# terms

id: PR:G2TRS2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new20 gene.","definition_xrefs":["UniProtKB:G2TRS2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein new20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.19","synonyms":[{"name":"Spom972h-new20","type":"exact"}],"termid":"PR:G2TRS2"}


id: MONDO:0700187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition occurring in cats characterized by solitary or multiple cutaneous nodules and papules, which may metastasize late in the course of the disease. Lesions consist of poorly circumscribed histiocytic infiltrates of the superficial and deep dermis, with variable extension into the subcutis.","definition_xrefs":["NCIT:C176702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feline neoplasm","termid":"MONDO:0700175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feline progressive histiocytosis","termid":"MONDO:0700187","xrefs":{"Monarch":{"xref_id":"0700187"}}}


id: PBO:0071181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 22","termid":"PBO:0071181"}


id: GO:0051211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell irreversibly increases in size in one or more axes, where the growth rate varies according to the direction of growth. Growth may be limited to a particular axis, axes, or to particular locations on the surface of the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell growth","termid":"GO:0016049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anisotropic cell growth","synonyms":[{"name":"non-isotropic cell growth","type":"exact"}],"termid":"GO:0051211"}


id: MONDO:0018988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Iridocorneal endothelial (ICE) syndrome describes a group of progressive corneal proliferative endotheliopathies comprised of Chandler syndrome, Cogan-Reese syndrome and essential iris atrophy, affecting mainly young adult females and characterized by iris holes and atrophy, papillary distortion, anterior synechiae, corneal edema and often with secondary glaucoma and corneal decompensation as complications","definition_xrefs":["Orphanet:64734"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"excluded_subClassOf","term_name":"obsolete rare acquired eye disease (obsolete MONDO:0015120)","termid":"MONDO:0015120"},{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glaucoma due to a proliferation and differentiation anomaly (obsolete MONDO:0020221)","termid":"MONDO:0020221"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iridocorneal endothelial syndrome","secondary_identifiers":["SCTID:129623003","MESH:D057129","MEDGEN:242751","MedDRA:10053678","GARD:60","UMLS:C1096100","NCIT:C84792","icd11.foundation:265074385"],"synonyms":[{"name":"ICE syndrome","type":"exact"}],"termid":"MONDO:0018988","xrefs":{"Monarch":{"xref_id":"0018988"}}}


id: PBO:0057919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3622a","termid":"PBO:0057919"}


id: PBO:0027388
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_cellular_response_to_salt_stress","termid":"PBO:0027388"}


id: GO:0043886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a carboxysome shell, an organelle found in all cyanobacteria and some chemoautotrophs, consisting of a proteinaceous coat and enzymes for the fixation of CO2.","definition_xrefs":["GOC:jl","PMID:28934381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of carboxysome shell","synonyms":[{"name":"structural constituent of carboxysome","type":"related"}],"termid":"GO:0043886"}


id: GO:0006240
data:
  {"annotated_genes":["SJAG_02874","SJAG_00885","SJAG_04665"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91921,94973,106749],"is_not":false,"summary":null,"term":"GO:0006240"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dCDP, deoxycytidine 5'-diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside diphosphate biosynthetic process","termid":"GO:0009197"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide biosynthetic process","termid":"GO:0009221"},{"relation_name":"is_a","term_name":"dCDP metabolic process","termid":"GO:0046062"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dCDP biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dCDP anabolism","type":"exact"},{"name":"dCDP biosynthesis","type":"exact"},{"name":"dCDP formation","type":"exact"},{"name":"dCDP synthesis","type":"exact"}],"termid":"GO:0006240","terms_by_termid":{"GO:0006240":null}}


id: PBO:0028689
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_horsetail_nucleus_morphology","termid":"PBO:0028689"}


id: MONDO:0009513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"LOC syndrome is a subtype of junctional epidermolysis bullosa (JEB) characterized by an altered cry in the neonatal period and by aberrant production of granulation tissue in particular affecting the upper airway tract, conjunctiva and periungual/subungual sites.","definition_xrefs":["Orphanet:2407"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic respiratory or mediastinal malformation (obsolete MONDO:0015221)","termid":"MONDO:0015221"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"junctional epidermolysis bullosa","termid":"MONDO:0017612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"laryngo-onycho-cutaneous syndrome","secondary_identifiers":["UMLS:C1328355","MESH:C537032","GARD:368","SCTID:722675000","MEDGEN:272227","OMIM:245660"],"synonyms":[{"name":"LARYNGOONYCHOCUTANEOUS syndrome","type":"related"},{"name":"LOC syndrome","type":"exact"},{"name":"LOCS","type":"related"},{"name":"Shabbir syndrome","type":"exact"},{"name":"laryngeal and ocular granulation tissue in children from the Indian subcontinent syndrome","type":"exact"},{"name":"laryngo-onycho-cutaneous syndrome","type":"exact"},{"name":"logic syndrome","type":"exact"}],"termid":"MONDO:0009513","xrefs":{"Monarch":{"xref_id":"0009513"}}}


id: PBO:0050144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3","termid":"PBO:0050144"}


id: PBO:0110394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEFH pseudogene 2","termid":"PBO:0110394"}


id: GO:2001019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of retrograde axon cargo transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"regulation of retrograde axon cargo transport","termid":"GO:2001017"},{"relation_name":"positively_regulates","term_name":"retrograde axonal transport","termid":"GO:0008090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of retrograde axon cargo transport","synonyms":[{"name":"positive regulation of retrograde axonal transport","type":"exact"}],"termid":"GO:2001019"}


id: PBO:0012268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carboxylate transporter (predicted)","termid":"PBO:0012268"}


id: MONDO:0008084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropathy, congenital, with arthrogryposis multiplex","secondary_identifiers":["MESH:C535714","UMLS:C1834206","MEDGEN:320286","OMIM:162370"],"synonyms":[{"name":"congenital non-progressive peripheral neuropathy with arthrogryposis multiplex","type":"related"},{"name":"neuropathy, congenital, with arthrogryposis multiplex","type":"exact"}],"termid":"MONDO:0008084","xrefs":{"Monarch":{"xref_id":"0008084"}}}


id: FYPO:0007089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested normally at the mitotic G2/M phase transition when the cell is subject to sulfur starvation.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normally arrested mitotic cell cycle progression","termid":"FYPO:0001025"},{"relation_name":"is_a","term_name":"cell cycle arrest at mitotic G2/M phase transition during starvation","termid":"FYPO:0001151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0000257","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"normal cell cycle arrest at mitotic G2/M phase transition during sulfur starvation","synonyms":[{"name":"normal cell cycle arrest at mitotic G2/M phase transition during sulfur depletion","type":"exact"},{"name":"normal cell cycle arrest at mitotic G2/M phase transition during sulfur deprivation","type":"exact"},{"name":"normal cell cycle arrest at mitotic G2/M phase transition during sulfur limitation","type":"exact"},{"name":"normal cell cycle arrest in mitotic G2 phase during sulfur starvation","type":"related"},{"name":"normal mitotic cell cycle arrest at mitotic G2/M phase transition during sulfur starvation","type":"exact"}],"termid":"FYPO:0007089"}


id: PBO:0066591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member F, filopodia associated","termid":"PBO:0066591"}


id: GO:0000401
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a DNA segment containing the open form of a four-way junction, also known as a Holliday junction, a structure where two DNA double strands are held together by reciprocal exchange of two of the four strands, one strand each from the two original helices. The open form of a four-way junction can be diagrammed without any of the strands crossing over.","definition_xrefs":["GOC:krc","ISBN:0815332181","PMID:15563464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"four-way junction DNA binding","termid":"GO:0000400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"open form four-way junction DNA binding","synonyms":[{"name":"open form Holliday junction binding","type":"exact"}],"termid":"GO:0000401"}


id: GO:0061765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont alters or subverts a non-canonical NF-kappaB signaling cascade in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:26764146","GOC:bc","GOC:BHF_miRNA","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete perturbation by virus of host non-canonical NF-kappaB signal transduction (obsolete GO:0061765)","synonyms":[{"name":"modulation by virus of host NIK/NF-kappaB cascade","type":"exact"},{"name":"modulation by virus of host NIK/NF-kappaB signaling","type":"exact"},{"name":"perturbation by virus of host NIK/NF-kappaB cascade","type":"exact"}],"termid":"GO:0061765"}


id: GO:0180022
data:
  {"annotated_genes":["SJAG_03189","SJAG_02096","SJAG_00898"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91353,102629,115585],"is_not":false,"summary":null,"term":"GO:0180022"}]},"cv_name":"cellular_component","definition":"A ribosome disassembly complex which dissociates stalled ribsome subunits as part of the ribosome quality control pathway. RQT complex is composed of a RNA helicase-family protein yeast Rqt2 (human ASCC3), a ubiquitin-binding protein yeast Rqt3, (human ASCC2), and Rqt4 (human TRIP4). The human complex has an additional component protein ASCC1 and can act as a transcriptional coactivator by interacting with transcription factors such as NF-kappa B.","definition_xrefs":["PMID:12077347","PMID:28757607","PMID:32099016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00898":null,"SJAG_02096":null,"SJAG_03189":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"RQC-trigger complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ASC-1 complex","type":"exact"},{"name":"RQT complex","type":"exact"},{"name":"activating signal cointegrator 1 complex","type":"exact"}],"termid":"GO:0180022","terms_by_termid":{"GO:0180022":null}}


id: FYPO:0007275
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitochondrion inheritance is abnormal during the meiotic cell cycle. Mitochondrion inheritance is a cellular process that results in the distribution of mitochondria into daughter cells after mitosis or meiosis, mediated by interactions between mitochondria and the cytoskeleton.","definition_xrefs":["GO:0000001","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during meiotic cell cycle","termid":"FYPO:0007260"},{"relation_name":"is_a","term_name":"abnormal mitochondrion inheritance","termid":"FYPO:0007274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abnormal mitochondrion inheritance during meiotic cell cycle","synonyms":[{"name":"abnormal mitochondrial inheritance during meiotic cell cycle","type":"exact"},{"name":"abnormal mitochondrion inheritance during meiosis","type":"related"}],"termid":"FYPO:0007275"}


id: PBO:0055716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMF1 antisense RNA 1","termid":"PBO:0055716"}


id: PBO:0088981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L43","termid":"PBO:0088981"}


id: MONDO:1012944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amelogenesis imperfecta that occurs in rabbits due to a mutation in the FAM83H gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta, non-human animal","termid":"MONDO:1012952"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta, FAM83H-related, rabbit","secondary_identifiers":["OMIA:002600-9986"],"termid":"MONDO:1012944","xrefs":{"Monarch":{"xref_id":"1012944"}}}


id: PBO:0044410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily G member 1, pseudogene","termid":"PBO:0044410"}


id: PBO:0076278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptonemal complex protein 2","termid":"PBO:0076278"}


id: PBO:0047654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase family member 6 (inactive)","termid":"PBO:0047654"}


id: GO:0032214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the semi-conservative replication of telomeric DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"negative regulation of telomere maintenance","termid":"GO:0032205"},{"relation_name":"is_a","term_name":"regulation of telomere maintenance via semi-conservative replication","termid":"GO:0032213"},{"relation_name":"negatively_regulates","term_name":"telomere maintenance via semi-conservative replication","termid":"GO:0032201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0032200"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0007049","GO:0032200","GO:0008150"],"is_obsolete":false,"name":"negative regulation of telomere maintenance via semi-conservative replication","synonyms":[{"name":"down regulation of telomere maintenance via semi-conservative replication","type":"exact"},{"name":"down-regulation of telomere maintenance via semi-conservative replication","type":"exact"},{"name":"downregulation of telomere maintenance via semi-conservative replication","type":"exact"},{"name":"inhibition of telomere maintenance via semi-conservative replication","type":"narrow"}],"termid":"GO:0032214"}


id: PBO:0075078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 128","termid":"PBO:0075078"}


id: GO:0030680
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonuclease P complex that contains a single RNA molecule that is necessary and usually sufficient for catalysis, and a single protein molecule. Examples of this complex are found in Bacterial species.","definition_xrefs":["PMID:12045094","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonuclease P complex","termid":"GO:0030677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"dimeric ribonuclease P complex","synonyms":[{"name":"dimeric RNase P complex","type":"exact"}],"termid":"GO:0030680"}


id: MONDO:0041095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An malignant otitis externa caused by infection with Pseudomonas aeruginosa.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant otitis externa","termid":"MONDO:0001050"},{"relation_name":"is_a","term_name":"Pseudomonas aeruginosa infectious disease","termid":"MONDO:0040732"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant otitis externa caused by Pseudomonas aeruginosa","secondary_identifiers":["UMLS:C0395818","MEDGEN:583067","SCTID:232230009"],"synonyms":[{"name":"Pseudomonas aeruginosa caused malignant otitis externa","type":"exact"},{"name":"Pseudomonas aeruginosa malignant otitis externa","type":"exact"},{"name":"malignant otitis externa caused by Pseudomonas aeruginosa","type":"exact"},{"name":"malignant otitis externa due to Pseudomonas aeruginosa","type":"exact"}],"termid":"MONDO:0041095","xrefs":{"Monarch":{"xref_id":"0041095"}}}


id: MONDO:0004273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, benign and well circumscribed neoplasm that arises from the breast. It is characterized by the proliferation of epithelial cells with extensive apocrine metaplasia.","definition_xrefs":["NCIT:C40383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast adenoma","termid":"MONDO:0002058"},{"relation_name":"is_a","term_name":"apocrine adenoma","termid":"MONDO:0002804"},{"relation_name":"is_a","term_name":"sweat gland adenoma","termid":"MONDO:0021110"},{"relation_name":"is_a","term_name":"benign neoplasm of sweat gland","termid":"MONDO:0021489"},{"relation_name":"is_a","term_name":"benign epithelial skin neoplasm","termid":"MONDO:0024666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"breast apocrine adenoma","secondary_identifiers":["icd11.foundation:636674012","DOID:7540","MEDGEN:235590","UMLS:C1388299"],"synonyms":[{"name":"apocrine adenoma of breast","type":"exact"},{"name":"breast apocrine adenoma","type":"exact"}],"termid":"MONDO:0004273","xrefs":{"Monarch":{"xref_id":"0004273"}}}


id: PBO:0087042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L1B; N-terminally acetylated; homologous to mammalian ribosomal protein L10A and bacterial L1; RPL1B has a paralog, RPL1A, that arose from the whole genome duplication; rpl1a rpl1b double null mutation is lethal; ribosomes containing Rpl1b are more efficient in translation of respiration-related proteins","termid":"PBO:0087042"}


id: PBO:0072856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"store-operated calcium entry associated regulatory factor","termid":"PBO:0072856"}


id: MONDO:0014614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital stationary night blindness characterized by autosomal recessive inheritance that has material basis in homozygous mutation in the GNAT1 gene on chromosome 3p21.","definition_xrefs":["DOID:0110714","PMID:22190596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"congenital stationary night blindness","termid":"MONDO:0016293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005328","MONDO:0006025"],"is_obsolete":false,"name":"congenital stationary night blindness 1G","secondary_identifiers":["OMIM:616389","UMLS:C4225345","MEDGEN:906532","GARD:16099"],"synonyms":[{"name":"CSNB1G","type":"exact"},{"name":"congenital stationary night blindness type 1G","type":"exact"},{"name":"night blindness, congenital stationary, type 1G","type":"related"}],"termid":"MONDO:0014614","xrefs":{"Monarch":{"xref_id":"0014614"}}}


id: GO:0015835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of peptidoglycans, a class of glycoconjugates found in bacterial cell walls, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"peptidoglycan transport","synonyms":[{"name":"murein transport","type":"exact"}],"termid":"GO:0015835"}


id: MONDO:0001736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mastitis","termid":"MONDO:0006849"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal infective mastitis","secondary_identifiers":["DOID:13520","ICD10CM:P39.0","MEDGEN:510679","ICD9:771.5","SCTID:3468005","UMLS:C0158948"],"termid":"MONDO:0001736","xrefs":{"Monarch":{"xref_id":"0001736"}}}


id: PBO:0073399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 2","termid":"PBO:0073399"}


id: MONDO:0019127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare idiopathic inflammatory myopathy characterized by symmetric proximal muscle weakness and elevated muscle enzymes.","definition_xrefs":["Orphanet:732"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"acquired idiopathic inflammatory myopathy","termid":"MONDO:0020122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"polymyositis","secondary_identifiers":["UMLS:C0085655","MEDGEN:39086","EFO:0003063","MESH:D017285","NCIT:C26925","ICD10CM:M33.2","DOID:0080745","icd11.foundation:1157134196","ICD9:710.4","GARD:7425","MedDRA:10036102","NANDO:1200276","SCTID:31384009","Wikipedia:Polymyositis"],"synonyms":[{"name":"PM","type":"exact"},{"name":"polymyositis","type":"exact"}],"termid":"MONDO:0019127","xrefs":{"Monarch":{"xref_id":"0019127"}}}


id: MONDO:0001600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign cyst located in the salivary gland that is lined by epithelium and filled with mucoid fluid, tissue, or other material; it is usually caused by duct obstruction.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland disorder","termid":"MONDO:0001142"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucocele of salivary gland","secondary_identifiers":["ICD10CM:K11.6","icd11.foundation:48444833","SCTID:69825009","ICD9:527.6","DOID:12904","MEDGEN:10117","MESH:D011900","UMLS:C0026686"],"synonyms":[{"name":"mucous retention cyst of salivary gland","type":"exact"},{"name":"ranula","type":"exact"},{"name":"salivary cyst","type":"exact"},{"name":"salivary gland mucocele","type":"exact"}],"termid":"MONDO:0001600","xrefs":{"Monarch":{"xref_id":"0001600"}}}


id: PBO:0081249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 20","termid":"PBO:0081249"}


id: MONDO:0043771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cutaneous inflammatory reaction occurring as a result of exposure to biologically effective levels of ionizing radiation.","definition_xrefs":["NCIT:C3349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"radiation-induced disorder","termid":"MONDO:0043459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"radiodermatitis","secondary_identifiers":["MESH:D011855","SCTID:49084001"],"synonyms":[{"name":"Dermatitides, radiation recall","type":"related"},{"name":"Dermatitides, radiation-induced","type":"related"},{"name":"Radiodermatitides","type":"related"},{"name":"dermatitis radiation","type":"exact"},{"name":"dermatitis, radiation induced","type":"related"},{"name":"dermatitis, radiation recall","type":"related"},{"name":"dermatitis, radiation-induced","type":"related"},{"name":"radiation dermatitis","type":"exact"},{"name":"radiation induced dermatitis","type":"related"},{"name":"radiation recall Dermatitides","type":"related"},{"name":"radiation recall dermatitis","type":"related"},{"name":"radiation recall reaction","type":"related"},{"name":"radiation recall reactions","type":"related"},{"name":"radiation-induced Dermatitides","type":"related"},{"name":"radiation-induced dermatitis","type":"exact"},{"name":"radiodermatitis","type":"exact"},{"name":"reaction, radiation recall","type":"related"},{"name":"reactions, radiation recall","type":"related"},{"name":"recall reaction, radiation","type":"related"},{"name":"recall reactions, radiation","type":"related"}],"termid":"MONDO:0043771","xrefs":{"Monarch":{"xref_id":"0043771"}}}


id: FYPO:0004872
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a 2-oxoglutarate-dependent dioxygenase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished dioxygenase activity","termid":"FYPO:0004365"},{"relation_name":"is_a","term_name":"abnormal 2-oxoglutarate dioxygenase activity","termid":"FYPO:0004871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abolished 2-oxoglutarate dioxygenase activity","synonyms":[{"name":"2-oxoglutarate dioxygenase activity abolished","type":"exact"},{"name":"abolished 2-oxoglutarate-dependent dioxygenase activity","type":"exact"},{"name":"abolished oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors","type":"exact"}],"termid":"FYPO:0004872"}


id: GO:0030364
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A factor required in mRNA 3' end processing for both the cleavage and poly(A) addition reactions and, consistent with this function, recognizes AAUAAA, a signal also essential for both reactions.","definition_xrefs":["PMID:10357856"],"gene_count":0,"genotype_count":0,"name":"obsolete cleavage and polyadenylylation specificity factor activity (obsolete GO:0030364)","synonyms":[{"name":"CPSF","type":"exact"},{"name":"cleavage and polyadenylation specificity factor activity","type":"exact"},{"name":"cleavage and polyadenylylation specificity factor activity","type":"exact"},{"name":"cleavage/polyadenylation specificity factor activity","type":"exact"}],"termid":"GO:0030364"}


id: PATO:0001993
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellularity quality inhering in a bearer by virtue of the bearer's consisting of more than one cell.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellularity","termid":"PATO:0001992"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multicellular","termid":"PATO:0001993"}


id: MONDO:0017150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Pulmonary arterial hypertension associated with another disease is a group of conditions that lead to PAH; connective tissue diseases (lupus erythematosus, systemic sclerosis and mixed connective tissues disease), congenital heart disease (Eisenmenger syndrome), HIV infection, portal hypertension, schistosomiasis and chronic hemolytic anemia, which is characterized by elevated pulmonary arterial resistance leading to right heart failure that is progressive and potentially fatal.","definition_xrefs":["Orphanet:275791"],"gene_count":0,"genotype_count":0,"name":"obsolete pulmonary arterial hypertension associated with another disease (obsolete MONDO:0017150)","secondary_identifiers":["NANDO:2201048"],"synonyms":[{"name":"PAH associated with another disease","type":"exact"},{"name":"secondary PAH","type":"exact"}],"termid":"MONDO:0017150","xrefs":{"Monarch":{"xref_id":"0017150"}}}


id: GO:0052180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of protease activity, the catalysis of the hydrolysis of peptide bonds in a protein, in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of peptidase activity in other organism involved in symbiotic interaction (obsolete GO:0052180)","synonyms":[{"name":"down regulation of protease activity in other organism during symbiotic interaction","type":"exact"},{"name":"down-regulation of protease activity in other organism during symbiotic interaction","type":"exact"},{"name":"downregulation of protease activity in other organism during symbiotic interaction","type":"exact"},{"name":"inhibition of protease activity in other organism during symbiotic interaction","type":"narrow"},{"name":"negative regulation of protease activity in other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052180"}


