# terms

id: _global:has_component_process
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"w 'has process component' p if p and w are processes,  w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_component","termid":"_global:has_component"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_component_process","secondary_identifiers":["RO:0002018"],"termid":"_global:has_component_process"}


id: PBO:0108557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Esf1","termid":"PBO:0108557"}


id: GO:0009800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cinnamic acid, 3-phenyl-2-propenoic acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid biosynthetic process","termid":"GO:0009699"},{"relation_name":"is_a","term_name":"cinnamic acid metabolic process","termid":"GO:0009803"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"cinnamic acid biosynthetic process","synonyms":[{"name":"cinnamic acid anabolism","type":"exact"},{"name":"cinnamic acid biosynthesis","type":"exact"},{"name":"cinnamic acid formation","type":"exact"},{"name":"cinnamic acid synthesis","type":"exact"},{"name":"cinnamylic acid biosynthesis","type":"exact"},{"name":"cinnamylic acid biosynthetic process","type":"exact"},{"name":"phenylacrylic acid biosynthesis","type":"exact"},{"name":"phenylacrylic acid biosynthetic process","type":"exact"},{"name":"phenylpropenoic acid biosynthesis","type":"exact"},{"name":"phenylpropenoic acid biosynthetic process","type":"exact"}],"termid":"GO:0009800"}


id: PATO:0001531
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality that exists by virtue of the disposition of the cell to adhere to other cells and molecules, through the emergent action of the molecular parts of the cell surface.","definition_xrefs":["PATOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular quality","termid":"PATO:0001396"},{"relation_name":"is_a","term_name":"adhesivity","termid":"PATO:0001431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular adhesivity","termid":"PATO:0001531"}


id: PBO:0072084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 14","termid":"PBO:0072084"}


id: PBO:0070832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 11","termid":"PBO:0070832"}


id: PBO:0057675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1266","termid":"PBO:0057675"}


id: PBO:0009930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peloto ortholog (predicted)","termid":"PBO:0009930"}


id: GO:0030951
data:
  {"annotated_genes":["SJAG_02624","SJAG_01613","SJAG_03540"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98720,117644,118159],"is_not":false,"summary":null,"term":"GO:0030951"}]},"cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of polarized microtubule-based cytoskeletal structures.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"},{"relation_name":"is_a","term_name":"establishment or maintenance of cytoskeleton polarity","termid":"GO:0030952"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01613":null,"SJAG_02624":null,"SJAG_03540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment or maintenance of microtubule cytoskeleton polarity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030951","terms_by_termid":{"GO:0030951":null}}


id: PBO:0042099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 170","termid":"PBO:0042099"}


id: PBO:0063903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIGY divergent transcript","termid":"PBO:0063903"}


id: GO:0018336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydroxylation of peptidyl-tyrosine to form peptidyl-dihydroxyphenylalanine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein hydroxylation","termid":"GO:0018126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-tyrosine hydroxylation","termid":"GO:0018336"}


id: PBO:0053975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1287","termid":"PBO:0053975"}


id: PBO:0048588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase light chain 2","termid":"PBO:0048588"}


id: GO:0102782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + epidihydrocholesterin + O2 + NADPH = (22alpha)-hydroxy-cholestanol + H2O + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cholestanol hydroxylase activity (obsolete GO:0102782)","termid":"GO:0102782"}


id: PBO:0054365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1758","termid":"PBO:0054365"}


id: MONDO:0011637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sener syndrome","secondary_identifiers":["MEDGEN:342924","OMIM:606156","UMLS:C1853616","MESH:C537579"],"synonyms":[{"name":"Sener syndrome","type":"exact"},{"name":"frontonasal dysplasia and dilated Virchow-Robin spaces","type":"related"},{"name":"polycystic brain (cerebrum polycystica vera) associated with ectodermal dysplasia","type":"related"}],"termid":"MONDO:0011637","xrefs":{"Monarch":{"xref_id":"0011637"}}}


id: GO:0070571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of neuron projection regeneration, the regrowth of neuronal processes such as axons or dendrites following their loss or damage.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron projection development","termid":"GO:0010977"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of neuron projection regeneration","termid":"GO:0070570"},{"relation_name":"negatively_regulates","term_name":"neuron projection regeneration","termid":"GO:0031102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuron projection regeneration","synonyms":[{"name":"growth cone collapse","type":"related"}],"termid":"GO:0070571"}


id: PBO:0042628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 3 pseudogene","termid":"PBO:0042628"}


id: PBO:0063714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase 5 pseudogene 3","termid":"PBO:0063714"}


id: GO:0070376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signal transduction mediated by the ERK5 cascade.","definition_xrefs":["ISBN:0896039986","ISBN:0121245462","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of MAPK cascade","termid":"GO:0043408"},{"relation_name":"regulates","term_name":"ERK5 cascade","termid":"GO:0070375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of ERK5 cascade","synonyms":[{"name":"regulation of BMK cascade","type":"exact"},{"name":"regulation of BMK signaling pathway","type":"exact"},{"name":"regulation of BMK signalling pathway","type":"exact"},{"name":"regulation of BMK1 cascade","type":"exact"},{"name":"regulation of ERK5 signaling pathway","type":"exact"},{"name":"regulation of MAPK7 cascade","type":"exact"}],"termid":"GO:0070376"}


id: MOD:01297
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to 5x(13)C labeled L-proline.","definition_xrefs":["PubMed:12716131","Unimod:772#P"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"},{"relation_name":"is_a","term_name":"5x(13)C-labeled residue","termid":"MOD:01832"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5x(13)C labeled L-proline","synonyms":[{"name":"13C(5) Silac label","type":"related"},{"name":"Label:13C(5)","type":"related"}],"termid":"MOD:01297"}


id: MONDO:0018657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"excluded_subClassOf","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"excluded_subClassOf","term_name":"skin pigmentation disorder","termid":"MONDO:0019288"},{"relation_name":"excluded_subClassOf","term_name":"obsolete hereditary alopecia (obsolete MONDO:0021034)","termid":"MONDO:0021034"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"pigmentation defects-palmoplantar keratoderma-skin carcinoma syndrome","secondary_identifiers":["UMLS:C5681108","GARD:17776","OMIM:618373","Orphanet:447961","MEDGEN:1807813"],"synonyms":[{"name":"CANCER, ALOPECIA, PIGMENT DYSCRASIA, ONYCHODYSTROPHY, AND KERATODERMA","type":"related"},{"name":"CAPOK","type":"related"}],"termid":"MONDO:0018657","xrefs":{"Monarch":{"xref_id":"0018657"}}}


id: FYPO:0000123
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which vacuoles are larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar morphology during vegetative growth","termid":"FYPO:0000368"},{"relation_name":"is_a","term_name":"large vacuoles","termid":"FYPO:0007821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"large vacuoles during vegetative growth","synonyms":[{"name":"enlarged vacuoles during vegetative growth","type":"exact"},{"name":"large vacuoles during mitotic cell cycle","type":"related"},{"name":"vacuole organization defects, large vacuoles","type":"exact"}],"termid":"FYPO:0000123"}


id: PBO:0048083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 4","termid":"PBO:0048083"}


id: GO:0035527
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxypropanoate + NADP+ = 3-oxopropanoate + H+ + NADPH.","definition_xrefs":["RHEA:26438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-hydroxypropionate dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:RXN-8974","KEGG_REACTION:R09289","EC:1.1.1.298"],"synonyms":[{"name":"3-hydroxypropanoate dehydrogenase (NADP+) activity","type":"exact"},{"name":"3-hydroxypropanoate:NADP+ oxidoreductase","type":"related"},{"name":"3-hydroxypropionate:NADP+ oxidoreductase","type":"related"}],"termid":"GO:0035527"}


id: GO:0006330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete single-stranded DNA binding (obsolete GO:0006330)","synonyms":[{"name":"single-stranded DNA binding","type":"exact"}],"termid":"GO:0006330"}


id: PBO:0042309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD24 molecule pseudogene 3","termid":"PBO:0042309"}


id: PBO:0056101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY6/PLAUR domain containing 6","termid":"PBO:0056101"}


id: SO:0001894
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature ablation whereby the deleted region includes a regulatory region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_ablation","termid":"SO:0001879"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory_region_ablation","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"VEP:regulatory_region_ablation","type":"exact"},{"name":"regulatory region ablation","type":"exact"}],"termid":"SO:0001894"}


id: GO:0042120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving alginic acid, a hydrophilic polysaccharide occurring in, for example, the cell walls of brown algae (brown seaweeds).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"alginic acid metabolic process","synonyms":[{"name":"alginate metabolic process","type":"exact"},{"name":"alginate metabolism","type":"exact"},{"name":"alginic acid metabolism","type":"exact"}],"termid":"GO:0042120"}


id: MONDO:0013412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in which the cause of the disease is a mutation in the TTN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"},{"relation_name":"is_a","term_name":"autosomal dominant titinopathy","termid":"MONDO:0100494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005267","MONDO:0000426","MONDO:0005336"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy 9","secondary_identifiers":["UMLS:C1861065","MESH:C566044","OMIM:613765","DOID:0110315","MEDGEN:348780"],"synonyms":[{"name":"CMH9","type":"exact"},{"name":"TTN hypertrophic cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 9","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, type 9","type":"exact"},{"name":"hypertrophic cardiomyopathy caused by mutation in TTN","type":"exact"},{"name":"hypertrophic cardiomyopathy type 9","type":"exact"}],"termid":"MONDO:0013412","xrefs":{"Monarch":{"xref_id":"0013412"}}}


id: MONDO:0100279
data:
  {"annotated_genes":["SJAG_04146","SJAG_02788"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86683,86684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013967"}]},"cv_name":"mondo","definition":"Any peroxisome biogenesis disorder in which the cause of the disease is a mutation in the PEX11B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Zellweger spectrum disorders","termid":"MONDO:0019609"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02788":null,"SJAG_04146":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0006025","MONDO:0005244","MONDO:0005559","MONDO:0005066"],"is_obsolete":false,"name":"peroxisome biogenesis disorder due to PEX11B defect","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"PEX11B related peroxisome biogenesis disorder","type":"exact"},{"name":"peroxisome biogenesis disorder due to PEX11B defect","type":"exact"}],"termid":"MONDO:0100279","terms_by_termid":{"MONDO:0013967":null},"xrefs":{"Monarch":{"xref_id":"0100279"}}}


id: GO:0019531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of oxalate from one side of a membrane to the other. Oxalate, or ethanedioic acid, occurs in many plants and is highly toxic to animals.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"oxalate transmembrane transporter activity","synonyms":[{"name":"oxalic acid transporter activity","type":"exact"}],"termid":"GO:0019531"}


id: GO:0045813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Wnt signaling pathway, calcium modulating pathway","termid":"GO:0008591"},{"relation_name":"is_a","term_name":"positive regulation of non-canonical Wnt signaling pathway","termid":"GO:2000052"},{"relation_name":"positively_regulates","term_name":"Wnt signaling pathway, calcium modulating pathway","termid":"GO:0007223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of Wnt signaling pathway, calcium modulating pathway","synonyms":[{"name":"activation of frizzled-2 signaling pathway","type":"narrow"},{"name":"positive regulation of Wnt receptor signaling pathway, calcium modulating pathway","type":"exact"},{"name":"positive regulation of Wnt-activated signaling pathway, calcium modulating pathway","type":"exact"},{"name":"positive regulation of frizzled-2 signaling pathway","type":"exact"},{"name":"positive regulation of frizzled-2 signalling pathway","type":"exact"},{"name":"stimulation of frizzled-2 signaling pathway","type":"narrow"},{"name":"up regulation of frizzled-2 signaling pathway","type":"exact"},{"name":"up-regulation of frizzled-2 signaling pathway","type":"exact"},{"name":"upregulation of frizzled-2 signaling pathway","type":"exact"}],"termid":"GO:0045813"}


id: MONDO:0003315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma in situ involving a endometrium.","definition_xrefs":["MONDO:patterns/carcinoma_in_situ"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometrial carcinoma","termid":"MONDO:0002447"},{"relation_name":"is_a","term_name":"uterus carcinoma in situ","termid":"MONDO:0004710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"endometrium carcinoma in situ","secondary_identifiers":["DOID:5172","ICD10CM:D07.0","UMLS:C0346191","MEDGEN:87545","SCTID:92582009","ICD9:233.2"],"synonyms":[{"name":"carcinoma in situ of endometrium","type":"exact"},{"name":"endometrial carcinoma in situ","type":"exact"},{"name":"endometrium in situ carcinoma","type":"exact"},{"name":"stage 0 endometrium carcinoma","type":"exact"}],"termid":"MONDO:0003315","xrefs":{"Monarch":{"xref_id":"0003315"}}}


id: MONDO:0800041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any MELAS syndromein which the cause of the disease is a mutation in the MTTS2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MELAS syndrome","termid":"MONDO:0010789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0005336"],"is_obsolete":false,"name":"MELAS syndrome caused by mutation in MTTS2","synonyms":[{"name":"MTTS2 MELAS syndrome","type":"exact"}],"termid":"MONDO:0800041","xrefs":{"Monarch":{"xref_id":"0800041"}}}


id: MONDO:0020508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete malformation of the neurenteric canal, spinal cord and column (obsolete MONDO:0017085)","termid":"MONDO:0017085"},{"relation_name":"is_a","term_name":"syringomyelia","termid":"MONDO:0017987"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary syringomyelia","secondary_identifiers":["Orphanet:99856","icd11.foundation:257905685","UMLS:C1299627","GARD:19691","SCTID:371076006","MEDGEN:721465"],"synonyms":[{"name":"congenital syringomyelia","type":"exact"}],"termid":"MONDO:0020508","xrefs":{"Monarch":{"xref_id":"0020508"}}}


id: MONDO:0032586
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital diarrhea","termid":"MONDO:0000824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"diarrhea 10, protein-losing enteropathy type","secondary_identifiers":["OMIM:618183","UMLS:C4748579","MEDGEN:1648311"],"synonyms":[{"name":"DIAR10","type":"related"},{"name":"DIARRHEA 10, PROTEIN-LOSING ENTEROPATHY TYPE","type":"related"}],"termid":"MONDO:0032586","xrefs":{"Monarch":{"xref_id":"0032586"}}}


id: FYPO:0002932
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature snoRNA measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered snoRNA or precursor level","termid":"FYPO:0005998"},{"relation_name":"is_a","term_name":"decreased mature ncRNA level","termid":"FYPO:0006466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased mature snoRNA level","synonyms":[{"name":"decreased mature small nucleolar RNA level","type":"exact"},{"name":"decreased mature snoRNA accumulation","type":"related"},{"name":"decreased mature snoRNA level during mitotic cell cycle","type":"related"},{"name":"decreased mature snoRNA level during vegetative growth","type":"exact"},{"name":"decreased mature snoRNA transcript level","type":"broad"},{"name":"decreased snoRNA level","type":"broad"},{"name":"reduced mature snoRNA level","type":"exact"}],"termid":"FYPO:0002932"}


id: MONDO:0025130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An enterovirus infection of swine clinically indistinguishable from foot-and-mouth disease, vesicular stomatitis, and vesicular exanthema of swine. It is caused by a strain of human enterovirus B.","definition_xrefs":["MESH:D013555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swine disease","termid":"MONDO:0024990"},{"relation_name":"is_a","term_name":"enterovirus infectious disease, non-human animal","termid":"MONDO:0700210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swine vesicular disease","synonyms":[{"name":"swine vesicular diseases","type":"related"},{"name":"vesicular disease, swine","type":"related"},{"name":"vesicular diseases, swine","type":"related"}],"termid":"MONDO:0025130","xrefs":{"Monarch":{"xref_id":"0025130"}}}


id: PBO:0063687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progastricsin","termid":"PBO:0063687"}


id: FYPO:0005451
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one of two different alleles of a gene is lost less frequently than normal after a double-strand break forms nearby.","definition_xrefs":["PMID:17724078","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased break-induced loss of heterozygosity","synonyms":[{"name":"decreased break-induced loss of heterozygosity during mitotic cell cycle","type":"related"},{"name":"decreased break-induced loss of heterozygosity during vegetative growth","type":"exact"},{"name":"reduced break-induced loss of heterozygosity","type":"exact"}],"termid":"FYPO:0005451"}


id: PBO:0089268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Puf6","termid":"PBO:0089268"}


id: PBO:0031210
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-snowman-shaped_spore","termid":"PBO:0031210"}


id: GO:0021891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an interneuron residing in the olfactory bulb, from its initial commitment, to the fully functional differentiated cell.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:dgh","GOC:jid","PMID:12626695","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system neuron development","termid":"GO:0021954"},{"relation_name":"part_of","term_name":"olfactory bulb interneuron differentiation","termid":"GO:0021889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory bulb interneuron development","termid":"GO:0021891"}


id: PBO:0085289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisome-specific receptor important for peroxisome inheritance; co-fractionates with peroxisome membranes and co-localizes with peroxisomes in vivo; physically interacts with the myosin V motor Myo2p; INP2 is not an essential gene","termid":"PBO:0085289"}


id: GO:0003974
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine = UDP-N-acetyl-D-galactosamine.","definition_xrefs":["EC:5.1.3.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine 4-epimerase activity","secondary_identifiers":["RHEA:20517","MetaCyc:UDP-N-ACETYLGLUCOSAMINE-4-EPIMERASE-RXN"],"synonyms":[{"name":"UDP acetylglucosamine epimerase activity","type":"related"},{"name":"UDP-GlcNAc 4-epimerase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine 4-epimerase activity","type":"related"},{"name":"uridine 5'-diphospho-N-acetylglucosamine-4-epimerase activity","type":"related"},{"name":"uridine diphosphate N-acetylglucosamine-4-epimerase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine epimerase activity","type":"related"}],"termid":"GO:0003974"}


id: GO:0140629
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of a small conductance calcium-activated potassium channel.","definition_xrefs":["PMID:20562108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel inhibitor activity","termid":"GO:0019870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0140678","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"small conductance calcium-activated potassium channel inhibitor activity","termid":"GO:0140629"}


