# terms

id: PBO:0026991
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_galactose:mannose_ratio_in_glycoprotein_glycan","termid":"PBO:0026991"}


id: GO:0033504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the floor plate over time from its initial formation until its mature state.","definition_xrefs":["GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"neural tube development","termid":"GO:0021915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floor plate development","termid":"GO:0033504"}


id: PBO:0062548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily M member 1, pseudogene","termid":"PBO:0062548"}


id: PBO:0042767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 68","termid":"PBO:0042767"}


id: PBO:0078810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 27-1","termid":"PBO:0078810"}


id: MONDO:0700040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Jaundice that appears during the neonatal period due to high levels of unconjugated bilirubin that are a result of maternal-fetal ABO incompatibility.","definition_xrefs":["PMID:24382531","PMID:20598320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperbilirubinemia","termid":"MONDO:0024288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"neonatal jaundice due to ABO incompatibility","secondary_identifiers":["MEDGEN:1683766","SCTID:16716281000119108","UMLS:C5190730"],"termid":"MONDO:0700040","xrefs":{"Monarch":{"xref_id":"0700040"}}}


id: PATO:0001824
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A wetness quality inhering in a bearer by virtue of the bearer's not being covered by a liquid.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wetness","termid":"PATO:0001822"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dry","termid":"PATO:0001824"}


id: GO:2001133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a methane from a methanethiol.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"methanogenesis","termid":"GO:0015948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006091","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"methane biosynthetic process from methanethiol","termid":"GO:2001133"}


id: PBO:0050227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 5","termid":"PBO:0050227"}


id: GO:0051258
data:
  {"annotated_genes":["SJAG_02566","SJAG_01894","SJAG_00521","SJAG_01215","SJAG_07018","SJAG_04100","SJAG_01756","SJAG_02886","SJAG_04479","SJAG_02737","SJAG_00279","SJAG_03086","SJAG_02761","SJAG_04982","SJAG_00856","SJAG_03540","SJAG_02609","SJAG_03835","SJAG_02624","SJAG_01268","SJAG_02700","SJAG_02245","SJAG_01993","SJAG_00677"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97213,98338,64577,93306,91808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030041"},{"annotations":[116436],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030954"},{"annotations":[113813,87732,91809,98398],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0051016"},{"annotations":[108340,110074,109103],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007020"},{"annotations":[105937,116441,99879,99580,116686,100485],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051415"},{"annotations":[118161,100486],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051417"},{"annotations":[117648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046785"},{"annotations":[104660,102243,101248,90158,89304],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0030833"}]},"cv_name":"biological_process","definition":"The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_00677":null,"SJAG_00856":null,"SJAG_01215":null,"SJAG_01268":null,"SJAG_01756":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02245":null,"SJAG_02566":null,"SJAG_02609":null,"SJAG_02624":null,"SJAG_02700":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_03086":null,"SJAG_03540":null,"SJAG_03835":null,"SJAG_04100":null,"SJAG_04479":null,"SJAG_04982":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"protein polymerization","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein polymer biosynthesis","type":"exact"},{"name":"protein polymer biosynthetic process","type":"exact"},{"name":"protein polymer formation","type":"exact"}],"termid":"GO:0051258","terms_by_termid":{"GO:0007020":null,"GO:0030041":null,"GO:0030833":null,"GO:0030954":null,"GO:0046785":null,"GO:0051016":null,"GO:0051415":null,"GO:0051417":null}}


id: PBO:0091890
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cullin-associated Methyltransferase Complex subunit","termid":"PBO:0091890"}


id: GO:0031593
data:
  {"annotated_genes":["SJAG_04384","SJAG_03345","SJAG_00941","SJAG_00052","SJAG_02992"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70139,75027,75114,77439],"is_not":false,"summary":null,"term":"GO:0031593"},{"annotations":[76754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036435"}]},"cv_name":"molecular_function","definition":"Binding to a protein upon poly-ubiquitination of the target protein.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification-dependent protein binding","termid":"GO:0140030"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00941":null,"SJAG_02992":null,"SJAG_03345":null,"SJAG_04384":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"polyubiquitin modification-dependent protein binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0031593","terms_by_termid":{"GO:0031593":null,"GO:0036435":null}}


id: MONDO:0009297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial Renal Glucosuria (FRG) is characterized by the presence of persistent isolated glucosuria in the absence of both generalized proximal tubular dysfunction and hyperglycemia. FRG is usually considered a benign entity as most patients are not affected by severe clinical consequences. Polyuria and enuresis and later a mild growth and pubertal maturation delay are the only manifestations that have been reported during a follow-up period of 30 years. Episodic dehydration and ketosis during pregnancy and starvation and an increased incidence of urinary tract infections have occasionally been reported in severe cases. FRG is caused by loss-of-function mutations in the gene SLC5A2 (16p11.2).","definition_xrefs":["Orphanet:69076"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"renal tubular transport disease","termid":"MONDO:0006510"},{"relation_name":"is_a","term_name":"glucose transport disorder","termid":"MONDO:0019226"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0005240"],"is_obsolete":false,"name":"familial renal glucosuria","secondary_identifiers":["icd11.foundation:381783069","OMIM:233100","MedDRA:10038457","SCTID:267430007","ICD9:271.4","MEDGEN:757652","UMLS:C3245525","NORD:1658","GARD:7548","MESH:D006030","DOID:9432"],"synonyms":[{"name":"GLYS","type":"related"},{"name":"Glys1","type":"related"},{"name":"Renal Glycosuria","type":"exact"},{"name":"SGLT2 deficiency","type":"exact"},{"name":"familial renal glucosuria","type":"exact"},{"name":"glycosuria, renal","type":"related"},{"name":"renal diabetes","type":"exact"},{"name":"renal glucosuria","type":"related"},{"name":"renal glycosuria","type":"related"}],"termid":"MONDO:0009297","xrefs":{"Monarch":{"xref_id":"0009297"}}}


id: PBO:0015662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructo-2-kinase/fructose-2,6-bisphosphate 2-phosphatase (predicted)","termid":"PBO:0015662"}


id: GO:0052025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host endomembrane system. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host membrane","termid":"GO:0141171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host cell endomembrane system","synonyms":[{"name":"disruption by symbiont of host cell membrane","type":"broad"},{"name":"modification by symbiont of host cell membrane","type":"broad"},{"name":"symbiont-mediated disruption of host cell membrane","type":"broad"},{"name":"symbiont-mediated perturbation of host cell membrane","type":"broad"}],"termid":"GO:0052025"}


id: PBO:0083591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF Q0010","termid":"PBO:0083591"}


id: GO:0097224
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The segment of the sperm flagellum that attaches to the implantation fossa of the nucleus in the sperm head; from the remnant of the centriole at this point, the axoneme extends throughout the length of the flagellum.","definition_xrefs":["MP:0009830","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete sperm connecting piece (obsolete GO:0097224)","termid":"GO:0097224"}


id: PR:000027576
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.1, initiator methionine removed phosphorylated form that has been phosphorylated by Haspin in Schizosaccharomyces pombe. Example: UniProtKB:P09988-1, 2-136, Thr-4, MOD:00047.","definition_xrefs":["PMID:20929775","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht1/Phos(T3)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"H3-pT3","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.1, initiator methionine removed phosphorylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht1/InitMet-/Phos:1","type":"exact"},{"name":"hht1/InitMet-/Phos:(T4)","type":"exact"},{"name":"hht1/Phos(T3)","type":"exact"}],"termid":"PR:000027576"}


id: GO:0019262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of N-acetylneuraminate, the anion of 5-(acetylamino)-3,5-dideoxy-D-glycero-D-galacto-non-3-ulosonic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylneuraminate metabolic process","termid":"GO:0006054"},{"relation_name":"is_a","term_name":"amino sugar catabolic process","termid":"GO:0046348"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"N-acetylneuraminate catabolic process","secondary_identifiers":["MetaCyc:P441-PWY"],"synonyms":[{"name":"N-acetylneuraminate breakdown","type":"exact"},{"name":"N-acetylneuraminate catabolism","type":"exact"},{"name":"N-acetylneuraminate degradation","type":"exact"}],"termid":"GO:0019262"}


id: PR:Q9USG8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug190 gene.","definition_xrefs":["UniProtKB:Q9USG8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 190 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP31B10.06","synonyms":[{"name":"Spom972h-mug190","type":"exact"}],"termid":"PR:Q9USG8"}


id: PBO:0085579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in 5.8S rRNA processing; Ccr4p-like RNase required for correct 3'-end formation of 5.8S rRNA at site E; similar to Ngl1p; NGL2 has a paralog, NGL3, that arose from the whole genome duplication","termid":"PBO:0085579"}


id: MONDO:1010901
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronal ceroid lipofuscinosis that occurs in cats due to a mutation in the MFSD8 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, domestic cat","termid":"MONDO:1011571"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, MFSD8-related, domestic cat","secondary_identifiers":["OMIA:001962-9685"],"synonyms":[{"name":"CLN7","type":"exact"},{"name":"neuronal ceroid lipofuscinosis, 7, domestic cat","type":"related"}],"termid":"MONDO:1010901","xrefs":{"Monarch":{"xref_id":"1010901"}}}


id: GO:1901178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving spheroidene.","definition_xrefs":["UniPathway:UPA00683","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll metabolic process","termid":"GO:0016122"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"spheroidene metabolic process","synonyms":[{"name":"spheroidene metabolism","type":"exact"}],"termid":"GO:1901178"}


id: PBO:0113037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall protein with similarity to glucanases; targeted to vacuole via AP-3 pathway; scw4 scw10 double mutants exhibit defects in mating; SCW4 has a paralog, SCW10, that arose from the whole genome duplication","termid":"PBO:0113037"}


id: GO:0160190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together the peroxisome and the mitochondrial outer membrane, establishing the localization of the peroxisome close to the mitochondrion.","definition_xrefs":["PMID:29720625","PMID:38669296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030674","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"peroxisome-mitochondrion membrane tether activity","termid":"GO:0160190"}


id: PBO:0086965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory protein that binds Pdc2p and Thi2p transcription factors; activates thiamine biosynthesis transcription factors Pdc2p and Thi2p by binding to them, but releases and de-activates them upon binding to thiamine pyrophosphate (TPP), the end product of the pathway; has similarity to decarboxylases but enzymatic activity is not detected","termid":"PBO:0086965"}


id: PBO:0058032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4253","termid":"PBO:0058032"}


id: PBO:0061069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFKB activating protein pseudogene 1","termid":"PBO:0061069"}


id: PBO:0073114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase/reductase family 42E, member 1 pseudogene 2","termid":"PBO:0073114"}


id: FYPO:0006311
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA-3'-diphospho-5'-guanosine diphosphatase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal DNA-3'-diphospho-5'-guanosine diphosphatase activity","termid":"FYPO:0006310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abolished DNA-3'-diphospho-5'-guanosine diphosphatase activity","synonyms":[{"name":"DNA-3'-diphospho-5'-guanosine diphosphatase activity abolished","type":"exact"}],"termid":"FYPO:0006311"}


id: FYPO:0005708
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the interphase microtubule organizing center (iMTOC) is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cytoskeleton during vegetative growth","termid":"FYPO:0003184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to iMTOC","synonyms":[{"name":"normal protein localisation to iMTOC","type":"exact"},{"name":"normal protein localization to iMTOC during mitotic cell cycle","type":"related"},{"name":"normal protein localization to iMTOC during vegetative growth","type":"exact"},{"name":"normal protein localization to interphase microtubule organizing center","type":"exact"}],"termid":"FYPO:0005708"}


id: GO:1901805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of beta-glucoside.","definition_xrefs":["PMID:15205427","GOC:TermGenie","PMID:16390337","Unipathway:UPA00237","GOC:yaf","PMID:8990303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside catabolic process","termid":"GO:0016139"},{"relation_name":"is_a","term_name":"beta-glucoside metabolic process","termid":"GO:1901804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"beta-glucoside catabolic process","synonyms":[{"name":"beta-glucoside breakdown","type":"exact"},{"name":"beta-glucoside catabolism","type":"exact"},{"name":"beta-glucoside degradation","type":"exact"}],"termid":"GO:1901805"}


id: PBO:0078789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 12-1","termid":"PBO:0078789"}


id: PBO:0003476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage factor one Cft1 (predicted)","termid":"PBO:0003476"}


id: FYPO:0007565
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA binding at an RNA polymerase II proximal promoter that contains a Mlu1 cell cycle box (MCB) by a gene product does not occur, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:8223442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished RNA polymerase II proximal promoter sequence-specific DNA binding","termid":"FYPO:0002003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000653","FYPO:0001985"],"is_obsolete":false,"name":"abolished DNA binding at MCB","synonyms":[{"name":"RNA polymerase II proximal promoter sequence-specific DNA binding abolished at MCB","type":"exact"},{"name":"abolished DNA binding at Mlu1 cell cycle box","type":"exact"},{"name":"abolished RNA polymerase II proximal promoter sequence-specific DNA binding at MCB","type":"exact"},{"name":"abolished RNA polymerase II proximal promoter sequence-specific DNA binding at Mlu1 cell cycle box","type":"exact"}],"termid":"FYPO:0007565"}


id: GO:0033114
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by a cyanelle thylakoid membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid thylakoid lumen","termid":"GO:0031978"},{"relation_name":"part_of","term_name":"cyanelle thylakoid","termid":"GO:0009843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cyanelle thylakoid lumen","termid":"GO:0033114"}


id: PBO:0055302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2729","termid":"PBO:0055302"}


id: GO:0014020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the neural tube from an epithelial cell sheet (the neuroepithelium or neural plate). In primary neurulation, the cells surrounding the neural plate direct the neural plate cells to proliferate, invaginate, and pinch off from the surface to form a hollow epithelial tube. Primary neurulation is the typical mechanism of formation of the anterior neural tube.","definition_xrefs":["GOC:ef","ISBN:0878932585","PMID:15327780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic epithelial tube formation","termid":"GO:0001838"},{"relation_name":"part_of","term_name":"neural tube formation","termid":"GO:0001841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary neural tube formation","secondary_identifiers":["GO:0014024"],"synonyms":[{"name":"neural rod cavitation","type":"related"},{"name":"primary neural tube morphogenesis","type":"exact"},{"name":"primary neurulation","type":"exact"}],"termid":"GO:0014020"}


id: PBO:0088355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp21","termid":"PBO:0088355"}


id: MONDO:0010828
data:
  {"annotated_genes":["SJAG_04529"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85562],"is_not":false,"summary":null,"term":"MONDO:0010828"}]},"cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the PRPF31 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"PRPF31-related retinopathy","termid":"MONDO:0800395"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04529":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 11","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:10383","UMLS:C1838601","DOID:0110408","ICD10CM:H35.5","MEDGEN:325055","OMIM:600138","MESH:C563991"],"synonyms":[{"name":"PRPF31 retinitis pigmentosa","type":"exact"},{"name":"RP 11","type":"related"},{"name":"RP11","type":"exact"},{"name":"retinitis pigmentosa 11","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in PRPF31","type":"exact"},{"name":"retinitis pigmentosa type 11","type":"exact"}],"termid":"MONDO:0010828","terms_by_termid":{"MONDO:0010828":null},"xrefs":{"Monarch":{"xref_id":"0010828"}}}


id: GO:0014706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a striated muscle over time, from its formation to the mature structure. Striated muscle contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle. Skeletal muscle myoblasts fuse to form myotubes and eventually multinucleated muscle fibers. The fusion of cardiac cells is very rare and can only form binucleate cells.","definition_xrefs":["GOC:mtg_muscle","CL:0000737","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle tissue development","termid":"GO:0060537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle tissue development","termid":"GO:0014706"}


id: MONDO:0009191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lowry-Wood syndrome is characterized by the association of epiphyseal dysplasia, short stature, microcephaly and, in the first reported cases, congenital nystagmus. So far, less than 10 cases have been described in the literature. Variable degrees of intellectual deficit have also been reported. Other occasional features include retinitis pigmentosa and coxa vara. Transmission appears to be autosomal recessive.","definition_xrefs":["Orphanet:1824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNU4ATAC spectrum disorder","termid":"MONDO:0100558"},{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lowry-Wood syndrome","secondary_identifiers":["GARD:264","MEDGEN:162899","icd11.foundation:1713071905","MedDRA:10062600","SCTID:721975004","UMLS:C0796021","OMIM:226960","MESH:C537038"],"synonyms":[{"name":"LWS","type":"exact"},{"name":"Lowry Wood syndrome","type":"exact"},{"name":"Lowry-Wood syndrome","type":"exact"},{"name":"epiphyseal dysplasia, microcephaly and nystagmus","type":"related"},{"name":"epiphyseal dysplasia, multiple, with microcephaly and retinal dystrophy","type":"exact"},{"name":"epiphyseal dysplasia-microcephaly-nystagmus syndrome","type":"exact"}],"termid":"MONDO:0009191","xrefs":{"Monarch":{"xref_id":"0009191"}}}


id: GO:0010205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The mechanism by which high light intensity inhibits photosynthesis through inactivation of the D1 protein of photosystem II.","definition_xrefs":["GOC:mtg_electron_transport","PMID:12068126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to high light intensity","termid":"GO:0009644"},{"relation_name":"is_a","term_name":"negative regulation of photosynthesis, light reaction","termid":"GO:0043155"},{"relation_name":"negatively_regulates","term_name":"photosynthetic electron transport chain","termid":"GO:0009767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"photoinhibition","secondary_identifiers":["Wikipedia:Photoinhibition"],"synonyms":[{"name":"photosystem II inhibition","type":"broad"}],"termid":"GO:0010205"}


id: MONDO:1012088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alpha fucosidosis, non-human animal","termid":"MONDO:1011783"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha fucosidosis, domestic cat","secondary_identifiers":["OMIA:000396-9685"],"termid":"MONDO:1012088","xrefs":{"Monarch":{"xref_id":"1012088"}}}


id: SO:0000468
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"One of the pieces of sequence that make up a golden path.","definition_xrefs":["SO:rd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly_component","termid":"SO:0000143"},{"relation_name":"part_of","term_name":"golden_path","termid":"SO:0000688"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golden_path_fragment","synonyms":[{"name":"golden path fragment","type":"exact"}],"termid":"SO:0000468"}


id: GO:0016750
data:
  {"annotated_genes":["SJAG_04305"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160210"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a succinyl group to an oxygen atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"},{"relation_name":"is_a","term_name":"succinyltransferase activity","termid":"GO:0016748"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"O-succinyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016750","terms_by_termid":{"GO:0160210":null}}


id: FYPO:0004294
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell has a septum in an abnormal location when the population in which the cell is found is in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized septum","termid":"FYPO:0004293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"mislocalized septum in stationary phase","synonyms":[{"name":"abnormal septum localization in stationary phase","type":"related"},{"name":"abnormal septum location in stationary phase","type":"exact"},{"name":"abnormal septum position in stationary phase","type":"exact"},{"name":"abnormal septum positioning in stationary phase","type":"related"},{"name":"asymmetric septum in stationary phase","type":"exact"},{"name":"asymmetrically located septum in stationary phase","type":"exact"},{"name":"mislocalised septum in stationary phase","type":"exact"},{"name":"misplaced septum in stationary phase","type":"exact"}],"termid":"FYPO:0004294"}


id: PBO:0054572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1974","termid":"PBO:0054572"}


id: MONDO:0017741
data:
  {"annotated_genes":["SJAG_04316","SJAG_04053","SJAG_01491","SJAG_03188"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012248"},{"annotations":[86153,86154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013162"},{"annotations":[85435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014142"},{"annotations":[85341,85340,85342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009364"},{"annotations":[85428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014140"},{"annotations":[86148,86147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013154"},{"annotations":[86152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013159"},{"annotations":[85433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014141"},{"annotations":[86150,86151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013160"}]},"cv_name":"mondo","definition":"A disease that has its basis in the disruption of protein O-linked glycosylation.","definition_xrefs":["MONDO:patterns/basis_in_disruption_of_process"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"},{"relation_name":"is_a","term_name":"glycoprotein metabolism disease","termid":"MONDO:0045010"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01491":null,"SJAG_03188":null,"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"disorder of protein O-glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1842631","icd11.foundation:1883085871","Orphanet:309447","GARD:21336","UMLS:C5681041"],"synonyms":[{"name":"disorder of protein O-linked glycosylation","type":"exact"},{"name":"protein O-linked glycosylation disease","type":"exact"}],"termid":"MONDO:0017741","terms_by_termid":{"MONDO:0009364":null,"MONDO:0012248":null,"MONDO:0013154":null,"MONDO:0013159":null,"MONDO:0013160":null,"MONDO:0013162":null,"MONDO:0014140":null,"MONDO:0014141":null,"MONDO:0014142":null},"xrefs":{"Monarch":{"xref_id":"0017741"}}}


id: MONDO:0000201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thyroid cancer, nonmedullary (obsolete MONDO:0000201)","termid":"MONDO:0000201","xrefs":{"Monarch":{"xref_id":"0000201"}}}


id: PBO:0058997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLX pseudogene 1","termid":"PBO:0058997"}


id: MONDO:0016934
data:
  {"annotated_genes":["SJAG_01286"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011402"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal duplication","termid":"MONDO:0000762"},{"relation_name":"is_a","term_name":"chromosome 16 disorder","termid":"MONDO:0700023"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01286":null},"genotype_count":0,"is_obsolete":false,"name":"partial duplication of chromosome 16","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:20854","Orphanet:262672","MEDGEN:1379206","SCTID:726355001","UMLS:C4518504"],"synonyms":[{"name":"partial duplication of chromosome type 16","type":"exact"},{"name":"partial trisomy of chromosome 16","type":"exact"}],"termid":"MONDO:0016934","terms_by_termid":{"MONDO:0011402":null},"xrefs":{"Monarch":{"xref_id":"0016934"}}}


id: GO:0008319
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete prenyl protein specific endopeptidase activity (obsolete GO:0008319)","synonyms":[{"name":"prenyl protein specific endopeptidase activity","type":"exact"}],"termid":"GO:0008319"}


id: PBO:0044380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYP1B1 antisense RNA 1","termid":"PBO:0044380"}


id: GO:0014855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of striated muscle cells, resulting in the expansion of a cell population. Striated muscles contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle.","definition_xrefs":["GOC:mtg_muscle","GOC:ef","CL:0000737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell proliferation","termid":"GO:0033002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle cell proliferation","termid":"GO:0014855"}


id: MONDO:1011182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteopetrosis that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteopetrosis, non-human animal","termid":"MONDO:1010300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteopetrosis, rabbit","secondary_identifiers":["OMIA:000755-9986"],"termid":"MONDO:1011182","xrefs":{"Monarch":{"xref_id":"1011182"}}}


id: PBO:0076850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis associated actin remodelling kinase 2","termid":"PBO:0076850"}


id: PBO:0057874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3180-3","termid":"PBO:0057874"}


id: PBO:0026824
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_sodium_export","termid":"PBO:0026824"}


id: MONDO:0020422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aortopulmonary coronary arterial course is a rare coronary artery congenital malformation characterized by anomalous origin of the coronary artery from the contralateral sinus of Valsalva with course between the aorta and the pulmonary artery. The anomaly is associated with increased risk of sudden cardiac death, especially during exercise.","definition_xrefs":["Orphanet:99086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coronary artery congenital malformation","termid":"MONDO:0015203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aortopulmonary coronary arterial course","secondary_identifiers":["MEDGEN:1668023","UMLS:C4757971"],"termid":"MONDO:0020422","xrefs":{"Monarch":{"xref_id":"0020422"}}}