id: PBO:0065378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy specific beta-1-glycoprotein 6","termid":"PBO:0065378"}


id: PBO:0034572
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_telomerase_RNA_reverse_transcriptase_activity","termid":"PBO:0034572"}


id: GO:0030673
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding an axon; it is a specialized trilaminar random mosaic of protein molecules floating within a fluid matrix of highly mobile phospholipid molecules, 7-8 nm in thickness.","definition_xrefs":["PMID:9527135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection membrane","termid":"GO:0032589"},{"relation_name":"part_of","term_name":"main axon","termid":"GO:0044304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"axolemma","secondary_identifiers":["NIF_Subcellular:sao250772229","Wikipedia:Axolemma"],"synonyms":[{"name":"axonal membrane","type":"exact"}],"termid":"GO:0030673"}


id: PBO:0085994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; required for viability in rich media of cells lacking mitochondrial DNA; mutants have an invasive growth defect with elongated morphology; induced by amino acid starvation; ICY1 has a paralog, ATG41, that arose from the whole genome duplication","termid":"PBO:0085994"}


id: PBO:0072085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 15","termid":"PBO:0072085"}


id: PBO:0089371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial copper chaperone for cytochrome c oxidase Cox19","termid":"PBO:0089371"}


id: GO:0002805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antimicrobial peptide biosynthesis.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide production","termid":"GO:0002784"},{"relation_name":"regulates","term_name":"antimicrobial peptide biosynthetic process","termid":"GO:0002777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of antimicrobial peptide biosynthetic process","termid":"GO:0002805"}


id: PBO:0087928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transferrin receptor-like protein; plasma membrane protein that binds Bsd2p and regulates ubiquitination and vacuolar degradation of the metal transporter Smf1p; functionally redundant with Tre2p; TRE1 has a paralog, TRE2, that arose from the whole genome duplication","termid":"PBO:0087928"}


id: PBO:0035997
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_methylation_at_centromere_central_core_during_vegetative_growth","termid":"PBO:0035997"}


id: PBO:0027061
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_endo-1,6-beta-glucosidase_activity","termid":"PBO:0027061"}


id: PBO:0048749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine-N-acyltransferase like 1 pseudogene 2","termid":"PBO:0048749"}


id: MONDO:0005900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the parotid glands.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parotid disorder","termid":"MONDO:0005899"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parotitis","secondary_identifiers":["SCTID:14756005","NCIT:C114281","MEDGEN:45335","DOID:10301","EFO:0007423","UMLS:C0030583","MESH:D010309"],"synonyms":[{"name":"inflammation of parotid gland","type":"exact"},{"name":"parotid gland inflammation","type":"exact"}],"termid":"MONDO:0005900","xrefs":{"Monarch":{"xref_id":"0005900"}}}


id: PATO:0001525
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sound frequency in the range of 20 to 20.000 Hz.","direct_ancestors":[{"relation_name":"is_a","term_name":"sound frequency","termid":"PATO:0001520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sonic","termid":"PATO:0001525"}


id: GO:1990957
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is located at the ciliary transition zone and consists of the NPHP4 and NPHP1 proteins. It acts as an organiser of the transition zone inner structure, specifically the Y-shaped links, in conjunction with the MKS complex. It is involved in ciliary protein trafficking and is required for correct functioning of the WNT and Hippo signaling pathways.","definition_xrefs":["PMID:25150219","GOC:cilia","PMID:21498478","PMID:21555462","PMID:18337471","PMID:21422230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"ciliary transition zone","termid":"GO:0035869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"NPHP complex","synonyms":[{"name":"NPHP module","type":"exact"}],"termid":"GO:1990957"}


id: PBO:0048546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth factor, augmenter of liver regeneration","termid":"PBO:0048546"}


id: PBO:0075492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily F member 2, pseudogene","termid":"PBO:0075492"}


id: PBO:0090237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG-box non-histone chromatin protein","termid":"PBO:0090237"}


id: PBO:0039356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidohydrolase domain containing 2","termid":"PBO:0039356"}


id: GO:0061628
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone reader that recognizes a histone H3 trimethylated at lysine 27.","definition_xrefs":["PMID:23948251","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 reader activity","termid":"GO:0140006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140566"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0140566","GO:0060090","GO:0003674","GO:0030674"],"is_obsolete":false,"name":"histone H3K27me3 reader activity","synonyms":[{"name":"H3-K27me3 modified histone binding","type":"narrow"},{"name":"H3K27me3 modified histone binding","type":"narrow"}],"termid":"GO:0061628"}


id: PBO:0072649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposon Gag like 1","termid":"PBO:0072649"}


id: GO:0034899
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N,N,N-trimethylamine + NADPH + H+ + O2 = N,N,N-trimethylamine N-oxide + NADP+ + H2O.","definition_xrefs":["UM-BBD_reactionID:r1407","EC:1.14.13.148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"trimethylamine monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R05623","RHEA:31979"],"termid":"GO:0034899"}


id: PBO:0002778
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cryptic Loci Regulator","termid":"PBO:0002778"}


id: GO:0034867
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4,4-trimethylpent-2-enoyl-CoA + H2O = 2,4,4-trimethyl-3-hydroxypentanoyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4,4-trimethylpent-2-enoyl-CoA hydratase activity (obsolete GO:0034867)","termid":"GO:0034867"}


id: GO:0005207
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete extracellular matrix glycoprotein (obsolete GO:0005207)","synonyms":[{"name":"extracellular matrix glycoprotein","type":"exact"}],"termid":"GO:0005207"}


id: GO:1905338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of cohesin unloading.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26687354"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cohesin unloading (obsolete GO:1905338)","synonyms":[{"name":"down regulation of cohesin unloading","type":"exact"},{"name":"down-regulation of cohesin unloading","type":"exact"},{"name":"downregulation of cohesin unloading","type":"exact"},{"name":"inhibition of cohesin unloading","type":"narrow"}],"termid":"GO:1905338"}


id: PBO:0056593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAM domain containing glycosylphosphatidylinositol anchor 2","termid":"PBO:0056593"}


id: PR:O13709
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC14C4.01c gene.","definition_xrefs":["UniProtKB:O13709","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C14C4.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.01c","synonyms":[{"name":"Spom972h-SPAC14C4.01c","type":"exact"}],"termid":"PR:O13709"}


id: MONDO:0012306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial restrictive cardiomyopathy","termid":"MONDO:0016340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, familial restrictive, 2","secondary_identifiers":["MESH:C566512","OMIM:609578","UMLS:C1865071","DOID:0111426","GARD:18071","MEDGEN:400673"],"synonyms":[{"name":"RCM2","type":"related"},{"name":"cardiomyopathy, familial restrictive, 2","type":"exact"}],"termid":"MONDO:0012306","xrefs":{"Monarch":{"xref_id":"0012306"}}}


id: GO:0050545
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-sulfopyruvate + H+ = CO2 + sulfoacetaldehyde.","definition_xrefs":["EC:4.1.1.79","RHEA:20948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"sulfopyruvate decarboxylase activity","secondary_identifiers":["MetaCyc:R231-RXN","KEGG_REACTION:R05774"],"synonyms":[{"name":"sulfopyruvate carboxy-lyase (2-sulfoacetaldehyde-forming)","type":"related"},{"name":"sulfopyruvate carboxy-lyase activity","type":"related"},{"name":"sulphopyruvate decarboxylase activity","type":"exact"}],"termid":"GO:0050545"}


id: PBO:0058244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4531","termid":"PBO:0058244"}


id: PBO:0062118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 45 (gene/pseudogene)","termid":"PBO:0062118"}


id: PBO:0004855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation specific 1,3-beta-glucanosyltransferase Gas4","termid":"PBO:0004855"}


id: GO:0170001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of ergothioneine from one side of a membrane to the other.","definition_xrefs":["PMID:15795384","PMID:20601551","PMID:29530864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ergothioneine transmembrane transporter activity","termid":"GO:0170001"}


id: GO:0018670
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-aminobenzoate + NADPH + H+ + O2 = 4-hydroxyaniline + NADP+ + H2O + CO2.","definition_xrefs":["EC:1.14.13.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"4-aminobenzoate 1-monooxygenase activity","secondary_identifiers":["MetaCyc:4-AMINOBENZOATE-1-MONOOXYGENASE-RXN","UM-BBD_reactionID:r0597"],"synonyms":[{"name":"4-aminobenzoate dehydrogenase activity","type":"related"},{"name":"4-aminobenzoate hydroxylase activity","type":"exact"},{"name":"4-aminobenzoate monooxygenase activity","type":"related"},{"name":"4-aminobenzoate,NAD(P)H:oxygen oxidoreductase (1-hydroxylating, decarboxylating)","type":"related"}],"termid":"GO:0018670"}


id: GO:0050660
data:
  {"annotated_genes":["SJAG_04032","SJAG_03240","SJAG_04270","SJAG_02496","SJAG_03712","SJAG_00370","SJAG_03804","SJAG_01693","SJAG_02599","SJAG_01671","SJAG_00972","SJAG_04743","SJAG_01063","SJAG_04054","SJAG_00265","SJAG_04367","SJAG_04608","SJAG_04042","SJAG_03236","SJAG_04459","SJAG_00174","SJAG_01162","SJAG_00235","SJAG_02827","SJAG_01466","SJAG_03290","SJAG_04000","SJAG_02489","SJAG_01903","SJAG_01041","SJAG_03985"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86907,87696,88664,88934,89504,93598,101032,102234,103291,104188,104719,107198,107966,109127,111299,112290,112751,116978,117917,118277],"is_not":false,"summary":null,"term":"GO:0050660"},{"annotations":[114247,100966,110320,107923,112505,102742,97909,96131,117506,114277,109177,111262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071949"}]},"cv_name":"molecular_function","definition":"Binding to FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.","definition_xrefs":["ISBN:0198506732","GOC:imk","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide binding","termid":"GO:0000166"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00174":null,"SJAG_00235":null,"SJAG_00265":null,"SJAG_00370":null,"SJAG_00972":null,"SJAG_01041":null,"SJAG_01063":null,"SJAG_01162":null,"SJAG_01466":null,"SJAG_01671":null,"SJAG_01693":null,"SJAG_01903":null,"SJAG_02489":null,"SJAG_02496":null,"SJAG_02599":null,"SJAG_02827":null,"SJAG_03236":null,"SJAG_03240":null,"SJAG_03290":null,"SJAG_03712":null,"SJAG_03804":null,"SJAG_03985":null,"SJAG_04000":null,"SJAG_04032":null,"SJAG_04042":null,"SJAG_04054":null,"SJAG_04270":null,"SJAG_04367":null,"SJAG_04459":null,"SJAG_04608":null,"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"flavin adenine dinucleotide binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"FAD or FADH2 binding","type":"exact"},{"name":"flavine-adenine dinucleotide binding","type":"exact"}],"termid":"GO:0050660","terms_by_termid":{"GO:0050660":null,"GO:0071949":null}}


id: PBO:0063083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-phosphoadenosine 5'-phosphosulfate synthase 2","termid":"PBO:0063083"}


id: MONDO:0005249
data:
  {"annotated_genes":["SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800029"}]},"cv_name":"mondo","definition":"An acute, acute and chronic, or chronic inflammation focally or diffusely affecting the lung parenchyma, caused by an infection in one or both of the lungs (by bacteria, viruses, fungi, or mycoplasma.). Symptoms include cough, shortness of breath, fevers, chills, chest pain, headache, sweating, and weakness.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"lung disorder","termid":"MONDO:0005275"},{"relation_name":"is_a","term_name":"respiratory tract infectious disorder","termid":"MONDO:0024355"},{"relation_name":"is_a","term_name":"pneumonitis","termid":"MONDO:0043905"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"pneumonia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C3333","SCTID:233604007","UMLS:C0032285","ICD10CM:J18.9","EFO:0003106","icd11.foundation:142052508","ICD9:486","ICD10CM:J15","DOID:552","ICD9:483","ICD9:484.8","MEDGEN:10813","ICD9:483.8","MESH:D011014"],"synonyms":[{"name":"acute pneumonia","type":"narrow"}],"termid":"MONDO:0005249","terms_by_termid":{"MONDO:0800029":null},"xrefs":{"Monarch":{"xref_id":"0005249"}}}


id: MONDO:0003109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the foramen magnum.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skull base meningioma","termid":"MONDO:0002998"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"foramen magnum meningioma","secondary_identifiers":["DOID:4708","MEDGEN:232512","NCIT:C5280","UMLS:C1333630"],"synonyms":[{"name":"foramen magnum meningioma (disease)","type":"exact"},{"name":"meningioma (disease) of foramen magnum","type":"exact"},{"name":"meningioma of Foramen magnum","type":"exact"},{"name":"meningioma of the Foramen magnum","type":"exact"}],"termid":"MONDO:0003109","xrefs":{"Monarch":{"xref_id":"0003109"}}}


id: MONDO:0003032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant vascular neoplasm arising from the superior vena cava.","definition_xrefs":["NCIT:C5378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vein disorder","termid":"MONDO:0004634"},{"relation_name":"is_a","term_name":"angiosarcoma","termid":"MONDO:0016982"},{"relation_name":"is_a","term_name":"great vessel cancer","termid":"MONDO:0040676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"superior vena cava angiosarcoma","secondary_identifiers":["UMLS:C1336530","DOID:4522","MEDGEN:234373"],"synonyms":[{"name":"angiosarcoma (disease) of anterior vena cava","type":"exact"},{"name":"angiosarcoma of Superior vena cava","type":"exact"},{"name":"angiosarcoma of the Superior vena cava","type":"exact"},{"name":"anterior vena cava angiosarcoma (disease)","type":"exact"}],"termid":"MONDO:0003032","xrefs":{"Monarch":{"xref_id":"0003032"}}}


id: MONDO:0006260
data:
  {"annotated_genes":["SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"}]},"cv_name":"mondo","definition":"A type of renal carcinoma affecting mostly young African-Americans. It is located in the medulla of the kidney, and follows an aggressive clinical course. Most reported cases have shown metastatic disease at the time of diagnosis.","definition_xrefs":["NCIT:C7572"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal cell carcinoma","termid":"MONDO:0005086"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"kidney medullary carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:888108","MONDO:0017888","ONCOTREE:MRC","GARD:13175","UMLS:C4049328","Orphanet:319319","NORD:1999","EFO:1000314","DOID:0070475","MedDRA:10064886"],"synonyms":[{"name":"Renal Medullary Carcinoma","type":"exact"},{"name":"carcinoma of renal medulla","type":"exact"},{"name":"kidney medullary carcinoma","type":"exact"},{"name":"renal medulla carcinoma","type":"exact"},{"name":"renal medullary carcinoma","type":"exact"}],"termid":"MONDO:0006260","terms_by_termid":{"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0006260"}}}


id: PBO:0068571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 22, pseudogene","termid":"PBO:0068571"}


id: PBO:0073932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 17 member 5","termid":"PBO:0073932"}


id: MONDO:1011339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Obstetric disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obstetric disorder, non-human animal","termid":"MONDO:1011339","xrefs":{"Monarch":{"xref_id":"1011339"}}}


id: PR:Q9URX7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein arginine N-methyltransferase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine N-methyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC890.07c","secondary_identifiers":["UniProtKB:Q9URX7"],"synonyms":[{"name":"Spom972h-PRMT1","type":"exact"},{"name":"type I PRMT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"type I protein arginine N-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9URX7"}


id: PBO:0086694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; in many strains, YML002W is continuous with YML003W, and is predicted to encode a single protein of 1090 aa with a full-length VPS9 domain; in strains S288C, W303, and CEN.PK, a single thymine residue is deleted near the 3' end of YML003W at ChrXIII:264337, causing a frameshift and premature stop codon, truncating YML003W","termid":"PBO:0086694"}


id: GO:0018860
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + anthranilate + CoA = AMP + diphosphate + anthranilyl-CoA.","definition_xrefs":["EC:6.2.1.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"anthranilate-CoA ligase activity","secondary_identifiers":["MetaCyc:AMINOBENZCOALIG-RXN","RHEA:10828","UM-BBD_reactionID:r0341","KEGG_REACTION:R00982"],"synonyms":[{"name":"2-aminobenzoate coenzyme A ligase activity","type":"related"},{"name":"2-aminobenzoate-CoA ligase activity","type":"related"},{"name":"2-aminobenzoate-coenzyme A ligase activity","type":"related"},{"name":"anthranilate--CoA ligase activity","type":"exact"},{"name":"anthranilate:CoA ligase (AMP-forming)","type":"related"},{"name":"anthraniloyl coenzyme A synthetase activity","type":"related"}],"termid":"GO:0018860"}


id: PBO:0053385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 312","termid":"PBO:0053385"}


id: GO:1902091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fumagillin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di","PMID:23488861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of fumagillin biosynthetic process","termid":"GO:1902090"},{"relation_name":"negatively_regulates","term_name":"fumagillin biosynthetic process","termid":"GO:1902086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"negative regulation of fumagillin biosynthetic process","synonyms":[{"name":"down regulation of fumagillin anabolism","type":"exact"},{"name":"down regulation of fumagillin biosynthesis","type":"exact"},{"name":"down regulation of fumagillin biosynthetic process","type":"exact"},{"name":"down regulation of fumagillin formation","type":"exact"},{"name":"down regulation of fumagillin synthesis","type":"exact"},{"name":"down-regulation of fumagillin anabolism","type":"exact"},{"name":"down-regulation of fumagillin biosynthesis","type":"exact"},{"name":"down-regulation of fumagillin biosynthetic process","type":"exact"},{"name":"down-regulation of fumagillin formation","type":"exact"},{"name":"down-regulation of fumagillin synthesis","type":"exact"},{"name":"downregulation of fumagillin anabolism","type":"exact"},{"name":"downregulation of fumagillin biosynthesis","type":"exact"},{"name":"downregulation of fumagillin biosynthetic process","type":"exact"},{"name":"downregulation of fumagillin formation","type":"exact"},{"name":"downregulation of fumagillin synthesis","type":"exact"},{"name":"inhibition of fumagillin anabolism","type":"exact"},{"name":"inhibition of fumagillin biosynthesis","type":"exact"},{"name":"inhibition of fumagillin biosynthetic process","type":"narrow"},{"name":"inhibition of fumagillin formation","type":"exact"},{"name":"inhibition of fumagillin synthesis","type":"exact"},{"name":"negative regulation of fumagillin anabolism","type":"exact"},{"name":"negative regulation of fumagillin biosynthesis","type":"exact"},{"name":"negative regulation of fumagillin formation","type":"exact"},{"name":"negative regulation of fumagillin synthesis","type":"exact"}],"termid":"GO:1902091"}


id: PBO:0071422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 28","termid":"PBO:0071422"}


id: PBO:0074438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 39","termid":"PBO:0074438"}


id: PBO:0049912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEXD intronic transcript 1","termid":"PBO:0049912"}


id: PBO:0068923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 166, pseudogene","termid":"PBO:0068923"}


id: GO:0052838
data:
  {"annotated_genes":["SJAG_00827"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052837"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving thiazole, a five-membered heterocyclic ring structure containing a sulfur in the 1-position and a nitrogen in the 3-position.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"oxazole or thiazole metabolic process","termid":"GO:0046484"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"thiazole metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"thiazole metabolism","type":"exact"}],"termid":"GO:0052838","terms_by_termid":{"GO:0052837":null}}


id: PBO:0002470
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6.1.19","termid":"PBO:0002470"}


id: PBO:0078306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (anticodon GTC) 2-11","termid":"PBO:0078306"}


id: PATO:0002341
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of being covered with short, dense, matted hairs.","definition_xrefs":["thefreedictionary:www.thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hairy","termid":"PATO:0000454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tomentose","termid":"PATO:0002341"}


id: GO:0044118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The progression of the symbiont from an initial condition to a later condition, occurring in its host's cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete development of symbiont in host cell (obsolete GO:0044118)","termid":"GO:0044118"}


id: GO:0046555
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the deacetylation of xylans and xylo-oligosaccharides.","definition_xrefs":["EC:3.1.1.72"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"acetylxylan esterase activity","secondary_identifiers":["MetaCyc:3.1.1.72-RXN"],"termid":"GO:0046555"}


id: FYPO:0005936
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of occurrence of intragenic meiotic recombination is normal (i.e. indistinguishable from wild type). Intragenic meiotic recombination can result in gene conversion events.","definition_xrefs":["PMID:19470480","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal intragenic meiotic recombination frequency","synonyms":[{"name":"normal meiotic intragenic recombination frequency","type":"exact"}],"termid":"FYPO:0005936"}


id: SO:0000528
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one D-gene, one DJ-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_D_DJ_cluster","synonyms":[{"name":"V D DJ cluster","type":"exact"},{"name":"V-D-(DJ)-CLUSTER","type":"exact"}],"termid":"SO:0000528"}


id: MONDO:0005305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epistaxis (obsolete MONDO:0005305)","termid":"MONDO:0005305","xrefs":{"Monarch":{"xref_id":"0005305"}}}


id: PBO:0027756
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_calcium_ion","termid":"PBO:0027756"}


id: MOD:01305
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to N1'-hexosaminyl-L-tryptophan.","definition_xrefs":["Unimod:454#W"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosaminylated residue","termid":"MOD:00876"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N1'-hexosaminylated tryptophan","synonyms":[{"name":"HexN","type":"related"},{"name":"Hexosamine","type":"related"}],"termid":"MOD:01305"}


id: MONDO:0022794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A structural cytogenetic abnormality characterized by partial or complete loss of chromosome 8.","definition_xrefs":["NCIT:C36535"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"monosomy","termid":"MONDO:0020639"}],"gene_count":0,"genotype_count":0,"name":"obsolete chromosome 8 deletion (obsolete MONDO:0022794)","secondary_identifiers":["MESH:C537823"],"synonyms":[{"name":"Anomaly of chromosome pair 8","type":"related"},{"name":"Deletions of chromosome 8","type":"related"},{"name":"del(8)","type":"related"},{"name":"loss of chromosome 8","type":"related"}],"termid":"MONDO:0022794","xrefs":{"Monarch":{"xref_id":"0022794"}}}