id: MONDO:0005361
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Eosinophilic esophagitis (EoE) is a chronic, allergic disease of the esophagus characterized clinically by symptoms of esophageal dysfunction (including vomiting, dysphagia, feeding disorders, food impaction and abdominal pain) which persist after treatment with proton pump inhibitors (PPIs).","definition_xrefs":["Orphanet:73247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophagitis","termid":"MONDO:0001409"},{"relation_name":"is_a","term_name":"eosinophilic gastrointestinal disease","termid":"MONDO:0018438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"eosinophilic esophagitis","secondary_identifiers":["MESH:D057765","ICD9:530.13","MEDGEN:83318","ICD10CM:K20.0","DOID:13922","NANDO:1200456","NCIT:C27105","SCTID:235599003","UMLS:C0341106","MedDRA:10064212","EFO:0004232"],"synonyms":[{"name":"EoE","type":"exact"}],"termid":"MONDO:0005361","xrefs":{"Monarch":{"xref_id":"0005361"}}}


id: GO:0034326
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a butanoyl (CH3-[CH2]2-CO-) group to an acceptor molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"butanoyltransferase activity","termid":"GO:0034326"}


id: MOD:00711
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces three hydrogen atoms with three methyl groups, after a proton has been added to form an aminium group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trimethylated residue","termid":"MOD:00430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"trimethylated protonated-residue","synonyms":[{"name":"Me3+Res","type":"exact"}],"termid":"MOD:00711"}


id: MONDO:0015491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vasculitis","termid":"MONDO:0018882"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immune complex mediated vasculitis","secondary_identifiers":["GARD:19984","MEDGEN:1842565","Orphanet:156149","UMLS:C5680655"],"termid":"MONDO:0015491","xrefs":{"Monarch":{"xref_id":"0015491"}}}


id: PBO:0052882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 9-4","termid":"PBO:0052882"}


id: PATO:0001646
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering into a bearer by virtue of the bearer's extending out above or beyond its surface or boundary and outwards in relation to the physical space occupied by another entity.","definition_xrefs":["PATOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protruding","termid":"PATO:0001598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protruding out of","synonyms":[{"name":"exits through","type":"related"},{"name":"exposed","type":"related"},{"name":"extruding from","type":"exact"}],"termid":"PATO:0001646"}


id: GO:0120242
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-iminobutanoate + H2O = 2-oxobutanoate + NH4(+).","definition_xrefs":["RHEA:39975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-iminobutanoate/2-iminopropanoate deaminase","termid":"GO:0120241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"2-iminobutanoate deaminase activity","secondary_identifiers":["MetaCyc:RXN-15123","KEGG_REACTION:R11098"],"synonyms":[{"name":"2-iminobutanoate/2-iminopropanoate deaminase","type":"broad"}],"termid":"GO:0120242"}


id: MONDO:0012244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"prostate cancer, hereditary","termid":"MONDO:0700275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate cancer, hereditary, 5","secondary_identifiers":["MEDGEN:373085","OMIM:609299","GARD:15455","MESH:C563744","UMLS:C1836436"],"synonyms":[{"name":"HPC5","type":"related"},{"name":"prostate cancer, hereditary, 5","type":"exact"},{"name":"prostate cancer, hereditary, type 5","type":"exact"}],"termid":"MONDO:0012244","xrefs":{"Monarch":{"xref_id":"0012244"}}}


id: GO:0015994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving chlorophyll, any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound metabolic process","termid":"GO:0006778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"chlorophyll metabolic process","synonyms":[{"name":"chlorophyll metabolism","type":"exact"}],"termid":"GO:0015994"}


id: PATO:0001171
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An elasticity quality inhering in a bearer by virtue of the bearer's ability to recover its size and shape after deformation in any way.","definition_xrefs":["merriam-webster:merriam-webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elasticity","termid":"PATO:0001031"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elastic","termid":"PATO:0001171"}


id: PBO:0066908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 209","termid":"PBO:0066908"}


id: PBO:0077413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 150A","termid":"PBO:0077413"}


id: GO:0047716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1H-imidazole + acetyl-CoA = N-acetylimidazole + CoA.","definition_xrefs":["RHEA:15813","EC:2.3.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"imidazole N-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03621","MetaCyc:IMIDAZOLE-N-ACETYLTRANSFERASE-RXN"],"synonyms":[{"name":"acetyl-CoA:imidazole N-acetyltransferase activity","type":"related"},{"name":"imidazole acetylase activity","type":"related"},{"name":"imidazole acetyltransferase activity","type":"related"}],"termid":"GO:0047716"}


id: GO:0098694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic vesicle budding from presynaptic endocytic zone membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"regulates","term_name":"synaptic vesicle budding from presynaptic endocytic zone membrane","termid":"GO:0016185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic vesicle budding from presynaptic endocytic zone membrane","termid":"GO:0098694"}


id: PATO:0001910
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape quality inhering in a bearer by virtue of the bearer's one part being layered over another connected part.","definition_xrefs":["PATOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"surface feature shape","termid":"PATO:0001925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folded","termid":"PATO:0001910"}


id: PBO:0060857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA related kinase 3","termid":"PBO:0060857"}


id: MONDO:0043472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by abnormal secretion of adrenocorticotrophic hormone in conjunction with neoplastic growth occurring anywhere in the body. The most common associations are tumors of the bronchus (oat cell or carcinoid), thymic tumors (epithelial or carcinoid), and pancreatic endocrine tumor. (DeVita et al. Cancer, p 1364. 4th edition. Lippincott)","definition_xrefs":["NCIT:C4387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"},{"relation_name":"is_a","term_name":"neoplastic syndrome","termid":"MONDO:0021058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectopic ACTH secretion syndrome","secondary_identifiers":["UMLS:C0001231","SCTID:626004","NANDO:2200351","MEDGEN:103","MESH:D000182"],"synonyms":[{"name":"ACTH syndromes, ectopic","type":"related"},{"name":"ectopic ACTH secretion","type":"exact"},{"name":"ectopic ACTH secretion causing Cushing's syndrome","type":"related"},{"name":"ectopic ACTH secretion syndrome","type":"exact"},{"name":"ectopic ACTH syndrome","type":"exact"},{"name":"ectopic ACTH syndromes","type":"related"},{"name":"hypercortisolism due to nonpituitary tumor","type":"exact"},{"name":"hypercortisolism due to nonpituitary tumour","type":"exact"},{"name":"syndrome, ectopic ACTH","type":"related"},{"name":"syndromes, ectopic ACTH","type":"related"}],"termid":"MONDO:0043472","xrefs":{"Monarch":{"xref_id":"0043472"}}}


id: PBO:0004949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Spf38","termid":"PBO:0004949"}


id: FYPO:0006605
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the S-phase DNA damage checkpoint (also known as the intra-S phase DNA damage checkpoint) is normal (i.e. indistinguishable from wild type) when the cell is exposed to methyl methanesulfonate. The S phase DNA damage checkpoint slows progression through S phase in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal S-phase DNA damage checkpoint","termid":"FYPO:0003530"},{"relation_name":"is_a","term_name":"normal mitotic DNA damage checkpoint during cellular response to methyl methanesulfonate","termid":"FYPO:0006437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000298","FYPO:0000631","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate","synonyms":[{"name":"normal S-phase DNA damage checkpoint activation during cellular response to methyl methanesulfonate","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during cellular response to MMS","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"normal intra-S phase DNA damage checkpoint during cellular response to methyl methanesulfonate","type":"exact"},{"name":"normal mitotic S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0006605"}


id: MOD:00600
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to L-glutamate 5-ethyl ester.","definition_xrefs":["Unimod:280#E","DeltaMass:0","PubMed:9629898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"},{"relation_name":"is_a","term_name":"ethylated residue","termid":"MOD:01339"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamic acid 5-ethyl ester","synonyms":[{"name":"Ethyl","type":"exact"},{"name":"Ethylation","type":"related"}],"termid":"MOD:00600"}


id: PBO:0064182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XI, pseudogene","termid":"PBO:0064182"}


id: MONDO:0020595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease or disorder that involves the retroperitoneal space.","definition_xrefs":["MONDO:patterns/location"],"gene_count":0,"genotype_count":0,"name":"obsolete disorder of retroperitoneum (obsolete MONDO:0020595)","secondary_identifiers":["SCTID:734045002","NCIT:C27667"],"synonyms":[{"name":"disease of retroperitoneal space","type":"exact"},{"name":"disease or disorder of retroperitoneal space","type":"exact"},{"name":"disorder of retroperitoneal space","type":"exact"},{"name":"retroperitoneal disease","type":"exact"},{"name":"retroperitoneal disorder","type":"exact"},{"name":"retroperitoneal space disease","type":"exact"},{"name":"retroperitoneal space disease or disorder","type":"exact"}],"termid":"MONDO:0020595","xrefs":{"Monarch":{"xref_id":"0020595"}}}


id: PBO:0061260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notch 2 N-terminal like C","termid":"PBO:0061260"}


id: MONDO:0012614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the GRIK2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 6","secondary_identifiers":["DOID:0081182","GARD:22542","MEDGEN:370848","OMIM:611092","UMLS:C1970198","MESH:C567017"],"synonyms":[{"name":"GRIK2 autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"MRT6","type":"related"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in GRIK2","type":"exact"},{"name":"intellectual developmental disorder, autosomal recessive 6","type":"exact"},{"name":"intellectual disability, autosomal recessive 6","type":"exact"},{"name":"intellectual disability, autosomal recessive type 6","type":"exact"},{"name":"mental retardation, autosomal recessive 6","type":"related"},{"name":"mental retardation, autosomal recessive type 6","type":"exact"}],"termid":"MONDO:0012614","xrefs":{"Monarch":{"xref_id":"0012614"}}}


id: PBO:0074936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 103A","termid":"PBO:0074936"}


id: MONDO:0007348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete colchicine resistance (obsolete MONDO:0007348)","secondary_identifiers":["OMIM:120080"],"synonyms":[{"name":"colchicine resistance","type":"exact"},{"name":"colchicine sensitivity","type":"related"}],"termid":"MONDO:0007348","xrefs":{"Monarch":{"xref_id":"0007348"}}}


id: PBO:0071468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 9","termid":"PBO:0071468"}


id: MONDO:1012081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tetragametic chimerism, non-human animal","termid":"MONDO:1011918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetragametic chimerism, bighorn sheep","secondary_identifiers":["OMIA:000393-37174"],"termid":"MONDO:1012081","xrefs":{"Monarch":{"xref_id":"1012081"}}}


id: GO:0102224
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-N,N'-diacetylbacillosamine + H2O = 2,4-diacetamido-2,4,6-trideoxy-alpha-D-mannopyranose + GDP + H+.","definition_xrefs":["RHEA:46316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"GDP-2,4-diacetamido-2,4,6-trideoxy-alpha-D-glucopyranose hydrolase/2-epimerase activity","secondary_identifiers":["MetaCyc:RXN-12236"],"termid":"GO:0102224"}


id: PBO:0029692
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_morphology,_single_irregular_mass","termid":"PBO:0029692"}


id: PBO:0069035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 280, pseudogene","termid":"PBO:0069035"}


id: PBO:0087255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase; involved in regulation of ion transport across plasma membrane; carboxyl terminus is essential for glucose-dependent Pma1p activation via phosphorylation of Pma1p-Ser899; enhances spermine uptake; PTK2 has a paralog, PTK1, that arose from the whole genome duplication","termid":"PBO:0087255"}


id: MONDO:0003186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infrequent esophageal carcinoma arising from esophageal glands. (WHO)","definition_xrefs":["NCIT:C5342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoid cystic carcinoma","termid":"MONDO:0004971"},{"relation_name":"is_a","term_name":"esophageal adenocarcinoma","termid":"MONDO:0005028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"esophageal adenoid cystic carcinoma","secondary_identifiers":["DOID:4878","UMLS:C1333441","MEDGEN:232468"],"synonyms":[{"name":"adenoid cystic carcinoma of esophagus","type":"exact"},{"name":"adenoid cystic carcinoma of oesophagus","type":"exact"},{"name":"adenoid cystic carcinoma of the esophagus","type":"exact"},{"name":"adenoid cystic carcinoma of the oesophagus","type":"exact"},{"name":"adenoid cystic carcinoma, esophagus","type":"exact"},{"name":"adenoid cystic carcinoma, oesophagus","type":"exact"},{"name":"adenoid cystic esophagus carcinoma","type":"exact"},{"name":"adenoid cystic oesophagus carcinoma","type":"exact"},{"name":"esophageal adenoid cystic cancer","type":"exact"},{"name":"esophageal adenoid cystic carcinoma","type":"exact"},{"name":"esophagus adenoid cystic carcinoma","type":"exact"},{"name":"oesophagus adenoid cystic carcinoma","type":"exact"}],"termid":"MONDO:0003186","xrefs":{"Monarch":{"xref_id":"0003186"}}}


id: PBO:0088179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc-binding mitochondrial intermembrane space (IMS) protein; involved in a disulfide relay system for IMS import of cysteine-containing proteins; binds Mia40p and stimulates its Erv1p-dependent oxidation, probably by sequestering zinc","termid":"PBO:0088179"}


id: PBO:0077824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 target 3C","termid":"PBO:0077824"}


id: GO:0006026
data:
  {"annotated_genes":["SJAG_00620"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006032"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of aminoglycans, any polymer containing amino groups that consists of more than about 10 monosaccharide residues joined to each other by glycosidic linkages.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycan metabolic process","termid":"GO:0006022"},{"relation_name":"is_a","term_name":"macromolecule catabolic process","termid":"GO:0009057"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00620":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aminoglycan catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"aminoglycan breakdown","type":"exact"},{"name":"aminoglycan catabolism","type":"exact"},{"name":"aminoglycan degradation","type":"exact"}],"termid":"GO:0006026","terms_by_termid":{"GO:0006032":null}}


id: PBO:0088178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zeta subunit of the oligosaccharyltransferase complex of the ER lumen; complex catalyzes asparagine-linked glycosylation of newly synthesized proteins","termid":"PBO:0088178"}


id: PBO:0067391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 496, pseudogene","termid":"PBO:0067391"}


id: GO:0002811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antifungal peptide biosynthesis.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antifungal peptide production","termid":"GO:0002789"},{"relation_name":"is_a","term_name":"negative regulation of antimicrobial peptide biosynthetic process","termid":"GO:0002806"},{"relation_name":"is_a","term_name":"regulation of antifungal peptide biosynthetic process","termid":"GO:0002810"},{"relation_name":"negatively_regulates","term_name":"antifungal peptide biosynthetic process","termid":"GO:0002783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of antifungal peptide biosynthetic process","synonyms":[{"name":"down regulation of antifungal peptide biosynthetic process","type":"exact"},{"name":"down-regulation of antifungal peptide biosynthetic process","type":"exact"},{"name":"downregulation of antifungal peptide biosynthetic process","type":"exact"},{"name":"inhibition of antifungal peptide biosynthetic process","type":"narrow"}],"termid":"GO:0002811"}


id: PBO:0057213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 378c","termid":"PBO:0057213"}


id: MONDO:0021003
data:
  {"annotated_genes":["SJAG_01213"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010408"}]},"cv_name":"mondo","definition":"A disease characterized by the presence of polydactyly, including syndromic and non-syndromic forms.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01213":null},"genotype_count":0,"is_obsolete":false,"name":"polydactyly","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D017689","ICD9:755.00","ICD9:755.0","HP:0010442","MEDGEN:57774","MedDRA:10036063","NCIT:C87110","OMIM:603596","UMLS:C0152427","DOID:1148","SCTID:367506006"],"synonyms":[{"name":"hyperdactyly","type":"exact"},{"name":"polydactylism","type":"exact"},{"name":"polydactyly","type":"exact"},{"name":"polydactyly (disease)","type":"exact"},{"name":"postaxial polydactyly","type":"related"},{"name":"supernumerary digit","type":"related"}],"termid":"MONDO:0021003","terms_by_termid":{"MONDO:0010408":null},"xrefs":{"Monarch":{"xref_id":"0021003"}}}


id: FYPO:0007013
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 5S ribosomal RNA measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal rRNA or precursor level","termid":"FYPO:0006000"},{"relation_name":"is_a","term_name":"normal mature ncRNA level","termid":"FYPO:0006469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal mature 5S rRNA level","synonyms":[{"name":"normal 5S rRNA level","type":"broad"},{"name":"normal mature 5S rRNA accumulation","type":"related"},{"name":"normal mature 5S rRNA level during mitotic cell cycle","type":"related"},{"name":"normal mature 5S rRNA level during vegetative growth","type":"exact"},{"name":"normal mature 5S rRNA transcript level","type":"exact"}],"termid":"FYPO:0007013"}


id: PBO:0082016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZW10 interacting kinetochore protein","termid":"PBO:0082016"}


id: MONDO:0022941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness hypospadias metacarpal and metatarsal syndrome","termid":"MONDO:0022941","xrefs":{"Monarch":{"xref_id":"0022941"}}}


id: GO:0005260
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables passage of a chloride ion through a transmembrane channel that opens when ATP is bound by the channel complex or one of its constituent parts on the intracellular side of the plasma membrane.","definition_xrefs":["PMID:9922375","PMID:24727426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride channel activity","termid":"GO:0005254"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic anion channel activity","termid":"GO:0099095"},{"relation_name":"is_a","term_name":"intracellularly ATP-gated ion channel activity","termid":"GO:0099142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"intracellularly ATP-gated chloride channel activity","secondary_identifiers":["EC:5.6.1.6","Wikipedia:Cystic_fibrosis_transmembrane_conductance_regulator","MetaCyc:3.6.3.49-RXN","TC:3.A.1.202.1","GO:0005224"],"synonyms":[{"name":"CFTR","type":"exact"},{"name":"channel-conductance-controlling ATPase activity","type":"related"},{"name":"cystic fibrosis transmembrane conductance regulator","type":"narrow"}],"termid":"GO:0005260"}


id: PBO:0083032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta-1-pyrroline-5-carboxylate dehydrogenase; nuclear-encoded mitochondrial protein involved in utilization of proline as sole nitrogen source; deficiency of human homolog ALDH4A1 causes type II hyperprolinemia (HPII), an autosomal recessive inborn error of metabolism; human homolog ALDH4A1 can complement yeast null mutant","termid":"PBO:0083032"}


