":{"Monarch":{"xref_id":"1012375"}}}


id: MONDO:0013712
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary pulmonary alveolar proteinosis in which the cause of the disease is a mutation in the CSF2RB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary pulmonary alveolar proteinosis","termid":"MONDO:0012580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant metabolism dysfunction, pulmonary, 5","secondary_identifiers":["GARD:15793","UMLS:C3280574","OMIM:614370","MEDGEN:482204"],"synonyms":[{"name":"CSF2RB hereditary pulmonary alveolar proteinosis","type":"exact"},{"name":"Csf2Rb deficiency","type":"related"},{"name":"Pap due to Csf2Rb deficiency","type":"related"},{"name":"SMDP5","type":"related"},{"name":"hereditary pulmonary alveolar proteinosis caused by mutation in CSF2RB","type":"exact"},{"name":"pulmonary alveolar proteinosis 5","type":"related"},{"name":"surfactant metabolism dysfunction, pulmonary, 5","type":"exact"},{"name":"surfactant metabolism dysfunction, pulmonary, type 5","type":"exact"}],"termid":"MONDO:0013712","xrefs":{"Monarch":{"xref_id":"0013712"}}}


id: PBO:0089082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome base subcomplex ATPase subunit Rpt1","termid":"PBO:0089082"}


id: GO:0016645
data:
  {"annotated_genes":["SJAG_00106","SJAG_03712","SJAG_02388","SJAG_04156","SJAG_01126","SJAG_01668","SJAG_01466","SJAG_01903","SJAG_00120","SJAG_01061","SJAG_01198"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004146"},{"annotations":[87184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036382"},{"annotations":[104286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004487"},{"annotations":[107837,111909,104287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004488"},{"annotations":[96132,97910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004489"},{"annotations":[97911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106312"},{"annotations":[96133,97912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106313"},{"annotations":[117507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004657"},{"annotations":[101280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004735"},{"annotations":[87186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042602"},{"annotations":[92474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004754"},{"annotations":[109191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004755"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00120":null,"SJAG_01061":null,"SJAG_01126":null,"SJAG_01198":null,"SJAG_01466":null,"SJAG_01668":null,"SJAG_01903":null,"SJAG_02388":null,"SJAG_03712":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH group of donors","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.5.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on the CH-NH group of donors, other acceptors","type":"narrow"}],"termid":"GO:0016645","terms_by_termid":{"GO:0004146":null,"GO:0004487":null,"GO:0004488":null,"GO:0004489":null,"GO:0004657":null,"GO:0004735":null,"GO:0004754":null,"GO:0004755":null,"GO:0036382":null,"GO:0042602":null,"GO:0106312":null,"GO:0106313":null}}


id: GO:0061813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a ARID domain. The AT-rich interaction domain (ARID) is an ~100-amino acid DNA-binding module found in a large number of eukaryotic transcription factors.","definition_xrefs":["PMID:18270511","GOC:dph","InterPro:IPR001606"],"gene_count":0,"genotype_count":0,"name":"obsolete ARID domain binding (obsolete GO:0061813)","termid":"GO:0061813"}


id: PBO:0042338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD70 molecule","termid":"PBO:0042338"}


id: PBO:0062087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 18 pseudogene","termid":"PBO:0062087"}


id: PBO:0075193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 5","termid":"PBO:0075193"}


id: PBO:0054241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1623","termid":"PBO:0054241"}