id: MONDO:0550003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant polycystic liver disease in which the cause of the disease is a mutation in the SEC61B gene.","definition_xrefs":["PMID:29038287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant polycystic liver disease","termid":"MONDO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0000426","MONDO:0004335"],"is_obsolete":false,"name":"SEC61B-related polycystic liver disease","termid":"MONDO:0550003","xrefs":{"Monarch":{"xref_id":"0550003"}}}


id: GO:0102928
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: beta-solanine + UDP-L-rhamnose = solanine + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-solanine rhamnosyltransferase activity (obsolete GO:0102928)","termid":"GO:0102928"}


id: RO:0002007
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"X outer_layer_of Y iff:\\n. X :continuant that bearer_of some PATO:laminar\\n. X part_of Y\\n. exists Z :surface\\n. X has_boundary Z\\n. Z boundary_of Y\\n\\nhas_boundary: http://purl.obolibrary.org/obo/RO_0002002\\nboundary_of: http://purl.obolibrary.org/obo/RO_0002000","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bounding_layer_of","termid":"RO:0002007"}


id: PBO:0055540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2976","termid":"PBO:0055540"}


id: MONDO:1011014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alexander disease that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Alexander disease, non-human animal","termid":"MONDO:1010242"},{"relation_name":"is_a","term_name":"leukodystrophy, dog","termid":"MONDO:1011005"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alexander disease, dog","secondary_identifiers":["OMIA:001208-9615"],"termid":"MONDO:1011014","xrefs":{"Monarch":{"xref_id":"1011014"}}}


id: GO:0009753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a jasmonic acid stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"},{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to jasmonic acid","synonyms":[{"name":"response to jasmonic acid stimulus","type":"exact"}],"termid":"GO:0009753"}


id: GO:0001808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of type IV hypersensitivity, a type of inflammatory response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type IV hypersensitivity","termid":"GO:0001807"},{"relation_name":"is_a","term_name":"negative regulation of T cell mediated immunity","termid":"GO:0002710"},{"relation_name":"is_a","term_name":"negative regulation of hypersensitivity","termid":"GO:0002884"},{"relation_name":"negatively_regulates","term_name":"type IV hypersensitivity","termid":"GO:0001806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of type IV hypersensitivity","synonyms":[{"name":"down regulation of type IV hypersensitivity","type":"exact"},{"name":"down-regulation of type IV hypersensitivity","type":"exact"},{"name":"downregulation of type IV hypersensitivity","type":"exact"},{"name":"inhibition of type IV hypersensitivity","type":"narrow"}],"termid":"GO:0001808"}


id: MONDO:0005864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm affecting the skeletal or smooth muscles. Malignant neoplasms arising from the skeletal muscles are called rhabdomyosarcomas. Malignant neoplasms arising from the smooth muscles are called leiomyosarcomas.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system cancer","termid":"MONDO:0000637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"muscle cancer","secondary_identifiers":["ICDO:8895/3","ICD9:171.9","MEDGEN:151927","EFO:0007384","DOID:4045","UMLS:C0684743","NCIT:C4883","SCTID:363495004"],"synonyms":[{"name":"cancer of muscle structure","type":"exact"},{"name":"malignant muscle neoplasm","type":"exact"},{"name":"malignant muscle structure neoplasm","type":"exact"},{"name":"malignant muscle tumor","type":"exact"},{"name":"malignant muscle tumour","type":"exact"},{"name":"malignant neoplasm of muscle","type":"exact"},{"name":"malignant neoplasm of muscle structure","type":"exact"},{"name":"malignant neoplasm of the muscle","type":"exact"},{"name":"malignant tumor of muscle","type":"exact"},{"name":"malignant tumor of the muscle","type":"exact"},{"name":"malignant tumour of muscle","type":"exact"},{"name":"malignant tumour of the muscle","type":"exact"},{"name":"muscle structure cancer","type":"exact"},{"name":"myosarcoma","type":"exact"}],"termid":"MONDO:0005864","xrefs":{"Monarch":{"xref_id":"0005864"}}}


id: PR:O74431
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cation-transporting ATPase 13A3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04373","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation-transporting ATPase C1672.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.11c","secondary_identifiers":["UniProtKB:O74431"],"synonyms":[{"name":"Spom972h-ATP13A3","type":"exact"}],"termid":"PR:O74431"}


id: GO:0030721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the spectrosome, a germline specific spherical organelle that is the precursor to the fusome.","definition_xrefs":["PMID:11131529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spectrosome organization","synonyms":[{"name":"spectrosome organisation","type":"exact"},{"name":"spectrosome organization and biogenesis","type":"related"}],"termid":"GO:0030721"}


id: MONDO:0020584
data:
  {"annotated_genes":["SJAG_02297","SJAG_05283","SJAG_04495","SJAG_00839","SJAG_04334","SJAG_02009","SJAG_02796","SJAG_04192","SJAG_00605"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010480"},{"annotations":[84949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009902"},{"annotations":[85168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009295"},{"annotations":[86556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009113"},{"annotations":[85672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013275"},{"annotations":[85954,85955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009340"},{"annotations":[85089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009950"},{"annotations":[85281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014221"}]},"cv_name":"mondo","definition":"Any form of anemia that results from the absence of, or the defective action of, any enzyme.","definition_xrefs":["NCIT:C35472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00605":null,"SJAG_00839":null,"SJAG_02009":null,"SJAG_02297":null,"SJAG_02796":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"anemia due to enzyme disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0494226","MEDGEN:105411"],"synonyms":[{"name":"anemia due to enzyme disorder","type":"exact"}],"termid":"MONDO:0020584","terms_by_termid":{"MONDO:0009113":null,"MONDO:0009295":null,"MONDO:0009340":null,"MONDO:0009902":null,"MONDO:0009950":null,"MONDO:0010480":null,"MONDO:0013275":null,"MONDO:0014221":null},"xrefs":{"Monarch":{"xref_id":"0020584"}}}


id: MONDO:0023275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cystic hamartoma of lung and kidney is a rare developmental malformation reported in 3 patients characterized by the presence of benign hamartomatous cysts in kidney and lung, clinically presenting as abdominal mass. Others associated features include hyperplastic nephromegaly, medullary dysplasia and mesoblastic nephroma. There have been no further descriptions in the literature since 1987.","definition_xrefs":["Orphanet:2111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney cancer","termid":"MONDO:0002367"},{"relation_name":"is_a","term_name":"lung cancer","termid":"MONDO:0008903"},{"relation_name":"is_a","term_name":"hamartoma of lung","termid":"MONDO:0021540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"Graham-Boyle-Troxell syndrome","secondary_identifiers":["SCTID:707530009","MESH:C537292","MEDGEN:444062","GARD:2557","ICD9:759.6","UMLS:C2931468"],"synonyms":[{"name":"Graham-Boyle-Troxell syndrome","type":"exact"},{"name":"cystic hamartoma of lung and kidney","type":"exact"},{"name":"cystic hamartomata of lung and kidney","type":"related"},{"name":"graham Boyle Troxell syndrome","type":"exact"}],"termid":"MONDO:0023275","xrefs":{"Monarch":{"xref_id":"0023275"}}}


id: GO:0042620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving poly(3-hydroxyalkanoates), polyesters of 3-hydroxyacids produced as intracellular granules by a large variety of bacteria.","definition_xrefs":["PMID:9925580","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(3-hydroxyalkanoate) metabolic process","synonyms":[{"name":"PHA metabolic process","type":"broad"},{"name":"PHA metabolism","type":"broad"},{"name":"poly(3-hydroxyalkanoate) metabolism","type":"exact"}],"termid":"GO:0042620"}


id: GO:1903196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-dopa biosynthetic process.","definition_xrefs":["GOC:bf","GOC:PARL","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of L-dopa biosynthetic process","termid":"GO:1903195"},{"relation_name":"is_a","term_name":"negative regulation of amino acid biosynthetic process","termid":"GO:2000283"},{"relation_name":"negatively_regulates","term_name":"L-dopa biosynthetic process","termid":"GO:1903185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"negative regulation of L-dopa biosynthetic process","synonyms":[{"name":"down regulation of L-dopa anabolism","type":"exact"},{"name":"down regulation of L-dopa biosynthesis","type":"exact"},{"name":"down regulation of L-dopa biosynthetic process","type":"exact"},{"name":"down regulation of L-dopa formation","type":"exact"},{"name":"down regulation of L-dopa synthesis","type":"exact"},{"name":"down-regulation of L-dopa anabolism","type":"exact"},{"name":"down-regulation of L-dopa biosynthesis","type":"exact"},{"name":"down-regulation of L-dopa biosynthetic process","type":"exact"},{"name":"down-regulation of L-dopa formation","type":"exact"},{"name":"down-regulation of L-dopa synthesis","type":"exact"},{"name":"downregulation of L-dopa anabolism","type":"exact"},{"name":"downregulation of L-dopa biosynthesis","type":"exact"},{"name":"downregulation of L-dopa biosynthetic process","type":"exact"},{"name":"downregulation of L-dopa formation","type":"exact"},{"name":"downregulation of L-dopa synthesis","type":"exact"},{"name":"inhibition of L-dopa anabolism","type":"narrow"},{"name":"inhibition of L-dopa biosynthesis","type":"narrow"},{"name":"inhibition of L-dopa biosynthetic process","type":"narrow"},{"name":"inhibition of L-dopa formation","type":"narrow"},{"name":"inhibition of L-dopa synthesis","type":"narrow"},{"name":"negative regulation of L-dopa anabolism","type":"exact"},{"name":"negative regulation of L-dopa biosynthesis","type":"exact"},{"name":"negative regulation of L-dopa formation","type":"exact"},{"name":"negative regulation of L-dopa synthesis","type":"exact"}],"termid":"GO:1903196"}


id: PBO:0004168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paxillin-like protein Pxl1","termid":"PBO:0004168"}


id: GO:0062170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform lutein.","definition_xrefs":["PMID:24397433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll metabolic process","termid":"GO:0016122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lutein metabolic process","synonyms":[{"name":"lutein metabolism","type":"exact"}],"termid":"GO:0062170"}


id: GO:0050516
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: ATP + 1D-myo-inositol 1,4,5-trisphosphate = ADP + 1D-myo-inositol 1,4,5,6-tetrakisphosphate, and ATP + 1D-myo-inositol 1,4,5,6-tetrakisphosphate = ADP + 1D-myo-inositol 1,3,4,5,6-pentakisphosphate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol polyphosphate multikinase activity (obsolete GO:0050516)","synonyms":[{"name":"inositol polyphosphate multikinase activity","type":"exact"},{"name":"inositol-polyphosphate multikinase activity","type":"exact"}],"termid":"GO:0050516"}


id: GO:0097368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of a structure near the basement membrane in adjacent Sertoli cells of the seminiferous epithelium for maintaining spermatogenesis. The structure consists of tight junctions, basal ectoplasmic specializations, and desmosome-like junctions.","definition_xrefs":["PMID:19509333","Wikipedia:Blood-testis_barrier","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sertoli cell development","termid":"GO:0060009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of Sertoli cell barrier","synonyms":[{"name":"establishment of BTB","type":"exact"},{"name":"establishment of SCB","type":"exact"},{"name":"establishment of blood-testis barrier","type":"exact"}],"termid":"GO:0097368"}


id: MONDO:0044967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease or disorder that involves the limb.","definition_xrefs":["MONDO:design_pattern"],"gene_count":0,"genotype_count":0,"name":"obsolete limb disorder (obsolete MONDO:0044967)","secondary_identifiers":["ICD9:V49.1","SCTID:128605003"],"synonyms":[{"name":"disease of limb","type":"exact"},{"name":"disease or disorder of limb","type":"exact"},{"name":"disorder of extremity","type":"exact"},{"name":"disorder of limb","type":"exact"},{"name":"limb disease","type":"exact"},{"name":"limb disease or disorder","type":"exact"}],"termid":"MONDO:0044967","xrefs":{"Monarch":{"xref_id":"0044967"}}}


id: FYPO:0006531
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype which protein degradation begins later than normal during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein degradation","termid":"FYPO:0002275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of protein degradation during meiosis","synonyms":[{"name":"delayed onset of protein breakdown during meiosis","type":"exact"},{"name":"delayed onset of protein catabolic process during meiosis","type":"exact"},{"name":"delayed onset of protein catabolism during meiosis","type":"exact"},{"name":"delayed onset of protein degradation during meiotic nuclear division","type":"exact"},{"name":"delayed protein degradation during meiosis","type":"exact"}],"termid":"FYPO:0006531"}


id: PBO:0056613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male-enhanced antigen 1","termid":"PBO:0056613"}


id: MONDO:0021239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the urethra.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urethral disorder","termid":"MONDO:0004184"},{"relation_name":"is_a","term_name":"urinary system neoplasm","termid":"MONDO:0021066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urethra neoplasm","secondary_identifiers":["NCIT:C3428","MEDGEN:12014","UMLS:C0041971","EFO:0003846"],"synonyms":[{"name":"neoplasm of the urethra","type":"exact"},{"name":"neoplasm of urethra","type":"exact"},{"name":"neoplasms. urethra","type":"exact"},{"name":"tumor of the urethra","type":"exact"},{"name":"tumor of urethra","type":"exact"},{"name":"tumors. urethra","type":"exact"},{"name":"tumour of the urethra","type":"exact"},{"name":"tumour of urethra","type":"exact"},{"name":"urethra neoplasm (disease)","type":"exact"},{"name":"urethra neoplasms","type":"exact"},{"name":"urethra tumor","type":"exact"},{"name":"urethra tumors","type":"exact"},{"name":"urethra tumour","type":"exact"},{"name":"urethra tumours","type":"exact"},{"name":"urethral neoplasm","type":"exact"},{"name":"urethral neoplasms","type":"exact"},{"name":"urethral tumor","type":"exact"},{"name":"urethral tumors","type":"exact"},{"name":"urethral tumour","type":"exact"},{"name":"urethral tumours","type":"exact"}],"termid":"MONDO:0021239","xrefs":{"Monarch":{"xref_id":"0021239"}}}


id: PBO:0062645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily P member 1 pseudogene","termid":"PBO:0062645"}


id: PBO:0027093
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rDNA_copy_number","termid":"PBO:0027093"}


id: GO:1990479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipoic acid stimulus.","definition_xrefs":["PMID:23232760"],"gene_count":0,"genotype_count":0,"name":"obsolete response to lipoic acid (obsolete GO:1990479)","synonyms":[{"name":"response to 5-(1,2-dithiolan-3-yl)pentanoic acid","type":"exact"}],"termid":"GO:1990479"}


id: SO:0002052
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant where the mutated gene product adversely affects the other (wild type) gene product.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_abnormal","termid":"SO:0002218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dominant_negative_variant","synonyms":[{"name":"dominant negative","type":"exact"},{"name":"dominant negative variant","type":"exact"}],"termid":"SO:0002052"}


id: PBO:0082574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chitin synthase II; catalyzes transfer of N-acetylglucosamine (GlcNAc) to chitin upon activation of zymogenic form; required for chitin synthesis in the primary septum during cytokinesis; localization regulated by Cdk1p during mitosis; phosphorylation by Dbf2p kinase regulates its dynamics and chitin synthesis during cytokinesis","termid":"PBO:0082574"}


id: GO:0071287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a manganese ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to manganese ion","termid":"GO:0010042"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to manganese ion","synonyms":[{"name":"cellular response to manganese","type":"exact"}],"termid":"GO:0071287"}


id: PBO:0043806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic mesoderm regulator","termid":"PBO:0043806"}


id: MONDO:1011840
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta 9-tetrahydrocannabinol seizure, non-human animal","secondary_identifiers":["OMIA:000267"],"termid":"MONDO:1011840","xrefs":{"Monarch":{"xref_id":"1011840"}}}


id: PBO:0086012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; mRNA identified as translated by ribosome profiling data; overlaps the verified gene DIA1/YMR316W","termid":"PBO:0086012"}


id: GO:0106091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of creating an elongation or projection from a glial cell.","definition_xrefs":["PMID:27131624","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection morphogenesis","termid":"GO:0048858"},{"relation_name":"part_of","term_name":"glial cell development","termid":"GO:0021782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell projection elongation","termid":"GO:0106091"}


id: PBO:0069091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 338, pseudogene","termid":"PBO:0069091"}


id: PBO:0002646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyltransferase complex subunit Alg9 (predicted)","termid":"PBO:0002646"}


id: GO:0034907
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: acetanilide + O2 + 2 H+ + NADH = catechol + NAD+ + acetamide.","definition_xrefs":["UM-BBD_reactionID:r0723"],"gene_count":0,"genotype_count":0,"name":"obsolete acetanilide 1,2-dioxygenase activity (obsolete GO:0034907)","termid":"GO:0034907"}


id: PBO:0041031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic charge Y-linked 2","termid":"PBO:0041031"}


id: GO:0019757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving glycosinolates, substituted thioglycosides found in rapeseed products and related cruciferae.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete glycosinolate metabolic process (obsolete GO:0019757)","synonyms":[{"name":"glycosinolate metabolism","type":"exact"}],"termid":"GO:0019757"}


id: PBO:0079483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin","termid":"PBO:0079483"}


id: GO:0010078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism retains a population of root meristem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of meristem identity","termid":"GO:0010074"},{"relation_name":"part_of","term_name":"root morphogenesis","termid":"GO:0010015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of root meristem identity","termid":"GO:0010078"}


id: PBO:0071389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 12","termid":"PBO:0071389"}


id: GO:0003244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenic growth in which the right ventricle grows along a radial axis.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth involved in heart morphogenesis","termid":"GO:0003241"},{"relation_name":"part_of","term_name":"cardiac right ventricle morphogenesis","termid":"GO:0003215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"radial growth involved in right ventricle morphogenesis","termid":"GO:0003244"}


id: GO:0097719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of neural tissue following its loss or destruction.","definition_xrefs":["Wikipedia:Neuroregeneration"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue regeneration","termid":"GO:0042246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural tissue regeneration","synonyms":[{"name":"neuroregeneration","type":"related"}],"termid":"GO:0097719"}


id: MONDO:0032014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A set of phenotypic abnormalities presenting in a subset of patients under particular circumstances.","definition_xrefs":["Orphanet:377793"],"gene_count":0,"genotype_count":0,"name":"obsolete particular clinical situation in a disease or syndrome (obsolete MONDO:0032014)","termid":"MONDO:0032014","xrefs":{"Monarch":{"xref_id":"0032014"}}}


id: PBO:0005169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase activator Mob2","termid":"PBO:0005169"}


id: PBO:0003930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE associated Golgi protein (predicted)","termid":"PBO:0003930"}


id: GO:0016079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of intracellular membrane-bounded vesicles with the pre-synaptic membrane of the neuronal cell resulting in release of neurotransmitter into the synaptic cleft.","definition_xrefs":["GOC:jid","GOC:lmg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulated exocytosis","termid":"GO:0045055"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"vesicle-mediated transport in synapse","termid":"GO:0099003"},{"relation_name":"is_a","term_name":"signal release from synapse","termid":"GO:0099643"},{"relation_name":"part_of","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"part_of","term_name":"synaptic vesicle cycle","termid":"GO:0099504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0016192","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"synaptic vesicle exocytosis","termid":"GO:0016079"}


id: MONDO:0015528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital gingival tumor that occurs along the alveolar ridge of the maxilla. It usually affects female infants. The histogenesis is unknown. Morphologically, it is characterized by the presence of large cells with eosinophilic granular cytoplasm. Complete surgical resection is curative.","definition_xrefs":["NCIT:C4675"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"mesenchymal cell neoplasm","termid":"MONDO:0002616"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"epulis","termid":"MONDO:0003396"},{"relation_name":"is_a","term_name":"granular cell tumor","termid":"MONDO:0006235"},{"relation_name":"is_a","term_name":"soft tissue neoplasm","termid":"MONDO:0006424"},{"relation_name":"is_a","term_name":"hamartoma","termid":"MONDO:0006499"},{"relation_name":"is_a","term_name":"gingival neoplasm","termid":"MONDO:0021086"},{"relation_name":"is_a","term_name":"neoplasm of jaw","termid":"MONDO:0021580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital epulis","secondary_identifiers":["DOID:8303","Orphanet:157826","GARD:20016","icd11.foundation:1616915738","MESH:D005887","DOID:7280","MEDGEN:83962","UMLS:C0376319","SCTID:360525006"],"synonyms":[{"name":"Neumann tumor","type":"exact"},{"name":"Neumann tumour","type":"exact"},{"name":"congenital Epulides","type":"exact"},{"name":"congenital epulis","type":"exact"},{"name":"congenital gingival cell tumor","type":"exact"},{"name":"congenital gingival cell tumour","type":"exact"},{"name":"congenital granular cell tumor","type":"exact"},{"name":"congenital granular cell tumour","type":"exact"},{"name":"gingival granular cell tumor","type":"related"},{"name":"gingival granular cell tumour","type":"related"}],"termid":"MONDO:0015528","xrefs":{"Monarch":{"xref_id":"0015528"}}}


id: MONDO:0018297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypotonia-speech impairment-severe cognitive delay syndrome (obsolete MONDO:0018297)","termid":"MONDO:0018297","xrefs":{"Monarch":{"xref_id":"0018297"}}}


id: MONDO:0006200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A uveal melanoma characterized by the presence of malignant large epithelioid melanocytes.","definition_xrefs":["NCIT:C35780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelioid cell melanoma","termid":"MONDO:0002973"},{"relation_name":"is_a","term_name":"uveal melanoma","termid":"MONDO:0006486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"epithelioid cell uveal melanoma","secondary_identifiers":["DOID:7040","EFO:1000244","UMLS:C1333422","MEDGEN:234223"],"synonyms":[{"name":"epithelioid cell melanoma of uvea","type":"exact"},{"name":"epithelioid cell uveal melanoma","type":"exact"},{"name":"uvea epithelioid cell melanoma","type":"exact"},{"name":"uveal epithelioid cell melanoma","type":"exact"}],"termid":"MONDO:0006200","xrefs":{"Monarch":{"xref_id":"0006200"}}}