id: FYPO:0007410
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more residues within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II is abnormal.","definition_xrefs":["GO:0070816","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphorylation","termid":"FYPO:0002677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"abnormal RNA polymerase II C-terminal domain phosphorylation","synonyms":[{"name":"abnormal phosphorylation of RNA polymerase II C-terminal domain","type":"exact"}],"termid":"FYPO:0007410"}


id: PBO:0054809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2222","termid":"PBO:0054809"}


id: GO:1901048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by an extracellular ligand binding to a transforming growth factor beta receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription, that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size.","definition_xrefs":["GOC:TermGenie","GOC:kmv","PMID:9847239"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor signaling pathway involved in regulation of multicellular organism growth (obsolete GO:1901048)","synonyms":[{"name":"TGF-beta receptor signaling pathway of regulation of body growth","type":"exact"},{"name":"TGF-beta receptor signaling pathway of regulation of body size","type":"exact"},{"name":"TGF-beta receptor signaling pathway of regulation of multicellular organism growth","type":"exact"},{"name":"TGF-beta receptor signalling pathway of regulation of body growth","type":"exact"},{"name":"TGF-beta receptor signalling pathway of regulation of body size","type":"exact"},{"name":"TGF-beta receptor signalling pathway of regulation of multicellular organism growth","type":"exact"},{"name":"TGFbeta receptor signaling pathway of regulation of body growth","type":"exact"},{"name":"TGFbeta receptor signaling pathway of regulation of body size","type":"exact"},{"name":"TGFbeta receptor signaling pathway of regulation of multicellular organism growth","type":"exact"},{"name":"TGFbeta receptor signalling pathway of regulation of body growth","type":"exact"},{"name":"TGFbeta receptor signalling pathway of regulation of body size","type":"exact"},{"name":"TGFbeta receptor signalling pathway of regulation of multicellular organism growth","type":"exact"},{"name":"transforming growth factor beta receptor signaling pathway of regulation of body growth","type":"exact"},{"name":"transforming growth factor beta receptor signaling pathway of regulation of body size","type":"exact"},{"name":"transforming growth factor beta receptor signaling pathway of regulation of multicellular organism growth","type":"exact"},{"name":"transforming growth factor beta receptor signalling pathway of regulation of body growth","type":"exact"},{"name":"transforming growth factor beta receptor signalling pathway of regulation of body size","type":"exact"},{"name":"transforming growth factor beta receptor signalling pathway of regulation of multicellular organism growth","type":"exact"}],"termid":"GO:1901048"}


id: MOD:01315
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 4x(2)H-labeled N6-succinyl-L-lysine.","definition_xrefs":["PubMed:11857757","PubMed:15189151","PubMed:11344537","PubMed:12175151","Unimod:65#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-succinyl-L-lysine","termid":"MOD:01819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"4x(2)H labeled N6-succinyl-L-lysine","synonyms":[{"name":"Succinic anhydride labeling reagent, heavy form (+4amu, 4H2), N-term & K","type":"related"},{"name":"Succinyl:2H(4)","type":"related"}],"termid":"MOD:01315"}


id: PBO:0073100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit D pseudogene 4","termid":"PBO:0073100"}


id: GO:0048868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a pollen tube over time, from its initial formation to a mature structure.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"pollination","termid":"GO:0009856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen tube development","termid":"GO:0048868"}


id: GO:0008880
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucuronate = D-fructuronate. Also converts D-galacturonate to D-tagaturonate.","definition_xrefs":["EC:5.3.1.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glucuronate isomerase activity","secondary_identifiers":["MetaCyc:GLUCUROISOM-RXN"],"synonyms":[{"name":"D-glucuronate aldose-ketose-isomerase activity","type":"related"},{"name":"D-glucuronate isomerase activity","type":"related"},{"name":"D-glucuronate ketol-isomerase activity","type":"related"},{"name":"uronate isomerase activity","type":"related"},{"name":"uronic acid isomerase activity","type":"related"},{"name":"uronic isomerase activity","type":"related"}],"termid":"GO:0008880"}


id: PBO:0073788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 5 member 8","termid":"PBO:0073788"}


id: GO:0006413
data:
  {"annotated_genes":["SJAG_00662","SJAG_02072","SJAG_02628","SJAG_02995","SJAG_01201","SJAG_02026","SJAG_05003","SJAG_02201","SJAG_00912","SJAG_00786","SJAG_02061","SJAG_00892","SJAG_00105","SJAG_01942","SJAG_02376","SJAG_03629","SJAG_04383","SJAG_03433","SJAG_04929","SJAG_02263","SJAG_03794","SJAG_04981","SJAG_01436","SJAG_01659","SJAG_04900","SJAG_01249","SJAG_00169","SJAG_02638","SJAG_01368","SJAG_03678","SJAG_00466","SJAG_02390","SJAG_03534","SJAG_04891","SJAG_03732","SJAG_01576","SJAG_03223","SJAG_03658","SJAG_01954","SJAG_04093","SJAG_04635","SJAG_01643","SJAG_01650","SJAG_02164","SJAG_01517","SJAG_00887","SJAG_03869","SJAG_01117","SJAG_01487","SJAG_04959","SJAG_03996","SJAG_03788","SJAG_04873","SJAG_02856","SJAG_02307","SJAG_00690","SJAG_03147","SJAG_04772","SJAG_02592","SJAG_04744","SJAG_02471","SJAG_00507","SJAG_03472"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66694,92252,118079],"is_not":false,"summary":null,"term":"GO:0006413"},{"annotations":[104254,115111,110104,118008,92250,97303,110188,89418,89379,103030,100000,106506,87001,96152,102897,106800,89838,113469,97881,102715,96721,97282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002183"},{"annotations":[96342,97283,98430,99599,104814,110189,95355,105100,94274,110831,97222,89419],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001732"},{"annotations":[96072,95572,103558,104911,117556,109033,71202,105107,108257],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001731"},{"annotations":[93138,105081,102130,106768,100798,107826,99954,90480,98205,101409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070124"},{"annotations":[111646,109166,90792],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1904689"},{"annotations":[115112,92293,98835,91997,93852,109167],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1990625"},{"annotations":[101410,99955],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0070134"},{"annotations":[100506],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0045948"},{"annotations":[103464,94707,102830],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1990611"},{"annotations":[102598],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1990983"},{"annotations":[103559,104815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002188"}]},"cv_name":"biological_process","definition":"The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA or circRNA, and an initiation complex that contains the first aminoacyl-tRNA.","definition_xrefs":["ISBN:019879276X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"},{"relation_name":"part_of","term_name":"translation","termid":"GO:0006412"}],"gene_count":63,"genes_by_uniquename":{"SJAG_00105":null,"SJAG_00169":null,"SJAG_00466":null,"SJAG_00507":null,"SJAG_00662":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_00887":null,"SJAG_00892":null,"SJAG_00912":null,"SJAG_01117":null,"SJAG_01201":null,"SJAG_01249":null,"SJAG_01368":null,"SJAG_01436":null,"SJAG_01487":null,"SJAG_01517":null,"SJAG_01576":null,"SJAG_01643":null,"SJAG_01650":null,"SJAG_01659":null,"SJAG_01942":null,"SJAG_01954":null,"SJAG_02026":null,"SJAG_02061":null,"SJAG_02072":null,"SJAG_02164":null,"SJAG_02201":null,"SJAG_02263":null,"SJAG_02307":null,"SJAG_02376":null,"SJAG_02390":null,"SJAG_02471":null,"SJAG_02592":null,"SJAG_02628":null,"SJAG_02638":null,"SJAG_02856":null,"SJAG_02995":null,"SJAG_03147":null,"SJAG_03223":null,"SJAG_03433":null,"SJAG_03472":null,"SJAG_03534":null,"SJAG_03629":null,"SJAG_03658":null,"SJAG_03678":null,"SJAG_03732":null,"SJAG_03788":null,"SJAG_03794":null,"SJAG_03869":null,"SJAG_03996":null,"SJAG_04093":null,"SJAG_04383":null,"SJAG_04635":null,"SJAG_04744":null,"SJAG_04772":null,"SJAG_04873":null,"SJAG_04891":null,"SJAG_04900":null,"SJAG_04929":null,"SJAG_04959":null,"SJAG_04981":null,"SJAG_05003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"translational initiation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["Reactome:R-HSA-72613","GO:0006440","GO:0006454"],"synonyms":[{"name":"biopolymerisation","type":"broad"},{"name":"biopolymerization","type":"broad"},{"name":"protein synthesis initiation","type":"broad"},{"name":"translation initiation","type":"exact"}],"termid":"GO:0006413","terms_by_termid":{"GO:0001731":null,"GO:0001732":null,"GO:0002183":null,"GO:0002188":null,"GO:0006413":null,"GO:0045948":null,"GO:0070124":null,"GO:0070134":null,"GO:1904689":null,"GO:1990611":null,"GO:1990625":null,"GO:1990983":null}}


id: MONDO:0007699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune disorder caused by the production of autoantibodies against thyroid tissue. There is progressive destruction of the thyroid follicles leading to hypothyroidism.","definition_xrefs":["NCIT:C27191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"autoimmune thyroid disease","termid":"MONDO:0005623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Hashimoto thyroiditis","secondary_identifiers":["OMIM:140300","icd11.foundation:972507934","MESH:D050031","Orphanet:855","EFO:0003779","UMLS:C0677607","Wikipedia:Hashimoto's_thyroiditis","DOID:7188","ICD10CM:E06.3","ICD9:245.2","NANDO:2200335","MEDGEN:151769"],"synonyms":[{"name":"HT","type":"related"},{"name":"Hashimoto disease","type":"exact"},{"name":"Hashimoto hypothyroidism","type":"exact"},{"name":"Hashimoto struma","type":"related"},{"name":"Hashimoto syndrome","type":"related"},{"name":"Hashimoto thyroiditides","type":"related"},{"name":"Hashimoto thyroiditis","type":"exact"},{"name":"Hashimoto's disease","type":"exact"},{"name":"Hashimoto's struma","type":"related"},{"name":"Hashimoto's syndrome","type":"exact"},{"name":"Hashimoto's syndromes","type":"related"},{"name":"Hashimoto's thyroiditis","type":"exact"},{"name":"Hashimotos disease","type":"related"},{"name":"Hashimotos syndrome","type":"related"},{"name":"Ht","type":"related"},{"name":"autoimmune thyroiditis","type":"related"},{"name":"chronic lymphocytic thyroiditides","type":"related"},{"name":"chronic lymphocytic thyroiditis","type":"exact"},{"name":"disease, Hashimoto","type":"related"},{"name":"disease, Hashimoto's","type":"related"},{"name":"hypothyroidism, autoimmune","type":"related"},{"name":"hypothyroidism, autoimmune thyroid autoantibodies, included","type":"related"},{"name":"lymphocytic thyroiditides, chronic","type":"related"},{"name":"lymphocytic thyroiditis","type":"broad"},{"name":"lymphocytic thyroiditis, chronic","type":"related"},{"name":"syndrome, Hashimoto's","type":"related"},{"name":"syndromes, Hashimoto's","type":"related"},{"name":"thyroid autoantibodies","type":"related"},{"name":"thyroiditides, Hashimoto","type":"related"},{"name":"thyroiditides, chronic lymphocytic","type":"related"},{"name":"thyroiditis, Hashimoto","type":"related"},{"name":"thyroiditis, chronic lymphocytic","type":"related"}],"termid":"MONDO:0007699","xrefs":{"Monarch":{"xref_id":"0007699"}}}


id: GO:0090554
data:
  {"annotated_genes":["SJAG_02897","SJAG_00669","SJAG_01731"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93915,97425,99691],"is_not":false,"summary":null,"term":"GO:0090554"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of phosphatidylcholine from the cytosolic to the exoplasmic leaflet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["PMID:16452632","GOC:ab","RHEA:38583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine transporter activity","termid":"GO:0008525"},{"relation_name":"is_a","term_name":"floppase activity","termid":"GO:0140328"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00669":null,"SJAG_01731":null,"SJAG_02897":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0140303"],"is_obsolete":false,"name":"phosphatidylcholine floppase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP-dependent phosphatidylcholine transporter activity","type":"broad"},{"name":"ATPase-coupled phosphatidylcholine transporter activity","type":"broad"},{"name":"phosphatidylcholine floppase activity (cytosolic to exoplasmic leaflet)","type":"exact"},{"name":"phosphatidylcholine-translocating ATPase activity","type":"broad"}],"termid":"GO:0090554","terms_by_termid":{"GO:0090554":null}}


id: PBO:0045903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease/exonuclease/phosphatase family domain containing 1","termid":"PBO:0045903"}


id: PBO:0065397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha 2 pseudogene 3","termid":"PBO:0065397"}


id: MONDO:1010675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anotia that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anotia, non-human animal","termid":"MONDO:1010090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anotia, cattle","secondary_identifiers":["OMIA:001411-9913"],"termid":"MONDO:1010675","xrefs":{"Monarch":{"xref_id":"1010675"}}}


id: PBO:0077517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 232","termid":"PBO:0077517"}


id: PBO:0046555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 9, envelope","termid":"PBO:0046555"}


id: GO:0004528
data:
  {"annotated_genes":["SJAG_02298","SJAG_03994"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102701,109452],"is_not":false,"summary":null,"term":"GO:0004528"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential hydrolytic removal of 5'-nucleotides from the 3'-hydroxy termini of 3'-hydroxy-terminated oligonucleotides.","definition_xrefs":["EC:3.1.4.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exonuclease activity","termid":"GO:0004527"},{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02298":null,"SJAG_03994":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0004527","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"phosphodiesterase I activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.1.4.1-RXN"],"synonyms":[{"name":"5' nucleotide phosphodiesterase/alkaline phosphodiesterase I activity","type":"related"},{"name":"5'-NPDase activity","type":"related"},{"name":"5'-PDE activity","type":"related"},{"name":"5'-PDase activity","type":"related"},{"name":"5'-exonuclease activity","type":"related"},{"name":"5'-nucleotide phosphodiesterase activity","type":"related"},{"name":"5'-phosphodiesterase activity","type":"related"},{"name":"5'NPDE activity","type":"related"},{"name":"PDE I activity","type":"related"},{"name":"alkaline phosphodiesterase activity","type":"related"},{"name":"exonuclease I activity","type":"related"},{"name":"nucleotide pyrophosphatase/phosphodiesterase I activity","type":"related"},{"name":"oligonucleate 5'-nucleotidohydrolase activity","type":"related"},{"name":"orthophosphoric diester phosphohydrolase activity","type":"related"},{"name":"phosphodiesterase activity","type":"broad"}],"termid":"GO:0004528","terms_by_termid":{"GO:0004528":null}}


id: PBO:0046608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 10","termid":"PBO:0046608"}


id: MOD:00790
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod - isotopic label ICPL method - The paper describes an H/D labeling strategy whereas the commercial product follows a C/13C labeling strategy. The digest is typically applied AFTER ICPL_light/heavy labeling, only Protein N-term labeling and Lys-specific labeling is applied.","definition_xrefs":["PubMed:15602776","URL:http://www.serva.de/products/sheets/39230-E.pdf","Unimod:365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, light form","synonyms":[{"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, light form","type":"related"},{"name":"ICPL","type":"related"}],"termid":"MOD:00790"}


id: PATO:0001775
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's location of features or characteristics along the dorsal-ventral axis.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positional polarity","termid":"PATO:0001769"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsal-ventral polarity","termid":"PATO:0001775"}


id: GO:1904239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of VCP-NPL4-UFD1 AAA ATPase complex assembly.","definition_xrefs":["GOC:PARL","GOC:bf","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"VCP-NPL4-UFD1 AAA ATPase complex assembly","termid":"GO:1904210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","synonyms":[{"name":"regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"regulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"regulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"regulation of p97-Ufd1-Npl4 complex formation","type":"exact"}],"termid":"GO:1904239"}


id: PBO:0081949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc and ring finger 2 pseudogene 3","termid":"PBO:0081949"}


id: MONDO:0019524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of Bartter syndrome characterized by maternal polyhydramnios, premature delivery, salt loss, polyuria and sensorineural deafness, associated with hypokalemic and hypochloremic metabolic alkalosis, increased levels of plasma renin and aldosterone, and low to normal blood pressure. Urinary calcium excretion rates are variable, and nephrocalcinosis is typically absent.","definition_xrefs":["Orphanet:89938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bartter syndrome","termid":"MONDO:0015231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Bartter syndrome type 4","secondary_identifiers":["MEDGEN:824706","UMLS:C3838860","SCTID:700112007","GARD:10508","icd11.foundation:959024909"],"synonyms":[{"name":"Bartter syndrome type 4","type":"exact"},{"name":"Bartter syndrome type IV","type":"exact"},{"name":"Bartter syndrome with sensorineural deafness","type":"exact"}],"termid":"MONDO:0019524","xrefs":{"Monarch":{"xref_id":"0019524"}}}


id: FYPO:0006775
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-4-phosphate measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered cellular phosphatidylinositol-4-phosphate level","termid":"FYPO:0001015"},{"relation_name":"is_a","term_name":"decreased cellular phosphoinositide level","termid":"FYPO:0005588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular phosphatidylinositol-4-phosphate level","synonyms":[{"name":"decreased PI-4-P accumulation","type":"related"},{"name":"decreased cellular PI(4)P level","type":"exact"},{"name":"decreased cellular PI-4-P level","type":"exact"},{"name":"decreased cellular phosphatidylinositol-4-phosphate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phosphatidylinositol-4-phosphate level during vegetative growth","type":"exact"},{"name":"reduced cellular phosphatidylinositol-4-phosphate level","type":"exact"}],"termid":"FYPO:0006775"}


id: MONDO:1012197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ocular squamous cell carcinoma, non-human animal","termid":"MONDO:1011812"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ocular squamous cell carcinoma, cattle","secondary_identifiers":["OMIA:000735-9913"],"termid":"MONDO:1012197","xrefs":{"Monarch":{"xref_id":"1012197"}}}


id: GO:0048459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the floral whorl. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["PO:0025023","GOC:jid","GOC:PO_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"floral whorl morphogenesis","termid":"GO:0048457"},{"relation_name":"part_of","term_name":"flower structural organization","termid":"GO:0048461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floral whorl structural organization","secondary_identifiers":["GO:0048416"],"synonyms":[{"name":"floral whorl structural organisation","type":"exact"}],"termid":"GO:0048459"}


id: PBO:0041204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BVES antisense RNA 1","termid":"PBO:0041204"}


id: GO:1903596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gap junction assembly.","definition_xrefs":["PMID:25017399","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie","GOC:rl","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell junction assembly","termid":"GO:1901888"},{"relation_name":"regulates","term_name":"gap junction assembly","termid":"GO:0016264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of gap junction assembly","termid":"GO:1903596"}


id: PBO:0046166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELF3 antisense RNA 1","termid":"PBO:0046166"}


id: GO:0098504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any 3' DNA dephosphorylation that is involved in the process of DNA repair.","definition_xrefs":["PMID:11729194","GOC:DOS"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA 3' dephosphorylation involved in DNA repair (obsolete GO:0098504)","termid":"GO:0098504"}


id: MONDO:0016771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Annular atrophic lichen planus (LP) is a rare variant of cutaneous lichen planus characterized by both annular and atrophic LP features in the same lesion.","definition_xrefs":["Orphanet:254411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lichen planus","termid":"MONDO:0006572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"annular atrophic lichen planus","secondary_identifiers":["GARD:12676","UMLS:C4304037","MEDGEN:929706","SCTID:720493003"],"synonyms":[{"name":"annular atrophic LP","type":"exact"}],"termid":"MONDO:0016771","xrefs":{"Monarch":{"xref_id":"0016771"}}}


id: MONDO:0012145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any age-related macular degeneration in which the cause of the disease is a mutation in the FBLN5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age-related macular degeneration","termid":"MONDO:0005150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"macular degeneration, age-related, 3","secondary_identifiers":["MESH:C563838","MEDGEN:373276","OMIM:608895","UMLS:C1837187"],"synonyms":[{"name":"ARMD3","type":"related"},{"name":"FBLN5 age-related macular degeneration","type":"exact"},{"name":"HNARMD","type":"related"},{"name":"age-related macular degeneration caused by mutation in FBLN5","type":"exact"},{"name":"macular Degeneration, age-related, type 3","type":"exact"},{"name":"macular degeneration, age-related, 3","type":"exact"},{"name":"neuropathy, hereditary, with or without age-related macular Degeneration","type":"related"},{"name":"neuropathy, hereditary, with or without age-related macular degeneration","type":"related"}],"termid":"MONDO:0012145","xrefs":{"Monarch":{"xref_id":"0012145"}}}


id: FYPO:0003205
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A septation phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a primary septum that is thinner than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased septum thickness","termid":"FYPO:0006900"},{"relation_name":"output_of","term_name":"abnormal primary cell septum biogenesis","termid":"FYPO:0003890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0000002","FYPO:0000032","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased primary cell septum thickness","synonyms":[{"name":"decreased primary cell septum thickness during mitotic cell cycle","type":"related"},{"name":"decreased primary cell septum thickness during vegetative growth","type":"exact"},{"name":"decreased primary septum thickness","type":"exact"},{"name":"reduced primary cell septum thickness","type":"exact"},{"name":"thin primary septum","type":"exact"}],"termid":"FYPO:0003205"}


id: PBO:0079615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 K","termid":"PBO:0079615"}


id: MONDO:0008637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bifid uvula is a fissure type embryopathy affecting the uvula at the back of the soft palate.","definition_xrefs":["Orphanet:99771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate","termid":"MONDO:0016064"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bifid uvula","secondary_identifiers":["GARD:19687","OMIM:192100","SCTID:18910001","icd11.foundation:684398038","MEDGEN:1646931","UMLS:C4551488"],"synonyms":[{"name":"bifidity of the uvula","type":"exact"},{"name":"uvula, bifid","type":"related"},{"name":"uvula, cleft","type":"related"},{"name":"uvular cleft","type":"exact"}],"termid":"MONDO:0008637","xrefs":{"Monarch":{"xref_id":"0008637"}}}


id: PBO:0088997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNAi-mediated silencing protein, human NRDE2 ortholog Nrl1","termid":"PBO:0088997"}


id: GO:0050866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cell activation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cell activation","termid":"GO:0050865"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"cell activation","termid":"GO:0001775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell activation","synonyms":[{"name":"down regulation of cell activation","type":"exact"},{"name":"down-regulation of cell activation","type":"exact"},{"name":"downregulation of cell activation","type":"exact"},{"name":"inhibition of cell activation","type":"narrow"}],"termid":"GO:0050866"}


id: GO:0102159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucuronate + baicalein = H+ + UDP + baicalin.","definition_xrefs":["RHEA:28314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"baicalein 7-O-glucuronosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11755"],"termid":"GO:0102159"}


id: PBO:0038304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase chadoprop types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"db_date_version","termid":"PBO:0038304"}


id: PBO:0058913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12131","termid":"PBO:0058913"}


id: GO:0038027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by apolipoprotein A-I binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","PMID:16443932","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"apolipoprotein A-I-mediated signaling pathway","synonyms":[{"name":"apolipoprotein A-I-mediated signalling pathway","type":"exact"}],"termid":"GO:0038027"}


id: PBO:0038500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 9","termid":"PBO:0038500"}


id: PBO:0062122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 50 pseudogene","termid":"PBO:0062122"}


id: PBO:0027680
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_transcription_during_vegetative_growth","termid":"PBO:0027680"}