id: GO:1900903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hexadecanal biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"regulation of hexadecanal biosynthetic process","termid":"GO:1900902"},{"relation_name":"is_a","term_name":"negative regulation of hexadecanal metabolic process","termid":"GO:1900906"},{"relation_name":"negatively_regulates","term_name":"hexadecanal biosynthetic process","termid":"GO:0006634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hexadecanal biosynthetic process","synonyms":[{"name":"down regulation of hexadecanal anabolism","type":"related"},{"name":"down regulation of hexadecanal biosynthesis","type":"related"},{"name":"down regulation of hexadecanal biosynthetic process","type":"exact"},{"name":"down regulation of hexadecanal formation","type":"related"},{"name":"down regulation of hexadecanal synthesis","type":"related"},{"name":"down regulation of palmitaldehyde biosynthesis","type":"related"},{"name":"down regulation of palmitaldehyde biosynthetic process","type":"related"},{"name":"down-regulation of hexadecanal anabolism","type":"related"},{"name":"down-regulation of hexadecanal biosynthesis","type":"related"},{"name":"down-regulation of hexadecanal biosynthetic process","type":"exact"},{"name":"down-regulation of hexadecanal formation","type":"related"},{"name":"down-regulation of hexadecanal synthesis","type":"related"},{"name":"down-regulation of palmitaldehyde biosynthesis","type":"related"},{"name":"down-regulation of palmitaldehyde biosynthetic process","type":"related"},{"name":"downregulation of hexadecanal anabolism","type":"related"},{"name":"downregulation of hexadecanal biosynthesis","type":"related"},{"name":"downregulation of hexadecanal biosynthetic process","type":"exact"},{"name":"downregulation of hexadecanal formation","type":"related"},{"name":"downregulation of hexadecanal synthesis","type":"related"},{"name":"downregulation of palmitaldehyde biosynthesis","type":"related"},{"name":"downregulation of palmitaldehyde biosynthetic process","type":"related"},{"name":"inhibition of hexadecanal anabolism","type":"narrow"},{"name":"inhibition of hexadecanal biosynthesis","type":"narrow"},{"name":"inhibition of hexadecanal biosynthetic process","type":"narrow"},{"name":"inhibition of hexadecanal formation","type":"narrow"},{"name":"inhibition of hexadecanal synthesis","type":"narrow"},{"name":"inhibition of palmitaldehyde biosynthesis","type":"narrow"},{"name":"inhibition of palmitaldehyde biosynthetic process","type":"narrow"},{"name":"negative regulation of hexadecanal anabolism","type":"related"},{"name":"negative regulation of hexadecanal biosynthesis","type":"related"},{"name":"negative regulation of hexadecanal formation","type":"related"},{"name":"negative regulation of hexadecanal synthesis","type":"related"},{"name":"negative regulation of palmitaldehyde biosynthesis","type":"related"},{"name":"negative regulation of palmitaldehyde biosynthetic process","type":"related"}],"termid":"GO:1900903"}


id: GO:0014891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process, occurring in striated muscle, that is characterized by a decrease in protein content, fiber diameter, force production and fatigue resistance in response to different conditions such as starvation, aging and disuse.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle adaptation","termid":"GO:0014888"},{"relation_name":"is_a","term_name":"muscle atrophy","termid":"GO:0014889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle atrophy","termid":"GO:0014891"}


id: GO:0060841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the venous blood vessel over time from its initial formation to the mature structure. Venous blood vessels carry blood back to the heart after the capillary bed.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel development","termid":"GO:0001568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venous blood vessel development","termid":"GO:0060841"}


id: GO:0098722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Division of a stem cell during which it retains its identity and buds off a daughter cell with a new identity.","definition_xrefs":["GOC:dos","PMID:18513950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric cell division","termid":"GO:0008356"},{"relation_name":"is_a","term_name":"stem cell division","termid":"GO:0017145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"asymmetric stem cell division","termid":"GO:0098722"}


id: GO:0008572
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + phosphate. The hydrolysis of ATP required for the ATP-dependent assembly of nucleosome cores, in decondensation of sperm chromatin and in other histone-involving processes.","definition_xrefs":["EC:3.6.4.11"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleoplasmin ATPase activity (obsolete GO:0008572)","synonyms":[{"name":"nucleoplasmin ATPase activity","type":"exact"}],"termid":"GO:0008572"}