id: PBO:0030381
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_cycloheximide","termid":"PBO:0030381"}


id: PBO:0060845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal growth regulator 1","termid":"PBO:0060845"}


id: FYPO:0006227
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the plasma membrane potential, i.e. the electric potential existing across the plasma membrane, is abnormal.","definition_xrefs":["PomBase:mah","PMID:16164595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal plasma membrane during vegetative growth","termid":"FYPO:0003278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal plasma membrane potential","synonyms":[{"name":"abnormal plasma membrane polarization","type":"exact"},{"name":"abnormal plasma membrane potential during mitotic cell cycle","type":"related"},{"name":"abnormal plasma membrane potential during vegetative growth","type":"exact"}],"termid":"FYPO:0006227"}


id: PBO:0044708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 6 pseudogene 2","termid":"PBO:0044708"}


id: MOD:00731
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"a protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a ribose sugar group through a glycosidic bond","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosylated residue","termid":"MOD:00729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"ribosylated","synonyms":[{"name":"Rib","type":"exact"}],"termid":"MOD:00731"}


id: GO:1901313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of gene expression involved in extracellular matrix organization.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of gene expression involved in extracellular matrix organization (obsolete GO:1901313)","synonyms":[{"name":"activation of expression of extracellular matrix proteins","type":"exact"},{"name":"activation of extracellular matrix protein production","type":"related"},{"name":"activation of gene expression involved in extracellular matrix organization","type":"narrow"},{"name":"positive regulation of expression of extracellular matrix proteins","type":"exact"},{"name":"positive regulation of extracellular matrix protein production","type":"related"},{"name":"up regulation of expression of extracellular matrix proteins","type":"exact"},{"name":"up regulation of extracellular matrix protein production","type":"related"},{"name":"up regulation of gene expression involved in extracellular matrix organization","type":"exact"},{"name":"up-regulation of expression of extracellular matrix proteins","type":"exact"},{"name":"up-regulation of extracellular matrix protein production","type":"related"},{"name":"up-regulation of gene expression involved in extracellular matrix organization","type":"exact"},{"name":"upregulation of expression of extracellular matrix proteins","type":"exact"},{"name":"upregulation of extracellular matrix protein production","type":"related"},{"name":"upregulation of gene expression involved in extracellular matrix organization","type":"exact"}],"termid":"GO:1901313"}


id: GO:0008800
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a beta-lactam + H2O = a substituted beta-amino acid.","definition_xrefs":["EC:3.5.2.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"beta-lactamase activity","secondary_identifiers":["RHEA:20401","MetaCyc:BETA-LACTAMASE-RXN"],"synonyms":[{"name":"ampicillinase activity","type":"related"},{"name":"beta-lactam hydrolase activity","type":"related"},{"name":"beta-lactamase A, B, C","type":"related"},{"name":"beta-lactamase AME I","type":"related"},{"name":"beta-lactamase I-III","type":"related"},{"name":"cephalosporin-beta-lactamase activity","type":"related"},{"name":"exopenicillinase activity","type":"related"},{"name":"neutrapen","type":"related"},{"name":"penicillin amido-beta-lactamhydrolase activity","type":"related"},{"name":"penicillin beta-lactamase activity","type":"related"},{"name":"penicillinase I, II","type":"related"}],"termid":"GO:0008800"}


id: PBO:0048683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLI family zinc finger 2","termid":"PBO:0048683"}


id: PBO:0036090
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondrial_aggregation_during_cellular_response_to_reactive_oxygen_species","termid":"PBO:0036090"}


id: GO:0006298
data:
  {"annotated_genes":["SJAG_02748","SJAG_02261","SJAG_03722","SJAG_01620","SJAG_02039","SJAG_01419","SJAG_01887","SJAG_01049","SJAG_01832","SJAG_01262","SJAG_01807","SJAG_02226","SJAG_02187","SJAG_04410","SJAG_04190"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87763,88069,91245,94351,100079,103728,104072,105430,105559,107242,115179,115751,115937,116639],"is_not":false,"summary":null,"term":"GO:0006298"},{"annotations":[91244,107241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000710"},{"annotations":[97612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070716"},{"annotations":[97614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990516"}]},"cv_name":"biological_process","definition":"A system for the correction of errors in which an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination.","definition_xrefs":["ISBN:0198506732","PMID:11687886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair","termid":"GO:0006281"}],"gene_count":15,"genes_by_uniquename":{"SJAG_01049":null,"SJAG_01262":null,"SJAG_01419":null,"SJAG_01620":null,"SJAG_01807":null,"SJAG_01832":null,"SJAG_01887":null,"SJAG_02039":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02261":null,"SJAG_02748":null,"SJAG_03722":null,"SJAG_04190":null,"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"mismatch repair","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:DNA_mismatch_repair","GO:0006300","Reactome:R-HSA-5358508"],"synonyms":[{"name":"MMR","type":"exact"},{"name":"MutS/MutL/MutH pathway","type":"related"},{"name":"long patch mismatch repair system","type":"narrow"},{"name":"mismatch repair, MutL-like pathway","type":"related"}],"termid":"GO:0006298","terms_by_termid":{"GO:0000710":null,"GO:0006298":null,"GO:0070716":null,"GO:1990516":null}}


id: PBO:0061647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUDT19 pseudogene 5","termid":"PBO:0061647"}


id: MONDO:0002982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A small round cell tumor with neural differentiation arising from the soft tissues.","definition_xrefs":["NCIT:C27471"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"extraskeletal Ewing sarcoma","termid":"MONDO:0018270"},{"relation_name":"is_a","term_name":"peripheral primitive neuroectodermal tumor","termid":"MONDO:0018271"},{"relation_name":"is_a","term_name":"extraskeletal Ewing sarcoma/peripheral primitive neuroectodermal tumor","termid":"MONDO:0021039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"peripheral primitive neuroectodermal tumor of soft tissues","secondary_identifiers":["DOID:4389","UMLS:C1112437","MEDGEN:205115"],"synonyms":[{"name":"peripheral neuroectodermal tumor of soft tissues","type":"exact"},{"name":"peripheral neuroectodermal tumor of the soft tissues","type":"exact"},{"name":"peripheral neuroectodermal tumour of soft tissues","type":"exact"},{"name":"peripheral neuroectodermal tumour of the soft tissues","type":"exact"},{"name":"peripheral neuroepithelioma of soft tissues","type":"exact"},{"name":"peripheral neuroepithelioma of the soft tissues","type":"exact"},{"name":"peripheral primitive neuroectodermal tumor of soft tissues","type":"exact"},{"name":"soft tissue peripheral neuroepithelioma","type":"related"}],"termid":"MONDO:0002982","xrefs":{"Monarch":{"xref_id":"0002982"}}}


id: PBO:0003272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1-5,6,7,8-tetrahydrofolate (THF) synthase","termid":"PBO:0003272"}


id: GO:0002108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 5S rRNA in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of LSU-rRNA","termid":"GO:0000470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0042254","GO:0044085"],"is_obsolete":false,"name":"maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S)","termid":"GO:0002108"}


id: PBO:0085689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in regulation of cell wall composition and integrity; also involved in cell wall response to osmotic stress; overproduction suppresses a lysis sensitive PKC mutation; HLR1 has a paralog, LRE1, that arose from the whole genome duplication","termid":"PBO:0085689"}


id: GO:0102553
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 S-adenosyl-L-methionine + a [pyruvate dehydrogenase E2 protein] N6-octanoyl-L-lysine + 2 a sulfurated [sulfur carrier] = 2 L-methionine + 2 5'-deoxyadenosine + 2 H+ + a [pyruvate dehydrogenase E2 protein] N6-lipoyl-L-lysine + 2 an unsulfurated [sulfur carrier].","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete lipoyl synthase activity (acting on pyruvate dehydrogenase E2 protein) (obsolete GO:0102553)","termid":"GO:0102553"}


id: GO:1900984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of vindoline.","definition_xrefs":["MetaCyc:PWY-5292","GOC:TermGenie","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete vindoline catabolic process (obsolete GO:1900984)","synonyms":[{"name":"vindoline breakdown","type":"exact"},{"name":"vindoline catabolism","type":"exact"},{"name":"vindoline degradation","type":"exact"}],"termid":"GO:1900984"}


id: MONDO:0957822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 22","secondary_identifiers":["OMIM:620548","UMLS:C5882707","MEDGEN:1849005"],"termid":"MONDO:0957822","xrefs":{"Monarch":{"xref_id":"0957822"}}}


id: GO:0017069
data:
  {"annotated_genes":["SJAG_01327","SJAG_04911","SJAG_05240","SJAG_03547","SJAG_00559","SJAG_03983","SJAG_03954","SJAG_03460","SJAG_03070","SJAG_01819","SJAG_00531","SJAG_03210","SJAG_05009","SJAG_04497","SJAG_03214","SJAG_00414","SJAG_02185","SJAG_04898","SJAG_02469","SJAG_04117"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104986,107527],"is_not":false,"summary":null,"term":"GO:0017069"},{"annotations":[112775,97513,110134,91051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030619"},{"annotations":[97514,115908,105840,115371,105010,95316,101241,112386,112147,114436,108032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030620"},{"annotations":[92435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030621"},{"annotations":[97515,106044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030623"},{"annotations":[92436,97516,108033,116718,96332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017070"}]},"cv_name":"molecular_function","definition":"Binding to a small nuclear RNA (snRNA).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00414":null,"SJAG_00531":null,"SJAG_00559":null,"SJAG_01327":null,"SJAG_01819":null,"SJAG_02185":null,"SJAG_02469":null,"SJAG_03070":null,"SJAG_03210":null,"SJAG_03214":null,"SJAG_03460":null,"SJAG_03547":null,"SJAG_03954":null,"SJAG_03983":null,"SJAG_04117":null,"SJAG_04497":null,"SJAG_04898":null,"SJAG_04911":null,"SJAG_05009":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"snRNA binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000945"],"synonyms":[{"name":"base pairing with snRNA","type":"narrow"},{"name":"small nuclear RNA binding","type":"exact"}],"termid":"GO:0017069","terms_by_termid":{"GO:0017069":null,"GO:0017070":null,"GO:0030619":null,"GO:0030620":null,"GO:0030621":null,"GO:0030623":null}}


id: PBO:0075583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine peptidase inhibitor Kazal type 7","termid":"PBO:0075583"}


id: PR:Q8NKC2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eno102 gene.","definition_xrefs":["UniProtKB:Q8NKC2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase 1-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB21E7.01c","synonyms":[{"name":"2-phospho-D-glycerate hydro-lyase 1-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"2-phosphoglycerate dehydratase 1-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-eno102","type":"exact"}],"termid":"PR:Q8NKC2"}


id: GO:0170056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholesterol + H+ + NAD(P)H + O2 = 7-dehydrocholesterol + 2 H2O + NAD(P)+.","definition_xrefs":["PMID:31521708","PMID:21632547","RHEA:51644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cholesterol 7-desaturase (NAD(P)H) activity","secondary_identifiers":["EC:1.14.19.21","MetaCyc:RXN-16379"],"synonyms":[{"name":"C-7 cholesterol dehydrogenase","type":"exact"},{"name":"cholesterol 7,8-dehydrogenase","type":"exact"}],"termid":"GO:0170056"}


id: GO:0071411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fluoxetine stimulus. Fluoxetine increases the extracellular level of the neurotransmitter serotonin by inhibiting its reuptake into the presynaptic cell, increasing the level of serotonin available to bind to the postsynaptic receptor.","definition_xrefs":["GOC:mah","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fluoxetine","termid":"GO:0014076"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to fluoxetine","termid":"GO:0071411"}


id: PBO:0027681
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_transcription","termid":"PBO:0027681"}


id: PBO:0066451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REXO1 like 3, pseudogene","termid":"PBO:0066451"}


id: MOD:00985
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a hydrogen atom of an L-tyrosine residue with a halogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogen containing residue","termid":"MOD:00694"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"halogenated tyrosine","synonyms":[{"name":"HalTyr","type":"exact"}],"termid":"MOD:00985"}


id: PBO:0044067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin 11","termid":"PBO:0044067"}


id: GO:0005875
data:
  {"annotated_genes":["SJAG_01370","SJAG_00113","SJAG_01662","SJAG_01739","SJAG_03673","SJAG_00332","SJAG_01613","SJAG_00397","SJAG_04841","SJAG_00140","SJAG_01837","SJAG_02286","SJAG_05185","SJAG_02561","SJAG_00773","SJAG_02336","SJAG_02807","SJAG_04745","SJAG_00697","SJAG_00930","SJAG_04412","SJAG_01546","SJAG_01297"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94249,96766],"is_not":false,"summary":null,"term":"GO:0005875"},{"annotations":[108698,116152,118181,111379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032133"},{"annotations":[100219,110890,97063,87226,90467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005868"},{"annotations":[79922,94685,102464,110537,113438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005869"},{"annotations":[88428,90628,103037,96249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005871"},{"annotations":[107729,103384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016938"},{"annotations":[98714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005872"},{"annotations":[103392,107737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005873"}]},"cv_name":"cellular_component","definition":"Any multimeric complex connected to a microtubule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"microtubule cytoskeleton","termid":"GO:0015630"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00332":null,"SJAG_00397":null,"SJAG_00697":null,"SJAG_00773":null,"SJAG_00930":null,"SJAG_01297":null,"SJAG_01370":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01662":null,"SJAG_01739":null,"SJAG_01837":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02561":null,"SJAG_02807":null,"SJAG_03673":null,"SJAG_04412":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_05185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0015630"],"is_obsolete":false,"name":"microtubule associated complex","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000107":null},"termid":"GO:0005875","terms_by_termid":{"GO:0005868":null,"GO:0005869":null,"GO:0005871":null,"GO:0005872":null,"GO:0005873":null,"GO:0005875":null,"GO:0016938":null,"GO:0032133":null}}


id: PBO:0049132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPRIN family member 3","termid":"PBO:0049132"}


id: PBO:0056917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MINDY2 divergent transcript","termid":"PBO:0056917"}


id: GO:0006449
data:
  {"annotated_genes":["SJAG_05265","SJAG_00642","SJAG_02189","SJAG_02812"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111206],"is_not":false,"summary":null,"term":"GO:0006449"},{"annotations":[108656,94291,108655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045905"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translational termination.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"},{"relation_name":"is_a","term_name":"regulation of protein-containing complex disassembly","termid":"GO:0043244"},{"relation_name":"regulates","term_name":"translational termination","termid":"GO:0006415"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00642":null,"SJAG_02189":null,"SJAG_02812":null,"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translational termination","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006449","terms_by_termid":{"GO:0006449":null,"GO:0045905":null}}


id: MONDO:0018095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Weaver-Williams syndrome is a multiple congenital anomalies syndrome characterized by moderate-to-severe intellectual disability, decreased muscle mass, microcephaly, facial dysmorphism (prominent ears, midfacial hypoplasia, small mouth and cleft palate), clinodactyly of the fingers, delayed osseous maturation and generalized bone hypoplasia. The syndrome has been described in a brother and sister and an autosomal recessive mode of inheritance has been suggested. There have been no further descriptions in the literature since 1977.","definition_xrefs":["Orphanet:3448"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Weaver-Williams syndrome","secondary_identifiers":["UMLS:C0796198","GARD:5545","MEDGEN:1392915"],"termid":"MONDO:0018095","xrefs":{"Monarch":{"xref_id":"0018095"}}}


id: PBO:0065252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 20E","termid":"PBO:0065252"}


id: GO:0015482
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete voltage-gated anion channel porin activity (obsolete GO:0015482)","synonyms":[{"name":"voltage-dependent anion channel porin activity","type":"exact"},{"name":"voltage-gated anion channel porin activity","type":"exact"}],"termid":"GO:0015482"}


id: PBO:0042114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 186","termid":"PBO:0042114"}


id: GO:0032966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of collagen metabolic process","termid":"GO:0010713"},{"relation_name":"is_a","term_name":"regulation of collagen biosynthetic process","termid":"GO:0032965"},{"relation_name":"negatively_regulates","term_name":"collagen biosynthetic process","termid":"GO:0032964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of collagen biosynthetic process","synonyms":[{"name":"negative regulation of collagen anabolism","type":"exact"},{"name":"negative regulation of collagen biosynthesis","type":"exact"},{"name":"negative regulation of collagen formation","type":"exact"},{"name":"negative regulation of collagen synthesis","type":"exact"}],"termid":"GO:0032966"}


id: PR:O14267
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC7D4.12c gene.","definition_xrefs":["UniProtKB:O14267","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized UPF0442 protein C7D4.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.12c","synonyms":[{"name":"Spom972h-SPAC7D4.12c","type":"exact"}],"termid":"PR:O14267"}


id: PBO:0030319
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_oleoyl-CoA_ligase_activity","termid":"PBO:0030319"}


id: GO:0051957
data:
  {"annotated_genes":["SJAG_05346","SJAG_03591","SJAG_00991","SJAG_02605"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92812,98379,91226,110030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[92813,91227,98380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[92814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the directed movement of amino acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amine transport","termid":"GO:0051954"},{"relation_name":"is_a","term_name":"regulation of amino acid transport","termid":"GO:0051955"},{"relation_name":"positively_regulates","term_name":"amino acid transport","termid":"GO:0006865"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of amino acid transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of amino acid transport","type":"narrow"},{"name":"positive regulation of amino acid transmembrane transport","type":"exact"},{"name":"stimulation of amino acid transport","type":"narrow"},{"name":"up regulation of amino acid transport","type":"exact"},{"name":"up-regulation of amino acid transport","type":"exact"},{"name":"upregulation of amino acid transport","type":"exact"}],"termid":"GO:0051957","terms_by_termid":{"GO:1905534":null,"GO:1905589":null,"GO:1905626":null}}


id: MOD:01480
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue into an 5'-fluoro-L-tryptophan.","definition_xrefs":["PubMed:18688235","PubMed:8172898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monofluorinated L-tryptophan","termid":"MOD:01226"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-fluoro-L-tryptophan","synonyms":[{"name":"5-fluorotryptophan","type":"exact"}],"termid":"MOD:01480"}


id: PBO:0047244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 236 member D","termid":"PBO:0047244"}


id: GO:0042454
data:
  {"annotated_genes":["SJAG_03771","SJAG_02959","SJAG_02580","SJAG_01673"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87061,87062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"},{"annotations":[88671,107865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any ribonucleoside, a nucleoside in which purine or pyrimidine base is linked to a ribose (beta-D-ribofuranose) molecule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside metabolic process","termid":"GO:0009119"},{"relation_name":"is_a","term_name":"nucleoside catabolic process","termid":"GO:0009164"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01673":null,"SJAG_02580":null,"SJAG_02959":null,"SJAG_03771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"ribonucleoside catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ribonucleoside breakdown","type":"exact"},{"name":"ribonucleoside catabolism","type":"exact"},{"name":"ribonucleoside degradation","type":"exact"}],"termid":"GO:0042454","terms_by_termid":{"GO:0006154":null,"GO:0009972":null}}


id: GO:1902345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of maltose transport.","definition_xrefs":["GOC:TermGenie","PMID:23770568","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of maltose transport","termid":"GO:1902343"},{"relation_name":"positively_regulates","term_name":"maltose transport","termid":"GO:0015768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of maltose transport","synonyms":[{"name":"activation of maltose transport","type":"narrow"},{"name":"up regulation of maltose transport","type":"exact"},{"name":"up-regulation of maltose transport","type":"exact"},{"name":"upregulation of maltose transport","type":"exact"}],"termid":"GO:1902345"}


id: GO:0000408
data:
  {"annotated_genes":["SJAG_06560","SJAG_04182","SJAG_02863","SJAG_04201","SJAG_00378"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97782,98958,100632,103642,115814],"is_not":false,"summary":null,"term":"GO:0000408"}]},"cv_name":"cellular_component","definition":"A protein complex involved in t6A tRNA modification. For example, in Saccharomyces cerevisiae the complex contains Bud32p, Kae1p, Gon7p, Cgi121p, and Pcc1p.","definition_xrefs":["PMID:23945934","PMID:16564010","PMID:21183954","GOC:elh","GOC:vw","PMID:16874308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00378":null,"SJAG_02863":null,"SJAG_04182":null,"SJAG_04201":null,"SJAG_06560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"EKC/KEOPS complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"KEOPS/EKC complex","type":"exact"},{"name":"TCTC","type":"related"},{"name":"endopeptidase-like kinase chromatin-associated protein complex","type":"exact"},{"name":"kinase, putative endopeptidase and other proteins of small size protein complex","type":"exact"},{"name":"threonyl-carbamoly transferase complex","type":"related"}],"termid":"GO:0000408","terms_by_termid":{"GO:0000408":null}}


id: GO:0021539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the subthalamus over time, from its formation to the mature structure. The subthalamus is the anterior part of the diencephalon that lies between the thalamus, hypothalamus, and tegmentum of the mesencephalon, including subthalamic nucleus, zona incerta, the fields of Forel, and the nucleus of ansa lenticularis.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:jid","GOC:dph","ISBN:0838580343","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"diencephalon development","termid":"GO:0021536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"subthalamus development","synonyms":[{"name":"ventral thalamus development","type":"related"}],"termid":"GO:0021539"}


id: GO:0031600
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multisubunit complex located in the cytosol of a cell, which caps one or both ends of the proteasome core complex. This complex recognizes, unfolds ubiquitinated proteins and translocates them to the proteasome core complex.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome regulatory particle","termid":"GO:0005838"},{"relation_name":"part_of","term_name":"cytosolic proteasome complex","termid":"GO:0031597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005829","GO:0005737"],"is_obsolete":false,"name":"cytosolic proteasome regulatory particle","termid":"GO:0031600"}


id: PBO:0086758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; proposed to be involved in iron or copper homeostasis; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086758"}


id: PBO:0084639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mg2+-dependent phosphatidate (PA) phosphatase; dephosphorylates PA to yield diacylglycerol; regulates phospholipid synthesis, nuclear/ER membrane growth, lipid droplet formation, triacylglycerol synthesis, vacuolar homeostasis and cell wall integrity; phosphorylated by Pho85p/Pho80p, Cdc28p/Cyclin B, PKA, PKC, and CKII, regulating activity, localization, and proteosomal degradation; homolog of mammalian lipins 1 and 2; human homologs LPIN1, LPIN2, LPIN3 complement the null","termid":"PBO:0084639"}