id: SO:0001169
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A ds_RNA_viral_sequence is a viral_sequence that is the sequence of a virus that exists as double stranded RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral_sequence","termid":"SO:0001041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ds_RNA_viral_sequence","synonyms":[{"name":"double stranded RNA virus sequence","type":"exact"},{"name":"ds RNA viral sequence","type":"exact"}],"termid":"SO:0001169"}


id: MONDO:0957111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular channelopathy","termid":"MONDO:0019119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurological muscular channelopathy due to a genetic sodium channel defect","secondary_identifiers":["GARD:19563","Orphanet:98738","UMLS:C5681681","MEDGEN:1842444"],"termid":"MONDO:0957111","xrefs":{"Monarch":{"xref_id":"0957111"}}}


id: PBO:0062233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily B member 15 pseudogene","termid":"PBO:0062233"}


id: GO:0051929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the directed movement of calcium ions via the activity of voltage-gated calcium channels.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of calcium ion transport via voltage-gated calcium channel activity (obsolete GO:0051929)","synonyms":[{"name":"activation of calcium ion transport via voltage gated calcium channel","type":"narrow"},{"name":"positive regulation of calcium ion transport via voltage-gated calcium channel activity","type":"exact"},{"name":"positive regulation of calcium transport via voltage gated calcium channel","type":"exact"},{"name":"stimulation of calcium ion transport via voltage gated calcium channel","type":"narrow"},{"name":"up regulation of calcium ion transport via voltage gated calcium channel","type":"exact"},{"name":"up-regulation of calcium ion transport via voltage gated calcium channel","type":"exact"},{"name":"upregulation of calcium ion transport via voltage gated calcium channel","type":"exact"}],"termid":"GO:0051929"}


id: GO:0072490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving toluene, methylbenzene (formula C7H8), or any of its derivatives.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"toluene-containing compound metabolic process","synonyms":[{"name":"toluene and derivative metabolic process","type":"exact"},{"name":"toluene-containing compound metabolism","type":"exact"}],"termid":"GO:0072490"}


id: GO:0072228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric prebend segment over time, from its formation to the mature structure. The metanephric prebend segment is a part of the metanephric descending thin limb that lies before the bend and exhibits permeabilities characteristic of the ascending limb, especially negligible water permeability.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prebend segment development","termid":"GO:0072066"},{"relation_name":"part_of","term_name":"metanephric descending thin limb development","termid":"GO:0072220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric prebend segment development","termid":"GO:0072228"}


id: PBO:0051819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor associated kinase 4","termid":"PBO:0051819"}


id: GO:1900909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of olefin metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of olefin metabolic process","termid":"GO:1900908"},{"relation_name":"negatively_regulates","term_name":"olefin metabolic process","termid":"GO:1900673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of olefin metabolic process","synonyms":[{"name":"down regulation of olefin metabolic process","type":"exact"},{"name":"down regulation of olefin metabolism","type":"related"},{"name":"down-regulation of olefin metabolic process","type":"exact"},{"name":"down-regulation of olefin metabolism","type":"related"},{"name":"downregulation of olefin metabolic process","type":"exact"},{"name":"downregulation of olefin metabolism","type":"related"},{"name":"inhibition of olefin metabolic process","type":"narrow"},{"name":"inhibition of olefin metabolism","type":"related"},{"name":"negative regulation of olefin metabolism","type":"related"}],"termid":"GO:1900909"}


id: PBO:0004673
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperornithinemia","termid":"PBO:0004673"}


id: PATO:0001214
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001214 temparature_unit (obsolete PATO:0001214)","termid":"PATO:0001214"}


id: GO:0038108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by leptin binding to its receptor on the surface of a cell, which reduces appetite, the desire or physical craving for food.","definition_xrefs":["PMID:19150989","GOC:vk","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of appetite","termid":"GO:0032099"},{"relation_name":"is_a","term_name":"leptin-mediated signaling pathway","termid":"GO:0033210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of appetite by leptin-mediated signaling pathway","synonyms":[{"name":"inhibition of appetite by leptin signaling","type":"exact"},{"name":"negative regulation of appetite by leptin-mediated signalling pathway","type":"exact"},{"name":"reduction of appetite by leptin-mediated signaling","type":"exact"},{"name":"suppression of appetite by leptin-mediated signaling pathway","type":"exact"}],"termid":"GO:0038108"}


id: GO:0018836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an alkylmercury + H+ = an alkane + Hg2+.","definition_xrefs":["RHEA:18777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alkylmercury lyase activity","secondary_identifiers":["MetaCyc:ALKYLMERCURY-LYASE-RXN","EC:4.99.1.2"],"synonyms":[{"name":"alkylmercury mercuric-lyase (alkane-forming)","type":"related"},{"name":"alkylmercury mercuric-lyase activity","type":"related"},{"name":"organomercurial lyase activity","type":"related"},{"name":"organomercury lyase activity","type":"related"}],"termid":"GO:0018836"}


id: PBO:0017546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiosulfate sulfurtransferase, URM1 activating enzyme E1-type Uba42 (predicted)","termid":"PBO:0017546"}


id: PATO:0005003
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's resembling the form of a paddle.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paddle shaped","termid":"PATO:0005003"}


id: MONDO:0005822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A stage of syphilis characterized by the serologic evidence of infection by Treponema pallidum without evidence of accompanying signs or symptoms related to the disease.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syphilis","termid":"MONDO:0005976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"latent syphilis","secondary_identifiers":["MESH:D013592","ICD9:097.1","SCTID:444150000","UMLS:C0039133","EFO:0007340","DOID:9531","MEDGEN:21056","NCIT:C35056"],"termid":"MONDO:0005822","xrefs":{"Monarch":{"xref_id":"0005822"}}}


id: MONDO:0016940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 3p duplication is a chromosome abnormality that occurs when there is an extra copy of genetic material on the short arm (p) of chromosome 3. The severity of the condition and the signs and symptoms depend on the size and location of the duplication and which genes are involved. Features that often occur in people with chromosome 3p duplication include developmental delay, intellectual disability, behavioral problems and distinctive facial features. Chromosome 3p duplication can be de novo or inherited from a parent with a balanced translocation. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0005343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 3","termid":"MONDO:0016923"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the short arm of chromosome 3","secondary_identifiers":["GARD:5343","MESH:C536811","MEDGEN:1826042","UMLS:C5679720","icd11.foundation:514472294","Orphanet:262707"],"synonyms":[{"name":"3p duplication","type":"related"},{"name":"3p trisomy","type":"related"},{"name":"Duplication 3p","type":"related"},{"name":"chromosome 3p duplication","type":"related"},{"name":"partial duplication of chromosome 3p","type":"exact"},{"name":"partial duplication of the short arm of chromosome type 3","type":"exact"},{"name":"partial trisomy 3p","type":"related"},{"name":"partial trisomy of chromosome 3p","type":"exact"},{"name":"partial trisomy of the short arm of chromosome 3","type":"exact"},{"name":"trisomy 3p","type":"related"}],"termid":"MONDO:0016940","xrefs":{"Monarch":{"xref_id":"0016940"}}}


id: MONDO:0019251
data:
  {"annotated_genes":["SJAG_04819","SJAG_02949","SJAG_01868"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012221"},{"annotations":[84664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012222"},{"annotations":[84962,84963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009737"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"glycoproteinosis","termid":"MONDO:0017731"},{"relation_name":"is_a","term_name":"inborn carbohydrate metabolic disorder","termid":"MONDO:0019214"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01868":null,"SJAG_02949":null,"SJAG_04819":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0002561"],"is_obsolete":false,"name":"oligosaccharidosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:1155842003","GARD:18977","icd11.foundation:1805681916","MEDGEN:1787409","Orphanet:79215","UMLS:C5547641"],"termid":"MONDO:0019251","terms_by_termid":{"MONDO:0009737":null,"MONDO:0012221":null,"MONDO:0012222":null},"xrefs":{"Monarch":{"xref_id":"0019251"}}}


id: MONDO:0001087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by an enduring pattern of inability to establish close relationships coupled with cognitive or perceptual distortions, odd beliefs and speech, and eccentric behavior and appearance.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"personality disorder","termid":"MONDO:0002028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schizotypal personality disorder","secondary_identifiers":["NCIT:C92632","ICD9:301.22","SCTID:31027006","UMLS:C1443045","MESH:D012569","DOID:10646","MEDGEN:1826899"],"termid":"MONDO:0001087","xrefs":{"Monarch":{"xref_id":"0001087"}}}


id: GO:0061142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from a mesothelial cell to an epithelial cell and contributes to the development of the lung.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in lung development","termid":"GO:0060495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"mesothelial-mesenchymal cell signaling involved in early lung development","synonyms":[{"name":"mesothelial-mesenchymal cell signalling involved in early lung development","type":"exact"}],"termid":"GO:0061142"}


id: PBO:0049998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeodomain interacting protein kinase 4","termid":"PBO:0049998"}


id: PBO:0002608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Hca4 (predicted)","termid":"PBO:0002608"}


id: FYPO:0009072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing lysine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0002058","FYPO:0000139"],"is_obsolete":false,"name":"increased cell population growth on lysine nitrogen source","synonyms":[{"name":"increased growth on lysine nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on lysine nitrogen source","type":"exact"}],"termid":"FYPO:0009072"}


id: PBO:0061409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPTN intronic transcript 1","termid":"PBO:0061409"}


id: GO:0002584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antigen processing and presentation of peptide antigen.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation","termid":"GO:0002578"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002583"},{"relation_name":"negatively_regulates","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antigen processing and presentation of peptide antigen","synonyms":[{"name":"down regulation of antigen processing and presentation of peptide antigen","type":"exact"},{"name":"down-regulation of antigen processing and presentation of peptide antigen","type":"exact"},{"name":"downregulation of antigen processing and presentation of peptide antigen","type":"exact"},{"name":"inhibition of antigen processing and presentation of peptide antigen","type":"narrow"},{"name":"negative regulation of peptide antigen processing and presentation","type":"exact"}],"termid":"GO:0002584"}


id: PBO:0034216
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-endoparasite_of","termid":"PBO:0034216"}


id: GO:0051308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which paired chromosomes are physically detached from each other during male meiosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male meiosis chromosome segregation","termid":"GO:0007060"},{"relation_name":"is_a","term_name":"meiotic chromosome separation","termid":"GO:0051307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0140013","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"male meiosis chromosome separation","synonyms":[{"name":"chromosome separation during male meiosis","type":"exact"},{"name":"male meiosis chromosome resolution","type":"exact"}],"termid":"GO:0051308"}


id: PR:O36024
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fta1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O36024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein fta1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.12","synonyms":[{"name":"Spom972h-fta1","type":"exact"},{"name":"sim4 complex subunit fta1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sim4-mal2-associated protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O36024"}


id: GO:0048270
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of methionine adenosyltransferase.","definition_xrefs":["GOC:jid","PMID:10644686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"methionine adenosyltransferase regulator activity","synonyms":[{"name":"MAT regulator activity","type":"exact"}],"termid":"GO:0048270"}


id: PBO:0042251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper chaperone for superoxide dismutase","termid":"PBO:0042251"}


id: PBO:0109814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bcap family homolog, vesicle-mediated transport factor","termid":"PBO:0109814"}


id: GO:0071957
data:
  {"annotated_genes":["SJAG_01082","SJAG_02514","SJAG_03835","SJAG_03508","SJAG_02609","SJAG_04943","SJAG_04558","SJAG_03936","SJAG_05196","SJAG_06270","SJAG_01215","SJAG_03048","SJAG_04140","SJAG_01386","SJAG_04468"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92319,95124,99166,101857,102315,104528,105873,107028,108335,109099,110012,110071,110687,112334,113990],"is_not":false,"summary":null,"term":"GO:0071957"}]},"cv_name":"cellular_component","definition":"The spindle pole body that exists in a cell prior to spindle pole body duplication. An old spindle pole body segregates to the daughter cell upon mitosis, and lacks active proteins involved in signaling exit from mitosis.","definition_xrefs":["GOC:mah","PMID:15132994","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic spindle pole body","termid":"GO:0044732"}],"gene_count":15,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_01215":null,"SJAG_01386":null,"SJAG_02514":null,"SJAG_02609":null,"SJAG_03048":null,"SJAG_03508":null,"SJAG_03835":null,"SJAG_03936":null,"SJAG_04140":null,"SJAG_04468":null,"SJAG_04558":null,"SJAG_04943":null,"SJAG_05196":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005816"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575","GO:0005816"],"is_obsolete":false,"name":"old mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"old SPB","type":"exact"}],"termid":"GO:0071957","terms_by_termid":{"GO:0071957":null}}


id: PBO:0059452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSANTD3-TMEFF1 readthrough","termid":"PBO:0059452"}


id: PR:O14094
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein prune that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01640","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exopolyphosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.11","secondary_identifiers":["UniProtKB:O14094"],"synonyms":[{"name":"ExopolyPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Metaphosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PRUNE","type":"exact"}],"termid":"PR:O14094"}


id: GO:1902969
data:
  {"annotated_genes":["SJAG_02439","SJAG_02182","SJAG_02607","SJAG_04995","SJAG_00573","SJAG_00814","SJAG_03495","SJAG_02199","SJAG_04879","SJAG_05232","SJAG_01762","SJAG_01076","SJAG_01410","SJAG_04190","SJAG_06022","SJAG_01354","SJAG_00729","SJAG_02818","SJAG_01221","SJAG_03898","SJAG_02294","SJAG_03160","SJAG_05239","SJAG_03843","SJAG_00884","SJAG_02162","SJAG_03780","SJAG_02348","SJAG_01068","SJAG_02690","SJAG_00247","SJAG_02992","SJAG_05197","SJAG_04877","SJAG_03695","SJAG_01823","SJAG_04210","SJAG_02074","SJAG_01884","SJAG_02079","SJAG_02172","SJAG_03451","SJAG_01010","SJAG_00198","SJAG_00400","SJAG_04671","SJAG_00863","SJAG_02198","SJAG_00536","SJAG_00618","SJAG_01374","SJAG_01677","SJAG_00327","SJAG_01832","SJAG_02908","SJAG_00272","SJAG_00857","SJAG_04272","SJAG_02667","SJAG_04341","SJAG_01210","SJAG_04183","SJAG_02822","SJAG_03048","SJAG_00874"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105916],"is_not":false,"summary":null,"term":"GO:1902969"},{"annotations":[93444,114904,102326,89051,94718,112005,108596,112649,109440,103725,106839,111766,104422,94752,106471,113062],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902983"},{"annotations":[105917,110050,92469,106840,98859,106736,91446,112650,94036,110877,109714,114906,114604,98922,114775,116835,96921],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902975"},{"annotations":[104424,94720,102328,103729,108598,117683],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903459"},{"annotations":[89052,94753,93446,103730,106841,94721,106472,104425],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903460"},{"annotations":[111250,108614],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990505"},{"annotations":[89925,98923,110051],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902977"},{"annotations":[110052,114517,102823],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902985"},{"annotations":[112007,98564,107220,95664,88644,94312,108570,95500,98449,109048,90433,97746,116299,107244,94555],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990426"},{"annotations":[108378,116345],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903464"},{"annotations":[101871,97263,108379],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903467"},{"annotations":[94541,100108,92044,92133,101001,100144,103655],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903461"},{"annotations":[102824,111529,116773],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903468"},{"annotations":[101881],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903465"},{"annotations":[87779,102448,103656,112008],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903469"}]},"cv_name":"biological_process","definition":"Any nuclear DNA replication that is involved in a mitotic cell cycle.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA replication","termid":"GO:0033260"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"}],"gene_count":65,"genes_by_uniquename":{"SJAG_00198":null,"SJAG_00247":null,"SJAG_00272":null,"SJAG_00327":null,"SJAG_00400":null,"SJAG_00536":null,"SJAG_00573":null,"SJAG_00618":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00857":null,"SJAG_00863":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_01010":null,"SJAG_01068":null,"SJAG_01076":null,"SJAG_01210":null,"SJAG_01221":null,"SJAG_01354":null,"SJAG_01374":null,"SJAG_01410":null,"SJAG_01677":null,"SJAG_01762":null,"SJAG_01823":null,"SJAG_01832":null,"SJAG_01884":null,"SJAG_02074":null,"SJAG_02079":null,"SJAG_02162":null,"SJAG_02172":null,"SJAG_02182":null,"SJAG_02198":null,"SJAG_02199":null,"SJAG_02294":null,"SJAG_02348":null,"SJAG_02439":null,"SJAG_02607":null,"SJAG_02667":null,"SJAG_02690":null,"SJAG_02818":null,"SJAG_02822":null,"SJAG_02908":null,"SJAG_02992":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03451":null,"SJAG_03495":null,"SJAG_03695":null,"SJAG_03780":null,"SJAG_03843":null,"SJAG_03898":null,"SJAG_04183":null,"SJAG_04190":null,"SJAG_04210":null,"SJAG_04272":null,"SJAG_04341":null,"SJAG_04671":null,"SJAG_04877":null,"SJAG_04879":null,"SJAG_04995":null,"SJAG_05197":null,"SJAG_05232":null,"SJAG_05239":null,"SJAG_06022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0007049","GO:0008150","GO:0006260"],"is_obsolete":false,"name":"mitotic DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"mitotic cell cycle DNA replication","type":"exact"},{"name":"mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"}],"termid":"GO:1902969","terms_by_termid":{"GO:1902969":null,"GO:1902975":null,"GO:1902977":null,"GO:1902983":null,"GO:1902985":null,"GO:1903459":null,"GO:1903460":null,"GO:1903461":null,"GO:1903464":null,"GO:1903465":null,"GO:1903467":null,"GO:1903468":null,"GO:1903469":null,"GO:1990426":null,"GO:1990505":null}}


id: GO:0010372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of gibberellins.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gibberellin biosynthetic process","termid":"GO:0010371"},{"relation_name":"is_a","term_name":"positive regulation of isoprenoid metabolic process","termid":"GO:0045828"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"gibberellin biosynthetic process","termid":"GO:0009686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629","GO:0019748"],"is_obsolete":false,"name":"positive regulation of gibberellin biosynthetic process","synonyms":[{"name":"positive regulation of gibberellic acid biosynthetic process","type":"narrow"}],"termid":"GO:0010372"}