id: PBO:0040674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B cell receptor associated protein 31 pseudogene 2","termid":"PBO:0040674"}


id: PBO:0070676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 47","termid":"PBO:0070676"}


id: PBO:0087649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Hat1p-Hat2p histone acetyltransferase complex; required for high affinity binding of the complex to free histone H4, thereby enhancing Hat1p activity; similar to human RbAp46 and 48; has a role in telomeric silencing","termid":"PBO:0087649"}


id: PBO:0046987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member L, pseudogene","termid":"PBO:0046987"}


id: PBO:0048629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine insufficiency regulator of glutaminase lncRNA","termid":"PBO:0048629"}


id: MONDO:0054591
data:
  {"annotated_genes":["SJAG_03321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85005],"is_not":false,"summary":null,"term":"MONDO:0054591"}]},"cv_name":"mondo","definition":"A neurodevelopmental disorder characterized by delayed psychomotor development, intellectual disability, behavioral disorders, mild craniofacial anomalies, and variable congenital defects of the cardiac and/or urogenital systems.","definition_xrefs":["OMIM:617516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Stankiewicz-Isidor syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4479599","MEDGEN:1375936"],"synonyms":[{"name":"STISS","type":"related"},{"name":"Stankiewicz-Isidor syndrome","type":"exact"}],"termid":"MONDO:0054591","terms_by_termid":{"MONDO:0054591":null},"xrefs":{"Monarch":{"xref_id":"0054591"}}}


id: PBO:0029544
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_mixed_population_including_long_cells_(obsolete_FYPO:0002178)","termid":"PBO:0029544"}


id: MONDO:0043959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplastic process that resembles a malignant lymphoma, but has a benign course.","definition_xrefs":["NCIT:C3825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic system disorder","termid":"MONDO:0005833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"pseudolymphoma","secondary_identifiers":["EFO:1001831","MESH:D019310","UMLS:C0221269","SCTID:19750001","MEDGEN:67450"],"synonyms":[{"name":"benign lymphoid hyperplasia","type":"related"},{"name":"hyperplasia, reactive lymphoid","type":"related"},{"name":"hyperplasias, reactive lymphoid","type":"related"},{"name":"lymphocytoma","type":"related"},{"name":"lymphocytomas","type":"related"},{"name":"lymphoid Hyperplasias, reactive","type":"related"},{"name":"lymphoid hyperplasia, reactive","type":"related"},{"name":"pseudolymphoma","type":"exact"},{"name":"pseudolymphomas","type":"related"},{"name":"reactive lymphoid Hyperplasias","type":"related"},{"name":"reactive lymphoid hyperplasia","type":"related"}],"termid":"MONDO:0043959","xrefs":{"Monarch":{"xref_id":"0043959"}}}


id: MONDO:0008064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasal bones, absence of","secondary_identifiers":["MESH:C562753","UMLS:C0339851","OMIM:161480","MEDGEN:90946"],"synonyms":[{"name":"nasal bones, absence of","type":"exact"}],"termid":"MONDO:0008064","xrefs":{"Monarch":{"xref_id":"0008064"}}}


id: GO:0061867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The mitotic spindle organization process by which a mitotic spindle becomes asymmetric either in position or structure.","definition_xrefs":["PMID:26659188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic spindle organization","termid":"GO:0007052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0000226","GO:0007049"],"is_obsolete":false,"name":"establishment of mitotic spindle asymmetry","termid":"GO:0061867"}


id: GO:0097609
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A motile cilium found in dinoflagellates. It trails the cell and acts as a steering rudder. It is often partially contained in a furrow called the sulcus, and emerges from a flagellar pore located in the sulcus.","definition_xrefs":["GOC:at","Wikipedia:Dinoflagellate#Morphology"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9+2 motile cilium","termid":"GO:0097729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"longitudinal flagellum","synonyms":[{"name":"longitudinal cilium","type":"exact"}],"termid":"GO:0097609"}