id: GO:0061657
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Isoenergetic transfer of UFM1 from one protein to another via the reaction X-UFM1 + Y = Y-UFM1 + X, where both the X-UFM1 and Y-UFM1 linkages are thioester bonds between the C-terminal amino acid of UFM1 and a sulfhydryl side group of a cysteine residue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein conjugating enzyme activity","termid":"GO:0061650"},{"relation_name":"is_a","term_name":"UFM1 transferase activity","termid":"GO:0071568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0003824","GO:0016740","GO:0016746","GO:0019787"],"is_obsolete":false,"name":"UFM1 conjugating enzyme activity","synonyms":[{"name":"E2","type":"broad"}],"termid":"GO:0061657"}


id: GO:0005301
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete valine/tyrosine/tryptophan permease activity (obsolete GO:0005301)","synonyms":[{"name":"hydrogen/valine-tyrosine-tryptophan transporter","type":"exact"},{"name":"valine/tyrosine/tryptophan permease activity","type":"exact"}],"termid":"GO:0005301"}


id: PBO:0044222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTXN2 antisense RNA 1","termid":"PBO:0044222"}


id: PR:Q1K9B6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pex22 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q1K9B6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C19D5.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19D5.02c","synonyms":[{"name":"Spom972h-pex22","type":"exact"}],"termid":"PR:Q1K9B6"}


id: PATO:0001128
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001128 absolute work value (obsolete PATO:0001128)","termid":"PATO:0001128"}


id: PBO:0079927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"URGCP-MRPS24 readthrough","termid":"PBO:0079927"}


id: PBO:0005841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate kinase Tmp1","termid":"PBO:0005841"}


id: GO:0032672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-3 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-3 production","termid":"GO:0032632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-3 production","secondary_identifiers":["GO:0045399"],"synonyms":[{"name":"regulation of IL-3 production","type":"exact"},{"name":"regulation of interleukin-3 biosynthetic process","type":"narrow"}],"termid":"GO:0032672"}


id: GO:0046949
data:
  {"annotated_genes":["SJAG_04007"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a fatty-acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA metabolic process","termid":"GO:0035337"},{"relation_name":"is_a","term_name":"acyl-CoA biosynthetic process","termid":"GO:0071616"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0006790","GO:0055086","GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"fatty-acyl-CoA biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-75105"],"synonyms":[{"name":"fatty acyl CoA biosynthetic process","type":"exact"},{"name":"fatty-acyl-CoA anabolism","type":"exact"},{"name":"fatty-acyl-CoA biosynthesis","type":"exact"},{"name":"fatty-acyl-CoA formation","type":"exact"},{"name":"fatty-acyl-CoA synthesis","type":"exact"}],"termid":"GO:0046949","terms_by_termid":{"GO:0035338":null}}


id: PBO:0028076
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete_mitotic_sister_chromatid_segregation,_with_unseparated_DNA","termid":"PBO:0028076"}


id: MONDO:0018349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"MAN1B1-CDG is a form of congenital disorders of N-linked glycosylation characterized by intellectual disability, delayed motor development, hypotonia and truncal obesity. Additional features include slight facial dysmorphism (hypertelorism, downslanting palpebral fissures, large, low-set ears, hypoplastic nasolabial fold, thin upper lip), hypermobility of the joints and skin laxity. The disease is caused by mutations in the gene MAN1B1 (9q34.3).","definition_xrefs":["Orphanet:397941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"MAN1B1-congenital disorder of glycosylation","secondary_identifiers":["MEDGEN:1375785","SCTID:733450008","UMLS:C4518783","GARD:12417"],"synonyms":[{"name":"MAN1B1-CDG","type":"exact"},{"name":"MAN1B1-congenital disorder of glycosylation","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type II due to MAN1B1 deficiency","type":"exact"},{"name":"congenital disorder of glycosylation type 2 due to MAN1B1 deficiency","type":"exact"},{"name":"congenital disorder of glycosylation type II due to MAN1B1 deficiency","type":"exact"},{"name":"intellectual disability-truncal obesity syndrome","type":"exact"}],"termid":"MONDO:0018349","xrefs":{"Monarch":{"xref_id":"0018349"}}}


id: MONDO:0012356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glomerulocystic kidney disease with hyperuricemia and isosthenuria (obsolete MONDO:0012356)","termid":"MONDO:0012356","xrefs":{"Monarch":{"xref_id":"0012356"}}}


id: MONDO:0014480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46,XY complete gonadal dysgenesis","termid":"MONDO:0010765"},{"relation_name":"is_a","term_name":"46,XY partial gonadal dysgenesis","termid":"MONDO:0016674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"46,XY sex reversal 9","secondary_identifiers":["GARD:18361","UMLS:C4015129","MEDGEN:863566","OMIM:616067","DOID:0111770"],"synonyms":[{"name":"46,XY SEX reversal 9","type":"related"},{"name":"46,XY Sex reversal type 9","type":"exact"},{"name":"46,XY Sex reversal, Zfpm2-related","type":"related"},{"name":"46,XY sex reversal 9","type":"exact"},{"name":"46XY sex reversal 9","type":"exact"},{"name":"SRXY9","type":"related"}],"termid":"MONDO:0014480","xrefs":{"Monarch":{"xref_id":"0014480"}}}


id: PBO:0049224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor kinase 6","termid":"PBO:0049224"}


id: PR:G2TRT3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tam14 gene.","definition_xrefs":["UniProtKB:G2TRT3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tam14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.20","synonyms":[{"name":"Spom972h-tam14","type":"exact"},{"name":"transcripts altered in meiosis protein 14 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRT3"}


id: PBO:0069015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 259, pseudogene","termid":"PBO:0069015"}


id: PBO:0047516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasciculation and elongation protein zeta 1","termid":"PBO:0047516"}


id: PBO:0079118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ts translation elongation factor, mitochondrial","termid":"PBO:0079118"}


id: PBO:0053656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 709","termid":"PBO:0053656"}


id: MONDO:0014734
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"idiopathic generalized epilepsy","termid":"MONDO:0005579"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, idiopathic generalized, susceptibility to, 14","secondary_identifiers":["OMIM:616685","DOID:0111315","MEDGEN:903934","UMLS:C4225245"],"synonyms":[{"name":"EIG14","type":"exact"},{"name":"epilepsy, idiopathic generalized, susceptibility to, 14","type":"exact"},{"name":"epilepsy, idiopathic generalized, susceptibility to, 14; EIG14","type":"exact"},{"name":"epilepsy, idiopathic generalized, susceptibility to, type 14","type":"exact"},{"name":"susceptibility to idiopathic generalised epilepsy 14","type":"exact"},{"name":"susceptibility to idiopathic generalized epilepsy 14","type":"exact"}],"termid":"MONDO:0014734","xrefs":{"Monarch":{"xref_id":"0014734"}}}


id: PBO:0038770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 8","termid":"PBO:0038770"}


id: PBO:0003658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A variant H2A.Z, Pht1","termid":"PBO:0003658"}


id: PBO:0060876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear envelope integral membrane protein 1","termid":"PBO:0060876"}


id: SO:0000550
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome structural variation whereby either a chromosome exists in addition to the normal chromosome complement or is lacking.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_structure_variation","termid":"SO:1000183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aneuploid_chromosome","synonyms":[{"name":"aneuploid chromosome","type":"exact"}],"termid":"SO:0000550"}


id: GO:1900226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of NLRP3 inflammasome complex assembly.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of NLRP3 inflammasome complex assembly","termid":"GO:1900225"},{"relation_name":"negatively_regulates","term_name":"NLRP3 inflammasome complex assembly","termid":"GO:0044546"},{"relation_name":"part_of","term_name":"negative regulation of inflammasome-mediated signaling pathway","termid":"GO:0141086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"negative regulation of NLRP3 inflammasome complex assembly","synonyms":[{"name":"down regulation of NALP3 inflammasome complex assembly","type":"exact"},{"name":"down regulation of NLRP3 inflammasome activation","type":"related"},{"name":"down regulation of NLRP3 inflammasome complex assembly","type":"exact"},{"name":"down-regulation of NALP3 inflammasome complex assembly","type":"exact"},{"name":"down-regulation of NLRP3 inflammasome activation","type":"related"},{"name":"down-regulation of NLRP3 inflammasome complex assembly","type":"exact"},{"name":"downregulation of NALP3 inflammasome complex assembly","type":"exact"},{"name":"downregulation of NLRP3 inflammasome activation","type":"related"},{"name":"downregulation of NLRP3 inflammasome complex assembly","type":"exact"},{"name":"inhibition of NALP3 inflammasome complex assembly","type":"exact"},{"name":"inhibition of NLRP3 inflammasome activation","type":"related"},{"name":"inhibition of NLRP3 inflammasome complex assembly","type":"narrow"},{"name":"negative regulation of NALP3 inflammasome complex assembly","type":"exact"},{"name":"negative regulation of NLRP3 inflammasome activation","type":"related"}],"termid":"GO:1900226"}


id: PBO:0082617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of 90S preribosomes; involved in early cleavages of the 35S pre-rRNA and in production of the 40S ribosomal subunit","termid":"PBO:0082617"}


id: MONDO:0009059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine Peptiduria","secondary_identifiers":["MESH:C565659","MEDGEN:346587","OMIM:219550","UMLS:C1857438"],"synonyms":[{"name":"cysteine Peptiduria","type":"exact"}],"termid":"MONDO:0009059","xrefs":{"Monarch":{"xref_id":"0009059"}}}


id: PBO:0089261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and cytoplasmic alanine-tRNA ligase Ala1","termid":"PBO:0089261"}


id: GO:0120108
data:
  {"annotated_genes":["SJAG_04410"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115182],"is_not":false,"summary":null,"term":"GO:0120108"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (DNA)-3'-diphospho-5'-guanosine + H2O = (DNA)-3'-phosphate + GMP.","definition_xrefs":["PMID:26007660","RHEA:52140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"DNA-3'-diphospho-5'-guanosine diphosphatase","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.6.1.72"],"synonyms":[{"name":"DNA-3'pp5'G guanylate hydrolase","type":"exact"}],"termid":"GO:0120108","terms_by_termid":{"GO:0120108":null}}


id: MONDO:0025708
data:
  {"annotated_genes":["SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86032,86033],"is_not":false,"summary":null,"term":"MONDO:0025708"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"megacystis-microcolon-intestinal hypoperistalsis syndrome","termid":"MONDO:0025986"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"megacystis-microcolon-intestinal hypoperistalsis syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1788773","OMIM:619351","GARD:16447","UMLS:C5543476"],"synonyms":[{"name":"MMIHS2","type":"exact"}],"termid":"MONDO:0025708","terms_by_termid":{"MONDO:0025708":null},"xrefs":{"Monarch":{"xref_id":"0025708"}}}


id: FYPO:0006701
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of UMP measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular pentose phosphate level","termid":"FYPO:0006705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular UMP level","synonyms":[{"name":"decreased cellular UMP level during mitotic cell cycle","type":"related"},{"name":"decreased cellular UMP level during vegetative growth","type":"exact"},{"name":"reduced cellular UMP level","type":"exact"}],"termid":"FYPO:0006701"}


id: PBO:0110498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAT1 regulated ILF2 complex interacting lncRNA","termid":"PBO:0110498"}


id: SO:0000986
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The attribute of whether a nucleotide polymer is linear or circular.","direct_ancestors":[{"relation_name":"is_a","term_name":"polymer_attribute","termid":"SO:0000443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"topology_attribute","synonyms":[{"name":"topology attribute","type":"exact"}],"termid":"SO:0000986"}


id: PBO:0048413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA2 antisense RNA 1","termid":"PBO:0048413"}


id: GO:0032504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The biological process in which new individuals are produced by one or two multicellular organisms. The new individuals inherit some proportion of their genetic material from the parent or parents.","definition_xrefs":["GOC:jid","GOC:isa_complete"],"gene_count":0,"genotype_count":0,"name":"obsolete multicellular organism reproduction (obsolete GO:0032504)","termid":"GO:0032504"}


id: MONDO:0001423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"substance-induced psychosis","termid":"MONDO:0004630"},{"relation_name":"is_a","term_name":"mental disorder","termid":"MONDO:0005084"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drug-induced mental disorder","secondary_identifiers":["MEDGEN:1843491","ICD9:292.8","ICD9:292.89","UMLS:C0154330","DOID:1203"],"termid":"MONDO:0001423","xrefs":{"Monarch":{"xref_id":"0001423"}}}


id: PBO:0066952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 254","termid":"PBO:0066952"}


id: GO:0002804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antifungal peptide production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antimicrobial peptide production","termid":"GO:0002225"},{"relation_name":"is_a","term_name":"regulation of antifungal peptide production","termid":"GO:0002788"},{"relation_name":"positively_regulates","term_name":"antifungal peptide production","termid":"GO:0002781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of antifungal peptide production","synonyms":[{"name":"activation of antifungal peptide production","type":"narrow"},{"name":"stimulation of antifungal peptide production","type":"narrow"},{"name":"up regulation of antifungal peptide production","type":"exact"},{"name":"up-regulation of antifungal peptide production","type":"exact"},{"name":"upregulation of antifungal peptide production","type":"exact"}],"termid":"GO:0002804"}


id: PBO:0085657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in modulation of Ime2p activity during meiosis; appears to act indirectly to promote Ime2p-mediated late meiotic functions; found in growing cells and degraded during sporulation","termid":"PBO:0085657"}


id: GO:0008227
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an extracellular amine and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:bf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled amine receptor activity","synonyms":[{"name":"G-protein coupled amine receptor activity","type":"exact"},{"name":"amine receptor activity, G-protein coupled","type":"exact"},{"name":"biogenic amine receptor","type":"narrow"}],"termid":"GO:0008227"}


id: PBO:0075842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU72 like 3","termid":"PBO:0075842"}


id: PBO:0001142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltranspeptidase Ggt1","termid":"PBO:0001142"}


id: MONDO:0042911
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schwartz-Cohen-addad-Lambert syndrome","secondary_identifiers":["MEDGEN:443962","UMLS:C2931036","MESH:C535835"],"synonyms":[{"name":"Schwartz Cohen-Addad Lambert syndrome","type":"related"},{"name":"congenital melanocytosis with myelomeningocele and hydrocephalus","type":"related"}],"termid":"MONDO:0042911","xrefs":{"Monarch":{"xref_id":"0042911"}}}


id: PBO:0083764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential light chain for Myo1p; light chain for Myo2p; stabilizes Myo2p by binding to the neck region; interacts with Myo1p, Iqg1p, and Myo2p to coordinate formation and contraction of the actomyosin ring with targeted membrane deposition","termid":"PBO:0083764"}


id: GO:0075055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of symbiont penetration peg formation for entry into host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"modulation of penetration peg formation","termid":"GO:0075054"},{"relation_name":"is_a","term_name":"positive regulation by symbiont of entry into host","termid":"GO:0075294"},{"relation_name":"positively_regulates","term_name":"penetration peg formation","termid":"GO:0075053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of penetration peg formation","secondary_identifiers":["GO:0075059"],"synonyms":[{"name":"positive regulation of symbiont penetration peg formation for entry into host","type":"narrow"},{"name":"positive regulation of symbiont penetration peg initiation","type":"narrow"}],"termid":"GO:0075055"}


id: PBO:0005892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase subunit 6 (predicted)","termid":"PBO:0005892"}


id: GO:1902675
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any ciliary basal body that is part of a left ventral flagellum found in Giardia species (trophozoite stage).","definition_xrefs":["GO_REF:0000064","GOC:giardia","ISBN:9780124260207","PMID:16607022","PMID:5961344","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary basal body","termid":"GO:0036064"},{"relation_name":"part_of","term_name":"left ventral flagellum","termid":"GO:0097558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"left ventral basal body","synonyms":[{"name":"cilial basal body of left ventral cilium","type":"exact"},{"name":"cilial basal body of left ventral flagellum","type":"exact"},{"name":"ciliary basal body of left ventral cilium","type":"exact"},{"name":"ciliary basal body of left ventral flagellum","type":"exact"},{"name":"cilium basal body of left ventral cilium","type":"exact"},{"name":"cilium basal body of left ventral flagellum","type":"exact"},{"name":"left ventral flagellum ciliary basal body","type":"exact"},{"name":"microtubule basal body of left ventral cilium","type":"exact"},{"name":"microtubule basal body of left ventral flagellum","type":"exact"}],"termid":"GO:1902675"}


id: PBO:0005186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidinol-phosphatase (predicted)","termid":"PBO:0005186"}


id: MONDO:0013358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Seckel syndrome in which the cause of the disease is a mutation in the CENPJ gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Seckel syndrome","termid":"MONDO:0019342"},{"relation_name":"is_a","term_name":"microcephaly 6 with or without short stature","termid":"MONDO:0700054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"Seckel syndrome 4","secondary_identifiers":["MEDGEN:854819","OMIM:613676","UMLS:C3888212","GARD:15687","DOID:0070010"],"synonyms":[{"name":"CENPJ Seckel syndrome","type":"exact"},{"name":"SCKL4","type":"exact"},{"name":"Seckel syndrome 4","type":"exact"},{"name":"Seckel syndrome caused by mutation in CENPJ","type":"exact"},{"name":"Seckel syndrome type 4","type":"exact"}],"termid":"MONDO:0013358","xrefs":{"Monarch":{"xref_id":"0013358"}}}


id: GO:1905164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phagosome maturation.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of phagosome maturation","termid":"GO:1905162"},{"relation_name":"positively_regulates","term_name":"phagosome maturation","termid":"GO:0090382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phagosome maturation","synonyms":[{"name":"activation of phagosome maturation","type":"narrow"},{"name":"up regulation of phagosome maturation","type":"exact"},{"name":"up-regulation of phagosome maturation","type":"exact"},{"name":"upregulation of phagosome maturation","type":"exact"}],"termid":"GO:1905164"}


id: FYPO:0003435
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ornithine carbamoyltransferase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal ornithine carbamoyltransferase activity","termid":"FYPO:0003433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000002","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"increased ornithine carbamoyltransferase activity","termid":"FYPO:0003435"}


id: GO:0160188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a sterol from one side of a membrane to the other according to the reaction: H+(out) + sterol(in) = H+(in) + sterol(out).","definition_xrefs":["PMID:31543266"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol:proton antiporter activity (obsolete GO:0160188)","termid":"GO:0160188"}


id: PBO:0082473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calpain-like cysteine protease; involved in proteolytic activation of Rim101p in response to alkaline pH; localizes to punctate structures in alkaline conditions and in vps4 mutant; has similarity to A. nidulans palB","termid":"PBO:0082473"}


id: MONDO:0800201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"androgenetic alopecia","termid":"MONDO:0005339"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"baldness, male pattern","secondary_identifiers":["MEDGEN:904995","UMLS:C4083212"],"synonyms":[{"name":"MPB","type":"exact"}],"termid":"MONDO:0800201","xrefs":{"Monarch":{"xref_id":"0800201"}}}


id: MOD:00439
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Covalent modification of a peptide or protein amino acid phosphorylated threonine with a secondary loss of a neutral trihydrogen phosphate molecular fragment.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"O-phospho-L-threonine","termid":"MOD:00047"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"},{"relation_name":"is_a","term_name":"phosphorylated residue with neutral loss of phosphate","termid":"MOD:01151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-phospho-L-threonine with neutral loss of phosphate","synonyms":[{"name":"dPhosOPhosThr","type":"exact"}],"termid":"MOD:00439"}


id: PBO:0071034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 36","termid":"PBO:0071034"}


id: MONDO:0800465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ectodermal dysplasia syndrome in which the cause of the disease is a variation in the CTSC gene. Variations in the CTSC gene can result in (1) Papillon-Lefevre syndrome (PLS) characterized by palmoplantar keratoderma, severe periodontitis affecting deciduous and permanent dentitions, and premature loss of dentition, (2) Haim-Munk syndrome (HMS) with additional features of arachnodactly, acroosteolysis, pesplanus, and onychogryphosis, (3) aggressive periodontitis 1 (AP1) characterized by severe and protracted gingival infections, leading to tooth loss. All three phenotypes are associated with autosomal recessive inheritance.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"CTSC-related disorder","synonyms":[{"name":"CTSC-related disorder","type":"exact"}],"termid":"MONDO:0800465","xrefs":{"Monarch":{"xref_id":"0800465"}}}


id: GO:1900869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tatiopterin.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"pteridine-containing compound metabolic process","termid":"GO:0042558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"tatiopterin metabolic process","synonyms":[{"name":"tatiopterin metabolism","type":"exact"}],"termid":"GO:1900869"}


id: PBO:0113355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for proper cell fusion and cell morphology; acts as phosphorylation-regulated noise suppressor of pheromone signaling pathway; forms a complex with Bud14p and Kel2p that regulates Bnr1p (formin) to affect actin cable assembly, cytokinesis, and polarized growth; functions in a complex with Kel2p to negatively regulate mitotic exit, interacts with Tem1p and Lte1p; localizes to regions of polarized growth; potential Cdc28p substrate","termid":"PBO:0113355"}


id: MONDO:1010561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spina bifida occulta that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida occulta, non-human animal","termid":"MONDO:1010048"},{"relation_name":"is_a","term_name":"spina bifida, dog","termid":"MONDO:1010556"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spina bifida occulta, dog","secondary_identifiers":["OMIA:000934-9615"],"termid":"MONDO:1010561","xrefs":{"Monarch":{"xref_id":"1010561"}}}


id: MONDO:0017677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"punctate palmoplantar keratoderma","termid":"MONDO:0017675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"focal acral hyperkeratosis","secondary_identifiers":["MEDGEN:724380","UMLS:C1302839","Orphanet:308013","GARD:21299","SCTID:400115004"],"synonyms":[{"name":"PPKP3 without elastoidosis","type":"exact"},{"name":"PPPK3 without elastoidosis","type":"exact"},{"name":"punctate palmoplantar hyperkeratosis type 3 without elastoidosis","type":"exact"},{"name":"punctate palmoplantar keratoderma type 3 without elastoidosis","type":"exact"}],"termid":"MONDO:0017677","xrefs":{"Monarch":{"xref_id":"0017677"}}}


id: PATO:0002184
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Cyclic cyclicity inheres in a molecule when the atoms of the molecule do contain at least one cycle in the atom-atom connection paths (through bonds).","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclicity","termid":"PATO:0002183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclic cyclicity","termid":"PATO:0002184"}


id: PBO:0042483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDH8 antisense RNA 1","termid":"PBO:0042483"}


id: FYPO:0004030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 5' deoxyribonuclease (pyrimidine dimer) activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased endodeoxyribonuclease activity","termid":"FYPO:0002037"},{"relation_name":"is_a","term_name":"abnormal 5' deoxyribonuclease (pyrimidine dimer) activity","termid":"FYPO:0004028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0005447","FYPO:0000707","FYPO:0000661","FYPO:0000002","FYPO:0000654"],"is_obsolete":false,"name":"decreased 5' deoxyribonuclease (pyrimidine dimer) activity","synonyms":[{"name":"reduced 5' deoxyribonuclease (pyrimidine dimer) activity","type":"exact"}],"termid":"FYPO:0004030"}


id: GO:0033197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin E stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to vitamin E","synonyms":[{"name":"response to DL-alpha-tocopherol acetate","type":"narrow"},{"name":"response to DL-alpha-tocopheryl acetate","type":"narrow"},{"name":"response to O-Acetyl-alpha-tocopherol","type":"narrow"}],"termid":"GO:0033197"}