id: MONDO:1011259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinitis pigmentosa that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa, non-human animal","termid":"MONDO:1010334"},{"relation_name":"is_a","term_name":"retinal degeneration, cattle","termid":"MONDO:1011247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinitis pigmentosa, cattle","secondary_identifiers":["OMIA:001413-9913"],"termid":"MONDO:1011259","xrefs":{"Monarch":{"xref_id":"1011259"}}}


id: PBO:0082140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Activator of Cbk1p kinase; component of the RAM signaling network that regulates cellular polarity and morphogenesis; activation of Cbk1p facilitates the Ace2p-dependent daughter cell-specific transcription of genes involved in cell separation; similar to Mob1p","termid":"PBO:0082140"}


id: PBO:0114430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR550A3 host gene","termid":"PBO:0114430"}


id: PBO:0075705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT-ROBO Rho GTPase activating protein 1","termid":"PBO:0075705"}


id: GO:0000968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNA exon ligation process that rejoins two exons of a pre-tRNA which has had the intron removed.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA exon ligation","termid":"GO:0000378"},{"relation_name":"part_of","term_name":"tRNA splicing, via endonucleolytic cleavage and ligation","termid":"GO:0006388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"tRNA exon ligation","termid":"GO:0000968"}


id: PBO:0075880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3GAL5 pseudogene 1","termid":"PBO:0075880"}


id: MONDO:0006854
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A term describing a soft tissue tumor which consists of two or more mesenchymal lines of differentiation, excluding a fibroblastic line of differentiation.","definition_xrefs":["NCIT:C3233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesenchymoma","secondary_identifiers":["EFO:1001042","ICDO:8990/1","MEDGEN:7553","DOID:2668","MESH:D008637","UMLS:C0025464"],"synonyms":[{"name":"mesenchymoma","type":"exact"}],"termid":"MONDO:0006854","xrefs":{"Monarch":{"xref_id":"0006854"}}}


id: PATO:0000115
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000115 absolute temperature sensitivity (obsolete PATO:0000115)","termid":"PATO:0000115"}


id: PBO:0049629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 32","termid":"PBO:0049629"}


id: PBO:0030224
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_pole_body_morphology_during_vegetative_growth","termid":"PBO:0030224"}


id: PBO:0017034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase, RIO family Rio2 (predicted)","termid":"PBO:0017034"}


id: MONDO:0859147
data:
  {"annotated_genes":["SJAG_01745"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86005],"is_not":false,"summary":null,"term":"MONDO:0859147"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"progeroid syndrome","termid":"MONDO:0015333"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"Marbach-Rustad progeroid syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1784907","Orphanet:659873","OMIM:619322","UMLS:C5543388"],"termid":"MONDO:0859147","terms_by_termid":{"MONDO:0859147":null},"xrefs":{"Monarch":{"xref_id":"0859147"}}}


id: FYPO:0007850
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which microtubules self-assemble into a spindle without the participation of the spindle pole body (SPB) during the second meiotic nuclear division.","definition_xrefs":["PMID:34346498","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle assembly during meiosis II","termid":"FYPO:0004510"},{"relation_name":"is_a","term_name":"meiotic spindle self-assembly","termid":"FYPO:0007848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000054","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"spindle self-assembly during meiosis II","synonyms":[{"name":"SPB-independent meiosis II spindle assembly","type":"exact"},{"name":"SPB-independent spindle assembly during meiosis II","type":"exact"},{"name":"acentrosomal meiotic spindle assembly","type":"related"},{"name":"acentrosomal spindle assembly during meiosis II","type":"related"},{"name":"meiosis II spindle self-assembly","type":"exact"},{"name":"meiotic SPB-independent spindle in meiosis II","type":"related"},{"name":"spindle pole body-independent meiosis II spindle assembly","type":"exact"},{"name":"spindle pole body-independent spindle assembly during meiosis II","type":"exact"},{"name":"spindle self-assembly during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0007850"}


id: PBO:0067783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 85","termid":"PBO:0067783"}


id: MONDO:0009780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lethal omphalocele-cleft palate syndrome is characterized by the association of omphalocele and cleft palate. It has been described in three daughters of normal unrelated parents. They were all diagnosed at birth. One had omphalocele, posterior cleft palate, and uterus bicornuatus; she died at 2 months. The second had omphalocele, cleft uvula, and hydrocephalus and died at 4 months; the third had omphalocele and cleft palate and died at 1 year. This syndrome is likely to be inherited as an autosomal recessive condition.","definition_xrefs":["Orphanet:2736"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal omphalocele-cleft palate syndrome","secondary_identifiers":["OMIM:258320","MEDGEN:376757","MESH:C537747","SCTID:719408007","GARD:4079","UMLS:C1850317"],"synonyms":[{"name":"Czeizel syndrome","type":"exact"},{"name":"cleft palate-omphalocele syndrome, lethal","type":"related"},{"name":"omphalocele cleft palate syndrome lethal","type":"related"},{"name":"omphalocele-cleft palate syndrome, lethal","type":"related"}],"termid":"MONDO:0009780","xrefs":{"Monarch":{"xref_id":"0009780"}}}


id: PR:Q9P6L5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- end4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6L5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocytosis protein end4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.11","synonyms":[{"name":"SLA2 protein homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-end4","type":"exact"}],"termid":"PR:Q9P6L5"}


id: PR:O43053
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12413:SF0","PRO:DNx","OMA:SCHPO04028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC342.01c","secondary_identifiers":["UniProtKB:O43053"],"synonyms":[{"name":"Dol-P-Glc:Man(9)GlcNAc(2)-PP-Dol alpha-1,3-glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ALG6","type":"exact"},{"name":"asparagine-linked glycosylation protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"dolichyl-P-Glc:Man9GlcNAc2-PP-dolichyl glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43053"}


id: GO:0014841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of satellite cells, resulting in the expansion of the cell population. Satellite cells are quiescent cells that are located between the basal lamina and the plasmalemma of the muscle fiber, which are the main contributors to postnatal muscle growth. In adult muscle, satellite cells become activated to divide and differentiate in response to muscle damage.","definition_xrefs":["GOC:mtg_muscle","PMID:16607119","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle cell proliferation","termid":"GO:0014856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle satellite cell proliferation","termid":"GO:0014841"}


id: GO:0072344
data:
  {"annotated_genes":["SJAG_01074","SJAG_05000","SJAG_03428","SJAG_00188","SJAG_00898","SJAG_02746","SJAG_03189","SJAG_02096","SJAG_01497"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87393,91354,98948,102631,105133,106357,113495,115586],"is_not":false,"summary":null,"term":"GO:0072344"},{"annotations":[113902],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140708"}]},"cv_name":"biological_process","definition":"A process of translational elongation that takes place when a ribosome has stalled during translation, and results in freeing the ribosome from the stalled translation complex.","definition_xrefs":["GOC:mah","PMID:20185543","PMID:19170872","PMID:20117091","PMID:18557701","GOC:jh2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational elongation","termid":"GO:0006414"},{"relation_name":"is_a","term_name":"ribosome disassembly","termid":"GO:0032790"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00188":null,"SJAG_00898":null,"SJAG_01074":null,"SJAG_01497":null,"SJAG_02096":null,"SJAG_02746":null,"SJAG_03189":null,"SJAG_03428":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"rescue of stalled ribosome","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0072344","terms_by_termid":{"GO:0072344":null,"GO:0140708":null}}


id: PBO:0069316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 574, pseudogene","termid":"PBO:0069316"}


id: FYPO:0002572
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of dTTP measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular pentose phosphate level","termid":"FYPO:0006705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular dTTP level","synonyms":[{"name":"decreased cellular dTTP level during mitotic cell cycle","type":"related"},{"name":"decreased cellular dTTP level during vegetative growth","type":"exact"},{"name":"reduced cellular dTTP level","type":"exact"}],"termid":"FYPO:0002572"}


id: PBO:0055144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2563","termid":"PBO:0055144"}


id: PBO:0069851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1137, pseudogene","termid":"PBO:0069851"}


id: MONDO:0957460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal perforation","termid":"MONDO:0006807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"spontaneous intestinal perforation","secondary_identifiers":["icd11.foundation:1355081169","MEDGEN:856598","Orphanet:645793","UMLS:C3897004"],"termid":"MONDO:0957460","xrefs":{"Monarch":{"xref_id":"0957460"}}}


id: PR:O59786
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ferrochelatase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04207","PANTHER:PTHR11108:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferrochelatase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC320.09","secondary_identifiers":["UniProtKB:O59786"],"synonyms":[{"name":"Spom972h-FECH","type":"exact"},{"name":"heme synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"protoheme ferro-lyase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59786"}


id: GO:0006025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of galactosaminoglycans, any of a group of polysaccharides that contain amino sugars derived from the galactose.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete galactosaminoglycan biosynthetic process (obsolete GO:0006025)","synonyms":[{"name":"galactosaminoglycan anabolism","type":"exact"},{"name":"galactosaminoglycan biosynthesis","type":"exact"},{"name":"galactosaminoglycan formation","type":"exact"},{"name":"galactosaminoglycan synthesis","type":"exact"}],"termid":"GO:0006025"}


id: MONDO:0005858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive adenocarcinoma characterized by cystic changes and the presence of malignant glandular cells which contain intracytoplasmic mucin. It may arise from the ovary, pancreas, appendix, and lung.","definition_xrefs":["NCIT:C3776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucinous adenocarcinoma","termid":"MONDO:0004957"},{"relation_name":"is_a","term_name":"cystadenocarcinoma","termid":"MONDO:0005596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mucinous cystadenocarcinoma","secondary_identifiers":["MEDGEN:60211","EFO:0007378","DOID:3603","ICDO:8470/3","MESH:D018282","UMLS:C0206699"],"synonyms":[{"name":"Pseudomucinous adenocarcinoma","type":"exact"},{"name":"Pseudomucinous cystadenocarcinoma","type":"exact"},{"name":"mucinous cystadenocarcinoma","type":"exact"},{"name":"mucinous cystadenocarcinoma (morphologic abnormality)","type":"exact"},{"name":"mucinous cystadenocarcinoma NOS (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0005858","xrefs":{"Monarch":{"xref_id":"0005858"}}}


id: MONDO:0800402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited retinopathy caused by bi-allelic variants in the TRPM1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"TRPM1-related retinopathy","termid":"MONDO:0800402","xrefs":{"Monarch":{"xref_id":"0800402"}}}


id: PBO:0062138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 5","termid":"PBO:0062138"}


id: GO:0071525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyrrolysine, N6-{[(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-yl]carbonyl}-L-lysine.","definition_xrefs":["GOC:mah","PMID:17204561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"proteinogenic amino acid metabolic process","termid":"GO:0170039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"pyrrolysine metabolic process","synonyms":[{"name":"monomethylamine methyltransferase cofactor lysine adduct metabolic process","type":"exact"},{"name":"pyrrolysine metabolism","type":"exact"}],"termid":"GO:0071525"}


id: MONDO:0014995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia, seizures, and absent language","secondary_identifiers":["OMIM:617268","UMLS:C4310643","MEDGEN:934610"],"synonyms":[{"name":"NDHSAL","type":"exact"},{"name":"neurodevelopmental disorder with hypotonia, seizures, and absent language","type":"exact"},{"name":"neurodevelopmental disorder with hypotonia, seizures, and absent language; NDHSAL","type":"exact"}],"termid":"MONDO:0014995","xrefs":{"Monarch":{"xref_id":"0014995"}}}


id: GO:0048196
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The matrix external to the plant plasma membrane, composed of the cell wall and middle lamella.","definition_xrefs":["GOC:mtg_sensu","PMID:11351084","GOC:jid","PMID:4327466"],"gene_count":0,"genotype_count":0,"name":"obsolete plant extracellular matrix (obsolete GO:0048196)","synonyms":[{"name":"middle lamella-containing extracellular matrix","type":"related"},{"name":"plant extracellular matrix","type":"exact"}],"termid":"GO:0048196"}


id: PR:P23635
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppa1 gene.","definition_xrefs":["UniProtKB:P23635","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minor serine/threonine-protein phosphatase PP2A-1 catalytic subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.15","synonyms":[{"name":"Spom972h-ppa1","type":"exact"}],"termid":"PR:P23635"}


id: PBO:0086298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in the ubiquitin-proteasome pathway; interacts with ubiquitinated protein, Cdc48p and the proteasomal regulatory particle; may protect cells from trivalent metalloid induced proteotoxicity; contains a PACE promoter element and is co-regulated with proteasome subunit genes; AN1-type zinc finger protein, with DHHC and ubiquitin-like domains (UBL); ortholog of ZFAND1, a human gene linked to cancer; protein abundance increases under DNA replication stress","termid":"PBO:0086298"}


id: MONDO:0017728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Tay-Sachs disease","termid":"MONDO:0010100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005328","MONDO:0002525","MONDO:0002039","MONDO:0005066","MONDO:0005559","MONDO:0002561"],"is_obsolete":false,"name":"Tay-Sachs disease, B1 variant","secondary_identifiers":["SCTID:238024005","GARD:21327","Orphanet:309239","MEDGEN:336452","UMLS:C1848916"],"synonyms":[{"name":"GM2 gangliosidosis, B1 variant","type":"exact"},{"name":"hexosaminidase A deficiency, B1 variant","type":"exact"}],"termid":"MONDO:0017728","xrefs":{"Monarch":{"xref_id":"0017728"}}}


id: PBO:0044036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate proteoglycan 4 pseudogene 5","termid":"PBO:0044036"}


id: PBO:0039949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ariadne RBR E3 ubiquitin protein ligase 2","termid":"PBO:0039949"}


id: PBO:0057793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3118-2","termid":"PBO:0057793"}


id: PBO:0005291
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains CuSE","termid":"PBO:0005291"}


id: GO:0004442
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: D-myo-inositol 1,3-bisphosphate + H2O = D-myo-inositol 1-monophosphate + phosphate.","definition_xrefs":["EC:3.1.3.65","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol-1,4,-bisphosphate 3-phosphatase (obsolete GO:0004442)","synonyms":[{"name":"inositol-1,4,-bisphosphate 3-phosphatase","type":"exact"}],"termid":"GO:0004442"}


id: PBO:0051876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isochorismatase domain containing 1","termid":"PBO:0051876"}


id: PBO:0080856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YES proto-oncogene 1, Src family tyrosine kinase","termid":"PBO:0080856"}


id: PBO:0048494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCSH pseudogene 6","termid":"PBO:0048494"}


id: MONDO:0010025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature-obesity syndrome","secondary_identifiers":["MESH:C564821","OMIM:269870","UMLS:C1849235","MEDGEN:341410"],"synonyms":[{"name":"SSOS","type":"related"},{"name":"short stature-obesity syndrome","type":"exact"}],"termid":"MONDO:0010025","xrefs":{"Monarch":{"xref_id":"0010025"}}}


id: GO:0070101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of a chemokine-mediated signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"positive regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045745"},{"relation_name":"is_a","term_name":"regulation of chemokine-mediated signaling pathway","termid":"GO:0070099"},{"relation_name":"positively_regulates","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of chemokine-mediated signaling pathway","synonyms":[{"name":"positive regulation of chemokine-mediated signalling pathway","type":"exact"}],"termid":"GO:0070101"}


id: MONDO:0015124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare adrenal disease (obsolete MONDO:0015124)","secondary_identifiers":["Orphanet:101954"],"termid":"MONDO:0015124","xrefs":{"Monarch":{"xref_id":"0015124"}}}


id: GO:0030691
data:
  {"annotated_genes":["SJAG_01494","SJAG_04346","SJAG_00311"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87409,91492,111924],"is_not":false,"summary":null,"term":"GO:0030691"}]},"cv_name":"cellular_component","definition":"A heterodimer associated with 66S preribosomes; predominantly nucleoplasmic, but also locates to the nucleolus; involved in ribosomal large subunit biogenesis.","definition_xrefs":["PMID:12446671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Noc complex","termid":"GO:0030689"},{"relation_name":"part_of","term_name":"preribosome, large subunit precursor","termid":"GO:0030687"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00311":null,"SJAG_01494":null,"SJAG_04346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0030684"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575","GO:0030684"],"is_obsolete":false,"name":"Noc2p-Noc3p complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030691","terms_by_termid":{"GO:0030691":null}}


id: PBO:0081122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger C3H1-type containing","termid":"PBO:0081122"}


id: MOD:00155
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to L-3',4'-dihydroxyphenylalanine.","definition_xrefs":["OMSSA:194","RESID:AA0146","Unimod:35#Y","OMSSA:64","ChEBI:141815","DeltaMass:0","PubMed:1610822","PubMed:1903612","PubMed:3734192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated residue","termid":"MOD:00425"},{"relation_name":"is_a","term_name":"hydroxylated tyrosine","termid":"MOD:00707"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3',4'-dihydroxyphenylalanine","synonyms":[{"name":"(2S)-2-amino-3-(3,4-dihydroxyphenyl)propanoic acid","type":"exact"},{"name":"3,4-Dihydroxy-Phenylalanine (from Tyrosine) (DOPA)","type":"exact"},{"name":"3HyTyr","type":"exact"},{"name":"L-3',4'-dihydroxyphenylalanine","type":"exact"},{"name":"L-3'-hydroxytyrosine","type":"exact"},{"name":"L-DOPA","type":"exact"},{"name":"MOD_RES 3',4'-dihydroxyphenylalanine","type":"exact"},{"name":"hydroxylationy","type":"exact"},{"name":"levodopa","type":"exact"},{"name":"mod194","type":"exact"}],"termid":"MOD:00155"}


id: PBO:0063946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTEN induced kinase 1","termid":"PBO:0063946"}


id: GO:0018205
data:
  {"annotated_genes":["SJAG_02503","SJAG_01776","SJAG_03843","SJAG_00604","SJAG_00727","SJAG_05032","SJAG_02082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103977,89229,109049,114143,89072,97248,95693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016925"}]},"cv_name":"biological_process","definition":"The modification of peptidyl-lysine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00604":null,"SJAG_00727":null,"SJAG_01776":null,"SJAG_02082":null,"SJAG_02503":null,"SJAG_03843":null,"SJAG_05032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine modification","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0018205","terms_by_termid":{"GO:0016925":null}}