id: MONDO:0008659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of cobalamin metabolism and transport","termid":"MONDO:0019220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"transcobalamin I deficiency","secondary_identifiers":["MEDGEN:90993","GARD:4522","MESH:C562798","SCTID:237933007","UMLS:C0342700","OMIM:193090","Orphanet:2967"],"synonyms":[{"name":"Haptocorrin deficiency","type":"exact"},{"name":"R Binder deficiency with lactoferrin deficiency","type":"related"},{"name":"TCI deficiency","type":"exact"},{"name":"Tcn1 deficiency","type":"related"},{"name":"cobalamin Pseudodeficiency due to transcobalamin deficiency","type":"related"},{"name":"cobalamin R Binder Protein deficiency","type":"related"},{"name":"transcobalamin 1 deficiency","type":"related"},{"name":"transcobalamin 1 deficiency with lactoferrin deficiency","type":"related"},{"name":"transcobalamin I deficiency","type":"exact"},{"name":"transcobalamin-1 deficiency","type":"exact"}],"termid":"MONDO:0008659","xrefs":{"Monarch":{"xref_id":"0008659"}}}


id: PBO:0080867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YjeF N-terminal domain containing 3","termid":"PBO:0080867"}


id: PBO:0053634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LINC00680-GUSBP4 readthrough, transcribed pseudogene","termid":"PBO:0053634"}


id: GO:0055091
data:
  {"annotated_genes":["SJAG_02064","SJAG_04317"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92523,103017],"is_not":false,"summary":null,"term":"GO:0055091"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of phospholipid within an organism or cell.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid homeostasis","termid":"GO:0055088"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02064":null,"SJAG_04317":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phospholipid homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0055091","terms_by_termid":{"GO:0055091":null}}


id: MOD:01031
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dimethylbenzyl","synonyms":[{"name":"diMeBzl","type":"exact"}],"termid":"MOD:01031"}


id: PBO:0030004
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sporulation_resulting_in_formation_of_ascus_with_more_or_fewer_than_four_spores","termid":"PBO:0030004"}


id: MONDO:0017372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fetal varicella syndrome (CVS) is an acquired developmental anomaly syndrome characterized by skin, neurological, ocular, limbs and growth defects secondary to maternal Varicella-Zoster Virus (VZV) infection.","definition_xrefs":["Orphanet:291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"infectious embryofetopathy","termid":"MONDO:0016511"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital varicella syndrome","secondary_identifiers":["GARD:45","NORD:1003","SCTID:277644009","UMLS:C0343560","ICD9:771.2","MEDGEN:87473","NCIT:C116800","icd11.foundation:2071159826"],"synonyms":[{"name":"Varicella embryopathy","type":"related"},{"name":"Varicella virus antenatal infection","type":"related"},{"name":"antenatal varicella virus infection","type":"exact"},{"name":"fetal effects of chickenpox","type":"related"},{"name":"fetal effects of varicella zoster virus","type":"related"},{"name":"fetal varicella infection","type":"related"},{"name":"fetal varicella zoster syndrome","type":"related"},{"name":"foetal effects of chickenpox","type":"related"},{"name":"foetal effects of varicella zoster virus","type":"related"},{"name":"foetal varicella infection","type":"related"},{"name":"foetal varicella zoster syndrome","type":"related"},{"name":"mother-to-child transmission of varicella syndrome","type":"exact"}],"termid":"MONDO:0017372","xrefs":{"Monarch":{"xref_id":"0017372"}}}


id: PBO:0061254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide synthase interacting protein","termid":"PBO:0061254"}


id: PBO:0002249
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.40","termid":"PBO:0002249"}


id: GO:0090269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a fibroblast growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"fibroblast growth factor production","termid":"GO:0090269"}