id: GO:0047464
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (heparosan-N-sulfate)(n) = (heparan-N-sulfate)(n). Converts D-glucosyluronate residues to L-iduronate residues.","definition_xrefs":["MetaCyc:5.1.3.17-RXN","EC:5.1.3.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"heparosan-N-sulfate-glucuronate 5-epimerase activity","secondary_identifiers":["RHEA:20197","Reactome:R-HSA-2024100","Reactome:R-HSA-2076371"],"synonyms":[{"name":"C-5 uronosyl epimerase activity","type":"related"},{"name":"D-glucuronyl C-5 epimerase activity","type":"related"},{"name":"heparosan epimerase activity","type":"related"},{"name":"heparosan-N-sulfate-D-glucuronosyl 5-epimerase activity","type":"related"},{"name":"heparosan-N-sulphate-glucuronate 5-epimerase activity","type":"exact"},{"name":"poly[(1,4)-beta-D-glucuronosyl-(1,4)-N-sulfo-alpha-D-glucosaminyl] glucurono-5-epimerase activity","type":"related"},{"name":"polyglucuronate epimerase activity","type":"related"}],"termid":"GO:0047464"}


id: GO:0008193
data:
  {"annotated_genes":["SJAG_04233"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117304],"is_not":false,"summary":null,"term":"GO:0008193"}]},"cv_name":"molecular_function","definition":"Catalysis of the posttranscriptional addition of a guanyl residue to the 5' end of a tRNA molecule; observed for His tRNAs.","definition_xrefs":["PMID:1660461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA guanylyltransferase activity","termid":"GO:0008192"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04233":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140098","GO:0016779","GO:0140101","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"tRNA guanylyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:54564","EC:2.7.7.79"],"termid":"GO:0008193","terms_by_termid":{"GO:0008193":null}}


id: MONDO:0014558
data:
  {"annotated_genes":["SJAG_02165"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84922],"is_not":false,"summary":null,"term":"MONDO:0014558"}]},"cv_name":"mondo","definition":"A rare genetic neurodevelopmental disorder characterized by global developmental delay (DD) and variable degrees of intellectual disability (ID) with delayed or limited/absent speech development associated with neonatal hypotonia, feeding difficulties, cardiac anomalies and dysmorphic facial features, predominantly broad nasal tip and thin, tented upper lip. Microcephaly, frequent infections, gastrointestinal and/or ocular anomalies have also been described.","definition_xrefs":["Orphanet:457193"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"},{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02165":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0002320","MONDO:0005497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant intellectual disability-craniofacial anomalies-cardiac defects syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:1954","MEDGEN:903767","GARD:17797","DOID:0070062","OMIM:616268","UMLS:C4225396"],"synonyms":[{"name":"Arboleda-Tham syndrome","type":"exact"},{"name":"KAT6A Syndrome","type":"exact"},{"name":"MRD32","type":"exact"},{"name":"autosomal dominant intellectual disability 32","type":"exact"},{"name":"autosomal dominant intellectual disability-craniofacial anomalies-cardiac defects syndrome","type":"exact"},{"name":"autosomal dominant mental retardation 32","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 32","type":"related"},{"name":"intellectual disability, autosomal dominant 32","type":"related"},{"name":"intellectual disability, autosomal dominant type 32","type":"exact"},{"name":"mental retardation, autosomal dominant 32","type":"related"},{"name":"mental retardation, autosomal dominant type 32","type":"exact"}],"termid":"MONDO:0014558","terms_by_termid":{"MONDO:0014558":null},"xrefs":{"Monarch":{"xref_id":"0014558"}}}


id: FYPO:0006942
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of lipid binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal lipid binding","termid":"FYPO:0006942"}


id: GO:0015052
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with epinephrine or norepinephrine to initiate a change in cell activity via activation of a G protein, with pharmacological characteristics of beta3-adrenergic receptors.","definition_xrefs":["GOC:mah","IUPHAR_GPCR:1274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-adrenergic receptor activity","termid":"GO:0004939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"beta3-adrenergic receptor activity","synonyms":[{"name":"beta3 adrenoceptor","type":"exact"}],"termid":"GO:0015052"}


id: MONDO:0020018
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cranial malformation (obsolete MONDO:0020018)","secondary_identifiers":["Orphanet:98038"],"termid":"MONDO:0020018","xrefs":{"Monarch":{"xref_id":"0020018"}}}


id: PBO:0046145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 6","termid":"PBO:0046145"}


id: GO:2001259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cation channel activity.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ion transmembrane transporter activity","termid":"GO:0032414"},{"relation_name":"is_a","term_name":"positive regulation of cation transmembrane transport","termid":"GO:1904064"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cation channel activity","synonyms":[{"name":"positive regulation of cation diffusion facilitator activity","type":"exact"},{"name":"positive regulation of nonselective cation channel activity","type":"exact"}],"termid":"GO:2001259"}


id: SO:1001287
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A recoding signal that is found many hundreds of nucleotides 3' of a redefined stop codon.","direct_ancestors":[{"relation_name":"is_a","term_name":"three_prime_recoding_site","termid":"SO:1001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distant_three_prime_recoding_signal","synonyms":[{"name":"distant three prime recoding signal","type":"exact"}],"termid":"SO:1001287"}


id: GO:0050653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The elongation of chondroitin sulfate proteoglycan chains by alternate addition of N-acetylhexosamine and GlcUA residues to the GAG-protein linkage region tetrasaccharide of chondroitin sulfate.","definition_xrefs":["GOC:ai","PMID:11788602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"part_of","term_name":"chondroitin sulfate proteoglycan biosynthetic process","termid":"GO:0050650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"chondroitin sulfate proteoglycan biosynthetic process, chain elongation","synonyms":[{"name":"chondroitin sulfate proteoglycan anabolism, polysaccharide chain anabolism","type":"exact"},{"name":"chondroitin sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process","type":"exact"},{"name":"chondroitin sulfate proteoglycan chain elongation","type":"exact"},{"name":"chondroitin sulfate proteoglycan formation, polysaccharide chain biosynthesis","type":"exact"},{"name":"chondroitin sulfate proteoglycan formation, polysaccharide chain formation","type":"exact"},{"name":"chondroitin sulfate proteoglycan synthesis, polysaccharide chain synthesis","type":"exact"},{"name":"chondroitin sulphate proteoglycan biosynthesis, polysaccharide chain biosynthesis","type":"exact"},{"name":"chondroitin sulphate proteoglycan biosynthesis, polysaccharide chain biosynthetic process","type":"exact"}],"termid":"GO:0050653"}


id: MONDO:0011867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microphthalmia with cyst, bilateral facial clefts, and limb anomalies","secondary_identifiers":["MEDGEN:375210","MESH:C564370","UMLS:C1843492","OMIM:607597"],"synonyms":[{"name":"microphthalmia with cyst, bilateral facial clefts, and limb anomalies","type":"exact"}],"termid":"MONDO:0011867","xrefs":{"Monarch":{"xref_id":"0011867"}}}


id: GO:0010926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structure is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete anatomical structure formation (obsolete GO:0010926)","synonyms":[{"name":"anatomical structure formation","type":"exact"}],"termid":"GO:0010926"}


id: MONDO:0016574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypo- and hypermelanotic cutaneous macules-retarded growth-intellectual disability syndrome is a neurocutaneous syndrome characterized by congenital hypomelanotic and hypermelanotic cutaneous macules. It has been described in individuals spanning three generations of an Indian family. Some of the patients also had retarded growth and intellectual deficit.","definition_xrefs":["Orphanet:2435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin pigmentation disorder","termid":"MONDO:0019288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hypo- and hypermelanotic cutaneous macules-retarded growth-intellectual disability syndrome","secondary_identifiers":["UMLS:C1835172","OMIM:154000","SCTID:733469003","GARD:3347","MEDGEN:371988","MESH:C537836"],"synonyms":[{"name":"Westerhof Beemer Cormane syndrome","type":"related"},{"name":"Westerhof-Beemer-Cormane syndrome","type":"exact"},{"name":"congenital hypomelanotic and hypermelanotic macules","type":"related"},{"name":"hereditary congenital hypopigmented and hyperpigmented macules","type":"related"},{"name":"macules hereditary congenital hypopigmented and hyperpigmented","type":"related"},{"name":"macules, hereditary congenital hypopigmented and hyperpigmented","type":"related"}],"termid":"MONDO:0016574","xrefs":{"Monarch":{"xref_id":"0016574"}}}


id: GO:1903866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a palisade mesophyll over time, from its formation to the mature structure.","definition_xrefs":["PMID:24663344","GO_REF:0000080","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"palisade mesophyll development","synonyms":[{"name":"palisade parenchyma development","type":"related"}],"termid":"GO:1903866"}


id: GO:0019970
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-11.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor binding","termid":"GO:0019838"},{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"interleukin-11 binding","synonyms":[{"name":"IL-11 binding","type":"exact"}],"termid":"GO:0019970"}


id: GO:0048562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Morphogenesis, during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Morphogenesis is the process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"embryonic organ development","termid":"GO:0048568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic organ morphogenesis","termid":"GO:0048562"}


id: FYPO:0001989
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to pH lower than that of standard S. pombe growth media (about 5.8). Cells stop growing (and may die) at a pH that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to low pH","synonyms":[{"name":"decreased growth during cellular response to low pH","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to low pH","type":"exact"},{"name":"hypersensitive to low pH","type":"exact"},{"name":"sensitive to low pH during mitotic cell cycle","type":"related"},{"name":"sensitive to low pH during vegetative growth","type":"exact"}],"termid":"FYPO:0001989"}


id: PBO:0031122
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_proline_nitrogen_source","termid":"PBO:0031122"}


id: GO:0036261
data:
  {"annotated_genes":["SJAG_03901"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95525],"is_not":false,"summary":null,"term":"GO:0036261"}]},"cv_name":"biological_process","definition":"Hypermethylation of the 7-(mono)methylguanosine (m(7)G) cap structure at the 2' position of the guanosine residue to convert a mono-methylated cap to a 2,2,7-trimethylguanosine cap structure. This type of cap modification occurs on small nuclear RNAs (snRNAs) and small nucleolar RNAs (snoRNAs) and is dependent on prior guanine-N7 methylation.","definition_xrefs":["GOC:rl","PMID:11983179","PMID:18775984","GOC:BHF","GOC:bf","GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA methylation","termid":"GO:0001510"},{"relation_name":"is_a","term_name":"RNA capping","termid":"GO:0036260"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"7-methylguanosine cap hypermethylation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"2,2,7-trimethylguanosine cap formation","type":"exact"},{"name":"TMG cap formation","type":"exact"},{"name":"conversion of m(7)G to m(3)G","type":"exact"},{"name":"hypermethylation of snRNA cap","type":"narrow"},{"name":"hypermethylation of snoRNA cap","type":"narrow"},{"name":"m(7)G cap hypermethylation","type":"exact"},{"name":"snRNA capping","type":"narrow"},{"name":"snoRNA capping","type":"narrow"}],"termid":"GO:0036261","terms_by_termid":{"GO:0036261":null}}


id: GO:0000813
data:
  {"annotated_genes":["SJAG_01981","SJAG_04349"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87594,91483],"is_not":false,"summary":null,"term":"GO:0000813"}]},"cv_name":"cellular_component","definition":"An endosomal sorting complex required for transport. It consists of the class E vacuolar protein sorting (Vps) proteins and interacts with ubiquitinated cargoes.","definition_xrefs":["PMID:12892785","GOC:rb","PMID:12900393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ESCRT complex","termid":"GO:0036452"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"endosome membrane","termid":"GO:0010008"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01981":null,"SJAG_04349":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0031410","GO:0005768","GO:0005575"],"is_obsolete":false,"name":"ESCRT I complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"endosomal sorting complex required for transport","type":"broad"}],"termid":"GO:0000813","terms_by_termid":{"GO:0000813":null}}


id: PBO:0036339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claspin, Mrc1","termid":"PBO:0036339"}


id: GO:0019637
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id: PR:B8Y7Y5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- iec5 gene.","definition_xrefs":["UniProtKB:B8Y7Y5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 complex subunit 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.14","synonyms":[{"name":"Spom972h-iec5","type":"exact"}],"termid":"PR:B8Y7Y5"}


id: MONDO:0014667
data:
  {"annotated_genes":["SJAG_05199"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84578],"is_not":false,"summary":null,"term":"MONDO:0014667"}]},"cv_name":"mondo","definition":"Any fatal infantile encephalocardiomyopathy in which the cause of the disease is a mutation in the COA5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatal infantile encephalocardiomyopathy","termid":"MONDO:0015487"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05199":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005267","MONDO:0005336","MONDO:0004069"],"is_obsolete":false,"name":"cardioencephalomyopathy, fatal infantile, due to cytochrome c oxidase deficiency 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:903495","DOID:0080359","OMIM:616500","UMLS:C4225154","GARD:18572"],"synonyms":[{"name":"CEMCOX3","type":"related"},{"name":"COA5 fatal infantile encephalocardiomyopathy","type":"exact"},{"name":"cardioencephalomyopathy, fatal infantile, due to cytochrome C oxidase deficiency type 3","type":"exact"},{"name":"cardioencephalomyopathy, fatal infantile, due to cytochrome c oxidase deficiency 3","type":"exact"},{"name":"fatal infantile encephalocardiomyopathy caused by mutation in COA5","type":"exact"},{"name":"mitochondrial complex IV, deficiency, nuclear type 9","type":"exact"}],"termid":"MONDO:0014667","terms_by_termid":{"MONDO:0014667":null},"xrefs":{"Monarch":{"xref_id":"0014667"}}}


id: SO:0000983
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The attribute of how many strands are present in a nucleotide polymer.","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"strand_attribute","synonyms":[{"name":"strand attribute","type":"exact"}],"termid":"SO:0000983"}


id: PR:Q9USJ8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsg1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USJ8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTD kinase subunit gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.08","synonyms":[{"name":"CTD kinase subunit 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CTDK-I gamma subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lsg1","type":"exact"}],"termid":"PR:Q9USJ8"}


id: GO:0003857
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-hydroxyacyl-CoA + NAD+ = 3-oxoacyl-CoA + NADH + H+.","definition_xrefs":["EC:1.1.1.35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r1063","Reactome:R-HSA-193455","Reactome:R-HSA-6809264","Reactome:R-HSA-77331","Reactome:R-HSA-77342","RHEA:22432","Reactome:R-HSA-508369","Reactome:R-HSA-77254","Reactome:R-HSA-390251","Reactome:R-HSA-389995","Reactome:R-HSA-70837","Reactome:R-HSA-193508","Reactome:R-HSA-77303","Reactome:R-HSA-77312","MetaCyc:OHACYL-COA-DEHYDROG-RXN","Reactome:R-HSA-77323","Reactome:R-HSA-77283"],"synonyms":[{"name":"3-oxoacyl-thioester reductase activity","type":"related"},{"name":"L-3-hydroxyacyl CoA dehydrogenase activity","type":"related"},{"name":"L-3-hydroxyacyl coenzyme A dehydrogenase activity","type":"related"},{"name":"beta-hydroxyacyl dehydrogenase activity","type":"related"},{"name":"beta-hydroxyacyl-coenzyme A synthetase activity","type":"related"},{"name":"beta-hydroxyacylcoenzyme A dehydrogenase activity","type":"related"},{"name":"beta-hydroxybutyrylcoenzyme A dehydrogenase activity","type":"narrow"},{"name":"beta-keto-reductase activity","type":"related"},{"name":"beta-ketoacyl-CoA reductase","type":"broad"}],"termid":"GO:0003857"}


id: GO:1900357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nigerotriose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"nigerotriose transport","termid":"GO:2001091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of nigerotriose transport","termid":"GO:1900357"}


id: GO:0045560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the TRAIL (TNF-related apoptosis inducing ligand) receptor.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of TRAIL receptor biosynthetic process (obsolete GO:0045560)","synonyms":[{"name":"regulation of TRAIL receptor anabolism","type":"exact"},{"name":"regulation of TRAIL receptor biosynthesis","type":"exact"},{"name":"regulation of TRAIL receptor formation","type":"exact"},{"name":"regulation of TRAIL receptor synthesis","type":"exact"}],"termid":"GO:0045560"}


id: MONDO:0030537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central hypoventilation syndrome, congenital","termid":"MONDO:0800031"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central hypoventilation syndrome, congenital, 2, and autonomic dysfunction","secondary_identifiers":["MEDGEN:1794173","OMIM:619482","UMLS:C5561963"],"synonyms":[{"name":"CCHS2","type":"exact"},{"name":"central hypoventilation syndrome, congenital, 2, and autonomic dysfunction","type":"exact"}],"termid":"MONDO:0030537","xrefs":{"Monarch":{"xref_id":"0030537"}}}


id: PBO:0054071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1419","termid":"PBO:0054071"}


id: GO:0010648
data:
  {"annotated_genes":["SJAG_03799","SJAG_03893","SJAG_05346","SJAG_03486","SJAG_04259","SJAG_05000","SJAG_04249","SJAG_00266","SJAG_01790","SJAG_02858","SJAG_03089","SJAG_00642","SJAG_03263","SJAG_03355","SJAG_02311","SJAG_02000","SJAG_00975","SJAG_01386","SJAG_02231","SJAG_01983","SJAG_02481","SJAG_01142","SJAG_02379","SJAG_02013","SJAG_00883","SJAG_00610","SJAG_00424","SJAG_03185","SJAG_00990","SJAG_00824","SJAG_01679","SJAG_02392","SJAG_01297","SJAG_02514","SJAG_04455","SJAG_03353","SJAG_04910","SJAG_03072","SJAG_03126","SJAG_02169","SJAG_00169","SJAG_01253","SJAG_02451","SJAG_04825","SJAG_04462","SJAG_04522","SJAG_00875","SJAG_06270","SJAG_00991","SJAG_04206","SJAG_00526","SJAG_01245","SJAG_01114","SJAG_04551","SJAG_01464","SJAG_03592","SJAG_02336","SJAG_00289","SJAG_00229","SJAG_02426","SJAG_00457","SJAG_02765","SJAG_02233","SJAG_04943","SJAG_01184","SJAG_03678","SJAG_03501","SJAG_03508","SJAG_03681","SJAG_00293","SJAG_00209"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107739,113275,90204,106723,111451,103394,99089,113763,115397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[115877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106072"},{"annotations":[91572,107458,92229,115878,99936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110034"},{"annotations":[100493,115626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106057"},{"annotations":[106534,107100,98940,103303,95338,117813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[102343,101645,88913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902660"},{"annotations":[106625,87681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043409"},{"annotations":[93685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[94518,95459,98942,91146,117814,116574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903753"},{"annotations":[106626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180040"},{"annotations":[92805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090029"},{"annotations":[110855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046580"},{"annotations":[104836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035024"},{"annotations":[95126,92940,99169,100773,90208,104530,109662,106586,106725,115400,91216,107030,99091,92323,92407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[111204,90722,105387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000639"},{"annotations":[90745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032007"},{"annotations":[113470,108756,99073,112652,87497,95586,115627,116538,110447,114074,104624,106888,106639,109168,100949,98377,115981,93658,117727,92811,102511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904262"},{"annotations":[115772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903940"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of cell communication. 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id: MONDO:0006454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare primary thymic carcinoma, characterized by the presence of keratinizing or non-keratinizing malignant squamous cells. Approximately 10-20% of cases occur in combination with thymoma. The prognosis depends on the tumor stage and the degree of cellular differentiation.","definition_xrefs":["NCIT:C6455"],"gene_count":0,"genotype_count":0,"name":"obsolete thymic squamous cell carcinoma (obsolete MONDO:0006454)","termid":"MONDO:0006454","xrefs":{"Monarch":{"xref_id":"0006454"}}}


id: PBO:0116248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipid raft associated CH-OH group oxidoreductase, implicated in lipid/sterol metabolism","termid":"PBO:0116248"}


id: GO:0015124
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of allantoate from one side of a membrane to the other. Allantoate is the end product of purine metabolism in mammals and some fish, formed form allantoin. It is widely distributed in plants as an important source of stored nitrogen.","definition_xrefs":["ISBN:0198547684","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"allantoate transmembrane transporter activity","termid":"GO:0015124"}


id: GO:0030902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium).","definition_xrefs":["PMID:4975589","PMID:4992177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"brain development","termid":"GO:0007420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hindbrain development","synonyms":[{"name":"rhombencephalon development","type":"exact"}],"termid":"GO:0030902"}


id: MONDO:0012377
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"Asperger syndrome","termid":"MONDO:0005259"},{"relation_name":"is_a","term_name":"Asperger syndrome, susceptibility to","termid":"MONDO:0100440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asperger syndrome, susceptibility to, 4","secondary_identifiers":["MEDGEN:400650","OMIM:609954","UMLS:C1864961"],"synonyms":[{"name":"ASPERGER syndrome, susceptibility to, 4","type":"related"},{"name":"ASPG4","type":"exact"},{"name":"Asperger syndrome susceptibility 4","type":"exact"}],"termid":"MONDO:0012377","xrefs":{"Monarch":{"xref_id":"0012377"}}}


id: PBO:0070646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 17","termid":"PBO:0070646"}


id: GO:0016234
data:
  {"annotated_genes":["SJAG_04187","SJAG_04768","SJAG_01805","SJAG_03048","SJAG_00082","SJAG_04055","SJAG_01186","SJAG_04645","SJAG_01837","SJAG_00471","SJAG_00302","SJAG_04140","SJAG_01374","SJAG_03745","SJAG_00335","SJAG_01408","SJAG_03543","SJAG_04601","SJAG_00178","SJAG_03161","SJAG_04855","SJAG_03300"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[104873,86969,103799,101775,88213,91723,101855,89465,105235,90431,110683,112085,112087,88214,114385,114984,116160,111537,112086,88473,93274,114985,103706,98538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140602"}]},"cv_name":"cellular_component","definition":"A discrete intracellular part formed of aggregated molecules such as proteins or other biopolymers.","definition_xrefs":["PMID:11121744","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00178":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00471":null,"SJAG_01186":null,"SJAG_01374":null,"SJAG_01408":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03161":null,"SJAG_03300":null,"SJAG_03543":null,"SJAG_03745":null,"SJAG_04055":null,"SJAG_04140":null,"SJAG_04187":null,"SJAG_04601":null,"SJAG_04645":null,"SJAG_04768":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"inclusion body","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Inclusion_bodies","NIF_Subcellular:sao120573470"],"synonyms":[{"name":"cellular inclusion","type":"related"},{"name":"neuronal cytoplasmic inclusion","type":"narrow"}],"termid":"GO:0016234","terms_by_termid":{"GO:0140602":null}}


id: PBO:0030211
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_heat","termid":"PBO:0030211"}


id: MONDO:0016806
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Maternally-inherited mitochondrial dystonia is a rare neurological mitochondrial DNA-related disorder characterized clinically by progressive pediatric-onset dystonia with variable degrees of severity.","definition_xrefs":["Orphanet:254851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"maternally-inherited mitochondrial dystonia","secondary_identifiers":["MEDGEN:907850","UMLS:C4274074","GARD:20767","SCTID:717054001"],"termid":"MONDO:0016806","xrefs":{"Monarch":{"xref_id":"0016806"}}}


id: PBO:0081392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 232","termid":"PBO:0081392"}


id: GO:0003926
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate.","definition_xrefs":["EC:3.6.1.47"],"gene_count":0,"genotype_count":0,"name":"obsolete ARF small monomeric GTPase activity (obsolete GO:0003926)","synonyms":[{"name":"ARF small monomeric GTPase activity","type":"exact"}],"termid":"GO:0003926"}


id: PBO:0027233
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_mitotic_spindle_midzone","termid":"PBO:0027233"}