id: MONDO:0016661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infantile onset panniculitis with uveitis and systemic granulomatosis","secondary_identifiers":["GARD:20694","UMLS:C4750785","icd11.foundation:1145994427","Orphanet:251304","MEDGEN:1670295"],"termid":"MONDO:0016661","xrefs":{"Monarch":{"xref_id":"0016661"}}}


id: MONDO:0013308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"CBL-related disorder is a genetic condition caused by pathogenic variants in the Cbl ubiquitin ligase gene, (CBL; HGNC:1541). Due to the proposed mechanism indicating the CBL gene's relationship to the RAS-MAPK pathway and the phenotypic presentation similar to that of the RASopathies, CBL-related disorder should be considered a RASopathy disorder. Though there is a wide spectrum of phenotypic variability, broadly, patients with CBL-related disorder have presented with developmental delay, intellectual disability, neurodevelopmental alterations, prenatal lymphatic anomalies, cardiac malformations as well as vascular anomalies particularly affecting the brain (e.g. Moya-moya arteriopathies), craniofacial features indicative of a RASopathy, hypotonia, feeding difficulties, edema of the legs, musculoskeletal and respiratory thorax abnormalities, ectodermal features including cafe-au-lait spots, immunological and hematological disorders and susceptibility to tumors diagnosed as juvenile myelomonocytic leukemia (JMML) that is usually self-remitting. Note tumor risk beyond JMML has not yet been thoroughly assessed. Due to the clinical presentation of a broad spectrum of these and other phenotypes in patients with variants in CBL, these conditions are currently defined by experts in reference to the causal gene, CBL.","definition_xrefs":["PMID:28414188","PMID:25283271","PMID:28343148","PMID:25952305","PMID:24458550","PMID:26911351","PMID:28589114","PMID:25358541","PMID:20619386","PMID:29259247","PMID:21901340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RASopathy","termid":"MONDO:0021060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBL-related disorder","secondary_identifiers":["MEDGEN:462153","OMIM:613563","Orphanet:363972","UMLS:C3150803","GARD:17577"],"synonyms":[{"name":"CBL-related disorder","type":"exact"},{"name":"Cbl mutation-associated syndrome","type":"related"},{"name":"Cbl syndrome","type":"exact"},{"name":"NSLL","type":"related"},{"name":"Noonan syndrome-like disorder with JMML","type":"exact"},{"name":"Noonan syndrome-like disorder with juvenile myelomonocytic leukaemia","type":"exact"},{"name":"Noonan syndrome-like disorder with juvenile myelomonocytic leukemia","type":"exact"},{"name":"Noonan syndrome-like disorder with or without juvenile myelomonocytic leukaemia","type":"related"},{"name":"Noonan syndrome-like disorder with or without juvenile myelomonocytic leukemia","type":"related"},{"name":"Noonan-like syndrome","type":"exact"}],"termid":"MONDO:0013308","xrefs":{"Monarch":{"xref_id":"0013308"}}}


id: FYPO:0005862
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which MTREC complex binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:26942678","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abolished MTREC complex binding","synonyms":[{"name":"MTREC complex binding abolished","type":"exact"},{"name":"abolished NURS complex binding","type":"exact"}],"termid":"FYPO:0005862"}


id: GO:0060076
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse in which an action potential in the presynaptic cell increases the probability of an action potential occurring in the postsynaptic cell.","definition_xrefs":["GOC:dph","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"excitatory synapse","secondary_identifiers":["Wikipedia:Excitatory_synapse"],"termid":"GO:0060076"}


id: RO:0002241
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A broad relationship between an exposure event or process and any agent, stimulus, activity, or event that causes stress or tension on an organism and interacts with an exposure receptor during an exposure event.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_exposure_stimulus","termid":"RO:0002309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_exposure_stressor","termid":"RO:0002241"}


id: GO:0061915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an actin fusion focus are transported to, or maintained in, a specific location. The actin fusion focus is an aster-like, F-actin-containing structure at the mating projection tip where the cell wall is degraded during conjugation with cellular fusion.","definition_xrefs":["PMID:28410370"],"gene_count":0,"genotype_count":0,"name":"obsolete actin fusion focus localization (obsolete GO:0061915)","synonyms":[{"name":"actin fusion focus localisation","type":"exact"}],"termid":"GO:0061915"}


id: RO:0002327
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"capable_of","termid":"RO:0002215"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enables","termid":"RO:0002327"}


id: GO:0034491
data:
  {"annotated_genes":["SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090516"}]},"cv_name":"biological_process","definition":"The directed movement of neutral amino acids into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"amino acid transmembrane import into vacuole","termid":"GO:0032975"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"neutral amino acid transmembrane import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034491","terms_by_termid":{"GO:0090516":null}}


id: PR:O94612
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cyclin-related protein FAM58A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized cyclin-L1-like protein C1296.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1296.05c","secondary_identifiers":["UniProtKB:O94612"],"synonyms":[{"name":"Spom972h-FAM58A","type":"exact"}],"termid":"PR:O94612"}


id: GO:0046726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process where the infecting virus increases the levels of viral proteins in a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation by virus of viral protein levels in host cell","termid":"GO:0046719"},{"relation_name":"is_a","term_name":"positive regulation of viral process","termid":"GO:0048524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation by virus of viral protein levels in host cell","synonyms":[{"name":"activation of viral protein levels in host cell","type":"narrow"},{"name":"positive regulation of viral protein levels","type":"exact"},{"name":"stimulation of viral protein levels in host cell","type":"narrow"},{"name":"up regulation of viral protein levels in host cell","type":"exact"},{"name":"up-regulation of viral protein levels in host cell","type":"exact"},{"name":"upregulation of viral protein levels in host cell","type":"exact"}],"termid":"GO:0046726"}


id: PBO:0045429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dpy-19 like C-mannosyltransferase 1","termid":"PBO:0045429"}


id: PBO:0045139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal assembly factor 8","termid":"PBO:0045139"}


id: GO:0019403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of galactitol, the hexitol derived by the reduction of the aldehyde group of either D- or L-galactose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactitol metabolic process","termid":"GO:0019402"},{"relation_name":"is_a","term_name":"hexitol biosynthetic process","termid":"GO:0019406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"galactitol biosynthetic process","synonyms":[{"name":"galactitol anabolism","type":"exact"},{"name":"galactitol biosynthesis","type":"exact"},{"name":"galactitol formation","type":"exact"},{"name":"galactitol synthesis","type":"exact"}],"termid":"GO:0019403"}


id: GO:0098910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in an atrial cardiac muscle cell contributing to the regulation of its contraction. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell contraction","termid":"GO:0086004"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell action potential","termid":"GO:0098901"},{"relation_name":"is_a","term_name":"regulation of cardiac conduction","termid":"GO:1903779"},{"relation_name":"regulates","term_name":"atrial cardiac muscle cell action potential","termid":"GO:0086014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of atrial cardiac muscle cell action potential","termid":"GO:0098910"}


id: GO:0071308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a menaquinone (vitamin K2) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to menaquinone","termid":"GO:0032572"},{"relation_name":"is_a","term_name":"cellular response to vitamin K","termid":"GO:0071307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to menaquinone","synonyms":[{"name":"cellular response to menatetrenone","type":"exact"},{"name":"cellular response to vitamin K2","type":"exact"}],"termid":"GO:0071308"}


id: PBO:0059784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 10","termid":"PBO:0059784"}


id: PBO:0066065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor associated protein of the synapse","termid":"PBO:0066065"}


id: PBO:0071984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 13","termid":"PBO:0071984"}


id: GO:0048223
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Network composed of hemicelluloses; members of a class of plant cell wall polysaccharide that cannot be extracted from the wall by hot water or chelating agents, but can be extracted by aqueous alkali. Includes xylan, glucuronoxylan, arabinoxylan, arabinogalactan II, glucomannan, xyloglucan and galactomannan.","definition_xrefs":["GOC:jid","DOI:10.1016/j.foodchem.2008.11.065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"primary cell wall","termid":"GO:0009530"},{"relation_name":"part_of","term_name":"secondary cell wall","termid":"GO:0009531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"hemicellulose network","termid":"GO:0048223"}


id: PBO:0041449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 9 open reading frame 153","termid":"PBO:0041449"}


id: GO:0102888
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = delta-cuprenene + diphosphoric acid.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete delta-cuprenene synthase activity (obsolete GO:0102888)","termid":"GO:0102888"}


id: MOD:00823
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-methionine residue and an L-cysteine residue by a thioester bond to form S-(L-methionyl)-L-cysteine.","definition_xrefs":["RESID:AA0413","PubMed:12146974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioester crosslinked residues","termid":"MOD:00395"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-methionine residue","termid":"MOD:02052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(L-methionyl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2S)-2-amino-4-(methylsulfanyl)butanoyl]sulfanyl)propanoic acid","type":"exact"},{"name":"CROSSLNK Methionyl cysteine thioester (Cys-Met)","type":"exact"},{"name":"S-(2-amino-4-methylthiobutanoyl)cysteine","type":"exact"},{"name":"S-(L-methionyl)-L-cysteine","type":"exact"},{"name":"XLNK1MetSCys","type":"exact"},{"name":"methionine cysteine thioester","type":"exact"}],"termid":"MOD:00823"}


id: PBO:0046256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator acetyltransferase complex subunit 5","termid":"PBO:0046256"}


id: PBO:0041421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 open reading frame 33","termid":"PBO:0041421"}


id: GO:0019277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UDP-N-acetylgalactosamine, a substance composed of N-acetylgalactosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"UDP-N-acetylgalactosamine metabolic process","termid":"GO:0019276"},{"relation_name":"is_a","term_name":"amino sugar biosynthetic process","termid":"GO:0046349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"UDP-N-acetylgalactosamine biosynthetic process","synonyms":[{"name":"UDP-N-acetylgalactosamine anabolism","type":"exact"},{"name":"UDP-N-acetylgalactosamine biosynthesis","type":"exact"},{"name":"UDP-N-acetylgalactosamine formation","type":"exact"},{"name":"UDP-N-acetylgalactosamine synthesis","type":"exact"}],"termid":"GO:0019277"}


id: MONDO:0000411
data:
  {"annotated_genes":["SJAG_01653","SJAG_02384","SJAG_02848","SJAG_04038","SJAG_03042","SJAG_04351","SJAG_00760","SJAG_03657","SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85441,85440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014150"},{"annotations":[86515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013389"},{"annotations":[84691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012245"},{"annotations":[84754,84755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014598"},{"annotations":[85620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014895"},{"annotations":[86689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013322"},{"annotations":[85884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054846"}]},"cv_name":"mondo","definition":"An epilepsy syndrome that is a group of clinical entities showing a cluster of electro-clinical characteristics, classified according to age at onset, cognitive and developmental antecedents and consequences, motor and sensory examinations, EEG features, provoking or triggering factors, and patterns of seizure occurrence with respect to sleep.","definition_xrefs":["DOID:0050701","PMID:20196795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy","termid":"MONDO:0005027"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00321":null,"SJAG_00760":null,"SJAG_01653":null,"SJAG_02384":null,"SJAG_02848":null,"SJAG_03042":null,"SJAG_03657":null,"SJAG_04038":null,"SJAG_04351":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"electroclinical syndrome","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"electro-clinical syndrome","type":"exact"}],"termid":"MONDO:0000411","terms_by_termid":{"MONDO:0012245":null,"MONDO:0013322":null,"MONDO:0013389":null,"MONDO:0014150":null,"MONDO:0014598":null,"MONDO:0014895":null,"MONDO:0054846":null},"xrefs":{"Monarch":{"xref_id":"0000411"}}}


id: PBO:0064023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 57","termid":"PBO:0064023"}


id: GO:0102749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + dihydrogeranylgeranyl-chlorophyll a + NADPH = tetrahydrogeranylgeranyl-chlorophyll a + NADP.","definition_xrefs":["GOC:pz","EC:1.3.1.-"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydrogeranylgeranyl-chlorophyll a reductase activity (obsolete GO:0102749)","termid":"GO:0102749"}


id: PBO:0083833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Eukaryotic initiation factor eIF2A; associates specifically with both 40S subunits and 80 S ribosomes, and interacts genetically with both eIF5b and eIF4E; homologous to mammalian eIF2A","termid":"PBO:0083833"}


id: GO:0002381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of immunoglobulin due to biosynthesis or secretion following a cellular stimulus during an immune response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:9185563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin production","termid":"GO:0002377"},{"relation_name":"part_of","term_name":"immunoglobulin mediated immune response","termid":"GO:0016064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"immunoglobulin production involved in immunoglobulin-mediated immune response","secondary_identifiers":["GO:0002379","GO:0002380"],"synonyms":[{"name":"antibody production during immune response","type":"related"},{"name":"antibody secretion during immune response","type":"related"},{"name":"immunoglobulin biosynthetic process involved in immune response","type":"narrow"},{"name":"immunoglobulin production during immune response","type":"related"},{"name":"immunoglobulin production involved in immune response","type":"related"},{"name":"immunoglobulin production involved in immunoglobulin mediated immune response","type":"exact"},{"name":"immunoglobulin secretion involved in immune response","type":"narrow"}],"termid":"GO:0002381"}


id: PBO:0113374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative AMP hydrolase; secreted protein proposed to function as an adenosine monophosphatase in NAD+ degradation, via nucleoside salvage pathway that converts NAD+ to AMP and adenosine; overexpression results in adenosine accumulation and reduced levels of NAD+, deletion results in increased NAD+ and NADH; targeted to vacuole via Vps10p-dependent endosomal vacuolar protein sorting pathway; similar to human NT5E/CD73 gene involved in cancer progression","termid":"PBO:0113374"}


id: PBO:0071650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 14","termid":"PBO:0071650"}


id: PBO:0059739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 13","termid":"PBO:0059739"}


id: FYPO:0001812
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 5-phosphoribosyl diphosphate measured in a cell is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"altered 5-phosphoribosyl diphosphate level","termid":"FYPO:0001811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased 5-phosphoribosyl diphosphate level","synonyms":[{"name":"increased 5-O-phosphono-alpha-D-ribofuranosyl diphosphate level","type":"exact"},{"name":"increased 5-phosphoribosyl diphosphate accumulation","type":"related"},{"name":"increased 5-phosphoribosyl diphosphate level during mitotic cell cycle","type":"related"},{"name":"increased 5-phosphoribosyl diphosphate level during vegetative growth","type":"exact"},{"name":"increased cellular 5-phosphoribosyl diphosphate level","type":"exact"}],"termid":"FYPO:0001812"}


id: MONDO:1012676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary chondrodysplasia that occurs in sheep due to a mutation in the SLC13A1 gene.","definition_xrefs":["PMID:22742499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia, non-human animal","termid":"MONDO:1010306"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondrodysplasia, SLC13A1-related, sheep","secondary_identifiers":["OMIA:001400-9940"],"termid":"MONDO:1012676","xrefs":{"Monarch":{"xref_id":"1012676"}}}


id: GO:0062109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of DNA recombinase disassembly, the disaggregation of a DNA recombinase complex into its constituent components.","definition_xrefs":["PMID:30297419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex disassembly","termid":"GO:0043244"},{"relation_name":"regulates","term_name":"DNA recombinase disassembly","termid":"GO:1990986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of DNA recombinase disassembly","termid":"GO:0062109"}


id: GO:0036147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A digestive process in which food, usually grass or hay, is swallowed into a multi-compartmented stomach, regurgitated, chewed again, and swallowed again.","definition_xrefs":["Wikipedia:Rumination","GOC:maf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system process","termid":"GO:0022600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rumination","synonyms":[{"name":"digestive rumination","type":"exact"}],"termid":"GO:0036147"}


id: GO:0106126
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a reservosome.","definition_xrefs":["PMID:12204365","PMID:15521631","PMID:19288526","PMID:22425988","PMID:18452191","PMID:21818313","GOC:ach"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"reservosome","termid":"GO:0106123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005773","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"reservosome membrane","termid":"GO:0106126"}


id: GO:0061898
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-retinoic acid + 2 H+ + O2 + 2 reduced [adrenodoxin] = all-trans-3,4-didehydro retinoic acid + 2 H2O + 2 oxidized [adrenodoxin].","definition_xrefs":["PMID:27059013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"all-trans retinoic acid 3,4-desaturase activity","termid":"GO:0061898"}


id: PBO:0038838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 8","termid":"PBO:0038838"}


id: MONDO:0019179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Interstitial 9q22.3 microdeletion is associated with a phenotype including macrocephaly, overgrowth and trigonocephaly. Psychomotor delay, hyperactivity and distinctive facial features were also observed. It has been described in two unrelated children.","definition_xrefs":["Orphanet:77301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial monosomy of the long arm of chromosome 9","termid":"MONDO:0016908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monosomy 9q22.3","secondary_identifiers":["SCTID:724098008","GARD:18934","MEDGEN:777998","MESH:C579873","UMLS:C3711390"],"synonyms":[{"name":"microdeletion 9q22.3","type":"exact"}],"termid":"MONDO:0019179","xrefs":{"Monarch":{"xref_id":"0019179"}}}


id: PBO:0088548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA snoRNP complex protein","termid":"PBO:0088548"}


id: PBO:0088055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-like protein with similarity to mammalian NEDD8; conjugation (neddylation) substrates include the cullins Cdc53p, Rtt101p, and Cul3p; activated by Ula1p and Uba3p (E1 enzyme pair); conjugation mediated by Ubc12p (E2 enzyme)","termid":"PBO:0088055"}


id: FYPO:0003161
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell is too low to detect. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"RNA absent from cell","termid":"FYPO:0001889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"RNA absent from cell during vegetative growth","secondary_identifiers":["FYPO:0004509"],"synonyms":[{"name":"RNA absent from cell during mitotic cell cycle","type":"related"},{"name":"mRNA absent from cell","type":"narrow"},{"name":"mRNA absent from cell during mitotic cell cycle","type":"related"},{"name":"mRNA absent from cell during vegetative growth","type":"narrow"},{"name":"mRNA transcripts absent from cell","type":"narrow"},{"name":"messenger RNA absent from cell","type":"narrow"},{"name":"transcripts absent from cell during vegetative growth","type":"exact"},{"name":"undetectable RNA level during vegetative growth","type":"exact"},{"name":"undetectable mRNA level","type":"narrow"}],"termid":"FYPO:0003161"}