id: SO:0001661
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A TATA box core promoter of a gene transcribed by RNA polymerase II.","definition_xrefs":["PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TATA_box","termid":"SO:0000174"},{"relation_name":"part_of","term_name":"RNApol_II_core_promoter","termid":"SO:0001669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_polymerase_II_TATA_box","synonyms":[{"name":"RNA polymerase II TATA box","type":"exact"}],"termid":"SO:0001661"}


id: GO:0035987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an endoderm cell, a cell of the inner of the three germ layers of the embryo.","definition_xrefs":["GOC:yaf","PMID:17624332","CL:0000223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"endoderm formation","termid":"GO:0001706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endodermal cell differentiation","synonyms":[{"name":"endoderm cell differentiation","type":"exact"}],"termid":"GO:0035987"}


id: GO:0099505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the potential difference across a presynaptic membrane.","definition_xrefs":["GOC:dph","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of presynaptic membrane potential","synonyms":[{"name":"regulation of pre-synaptic membrane potential","type":"exact"}],"termid":"GO:0099505"}


id: MONDO:0003957
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pineoblastoma occurring in adults.","definition_xrefs":["NCIT:C8292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult pineal parenchymal tumor","termid":"MONDO:0003248"},{"relation_name":"is_a","term_name":"pineoblastoma","termid":"MONDO:0016722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult pineoblastoma","secondary_identifiers":["DOID:6648","MEDGEN:83794","UMLS:C0281332"],"synonyms":[{"name":"adult pineoblastoma","type":"exact"},{"name":"pineoblastoma","type":"broad"},{"name":"pineoblastoma of adults","type":"exact"}],"termid":"MONDO:0003957","xrefs":{"Monarch":{"xref_id":"0003957"}}}


id: MONDO:0012970
data:
  {"annotated_genes":["SJAG_03303"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86820],"is_not":false,"summary":null,"term":"MONDO:0012970"}]},"cv_name":"mondo","definition":"Any microvascular complications of diabetes, susceptibility in which the cause of the disease is a mutation in the SOD2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microvascular complications of diabetes, susceptibility","termid":"MONDO:0000065"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03303":null},"genotype_count":0,"is_obsolete":false,"name":"microvascular complications of diabetes, susceptibility to, 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:612634","MEDGEN:382533","UMLS:C2675128"],"synonyms":[{"name":"MVCD6","type":"related"},{"name":"SOD2 microvascular complications of diabetes, susceptibility","type":"exact"},{"name":"microvascular complications of diabetes 6","type":"exact"},{"name":"microvascular complications of diabetes, susceptibility caused by mutation in SOD2","type":"exact"},{"name":"microvascular complications of diabetes, susceptibility to, 6","type":"exact"},{"name":"microvascular complications of diabetes, susceptibility to, type 6","type":"exact"},{"name":"nephropathy, diabetic, susceptibility to","type":"related"}],"termid":"MONDO:0012970","terms_by_termid":{"MONDO:0012970":null},"xrefs":{"Monarch":{"xref_id":"0012970"}}}


id: GO:0016966
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + 2 ferricytochrome c + nitrous oxide = 2 H+ + 2 ferrocytochrome c + 2 nitric oxide.","definition_xrefs":["EC:1.7.2.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor","termid":"GO:0016662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"nitric oxide reductase activity","secondary_identifiers":["MetaCyc:NITRIC-OXIDE-REDUCTASE-RXN","KEGG_REACTION:R00294","GO:0016967","RHEA:30211","GO:0016968"],"synonyms":[{"name":"CYP55","type":"narrow"},{"name":"P450 nitric oxide reductase activity","type":"narrow"},{"name":"P450nor","type":"narrow"},{"name":"cytochrome bc nitric oxide reductase activity","type":"narrow"},{"name":"nitric-oxide reductase activity","type":"related"},{"name":"nitrogen oxide reductase activity","type":"related"},{"name":"nitrous-oxide:(acceptor) oxidoreductase (NO-forming)","type":"related"},{"name":"nitrous-oxide:acceptor oxidoreductase (NO-forming)","type":"related"}],"termid":"GO:0016966"}