id: FYPO:0000625
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which premeiotic DNA replication is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA replication","termid":"FYPO:0000217"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0000293","FYPO:0001985"],"is_obsolete":false,"name":"abnormal premeiotic DNA replication","synonyms":[{"name":"abnormal meiotic DNA replication","type":"related"},{"name":"abnormal meiotic DNA synthesis","type":"related"},{"name":"abnormal premeiotic DNA synthesis","type":"related"}],"termid":"FYPO:0000625"}


id: CHEBI:38338
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminopyrimidine","termid":"CHEBI:38338"}


id: MONDO:0002088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal vein occlusion","termid":"MONDO:0006951"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"partial retinal vein occlusion","secondary_identifiers":["NCIT:C35341","MEDGEN:78753","SCTID:65593009","DOID:1726","UMLS:C0271080"],"synonyms":[{"name":"partial occlusion of retinal vein","type":"exact"},{"name":"partial retinal vein occlusion","type":"exact"}],"termid":"MONDO:0002088","xrefs":{"Monarch":{"xref_id":"0002088"}}}


id: PBO:0038428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha 1,3-galactosyltransferase 2","termid":"PBO:0038428"}


id: PBO:0004016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MutS protein homolog 2","termid":"PBO:0004016"}


id: PBO:0062476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily G member 15 pseudogene","termid":"PBO:0062476"}


id: PR:Q9Y738
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mis12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein mis12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.04c","synonyms":[{"name":"NMS complex subunit mis12 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mis12","type":"exact"}],"termid":"PR:Q9Y738"}


id: FYPO:0004762
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the kinetochore is abnormal during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore","termid":"FYPO:0005209"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during meiotic cell cycle","termid":"FYPO:0006529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to kinetochore during meiosis","synonyms":[{"name":"abnormal protein localisation to kinetochore during meiosis","type":"exact"},{"name":"abnormal protein localization to kinetochore during meiotic nuclear division","type":"exact"},{"name":"abnormal protein localization to meiotic kinetochore","type":"exact"}],"termid":"FYPO:0004762"}


id: PBO:0031897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron-sulfur cluster assembly protein Nfu1 (predicted)","termid":"PBO:0031897"}


id: PBO:0074187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 8","termid":"PBO:0074187"}


id: GO:0032824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of natural killer cell differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of natural killer cell activation","termid":"GO:0032815"},{"relation_name":"is_a","term_name":"regulation of natural killer cell differentiation","termid":"GO:0032823"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte differentiation","termid":"GO:0045620"},{"relation_name":"negatively_regulates","term_name":"natural killer cell differentiation","termid":"GO:0001779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of natural killer cell differentiation","synonyms":[{"name":"down regulation of natural killer cell differentiation","type":"exact"},{"name":"down-regulation of natural killer cell differentiation","type":"exact"},{"name":"downregulation of natural killer cell differentiation","type":"exact"},{"name":"inhibition of natural killer cell differentiation","type":"narrow"},{"name":"negative regulation of NK cell differentiation","type":"exact"},{"name":"negative regulation of natural killer cell development","type":"related"}],"termid":"GO:0032824"}


id: MONDO:1010988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrocephalus that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocephalus, non-human animal","termid":"MONDO:1010233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus, horse","secondary_identifiers":["OMIA:000487-9796"],"termid":"MONDO:1010988","xrefs":{"Monarch":{"xref_id":"1010988"}}}


id: PBO:0047703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin 2","termid":"PBO:0047703"}


id: PBO:0004470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L18","termid":"PBO:0004470"}


id: PBO:0066801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 100","termid":"PBO:0066801"}


id: MONDO:0042962
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypogonadism","termid":"MONDO:0002146"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Slti-Salem syndrome","secondary_identifiers":["MEDGEN:419036","MESH:C536673","UMLS:C2931284"],"synonyms":[{"name":"Slti Salem syndrome","type":"related"},{"name":"hypogonadism and frontoparietal alopecia","type":"related"},{"name":"hypogonadotropic hypogonadism alopecia","type":"related"}],"termid":"MONDO:0042962","xrefs":{"Monarch":{"xref_id":"0042962"}}}


id: PBO:0052766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 58","termid":"PBO:0052766"}


id: PBO:0015254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E1 ubiquitin-like conjugating enzyme Atg7","termid":"PBO:0015254"}


id: PR:Q09796
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- kap111 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin beta-like protein kap111 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22G7.02","synonyms":[{"name":"Spom972h-kap111","type":"exact"},{"name":"karyopherin-111 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09796"}


id: PBO:0044928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol kinase gamma","termid":"PBO:0044928"}


id: GO:0008836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: meso-2,6-diaminopimelate + H+ = L-lysine + CO2.","definition_xrefs":["EC:4.1.1.20","RHEA:15101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"diaminopimelate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R00451","MetaCyc:DIAMINOPIMDECARB-RXN"],"synonyms":[{"name":"DAP decarboxylase activity","type":"related"},{"name":"DAP-decarboxylase activity","type":"related"},{"name":"diaminopimelic acid decarboxylase activity","type":"related"},{"name":"meso-2,6-diaminoheptanedioate carboxy-lyase (L-lysine-forming)","type":"related"},{"name":"meso-2,6-diaminoheptanedioate carboxy-lyase activity","type":"related"},{"name":"meso-diaminopimelate decarboxylase activity","type":"related"}],"termid":"GO:0008836"}


id: PR:Q09708
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC12G12.16c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C12G12.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.16c","synonyms":[{"name":"Spom972h-SPAC12G12.16c","type":"exact"}],"termid":"PR:Q09708"}


id: GO:2000818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of myoblast proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of myoblast proliferation","termid":"GO:2000291"},{"relation_name":"negatively_regulates","term_name":"myoblast proliferation","termid":"GO:0051450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myoblast proliferation","termid":"GO:2000818"}


id: PBO:0043108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome transmission fidelity factor 18","termid":"PBO:0043108"}


id: MONDO:0018142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe neonatal pyruvate carboxylase (PC) deficiency (Type B) is a rare, extremely severe form of PC deficiency characterized by severe, early-onset metabolic acidosis, and a generally fatal outcome in early infancy.","definition_xrefs":["Orphanet:353314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate carboxylase deficiency disease","termid":"MONDO:0009949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"pyruvate carboxylase deficiency, severe neonatal type","secondary_identifiers":["UMLS:C5679929","GARD:17537","MEDGEN:1842956"],"synonyms":[{"name":"pyruvate carboxylase deficiency type B","type":"exact"}],"termid":"MONDO:0018142","xrefs":{"Monarch":{"xref_id":"0018142"}}}


id: PBO:0077509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 229A","termid":"PBO:0077509"}


id: GO:0040003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synthesis and deposition of a chitin-based noncellular, hardened, or membranous secretion from an epithelial sheet. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cuticle development","termid":"GO:0042335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chitin-based cuticle development","synonyms":[{"name":"chitin-based cuticle anabolism","type":"exact"},{"name":"chitin-based cuticle biosynthetic process","type":"exact"},{"name":"chitin-based cuticle formation","type":"exact"},{"name":"chitin-based cuticle synthesis","type":"exact"}],"termid":"GO:0040003"}


id: PBO:0000191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU-rRNA maturation protein Tsr4 homolog 2 (predicted)","termid":"PBO:0000191"}


id: PBO:0052744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 36","termid":"PBO:0052744"}


id: GO:0032051
data:
  {"annotated_genes":["SJAG_02282","SJAG_00152"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76415,77171],"is_not":false,"summary":null,"term":"GO:0032051"}]},"cv_name":"molecular_function","definition":"Binding to a clathrin light chain.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin binding","termid":"GO:0030276"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00152":null,"SJAG_02282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"clathrin light chain binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0032051","terms_by_termid":{"GO:0032051":null}}


id: GO:0007180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta ligand binding to type II receptor (obsolete GO:0007180)","synonyms":[{"name":"TGF-beta ligand binding to type II receptor","type":"exact"},{"name":"TGFbeta ligand binding to type II receptor","type":"exact"},{"name":"transforming growth factor beta ligand binding to type II receptor","type":"exact"}],"termid":"GO:0007180"}


id: GO:0042049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of acyl-CoA within a cell.","definition_xrefs":["GOC:tb","GOC:ai","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular acyl-CoA homeostasis","synonyms":[{"name":"cell acyl-CoA homeostasis","type":"exact"},{"name":"cellular acyl-CoA homeostasis","type":"exact"}],"termid":"GO:0042049"}


id: MONDO:0018809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hepatitis","termid":"MONDO:0002251"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"idiopathic peliosis hepatis","secondary_identifiers":["Orphanet:480524","UMLS:C5680101","GARD:21977","MEDGEN:1814452"],"synonyms":[{"name":"idiopathic peliosis hepatitis","type":"exact"}],"termid":"MONDO:0018809","xrefs":{"Monarch":{"xref_id":"0018809"}}}


id: PBO:0039465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 13B","termid":"PBO:0039465"}


id: FYPO:0003241
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation fails to separate chromosomes into two equal masses. Unequal mitotic sister chromatid separation may be complete, with two distinct unequal DNA masses located at or near the ends of an elongated mitotic spindle, or incomplete.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"altered DNA level during vegetative growth","termid":"FYPO:0004321"},{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001320","FYPO:0000337","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"unequal mitotic sister chromatid segregation","synonyms":[{"name":"chromosome missegregation","type":"exact"},{"name":"mitotic chromosome nondisjunction","type":"exact"},{"name":"unequal mitotic chromosome segregation","type":"exact"},{"name":"unequal mitotic sister chromatid segregation during vegetative growth","type":"exact"},{"name":"unequal mitotic sister chromatid separation","type":"related"},{"name":"unequal sister chromatid segregation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003241"}


id: MONDO:0004638
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An antiquated term that refers to a non-Hodgkin lymphoma composed of small and medium sized lymphocytes.","definition_xrefs":["NCIT:C26919"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"sarcoma","termid":"MONDO:0005089"},{"relation_name":"is_a","term_name":"lymphatic system cancer","termid":"MONDO:0000612"},{"relation_name":"is_a","term_name":"non-Hodgkin lymphoma","termid":"MONDO:0018908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"lymphosarcoma","secondary_identifiers":["DOID:8675","GARD:6946","ICD9:200.10","ICD9:200.0","ICD9:200.7","ICD9:200.1","NCIT:C27824","MEDGEN:811370","SCTID:118601006","SCTID:188498009","SCTID:373168002","UMLS:C3714542"],"synonyms":[{"name":"diffuse lymphoma","type":"exact"},{"name":"lymphosarcoma","type":"exact"},{"name":"malignant lymphoma (category)","type":"related"}],"termid":"MONDO:0004638","xrefs":{"Monarch":{"xref_id":"0004638"}}}


id: PBO:0067710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 8","termid":"PBO:0067710"}


id: GO:0019822
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subform of peroxisome that corresponds to an intermediate in a peroxisome assembly pathway, which operates by conversion of peroxisomal subforms in the direction P1, P2 -> P3 -> P4 -> P5 -> P6. P4 peroxisomes are distinguished from the other subforms on the bases of buoyant density and protein content.","definition_xrefs":["PMID:10629216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005777"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005777"],"is_obsolete":false,"name":"P4 peroxisome","synonyms":[{"name":"peroxisome vesicle","type":"broad"}],"termid":"GO:0019822"}


id: MONDO:0032778
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita","termid":"MONDO:0015168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis multiplex congenita 3, myogenic type","secondary_identifiers":["UMLS:C5193121","MEDGEN:1680655","DOID:0080979","OMIM:618484"],"synonyms":[{"name":"AMCM","type":"exact"},{"name":"arthrogryposis multiplex congenita, myogenic type","type":"exact"}],"termid":"MONDO:0032778","xrefs":{"Monarch":{"xref_id":"0032778"}}}


id: PBO:0050417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein D pseudogene 1","termid":"PBO:0050417"}


id: PBO:0063781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 6","termid":"PBO:0063781"}


id: PATO:0000018
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A luminous flux quality inhering in a bearer by virtue of the bearer's emitting longer wavelength light following the absorption of shorter wavelength radiation; fluorescence is common with aromatic compounds with several rings joined together.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"luminous flux","termid":"PATO:0001296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluorescence","termid":"PATO:0000018"}


id: MONDO:1011401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 1 diabetes mellitus that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder, non-human animal","termid":"MONDO:0700106"},{"relation_name":"is_a","term_name":"diabetes mellitus, non-human animal","termid":"MONDO:1010052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus, non-human animal","secondary_identifiers":["OMIA:000283"],"termid":"MONDO:1011401","xrefs":{"Monarch":{"xref_id":"1011401"}}}


id: MONDO:0100335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poisoning that is caused by exposure to a local anesthetic.","definition_xrefs":["MONDO:patterns/patterns/poisoning"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"local anesthetic poisoning","synonyms":[{"name":"local anesthetic poisoning","type":"exact"}],"termid":"MONDO:0100335","xrefs":{"Monarch":{"xref_id":"0100335"}}}


id: PBO:0055020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2435","termid":"PBO:0055020"}


id: GO:0007586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism.","definition_xrefs":["ISBN:0198506732","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"digestion","secondary_identifiers":["Reactome:R-HSA-8935690","Wikipedia:Digestion"],"termid":"GO:0007586"}


id: PBO:0056422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myristoylated alanine rich protein kinase C substrate pseudogene 1","termid":"PBO:0056422"}


id: GO:1990493
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex consisting of cyclin H and cyclin-dependent kinase 7 (CDK7). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:9857180"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclin H-CDK7 complex (obsolete GO:1990493)","synonyms":[{"name":"cyclin H-CDK7 complex","type":"exact"}],"termid":"GO:1990493"}


id: GO:0070692
data:
  {"annotated_genes":["SJAG_03967","SJAG_02057","SJAG_01149"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95287,110400,116486],"is_not":false,"summary":null,"term":"GO:0070692"}]},"cv_name":"cellular_component","definition":"A positive transcription elongation factor complex that comprises the CDK kinase CTK1 (in budding yeast), Lsk1 (in fission yeast) (corresponding to the Panther PTHR24056:SF39 family), a cyclin and an additional gamma subunit (corresponding to the InterPRO entry IPR024638).","definition_xrefs":["PMID:16721054","GOC:mah","GOC:vw","PMID:19328067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin/CDK positive transcription elongation factor complex","termid":"GO:0008024"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01149":null,"SJAG_02057":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005654","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"CTDK-1 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"C-terminal domain kinase I complex","type":"exact"},{"name":"CTDK-I complex","type":"exact"},{"name":"Ctk complex","type":"exact"},{"name":"trimeric positive transcription elongation factor complex b","type":"related"}],"termid":"GO:0070692","terms_by_termid":{"GO:0070692":null}}


id: PBO:0051509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of nuclear factor kappa B kinase regulatory subunit gamma","termid":"PBO:0051509"}


id: PBO:0044931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol kinase kappa","termid":"PBO:0044931"}


id: GO:0016839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of a carbon-oxygen bond. Enzymes with this activity are 'miscellaneous' carbon-oxygen lyases that cannot be grouped into one of the specific subclasses of the carbon-oxygen lyases.","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete other carbon-oxygen lyase activity (obsolete GO:0016839)","synonyms":[{"name":"other carbon-oxygen lyase activity","type":"exact"}],"termid":"GO:0016839"}


id: PBO:0046302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engrailed homeobox 2","termid":"PBO:0046302"}


id: PBO:0051252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-13-1 (pseudogene)","termid":"PBO:0051252"}


id: PATO:0002102
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a cell that arises by virtue of whether the bearer exhibits the ability to grow and proliferate in number through cell division.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular quality","termid":"PATO:0001396"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferative","termid":"PATO:0002102"}


id: GO:0051398
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of a lysine residue from the N-terminal of an oligopeptide or polypeptide chain.","definition_xrefs":["PMID:12799365","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal lysine aminopeptidase activity (obsolete GO:0051398)","synonyms":[{"name":"N-terminal lysine aminopeptidase activity","type":"exact"},{"name":"lysine aminopeptidase activity","type":"broad"},{"name":"lysyl aminopeptidase activity","type":"broad"}],"termid":"GO:0051398"}


id: PBO:0091549
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wee1-50 Overexpression Suppressor","termid":"PBO:0091549"}


id: MONDO:0010436
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic X-linked intellectual disability Lubs type","termid":"MONDO:0010283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"chromosome Xq28 duplication syndrome","secondary_identifiers":["GARD:15266","MEDGEN:411727","MESH:C567580","UMLS:C2749007","OMIM:300815"],"synonyms":[{"name":"chromosome Xq28 duplication syndrome","type":"exact"}],"termid":"MONDO:0010436","xrefs":{"Monarch":{"xref_id":"0010436"}}}


id: FYPO:0005882
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of gamma-glutamyl-2-aminobutyrate (also called gamma-Glu-Abu) measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular gamma-glutamyl-2-aminobutyrate level","synonyms":[{"name":"increased cellular gamma-Glu-Abu level","type":"related"},{"name":"increased cellular gamma-Glu-Abu(1-) level","type":"exact"},{"name":"increased cellular gamma-glutamyl-2-aminobutyrate level during mitotic cell cycle","type":"related"},{"name":"increased cellular gamma-glutamyl-2-aminobutyrate level during vegetative growth","type":"exact"},{"name":"increased gamma-glutamyl-2-aminobutyrate accumulation","type":"related"}],"termid":"FYPO:0005882"}


id: PBO:0044511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeleton regulator RNA","termid":"PBO:0044511"}


id: PBO:0072525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 54","termid":"PBO:0072525"}


id: PBO:0067941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 243","termid":"PBO:0067941"}


id: GO:2001097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a laminaritrioseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisaccharide transport","termid":"GO:2001088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"laminaritriose transport","termid":"GO:2001097"}


id: GO:0043376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of CD8-positive, alpha-beta T cell differentiation.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell differentiation","termid":"GO:0046637"},{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta T cell activation","termid":"GO:2001185"},{"relation_name":"regulates","term_name":"CD8-positive, alpha-beta T cell differentiation","termid":"GO:0043374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of CD8-positive, alpha-beta T cell differentiation","synonyms":[{"name":"regulation of CD8-positive T lymphocyte differentiation","type":"exact"},{"name":"regulation of CD8-positive T-cell differentiation","type":"exact"},{"name":"regulation of CD8-positive T-lymphocyte differentiation","type":"exact"},{"name":"regulation of CD8-positive, alpha beta T lymphocyte differentiation","type":"exact"},{"name":"regulation of CD8-positive, alpha beta T-cell differentiation","type":"exact"},{"name":"regulation of CD8-positive, alpha beta T-lymphocyte differentiation","type":"exact"},{"name":"regulation of CD8-positive, alpha-beta T cell development","type":"related"}],"termid":"GO:0043376"}


id: GO:0004939
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with epinephrine or norepinephrine to initiate a change in cell activity via activation of a G protein, with pharmacological characteristics of beta-adrenergic receptors; the activity involves transmitting the signal to the Gs alpha subunit of a heterotrimeric G protein.","definition_xrefs":["GOC:cb","GOC:mah","IUPHAR_GPCR:1274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenergic receptor activity","termid":"GO:0004935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"beta-adrenergic receptor activity","synonyms":[{"name":"beta adrenoceptor","type":"exact"}],"termid":"GO:0004939"}


id: GO:0120516
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a diacylglycerol + H2O = a fatty acid + a monoacylglycerol + H+.","definition_xrefs":["RHEA:32731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase activity","termid":"GO:0016298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"diacylglycerol lipase activity","secondary_identifiers":["MetaCyc:RXN-19279"],"termid":"GO:0120516"}


id: GO:1900549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving N',N'',N'''-triacetylfusarinine C.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"N',N'',N'''-triacetylfusarinine C metabolic process","synonyms":[{"name":"N',N'',N'''-triacetylfusarinine C metabolism","type":"exact"}],"termid":"GO:1900549"}


id: MONDO:0005032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, encapsulated tumor, arising from the follicular cells of the thyroid gland. It may be associated with thyroid hormone secretion but it does not have malignant characteristics.","definition_xrefs":["NCIT:C3502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"benign thyroid gland neoplasm","termid":"MONDO:0006107"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follicular thyroid adenoma","secondary_identifiers":["HP:0000854","SCTID:255033000","DOID:2891","ICDO:8330/0","SCTID:255034006","EFO:0000499","DOID:6204"],"synonyms":[{"name":"adenoma of the thyroid","type":"exact"},{"name":"adenoma of the thyroid gland","type":"exact"},{"name":"adenoma of thyroid","type":"exact"},{"name":"adenoma of thyroid gland","type":"exact"},{"name":"adenoma, follicular cell, benign","type":"exact"},{"name":"follicular adenoma","type":"exact"},{"name":"follicular adenoma (morphologic abnormality)","type":"exact"},{"name":"follicular adenoma of the thyroid","type":"exact"},{"name":"follicular adenoma of the thyroid gland","type":"exact"},{"name":"follicular adenoma of thyroid","type":"exact"},{"name":"follicular adenoma of thyroid gland","type":"exact"},{"name":"follicular thyroid adenoma","type":"exact"},{"name":"thyroid adenoma","type":"exact"},{"name":"thyroid adenoma (disease)","type":"exact"},{"name":"thyroid follicle adenoma","type":"exact"},{"name":"thyroid follicular adenoma","type":"exact"},{"name":"thyroid gland adenoma","type":"exact"},{"name":"thyroid gland follicular adenoma","type":"exact"}],"termid":"MONDO:0005032","xrefs":{"Monarch":{"xref_id":"0005032"}}}


id: GO:0034447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a very-low-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle clearance","termid":"GO:0034381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"very-low-density lipoprotein particle clearance","secondary_identifiers":["Reactome:R-HSA-8964046"],"synonyms":[{"name":"VLDL clearance","type":"exact"}],"termid":"GO:0034447"}


id: PBO:0078976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon GCT) 4-1","termid":"PBO:0078976"}


id: GO:0033968
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (7R)-7-(4-carboxybutanamido)cephalosporanate + H2O = (7R)-7-aminocephalosporanate + glutarate.","definition_xrefs":["EC:3.5.1.93"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"glutaryl-7-aminocephalosporanic-acid acylase activity","secondary_identifiers":["MetaCyc:3.5.1.93-RXN","RHEA:23508"],"synonyms":[{"name":"(7R)-7-(4-carboxybutanamido)cephalosporanate amidohydrolase activity","type":"related"},{"name":"7beta-(4-carboxybutanamido)cephalosporanic acid acylase activity","type":"related"},{"name":"CA","type":"related"},{"name":"GA","type":"related"},{"name":"GCA","type":"related"},{"name":"GL-7-ACA acylase activity","type":"related"},{"name":"cephalosporin C acylase activity","type":"related"},{"name":"cephalosporin acylase activity","type":"related"},{"name":"glutaryl-7-ACA acylase activity","type":"related"},{"name":"glutaryl-7-aminocephalosporanic acid acylase activity","type":"related"}],"termid":"GO:0033968"}


id: PBO:0109038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP69 pseudogene 1","termid":"PBO:0109038"}