id: GO:1901324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a trichodermin stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to trichodermin","termid":"GO:1901324"}


id: PBO:0038767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 5","termid":"PBO:0038767"}


id: PBO:0003779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk23","termid":"PBO:0003779"}


id: FYPO:0001850
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of ferric iron ions into a cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ferric iron import","termid":"FYPO:0001849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased ferric iron import","synonyms":[{"name":"decreased cellular ferric iron import","type":"exact"},{"name":"decreased ferric ion import","type":"exact"},{"name":"decreased ferric ion import across plasma membrane","type":"exact"},{"name":"decreased ferric iron import during mitotic cell cycle","type":"related"},{"name":"decreased ferric iron import during vegetative growth","type":"exact"},{"name":"decreased ferric iron import into cell","type":"narrow"},{"name":"decreased ferric iron ion import","type":"exact"},{"name":"reduced ferric iron import","type":"exact"}],"termid":"FYPO:0001850"}


id: GO:0045872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of rhodopsin gene expression.","definition_xrefs":["GOC:dph","GOC:go_curators","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of rhodopsin gene expression (obsolete GO:0045872)","synonyms":[{"name":"activation of rhodopsin gene activity","type":"narrow"},{"name":"positive regulation of rhodopsin gene activity","type":"exact"},{"name":"stimulation of rhodopsin gene activity","type":"narrow"},{"name":"up regulation of rhodopsin gene activity","type":"exact"},{"name":"up-regulation of rhodopsin gene activity","type":"exact"},{"name":"upregulation of rhodopsin gene activity","type":"exact"}],"termid":"GO:0045872"}


id: GO:1901373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a lipid hydroperoxide into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"lipid hydroperoxide transport","termid":"GO:1901373"}


id: PBO:0065678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type Z2","termid":"PBO:0065678"}


id: MONDO:0011914
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypotrichosis-lymphedema-telangiectasia syndrome (grouping)","termid":"MONDO:0007670"},{"relation_name":"is_a","term_name":"lymphatic malformation","termid":"MONDO:0019313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"hypotrichosis-lymphedema-telangiectasia syndrome","secondary_identifiers":["UMLS:C1843004","OMIM:607823","GARD:15420","DOID:0111361","MESH:C564327","MEDGEN:375070"],"synonyms":[{"name":"HLTS","type":"related"},{"name":"hypotrichosis-lymphedema-telangiectasia syndrome","type":"exact"}],"termid":"MONDO:0011914","xrefs":{"Monarch":{"xref_id":"0011914"}}}


id: PR:O74988
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase polypeptide 5, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.10c","synonyms":[{"name":"Spom972h-cox5","type":"exact"},{"name":"cytochrome c oxidase polypeptide V (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74988"}


id: MONDO:0002086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acanthoma characterized by the presence of psoriasiform epidermal acanthosis and basal cells with pale cytoplasm.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acanthoma","termid":"MONDO:0002093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"clear cell acanthoma","secondary_identifiers":["NCIT:C97041","UMLS:C0333992","DOID:172","MEDGEN:83098","icd11.foundation:1582724858","SCTID:254670002"],"synonyms":[{"name":"Degos acanthoma","type":"exact"},{"name":"clear cell acanthoma (morphologic abnormality)","type":"exact"},{"name":"pale (clear cell) acanthoma","type":"exact"}],"termid":"MONDO:0002086","xrefs":{"Monarch":{"xref_id":"0002086"}}}


id: PBO:0056767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 18","termid":"PBO:0056767"}


id: MONDO:1012971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disturbances in growth processes leading to reduced height in non-human animals.","definition_xrefs":["PMID:28697878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dwarfism, non-human animal","termid":"MONDO:1012971","xrefs":{"Monarch":{"xref_id":"1012971"}}}


id: MONDO:1010143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Incontinentia pigmenti that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder, non-human animal","termid":"MONDO:1011308"},{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incontinentia pigmenti, non-human animal","secondary_identifiers":["OMIA:001899"],"termid":"MONDO:1010143","xrefs":{"Monarch":{"xref_id":"1010143"}}}


id: PBO:0087556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of SEACAT, a subcomplex of the SEA complex; Mtc1p, along with Rtc1p and Sea4p, redundantly inhibit the TORC1 inhibitory role of the Iml1p/SEACIT (Iml1p-Npr2p-Npr3p) subcomplex, a GAP for GTPase Gtr1p (EGOC subunit) in response to amino acid limitation, thereby resulting in activation of TORC1 signaling; SEA is a coatomer-related complex that associates dynamically with the vacuole; relative distribution to the vacuolar membrane decreases upon DNA replication stress","termid":"PBO:0087556"}


id: PR:O74329
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 40S ribosomal protein S29 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02488","PANTHER:PTHR12010:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S29 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.09","secondary_identifiers":["UniProtKB:O74329"],"synonyms":[{"name":"Spom972h-RPS29","type":"exact"}],"termid":"PR:O74329"}


id: PBO:0005571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA dihydrouridine synthase Dus4 (predicted)","termid":"PBO:0005571"}


id: PBO:0080921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YWHAQ pseudogene","termid":"PBO:0080921"}


id: MONDO:0001674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the colonic diverticula, generally with abscess formation and subsequent perforation.","definition_xrefs":["MESH:D004239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colonic disorder","termid":"MONDO:0003409"},{"relation_name":"is_a","term_name":"diverticulitis","termid":"MONDO:0004235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"diverticulitis of colon","secondary_identifiers":["SCTID:111359004","ICD9:562.11","ICD9:562.12","MEDGEN:3877","DOID:13254","UMLS:C0012814"],"synonyms":[{"name":"colon diverticulitis","type":"exact"},{"name":"colonic diverticular disease","type":"exact"}],"termid":"MONDO:0001674","xrefs":{"Monarch":{"xref_id":"0001674"}}}


id: PBO:0055341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2769","termid":"PBO:0055341"}


id: MONDO:0026767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 74, COVID-19-related, X-linked","secondary_identifiers":["DOID:0112063","UMLS:C5435745","OMIM:301051","MEDGEN:1768360"],"synonyms":[{"name":"IMD74","type":"related"},{"name":"IMMUNODEFICIENCY 74, COVID19-RELATED, X-LINKED","type":"related"},{"name":"TLR7 deficiency","type":"related"},{"name":"immunodeficiency 74, COVID19-related, X-linked, X-linked recessive","type":"exact"},{"name":"respiratory insufficiency due to SARS-CoV-2 viral infection","type":"related"}],"termid":"MONDO:0026767","xrefs":{"Monarch":{"xref_id":"0026767"}}}


id: MONDO:0035344
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neurologic disease characterized by lethargy, hypotonia, poor feeding, opisthotonus, and a typical high-pitched cry due to bilirubin accumulation in the globus pallidus, sub-thalamic nuclei, and other brain regions, resulting from severe neonatal unconjugated hyperbilirubinemia. Onset of symptoms is typically within the first three to five days of life. Additional features include fever, apnea, seizures, and coma. Especially respiratory failure or refractory seizures may lead to a fatal outcome.","definition_xrefs":["Orphanet:529799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute bilirubin encephalopathy","secondary_identifiers":["MEDGEN:1808922","UMLS:C5671282","GARD:22197"],"synonyms":[{"name":"ABE","type":"exact"},{"name":"Acute kernicterus","type":"exact"}],"termid":"MONDO:0035344","xrefs":{"Monarch":{"xref_id":"0035344"}}}


id: PATO:0000068
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"quality","termid":"PATO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qualitative","termid":"PATO:0000068"}


id: MONDO:0008183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Annular pancreas is a distinct form of duodenal atresia in which the head of the pancreas forms a ring around the second portion of the duodenum.","definition_xrefs":["Orphanet:675"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreas disorder","termid":"MONDO:0002356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"annular pancreas","secondary_identifiers":["SCTID:40315008","DOID:0060850","ICD10CM:Q45.1","GARD:705","icd11.foundation:1311285827","MEDGEN:56211","MESH:C536376","NCIT:C98813","UMLS:C0149955","MedDRA:10071757","OMIM:167750"],"synonyms":[{"name":"pancreas, annular","type":"related"}],"termid":"MONDO:0008183","xrefs":{"Monarch":{"xref_id":"0008183"}}}


id: PBO:0000796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate reductase Met9","termid":"PBO:0000796"}


id: PBO:0016041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M phase inducer tyrosine phosphatase Cdc25","termid":"PBO:0016041"}


id: PBO:0005721
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.2","termid":"PBO:0005721"}


id: GO:1901350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any cell-cell signaling that is involved in cell-cell junction organization.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete cell-cell signaling involved in cell-cell junction organization (obsolete GO:1901350)","synonyms":[{"name":"cell-cell signaling involved in cell-cell junction assembly and maintenance","type":"exact"},{"name":"cell-cell signaling involved in cell-cell junction biogenesis","type":"related"},{"name":"cell-cell signaling involved in cell-cell junction organisation","type":"exact"},{"name":"cell-cell signaling involved in intercellular junction assembly and maintenance","type":"exact"},{"name":"cell-cell signalling involved in cell-cell junction assembly and maintenance","type":"exact"},{"name":"cell-cell signalling involved in cell-cell junction biogenesis","type":"related"},{"name":"cell-cell signalling involved in cell-cell junction organisation","type":"exact"},{"name":"cell-cell signalling involved in cell-cell junction organization","type":"exact"},{"name":"cell-cell signalling involved in intercellular junction assembly and maintenance","type":"exact"}],"termid":"GO:1901350"}


id: PBO:0082587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cis-golgi GTPase-activating protein (GAP) for yeast Rabs; the Rab family members are Ypt1p (in vivo) and for Ypt1p, Sec4p, Ypt7p, and Ypt51p (in vitro); involved in vesicle docking and fusion; interacts with autophagosome component Atg8p","termid":"PBO:0082587"}


id: GO:0060328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin filament-based movement by which cytoplasmic actin filaments slide past one another resulting in a contraction that propels the cell in the direction that has been defined as the front of the cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic actin-based contraction involved in cell motility","termid":"GO:0060327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoplasmic actin-based contraction involved in forward cell motility","synonyms":[{"name":"cytoplasmic actin-based contraction involved in forward cell locomotion","type":"related"}],"termid":"GO:0060328"}


id: PBO:0083656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endonuclease I-SceIII; encoded by a mobile group I intron within the mitochondrial COX1 gene","termid":"PBO:0083656"}


id: MONDO:0012760
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"idiopathic generalized epilepsy","termid":"MONDO:0005579"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, idiopathic generalized, susceptibility to, 5","secondary_identifiers":["DOID:0111320","MEDGEN:393842","OMIM:611934","UMLS:C2677808"],"synonyms":[{"name":"EIG5","type":"exact"},{"name":"epilepsy, idiopathic generalized, susceptibility to, 5","type":"exact"},{"name":"epilepsy, idiopathic generalized, susceptibility to, locus on chromosome 10","type":"related"}],"termid":"MONDO:0012760","xrefs":{"Monarch":{"xref_id":"0012760"}}}


id: GO:0032516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the activity of a phosphoprotein phosphatase.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphoprotein phosphatase activity (obsolete GO:0032516)","synonyms":[{"name":"activation of calcineurin activity","type":"narrow"},{"name":"activation of phosphoprotein phosphatase activity","type":"narrow"},{"name":"activation of protein phosphatase 3 activity","type":"related"},{"name":"activation of protein phosphatase type 2A activity","type":"narrow"},{"name":"activation of protein phosphatase type 2B activity","type":"narrow"},{"name":"calcineurin activation","type":"narrow"},{"name":"positive regulation of calcineurin activity","type":"narrow"},{"name":"positive regulation of protein phosphatase 2 activity","type":"related"},{"name":"positive regulation of protein phosphatase 3 activity","type":"related"},{"name":"positive regulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"positive regulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"stimulation of phosphoprotein phosphatase activity","type":"narrow"},{"name":"stimulation of protein phosphatase 2 activity","type":"related"},{"name":"stimulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"stimulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"up regulation of calcineurin activity","type":"narrow"},{"name":"up regulation of phosphoprotein phosphatase activity","type":"exact"},{"name":"up regulation of protein phosphatase 2 activity","type":"related"},{"name":"up regulation of protein phosphatase 3 activity","type":"related"},{"name":"up regulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"up regulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"up-regulation of phosphoprotein phosphatase activity","type":"exact"},{"name":"up-regulation of protein phosphatase 2 activity","type":"related"},{"name":"up-regulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"up-regulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"upregulation of phosphoprotein phosphatase activity","type":"exact"},{"name":"upregulation of protein phosphatase 2 activity","type":"related"},{"name":"upregulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"upregulation of protein phosphatase type 2B activity","type":"narrow"}],"termid":"GO:0032516"}


id: MONDO:0005068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gross necrosis of the myocardium, as a result of interruption of the blood supply to the area, as in coronary thrombosis.","definition_xrefs":["NCIT:C27996"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"coronary artery disorder","termid":"MONDO:0005010"},{"relation_name":"is_a","term_name":"myocardial disorder","termid":"MONDO:0024643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"myocardial infarction","secondary_identifiers":["SCTID:22298006","UMLS:C0027051","MESH:D009203","MEDGEN:10150","DOID:5844","EFO:0000612","HP:0001658","ICD10CM:I21","NANDO:2200248"],"synonyms":[{"name":"MI","type":"exact"},{"name":"MI, myocardial infarction","type":"exact"},{"name":"heart attack","type":"exact"},{"name":"infarction (MI), myocardial","type":"exact"},{"name":"myocardial infarct","type":"exact"},{"name":"myocardial infarction","type":"exact"},{"name":"myocardial infarction (disease)","type":"exact"},{"name":"myocardial infarction, (MI)","type":"exact"}],"termid":"MONDO:0005068","xrefs":{"Monarch":{"xref_id":"0005068"}}}


id: GO:0160191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a C28-steroid + O2 + reduced NADPH--hemoprotein reductase = a (22S)-22-hydroxy C28-steroid + H+ + H2O + oxidized NADPH--hemoprotein reductase. Also catalyzes the C-22 hydroxylation of a variety of C27 and C29 steroids.","definition_xrefs":["EC:1.14.14.178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"steroid 22S-hydroxylase activity","synonyms":[{"name":"steroid C-22 hydroxylase activity","type":"exact"}],"termid":"GO:0160191"}


id: PR:Q10332
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC582.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ATP-dependent helicase C582.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC582.10c","synonyms":[{"name":"Spom972h-SPBC582.10c","type":"exact"}],"termid":"PR:Q10332"}


id: GO:0019871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of a sodium channel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ion channel inhibitor activity","termid":"GO:0008200"},{"relation_name":"is_a","term_name":"sodium channel regulator activity","termid":"GO:0017080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140678","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"sodium channel inhibitor activity","secondary_identifiers":["GO:0019868"],"termid":"GO:0019871"}


id: GO:0005576
data:
  {"annotated_genes":["SJAG_02131","SJAG_05001","SJAG_03444","SJAG_02582","SJAG_04301","SJAG_00975","SJAG_00981","SJAG_02192","SJAG_00781","SJAG_02959","SJAG_03824","SJAG_00620","SJAG_01970","SJAG_01171","SJAG_02949","SJAG_02580","SJAG_04073","SJAG_04067","SJAG_02093","SJAG_02091"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87059,87060,87676,88567,90025,91363,91370,94584,95189,99844,100309,101008,101094,101095,101439,101440,101954,106393,106394,109935,109936,112827,112828,113196,113197,115080,115619],"is_not":false,"summary":null,"term":"GO:0005576"}]},"cv_name":"cellular_component","definition":"The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00620":null,"SJAG_00781":null,"SJAG_00975":null,"SJAG_00981":null,"SJAG_01171":null,"SJAG_01970":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02131":null,"SJAG_02192":null,"SJAG_02580":null,"SJAG_02582":null,"SJAG_02949":null,"SJAG_02959":null,"SJAG_03444":null,"SJAG_03824":null,"SJAG_04067":null,"SJAG_04073":null,"SJAG_04301":null,"SJAG_05001":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extracellular region","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Extracellular"],"synonyms":[{"name":"extracellular","type":"exact"}],"termid":"GO:0005576","terms_by_termid":{"GO:0005576":null}}


id: GO:0033448
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AGG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"AGG codon-amino acid adaptor activity","synonyms":[{"name":"arginine tRNA","type":"related"}],"termid":"GO:0033448"}


id: GO:1903287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of potassium ion import across the plasma membrane.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF","GOC:TermGenie","GO_REF:0000058","GOC:rl","PMID:10636900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of potassium ion transmembrane transport","termid":"GO:1901380"},{"relation_name":"is_a","term_name":"regulation of potassium ion import","termid":"GO:1903286"},{"relation_name":"negatively_regulates","term_name":"potassium ion import across plasma membrane","termid":"GO:1990573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"negative regulation of potassium ion import across plasma membrane","synonyms":[{"name":"down regulation of potassium import","type":"broad"},{"name":"down regulation of potassium ion import","type":"broad"},{"name":"down regulation of potassium ion uptake","type":"broad"},{"name":"down-regulation of potassium import","type":"broad"},{"name":"down-regulation of potassium ion import","type":"broad"},{"name":"down-regulation of potassium ion uptake","type":"broad"},{"name":"downregulation of potassium import","type":"broad"},{"name":"downregulation of potassium ion import","type":"broad"},{"name":"downregulation of potassium ion uptake","type":"broad"},{"name":"inhibition of potassium import","type":"narrow"},{"name":"inhibition of potassium ion import","type":"narrow"},{"name":"inhibition of potassium ion uptake","type":"narrow"},{"name":"negative regulation of potassium import","type":"broad"},{"name":"negative regulation of potassium ion import","type":"broad"},{"name":"negative regulation of potassium ion uptake","type":"broad"}],"termid":"GO:1903287"}


id: GO:0021847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The proliferation of neuroblasts in the ventricular zone of the cerebral cortex. The neuronal progenitors of these cells will migrate radially.","definition_xrefs":["PMID:12626695","GOC:dph","GOC:cls","GOC:dgh","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"forebrain ventricular zone progenitor cell division","termid":"GO:0021869"},{"relation_name":"is_a","term_name":"forebrain neuroblast division","termid":"GO:0021873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular zone neuroblast division","synonyms":[{"name":"neuroblast division in ventricular zone","type":"exact"}],"termid":"GO:0021847"}