id: GO:0033603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of dopamine.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dopamine secretion","termid":"GO:0014059"},{"relation_name":"is_a","term_name":"positive regulation of catecholamine secretion","termid":"GO:0033605"},{"relation_name":"positively_regulates","term_name":"dopamine secretion","termid":"GO:0014046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of dopamine secretion","synonyms":[{"name":"activation of dopamine secretion","type":"narrow"},{"name":"stimulation of dopamine secretion","type":"narrow"},{"name":"up regulation of dopamine secretion","type":"exact"},{"name":"up-regulation of dopamine secretion","type":"exact"},{"name":"upregulation of dopamine secretion","type":"exact"}],"termid":"GO:0033603"}


id: PBO:0080766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xin actin binding repeat containing 1","termid":"PBO:0080766"}


id: MONDO:0003742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually aggressive malignant neoplasm arising from the heart. It is characterized by the presence of spindle-shaped fibroblasts and collagenous stroma formation in a herringbone growth pattern.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart sarcoma","termid":"MONDO:0003354"},{"relation_name":"is_a","term_name":"fibrosarcoma","termid":"MONDO:0005164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005267"],"is_obsolete":false,"name":"heart fibrosarcoma","secondary_identifiers":["DOID:6033","NCIT:C5361","MEDGEN:232022","UMLS:C1332844"],"synonyms":[{"name":"Cardiac fibrosarcoma","type":"exact"},{"name":"cardiac fibrosarcoma","type":"exact"},{"name":"fibrosarcoma of heart","type":"exact"},{"name":"fibrosarcoma of the heart","type":"exact"},{"name":"heart fibrosarcoma","type":"exact"},{"name":"heart fibrosarcoma (disease)","type":"exact"}],"termid":"MONDO:0003742","xrefs":{"Monarch":{"xref_id":"0003742"}}}


id: PBO:0053611
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 645","termid":"PBO:0053611"}


id: PBO:0042211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin J pseudogene 2","termid":"PBO:0042211"}


id: PBO:0068568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 19, pseudogene","termid":"PBO:0068568"}


id: MONDO:0006721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stenosing tenosynovitis of the abductor pollicis longus and extensor pollicis brevis tendons in the first dorsal wrist compartment. The presenting symptoms are usually pain and tenderness at the radial styloid. The cause is almost always related to overuse injury or is associated with rheumatoid arthritis.","definition_xrefs":["MESH:D053684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthropathy","termid":"MONDO:0006816"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"de Quervain disease","secondary_identifiers":["EFO:1000891","DOID:14107","ICD9:727.04","MEDGEN:101771","SCTID:21794005","UMLS:C0149870"],"synonyms":[{"name":"radial styloid tenosynovitis","type":"exact"},{"name":"tenosynovitis, de Quervain's","type":"exact"}],"termid":"MONDO:0006721","xrefs":{"Monarch":{"xref_id":"0006721"}}}


id: GO:0034315
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  {"annotated_genes":["SJAG_03455"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of actin nucleation mediated by the Arp2/3 complex and interacting proteins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin nucleation","termid":"GO:0051125"},{"relation_name":"regulates","term_name":"Arp2/3 complex-mediated actin nucleation","termid":"GO:0034314"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"regulation of Arp2/3 complex-mediated actin nucleation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034315","terms_by_termid":{"GO:0034316":null}}


id: MONDO:0859331
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  {"annotated_genes":["SJAG_02873"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85077],"is_not":false,"summary":null,"term":"MONDO:0859331"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02873":null},"genotype_count":0,"is_obsolete":false,"name":"Rabin-Pappas syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620155","UMLS:C5774269","MEDGEN:1824042"],"termid":"MONDO:0859331","terms_by_termid":{"MONDO:0859331":null},"xrefs":{"Monarch":{"xref_id":"0859331"}}}


id: PBO:0071692
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 24","termid":"PBO:0071692"}


id: GO:0007228
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the activity of a transcription factor that activates transcription of Hedgehog-target genes in response to Smoothened signaling. In Drosophila, Cubitus interruptus (Ci) is the only identified transcription factor so far in the Hedgehog signaling pathway. In vertebrates, members of the Gli protein family are activated in this way. Activation of the Gli/Ci transcription factor is distinct from its stabilization, when proteolytic cleavage is inhibited.","definition_xrefs":["GOC:tb","PMID:15057936","GOC:dph","PMID:11912487"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of hh target transcription factor activity (obsolete GO:0007228)","synonyms":[{"name":"activation of hh target transcription factor","type":"exact"},{"name":"positive regulation of hedgehog target transcription factor","type":"exact"}],"termid":"GO:0007228"}


id: MONDO:0001107
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebral lipidosis (obsolete MONDO:0001107)","termid":"MONDO:0001107","xrefs":{"Monarch":{"xref_id":"0001107"}}}


id: GO:0060782
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesenchymal cell proliferation that contributes to the progression of the prostate gland over time. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets.","definition_xrefs":["GOC:dph","PMID:12221011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal cell proliferation","termid":"GO:0010464"},{"relation_name":"regulates","term_name":"mesenchymal cell proliferation involved in prostate gland development","termid":"GO:0060781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal cell proliferation involved in prostate gland development","termid":"GO:0060782"}


id: PBO:0000539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase","termid":"PBO:0000539"}


id: PBO:0039364
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anti-Mullerian hormone receptor type 2","termid":"PBO:0039364"}


id: FYPO:0000467
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the occurrence of invasive growth is increased.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased invasive growth (obsolete FYPO:0000467)","synonyms":[{"name":"invasive growth: increased","type":"related"}],"termid":"FYPO:0000467"}


id: PBO:0067875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 177","termid":"PBO:0067875"}


id: GO:0031274
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the assembly of pseudopodia.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pseudopodium assembly","termid":"GO:0031272"},{"relation_name":"is_a","term_name":"positive regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120034"},{"relation_name":"positively_regulates","term_name":"pseudopodium assembly","termid":"GO:0031269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of pseudopodium assembly","synonyms":[{"name":"activation of pseudopodium formation","type":"narrow"},{"name":"positive regulation of pseudopodium formation","type":"related"},{"name":"stimulation of pseudopodium formation","type":"narrow"},{"name":"up regulation of pseudopodium formation","type":"related"},{"name":"up-regulation of pseudopodium formation","type":"related"},{"name":"upregulation of pseudopodium formation","type":"related"}],"termid":"GO:0031274"}


id: MONDO:0007016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deficiency of vitamin A due to malnutrition, malabsorption, or dietary lack. It is manifested with reduced night vision, night blindness, and xerophthalmia.","definition_xrefs":["NCIT:C85220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin deficiency disorder","termid":"MONDO:0024298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin A deficiency","secondary_identifiers":["MESH:D014802","UMLS:C0042842","ICD9:264.9","ICD9:264.8","icd11.foundation:435342452","ICD9:264","SCTID:72000004","EFO:1001237","MEDGEN:22668","HP:0004905","MedDRA:10047586"],"synonyms":[{"name":"deficiencies, vitamin A","type":"related"},{"name":"deficiency, vitamin A","type":"related"},{"name":"vitamin A deficiencies","type":"related"},{"name":"vitamin A deficiency","type":"exact"},{"name":"vitamin A deficiency (disease)","type":"exact"}],"termid":"MONDO:0007016","xrefs":{"Monarch":{"xref_id":"0007016"}}}


id: PR:Q09722
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 3 subunit M that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00150","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit M (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1751.03","secondary_identifiers":["UniProtKB:Q09722"],"synonyms":[{"name":"Spom972h-EIF3M","type":"exact"},{"name":"eIF3m (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09722"}


id: GO:0016772
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id: GO:0002064
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an epithelial cell over time, from its formation to the mature structure. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell development","termid":"GO:0002064"}


id: GO:0060551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of fructose 1,6-bisphosphate metabolism. Fructose 1,6-bisphosphate metabolism is the chemical reactions and pathways involving fructose 1,6-bisphosphate, also known as FBP. The D enantiomer is a metabolic intermediate in glycolysis and gluconeogenesis.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"regulates","term_name":"fructose 1,6-bisphosphate metabolic process","termid":"GO:0030388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of fructose 1,6-bisphosphate metabolic process","termid":"GO:0060551"}


id: PBO:0053556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 563","termid":"PBO:0053556"}


id: PR:Q10139
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- img2 gene.","definition_xrefs":["UniProtKB:Q10139","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein img2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H8.03","synonyms":[{"name":"Spom972h-img2","type":"exact"},{"name":"integrity of mitochondrial genome protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10139"}


id: PBO:0058432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4802","termid":"PBO:0058432"}


id: PBO:0066818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 117","termid":"PBO:0066818"}


id: PR:O42910
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppr7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat-containing protein 7, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.03c","synonyms":[{"name":"Spom972h-ppr7","type":"exact"}],"termid":"PR:O42910"}


id: MONDO:0020003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare surgical cardiac disease (obsolete MONDO:0020003)","secondary_identifiers":["Orphanet:97965"],"termid":"MONDO:0020003","xrefs":{"Monarch":{"xref_id":"0020003"}}}


id: PBO:0051676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of growth family, X-linked (pseudogene)","termid":"PBO:0051676"}


id: GO:1904057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sensory perception of pain.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:17167094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nervous system process","termid":"GO:0031645"},{"relation_name":"is_a","term_name":"regulation of sensory perception of pain","termid":"GO:0051930"},{"relation_name":"negatively_regulates","term_name":"sensory perception of pain","termid":"GO:0019233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sensory perception of pain","synonyms":[{"name":"down regulation of nociception","type":"exact"},{"name":"down regulation of perception of physiological pain","type":"narrow"},{"name":"down regulation of sensory perception of pain","type":"exact"},{"name":"down-regulation of nociception","type":"exact"},{"name":"down-regulation of perception of physiological pain","type":"narrow"},{"name":"down-regulation of sensory perception of pain","type":"exact"},{"name":"downregulation of nociception","type":"exact"},{"name":"downregulation of perception of physiological pain","type":"narrow"},{"name":"downregulation of sensory perception of pain","type":"exact"},{"name":"inhibition of nociception","type":"narrow"},{"name":"inhibition of perception of physiological pain","type":"narrow"},{"name":"inhibition of sensory perception of pain","type":"narrow"},{"name":"negative regulation of nociception","type":"exact"},{"name":"negative regulation of perception of physiological pain","type":"narrow"}],"termid":"GO:1904057"}


id: FYPO:0008333
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ribosome hibernation is normal (i.e. indistinguishable from wild type) during glucose starvation.","definition_xrefs":["PMID:39379376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal ribosome hibernation during glucose starvation","termid":"FYPO:0008333"}


id: PATO:0000524
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000524 plant growth hormone sensitivity value (obsolete PATO:0000524)","termid":"PATO:0000524"}


id: PBO:0002548
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Mediator Component","termid":"PBO:0002548"}


id: PBO:0073430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3a, subunit 3 pseudogene 2","termid":"PBO:0073430"}


id: PBO:0004157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine N-acyltransferase Lac1","termid":"PBO:0004157"}


id: PBO:0034343
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-starts_with","termid":"PBO:0034343"}


id: PBO:0030661
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_Man8GlcNAc_level","termid":"PBO:0030661"}


id: PBO:0043226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLCA4 antisense RNA 1","termid":"PBO:0043226"}


id: FYPO:0001902
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cytoplasmic mRNA processing bodies (P-bodies) are smaller than normal when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small P-bodies","termid":"FYPO:0001900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"small P-bodies during glucose starvation","synonyms":[{"name":"decreased P-body formation during glucose starvation","type":"related"},{"name":"small P bodies during glucose starvation","type":"exact"},{"name":"small P-bodies during glucose depletion","type":"exact"},{"name":"small P-bodies during glucose deprivation","type":"exact"},{"name":"small P-bodies during glucose limitation","type":"related"},{"name":"small P-body during glucose starvation","type":"exact"},{"name":"small cytoplasmic mRNA processing bodies during glucose starvation","type":"exact"}],"termid":"FYPO:0001902"}


id: GO:0170027
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An outer kinetochore complex involved in the attachment of microtubule ends to the chromosomes during mitosis. In humans, it contains the subunits SKA1, SKA2 and SKA3.","definition_xrefs":["PMID:22483620","PMID:19289083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"outer kinetochore","termid":"GO:0000940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0000776"}],"interesting_parent_ids":["GO:0032991","GO:0000776","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"SKA complex","synonyms":[{"name":"SKA1 complex","type":"exact"}],"termid":"GO:0170027"}


id: PBO:0034300
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-capable_of_inhibiting_or_preventing_pathological_process","termid":"PBO:0034300"}


id: GO:0035942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of dehydroepiandrosterone (3beta-hydroxyandrost-5-en-17-one) into the circulatory system.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"hormone secretion","termid":"GO:0046879"},{"relation_name":"is_a","term_name":"lipid export from cell","termid":"GO:0140353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052","GO:0051179"],"is_obsolete":false,"name":"dehydroepiandrosterone secretion","synonyms":[{"name":"3beta-hydroxyandrost-5-en-17-one secretion","type":"exact"},{"name":"DHEA secretion","type":"exact"},{"name":"dehydroisoandrosterone secretion","type":"exact"}],"termid":"GO:0035942"}


id: PATO:0000282
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000282 f1 fertility (obsolete PATO:0000282)","termid":"PATO:0000282"}


id: PBO:0090261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane peptidase complex catalytic subunit","termid":"PBO:0090261"}


id: GO:0042682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the specification of a cell into a compound eye cone cell.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"regulates","term_name":"compound eye cone cell fate specification","termid":"GO:0042679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of compound eye cone cell fate specification","secondary_identifiers":["GO:0042681"],"termid":"GO:0042682"}


id: GO:0071626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of biting and mashing food with the teeth prior to swallowing.","definition_xrefs":["GOC:gvg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system process","termid":"GO:0022600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mastication","synonyms":[{"name":"chewing","type":"exact"}],"termid":"GO:0071626"}


id: PBO:0083898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG-nucleoporin component of central core of the nuclear pore complex; contributes directly to nucleocytoplasmic transport and maintenance of thenuclear pore complex (NPC) permeability barrier; possible karyopherin release factor that accelerates release of karyopherin-cargo complexes after transport across NPC; both NUP1 and NUP60 are homologous to human NUP153","termid":"PBO:0083898"}


id: PBO:0084556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the SWI/SNF chromatin remodeling complex; has an as yet unidentified role in the complex; has identifiable counterparts in closely related yeast species; abundantly expressed in many growth conditions; paralog of Npl6p; relocates to the cytosol under hypoxic conditions","termid":"PBO:0084556"}


id: PBO:0064125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin family receptor for egg jelly","termid":"PBO:0064125"}


id: PBO:0070963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18 pseudogene 1","termid":"PBO:0070963"}


id: FYPO:0007719
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which SMN complex assembly is abolished.","definition_xrefs":["PMID:33754639","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal SMN complex assembly","termid":"FYPO:0007718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished SMN complex assembly","synonyms":[{"name":"SMN complex assembly abolished","type":"exact"},{"name":"abolished SMN complex assembly during mitotic cell cycle","type":"related"},{"name":"abolished SMN complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0007719"}


id: SO:0002132
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A long non-coding transcript that contains a protein coding gene within its intronic sequence on the same strand, with no overlap of exonic sequence.","definition_xrefs":["GENECODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lncRNA","termid":"SO:0001877"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sense_overlap_lncRNA","synonyms":[{"name":"sense overlap lncRNA","type":"exact"},{"name":"sense_overlap_lncRNA","type":"exact"},{"name":"sense_overlapping","type":"exact"}],"termid":"SO:0002132"}


id: PBO:0083434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YKR041W","termid":"PBO:0083434"}


id: FYPO:0003604
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","gene_count":0,"genotype_count":0,"name":"obsolete sister chromatid separation during meiosis I (obsolete FYPO:0003604)","termid":"FYPO:0003604"}


id: GO:0016192
data:
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id: GO:1901417
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to ethanol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to ethanol","termid":"GO:1901416"},{"relation_name":"is_a","term_name":"negative regulation of response to alcohol","termid":"GO:1901420"},{"relation_name":"negatively_regulates","term_name":"response to ethanol","termid":"GO:0045471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to ethanol","synonyms":[{"name":"down regulation of response to ethanol","type":"exact"},{"name":"down-regulation of response to ethanol","type":"exact"},{"name":"downregulation of response to ethanol","type":"exact"},{"name":"inhibition of response to ethanol","type":"narrow"}],"termid":"GO:1901417"}


id: MONDO:1011512
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glaucoma that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glaucoma, non-human animal","termid":"MONDO:1011457"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glaucoma, horse","secondary_identifiers":["OMIA:000411-9796"],"termid":"MONDO:1011512","xrefs":{"Monarch":{"xref_id":"1011512"}}}


id: FYPO:0003173
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleotide-excision repair is abnormal. Nucleotide-excision repair is a DNA repair process in which a small region of the strand surrounding the damage is removed as an oligonucleotide, and the resulting small gap is filled in by the sequential action of DNA polymerase and DNA ligase.","definition_xrefs":["PomBase:mah","GO:0006289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA repair during vegetative growth","termid":"FYPO:0000188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000293","FYPO:0000298","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal nucleotide-excision repair during vegetative growth","synonyms":[{"name":"abnormal NER during vegetative growth","type":"exact"},{"name":"abnormal excision repair during vegetative growth","type":"broad"},{"name":"abnormal nucleotide-excision repair during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003173"}


id: _global:activated_by
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  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activated_by","secondary_identifiers":["GOREL:0000507"],"synonyms":[{"name":"activated by","type":"exact"},{"name":"activated_by_chemical","type":"exact"},{"name":"activated_by_substance","type":"exact"},{"name":"activity_increased_by","type":"exact"}],"termid":"_global:activated_by"}


id: GO:0044653
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dextrin + H2O = alpha-D-glucose.","definition_xrefs":["PMID:18556189"],"gene_count":0,"genotype_count":0,"name":"obsolete dextrin alpha-glucosidase activity (obsolete GO:0044653)","termid":"GO:0044653"}


id: PBO:0079020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-undetermined (NNN) 3-1","termid":"PBO:0079020"}


id: PATO:0000205
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  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000205 relative locomotor_activity (obsolete PATO:0000205)","termid":"PATO:0000205"}


id: PBO:0070011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1308, pseudogene","termid":"PBO:0070011"}


id: GO:0016034
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-maleylacetoacetate = 4-fumarylacetoacetate.","definition_xrefs":["EC:5.2.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-trans isomerase activity","termid":"GO:0016859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"maleylacetoacetate isomerase activity","secondary_identifiers":["GO:0018841","Reactome:R-HSA-71173","RHEA:14817","MetaCyc:MALEYLACETOACETATE-ISOMERASE-RXN","UM-BBD_reactionID:r0106"],"synonyms":[{"name":"4-maleylacetoacetate cis-trans-isomerase activity","type":"related"},{"name":"maleylacetoacetic isomerase activity","type":"related"},{"name":"maleylacetone cis-trans-isomerase activity","type":"related"},{"name":"maleylacetone isomerase activity","type":"related"}],"termid":"GO:0016034"}


id: MONDO:0008340
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital ptosis is characterized by superior eyelid drop present at birth.","definition_xrefs":["Orphanet:91411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ptosis","termid":"MONDO:0000728"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ptosis, hereditary congenital, 1","secondary_identifiers":["UMLS:C1867438","SCTID:268163008","HP:0007970","NCIT:C27049","DOID:0060261","GARD:16798","ICD9:743.61","MESH:C566737","MedDRA:10015996","OMIM:178300","MEDGEN:357987"],"synonyms":[{"name":"PTOS1","type":"related"},{"name":"congenital eyelid ptosis","type":"exact"},{"name":"congenital ptosis","type":"exact"},{"name":"congenital ptosis (disease)","type":"exact"},{"name":"ptosis, congenital","type":"exact"},{"name":"ptosis, hereditary congenital 1","type":"related"},{"name":"ptosis, hereditary congenital, 1","type":"exact"}],"termid":"MONDO:0008340","xrefs":{"Monarch":{"xref_id":"0008340"}}}


id: PR:O59737
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gyp1 gene.","definition_xrefs":["UniProtKB:O59737","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein gyp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.01","synonyms":[{"name":"GAP for ypt1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gyp1","type":"exact"}],"termid":"PR:O59737"}


id: PBO:0085676
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in pre-mRNA splicing; component of the pre-spliceosome; associates with U2 snRNA; involved in ER to Golgi transport","termid":"PBO:0085676"}


id: PBO:0081405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF252P antisense RNA 1","termid":"PBO:0081405"}


id: PATO:0001219
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001219 area_unit (obsolete PATO:0001219)","termid":"PATO:0001219"}


id: PATO:0002503
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  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed posterolaterally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterolateral orientation","synonyms":[{"name":"posterolaterally directed","type":"exact"}],"termid":"PATO:0002503"}


id: MONDO:0020804
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma involving the basal cells.","definition_xrefs":["NCIT:C156767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"},{"relation_name":"is_a","term_name":"basal cell neoplasm","termid":"MONDO:0020799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"basal cell carcinoma","secondary_identifiers":["EFO:0004193","MEDGEN:2870","MESH:D002280","NCIT:C7586","UMLS:C0007117"],"synonyms":[{"name":"basal cell cancer","type":"exact"},{"name":"epithelioma, basal cell","type":"exact"},{"name":"malignant basal cell neoplasm","type":"exact"}],"termid":"MONDO:0020804","xrefs":{"Monarch":{"xref_id":"0020804"}}}


id: GO:0007224
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened.","definition_xrefs":["GOC:mah","PMID:15057936","PMID:15205520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"smoothened signaling pathway","secondary_identifiers":["Wikipedia:Hedgehog_signaling_pathway"],"synonyms":[{"name":"Shh signaling pathway","type":"related"},{"name":"Sonic hedgehog signaling pathway","type":"narrow"},{"name":"hedgehog signaling pathway","type":"exact"},{"name":"hh signaling pathway","type":"narrow"},{"name":"hh signalling pathway","type":"narrow"},{"name":"smoothened signalling pathway","type":"exact"}],"termid":"GO:0007224"}