id: GO:1903019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glycoprotein metabolic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23544079","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"is_a","term_name":"regulation of glycoprotein metabolic process","termid":"GO:1903018"},{"relation_name":"negatively_regulates","term_name":"glycoprotein metabolic process","termid":"GO:0009100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glycoprotein metabolic process","synonyms":[{"name":"down regulation of glycoprotein metabolic process","type":"exact"},{"name":"down regulation of glycoprotein metabolism","type":"exact"},{"name":"down-regulation of glycoprotein metabolic process","type":"exact"},{"name":"down-regulation of glycoprotein metabolism","type":"exact"},{"name":"downregulation of glycoprotein metabolic process","type":"exact"},{"name":"downregulation of glycoprotein metabolism","type":"exact"},{"name":"inhibition of glycoprotein metabolic process","type":"narrow"},{"name":"inhibition of glycoprotein metabolism","type":"narrow"},{"name":"negative regulation of glycoprotein metabolism","type":"exact"}],"termid":"GO:1903019"}


id: FYPO:0006303
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the actomyosin contractile ring is decreased, and some of the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah","PMID:1903478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to actomyosin contractile ring","termid":"FYPO:0002699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0000032","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to actomyosin contractile ring, with protein mislocalized to cytoplasm","synonyms":[{"name":"decreased protein localisation to actomyosin contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"decreased protein localization to actomyosin contractile ring, with protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to actomyosin contractile ring, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"decreased protein localization to contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"decreased protein localization to cytokinetic contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"decreased protein localization to mitotic contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"decreased protein recruitment to actomyosin contractile ring, with protein mislocalized to cytoplasm","type":"related"},{"name":"reduced protein localization to actomyosin contractile ring, with protein mislocalized to cytoplasm","type":"exact"}],"termid":"FYPO:0006303"}


id: PBO:0004802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM-associated protein Mcm10","termid":"PBO:0004802"}


id: PBO:0061044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPA2 pseudogene 5","termid":"PBO:0061044"}


id: GO:0006821
data:
  {"annotated_genes":["SJAG_01168","SJAG_03401","SJAG_02463"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105192,109612,111154,99841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902476"}]},"cv_name":"biological_process","definition":"The directed movement of chloride into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion transport","termid":"GO:0006820"},{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01168":null,"SJAG_02463":null,"SJAG_03401":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"chloride transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006821","terms_by_termid":{"GO:1902476":null}}


id: PBO:0067721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 19","termid":"PBO:0067721"}


id: PR:Q10483
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UBX domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17C9.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.11c","secondary_identifiers":["UniProtKB:Q10483"],"synonyms":[{"name":"Spom972h-UBXN1","type":"exact"}],"termid":"PR:Q10483"}


id: PBO:0079683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3D","termid":"PBO:0079683"}


id: GO:0034782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dimethylmalonate + H+ = isobutyrate + CO2.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete dimethylmalonate decarboxylase activity (obsolete GO:0034782)","termid":"GO:0034782"}


id: GO:0086099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An angiotensin-mediated signaling pathway that contributes to a circulatory system process carried out by the heart, where the activated receptor transmits the signal via Gq-mediated activation of phospholipase C (PLC). PLC hydrolyses phosphatidylinositol 4,5-bisphosphate (PIP2) into the second messengers inositol-1,4,5,-triphosphate (IP3) and diacylglycerol (DAG). DAG activates protein kinase C (PKC), whilst IP3 binds intracellular receptors to induce the release of Ca2+ from intracellular stores.","definition_xrefs":["PMID:17376402","GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C-activating angiotensin-activated signaling pathway","termid":"GO:0086097"},{"relation_name":"is_a","term_name":"angiotensin-activated signaling pathway involved in heart process","termid":"GO:0086098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phospholipase C-activating angiotensin-activated signaling pathway involved in heart process","synonyms":[{"name":"Gq-coupled angiotensin receptor signaling pathway involved in heart process","type":"exact"},{"name":"PLC-activating angiotensin receptor signaling pathway involved in heart process","type":"exact"},{"name":"angiotensin receptor signaling pathway via activation of phospholipase C involved in heart process","type":"exact"},{"name":"cardiac angiotensin receptor signaling pathway via activation of PLC","type":"exact"},{"name":"phospholipase C-activating angiotensin-mediated signaling pathway involved in heart process","type":"related"}],"termid":"GO:0086099"}


id: PBO:0075670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase long chain base subunit 1 pseudogene 5","termid":"PBO:0075670"}


id: GO:0070218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of sulfide ions within an organism or cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete sulfide ion homeostasis (obsolete GO:0070218)","synonyms":[{"name":"sulfide generation","type":"related"},{"name":"sulfide homeostasis","type":"exact"},{"name":"sulfide production","type":"related"},{"name":"sulphide generation","type":"related"},{"name":"sulphide homeostasis","type":"exact"},{"name":"sulphide ion homeostasis","type":"exact"},{"name":"sulphide production","type":"related"}],"termid":"GO:0070218"}


id: GO:0045039
data:
  {"annotated_genes":["SJAG_03515","SJAG_01949","SJAG_04996","SJAG_01640","SJAG_00404","SJAG_02524","SJAG_04208","SJAG_03502","SJAG_01120","SJAG_00687","SJAG_02398"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88133,89870,92267,98928,102423,106786,107000,107057,107079,112690,115765],"is_not":false,"summary":null,"term":"GO:0045039"}]},"cv_name":"biological_process","definition":"The processes mediating the insertion of proteins into the mitochondrial inner membrane. Mitochondrial inner membrane proteins can get inserted from the cytosol, by crossing the outer membrane and being guided by an inner membrane translocase complex into their final destination in the inner membrane. Some proteins present in the intermembrane space can get inserted into the inner mitochondrial membrane. Finally, some proteins are inserted into the inner membrane from the matrix side of the membrane.","definition_xrefs":["GOC:vw","GOC:mcc","PMID:18672008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial transport","termid":"GO:0006839"},{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"inner mitochondrial membrane organization","termid":"GO:0007007"},{"relation_name":"is_a","term_name":"establishment of protein localization to mitochondrial membrane","termid":"GO:0090151"},{"relation_name":"part_of","term_name":"protein targeting to mitochondrion","termid":"GO:0006626"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00404":null,"SJAG_00687":null,"SJAG_01120":null,"SJAG_01640":null,"SJAG_01949":null,"SJAG_02398":null,"SJAG_02524":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_04208":null,"SJAG_04996":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0007005","GO:0006605","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"protein insertion into mitochondrial inner membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial inner membrane protein import","type":"exact"},{"name":"protein import into mitochondrial inner membrane","type":"exact"},{"name":"protein transport into mitochondrial inner membrane","type":"exact"}],"termid":"GO:0045039","terms_by_termid":{"GO:0045039":null}}


id: GO:0140381
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 S-adenosyl-L-methionine (SAM) + 4-hydroxytryptamine 4-phosphate (norbaeocystin) = 2 S-adenosyl-L-homocysteine + psilocybin.","definition_xrefs":["PMID:28763571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-hydroxytryptamine 4-phosphate methyltransferase activity","secondary_identifiers":["EC:2.1.1.345","RHEA:55568"],"synonyms":[{"name":"norbaeocystin methyltransferase","type":"exact"},{"name":"psilocybin synthase","type":"exact"}],"termid":"GO:0140381"}


id: MONDO:0000133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The Immunodeficiency, Centromeric region instability, Facial anomalies syndrome (ICF) is a rare autosomal recessive disease characterized by immunodeficiency, although B cells are present, and by characteristic rearrangements in the vicinity of the centromeres (the juxtacentromeric heterochromatin) of chromosomes 1 and 16 and sometimes 9.","definition_xrefs":["Orphanet:2268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"telomere syndrome","termid":"MONDO:0100137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0006025"],"is_obsolete":false,"name":"immunodeficiency-centromeric instability-facial anomalies syndrome","secondary_identifiers":["MESH:C537362","MEDGEN:140770","GARD:2945","SCTID:234633000","NANDO:1200334","DOID:0090007","NANDO:2200708","UMLS:C0398788","OMIMPS:242860"],"synonyms":[{"name":"CIID","type":"related"},{"name":"ICF syndrome","type":"related"},{"name":"immunodeficiency-centromeric instability-facial anomalies","type":"exact"},{"name":"immunodeficiency-centromeric instability-facial anomalies syndrome","type":"exact"}],"termid":"MONDO:0000133","xrefs":{"Monarch":{"xref_id":"0000133"}}}


id: GO:0004308
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)-glycosidic linkages of terminal sialic residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates.","definition_xrefs":["EC:3.2.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-sialidase activity","termid":"GO:0016997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"exo-alpha-sialidase activity","secondary_identifiers":["Reactome:R-HSA-1605724","Reactome:R-HSA-4085029","Reactome:R-HSA-1605723","Reactome:R-HSA-168870","Reactome:R-HSA-1605768","Reactome:R-HSA-4084994","Reactome:R-HSA-4084999","Reactome:R-HSA-4341669","MetaCyc:3.2.1.18-RXN","Reactome:R-HSA-9638120"],"synonyms":[{"name":"N-acylneuraminate glycohydrolase activity","type":"related"},{"name":"acetylneuraminidase activity","type":"related"},{"name":"acetylneuraminyl hydrolase activity","type":"related"},{"name":"alpha-neuraminidase activity","type":"related"},{"name":"neuraminidase activity","type":"related"},{"name":"sialidase activity","type":"related"}],"termid":"GO:0004308"}


id: MONDO:1012439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ear necrosis syndrome, non-human animal","termid":"MONDO:1011709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ear necrosis syndrome, pig","secondary_identifiers":["OMIA:001711-9823"],"termid":"MONDO:1012439","xrefs":{"Monarch":{"xref_id":"1012439"}}}


id: PBO:0073382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET binding protein 1","termid":"PBO:0073382"}


id: GO:0044037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving macromolecules forming, or destined to form, part of a cell wall, involving more than one organism. A cell wall is a rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis.","definition_xrefs":["GOC:mah","GOC:tair_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism cell wall macromolecule metabolic process (obsolete GO:0044037)","synonyms":[{"name":"multi-organism cell wall macromolecule metabolism","type":"exact"}],"termid":"GO:0044037"}


id: PBO:0073351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 10","termid":"PBO:0073351"}


id: PBO:0027972
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_succinate_dehydrogenase_(ubiquinone)_activity","termid":"PBO:0027972"}


id: GO:1904216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein import into chloroplast stroma.","definition_xrefs":["GOC:TermGenie","PMID:25901327","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of protein transport","termid":"GO:0051222"},{"relation_name":"is_a","term_name":"regulation of protein import into chloroplast stroma","termid":"GO:1904215"},{"relation_name":"positively_regulates","term_name":"protein import into chloroplast stroma","termid":"GO:0045037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of protein import into chloroplast stroma","synonyms":[{"name":"activation of chloroplast stroma protein import","type":"narrow"},{"name":"activation of protein import into chloroplast stroma","type":"narrow"},{"name":"activation of protein transport into chloroplast stroma","type":"narrow"},{"name":"positive regulation of chloroplast stroma protein import","type":"exact"},{"name":"positive regulation of protein transport into chloroplast stroma","type":"exact"},{"name":"up regulation of chloroplast stroma protein import","type":"exact"},{"name":"up regulation of protein import into chloroplast stroma","type":"exact"},{"name":"up regulation of protein transport into chloroplast stroma","type":"exact"},{"name":"up-regulation of chloroplast stroma protein import","type":"exact"},{"name":"up-regulation of protein import into chloroplast stroma","type":"exact"},{"name":"up-regulation of protein transport into chloroplast stroma","type":"exact"},{"name":"upregulation of chloroplast stroma protein import","type":"exact"},{"name":"upregulation of protein import into chloroplast stroma","type":"exact"},{"name":"upregulation of protein transport into chloroplast stroma","type":"exact"}],"termid":"GO:1904216"}


id: PBO:0081716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 644","termid":"PBO:0081716"}


id: PBO:0065702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p53 upregulated regulator of p53 levels","termid":"PBO:0065702"}


id: PBO:0057972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3689d-2","termid":"PBO:0057972"}


id: MONDO:0014007
data:
  {"annotated_genes":["SJAG_04380"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84752],"is_not":false,"summary":null,"term":"MONDO:0014007"}]},"cv_name":"mondo","definition":"Any Aicardi-Goutieres syndrome in which the cause of the disease is a mutation in the ADAR gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Aicardi-Goutieres syndrome","termid":"MONDO:0018866"},{"relation_name":"is_a","term_name":"ADAR-related type 1 interferonopathy","termid":"MONDO:0700261"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005046","MONDO:0005559"],"is_obsolete":false,"name":"Aicardi-Goutieres syndrome 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:761287","GARD:15894","NANDO:2200898","OMIM:615010","UMLS:C3539013"],"synonyms":[{"name":"ADAR Aicardi-Goutieres syndrome","type":"exact"},{"name":"AGS6","type":"related"},{"name":"Adar Aicardi-Goutieres syndrome","type":"exact"},{"name":"Aicardi-Goutieres syndrome 6","type":"exact"},{"name":"Aicardi-Goutieres syndrome caused by mutation in ADAR","type":"exact"},{"name":"Aicardi-Goutieres syndrome caused by mutation in Adar","type":"exact"},{"name":"Aicardi-Goutieres syndrome type 6","type":"exact"}],"termid":"MONDO:0014007","terms_by_termid":{"MONDO:0014007":null},"xrefs":{"Monarch":{"xref_id":"0014007"}}}


id: GO:1903209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of oxidative stress-induced cell death.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:PARL","GOC:TermGenie","PMID:20969476"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of oxidative stress-induced cell death (obsolete GO:1903209)","synonyms":[{"name":"activation of cell death in response to oxidative stress","type":"narrow"},{"name":"enhancement of oxidative stress-induced cell death","type":"narrow"},{"name":"positive regulation of cell death in response to oxidative stress","type":"exact"},{"name":"up regulation of cell death in response to oxidative stress","type":"exact"},{"name":"up-regulation of cell death in response to oxidative stress","type":"exact"},{"name":"upregulation of cell death in response to oxidative stress","type":"exact"}],"termid":"GO:1903209"}


id: GO:0034454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a microtubule is maintained in a specific location in a cell by attachment to a centrosome.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule anchoring at microtubule organizing center","termid":"GO:0072393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"microtubule anchoring at centrosome","termid":"GO:0034454"}


id: PBO:0003872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosyl-AMP cyclohydrolase/phosphoribosyl- ATP pyrophosphohydrolase His7","termid":"PBO:0003872"}


id: PBO:0066696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ mediated genome instability 2","termid":"PBO:0066696"}


id: FYPO:0007405
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortex of a cell is abnormal, and some of the protein is detected distributed throughout the cell cortex. There may be little or no protein detected at the medial cortex.","definition_xrefs":["PMID:32101481","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mislocalized protein distributed in cell cortex","termid":"FYPO:0006636"},{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortex during vegetative growth","termid":"FYPO:0000731"},{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to medial cortex, with protein distributed in cell cortex, during vegetative growth","synonyms":[{"name":"abnormal protein localisation to medial cortex, with protein distributed in cell cortex, during vegetative growth","type":"exact"},{"name":"abnormal protein localization to medial cortex, with protein distributed in cell cortex, during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to medial ring, with protein distributed in cell cortex, during vegetative growth","type":"exact"}],"termid":"FYPO:0007405"}


id: GO:0070892
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with lipoteichoic acid and transmitting the signal to initiate an innate immune response.","definition_xrefs":["PMID:14665680","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor activity","termid":"GO:0038187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"lipoteichoic acid immune receptor activity","synonyms":[{"name":"lipoteichoic acid receptor activity","type":"broad"}],"termid":"GO:0070892"}


id: MONDO:0021534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low grade neuroendocrine tumor (carcinoid tumor) that arises from the rectum. The mitotic count is less than 2 per 10 HPF and/or the Ki67 index is equal to or less than 2 percent.","definition_xrefs":["NCIT:C5547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colorectal neuroendocrine tumor G1","termid":"MONDO:0006162"},{"relation_name":"is_a","term_name":"rectal neuroendocrine tumor","termid":"MONDO:0015068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"rectal neuroendocrine tumor G1","secondary_identifiers":["MEDGEN:233389","UMLS:C1335678","SCTID:713306000"],"synonyms":[{"name":"carcinoid of rectum","type":"exact"},{"name":"carcinoid of the rectum","type":"exact"},{"name":"carcinoid tumor of rectum","type":"exact"},{"name":"carcinoid tumor of the rectum","type":"exact"},{"name":"carcinoid tumour of rectum","type":"exact"},{"name":"carcinoid tumour of the rectum","type":"exact"},{"name":"grade 1 neuroendocrine neoplasm of rectum","type":"exact"},{"name":"rectal NET G1","type":"exact"},{"name":"rectal carcinoid","type":"exact"},{"name":"rectal carcinoid tumor","type":"exact"},{"name":"rectal carcinoid tumour","type":"exact"},{"name":"rectal neuroendocrine tumor G1","type":"exact"},{"name":"rectum NET G1","type":"exact"},{"name":"rectum carcinoid tumor","type":"exact"},{"name":"rectum carcinoid tumor (disease)","type":"exact"},{"name":"rectum carcinoid tumour","type":"exact"},{"name":"rectum carcinoid tumour (disease)","type":"exact"},{"name":"rectum neuroendocrine neoplasm G1","type":"exact"},{"name":"rectum neuroendocrine tumor, well differentiated, low grade","type":"exact"}],"termid":"MONDO:0021534","xrefs":{"Monarch":{"xref_id":"0021534"}}}


id: MOD:00244
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-serine residue to form L-cysteine oxazoline-4-carboxylic acid.","definition_xrefs":["RESID:AA0239","PubMed:1880060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues (Ser)","termid":"MOD:01421"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteine oxazoline-4-carboxylic acid","synonyms":[{"name":"(4S)-2-[(1R)-1-amino-2-sulfanylethyl]-4,5-dihydro-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-sulfanylethyl]-4,5-dihydro-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Oxazoline-4-carboxylic acid (Cys-Ser)","type":"exact"},{"name":"L-cysteine oxazoline-4-carboxylic acid","type":"exact"}],"termid":"MOD:00244"}


id: GO:0003242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenic growth in which the chambers of the heart expand in size, contributing to their shaping.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth involved in heart morphogenesis","termid":"GO:0003241"},{"relation_name":"part_of","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac chamber ballooning","termid":"GO:0003242"}


id: GO:0045114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta 2 integrins, a subfamily of integrins which contain the beta 2 subunit.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin biosynthetic process","termid":"GO:0045112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"beta 2 integrin biosynthetic process","synonyms":[{"name":"beta 2 integrin anabolism","type":"exact"},{"name":"beta 2 integrin biosynthesis","type":"exact"},{"name":"beta 2 integrin formation","type":"exact"},{"name":"beta 2 integrin synthesis","type":"exact"}],"termid":"GO:0045114"}


id: GO:0045219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of FasL.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycoprotein biosynthetic process","termid":"GO:0010559"},{"relation_name":"regulates","term_name":"FasL biosynthetic process","termid":"GO:0045210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of FasL production","synonyms":[{"name":"regulation of FasL anabolism","type":"exact"},{"name":"regulation of FasL biosynthesis","type":"exact"},{"name":"regulation of FasL formation","type":"exact"},{"name":"regulation of FasL synthesis","type":"exact"}],"termid":"GO:0045219"}


id: MONDO:0017610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epidermolysis bullosa simplex (EBS) is a group of hereditary epidermolysis bullosa (HEB) disorders characterized by skin fragility resulting in intraepidermal blisters and erosions that occur either spontaneously or after physical trauma.","definition_xrefs":["Orphanet:304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited epidermolysis bullosa","termid":"MONDO:0019276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex","secondary_identifiers":["NANDO:2201341","ICD10CM:Q81.0","NCIT:C84692","OMIMPS:131760","DOID:4644","UMLS:C0079298","ICD9:757.39","MESH:D016110","NANDO:2201375","SCTID:67144006","GARD:10752","MEDGEN:86896","NANDO:1200235","icd11.foundation:1860717527"],"synonyms":[{"name":"EBS","type":"exact"},{"name":"EEB","type":"exact"},{"name":"epidermolysis bullosa intraepidermic","type":"related"},{"name":"epidermolysis bullosa simplex","type":"exact"}],"termid":"MONDO:0017610","xrefs":{"Monarch":{"xref_id":"0017610"}}}


id: PBO:0057012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 103a-1","termid":"PBO:0057012"}


id: MONDO:0030037
data:
  {"annotated_genes":["SJAG_03672"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84892],"is_not":false,"summary":null,"term":"MONDO:0030037"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"},{"relation_name":"is_a","term_name":"disorder of GPI anchor biosynthesis","termid":"MONDO:0024321"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03672":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0024322","MONDO:0002525","MONDO:0005066","MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia and cerebellar atrophy, with or without seizures","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5394372","MEDGEN:1710849","OMIM:618879"],"synonyms":[{"name":"Glycosylphosphatidylinositol Biosynthesis Defect 22","type":"exact"},{"name":"NEDHCAS","type":"exact"},{"name":"NEURODEVELOPMENTAL DISORDER WITH HYPOTONIA AND CEREBELLAR ATROPHY, WITH OR WITHOUT SEIZURES","type":"exact"},{"name":"neurodevelopmental disorder with hypotonia and cerebellar atrophy, with or without seizures","type":"exact"}],"termid":"MONDO:0030037","terms_by_termid":{"MONDO:0030037":null},"xrefs":{"Monarch":{"xref_id":"0030037"}}}


id: PBO:0040019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 8","termid":"PBO:0040019"}


id: GO:0017108
data:
  {"annotated_genes":["SJAG_01832","SJAG_05237","SJAG_04183","SJAG_01648","SJAG_03994","SJAG_01173"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87871,96617,100671,102699,103663,107247],"is_not":false,"summary":null,"term":"GO:0017108"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of a 5' flap structure in DNA, but not other DNA structures; processes the 5' ends of Okazaki fragments in lagging strand DNA synthesis.","definition_xrefs":["PMID:9778254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endodeoxyribonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016888"},{"relation_name":"is_a","term_name":"flap endonuclease activity","termid":"GO:0048256"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01173":null,"SJAG_01648":null,"SJAG_01832":null,"SJAG_03994":null,"SJAG_04183":null,"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0140097","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"5'-flap endonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5651782","Reactome:R-HSA-69152","Reactome:R-HSA-174441","Reactome:R-HSA-9914870","Reactome:R-HSA-5687664","Reactome:R-HSA-110363","Reactome:R-HSA-174446"],"synonyms":[{"name":"5' flap endonuclease activity","type":"exact"}],"termid":"GO:0017108","terms_by_termid":{"GO:0017108":null}}


id: FYECO:0000135
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"The assay, or growth of cells, was conducted under semi-anaerobic conditions, where the level of oxygen is lower than normal.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semi-aerobic environment","synonyms":[{"name":"hypoxia","type":"related"},{"name":"hypoxic environment","type":"related"},{"name":"limited O atoms","type":"related"},{"name":"limited oxygen","type":"related"},{"name":"reduced oxygen level","type":"related"},{"name":"semi aerobic environment","type":"exact"},{"name":"semi-anaerobic environment","type":"exact"},{"name":"semiaerobic environment","type":"exact"},{"name":"semianaerobic environment","type":"exact"}],"termid":"FYECO:0000135"}


id: PBO:0052174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNK4-CATSPERZ readthrough (NMD candidate)","termid":"PBO:0052174"}


id: MONDO:0054729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 25","secondary_identifiers":["GARD:16274","UMLS:C4693765","DOID:0111920","OMIM:617960","MEDGEN:1646677"],"synonyms":[{"name":"SPGF25","type":"related"},{"name":"spermatogenic failure 25","type":"exact"}],"termid":"MONDO:0054729","xrefs":{"Monarch":{"xref_id":"0054729"}}}