id: PBO:0051639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP3 pseudogene 2","termid":"PBO:0051639"}


id: FYECO:0000133
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Describes experimental conditions in which the amount of oxygen available during growth or the assay was controlled.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000133 oxygen level (obsolete FYECO:0000133)","termid":"FYECO:0000133"}


id: PBO:0012530
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_division_of","termid":"PBO:0012530"}


id: GO:1990263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A MAPK cascade that occurs as a result of deprivation of nourishment.","definition_xrefs":["PMID:7501024","GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete spore wall assembly MAPK cascade (obsolete GO:1990263)","synonyms":[{"name":"MAPK cascade in response to starvation","type":"exact"},{"name":"MAPK cascade involved in nutrient response signaling","type":"exact"}],"termid":"GO:1990263"}


id: MONDO:0957113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular channelopathy","termid":"MONDO:0019119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurological muscular channelopathy due to a genetic calcium channel defect","secondary_identifiers":["GARD:19565","UMLS:C5681686","MEDGEN:1842522","Orphanet:98740"],"termid":"MONDO:0957113","xrefs":{"Monarch":{"xref_id":"0957113"}}}


id: PBO:0056375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 8 interacting protein 2","termid":"PBO:0056375"}


id: FYPO:0005935
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of occurrence of meiotic recombination is normal (i.e. indistinguishable from wild type). Meiotic recombination is a cellular process in which double strand breaks are formed and repaired through a double Holliday junction intermediate, resulting in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes.","definition_xrefs":["GO:0007131","PMID:19470480","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic recombination","termid":"FYPO:0000488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic recombination frequency","synonyms":[{"name":"normal occurrence of meiotic recombination","type":"exact"}],"termid":"FYPO:0005935"}


id: MONDO:0017584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare bone disease that arises due to secondary hyperparathyroidism in patients with chronic renal failure receiving dialysis characterized by 'uglifying' the appearance of the face","definition_xrefs":["PMID:15490409","PMID:27545627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone disorder","termid":"MONDO:0005381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sagliker syndrome","secondary_identifiers":["MEDGEN:1808631","UMLS:C5681093","Orphanet:300493","GARD:21233"],"termid":"MONDO:0017584","xrefs":{"Monarch":{"xref_id":"0017584"}}}


id: PATO:0000651
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being no longer merged with another entity.","definition_xrefs":["PATOC:nw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unfused from","synonyms":[{"name":"unfused","type":"exact"}],"termid":"PATO:0000651"}


id: GO:0019561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phenylalanine under anaerobic conditions; occurs via the intermediates phenylpyruvate and phenylacetaldehyde.","definition_xrefs":["MetaCyc:ANAPHENOXI-PWY","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-phenylalanine catabolic process","termid":"GO:0006559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"anaerobic phenylalanine oxidation","termid":"GO:0019561"}


id: MONDO:0010086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Sudden infant death syndrome (SIDS) is the unexpected, sudden death of a child under age 1 which cannot be explained after a thorough investigation is conducted. Infants who are affected by the condition generally appear healthy with no suspicious signs and symptoms prior to the incident. It is the leading cause of death in infants age 1 to 12 months old. The exact underlying cause of SIDS is unknown; however, scientists suspect that it is likely a multifactorial condition (associated with the effects of multiple genes in combination with lifestyle and environmental factors). Although there is no guaranteed way to prevent SIDS, the American Academy of Pediatrics has a published list of recommendationsfor risk reduction. Please click on the link to access this resource.","gene_count":0,"genotype_count":0,"name":"obsolete sudden infant death syndrome (obsolete MONDO:0010086)","secondary_identifiers":["DOID:9007","SCTID:51178009","NCIT:C85173","ICD9:798.0","MedDRA:10042439","ICD10WHO:R95","OMIM:272120","MESH:D013398"],"synonyms":[{"name":"Crib death (context-dependent category)","type":"exact"},{"name":"SIDS","type":"exact"},{"name":"Sids","type":"related"},{"name":"cot death","type":"exact"},{"name":"cot death (context-dependent category)","type":"exact"},{"name":"crib death","type":"exact"},{"name":"sudden death of nonspecific cause in infancy","type":"exact"},{"name":"sudden infant death syndrome","type":"exact"},{"name":"sudden infant death syndrome (context-dependent category)","type":"exact"},{"name":"sudden infant death syndrome (finding)","type":"exact"},{"name":"sudden infant death syndrome NOS (context-dependent category)","type":"exact"},{"name":"sudden infant death syndrome, susceptibility to","type":"exact"}],"termid":"MONDO:0010086","xrefs":{"Monarch":{"xref_id":"0010086"}}}