id: PBO:0013444
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCAD1 family ATP-dependent DNA helicase Fft3","termid":"PBO:0013444"}


id: PBO:0039977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 5A","termid":"PBO:0039977"}


id: GO:0050915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required to receive a sour taste stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of taste","termid":"GO:0050909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of sour taste","synonyms":[{"name":"sour taste perception","type":"exact"}],"termid":"GO:0050915"}


id: PATO:0002088
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  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structure quality inhering in a bearer by virtue of the bearer's body consisting of one sac.","definition_xrefs":["mondofacto:mondofacto"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystic","termid":"PATO:0001673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monocystic","termid":"PATO:0002088"}


id: MONDO:0013127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An asphyxiating thoracic dystrophy that has material basis in homozygous or compound heterozygous mutation in the DYNC2H1 gene on chromosome 11q22.","definition_xrefs":["PMID:19442771","DOID:0110087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Jeune syndrome","termid":"MONDO:0018770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"asphyxiating thoracic dystrophy 3","secondary_identifiers":["ICD9:759.89","OMIM:613091","DOID:0050549","MEDGEN:19860","SCTID:254051008","GARD:15613","NCIT:C163755","Orphanet:93270","MESH:C537602","Orphanet:93271","SCTID:27330009","UMLS:C0036069"],"synonyms":[{"name":"ATD3","type":"exact"},{"name":"SRPS type 1","type":"exact"},{"name":"SRPS type 3","type":"exact"},{"name":"SRPS1","type":"exact"},{"name":"SRPS2B","type":"exact"},{"name":"SRPS3","type":"exact"},{"name":"SRTD3","type":"exact"},{"name":"Saldino-Noonan syndrome","type":"exact"},{"name":"Verma-Naumoff syndrome","type":"exact"},{"name":"asphyxiating thoracic dystrophy 3","type":"exact"},{"name":"asphyxiating thoracic dystrophy type 3","type":"exact"},{"name":"polydactyly with neonatal chondrodystrophy type 1","type":"exact"},{"name":"polydactyly with neonatal chondrodystrophy type III","type":"exact"},{"name":"polydactyly with neonatal chondrodystrophy, type 3","type":"exact"},{"name":"polydactyly with neonatal chondrodystrophy, type I","type":"exact"},{"name":"short rib polydactyly syndrome Verma Naumoff type","type":"exact"},{"name":"short rib-polydactyly syndrome Saldino-Noonan type","type":"exact"},{"name":"short rib-polydactyly syndrome type 1","type":"exact"},{"name":"short rib-polydactyly syndrome type 3","type":"exact"},{"name":"short rib-polydactyly syndrome type III","type":"exact"},{"name":"short rib-polydactyly syndrome, type 2B","type":"exact"},{"name":"short rib-polydactyly syndrome, type IIB","type":"exact"},{"name":"short-rib thoracic dysplasia 3 with or without polydactyly","type":"exact"},{"name":"type I short rib polydactyly syndrome","type":"exact"}],"termid":"MONDO:0013127","xrefs":{"Monarch":{"xref_id":"0013127"}}}


id: PBO:0059131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-phase phosphoprotein 8","termid":"PBO:0059131"}


id: MONDO:1011416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Calcinosis circumscripta that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcinosis circumscripta, non-human animal","secondary_identifiers":["OMIA:000158"],"termid":"MONDO:1011416","xrefs":{"Monarch":{"xref_id":"1011416"}}}


id: FYPO:0000948
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is shaped in the form of a sphere, and has a normal volume.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"spherical vegetative cell","termid":"FYPO:0000129"},{"relation_name":"is_a","term_name":"spherical vegetative cell","termid":"FYPO:0000129"},{"relation_name":"is_a","term_name":"normal volume spheroid vegetative cell","termid":"FYPO:0000946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000257","FYPO:0001985","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal volume spherical vegetative cell","synonyms":[{"name":"normal volume orb during vegetative growth","type":"exact"},{"name":"normal volume spherical cell during vegetative growth","type":"exact"},{"name":"normal volume spherical vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000948"}


id: GO:0046357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of galactarate, the anion of galactaric acid.","definition_xrefs":["GOC:pr","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldaric acid biosynthetic process","termid":"GO:0019578"},{"relation_name":"is_a","term_name":"galactarate metabolic process","termid":"GO:0019580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"galactarate biosynthetic process","secondary_identifiers":["GO:0042872"],"synonyms":[{"name":"D-galactarate anabolism","type":"related"},{"name":"D-galactarate biosynthesis","type":"related"},{"name":"D-galactarate biosynthetic process","type":"related"},{"name":"D-galactarate formation","type":"related"},{"name":"D-galactarate synthesis","type":"related"},{"name":"galactarate anabolism","type":"exact"},{"name":"galactarate biosynthesis","type":"exact"},{"name":"galactarate formation","type":"exact"},{"name":"galactarate synthesis","type":"exact"}],"termid":"GO:0046357"}


id: FYPO:0006615
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118794,118795],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0006616"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell has a greater diameter (thickness; width) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"},{"relation_name":"is_a","term_name":"abnormal cell size","termid":"FYPO:0001127"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_04522":null},"genotype_count":2,"genotypes_by_uniquename":{"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga6delta":{"display_name":"rga6delta","display_uniquename":"rga6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"increased cell diameter","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_00028","SJAG_04522"],"single_locus_genotype_uniquenames":["rga4delta","rga6delta"],"synonyms":[{"name":"increased cell thickness","type":"exact"},{"name":"increased cell width","type":"exact"}],"termid":"FYPO:0006615","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0006616":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0072453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 17","termid":"PBO:0072453"}


id: PBO:0055394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2824","termid":"PBO:0055394"}


id: PBO:0083672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum zinc transporter; part of a heterodimeric transporter with Msc2p that transfers zinc from the cytosol to the ER lumen; member of the cation diffusion facilitator family of efflux pumps; zinc-regulated directly through Zap1p; transcription induced under conditions of zinc deficiency","termid":"PBO:0083672"}


id: GO:1901875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of post-translational protein modification.","definition_xrefs":["GOC:TermGenie","PMID:21209915","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"is_a","term_name":"regulation of post-translational protein modification","termid":"GO:1901873"},{"relation_name":"positively_regulates","term_name":"post-translational protein modification","termid":"GO:0043687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of post-translational protein modification","synonyms":[{"name":"activation of PTM","type":"exact"},{"name":"activation of post-translational amino acid modification","type":"exact"},{"name":"activation of post-translational modification","type":"exact"},{"name":"activation of post-translational protein modification","type":"narrow"},{"name":"activation of posttranslational amino acid modification","type":"exact"},{"name":"activation of posttranslational modification","type":"exact"},{"name":"activation of posttranslational protein modification","type":"exact"},{"name":"positive regulation of PTM","type":"exact"},{"name":"positive regulation of post-translational amino acid modification","type":"exact"},{"name":"positive regulation of post-translational modification","type":"exact"},{"name":"positive regulation of posttranslational amino acid modification","type":"exact"},{"name":"positive regulation of posttranslational modification","type":"exact"},{"name":"positive regulation of posttranslational protein modification","type":"exact"},{"name":"up regulation of PTM","type":"exact"},{"name":"up regulation of post-translational amino acid modification","type":"exact"},{"name":"up regulation of post-translational modification","type":"exact"},{"name":"up regulation of post-translational protein modification","type":"exact"},{"name":"up regulation of posttranslational amino acid modification","type":"exact"},{"name":"up regulation of posttranslational modification","type":"exact"},{"name":"up regulation of posttranslational protein modification","type":"exact"},{"name":"up-regulation of PTM","type":"exact"},{"name":"up-regulation of post-translational amino acid modification","type":"exact"},{"name":"up-regulation of post-translational modification","type":"exact"},{"name":"up-regulation of post-translational protein modification","type":"exact"},{"name":"up-regulation of posttranslational amino acid modification","type":"exact"},{"name":"up-regulation of posttranslational modification","type":"exact"},{"name":"up-regulation of posttranslational protein modification","type":"exact"},{"name":"upregulation of PTM","type":"exact"},{"name":"upregulation of post-translational amino acid modification","type":"exact"},{"name":"upregulation of post-translational modification","type":"exact"},{"name":"upregulation of post-translational protein modification","type":"exact"},{"name":"upregulation of posttranslational amino acid modification","type":"exact"},{"name":"upregulation of posttranslational modification","type":"exact"},{"name":"upregulation of posttranslational protein modification","type":"exact"}],"termid":"GO:1901875"}


id: PBO:0113167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral ER membrane protein with type-III transmembrane domains; promotes ER membrane expansion by inhibiting the Nem1-Spo7 phosphatase complex, resulting in reduced dephosphorylation and activation of Pah1p; maintains homeostasis during ER stress; required for post-translational SRP-independent protein translocation into the ER; necessary for efficient targeting of the Trm1p to the inner nuclear membrane; mutations cause defects in cortical ER morphology; member of the SERINC superfamily","termid":"PBO:0113167"}


id: GO:0102033
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an omega-methyl-long-chain fatty acid + O2 + reduced [NADPH--hemoprotein reductase] = an omega-hydroxy-long-chain fatty acid + H+ + H2O + oxidized [NADPH--hemoprotein reductase]. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["GOC:krc","PMID:18544608","RHEA:56748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid omega-hydroxylase activity","termid":"GO:0120250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"long-chain fatty acid omega-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-16394","EC:1.14.14.80"],"synonyms":[{"name":"cytochrome P450 fatty acid omega-hydroxylase activity","type":"related"}],"termid":"GO:0102033"}


id: PBO:0043650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPS8 divergent transcript","termid":"PBO:0043650"}


id: PBO:0055542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2978","termid":"PBO:0055542"}


id: MONDO:0009254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fucosidosis is an extremely rare lysosomal storage disorder characterized by a highly variable phenotype with common manifestations including neurologic deterioration, coarse facial features, growth retardation, and recurrent sinopulmonary infections, as well as seizures, visceromegaly, angiokeratoma and dysostosis.","definition_xrefs":["Orphanet:349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharidosis","termid":"MONDO:0019251"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"fucosidosis","secondary_identifiers":["MESH:D005645","NCIT:C61274","OMIM:230000","icd11.foundation:1470242510","SCTID:64716005","ICD9:271.8","UMLS:C0016788","GARD:6473","NANDO:1200130","DOID:14500","MEDGEN:5288","NANDO:2200553","NORD:1168"],"synonyms":[{"name":"A-fucosidase deficiency","type":"exact"},{"name":"Alpha-L-fucosidase deficiency","type":"exact"},{"name":"alpha fucosidase deficiency","type":"exact"},{"name":"fucosidosis","type":"exact"},{"name":"lysosomal storage disease caused by defective alpha-L-fucosidase with accumulation of fucose in the tissues","type":"related"}],"termid":"MONDO:0009254","xrefs":{"Monarch":{"xref_id":"0009254"}}}


id: GO:0047426
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + ricinine = NH3 + 3-carboxy-4-methoxy-N-methyl-2-pyridone.","definition_xrefs":["EC:3.5.5.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrilase activity","termid":"GO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"ricinine nitrilase activity","secondary_identifiers":["RHEA:22704","MetaCyc:3.5.5.2-RXN"],"synonyms":[{"name":"ricinine aminohydrolase activity","type":"related"}],"termid":"GO:0047426"}


id: MONDO:0004545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant peripheral nerve sheath tumor occurring during adulthood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant peripheral nerve sheath tumor","termid":"MONDO:0017827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult malignant schwannoma","secondary_identifiers":["UMLS:C0278622","NCIT:C7814","DOID:8369","MEDGEN:75845"],"synonyms":[{"name":"adult MPNST","type":"exact"},{"name":"adult malignant neoplasm of peripheral nerve sheath","type":"exact"},{"name":"adult malignant neoplasm of the peripheral nerve sheath","type":"exact"},{"name":"adult malignant neurilemmoma","type":"exact"},{"name":"adult malignant peripheral nerve sheath neoplasm","type":"exact"},{"name":"adult malignant peripheral nerve sheath tumor","type":"exact"},{"name":"adult malignant peripheral nerve sheath tumour","type":"exact"},{"name":"adult malignant schwannoma","type":"exact"},{"name":"adult malignant tumor of peripheral nerve sheath","type":"exact"},{"name":"adult malignant tumor of the peripheral nerve sheath","type":"exact"},{"name":"adult malignant tumour of peripheral nerve sheath","type":"exact"},{"name":"adult malignant tumour of the peripheral nerve sheath","type":"exact"},{"name":"malignant peripheral nerve sheath tumor","type":"broad"},{"name":"malignant peripheral nerve sheath tumour","type":"broad"}],"termid":"MONDO:0004545","xrefs":{"Monarch":{"xref_id":"0004545"}}}


id: PBO:0013114
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisie STM1","termid":"PBO:0013114"}


id: PBO:0079261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTC32 divergent transcript","termid":"PBO:0079261"}


id: PBO:0057023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 124-1","termid":"PBO:0057023"}


id: MONDO:0100462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic skeletal disorder characterized clinically by abnormal chondro-skeletal development, disproportionate short stature and skeletal deformation mainly affecting the knees, hips, ankles and elbows with onset generally in late childhood or adolescence.","definition_xrefs":["Orphanet:251262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteonecrosis of genetic origin","termid":"MONDO:0018383"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature and advanced bone age, with or without early-onset osteoarthritis and/or osteochondritis dissecans","secondary_identifiers":["UMLS:C3665488","GARD:4133","MEDGEN:777109","OMIM:165800"],"synonyms":[{"name":"OD","type":"exact"},{"name":"SSOAOD","type":"exact"},{"name":"osteochondritis dissecans and short stature","type":"exact"},{"name":"osteochondritis dissecans, short stature, and early-onset osteoarthritis","type":"exact"}],"termid":"MONDO:0100462","xrefs":{"Monarch":{"xref_id":"0100462"}}}


id: MONDO:0005529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete methylmalonic aciduria and homocystinuria type cblG (obsolete MONDO:0005529)","termid":"MONDO:0005529","xrefs":{"Monarch":{"xref_id":"0005529"}}}


id: PBO:0091538
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by human TPM1 skeletal muscle isoform","termid":"PBO:0091538"}


id: PBO:0046925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 43 member A","termid":"PBO:0046925"}


id: PBO:0051174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-63 (pseudogene)","termid":"PBO:0051174"}


id: GO:0005986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sucrose, the disaccharide fructofuranosyl-glucopyranoside.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sucrose metabolic process","termid":"GO:0005985"},{"relation_name":"is_a","term_name":"disaccharide biosynthetic process","termid":"GO:0046351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"sucrose biosynthetic process","secondary_identifiers":["MetaCyc:SUCSYN-PWY"],"synonyms":[{"name":"sucrose anabolism","type":"exact"},{"name":"sucrose biosynthesis","type":"exact"},{"name":"sucrose formation","type":"exact"},{"name":"sucrose synthesis","type":"exact"}],"termid":"GO:0005986"}


id: PBO:0072846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor APC domain containing 2 pseudogene 1","termid":"PBO:0072846"}


id: PATO:0000967
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having a sinuate margin and rippled surface.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"undulate","secondary_identifiers":["PATO:0001610","PATO:0001939"],"synonyms":[{"name":"rippled","type":"related"},{"name":"sinuate","type":"related"},{"name":"undulated","type":"exact"},{"name":"undulating","type":"exact"},{"name":"waved","type":"exact"},{"name":"wavy","type":"exact"}],"termid":"PATO:0000967"}


id: PBO:0054173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1546","termid":"PBO:0054173"}


id: GO:0032414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of an ion transporter.","definition_xrefs":["GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transporter activity","termid":"GO:0032411"},{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"positive regulation of monoatomic ion transmembrane transport","termid":"GO:0034767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of ion transmembrane transporter activity","synonyms":[{"name":"activation of ion transporter activity","type":"narrow"},{"name":"positive regulation of ion transporter activity","type":"exact"},{"name":"stimulation of ion transporter activity","type":"narrow"},{"name":"up regulation of ion transporter activity","type":"exact"},{"name":"up-regulation of ion transporter activity","type":"exact"},{"name":"upregulation of ion transporter activity","type":"exact"}],"termid":"GO:0032414"}


id: MONDO:0019789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cytophagic histiocytic panniculitis (CHP) is a very rare form of panniculitis manifesting as recurrent multiple subcutaneous nodules (which may progressively become ecchymotic and ulcerated), and histologically characterized by lobular panniculitis with lymphocytic and histiocytic infiltration in the subcutaneous adipose tissue.","definition_xrefs":["Orphanet:94087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"panniculitis","termid":"MONDO:0006591"},{"relation_name":"is_a","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytophagic histiocytic panniculitis","secondary_identifiers":["icd11.foundation:1978274002","MEDGEN:590528","GARD:19249","UMLS:C0406594","SCTID:238883003"],"synonyms":[{"name":"CHP","type":"exact"},{"name":"Winkelmann cytophagic panniculitis","type":"exact"}],"termid":"MONDO:0019789","xrefs":{"Monarch":{"xref_id":"0019789"}}}


id: GO:0048722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anterior cibarial plate over time, from their formation to the mature structure.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"clypeo-labral disc development","termid":"GO:0035213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior cibarial plate development","termid":"GO:0048722"}


id: PBO:0044509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytohesin 1 interacting protein","termid":"PBO:0044509"}


id: GO:0032917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of polyamines by addition of acetyl groups.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine metabolic process","termid":"GO:0006595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polyamine acetylation","termid":"GO:0032917"}


id: PBO:0014587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethanol-dependent mutant protein Etd1","termid":"PBO:0014587"}


id: PBO:0003530
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human BIN3","termid":"PBO:0003530"}


id: MONDO:0022795
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"deficiency of coenzyme q cytochrome c reductase","secondary_identifiers":["GARD:1419"],"synonyms":[{"name":"coenzyme Q cytochrome c reductase deficiency of","type":"related"}],"termid":"MONDO:0022795","xrefs":{"Monarch":{"xref_id":"0022795"}}}


id: MONDO:0016999
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete X chromosome number anomaly (obsolete MONDO:0016999)","secondary_identifiers":["Orphanet:263714"],"termid":"MONDO:0016999","xrefs":{"Monarch":{"xref_id":"0016999"}}}


id: MONDO:0001692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by recurrent sexual urges, fantasies, or behaviors involving sexual activity with a prepubescent child or children.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paraphilic disorder","termid":"MONDO:0000596"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pedophilia","secondary_identifiers":["UMLS:C0030764","SCTID:84002002","MESH:D010378","NCIT:C94355","DOID:13351","ICD9:302.2","ICD10CM:F65.4","MEDGEN:18340"],"synonyms":[{"name":"Paedophilia","type":"exact"}],"termid":"MONDO:0001692","xrefs":{"Monarch":{"xref_id":"0001692"}}}


id: PBO:0048934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi transport 1A","termid":"PBO:0048934"}


id: PATO:0002323
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A temporal distribution pattern of process occurrences within a regulation/reference process.","definition_xrefs":["PATOC:LC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality of a process","termid":"PATO:0002062"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temporal distribution quality","termid":"PATO:0002323"}


id: GO:0010307
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of acetylglutamate kinase.","definition_xrefs":["PMID:16377628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase regulator activity","termid":"GO:0019207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"acetylglutamate kinase regulator activity","termid":"GO:0010307"}


id: PBO:0054744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2153","termid":"PBO:0054744"}


id: PBO:0084866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; genetic interactions suggest a possible role in promoting translation initiation","termid":"PBO:0084866"}


id: PBO:0028272
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_malate_dehydrogenase_(decarboxylating)_(NAD+)_activity","termid":"PBO:0028272"}


id: FYPO:0001907
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize thiamine, and therefore requires thiamine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for thiamine","synonyms":[{"name":"growth auxotrophic for thiamin","type":"exact"},{"name":"growth auxotrophic for thiamine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for thiamine during vegetative growth","type":"exact"},{"name":"growth auxotrophic for vitamin B1","type":"exact"},{"name":"thiamine auxotrophy","type":"exact"}],"termid":"FYPO:0001907"}


id: PBO:0004688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein N-terminal amidase Nta1 (predicted)","termid":"PBO:0004688"}


id: MONDO:1011563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuroaxonal dystrophy that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroaxonal dystrophy, non-human animal","termid":"MONDO:1011444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroaxonal dystrophy, horse","secondary_identifiers":["OMIA:000715-9796"],"termid":"MONDO:1011563","xrefs":{"Monarch":{"xref_id":"1011563"}}}


id: GO:1902049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of neosartoricin.","definition_xrefs":["GOC:di","GOC:TermGenie","PMID:23368997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"neosartoricin metabolic process","termid":"GO:1902048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"neosartoricin catabolic process","synonyms":[{"name":"neosartoricin breakdown","type":"exact"},{"name":"neosartoricin catabolism","type":"exact"},{"name":"neosartoricin degradation","type":"exact"}],"termid":"GO:1902049"}


id: PBO:0086514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; large-scale analyses show mRNA expression increases under anaerobic conditions and two-hybrid interactions with Sst2p","termid":"PBO:0086514"}


id: PBO:0038835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS7 pseudogene 1","termid":"PBO:0038835"}


id: PBO:0018182
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae HMG1","termid":"PBO:0018182"}


id: PBO:0071032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 34","termid":"PBO:0071032"}


id: PBO:0008726
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previusly annotated as SPBTRNAASP.03","termid":"PBO:0008726"}


id: MONDO:0044270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bilirubin, serum level of, quantitative trait locus 1 (obsolete MONDO:0044270)","secondary_identifiers":["OMIM:601816"],"synonyms":[{"name":"BILIQTL1","type":"related"},{"name":"bilirubin, serum level OF, quantitative trait locus 1","type":"related"},{"name":"bilirubin, serum level of, QTL1","type":"exact"}],"termid":"MONDO:0044270","xrefs":{"Monarch":{"xref_id":"0044270"}}}