id: PBO:0113467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the tRNA splicing endonuclease; tRNA splicing endonuclease (Sen complex) is composed of Sen2p, Sen15p, Sen34p, and Sen54p; Sen complex also cleaves the CBP1 mRNA at the mitochondrial surface; Sen2p contains the active site for tRNA 5' splice site cleavage and has similarity to Sen34p and to Archaeal tRNA splicing endonuclease; localizes to the peroxisome in a Pex5p-dependent manner in oleate","termid":"PBO:0113467"}


id: MONDO:0003910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma arising from the choroid, ciliary body, or the iris. It is characterized by the presence of a mixture of spindle A melanoma cells, spindle B melanoma cells, and epithelioid melanoma cells.","definition_xrefs":["NCIT:C35781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uveal melanoma","termid":"MONDO:0006486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"mixed cell uveal melanoma","secondary_identifiers":["UMLS:C1334782","MEDGEN:235330","EFO:1000380","DOID:6522"],"synonyms":[{"name":"mixed cell uveal melanoma","type":"exact"}],"termid":"MONDO:0003910","xrefs":{"Monarch":{"xref_id":"0003910"}}}


id: PBO:0111842
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab subfamily","termid":"PBO:0111842"}


id: PBO:0080393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS26A pseudogene 1","termid":"PBO:0080393"}


id: PBO:0075019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-30","termid":"PBO:0075019"}


id: GO:0098778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The secretion of soluble curli subunits through the outer membrane, coupled to nucleation of curli fiber formation at the membrane surface.","definition_xrefs":["PMID:24080089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion by the type VIII secretion system","termid":"GO:0098777"},{"relation_name":"part_of","term_name":"curli assembly","termid":"GO:0098775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"curli subunit secretion coupled to curli assembly","synonyms":[{"name":"extracellular nucleation-precipitation pathway","type":"exact"}],"termid":"GO:0098778"}


id: GO:0035908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the ventral aorta over time, from its initial formation to the mature structure. The ventral aorta is a blood vessel in a single-pass circulatory system that carries de-oxygenated blood from the heart to the gills. In a single-pass circulatory system blood passes once through the heart to supply the body once.","definition_xrefs":["UBERON:0003085","GOC:bf","GOC:dgh","Wikipedia:Aorta","ZFA:0000604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aorta development","termid":"GO:0035904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral aorta development","termid":"GO:0035908"}


id: GO:1901627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of postsynaptic membrane organization.","definition_xrefs":["PMID:22426000","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of postsynaptic membrane organization","termid":"GO:1901626"},{"relation_name":"is_a","term_name":"negative regulation of synapse organization","termid":"GO:1905809"},{"relation_name":"negatively_regulates","term_name":"postsynaptic membrane organization","termid":"GO:0001941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"negative regulation of postsynaptic membrane organization","synonyms":[{"name":"down regulation of postsynaptic membrane organisation","type":"exact"},{"name":"down regulation of postsynaptic membrane organization","type":"exact"},{"name":"down-regulation of postsynaptic membrane organisation","type":"exact"},{"name":"down-regulation of postsynaptic membrane organization","type":"exact"},{"name":"downregulation of postsynaptic membrane organisation","type":"exact"},{"name":"downregulation of postsynaptic membrane organization","type":"exact"},{"name":"inhibition of postsynaptic membrane organisation","type":"narrow"},{"name":"inhibition of postsynaptic membrane organization","type":"narrow"},{"name":"negative regulation of post-synaptic membrane organization","type":"exact"},{"name":"negative regulation of postsynaptic membrane organisation","type":"exact"}],"termid":"GO:1901627"}


id: PBO:0070598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 65","termid":"PBO:0070598"}


id: PBO:0071380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 3","termid":"PBO:0071380"}


id: MONDO:0005827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare syndrome characterized by almost complete absence of body fat, accentuated muscularity, insulin-resistant diabetes, hyperlipidemia, hepatomegaly, and hypermetabolism.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type 2 diabetes mellitus","termid":"MONDO:0005148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005015","MONDO:0005066"],"is_obsolete":false,"name":"lipoatrophic diabetes","secondary_identifiers":["SCTID:127012008","UMLS:C0011859","NANDO:2200465","SCTID:71325002","MEDGEN:4256","DOID:11712","EFO:0007346","MESH:D003923","NCIT:C34537"],"synonyms":[{"name":"diabete, lipoatrophic","type":"exact"},{"name":"diabetes, lipoatrophic","type":"related"},{"name":"lipoatrophic diabete","type":"related"},{"name":"lipoatrophic diabetes","type":"exact"},{"name":"lipoatrophic diabetes mellitus","type":"related"}],"termid":"MONDO:0005827","xrefs":{"Monarch":{"xref_id":"0005827"}}}


id: MONDO:0035660
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GNAO1-related developmental delay-seizures-movement disorder spectrum","secondary_identifiers":["UMLS:C5680303","Orphanet:592564","ICD10CM:F84.8","GARD:22369","MEDGEN:1830103"],"synonyms":[{"name":"GNAO1-related spectrum","type":"exact"}],"termid":"MONDO:0035660","xrefs":{"Monarch":{"xref_id":"0035660"}}}


id: GO:0033036
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id: MONDO:0859184
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventriculomegaly and arthrogryposis","secondary_identifiers":["MEDGEN:1794183","OMIM:619501","UMLS:C5561973"],"termid":"MONDO:0859184","xrefs":{"Monarch":{"xref_id":"0859184"}}}


id: PBO:0079419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta pseudogene 2","termid":"PBO:0079419"}


id: PBO:0038934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase 1B (class I), beta polypeptide","termid":"PBO:0038934"}


id: PBO:0088847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor EF2/EF3 lysine methyltransferase Efm2/Rgg1","termid":"PBO:0088847"}


id: PBO:0004494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTR family peptide transporter (predicted)","termid":"PBO:0004494"}


id: FYPO:0004496
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is smaller than normal and contains more than one septum, when the cell is in a culture in stationary phase.","definition_xrefs":["PMID:8292390","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell","termid":"FYPO:0000023"},{"relation_name":"is_a","term_name":"multiseptate cell","termid":"FYPO:0004295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"small multiseptate cell during stationary phase","termid":"FYPO:0004496"}


id: GO:0110131
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex that localizes to actin cortical patches at sites of endocytosis and negatively regulates barbed end F-actin assembly, resulting in the generation of free actin pools. The Aim21-Tda2 complex is necessary for efficient endocytosis and balancing the distribution of actin between patches and cables.","definition_xrefs":["GOC:rn","PMID:28706108","PMID:29467252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"actin cortical patch","termid":"GO:0030479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0030479"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0015629","GO:0005737","GO:0005938","GO:0032991","GO:0030479","GO:0005575"],"is_obsolete":false,"name":"Aim21-Tda2 complex","synonyms":[{"name":"Aim21/Tda2 complex","type":"exact"}],"termid":"GO:0110131"}


id: PBO:0068875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 115, pseudogene","termid":"PBO:0068875"}


id: GO:0010312
data:
  {"annotated_genes":["SJAG_01078","SJAG_01803"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93249,93250],"is_not":false,"summary":null,"term":"GO:0010312"}]},"cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of zinc ion. These include transport of zinc away from sensitive areas and to compartments or complexes whose purpose is sequestration of zinc ion.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification of inorganic compound","termid":"GO:0061687"},{"relation_name":"part_of","term_name":"stress response to zinc ion","termid":"GO:1990359"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01078":null,"SJAG_01803":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"detoxification of zinc ion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010312","terms_by_termid":{"GO:0010312":null}}


id: GO:0015593
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of allose from one side of a membrane to the other. Allose is an aldohexose similar to glucose, differing only in the configuration of the hydroxyl group of C-3.","definition_xrefs":["GOC:mtg_transport","GOC:ai","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete allose transmembrane transporter activity (obsolete GO:0015593)","termid":"GO:0015593"}


id: GO:0102068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1E,4E,8E)-alpha-humulene + NADPH + O2 + H+ = 10-hydroxy-alpha-humulene + NADP + H2O.","definition_xrefs":["EC:1.14.14.113","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"alpha-humulene 10-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-10628","RHEA:32491"],"termid":"GO:0102068"}


id: PBO:0040837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BIVM-ERCC5 readthrough","termid":"PBO:0040837"}


id: PBO:0043910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytokine receptor like factor 3","termid":"PBO:0043910"}


id: MONDO:0013930
data:
  {"annotated_genes":["SJAG_02997"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86708],"is_not":false,"summary":null,"term":"MONDO:0013930"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"peroxisome biogenesis disorder","termid":"MONDO:0019234"},{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX6 defect","termid":"MONDO:0100263"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02997":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005244","MONDO:0005559","MONDO:0005066","MONDO:0019053"],"is_obsolete":false,"name":"peroxisome biogenesis disorder 4A (Zellweger)","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080479","UMLS:C3553936","OMIM:614862","GARD:15859","MESH:C563301","MEDGEN:766850","NCIT:C155754"],"synonyms":[{"name":"PBD4A","type":"related"},{"name":"classic peroxisome biogenesis disorder","type":"exact"},{"name":"peroxisome biogenesis disorder 4A (Zellweger)","type":"exact"},{"name":"peroxisome biogenesis disorder, complementation group 4","type":"related"},{"name":"peroxisome biogenesis disorder, complementation group 6","type":"related"},{"name":"peroxisome biogenesis disorder, complementation group C","type":"related"}],"termid":"MONDO:0013930","terms_by_termid":{"MONDO:0013930":null},"xrefs":{"Monarch":{"xref_id":"0013930"}}}


id: PBO:0079383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 1 class VI pseudogene 1","termid":"PBO:0079383"}


id: MONDO:0015854
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"breast disorder","termid":"MONDO:0002657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supernumerary breasts","secondary_identifiers":["GARD:20195","UMLS:C0266010","MEDGEN:78583","MedDRA:10049786","icd11.foundation:1458532658","Orphanet:180182"],"synonyms":[{"name":"accessory breasts","type":"exact"},{"name":"polymastia","type":"exact"}],"termid":"MONDO:0015854","xrefs":{"Monarch":{"xref_id":"0015854"}}}


id: FYECO:0000323
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were cold shocked followed by recovery at a temperature range higher than normal for standard pombe growth.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cold shock and recovery at high temperature","termid":"FYECO:0000323"}


id: PBO:0109105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial UbiB/ABC kinase -like family membrane protein implicted in mitochondrial ergosterol and phospholipid homeostasis Cqd2","termid":"PBO:0109105"}


id: PBO:0054863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2277","termid":"PBO:0054863"}


id: PBO:0069863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1150, pseudogene","termid":"PBO:0069863"}


id: MOD:00240
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 4-hydroxy-L-lysine.","definition_xrefs":["PubMed:4005040","RESID:AA0235","ChEBI:141495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated lysine","termid":"MOD:01047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-hydroxy-L-lysine","synonyms":[{"name":"(2S,4R)-2,6-diamino-4-hydroxyhexanoic acid","type":"exact"},{"name":"4-hydroxy-L-lysine","type":"exact"},{"name":"4-hydroxylated L-lysine","type":"exact"},{"name":"4HyLys","type":"exact"},{"name":"L-threo-gamma-hydroxylysine","type":"exact"},{"name":"MOD_RES 4-hydroxylysine","type":"exact"},{"name":"alpha,epsilon-diamino-gamma-hydroxycaproic acid","type":"exact"}],"termid":"MOD:00240"}


id: PBO:0075938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 and cysteine rich domain","termid":"PBO:0075938"}


id: GO:0032227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of dopaminergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter dopamine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic transmission, dopaminergic","termid":"GO:0032225"},{"relation_name":"is_a","term_name":"negative regulation of synaptic transmission","termid":"GO:0050805"},{"relation_name":"negatively_regulates","term_name":"synaptic transmission, dopaminergic","termid":"GO:0001963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of synaptic transmission, dopaminergic","synonyms":[{"name":"down regulation of synaptic transmission, dopaminergic","type":"exact"},{"name":"down-regulation of synaptic transmission, dopaminergic","type":"exact"},{"name":"downregulation of synaptic transmission, dopaminergic","type":"exact"},{"name":"inhibition of synaptic transmission, dopaminergic","type":"narrow"}],"termid":"GO:0032227"}


id: GO:1901198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any positive regulation of calcium ion transport into cytosol that is involved in cellular response to calcium ion.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion transport into cytosol","termid":"GO:0010524"},{"relation_name":"part_of","term_name":"cellular response to calcium ion","termid":"GO:0071277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of calcium ion transport into cytosol involved in cellular response to calcium ion","synonyms":[{"name":"positive regulation of calcium ion transport into cytosol involved in cellular response to Ca2+ ion","type":"exact"}],"termid":"GO:1901198"}


id: PBO:0054385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1781","termid":"PBO:0054385"}


id: PBO:0060319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myomixer, myoblast fusion factor","termid":"PBO:0060319"}


id: PBO:0047896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(7)(p14.2)","termid":"PBO:0047896"}


id: PBO:0048321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 32","termid":"PBO:0048321"}


id: MOD:01027
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-amyloxycarbonyl","synonyms":[{"name":"Aoc","type":"exact"}],"termid":"MOD:01027"}


id: GO:0015882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which L-ascorbic acid is transported across a lipid bilayer, from one side of a membrane to the other. L-ascorbate, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate, is vitamin C and has co-factor and anti-oxidant activities in many species.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide transmembrane transport","termid":"GO:0015749"},{"relation_name":"is_a","term_name":"vitamin transmembrane transport","termid":"GO:0035461"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"L-ascorbic acid transmembrane transport","synonyms":[{"name":"L-ascorbate transport","type":"exact"},{"name":"L-ascorbic acid transport","type":"related"},{"name":"vitamin C transport","type":"exact"}],"termid":"GO:0015882"}


id: MONDO:1011633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive ataxia, non-human animal","secondary_identifiers":["OMIA:001091"],"termid":"MONDO:1011633","xrefs":{"Monarch":{"xref_id":"1011633"}}}


id: PATO:0001113
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001113 absolute energy value (obsolete PATO:0001113)","termid":"PATO:0001113"}


id: PBO:0075332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorbin and SH3 domain containing 1","termid":"PBO:0075332"}


id: MONDO:0011215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteocraniostenosis is a lethal skeletal dysplasia characterized by a cloverleaf skull anomaly, facial dysmorphism, limb shortness, splenic hypo/aplasia and radiological anomalies including thin tubular bones with flared metaphyses and deficient calvarial mineralization.","definition_xrefs":["Orphanet:2763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteocraniostenosis","secondary_identifiers":["MESH:C537291","SCTID:722109008","ICD10CM:Q78.0","icd11.foundation:539409723","MEDGEN:356331","GARD:3396","OMIM:602361","UMLS:C1865639"],"synonyms":[{"name":"GCLEB","type":"related"},{"name":"Habrodysplasia","type":"related"},{"name":"Osteocraniosplenic syndrome","type":"exact"},{"name":"gracile bone dysplasia","type":"exact"},{"name":"osteocraniostenosis","type":"exact"},{"name":"skeletal dysplasia lethal with gracile bones","type":"related"},{"name":"skeletal dysplasia, lethal, with gracile bones","type":"related"}],"termid":"MONDO:0011215","xrefs":{"Monarch":{"xref_id":"0011215"}}}


id: GO:1901786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of p-cresol.","definition_xrefs":["GOC:TermGenie","PMID:10623531","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"p-cresol metabolic process","termid":"GO:1901784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"p-cresol biosynthetic process","synonyms":[{"name":"p-cresol anabolism","type":"exact"},{"name":"p-cresol biosynthesis","type":"exact"},{"name":"p-cresol formation","type":"exact"},{"name":"p-cresol synthesis","type":"exact"}],"termid":"GO:1901786"}


id: MONDO:0000715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A adenoid cystic carcinoma that involves the lymph node.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymph node cancer","termid":"MONDO:0001082"},{"relation_name":"is_a","term_name":"adenoid cystic carcinoma","termid":"MONDO:0004971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"lymph node adenoid cystic carcinoma","secondary_identifiers":["DOID:0060219"],"synonyms":[{"name":"lymph node adenoid cystic cancer","type":"related"},{"name":"lymph node adenoid cystic carcinoma","type":"exact"}],"termid":"MONDO:0000715","xrefs":{"Monarch":{"xref_id":"0000715"}}}


id: PBO:0064382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 4","termid":"PBO:0064382"}


id: PBO:0051477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (IV)/OR22-1 (pseudogene)","termid":"PBO:0051477"}


id: PBO:0056576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microspherule protein 1","termid":"PBO:0056576"}


id: GO:0098838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a folic acid, or one of its derivatives (dihydrofolate, tetrahydrofolate, methylene-tetrahydrofolate or methyl-tetrahydrofolate) is transported across a membrane.","definition_xrefs":["PMID:24745983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid transport","termid":"GO:0015884"},{"relation_name":"is_a","term_name":"vitamin transmembrane transport","termid":"GO:0035461"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"folate transmembrane transport","synonyms":[{"name":"folic acid transmembrane transport","type":"related"},{"name":"reduced folate transmembrane transport","type":"narrow"}],"termid":"GO:0098838"}


id: PBO:0013814
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously annotated as atg14","termid":"PBO:0013814"}


id: PBO:0027054
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_curved_microtubules","termid":"PBO:0027054"}


id: GO:0044591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of amylopectin stimulus.","definition_xrefs":["GOC:tt","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to amylopectin","termid":"GO:0044591"}


id: GO:0016207
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 4-coumarate + CoA = AMP + diphosphate + 4-coumaroyl-CoA.","definition_xrefs":["EC:6.2.1.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"4-coumarate-CoA ligase activity","secondary_identifiers":["KEGG_REACTION:R01616","MetaCyc:4-COUMARATE--COA-LIGASE-RXN","RHEA:19641"],"synonyms":[{"name":"4-coumarate-CoA synthetase activity","type":"exact"},{"name":"4-coumarate:CoA ligase (AMP-forming)","type":"related"},{"name":"4-coumarate:CoA ligase activity","type":"exact"},{"name":"4-coumarate:coenzyme A ligase activity","type":"related"},{"name":"4-coumaroyl-CoA synthase activity","type":"related"},{"name":"4-coumaroyl-CoA synthetase activity","type":"related"},{"name":"4-coumaryl-CoA synthetase activity","type":"related"},{"name":"4CL","type":"related"},{"name":"caffeolyl coenzyme A synthetase activity","type":"related"},{"name":"feruloyl CoA ligase activity","type":"related"},{"name":"feruloyl coenzyme A synthetase activity","type":"related"},{"name":"hydroxycinnamate:CoA ligase activity","type":"related"},{"name":"hydroxycinnamoyl CoA synthetase activity","type":"related"},{"name":"p-coumaroyl CoA ligase activity","type":"related"},{"name":"p-coumaryl coenzyme A synthetase activity","type":"related"},{"name":"p-coumaryl-CoA ligase activity","type":"related"},{"name":"p-coumaryl-CoA synthetase activity","type":"related"},{"name":"p-hydroxycinnamic acid:CoA ligase activity","type":"related"},{"name":"p-hydroxycinnamoyl coenzyme A synthetase activity","type":"related"},{"name":"sinapoyl coenzyme A synthetase activity","type":"related"}],"termid":"GO:0016207"}


id: GO:0009657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a plastid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plastid organization","synonyms":[{"name":"plastid organisation","type":"exact"},{"name":"plastid organization and biogenesis","type":"related"}],"termid":"GO:0009657"}


id: GO:0017148
data:
  {"annotated_genes":["SJAG_00690","SJAG_05000","SJAG_00423","SJAG_03501","SJAG_02638","SJAG_02026","SJAG_00169","SJAG_01942","SJAG_03869","SJAG_04291","SJAG_02592","SJAG_00786"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98941,95076,114348,117726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000766"},{"annotations":[111646,90792,109166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904689"},{"annotations":[91997,98835,93852,109167,115112,92293],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"},{"annotations":[98943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001125"},{"annotations":[98949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141014"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"},{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"negatively_regulates","term_name":"translation","termid":"GO:0006412"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00423":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_01942":null,"SJAG_02026":null,"SJAG_02592":null,"SJAG_02638":null,"SJAG_03501":null,"SJAG_03869":null,"SJAG_04291":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of translation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0016478"],"synonyms":[{"name":"down regulation of protein biosynthetic process","type":"exact"},{"name":"down-regulation of protein biosynthetic process","type":"exact"},{"name":"downregulation of protein biosynthetic process","type":"exact"},{"name":"inhibition of protein biosynthetic process","type":"narrow"},{"name":"negative regulation of protein anabolism","type":"exact"},{"name":"negative regulation of protein biosynthesis","type":"exact"},{"name":"negative regulation of protein biosynthetic process","type":"exact"},{"name":"negative regulation of protein formation","type":"exact"},{"name":"negative regulation of protein synthesis","type":"exact"},{"name":"protein biosynthesis inhibitor activity","type":"related"},{"name":"protein biosynthetic process inhibitor activity","type":"related"}],"termid":"GO:0017148","terms_by_termid":{"GO:0141014":null,"GO:1904689":null,"GO:1990625":null,"GO:2000766":null,"GO:2001125":null}}


id: FYPO:0006364
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which meiotic spindle microtubules become disconnected from the spindle pole body during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:24954111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle morphology during meiosis I","termid":"FYPO:0005652"},{"relation_name":"is_a","term_name":"abnormal spindle pole body morphology during meiosis I","termid":"FYPO:0006022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000121"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0001985","FYPO:0000631","FYPO:0002399","FYPO:0000121","FYPO:0000120","FYPO:0000002"],"is_obsolete":false,"name":"spindle microtubules detached from spindle pole body during meiosis I","synonyms":[{"name":"meiotic spindle microtubules detached from spindle pole body during meiosis I","type":"exact"},{"name":"non-polar spindle during meiosis I","type":"related"},{"name":"spindle microtubules detached from SPB during meiosis I","type":"exact"},{"name":"spindle microtubules detached from spindle pole body during first meiotic nuclear division","type":"exact"},{"name":"spindle pole body detached from spindle microtubules during meiosis I","type":"exact"}],"termid":"FYPO:0006364"}


id: PBO:0052720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 12","termid":"PBO:0052720"}


id: MONDO:0000324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete familial partial lipodystrophy (obsolete MONDO:0000324)","termid":"MONDO:0000324","xrefs":{"Monarch":{"xref_id":"0000324"}}}


id: PBO:0054479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1879","termid":"PBO:0054479"}


id: MONDO:0013224
data:
  {"annotated_genes":["SJAG_04755","SJAG_05313"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86812,86813],"is_not":false,"summary":null,"term":"MONDO:0013224"}]},"cv_name":"mondo","definition":"Any familial rhabdoid tumor in which the cause of the disease is a mutation in the SMARCA4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial rhabdoid tumor","termid":"MONDO:0016473"},{"relation_name":"is_a","term_name":"atypical teratoid rhabdoid tumor","termid":"MONDO:0020560"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"rhabdoid tumor predisposition syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18319","NCIT:C178394","OMIM:613325","UMLS:C2750074","MESH:C567643","MEDGEN:413749"],"synonyms":[{"name":"RTPS2","type":"related"},{"name":"SMARCA4 familial rhabdoid tumor","type":"exact"},{"name":"SMARCA4 familial rhabdoid tumour","type":"exact"},{"name":"familial rhabdoid tumor caused by mutation in SMARCA4","type":"exact"},{"name":"familial rhabdoid tumour caused by mutation in SMARCA4","type":"exact"},{"name":"rhabdoid tumor predisposition syndrome 2","type":"exact"},{"name":"rhabdoid tumor predisposition syndrome type 2","type":"exact"},{"name":"rhabdoid tumour predisposition syndrome type 2","type":"exact"}],"termid":"MONDO:0013224","terms_by_termid":{"MONDO:0013224":null},"xrefs":{"Monarch":{"xref_id":"0013224"}}}