id: PR:P78774
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An actin-related protein 2/3 complex subunit 1A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03179","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-related protein 2/3 complex subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.06","secondary_identifiers":["UniProtKB:P78774"],"synonyms":[{"name":"Spom972h-ARPC1A","type":"exact"},{"name":"arp2/3 complex 41 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"p41-ARC (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78774"}


id: GO:0009030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + thiamine phosphate = ADP + H+ + thiamine diphosphate.","definition_xrefs":["RHEA:15913","EC:2.7.4.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"thiamine-phosphate kinase activity","secondary_identifiers":["KEGG_REACTION:R00617","MetaCyc:THI-P-KIN-RXN"],"synonyms":[{"name":"ATP:thiamine-phosphate phosphotransferase activity","type":"related"},{"name":"thiamin monophosphatase activity","type":"related"},{"name":"thiamin monophosphokinase activity","type":"related"},{"name":"thiamin phosphate kinase activity","type":"exact"},{"name":"thiamin-monophosphate kinase activity","type":"related"},{"name":"thiamin-phosphate kinase activity","type":"exact"},{"name":"thiamine-monophosphate kinase activity","type":"related"}],"termid":"GO:0009030"}


id: PBO:0028363
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septated_cell","termid":"PBO:0028363"}


id: GO:0060210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The estrous cycle phase in which there is subsiding follicular function.","definition_xrefs":["GOC:dph","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"estrous cycle phase","termid":"GO:0060206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metestrus","termid":"GO:0060210"}


id: GO:0051606
data:
  {"annotated_genes":["SJAG_02258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050982"}]},"cv_name":"biological_process","definition":"The series of events in which a stimulus is received by a cell or organism and converted into a molecular signal.","definition_xrefs":["GOC:add","GOC:mah","GOC:dph","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of stimulus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"perception of stimulus","type":"related"},{"name":"stimulus detection","type":"exact"},{"name":"stimulus sensing","type":"related"}],"termid":"GO:0051606","terms_by_termid":{"GO:0050982":null}}


id: MONDO:0006398
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A multinodular intermediate fibroblastic neoplasm arising from the retroperitoneum. It is characterized by the presence of spindle-shaped fibroblasts and myofibroblasts, and a chronic inflammatory infiltrate composed of eosinophils, lymphocytes and plasma cells.","definition_xrefs":["NCIT:C39741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory myofibroblastic tumor","termid":"MONDO:0015798"},{"relation_name":"is_a","term_name":"retroperitoneal neoplasm","termid":"MONDO:0024645"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retroperitoneal inflammatory myofibroblastic tumor","secondary_identifiers":["EFO:1000510","MEDGEN:271681","UMLS:C1514921"],"synonyms":[{"name":"retroperitoneal inflammatory myofibroblastic tumor","type":"exact"},{"name":"retroperitoneal space inflammatory myofibroblastic tumor","type":"exact"},{"name":"retroperitoneal space inflammatory myofibroblastic tumour","type":"exact"}],"termid":"MONDO:0006398","xrefs":{"Monarch":{"xref_id":"0006398"}}}