id: PBO:0081882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 830","termid":"PBO:0081882"}


id: PBO:0025453
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast cancer","termid":"PBO:0025453"}


id: PBO:0044924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol kinase alpha","termid":"PBO:0044924"}


id: GO:0021684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the cerebellar granule layer. This process pertains to the initial formation of a structure from unspecified parts. The granular layer is the innermost layer of the cerebellar cortex. This layer contains densely packed small neurons, mostly granule cells. Some Golgi cells are found at the outer border. Granule neurons send parallel fibers to the upper molecular layer, where they synapse with Purkinje cell dendrites. Mossy fibers from the pontine nuclei in the white matter synapse with granule cell axons, Golgi cell axons and unipolar brush interneuron axons at cerebellar glomeruli in the granule cell layer.","definition_xrefs":["ISBN:0838580343","GOC:jid","GO_REF:0000021","GOC:cls","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"cerebellar granular layer morphogenesis","termid":"GO:0021683"},{"relation_name":"part_of","term_name":"cerebellar cortex formation","termid":"GO:0021697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar granular layer formation","termid":"GO:0021684"}


id: PBO:0043284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 4 member G pseudogene 1","termid":"PBO:0043284"}


id: PBO:0060789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDUFC2-KCTD14 readthrough","termid":"PBO:0060789"}


id: GO:0061666
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of UFM1 to a substrate protein via the reaction X-UFM1 + S = X + S-UFM1, where X is either an E2 or E3 enzyme, the X-UFM1 linkage is a thioester bond, and the S-UFM1 linkage is an isopeptide bond between the C-terminal amino acid of UFM1 and the epsilon-amino group of lysine residues in the substrate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein ligase activity","termid":"GO:0061659"},{"relation_name":"is_a","term_name":"UFM1 transferase activity","termid":"GO:0071568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0140096","GO:0016740","GO:0003674","GO:0019787"],"is_obsolete":false,"name":"UFM1 ligase activity","synonyms":[{"name":"E3","type":"broad"}],"termid":"GO:0061666"}


id: PBO:0052730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 22","termid":"PBO:0052730"}


id: GO:0071154
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed by the association of the guanine nucleotide exchange factor synembrin with the alpha(i)1 subunit of a heterotrimeric G protein.","definition_xrefs":["PMID:12509430","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"G-protein alpha(i)1-synembrin complex","synonyms":[{"name":"Ric-8A G(i) alpha-1 subunit complex","type":"narrow"},{"name":"Ric-8A G(i) alpha-2 subunit complex","type":"related"}],"termid":"GO:0071154"}


id: PBO:0052565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase 2C pseudogene 2","termid":"PBO:0052565"}


id: PBO:0036301
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative transcripts, alternative splicing","termid":"PBO:0036301"}


id: PBO:0064288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasminogen","termid":"PBO:0064288"}


id: PBO:0051055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 2/OR15-2B (non-functional)","termid":"PBO:0051055"}


id: PR:Q10066
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- aru1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginase Aru1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.07","synonyms":[{"name":"SPAC3H1.07","type":"related"},{"name":"Spom972h-aru1","type":"exact"}],"termid":"PR:Q10066"}


id: FYPO:0009097
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing xylose as the carbon source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0001985","FYPO:0000003","FYPO:0002060","FYPO:0005447","FYPO:0002057","FYPO:0000139"],"is_obsolete":false,"name":"decreased cell population growth on xylose carbon source","synonyms":[{"name":"decreased growth on xylose carbon source","type":"broad"},{"name":"decreased vegetative cell growth on xylose carbon source","type":"exact"},{"name":"reduced cell growth on xylose carbon source","type":"related"},{"name":"slow cell growth on xylose carbon source","type":"narrow"}],"termid":"FYPO:0009097"}


id: GO:1902890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of root hair elongation.","definition_xrefs":["GOC:als","GOC:TermGenie","GO_REF:0000058","PMID:22329353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell growth","termid":"GO:0001558"},{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"root hair elongation","termid":"GO:0048767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of root hair elongation","termid":"GO:1902890"}


id: FYPO:0004341
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial fission, the division of a mitochondrion into two or more separate compartments, begins later than normal during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah","PMID:22139357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial fission","termid":"FYPO:0004340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of mitochondrial fission during cellular response to hydrogen peroxide","synonyms":[{"name":"delayed mitochondrial fission during cellular response to hydrogen peroxide","type":"exact"},{"name":"delayed onset of mitochondrial division","type":"exact"},{"name":"delayed onset of mitochondrial fission during cellular response to H2O2","type":"exact"},{"name":"delayed onset of mitochondrial fission during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"delayed onset of mitochondrial fission during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"delayed onset of mitochondrial fission during mitotic cell cycle","type":"related"},{"name":"delayed onset of mitochondrial fission during vegetative growth","type":"exact"},{"name":"delayed onset of mitochondrial proliferation","type":"related"}],"termid":"FYPO:0004341"}


id: PR:Q9UTM7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone acetyltransferase type B catalytic subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12046:SF0","OMA:SCHPO00406","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase type B catalytic subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC139.06","secondary_identifiers":["UniProtKB:Q9UTM7"],"synonyms":[{"name":"Spom972h-HAT1","type":"exact"}],"termid":"PR:Q9UTM7"}


id: MONDO:0015037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lissencephaly with cerebellar hypoplasia type D (LCHd) is a form of lissencephaly with cerebellar hypoplasia characterized by pronounced microcephaly (at least B1 3 SD), intellectual disability, spastic diplegia and moderate to severe cerebellar hypoplasia involving both vermis and hemispheres.","definition_xrefs":["Orphanet:100014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly with cerebellar hypoplasia","termid":"MONDO:0019450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly with cerebellar hypoplasia type D","secondary_identifiers":["MEDGEN:895252","GARD:19734","UMLS:C4274991","icd11.foundation:1633599738","SCTID:715821000"],"termid":"MONDO:0015037","xrefs":{"Monarch":{"xref_id":"0015037"}}}


id: GO:0019750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a chloroplast is transported to, and/or maintained in, a specific location within the cell. A chloroplast is a chlorophyll-containing plastid found in cells of algae and higher plants.","definition_xrefs":["ISBN:0198506732","GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid localization","termid":"GO:0051644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"chloroplast localization","synonyms":[{"name":"chloroplast localisation","type":"exact"}],"termid":"GO:0019750"}


id: PBO:0027784
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_threonine_phosphorylation","termid":"PBO:0027784"}


id: MONDO:0008985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia with transposition of ciliary microtubules","secondary_identifiers":["MEDGEN:388736","MESH:C567137","UMLS:C2673817","GARD:1361","OMIM:215520"],"synonyms":[{"name":"ciliary dyskinesia with transposition of ciliary microtubules","type":"exact"},{"name":"ciliary dyskinesia, due to transposition of ciliary microtubules","type":"related"}],"termid":"MONDO:0008985","xrefs":{"Monarch":{"xref_id":"0008985"}}}


id: MONDO:0020524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary parathyroid hyperplasia (obsolete MONDO:0020524)","secondary_identifiers":["Orphanet:99878"],"synonyms":[{"name":"familial parathyroids hyperplasia","type":"exact"},{"name":"hereditary parathyroids hyperplasia","type":"related"}],"termid":"MONDO:0020524","xrefs":{"Monarch":{"xref_id":"0020524"}}}


id: MONDO:0003498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gallbladder squamous cell carcinoma (obsolete MONDO:0003498)","termid":"MONDO:0003498","xrefs":{"Monarch":{"xref_id":"0003498"}}}


id: PBO:0086762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; S288C contains an in-frame stop codon between ORFs YLR030W and YLR031W","termid":"PBO:0086762"}


id: MONDO:0012575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any branchio-oto-renal syndrome in which the cause of the disease is a mutation in the SIX5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branchio-oto-renal syndrome","termid":"MONDO:0007029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"branchiootorenal syndrome 2","secondary_identifiers":["UMLS:C1970479","MEDGEN:410081","OMIM:610896","DOID:0111424","GARD:15503"],"synonyms":[{"name":"BOR2","type":"related"},{"name":"SIX5 branchio-oto-renal syndrome","type":"exact"},{"name":"branchio-oto-renal syndrome caused by mutation in SIX5","type":"exact"},{"name":"branchiootorenal syndrome 2","type":"exact"},{"name":"branchiootorenal syndrome type 2","type":"exact"}],"termid":"MONDO:0012575","xrefs":{"Monarch":{"xref_id":"0012575"}}}


id: GO:0045469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or prevents the correct R8 cell spacing pattern in a compound eye.","definition_xrefs":["GOC:dph","GOC:tb","PMID:11880339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of R8 cell spacing in compound eye","termid":"GO:0045468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of R8 cell spacing in compound eye","synonyms":[{"name":"down regulation of R8 spacing","type":"exact"},{"name":"down-regulation of R8 spacing","type":"exact"},{"name":"downregulation of R8 spacing","type":"exact"},{"name":"inhibition of R8 spacing","type":"narrow"}],"termid":"GO:0045469"}


id: PBO:0057887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3191","termid":"PBO:0057887"}


id: PBO:0086867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative serine/threonine protein kinase; regulates spermine uptake; involved in polyamine transport; possible mitochondrial protein; PTK1 has a paralog, PTK2, that arose from the whole genome duplication","termid":"PBO:0086867"}


id: PBO:0065641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 20","termid":"PBO:0065641"}


id: PBO:0012547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 3 (predicted)","termid":"PBO:0012547"}


id: PBO:0049806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 1 pseudogene 1","termid":"PBO:0049806"}


id: PBO:0077961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 14-2","termid":"PBO:0077961"}


id: PBO:0090414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex subunit Rpc37","termid":"PBO:0090414"}


id: PBO:0035836
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_ubiquitination_during_vegetative_growth","termid":"PBO:0035836"}


id: PBO:0053061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA associated with SART3 regulation of splicing","termid":"PBO:0053061"}


id: GO:0007493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell becomes capable of differentiating autonomously into an endoderm cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["ISBN:0878932437","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"endodermal cell fate commitment","termid":"GO:0001711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endodermal cell fate determination","synonyms":[{"name":"endoderm cell fate determination","type":"exact"}],"termid":"GO:0007493"}


id: PBO:0084614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Metalloendopeptidase of the mitochondrial inner membrane; important for adaptive responses to various homeostatic insults, preservation of normal mitochondrial function under damage-eliciting conditions, and stability of respiratory supercomplexes; involved in turnover of membrane-embedded proteins; mediates degradation of Cox1p in coa2 mutant cells; zebrafish ortholog has a role in organ development and mouse ortholog is also required for respiratory supercomplex stability","termid":"PBO:0084614"}


id: GO:1900883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 17-methylnonadec-1-ene.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene biosynthetic process","termid":"GO:0043450"},{"relation_name":"is_a","term_name":"17-methylnonadec-1-ene metabolic process","termid":"GO:1900882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"17-methylnonadec-1-ene biosynthetic process","synonyms":[{"name":"17-methylnonadec-1-ene anabolism","type":"exact"},{"name":"17-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"17-methylnonadec-1-ene formation","type":"exact"},{"name":"17-methylnonadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900883"}


id: PBO:0040851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biogenesis of lysosomal organelles complex 1 subunit 5","termid":"PBO:0040851"}


id: PBO:0046465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum aminopeptidase 1","termid":"PBO:0046465"}


id: PBO:0076317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptopodin","termid":"PBO:0076317"}


id: MONDO:0016504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary unilateral adrenal hyperplasia (PUAH) is a surgically-correctable form of primary (hyper) aldosteronism (PA) characterized by renin suppression, unilateral aldosterone hypersecretion, and moderate to severe hypertension secondary to hyperplasia of the adrenal gland.","definition_xrefs":["Orphanet:231580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary aldosteronism","termid":"MONDO:0001422"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary unilateral adrenal hyperplasia","secondary_identifiers":["SCTID:715868005","MEDGEN:905007","UMLS:C4274967","GARD:20620","icd11.foundation:1653668765"],"synonyms":[{"name":"PUAH","type":"exact"}],"termid":"MONDO:0016504","xrefs":{"Monarch":{"xref_id":"0016504"}}}


id: GO:0015943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of formate, also known as methanoate, the anion HCOO- derived from methanoic (formic) acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formate metabolic process","termid":"GO:0015942"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"formate biosynthetic process","synonyms":[{"name":"formate anabolism","type":"exact"},{"name":"formate biosynthesis","type":"exact"},{"name":"formate formation","type":"exact"},{"name":"formate synthesis","type":"exact"},{"name":"formic acid biosynthesis","type":"exact"},{"name":"formic acid biosynthetic process","type":"exact"}],"termid":"GO:0015943"}


id: PBO:0067033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 47, pseudogene","termid":"PBO:0067033"}


id: GO:1903747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment of protein localization to mitochondrion.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16857185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of protein localization","termid":"GO:0070201"},{"relation_name":"regulates","term_name":"establishment of protein localization to mitochondrion","termid":"GO:0072655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of establishment of protein localization to mitochondrion","synonyms":[{"name":"regulation of establishment of protein localisation to mitochondrion","type":"exact"},{"name":"regulation of establishment of protein localization in mitochondrion","type":"exact"}],"termid":"GO:1903747"}


id: GO:0023028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a major histocompatibility complex class I molecules via the lateral surface.","definition_xrefs":["GOC:mtg_signal","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC class I protein binding","termid":"GO:0042288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"MHC class I protein binding, via lateral surface","termid":"GO:0023028"}


id: MONDO:0100536
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tooth agenesis","termid":"MONDO:0005486"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tooth agenesis, selective, with orofacial cleft","secondary_identifiers":["MEDGEN:409991","UMLS:C1970117"],"termid":"MONDO:0100536","xrefs":{"Monarch":{"xref_id":"0100536"}}}


id: PBO:0049677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HADHA pseudogene 1","termid":"PBO:0049677"}


id: PBO:0109103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 41, pseudogene","termid":"PBO:0109103"}


id: MONDO:0000583
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"B cell deficiency","termid":"MONDO:0002211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"immunoglobulin beta deficiency","secondary_identifiers":["DOID:0060026","UMLS:C3502055","MESH:C567200","MEDGEN:502457"],"synonyms":[{"name":"IgB deficiency","type":"related"}],"termid":"MONDO:0000583","xrefs":{"Monarch":{"xref_id":"0000583"}}}


id: MONDO:0016509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcornea-posterior megalolenticonus-persistent fetal vasculature-coloboma syndrome","secondary_identifiers":["UMLS:C4751163","MEDGEN:1667341","Orphanet:231736","GARD:10938"],"synonyms":[{"name":"MPPC syndrome","type":"exact"},{"name":"microcornea posterior megalolenticonus persistent fetal vasculature coloboma","type":"related"},{"name":"microcornea posterior megalolenticonus persistent foetal vasculature coloboma","type":"related"}],"termid":"MONDO:0016509","xrefs":{"Monarch":{"xref_id":"0016509"}}}


id: MONDO:1011883
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dilute coat color with neurological defects, non-human animal","secondary_identifiers":["OMIA:001501"],"termid":"MONDO:1011883","xrefs":{"Monarch":{"xref_id":"1011883"}}}


id: GO:0052682
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate + H2O = epi-cedrol + diphosphate.","definition_xrefs":["RHEA:26115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"epi-cedrol synthase activity","secondary_identifiers":["KEGG_REACTION:R09140","MetaCyc:RXN-10004","EC:4.2.3.39"],"synonyms":[{"name":"(2E,6E)-farnesyl-diphosphate diphosphate-lyase (8-epi-cedrol-forming) activity","type":"exact"},{"name":"8-epicedrol synthase activity","type":"exact"},{"name":"epicedrol synthase activity","type":"exact"}],"termid":"GO:0052682"}


id: PBO:0075004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-15","termid":"PBO:0075004"}


id: PBO:0030996
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cytoplasmic_protein_level_during_vegetative_growth","termid":"PBO:0030996"}


id: GO:0015437
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a lipopolysaccharide from the cytosolic to the exoplasmic leaflet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["EC:7.5.2.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floppase activity","termid":"GO:0140328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0140303"],"is_obsolete":false,"name":"lipopolysaccharide floppase activity","synonyms":[{"name":"ATP-dependent intramembrane lipopolysaccharide transporter activity","type":"exact"},{"name":"ATPase-coupled intramembrane lipopolysaccharide transporter activity","type":"broad"},{"name":"LPS-transporting ATPase activity","type":"exact"},{"name":"lipopolysaccharide floppase activity (cytosolic to exoplasmic leaflet)","type":"exact"},{"name":"lipopolysaccharide-transporting ATPase activity","type":"exact"}],"termid":"GO:0015437"}


id: MONDO:0001374
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal cell neoplasm that affects the urinary bladder.","definition_xrefs":["NCIT:C4669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder cancer","termid":"MONDO:0001187"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder sarcoma","secondary_identifiers":["MEDGEN:87612","DOID:11812","SCTID:278046008","UMLS:C0349666"],"synonyms":[{"name":"bladder sarcoma","type":"exact"},{"name":"sarcoma of bladder","type":"exact"},{"name":"sarcoma of the bladder","type":"exact"},{"name":"sarcoma of the urinary bladder","type":"exact"},{"name":"sarcoma of urinary bladder","type":"exact"},{"name":"urinary bladder sarcoma","type":"exact"}],"termid":"MONDO:0001374","xrefs":{"Monarch":{"xref_id":"0001374"}}}


id: PR:Q96TL7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rap1 gene.","definition_xrefs":["UniProtKB:Q96TL7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding protein rap1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1778.02","synonyms":[{"name":"Spom972h-rap1","type":"exact"}],"termid":"PR:Q96TL7"}


id: PBO:0081241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF8-ERVK3-1 readthrough (NMD candidate)","termid":"PBO:0081241"}


id: PBO:0038720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 15","termid":"PBO:0038720"}


id: GO:1900676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of F-9775B biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of F-9775B biosynthetic process","termid":"GO:1900675"},{"relation_name":"is_a","term_name":"negative regulation of polyketide biosynthetic process","termid":"GO:1900733"},{"relation_name":"negatively_regulates","term_name":"F-9775B biosynthetic process","termid":"GO:1900614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of F-9775B biosynthetic process","synonyms":[{"name":"down regulation of F-9775B anabolism","type":"exact"},{"name":"down regulation of F-9775B biosynthesis","type":"exact"},{"name":"down regulation of F-9775B biosynthetic process","type":"exact"},{"name":"down regulation of F-9775B formation","type":"exact"},{"name":"down regulation of F-9775B synthesis","type":"exact"},{"name":"down-regulation of F-9775B anabolism","type":"exact"},{"name":"down-regulation of F-9775B biosynthesis","type":"exact"},{"name":"down-regulation of F-9775B biosynthetic process","type":"exact"},{"name":"down-regulation of F-9775B formation","type":"exact"},{"name":"down-regulation of F-9775B synthesis","type":"exact"},{"name":"downregulation of F-9775B anabolism","type":"exact"},{"name":"downregulation of F-9775B biosynthesis","type":"exact"},{"name":"downregulation of F-9775B biosynthetic process","type":"exact"},{"name":"downregulation of F-9775B formation","type":"exact"},{"name":"downregulation of F-9775B synthesis","type":"exact"},{"name":"inhibition of F-9775B anabolism","type":"exact"},{"name":"inhibition of F-9775B biosynthesis","type":"exact"},{"name":"inhibition of F-9775B biosynthetic process","type":"narrow"},{"name":"inhibition of F-9775B formation","type":"exact"},{"name":"inhibition of F-9775B synthesis","type":"exact"},{"name":"negative regulation of F-9775B anabolism","type":"exact"},{"name":"negative regulation of F-9775B biosynthesis","type":"exact"},{"name":"negative regulation of F-9775B formation","type":"exact"},{"name":"negative regulation of F-9775B synthesis","type":"exact"}],"termid":"GO:1900676"}


id: GO:1902643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process.","definition_xrefs":["GOC:di","PMID:22562153","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phospholipid catabolic process","termid":"GO:0060697"},{"relation_name":"is_a","term_name":"regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","termid":"GO:1902641"},{"relation_name":"positively_regulates","term_name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","termid":"GO:1902634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","synonyms":[{"name":"activation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"narrow"},{"name":"activation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","type":"narrow"},{"name":"activation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"narrow"},{"name":"activation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"narrow"},{"name":"positive regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"exact"},{"name":"positive regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"exact"},{"name":"positive regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"exact"},{"name":"up regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"exact"},{"name":"up regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","type":"exact"},{"name":"up regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"exact"},{"name":"up regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"exact"},{"name":"up-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"exact"},{"name":"up-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","type":"exact"},{"name":"up-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"exact"},{"name":"up-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"exact"},{"name":"upregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"exact"},{"name":"upregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","type":"exact"},{"name":"upregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"exact"},{"name":"upregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"exact"}],"termid":"GO:1902643"}


id: _global:causal_relation_between_material_entity_and_a_process
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A relationship that holds between a material entity and a process in which causality is involved, with either the material entity or some part of the material entity exerting some influence over the process, or the process influencing some aspect of the material entity.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"_global:causally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causal_relation_between_material_entity_and_a_process","secondary_identifiers":["RO:0002595"],"termid":"_global:causal_relation_between_material_entity_and_a_process"}


id: RO:0002249
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of has active ingredient","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"active_ingredient_in'","termid":"RO:0002249"}