id: MONDO:1011836
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar cortical atrophy, non-human animal","secondary_identifiers":["OMIA:000177"],"termid":"MONDO:1011836","xrefs":{"Monarch":{"xref_id":"1011836"}}}


id: GO:0102656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:2-2-trans-16:1-phosphatidylglycerol + O2 + a reduced electron acceptor = 1-18:3-2-trans-16:1-phosphatidylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:2-2-trans-16:1-phosphatidylglycerol desaturase activity (obsolete GO:0102656)","termid":"GO:0102656"}


id: PBO:0034165
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_disappearance_of","termid":"PBO:0034165"}


id: PBO:0061038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPA magnesium transporter 1","termid":"PBO:0061038"}


id: GO:0007015
data:
  {"annotated_genes":["SJAG_00521","SJAG_04522","SJAG_00970","SJAG_01268","SJAG_04982","SJAG_02700","SJAG_02075","SJAG_03086","SJAG_02864","SJAG_04100","SJAG_01894","SJAG_04624","SJAG_03025","SJAG_01964","SJAG_01993","SJAG_04172","SJAG_03380","SJAG_04703","SJAG_04621","SJAG_00938","SJAG_04498","SJAG_01732","SJAG_02245","SJAG_03011","SJAG_01388","SJAG_00677","SJAG_00279","SJAG_02228","SJAG_04479","SJAG_03455","SJAG_02566","SJAG_03088","SJAG_01384"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105060],"is_not":false,"summary":null,"term":"GO:0007015"},{"annotations":[88802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051764"},{"annotations":[87625,99363,104656,98337,99183,97409,90155,102813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090135"},{"annotations":[101215,93305,88803,104638,118135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051017"},{"annotations":[118136,115674,107620,99148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061572"},{"annotations":[115675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061573"},{"annotations":[92020,100420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030042"},{"annotations":[104639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051639"},{"annotations":[98338,64577,93306,91808,97213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030041"},{"annotations":[88844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045010"},{"annotations":[97789,88804,107621,97522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071520"},{"annotations":[104657,98339,106651,97410,99184,102241,87626,90156,99364,102814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034314"},{"annotations":[91809,87732,98398,113813],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051016"},{"annotations":[107623,115677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070649"},{"annotations":[104642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110009"},{"annotations":[97524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903479"},{"annotations":[90357],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0034316"},{"annotations":[107103],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032231"},{"annotations":[89304,90158,102243,101248,104660],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0030833"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"},{"relation_name":"part_of","term_name":"actin cytoskeleton organization","termid":"GO:0030036"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_00677":null,"SJAG_00938":null,"SJAG_00970":null,"SJAG_01268":null,"SJAG_01384":null,"SJAG_01388":null,"SJAG_01732":null,"SJAG_01894":null,"SJAG_01964":null,"SJAG_01993":null,"SJAG_02075":null,"SJAG_02228":null,"SJAG_02245":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_02864":null,"SJAG_03011":null,"SJAG_03025":null,"SJAG_03086":null,"SJAG_03088":null,"SJAG_03380":null,"SJAG_03455":null,"SJAG_04100":null,"SJAG_04172":null,"SJAG_04479":null,"SJAG_04498":null,"SJAG_04522":null,"SJAG_04621":null,"SJAG_04624":null,"SJAG_04703":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"actin filament organization","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"actin filament organisation","type":"exact"},{"name":"regulation of actin filament localization","type":"narrow"}],"termid":"GO:0007015","terms_by_termid":{"GO:0007015":null,"GO:0030041":null,"GO:0030042":null,"GO:0030833":null,"GO:0032231":null,"GO:0034314":null,"GO:0034316":null,"GO:0045010":null,"GO:0051016":null,"GO:0051017":null,"GO:0051639":null,"GO:0051764":null,"GO:0061572":null,"GO:0061573":null,"GO:0070649":null,"GO:0071520":null,"GO:0090135":null,"GO:0110009":null,"GO:1903479":null}}


id: FYPO:0002244
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which acid phosphatase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal acid phosphatase activity","termid":"FYPO:0001044"},{"relation_name":"is_a","term_name":"abolished phosphatase activity","termid":"FYPO:0004303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abolished acid phosphatase activity","synonyms":[{"name":"acid phosphatase activity abolished","type":"exact"}],"termid":"FYPO:0002244"}


id: GO:0052763
data:
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id: GO:0019126
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id: GO:0014076
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id: GO:2001125
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id: PBO:0108920
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id: GO:0003886
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id: PBO:0029147
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id: FYPO:0002298
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id: GO:0097488
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id: BFO:0000066
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id: PBO:0042304
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id: PBO:0035967
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id: FYPO:0002534
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id: MONDO:0005046
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disease","termid":"MONDO:0700096"}],"gene_count":98,"genes_by_uniquename":{"SJAG_00198":null,"SJAG_00222":null,"SJAG_00321":null,"SJAG_00328":null,"SJAG_00399":null,"SJAG_00400":null,"SJAG_00570":null,"SJAG_00610":null,"SJAG_00611":null,"SJAG_00677":null,"SJAG_00739":null,"SJAG_00771":null,"SJAG_00874":null,"SJAG_00907":null,"SJAG_00912":null,"SJAG_00978":null,"SJAG_00993":null,"SJAG_01013":null,"SJAG_01181":null,"SJAG_01349":null,"SJAG_01351":null,"SJAG_01407":null,"SJAG_01410":null,"SJAG_01457":null,"SJAG_01474":null,"SJAG_01697":null,"SJAG_01704":null,"SJAG_01732":null,"SJAG_01748":null,"SJAG_01759":null,"SJAG_01787":null,"SJAG_01798":null,"SJAG_01840":null,"SJAG_01884":null,"SJAG_01960":null,"SJAG_02038":null,"SJAG_02039":null,"SJAG_02184":null,"SJAG_02208":null,"SJAG_02288":null,"SJAG_02294":null,"SJAG_02317":null,"SJAG_02330":null,"SJAG_02339":null,"SJAG_02342":null,"SJAG_02453":null,"SJAG_02479":null,"SJAG_02527":null,"SJAG_02528":null,"SJAG_02556":null,"SJAG_02572":null,"SJAG_02648":null,"SJAG_02690":null,"SJAG_02708":null,"SJAG_02763":null,"SJAG_02772":null,"SJAG_02803":null,"SJAG_02912":null,"SJAG_02923":null,"SJAG_03089":null,"SJAG_03119":null,"SJAG_03136":null,"SJAG_03146":null,"SJAG_03151":null,"SJAG_03181":null,"SJAG_03193":null,"SJAG_03333":null,"SJAG_03363":null,"SJAG_03453":null,"SJAG_03536":null,"SJAG_03596":null,"SJAG_03684":null,"SJAG_03720":null,"SJAG_03723":null,"SJAG_03756":null,"SJAG_03805":null,"SJAG_03850":null,"SJAG_03889":null,"SJAG_03905":null,"SJAG_04077":null,"SJAG_04100":null,"SJAG_04118":null,"SJAG_04199":null,"SJAG_04210":null,"SJAG_04290":null,"SJAG_04380":null,"SJAG_04541":null,"SJAG_04743":null,"SJAG_04745":null,"SJAG_04810":null,"SJAG_04865":null,"SJAG_04910":null,"SJAG_04928":null,"SJAG_04969":null,"SJAG_04991":null,"SJAG_05024":null,"SJAG_05180":null,"SJAG_05979":null},"genotype_count":0,"in_subsets":["pombe_mondo_slim"],"is_obsolete":false,"name":"immune system disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:2914","UMLS:C0021053","NANDO:1100004","SCTID:414029004","ICD9:279.1","MEDGEN:5759","ICD9:279.9","ICD9:279.4","ICD9:279.49","ICD9:279.19","ICD9:279.8","ICD9:279.10","MESH:D007154","ICD9:279","EFO:0000540","NANDO:2100202"],"synonyms":[{"name":"disease of immune system","type":"exact"},{"name":"disease or disorder of immune system","type":"exact"},{"name":"disorder of immune system","type":"exact"},{"name":"immune disease","type":"exact"},{"name":"immune disorder","type":"exact"},{"name":"immune dysfunction","type":"exact"},{"name":"immune system disease or disorder","type":"exact"},{"name":"immune system disorder","type":"exact"}],"termid":"MONDO:0005046","terms_by_termid":{"MONDO:0007918":null,"MONDO:0008104":null,"MONDO:0008214":null,"MONDO:0008218":null,"MONDO:0008644":null,"MONDO:0008840":null,"MONDO:0009284":null,"MONDO:0009693":null,"MONDO:0009756":null,"MONDO:0009849":null,"MONDO:0009947":null,"MONDO:0009953":null,"MONDO:0009973":null,"MONDO:0010066":null,"MONDO:0010294":null,"MONDO:0010455":null,"MONDO:0010504":null,"MONDO:0010518":null,"MONDO:0010600":null,"MONDO:0011257":null,"MONDO:0011336":null,"MONDO:0011405":null,"MONDO:0011462":null,"MONDO:0011686":null,"MONDO:0011871":null,"MONDO:0011873":null,"MONDO:0011971":null,"MONDO:0011997":null,"MONDO:0012146":null,"MONDO:0012316":null,"MONDO:0012371":null,"MONDO:0012383":null,"MONDO:0012429":null,"MONDO:0012471":null,"MONDO:0012472":null,"MONDO:0012559":null,"MONDO:0012610":null,"MONDO:0012650":null,"MONDO:0012831":null,"MONDO:0013135":null,"MONDO:0013186":null,"MONDO:0013248":null,"MONDO:0013276":null,"MONDO:0013499":null,"MONDO:0013766":null,"MONDO:0013767":null,"MONDO:0013779":null,"MONDO:0013818":null,"MONDO:0013851":null,"MONDO:0014007":null,"MONDO:0014108":null,"MONDO:0014118":null,"MONDO:0014168":null,"MONDO:0014353":null,"MONDO:0014391":null,"MONDO:0014487":null,"MONDO:0014887":null,"MONDO:0014985":null,"MONDO:0014986":null,"MONDO:0014987":null,"MONDO:0018874":null,"MONDO:0024541":null,"MONDO:0030266":null,"MONDO:0030428":null,"MONDO:0030491":null,"MONDO:0030519":null,"MONDO:0030528":null,"MONDO:0030693":null,"MONDO:0030798":null,"MONDO:0030813":null,"MONDO:0030894":null,"MONDO:0030898":null,"MONDO:0030971":null,"MONDO:0032899":null,"MONDO:0033669":null,"MONDO:0044208":null,"MONDO:0044725":null,"MONDO:0054698":null,"MONDO:0054699":null,"MONDO:0054700":null,"MONDO:0054862":null,"MONDO:0957595":null,"MONDO:0957809":null,"MONDO:0957920":null,"MONDO:0958013":null,"MONDO:0958017":null,"MONDO:0958030":null,"MONDO:8000024":null},"xrefs":{"Monarch":{"xref_id":"0005046"}}}


id: GO:0106254
data:
  {"annotated_genes":["SJAG_02613","SJAG_02657","SJAG_03715"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[118476,117033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140550"},{"annotations":[114400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032935"}]},"cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of a lipid.","definition_xrefs":["GOC:vw","PMID:30075144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sensor activity","termid":"GO:0140299"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02613":null,"SJAG_02657":null,"SJAG_03715":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140299"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0140299"],"is_obsolete":false,"name":"lipid sensor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"lipid sensing activity","type":"exact"}],"termid":"GO:0106254","terms_by_termid":{"GO:0032935":null,"GO:0140550":null}}


id: MONDO:0003480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dysgerminoma (disease) that involves the pineal body.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant pineal area germ cell neoplasm","termid":"MONDO:0002073"},{"relation_name":"is_a","term_name":"dysgerminoma","termid":"MONDO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pineal region dysgerminoma","secondary_identifiers":["UMLS:C1335415","DOID:5510","MEDGEN:233328","NCIT:C7169"],"synonyms":[{"name":"pineal body dysgerminoma (disease)","type":"exact"},{"name":"pineal dysgerminoma","type":"exact"},{"name":"pineal region dysgerminoma","type":"exact"}],"termid":"MONDO:0003480","xrefs":{"Monarch":{"xref_id":"0003480"}}}


id: GO:1901188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ephrin receptor signaling pathway.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of ephrin receptor signaling pathway","termid":"GO:1901187"},{"relation_name":"negatively_regulates","term_name":"ephrin receptor signaling pathway","termid":"GO:0048013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ephrin receptor signaling pathway","synonyms":[{"name":"down regulation of Eph receptor signaling pathway","type":"exact"},{"name":"down regulation of Eph receptor signalling pathway","type":"exact"},{"name":"down regulation of ephrin receptor signaling pathway","type":"exact"},{"name":"down-regulation of Eph receptor signaling pathway","type":"exact"},{"name":"down-regulation of Eph receptor signalling pathway","type":"exact"},{"name":"down-regulation of ephrin receptor signaling pathway","type":"exact"},{"name":"downregulation of Eph receptor signaling pathway","type":"exact"},{"name":"downregulation of Eph receptor signalling pathway","type":"exact"},{"name":"downregulation of ephrin receptor signaling pathway","type":"exact"},{"name":"inhibition of Eph receptor signaling pathway","type":"exact"},{"name":"inhibition of Eph receptor signalling pathway","type":"exact"},{"name":"inhibition of ephrin receptor signaling pathway","type":"narrow"},{"name":"negative regulation of Eph receptor signaling pathway","type":"exact"},{"name":"negative regulation of Eph receptor signalling pathway","type":"exact"}],"termid":"GO:1901188"}


id: PBO:0018143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double strand break localizing Dbl1","termid":"PBO:0018143"}


id: MONDO:1012972
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary neurological disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972","xrefs":{"Monarch":{"xref_id":"1012972"}}}


id: GO:1905278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epithelial tube formation.","definition_xrefs":["GO_REF:0000058","GOC:bhm","GOC:TermGenie","PMID:25745997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of epithelial tube formation","termid":"GO:1905276"},{"relation_name":"is_a","term_name":"positive regulation of morphogenesis of an epithelium","termid":"GO:1905332"},{"relation_name":"positively_regulates","term_name":"epithelial tube formation","termid":"GO:0072175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epithelial tube formation","synonyms":[{"name":"activation of epithelial tube formation","type":"narrow"},{"name":"up regulation of epithelial tube formation","type":"exact"},{"name":"up-regulation of epithelial tube formation","type":"exact"},{"name":"upregulation of epithelial tube formation","type":"exact"}],"termid":"GO:1905278"}


id: PBO:0013755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coproporphyrinogen III oxidase Hem13 (predicted)","termid":"PBO:0013755"}


id: PBO:0071425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 31","termid":"PBO:0071425"}


id: PBO:0081232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger MYND-type containing 12","termid":"PBO:0081232"}


id: GO:0034779
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-isopropenyl-2-ketocyclohexane-1-carboxyl-CoA + H2O = 3-isopropenylpimelyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-isopropenyl-2-ketocyclohexane-1-carboxyl-CoA hydrolase activity (obsolete GO:0034779)","termid":"GO:0034779"}


id: PBO:0001205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Pmc5","termid":"PBO:0001205"}


id: MONDO:0042980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial periodic paralysis","termid":"MONDO:0000995"},{"relation_name":"is_a","term_name":"Huntington disease","termid":"MONDO:0007739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"Westphal disease","secondary_identifiers":["MESH:C536694","UMLS:C1279186","GTR:AN0099343","GTR:AN0099345","GARD:5557","MEDGEN:224821","SCTID:182747006","GTR:AN0099344"],"synonyms":[{"name":"HD- Westphal variant","type":"related"},{"name":"Westphal disease","type":"exact"},{"name":"Westphal variant of Huntington's disease","type":"related"}],"termid":"MONDO:0042980","xrefs":{"Monarch":{"xref_id":"0042980"}}}


id: GO:2000149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of planar cell polarity pathway involved in ventricular septum morphogenesis.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of planar cell polarity pathway involved in ventricular septum morphogenesis (obsolete GO:2000149)","termid":"GO:2000149"}


id: PR:Q9UTN0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- toe2 gene.","definition_xrefs":["UniProtKB:Q9UTN0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C139.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC139.03","synonyms":[{"name":"Spom972h-toe2","type":"exact"}],"termid":"PR:Q9UTN0"}


id: GO:2000863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of estrogen secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid hormone secretion","termid":"GO:2000833"},{"relation_name":"is_a","term_name":"regulation of estrogen secretion","termid":"GO:2000861"},{"relation_name":"positively_regulates","term_name":"estrogen secretion","termid":"GO:0035937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"positive regulation of estrogen secretion","synonyms":[{"name":"positive regulation of oestrogen secretion","type":"related"}],"termid":"GO:2000863"}


id: PBO:0045098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DM1 locus antisense RNA","termid":"PBO:0045098"}


id: PBO:0029209
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_cobalt","termid":"PBO:0029209"}


id: GO:1901880
data:
  {"annotated_genes":["SJAG_02700","SJAG_01993","SJAG_00279","SJAG_01894"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91809,113813,87732,98398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein depolymerization.","definition_xrefs":["GOC:rl","GOC:BHF","PMID:12032137","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex disassembly","termid":"GO:0043242"},{"relation_name":"is_a","term_name":"regulation of protein depolymerization","termid":"GO:1901879"},{"relation_name":"negatively_regulates","term_name":"protein depolymerization","termid":"GO:0051261"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein depolymerization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of protein depolymerization","type":"exact"},{"name":"down regulation of protein polymer breakdown","type":"exact"},{"name":"down regulation of protein polymer catabolic process","type":"exact"},{"name":"down regulation of protein polymer catabolism","type":"exact"},{"name":"down regulation of protein polymer degradation","type":"exact"},{"name":"down-regulation of protein depolymerization","type":"exact"},{"name":"down-regulation of protein polymer breakdown","type":"exact"},{"name":"down-regulation of protein polymer catabolic process","type":"exact"},{"name":"down-regulation of protein polymer catabolism","type":"exact"},{"name":"down-regulation of protein polymer degradation","type":"exact"},{"name":"downregulation of protein depolymerization","type":"exact"},{"name":"downregulation of protein polymer breakdown","type":"exact"},{"name":"downregulation of protein polymer catabolic process","type":"exact"},{"name":"downregulation of protein polymer catabolism","type":"exact"},{"name":"downregulation of protein polymer degradation","type":"exact"},{"name":"inhibition of protein depolymerization","type":"narrow"},{"name":"inhibition of protein polymer breakdown","type":"exact"},{"name":"inhibition of protein polymer catabolic process","type":"exact"},{"name":"inhibition of protein polymer catabolism","type":"exact"},{"name":"inhibition of protein polymer degradation","type":"exact"},{"name":"negative regulation of protein polymer breakdown","type":"exact"},{"name":"negative regulation of protein polymer catabolic process","type":"exact"},{"name":"negative regulation of protein polymer catabolism","type":"exact"},{"name":"negative regulation of protein polymer degradation","type":"exact"}],"termid":"GO:1901880","terms_by_termid":{"GO:0051016":null}}