id: PBO:0070680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 51","termid":"PBO:0070680"}


id: PBO:0005814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase delta subunit (predicted)","termid":"PBO:0005814"}


id: MONDO:0003615
data:
  {"annotated_genes":["SJAG_04300"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020730"}]},"cv_name":"mondo","definition":"Any nerve disorder caused by the entrapment and compression of a nerve.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy","termid":"MONDO:0005244"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"nerve compression syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C27221","SCTID:45781009","UMLS:C1510429","EFO:0009487","DOID:573","MESH:D009408","MEDGEN:266933"],"synonyms":[{"name":"compression neuropathy","type":"exact"},{"name":"entrapment neuropathy","type":"exact"},{"name":"peripheral nerve entrapment syndrome","type":"exact"}],"termid":"MONDO:0003615","terms_by_termid":{"MONDO:0020730":null},"xrefs":{"Monarch":{"xref_id":"0003615"}}}


id: PR:Q9UTH0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup132 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTH0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup132 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.04","synonyms":[{"name":"Spom972h-nup132","type":"exact"},{"name":"nuclear pore protein nup132 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTH0"}


id: RO:0009501
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"r 'realized in response to' s iff, r is a realizable (e.g. a plant trait such as responsivity to drought), s is an environmental stimulus (a process), and s directly causes the realization of r.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"RO:0002410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"realized_in_response_to","termid":"RO:0009501"}


id: PBO:0054139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1505","termid":"PBO:0054139"}


id: GO:0006713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glucocorticoids, hormonal C21 corticosteroids synthesized from cholesterol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid catabolic process","termid":"GO:0006706"},{"relation_name":"is_a","term_name":"glucocorticoid metabolic process","termid":"GO:0008211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"glucocorticoid catabolic process","synonyms":[{"name":"glucocorticoid breakdown","type":"exact"},{"name":"glucocorticoid catabolism","type":"exact"},{"name":"glucocorticoid degradation","type":"exact"}],"termid":"GO:0006713"}


id: PBO:0076799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEK receptor tyrosine kinase","termid":"PBO:0076799"}


id: PBO:0061906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"optineurin","termid":"PBO:0061906"}


id: PBO:0003218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V0 subunit e (predicted)","termid":"PBO:0003218"}


id: GO:0032508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating a region of unpaired single strands.","definition_xrefs":["GOC:isa_complete","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA duplex unwinding (obsolete GO:0032508)","synonyms":[{"name":"DNA unwinding","type":"exact"},{"name":"duplex DNA melting","type":"exact"}],"termid":"GO:0032508"}


id: GO:0014022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the neural plate is shaped by the intrinsic movement of the epidermal and neural plate regions.","definition_xrefs":["GOC:ef","ISBN:0878932585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelial sheet","termid":"GO:0002011"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"neural plate morphogenesis","termid":"GO:0001839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural plate elongation","termid":"GO:0014022"}


id: PBO:0028310
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_methylglyoxal","termid":"PBO:0028310"}


id: PBO:0087575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the 19S regulatory particle of the 26S proteasome lid; synthetically lethal with RPT1, which is an ATPase component of the 19S regulatory particle; physically interacts with Nob1p and Rpn3p; protein abundance increases in response to DNA replication stress","termid":"PBO:0087575"}


id: MONDO:0009613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive form of methylmalonic aciduria, caused by mutation(s) in the MMAA gene, encoding MMAA protein.","definition_xrefs":["NCIT:C142171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin B12-responsive methylmalonic acidemia","termid":"MONDO:0017214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"methylmalonic aciduria, cblA type","secondary_identifiers":["OMIM:251100","GARD:5500","SCTID:82245003","UMLS:C1855109","MEDGEN:344422","NANDO:1200795","Orphanet:79310","SCTID:73843004","DOID:0060742","NANDO:2201105"],"synonyms":[{"name":"MMA Cbl A type","type":"related"},{"name":"Methylmalonic aciduria, vitamin B12-responsive, cblA type","type":"exact"},{"name":"cblA - cobalamin locus a","type":"related"},{"name":"cblA methylmalonic acidemia","type":"related"},{"name":"cblB - cobalamin locus b","type":"related"},{"name":"cblB methylmalonic acidemia","type":"related"},{"name":"cobalamin A disease","type":"exact"},{"name":"cobalamin B disease","type":"exact"},{"name":"cobalamin locus A variant","type":"related"},{"name":"cobalamin locus B variant","type":"related"},{"name":"methylmalonic acidemia cblA type","type":"exact"},{"name":"methylmalonic acidemia, cblA type","type":"exact"},{"name":"methylmalonic aciduria cblA type","type":"exact"},{"name":"methylmalonic aciduria, cblA type","type":"exact"},{"name":"methylmalonic aciduria, vitamin B12-responsive due to a defect in synthesis of adenosylcobalamin cb1A type","type":"exact"},{"name":"methylmalonic aciduria, vitamin B12-responsive due to a defect in synthesis of adenosylcobalamin cblA type","type":"exact"},{"name":"methylmalonic aciduria, vitamin B12-responsive, due to defect in synthesis of adenosylcobalamin, cblA complementation type","type":"related"},{"name":"methylmalonic aciduria, vitamin B12-responsive, due to defect in synthesis of adenosylcobalamin, cblA type","type":"related"},{"name":"vitamin B12-responsive methylmalonic acidemia type cblA","type":"exact"},{"name":"vitamin B12-responsive methylmalonic aciduria type cblA","type":"exact"}],"termid":"MONDO:0009613","xrefs":{"Monarch":{"xref_id":"0009613"}}}


id: GO:0008195
data:
  {"annotated_genes":["SJAG_02763","SJAG_00920","SJAG_02356"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90948,107487,109889],"is_not":false,"summary":null,"term":"GO:0008195"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1,2-diacylglycerol 3-phosphate + H2O = a 1,2-diacyl-sn-glycerol + phosphate.","definition_xrefs":["RHEA:27429","PMID:25814022","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid phosphatase activity","termid":"GO:0042577"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00920":null,"SJAG_02356":null,"SJAG_02763":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"phosphatidate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1483203","Reactome:R-HSA-390329","Reactome:R-HSA-5221130","Reactome:R-HSA-2029468","EC:3.1.3.4","Reactome:R-HSA-75899","GO:0004606","Reactome:R-HSA-163688","Reactome:R-HSA-6797630","Reactome:R-HSA-164056","MetaCyc:PHOSPHATIDATE-PHOSPHATASE-RXN"],"synonyms":[{"name":"3-sn-phosphatidate phosphohydrolase activity","type":"related"},{"name":"acid phosphatidyl phosphatase activity","type":"related"},{"name":"phosphatic acid phosphatase activity","type":"related"},{"name":"phosphatic acid phosphohydrolase activity","type":"related"},{"name":"phosphatidate phosphohydrolase activity","type":"exact"},{"name":"phosphatidic acid phosphatase activity","type":"related"}],"termid":"GO:0008195","terms_by_termid":{"GO:0008195":null}}


id: MONDO:0016020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated encephalocele","termid":"MONDO:0016057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"frontal encephalocele","secondary_identifiers":["Orphanet:1931","ICD10CM:Q01.0","icd11.foundation:1375023725","UMLS:C0431289","MEDGEN:98460","SCTID:253103006","GARD:18753"],"synonyms":[{"name":"anterior encephalocele","type":"exact"}],"termid":"MONDO:0016020","xrefs":{"Monarch":{"xref_id":"0016020"}}}


id: PBO:0047492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fem-1 homolog A","termid":"PBO:0047492"}


id: GO:0031345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of cell projections.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection organization","termid":"GO:0031344"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"negatively_regulates","term_name":"cell projection organization","termid":"GO:0030030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell projection organization","synonyms":[{"name":"down regulation of cell projection organization","type":"exact"},{"name":"down-regulation of cell projection organization","type":"exact"},{"name":"downregulation of cell projection organization","type":"exact"},{"name":"inhibition of cell projection organization","type":"narrow"},{"name":"negative regulation of cell projection organisation","type":"exact"},{"name":"negative regulation of cell projection organization and biogenesis","type":"related"}],"termid":"GO:0031345"}


id: GO:0016304
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A heterodimeric phosphoinositide 3-kinase which can phosphorylate phosphatidylinositol, phosphatidylinositol-4-phosphate or phosphatidylinositol-4,5-bisphosphate. Also possesses intrinsic protein kinase activity.","definition_xrefs":["PMID:9759495"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphatidylinositol 3-kinase activity, class I (obsolete GO:0016304)","synonyms":[{"name":"phosphatidylinositol 3-kinase activity, class I","type":"exact"}],"termid":"GO:0016304"}


id: PBO:0046724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ecotropic viral integration site 2B","termid":"PBO:0046724"}


id: GO:0097056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of selenocysteinyl-tRNA(Sec). This process occurs through the following steps: a unique serine-tRNA with a UGA recognizing anticodon is first aminoacylated with serine; this is then phosphorylated by phosphoseryl-tRNA[Ser]Sec kinase; lastly, selenium is swapped for the phosphate on the serine.","definition_xrefs":["GOC:yaf","PMID:15317934"],"gene_count":0,"genotype_count":0,"name":"obsolete selenocysteinyl-tRNA(Sec) biosynthetic process (obsolete GO:0097056)","synonyms":[{"name":"selenocysteinyl-tRNA(Sec) anabolism","type":"exact"},{"name":"selenocysteinyl-tRNA(Sec) biosynthesis","type":"exact"},{"name":"selenocysteinyl-tRNA(Sec) formation","type":"exact"},{"name":"selenocysteinyl-tRNA(Sec) synthesis","type":"exact"}],"termid":"GO:0097056"}


id: GO:0080083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of glucosidic link in beta-gentiobiose.","definition_xrefs":["PMID:15604686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"beta-gentiobiose beta-glucosidase activity","termid":"GO:0080083"}


id: MONDO:1011874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degenerative neuromuscular disease, non-human animal","secondary_identifiers":["OMIA:001351"],"termid":"MONDO:1011874","xrefs":{"Monarch":{"xref_id":"1011874"}}}


id: MONDO:0100553
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any open angle glaucoma in which the cause of the disease is a mutation in the OPTN gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"open-angle glaucoma","termid":"MONDO:0005338"},{"relation_name":"is_a","term_name":"hereditary glaucoma","termid":"MONDO:0018174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"OPTN-related open angle glaucoma","secondary_identifiers":["OMIM:137760","MEDGEN:87389","UMLS:C0339573"],"synonyms":[{"name":"OPTN-related open angle glaucoma","type":"exact"},{"name":"glaucoma 1, open angle, E","type":"exact"}],"termid":"MONDO:0100553","xrefs":{"Monarch":{"xref_id":"0100553"}}}


id: PBO:0072619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radial spoke head 3","termid":"PBO:0072619"}


id: MONDO:0100136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE Any Fanconi anemia in which the cause of the disease is a mutation in the FANCM gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"gene_count":0,"genotype_count":0,"name":"obsolete Fanconia anemia complementation group M (obsolete MONDO:0100136)","synonyms":[{"name":"FANCM Fanconi anemia","type":"exact"},{"name":"Fanconi anemia caused by mutation in FANCM","type":"exact"}],"termid":"MONDO:0100136","xrefs":{"Monarch":{"xref_id":"0100136"}}}


id: GO:1902864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of embryonic camera-type eye development.","definition_xrefs":["GO_REF:0000058","GOC:mr","GOC:TermGenie","PMID:16872597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of embryonic camera-type eye development","termid":"GO:1902863"},{"relation_name":"negatively_regulates","term_name":"embryonic camera-type eye development","termid":"GO:0031076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of embryonic camera-type eye development","synonyms":[{"name":"down regulation of embryonic camera-type eye development","type":"exact"},{"name":"down regulation of embryonic eye development","type":"exact"},{"name":"down-regulation of embryonic camera-type eye development","type":"exact"},{"name":"down-regulation of embryonic eye development","type":"exact"},{"name":"downregulation of embryonic camera-type eye development","type":"exact"},{"name":"downregulation of embryonic eye development","type":"exact"},{"name":"inhibition of embryonic camera-type eye development","type":"narrow"},{"name":"inhibition of embryonic eye development","type":"narrow"},{"name":"negative regulation of embryonic eye development","type":"exact"}],"termid":"GO:1902864"}


id: PBO:0001807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid permease, unknown 3 (predicted)","termid":"PBO:0001807"}


id: GO:0070016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an armadillo repeat domain, an approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity protein armadillo. Arm-repeat proteins are involved in various processes, including intracellular signaling and cytoskeletal regulation.","definition_xrefs":["GOC:BHF","GOC:mah","InterPro:IPR000225","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"armadillo repeat domain binding","synonyms":[{"name":"Arm repeat domain binding","type":"exact"},{"name":"armadillo domain binding","type":"exact"},{"name":"armadillo repeat binding","type":"exact"}],"termid":"GO:0070016"}


id: GO:0005205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete chondroitin sulfate/dermatan sulfate proteoglycan (obsolete GO:0005205)","synonyms":[{"name":"chondroitin sulfate/dermatan sulfate proteoglycan","type":"exact"},{"name":"chondroitin sulphate/dermatan sulphate proteoglycan","type":"exact"}],"termid":"GO:0005205"}


id: MONDO:0859381
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, dilated, 100","secondary_identifiers":["MEDGEN:1840927","OMIM:620247","UMLS:C5830291"],"termid":"MONDO:0859381","xrefs":{"Monarch":{"xref_id":"0859381"}}}


id: MONDO:0024359
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central sleep apnea syndrome","termid":"MONDO:0004731"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central sleep apnea due to periodic breathing","secondary_identifiers":["MEDGEN:783212","SCTID:85721000119105","ICD9:786.09","UMLS:C3662057","ICD9:327.27"],"synonyms":[{"name":"central sleep apnea due to periodic breathing","type":"exact"}],"termid":"MONDO:0024359","xrefs":{"Monarch":{"xref_id":"0024359"}}}


id: PBO:0018209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal family transmembrane transporter (predicted)","termid":"PBO:0018209"}


id: GO:0009388
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete antisense RNA (obsolete GO:0009388)","synonyms":[{"name":"antisense RNA","type":"exact"}],"termid":"GO:0009388"}


id: PBO:0082906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cystathionine gamma-synthase, converts cysteine into cystathionine; STR2 has a paralog, YML082W, that arose from the whole genome duplication","termid":"PBO:0082906"}


id: MONDO:0035819
data:
  {"annotated_genes":["SJAG_03892"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86057],"is_not":false,"summary":null,"term":"MONDO:0035819"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03892":null},"genotype_count":0,"is_obsolete":false,"name":"cerebellar hypoplasia-intellectual disability-congenital microcephaly-dystonia-anemia-growth retardation syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:603448","MEDGEN:1780242","OMIM:619273","UMLS:C5543287","GARD:18020"],"synonyms":[{"name":"CIMDAG syndrome","type":"exact"}],"termid":"MONDO:0035819","terms_by_termid":{"MONDO:0035819":null},"xrefs":{"Monarch":{"xref_id":"0035819"}}}


id: GO:0140994
data:
  {"annotated_genes":["SJAG_02203","SJAG_02389","SJAG_03061","SJAG_03126","SJAG_00150","SJAG_02592","SJAG_01654","SJAG_00342","SJAG_03967","SJAG_01286","SJAG_03624"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93866,95295,105539,97329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008353"},{"annotations":[91090,93129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008420"},{"annotations":[93827,108529,95296,105540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140834"},{"annotations":[93828,108530,105541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140836"},{"annotations":[95325,96684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180007"},{"annotations":[111459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180005"}]},"cv_name":"molecular_function","definition":"A catalytic activity that acts on the RNA polymerase II large subunit CTD heptapeptide repeat (consensus YSPTSPS). Reversible modifications cof the RNA polymerase II CTD repeats contribute to regulation of RNA polymerase activity.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00342":null,"SJAG_01286":null,"SJAG_01654":null,"SJAG_02203":null,"SJAG_02389":null,"SJAG_02592":null,"SJAG_03061":null,"SJAG_03126":null,"SJAG_03624":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat modifying activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA polymerase II CTD repeat modifying activity","type":"exact"},{"name":"RNA polymerase II large subunit CTD heptapeptide repeat modifying activity","type":"exact"}],"termid":"GO:0140994","terms_by_termid":{"GO:0008353":null,"GO:0008420":null,"GO:0140834":null,"GO:0140836":null,"GO:0180005":null,"GO:0180007":null}}


id: GO:0061758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2-hydroxyglutarate + acceptor -> 2-oxoglutarate + reduced acceptor.","definition_xrefs":["GOC:dph","RHEA:21253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-hydroxyglutarate dehydrogenase activity","termid":"GO:0047545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2-hydroxyglutarate dehydrogenase activity, forward reaction","synonyms":[{"name":"alpha-ketoglutarate reductase activity, reverse reaction","type":"exact"}],"termid":"GO:0061758"}


id: PBO:0049790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 25","termid":"PBO:0049790"}


id: PBO:0000184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine cleavage complex subunit P (predicted)","termid":"PBO:0000184"}


id: MONDO:0010163
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tyrosinosis","secondary_identifiers":["OMIM:276800","MESH:C562659","SCTID:57414003","UMLS:C0268484","MEDGEN:78683","ICD9:270.2"],"synonyms":[{"name":"Tyrosinosis","type":"exact"}],"termid":"MONDO:0010163","xrefs":{"Monarch":{"xref_id":"0010163"}}}


id: PBO:0064399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polynucleotide kinase 3'-phosphatase","termid":"PBO:0064399"}


id: GO:0048174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that decreases short-term neuronal synaptic plasticity, the ability of neuronal synapses to change in the short-term as circumstances require. Short-term neuronal synaptic plasticity generally involves increasing or decreasing synaptic sensitivity.","definition_xrefs":["GOC:jid","PMID:11891290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of short-term neuronal synaptic plasticity","termid":"GO:0048172"},{"relation_name":"is_a","term_name":"negative regulation of neurogenesis","termid":"GO:0050768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of short-term neuronal synaptic plasticity","synonyms":[{"name":"down regulation of short-term neuronal synaptic plasticity","type":"exact"},{"name":"down-regulation of short-term neuronal synaptic plasticity","type":"exact"},{"name":"downregulation of short-term neuronal synaptic plasticity","type":"exact"},{"name":"inhibition of short-term neuronal synaptic plasticity","type":"narrow"}],"termid":"GO:0048174"}


id: SO:0002022
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A small RNA molecule, 22-23 nt in size, that is the product of a longer RNA. The production of priRNAs is independent of dicer and involves binding of RNA by argonaute and trimming by triman. In fission yeast, priRNAs trigger the establishment of heterochromatin. PriRNAs are primarily generated from centromeric transcripts (dg and dh repeats), but may also be produced from degradation products of primary transcripts.","definition_xrefs":["PMID:20178743","PMID:24095277","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"priRNA","synonyms":[{"name":"primal small RNA","type":"exact"}],"termid":"SO:0002022"}


id: PBO:0002460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S28 (predicted)","termid":"PBO:0002460"}


id: GO:1903058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of melanosome organization.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:rl","GOC:TermGenie","PMID:24769727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of melanosome organization","termid":"GO:1903056"},{"relation_name":"positively_regulates","term_name":"melanosome organization","termid":"GO:0032438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of melanosome organization","synonyms":[{"name":"activation of melanosome organisation","type":"narrow"},{"name":"activation of melanosome organization","type":"narrow"},{"name":"activation of melanosome organization and biogenesis","type":"related"},{"name":"positive regulation of melanosome organisation","type":"exact"},{"name":"positive regulation of melanosome organization and biogenesis","type":"related"},{"name":"up regulation of melanosome organisation","type":"exact"},{"name":"up regulation of melanosome organization","type":"exact"},{"name":"up regulation of melanosome organization and biogenesis","type":"related"},{"name":"up-regulation of melanosome organisation","type":"exact"},{"name":"up-regulation of melanosome organization","type":"exact"},{"name":"up-regulation of melanosome organization and biogenesis","type":"related"},{"name":"upregulation of melanosome organisation","type":"exact"},{"name":"upregulation of melanosome organization","type":"exact"},{"name":"upregulation of melanosome organization and biogenesis","type":"related"}],"termid":"GO:1903058"}


id: MONDO:0006019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An endemic, infectious, nonvenereal disease in humans that presents mainly in children younger than 15 years. The disease occurs primarily in warm, humid, tropical areas of Africa, Asia, South America, and Oceania, among poor rural populations where conditions of overcrowding and poor sanitation prevail. Infection with Treponema pertenue, a subspecies of Treponema pallidum, causes the disease.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syphilis","termid":"MONDO:0005976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yaws","secondary_identifiers":["NCIT:C41353","ICD9:102.9","GARD:7913","icd11.foundation:840525023","ICD9:102","ICD9:102.7","MESH:D015001","SCTID:70647001","ICD10CM:A66","UMLS:C0043388","MEDGEN:12186","DOID:10371","NORD:1872"],"synonyms":[{"name":"Bouba","type":"exact"},{"name":"Treponema pallidum subsp. pertenue caused disease or disorder","type":"exact"},{"name":"Treponema pallidum subsp. pertenue disease or disorder","type":"exact"},{"name":"Treponema pallidum subsp. pertenue infectious disease","type":"exact"},{"name":"Treponema pertenue infection","type":"related"},{"name":"endemic treponematoses","type":"related"},{"name":"frambesia","type":"exact"},{"name":"frambesia tropica","type":"exact"},{"name":"frambosie","type":"exact"},{"name":"polypapilloma tropicum","type":"exact"},{"name":"thymosis","type":"exact"}],"termid":"MONDO:0006019","xrefs":{"Monarch":{"xref_id":"0006019"}}}


id: PBO:0026931
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_vegetative_cell_with_oscillating_nucleus","termid":"PBO:0026931"}


id: GO:0097217
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A pit-like area in the cell wall of a sieve element; contains pores lined with callose and occupied by strands of protoplasmic material that interconnect the protoplasts of contiguous sieve elements.","definition_xrefs":["ISBN:0471738433","POC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plant-type cell wall","termid":"GO:0009505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"sieve area","termid":"GO:0097217"}


id: PBO:0061968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AG member 2","termid":"PBO:0061968"}


id: GO:0018137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl cysteine-peptidyl glycine cross-link by the condensation of a cysteine thiol with the carbonyl of the preceding residue and alpha-beta dehydrogenation.","definition_xrefs":["RESID:AA0241"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via glycine thiazolecarboxylic acid (obsolete GO:0018137)","termid":"GO:0018137"}


id: GO:0008036
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a diuretic hormone and transmitting the signal to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"diuretic hormone receptor activity","termid":"GO:0008036"}


id: FYPO:0004878
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more mitotically up-regulated RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells).","definition_xrefs":["PomBase:mah","PMID:18203864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased level of mitotically up-regulated gene mRNA during vegetative growth","synonyms":[{"name":"decreased level of mitotically up-regulated gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of mitotically up-regulated gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of mitotically up-regulated gene transcripts during vegetative growth","type":"exact"},{"name":"decreased level of mitotically upregulated gene mRNA during vegetative growth","type":"exact"},{"name":"decreased mitotically up-regulated gene mRNA accumulation during vegetative growth","type":"related"},{"name":"reduced level of mitotically up-regulated gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0004878"}