id: MONDO:0004049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neurotic reactions to unusual, severe, or overwhelming military stress.","definition_xrefs":["MESH:D003130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute stress disorder","termid":"MONDO:0003763"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"combat disorder","secondary_identifiers":["UMLS:C0009426","SCTID:279611005","DOID:6950","MEDGEN:40403"],"synonyms":[{"name":"Shocks, shell","type":"related"},{"name":"combat disorder","type":"exact"},{"name":"combat neuroses","type":"related"},{"name":"combat neurosis","type":"exact"},{"name":"combat stress disorder","type":"related"},{"name":"combat stress disorders","type":"related"},{"name":"disorder, combat","type":"related"},{"name":"disorder, combat stress","type":"related"},{"name":"disorders, combat","type":"related"},{"name":"disorders, combat stress","type":"related"},{"name":"neuroses, combat","type":"related"},{"name":"neuroses, war","type":"related"},{"name":"neurosis, combat","type":"related"},{"name":"neurosis, war","type":"related"},{"name":"shell Shocks","type":"related"},{"name":"shell shock","type":"related"},{"name":"shock, shell","type":"related"},{"name":"stress disorder, combat","type":"related"},{"name":"stress disorders, combat","type":"related"},{"name":"war neuroses","type":"related"},{"name":"war neurosis","type":"related"}],"termid":"MONDO:0004049","xrefs":{"Monarch":{"xref_id":"0004049"}}}


id: PBO:0032731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfite reductase beta subunit Sir1","termid":"PBO:0032731"}


id: MONDO:0003442
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papillary epithelial neoplasm that involves the urinary bladder urothelium.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary urothelial neoplasm","termid":"MONDO:0003443"},{"relation_name":"is_a","term_name":"urinary bladder neoplasm","termid":"MONDO:0004987"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bladder papillary urothelial neoplasm","secondary_identifiers":["MEDGEN:267741","DOID:5432","NCIT:C39857","UMLS:C1511197"],"synonyms":[{"name":"bladder papillary transitional cell neoplasm","type":"exact"},{"name":"bladder papillary urothelial neoplasm","type":"exact"},{"name":"urinary bladder papillary transitional cell neoplasm","type":"exact"},{"name":"urinary bladder papillary urothelial neoplasm","type":"exact"},{"name":"urinary bladder urothelium papillary epithelial neoplasm","type":"exact"}],"termid":"MONDO:0003442","xrefs":{"Monarch":{"xref_id":"0003442"}}}


id: FYPO:0009070
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of itraconazole than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0002682"],"is_obsolete":false,"name":"resistance to itraconazole","synonyms":[{"name":"resistance to itraconazole during mitotic cell cycle","type":"related"},{"name":"resistance to itraconazole during vegetative growth","type":"exact"},{"name":"resistant to itraconazole","type":"exact"}],"termid":"FYPO:0009070"}


id: PR:O74792
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- snf59 gene.","definition_xrefs":["UniProtKB:O74792","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF global transcription activator complex subunit snf59 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.09c","synonyms":[{"name":"Spom972h-snf59","type":"exact"}],"termid":"PR:O74792"}


id: GO:0004417
data:
  {"annotated_genes":["SJAG_00381"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93780],"is_not":false,"summary":null,"term":"GO:0004417"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-(2-hydroxyethyl)-4-methylthiazole + ATP = 4-methyl-5-(2-phosphoethyl)-thiazole + ADP + 2 H+.","definition_xrefs":["RHEA:24212","EC:2.7.1.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00381":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hydroxyethylthiazole kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R04448","MetaCyc:THIAZOLSYN3-RXN"],"synonyms":[{"name":"4-methyl-5-(beta-hydroxyethyl)thiazole kinase activity","type":"related"},{"name":"ATP:4-methyl-5-(2-hydroxyethyl)thiazole 2-phosphotransferase activity","type":"related"},{"name":"hydroxyethylthiazole kinase (phosphorylating)","type":"related"}],"termid":"GO:0004417","terms_by_termid":{"GO:0004417":null}}


id: PBO:0031725
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_recombination","termid":"PBO:0031725"}


id: PBO:0091153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab-specific(Ryh1/Ypt6) Ric1-Rgp1 guanyl-nucleotide exchange factor subunit Rgp1/Sat1","termid":"PBO:0091153"}


id: PBO:0047897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(7)(p13)","termid":"PBO:0047897"}


id: PBO:0085565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein disulfide isomerase; multifunctional oxidoreductase of the ER lumen, essential for disulfide bond formation in secretory and cell-surface proteins, processing of non-native disulfide bonds; Ero1p activator; complexes with exomannosidase, Mnl1p to facilitate the recognition of misfolded glycoproteins and the trimming of glycan Man8GlcNAc2 to Man7GlcNAc2 on substrates, thereby accelerating ERAD; PDI1 has a paralog, EUG1, that arose from the whole genome duplication","termid":"PBO:0085565"}


id: GO:0043182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of transporting sodium ions into, and confining within, a vacuole.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar sequestering","termid":"GO:0043181"},{"relation_name":"part_of","term_name":"intracellular sodium ion homeostasis","termid":"GO:0006883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0098771"],"is_obsolete":false,"name":"vacuolar sequestering of sodium ion","synonyms":[{"name":"sequestering of sodium ion (Na+) in vacuole","type":"exact"},{"name":"sequestration of sodium ion (Na+) in vacuole","type":"exact"},{"name":"sodium ion (Na+) retention in vacuole","type":"exact"},{"name":"sodium ion (Na+) storage in vacuole","type":"exact"},{"name":"vacuolar sequestering of sodium ion (Na+)","type":"exact"},{"name":"vacuolar sequestration of sodium ion (Na+)","type":"exact"},{"name":"vacuolar sodium ion (Na+) retention","type":"exact"},{"name":"vacuolar sodium ion (Na+) storage","type":"exact"}],"termid":"GO:0043182"}


id: GO:0042823
data:
  {"annotated_genes":["SJAG_00252","SJAG_00283","SJAG_00707","SJAG_01383","SJAG_01881","SJAG_00691"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63766,87198,94980],"is_not":false,"summary":null,"term":"GO:0042823"},{"annotations":[92300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[99189,115193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[111318],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyridoxal phosphate, pyridoxal phosphorylated at the hydroxymethyl group of C-5, the active form of vitamin B6.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin B6 biosynthetic process","termid":"GO:0042819"},{"relation_name":"is_a","term_name":"pyridoxal phosphate metabolic process","termid":"GO:0042822"},{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00252":null,"SJAG_00283":null,"SJAG_00691":null,"SJAG_00707":null,"SJAG_01383":null,"SJAG_01881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"pyridoxal phosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["MetaCyc:PWY0-845"],"synonyms":[{"name":"active vitamin B6 biosynthesis","type":"exact"},{"name":"active vitamin B6 biosynthetic process","type":"exact"},{"name":"pyridoxal phosphate anabolism","type":"exact"},{"name":"pyridoxal phosphate biosynthesis","type":"exact"},{"name":"pyridoxal phosphate formation","type":"exact"},{"name":"pyridoxal phosphate synthesis","type":"exact"}],"termid":"GO:0042823","terms_by_termid":{"GO:0009443":null,"GO:0010144":null,"GO:0036001":null,"GO:0042823":null}}


id: PBO:0045138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal assembly factor 6","termid":"PBO:0045138"}


id: GO:1990439
data:
  {"annotated_genes":["SJAG_03185","SJAG_03893"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95461,116576],"is_not":false,"summary":null,"term":"GO:1990439"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: MAP kinase threonine phosphate + H2O = MAP kinase threonine + phosphate and MAP kinase serine phosphate + H2O = MAP kinase serine + phosphate.","definition_xrefs":["PMID:10398679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase activity","termid":"GO:0004722"},{"relation_name":"is_a","term_name":"MAP kinase phosphatase activity","termid":"GO:0033549"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03185":null,"SJAG_03893":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0140096","GO:0016788","GO:0003674","GO:0016787","GO:0003824","GO:0004721"],"is_obsolete":false,"name":"MAP kinase serine/threonine phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990439","terms_by_termid":{"GO:1990439":null}}


id: MONDO:0044239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete median-ulnar nerve communications (obsolete MONDO:0044239)","secondary_identifiers":["OMIM:155150"],"synonyms":[{"name":"Martin-Gruber Median-ulnar anastomosis","type":"related"},{"name":"median-ulnar nerve communications","type":"related"}],"termid":"MONDO:0044239","xrefs":{"Monarch":{"xref_id":"0044239"}}}


id: GO:0090574
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex, located in the nucleus, that possesses activity that prevents or downregulates transcription from a RNA polymerase V promoter.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription repressor complex","termid":"GO:0017053"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"RNA polymerase V transcription repressor complex","termid":"GO:0090574"}


id: FYPO:0007172
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the proportion of cells in the population remains viable after entering stationary phase does not change in the presence of micafungin. Normally, wild-type cell populations survive longer in the presence of micafungin than in its absence.","definition_xrefs":["PomBase:mah","PMID:31601154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"stationary phase viability unaffected by micafungin","synonyms":[{"name":"chronological lifespan unaffected by micafungin","type":"related"},{"name":"loss of chronological lifespan extension by micafungin","type":"related"},{"name":"loss of stationary phase viability extension in presence of micafungin","type":"exact"}],"termid":"FYPO:0007172"}


id: PBO:0078004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor associated factor 4","termid":"PBO:0078004"}


id: PBO:0002011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centaurin ADOP ribosylation factor GTPase activating protein family (predicted)","termid":"PBO:0002011"}


id: FYPO:0006356
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromatin remodeling, i.e. any dynamic structural change to chromatin, is abnormal.","definition_xrefs":["PomBase:mah","GO:0006338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization","termid":"FYPO:0000642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000641","FYPO:0005447"],"is_obsolete":false,"name":"abnormal chromatin remodeling","synonyms":[{"name":"abnormal chromatin modeling","type":"exact"},{"name":"abnormal chromatin remodelling","type":"exact"}],"termid":"FYPO:0006356"}


id: MONDO:0016380
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acquired hypertrichosis lanuginosa is a rare cutaneous paraneoplastic disease characterized by the presence of excessive lanugo-type hair on the glabrous skin of face, neck, trunk and limbs that can be associated with additional clinical features such as burning glossitis, papillary hypertrophy of the tongue, diarrhea, dysgeusia, and/or weight loss. It is associated with lymphoma or cancer of the gastrointestinal system, urinary tract, lung, breast, uterus or ovary.","definition_xrefs":["Orphanet:2221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrichosis","termid":"MONDO:0019280"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acquired hypertrichosis lanuginosa","secondary_identifiers":["GARD:2864","MEDGEN:87468","icd11.foundation:1885858920","SCTID:25967007","ICD10CM:L68.1","UMLS:C0343072"],"synonyms":[{"name":"hypertrichosis lanuginosa, acquired","type":"related"}],"termid":"MONDO:0016380","xrefs":{"Monarch":{"xref_id":"0016380"}}}


id: MONDO:0800450
data:
  {"annotated_genes":["SJAG_04993"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0000208"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04993":null},"genotype_count":0,"is_obsolete":false,"name":"microcephaly, short stature, and impaired glucose metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1631599","UMLS:C4552103","OMIMPS:616033"],"termid":"MONDO:0800450","terms_by_termid":{"MONDO:0000208":null},"xrefs":{"Monarch":{"xref_id":"0800450"}}}


id: PBO:0067212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 278, pseudogene","termid":"PBO:0067212"}


id: MONDO:0014549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lethal congenital contracture syndrome in which the cause of the disease is a mutation in the ZBTB42 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lethal congenital contracture syndrome","termid":"MONDO:0017436"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal congenital contracture syndrome 6","secondary_identifiers":["MEDGEN:864123","OMIM:616248","UMLS:C4015686"],"synonyms":[{"name":"LCCS6","type":"related"},{"name":"ZBTB42 lethal congenital contracture syndrome","type":"exact"},{"name":"lethal congenital contracture syndrome 6","type":"exact"},{"name":"lethal congenital contracture syndrome caused by mutation in ZBTB42","type":"exact"},{"name":"lethal congenital contracture syndrome type 6","type":"exact"}],"termid":"MONDO:0014549","xrefs":{"Monarch":{"xref_id":"0014549"}}}


id: MONDO:0013616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary pigmented nodular adrenocortical disease in which the cause of the disease is a mutation in the PDE8B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary pigmented nodular adrenocortical disease","termid":"MONDO:0015999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pigmented nodular adrenocortical disease, primary, 3","secondary_identifiers":["MEDGEN:481724","GARD:15769","DOID:0070548","UMLS:C3280094","OMIM:614190"],"synonyms":[{"name":"Cushing syndrome, adrenal, due to PPNAD3","type":"related"},{"name":"PDE8B primary pigmented nodular adrenocortical disease","type":"exact"},{"name":"PPNAD3","type":"related"},{"name":"pigmented nodular adrenocortical disease, primary, 3","type":"exact"},{"name":"pigmented nodular adrenocortical disease, primary, type 3","type":"exact"},{"name":"primary pigmented nodular adrenocortical disease caused by mutation in PDE8B","type":"exact"}],"termid":"MONDO:0013616","xrefs":{"Monarch":{"xref_id":"0013616"}}}


id: PBO:0045103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA methyltransferase 1 associated protein 1","termid":"PBO:0045103"}


id: PBO:0005788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene wtf element Wtf24","termid":"PBO:0005788"}


id: PATO:0000164
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000164 relative temporal (obsolete PATO:0000164)","termid":"PATO:0000164"}


id: GO:0051604
data:
  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id: GO:0018338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a protein amino acid by cinnamylation.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein amino acid cinnamylation (obsolete GO:0018338)","synonyms":[{"name":"protein amino acid cinnamylation","type":"exact"}],"termid":"GO:0018338"}


id: GO:1903751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to hydrogen peroxide.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18681888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hydrogen peroxide-mediated programmed cell death","termid":"GO:1901299"},{"relation_name":"is_a","term_name":"negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway","termid":"GO:1902176"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","termid":"GO:1903750"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to hydrogen peroxide","termid":"GO:0036481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","synonyms":[{"name":"down regulation of H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"down regulation of hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"down regulation of intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"},{"name":"down regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"exact"},{"name":"down-regulation of H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"down-regulation of hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"exact"},{"name":"downregulation of H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"downregulation of hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"exact"},{"name":"inhibition of H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"inhibition of hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"narrow"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to H2O2","type":"narrow"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"narrow"},{"name":"negative regulation of H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"negative regulation of hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"negative regulation of intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"}],"termid":"GO:1903751"}


id: PBO:0049859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2","termid":"PBO:0049859"}


id: PBO:0088060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-protein ligase (E3); controls septin dynamics, spindle position checkpoint (SPOC) with ligase Dma2p by regulating recruitment of Elm1p to bud neck; regulates levels of eIF2 subunit Gcd11p, as well as abundance, localization, and ubiquitination of Cdk inhibitory kinase Swe1p; ubiquitinates cyclin Pcl1p; ortholog of human RNF8, similar to human Chfr; contains FHA, RING fingers; DMA1 has a paralog, DMA2, that arose from the whole genome duplication","termid":"PBO:0088060"}


id: PBO:0068769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 6, pseudogene","termid":"PBO:0068769"}


id: PBO:0063356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCOTH pseudogene 1","termid":"PBO:0063356"}


id: PBO:0043132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor","termid":"PBO:0043132"}


id: PBO:0004733
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schizophrenia","termid":"PBO:0004733"}


id: GO:1904491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a ciliary transition zone.","definition_xrefs":["PMID:21422230","GOC:TermGenie","GO_REF:0000087","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cilium","termid":"GO:0061512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to ciliary transition zone","synonyms":[{"name":"protein localisation in ciliary transition zone","type":"exact"},{"name":"protein localisation to ciliary transition zone","type":"exact"},{"name":"protein localization in ciliary transition zone","type":"exact"}],"termid":"GO:1904491"}


id: GO:0051143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving propanediol, CH3-CHOH-CH2OH, a sweet, colorless, viscous, hygroscopic liquid used as an antifreeze, in brake fluid and as a humectant in cosmetics and personal care items.","definition_xrefs":["PMID:15995211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycol metabolic process","termid":"GO:0042844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"propanediol metabolic process","synonyms":[{"name":"1,2-dihydroxypropane metabolic process","type":"exact"},{"name":"1,2-dihydroxypropane metabolism","type":"exact"},{"name":"propanediol metabolism","type":"exact"},{"name":"propylene glycol metabolic process","type":"exact"},{"name":"propylene glycol metabolism","type":"exact"}],"termid":"GO:0051143"}


id: PBO:0001691
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.1.-","termid":"PBO:0001691"}


id: PBO:0052668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 36","termid":"PBO:0052668"}


id: PBO:0045588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 3","termid":"PBO:0045588"}


id: MONDO:0002611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete benign epilepsy with centrotemporal spikes (obsolete MONDO:0002611)","termid":"MONDO:0002611","xrefs":{"Monarch":{"xref_id":"0002611"}}}


id: PR:Q09725
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mis4 gene.","definition_xrefs":["UniProtKB:Q09725","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sister chromatid cohesion protein mis4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.05c","synonyms":[{"name":"SCC2 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mis4","type":"exact"}],"termid":"PR:Q09725"}


id: PBO:0081846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 780A","termid":"PBO:0081846"}


id: MONDO:0018712
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intermediate, locally aggressive and rarely metastasizing blood vessel neoplasm. It is characterized by the presence of spindle, plump, and epithelioid endothelial cells and cellular atypia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioendothelioma","termid":"MONDO:0021121"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"composite hemangioendothelioma","secondary_identifiers":["UMLS:C1304513","GARD:21907","MEDGEN:220987","NCIT:C45475","Orphanet:458758","SCTID:403984006"],"synonyms":[{"name":"composite hemangioendothelioma","type":"exact"}],"termid":"MONDO:0018712","xrefs":{"Monarch":{"xref_id":"0018712"}}}


id: GO:0052412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving pectin in the cell wall of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont cell wall pectin (obsolete GO:0052412)","termid":"GO:0052412"}


id: PBO:0069812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1098, pseudogene","termid":"PBO:0069812"}


id: GO:0140459
data:
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id: PBO:0069451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 716, pseudogene","termid":"PBO:0069451"}


id: PBO:0052499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 11","termid":"PBO:0052499"}


id: GO:0110117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of compound eye photoreceptor cell differentiation.","definition_xrefs":["GOC:ha","PMID:16377567"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of photoreceptor cell differentiation","termid":"GO:0046534"},{"relation_name":"is_a","term_name":"regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110116"},{"relation_name":"positively_regulates","term_name":"compound eye photoreceptor cell differentiation","termid":"GO:0001751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110117"}


id: PBO:0039764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alu-mediated CDKN1A/p21 transcriptional regulator","termid":"PBO:0039764"}


id: MONDO:0044316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombocytopenia, anemia, and myelofibrosis","secondary_identifiers":["OMIM:617441","UMLS:C4479504","MEDGEN:1378448"],"synonyms":[{"name":"THAMY","type":"related"},{"name":"thrombocytopenia, anemia, and myelofibrosis","type":"exact"}],"termid":"MONDO:0044316","xrefs":{"Monarch":{"xref_id":"0044316"}}}


id: PBO:0026688
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_carboxypeptidase_activity","termid":"PBO:0026688"}


id: MONDO:0024574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary or acquired coagulation disorder characterized by a qualitative or quantitative deficiency of the von Willebrand factor. The latter plays an important role in platelet adhesion. Signs and symptoms include bruises, nose bleeding, gum bleeding following a dental procedure, heavy menstrual bleeding, and gastrointestinal bleeding.","definition_xrefs":["NCIT:C68677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"von Willebrand disease (hereditary or acquired)","secondary_identifiers":["MEDGEN:22686","SCTID:128105004","UMLS:C0042974","ICD9:286.4","MESH:D014842","NANDO:2200682","ICD10CM:D68.0"],"synonyms":[{"name":"VWD","type":"exact"},{"name":"Von Willebrand Disease","type":"exact"},{"name":"von Willebrand disease","type":"related"},{"name":"von Willebrand disorder","type":"exact"},{"name":"von Willebrand's disease","type":"exact"}],"termid":"MONDO:0024574","xrefs":{"Monarch":{"xref_id":"0024574"}}}


id: PBO:0062060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily X member 1 pseudogene","termid":"PBO:0062060"}


id: PBO:0049053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 52","termid":"PBO:0049053"}


id: GO:2001141
data:
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id: FYPO:0006246
data:
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id: PATO:0000998
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  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viscosity quality inhering in a bearer by virtue of the bearer's having viscosity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viscosity","termid":"PATO:0000992"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"viscous","termid":"PATO:0000998"}


id: GO:0051495
data:
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id: GO:0015105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of arsenite from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"arsenite transmembrane transporter activity","termid":"GO:0015105"}


id: MONDO:0002683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A choroid plexus neoplasm that occurs in an adult.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"choroid plexus cancer","termid":"MONDO:0002681"},{"relation_name":"is_a","term_name":"choroid plexus neoplasm","termid":"MONDO:0016717"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adult choroid plexus neoplasm","secondary_identifiers":["UMLS:C0796430","DOID:3542","NCIT:C8568","MEDGEN:163268"],"synonyms":[{"name":"adult choroid plexus cancer","type":"related"},{"name":"adult choroid plexus neoplasm","type":"exact"},{"name":"adult choroid plexus tumor","type":"exact"},{"name":"adult choroid plexus tumour","type":"exact"},{"name":"choroid plexus neoplasm","type":"broad"},{"name":"choroid plexus neoplasm of adults","type":"exact"},{"name":"neoplasm of adult choroid plexus","type":"exact"},{"name":"neoplasm of the adult choroid plexus","type":"exact"},{"name":"tumor of adult choroid plexus","type":"exact"},{"name":"tumor of the adult choroid plexus","type":"exact"},{"name":"tumour of adult choroid plexus","type":"exact"},{"name":"tumour of the adult choroid plexus","type":"exact"}],"termid":"MONDO:0002683","xrefs":{"Monarch":{"xref_id":"0002683"}}}


id: GO:0070622
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity; the bovine complex contains disulfide-linked homodimers of 166- and 51-kDa subunits and two identical, noncovalently associated 56-kDa subunits.","definition_xrefs":["GOC:mah","PMID:8940155"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"},{"relation_name":"part_of","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005773","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase complex","synonyms":[{"name":"N-acetylglucosamine-1-phosphotransferase complex","type":"related"},{"name":"UDP-N-acetylglucosamine:lysosomal-enzyme N-acetylglucosamine-1-phosphotransferase complex","type":"exact"}],"termid":"GO:0070622"}


id: PBO:0031537
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id: PBO:0054171
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1544","termid":"PBO:0054171"}


id: GO:0032833
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