id: PBO:0079788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A9","termid":"PBO:0079788"}


id: PR:P17937
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rlp7 gene.","definition_xrefs":["UniProtKB:P17937","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L7-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.06","synonyms":[{"name":"Spom972h-rlp7","type":"exact"}],"termid":"PR:P17937"}


id: PBO:0029401
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_protein_localization_to_cell_division_site","termid":"PBO:0029401"}


id: PBO:0052931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 20-3","termid":"PBO:0052931"}


id: PBO:0002888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1770 family protein","termid":"PBO:0002888"}


id: GO:0002327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of an immature B cell.","definition_xrefs":["ISBN:0781735149","PMID:16551251","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell differentiation","termid":"GO:0030183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immature B cell differentiation","synonyms":[{"name":"immature B cell development","type":"related"},{"name":"immature B lymphocyte differentiation","type":"exact"},{"name":"immature B-cell differentiation","type":"exact"},{"name":"immature B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002327"}


id: PBO:0075320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase 1 pseudogene 2","termid":"PBO:0075320"}


id: GO:0060542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of strand invasion. Strand invasion is the process in which the nucleoprotein complex (composed of the broken single-strand DNA and the recombinase) searches and identifies a region of homology in intact duplex DNA. The broken single-strand DNA displaces the like strand and forms Watson-Crick base pairs with its complement, forming a duplex in which each strand is from one of the two recombining DNA molecules.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"DNA strand invasion","termid":"GO:0042148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of strand invasion","termid":"GO:0060542"}


id: PBO:0083761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential kinetochore protein; component of the CBF3 complex that binds the CDEIII region of the centromere; contains an N-terminal Zn2Cys6 type zinc finger domain, a C-terminal acidic domain, and a putative coiled coil dimerization domain","termid":"PBO:0083761"}


id: PBO:0087592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ASTRA complex, involved in chromatin remodeling; subunit of the telomere cap complex DNA-binding protein specific to single-stranded yeast telomeric DNA repeats, required for telomere length regulation and telomere position effect; involved in the stability or biogenesis of PIKKs such as TORC1","termid":"PBO:0087592"}


id: PBO:0056122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysosomal enzyme trafficking factor","termid":"PBO:0056122"}


id: FYECO:0000372
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which manumycin A was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ manumycin A","synonyms":[{"name":"+ manu-A","type":"exact"}],"termid":"FYECO:0000372"}


id: MONDO:0014290
data:
  {"annotated_genes":["SJAG_05277"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85124],"is_not":false,"summary":null,"term":"MONDO:0014290"}]},"cv_name":"mondo","definition":"COASY protein-associated neurodegeneration (CoPAN) is a very rare, slowly progressive form of neurodegeneration with brain iron accumulation (NBIA) characterized by classic NBIA features. The clinical manifestations include early-onset spastic-dystonic paraparesis, oromandibular dystonia, dysarthria, parkinsonism, axonal neuropathy, progressive cognitive impairment, complex motor tics, and obsessive-compulsive disorder.","definition_xrefs":["Orphanet:397725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurodegeneration with brain iron accumulation","termid":"MONDO:0018307"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005066","MONDO:0002039"],"is_obsolete":false,"name":"neurodegeneration with brain iron accumulation 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110740","UMLS:C4517377","SCTID:732264002","OMIM:615643","MEDGEN:1387791","GARD:12571"],"synonyms":[{"name":"COASY neurodegeneration with brain iron accumulation","type":"exact"},{"name":"COASY protein-associated neurodegeneration","type":"related"},{"name":"CoPAN","type":"exact"},{"name":"NBIA6","type":"exact"},{"name":"neurodegeneration with brain iron accumulation 6","type":"exact"},{"name":"neurodegeneration with brain iron accumulation caused by mutation in COASY","type":"exact"},{"name":"neurodegeneration with brain iron accumulation due to COASY mutation","type":"exact"},{"name":"neurodegeneration with brain iron accumulation type 6","type":"exact"}],"termid":"MONDO:0014290","terms_by_termid":{"MONDO:0014290":null},"xrefs":{"Monarch":{"xref_id":"0014290"}}}


id: PBO:0060638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor coactivator 1","termid":"PBO:0060638"}


id: GO:1900632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tridecane.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkane biosynthetic process","termid":"GO:0043447"},{"relation_name":"is_a","term_name":"tridecane metabolic process","termid":"GO:1900631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tridecane biosynthetic process","synonyms":[{"name":"tridecane anabolism","type":"exact"},{"name":"tridecane biosynthesis","type":"exact"},{"name":"tridecane formation","type":"exact"},{"name":"tridecane synthesis","type":"exact"}],"termid":"GO:1900632"}


id: GO:0060334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of an interferon-gamma-mediated signaling pathway.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"is_a","term_name":"regulation of response to type II interferon","termid":"GO:0060330"},{"relation_name":"regulates","term_name":"type II interferon-mediated signaling pathway","termid":"GO:0060333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of type II interferon-mediated signaling pathway","secondary_identifiers":["Reactome:R-HSA-877312"],"synonyms":[{"name":"regulation of gamma-interferon-mediated signaling pathway","type":"related"},{"name":"regulation of immune interferon signaling pathway","type":"exact"},{"name":"regulation of interferon-gamma-mediated signaling pathway","type":"exact"},{"name":"regulation of interferon-gamma-mediated signalling pathway","type":"exact"},{"name":"regulation of type II IFN-mediated signaling pathway","type":"broad"}],"termid":"GO:0060334"}


id: PBO:0049313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase theta 2 (gene/pseudogene)","termid":"PBO:0049313"}


id: FYPO:0004107
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during G2 phase of the mitotic cell cycle is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"},{"relation_name":"is_a","term_name":"altered protein level during vegetative growth","termid":"FYPO:0001325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001985","FYPO:0006551","FYPO:0001312","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"normal protein level during mitotic G2 phase","synonyms":[{"name":"normal protein accumulation during mitotic G2 phase","type":"related"},{"name":"normal protein level during G2 phase of mitotic cell cycle","type":"related"},{"name":"normal protein level during mitotic G2 phase during vegetative growth","type":"exact"}],"termid":"FYPO:0004107"}


id: PBO:0087925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor that regulates the pleiotropic drug response; zinc cluster protein that is a master regulator involved in recruiting other zinc cluster proteins to pleiotropic drug response elements (PDREs) to fine tune the regulation of multidrug resistance genes; relocalizes to the cytosol in response to hypoxia; PDR1 has a paralog, PDR3, that arose from the whole genome duplication","termid":"PBO:0087925"}


id: PBO:0052372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIF18B divergent transcript","termid":"PBO:0052372"}


id: GO:0034492
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the hydrogenosome membrane.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"hydrogenosome","termid":"GO:0042566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"hydrogenosome lumen","termid":"GO:0034492"}


id: GO:1900317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of maltopentaose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of maltopentaose transport","termid":"GO:1900315"},{"relation_name":"is_a","term_name":"positive regulation of pentasaccharide transport","termid":"GO:1900362"},{"relation_name":"positively_regulates","term_name":"maltopentaose transport","termid":"GO:2001101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of maltopentaose transport","synonyms":[{"name":"activation of maltopentaose transport","type":"narrow"},{"name":"up regulation of maltopentaose transport","type":"exact"},{"name":"up-regulation of maltopentaose transport","type":"exact"},{"name":"upregulation of maltopentaose transport","type":"exact"}],"termid":"GO:1900317"}


id: GO:0071813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a lipoprotein particle. A lipoprotein particle, also known as a lipoprotein, is a clathrate complex consisting of a lipid enwrapped in a protein host without covalent binding in such a way that the complex has a hydrophilic outer surface consisting of all the protein and the polar ends of any phospholipids.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lipid complex binding","termid":"GO:0071814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"lipoprotein particle binding","synonyms":[{"name":"lipoprotein binding","type":"related"},{"name":"plasma lipoprotein binding","type":"related"},{"name":"plasma lipoprotein particle binding","type":"exact"}],"termid":"GO:0071813"}


id: GO:0010800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of peptidyl-threonine phosphorylation. Peptidyl-threonine phosphorylation is the phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein phosphorylation","termid":"GO:0001934"},{"relation_name":"is_a","term_name":"regulation of peptidyl-threonine phosphorylation","termid":"GO:0010799"},{"relation_name":"positively_regulates","term_name":"peptidyl-threonine phosphorylation","termid":"GO:0018107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peptidyl-threonine phosphorylation","termid":"GO:0010800"}


id: GO:0005102
data:
  {"annotated_genes":["SJAG_02233","SJAG_02264","SJAG_02444","SJAG_00891"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70085,74201],"is_not":false,"summary":null,"term":"GO:0005102"},{"annotations":[73814,79817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001664"}]},"cv_name":"molecular_function","definition":"Binding to one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.","definition_xrefs":["GOC:bf","GOC:ceb","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00891":null,"SJAG_02233":null,"SJAG_02264":null,"SJAG_02444":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"signaling receptor binding","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Wikipedia:Ligand_(biochemistry)"],"synonyms":[{"name":"receptor binding","type":"broad"},{"name":"receptor ligand","type":"narrow"},{"name":"receptor-associated protein activity","type":"related"}],"termid":"GO:0005102","terms_by_termid":{"GO:0001664":null,"GO:0005102":null}}


id: MONDO:0019881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal trisomy 6q is a rare chromosomal anomaly syndrome resulting from the partial duplication of the long arm of chromosome 6, with highly variable phenotype, typically characterized by growth and developmental delay, intellectual disability, craniofacial dysmorphism (microcephaly, flat facial profile, frontal bossing, hypertelorism, downward-slanting palpebral fissures, flat nasal bridge, anteverted nares, bow shaped mouth, micrognathia), short webbed neck and joint contractures. Cardiac, urogenital, ophthalmologic and hand and foot anomalies, as well as umbilical hernia, spasticity, and seizures, are other features that have been reported.","definition_xrefs":["Orphanet:96098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 6","termid":"MONDO:0016957"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 6q","secondary_identifiers":["NORD:959","SCTID:763275001","MEDGEN:162773","UMLS:C0795817","GARD:19314","MESH:C537810"],"synonyms":[{"name":"Chromosome 6, Partial Trisomy 6q","type":"exact"},{"name":"distal duplication 6q","type":"exact"},{"name":"distal trisomy type 6q","type":"exact"},{"name":"telomeric duplication 6q","type":"exact"},{"name":"trisomy 6qter","type":"exact"}],"termid":"MONDO:0019881","xrefs":{"Monarch":{"xref_id":"0019881"}}}


id: GO:0036415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the propensity of transfer RNA (tRNA) molecules to degradation. Includes processes that both stabilize and destabilize tRNAs.","definition_xrefs":["GOC:aa","PMID:23572593","PMID:21502523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA stability","termid":"GO:0043487"},{"relation_name":"is_a","term_name":"regulation of tRNA catabolic process","termid":"GO:1902370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"regulation of tRNA stability","termid":"GO:0036415"}


id: GO:0090425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The epithelial cell differentiation process in which a relatively unspecialized cell acquires specialized features of an acinar cell, a secretory cell that is grouped together with other cells of the same type to form grape-shaped clusters known as acini.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glandular epithelial cell differentiation","termid":"GO:0002067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acinar cell differentiation","termid":"GO:0090425"}


id: PBO:0062318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily B member 3","termid":"PBO:0062318"}


id: PBO:0061755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-acyltransferase like, pseudogene","termid":"PBO:0061755"}


id: PR:O94644
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rtc5 gene.","definition_xrefs":["UniProtKB:O94644","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restriction of telomere capping protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21.02","synonyms":[{"name":"Spom972h-rtc5","type":"exact"}],"termid":"PR:O94644"}


id: GO:0002783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an antifungal peptide.","definition_xrefs":["ISBN:0781735149","PMID:11807545","GOC:add","PMID:15638771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimicrobial peptide biosynthetic process","termid":"GO:0002777"},{"relation_name":"part_of","term_name":"antifungal peptide production","termid":"GO:0002781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"antifungal peptide biosynthetic process","termid":"GO:0002783"}


id: PBO:0045096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLX6 antisense RNA 1","termid":"PBO:0045096"}


id: PBO:0086051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function required for growth on ethanol; contains a zinc finger region and has homology to human BRAP2, which is a cytoplasmic protein that binds nuclear localization sequences","termid":"PBO:0086051"}


id: PBO:0062744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily I member 1","termid":"PBO:0062744"}


id: GO:0009603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a symbiotic fungus, a fungus living in close physical association with another organism, is received and converted into a molecular signal.","definition_xrefs":["GOC:hb","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of symbiont","termid":"GO:0009602"},{"relation_name":"is_a","term_name":"response to symbiotic fungus","termid":"GO:0009610"},{"relation_name":"is_a","term_name":"detection of fungus","termid":"GO:0016046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of symbiotic fungus","synonyms":[{"name":"detection of symbiotic fungi","type":"exact"},{"name":"perception of symbiotic fungi","type":"related"},{"name":"perception of symbiotic fungus","type":"related"}],"termid":"GO:0009603"}


id: PATO:0000147
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000147 absolute temperature (obsolete PATO:0000147)","termid":"PATO:0000147"}


id: MONDO:0700070
data:
  {"annotated_genes":["SJAG_04316","SJAG_04053","SJAG_01491"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012248"},{"annotations":[85341,85342,85340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009364"},{"annotations":[86152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013159"}]},"cv_name":"mondo","definition":"Any myopathy in which the cause of the disease is a variation in the POMT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of protein involved in O-glycosylation of alpha-dystroglycan","termid":"MONDO:0016155"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01491":null,"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005066","MONDO:0002320","MONDO:0024322"],"is_obsolete":false,"name":"myopathy caused by variation in POMT1","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"POMT1 myopathy","type":"exact"},{"name":"POMT1-related myopathy","type":"exact"},{"name":"myopathy caused by mutation in POMT1","type":"exact"}],"termid":"MONDO:0700070","terms_by_termid":{"MONDO:0009364":null,"MONDO:0012248":null,"MONDO:0013159":null},"xrefs":{"Monarch":{"xref_id":"0700070"}}}


id: PATO:0000944
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having a sharp or tapered end or point.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sharpness","synonyms":[{"name":"apiculate","type":"exact"}],"termid":"PATO:0000944"}


id: GO:2000583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of platelet-derived growth factor receptor-alpha signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of platelet-derived growth factor receptor signaling pathway","termid":"GO:0010640"},{"relation_name":"regulates","term_name":"platelet-derived growth factor receptor-alpha signaling pathway","termid":"GO:0035790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of platelet-derived growth factor receptor-alpha signaling pathway","synonyms":[{"name":"regulation of PDGF receptor-alpha signaling pathway","type":"exact"},{"name":"regulation of PDGFR-alpha signaling pathway","type":"related"},{"name":"regulation of alphaPDGF receptor signaling pathway","type":"exact"},{"name":"regulation of platelet-derived growth factor receptor-alpha signalling pathway","type":"exact"}],"termid":"GO:2000583"}


id: PR:Q9P7Y3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pkr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7Y3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase assembly factor pkr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.02","synonyms":[{"name":"Spom972h-pkr1","type":"exact"}],"termid":"PR:Q9P7Y3"}


id: GO:0006176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dATP, deoxyadenosine triphosphate (2'-deoxyadenosine 5'-triphosphate) from other compounds, including ADP, adenosine diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dATP biosynthetic process","termid":"GO:0006175"},{"relation_name":"is_a","term_name":"ADP metabolic process","termid":"GO:0046031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dATP biosynthetic process from ADP","synonyms":[{"name":"dATP anabolism from ADP","type":"exact"},{"name":"dATP formation from ADP","type":"exact"},{"name":"dATP synthesis from ADP","type":"exact"}],"termid":"GO:0006176"}


id: PBO:0057778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2467","termid":"PBO:0057778"}


id: MONDO:0044657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"MME-related autosomal dominant Charcot Marie Tooth disease type 2","secondary_identifiers":["Orphanet:497757","UMLS:C5567450","GARD:17916","MEDGEN:1798873"],"synonyms":[{"name":"MME-related autosomal dominant CMT2","type":"exact"},{"name":"MME-related autosomal dominant hereditary motor and sensory neuropathy type 2","type":"exact"}],"termid":"MONDO:0044657","xrefs":{"Monarch":{"xref_id":"0044657"}}}


id: PBO:0086927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pyruvate kinase; appears to be modulated by phosphorylation; transcription repressed by glucose, and Pyk2p may be active under low glycolytic flux; PYK2 has a paralog, CDC19, that arose from the whole genome duplication","termid":"PBO:0086927"}


id: MONDO:0002039
data:
  {"annotated_genes":["SJAG_03866","SJAG_16459","SJAG_01229","SJAG_03692","SJAG_00421","SJAG_00115","SJAG_01356","SJAG_01179","SJAG_00087","SJAG_03712","SJAG_00526","SJAG_05277","SJAG_04757","SJAG_01466","SJAG_02084","SJAG_02196","SJAG_02716","SJAG_03052","SJAG_00686","SJAG_01438","SJAG_00233","SJAG_04489","SJAG_02518","SJAG_01317","SJAG_02377","SJAG_05332","SJAG_02885","SJAG_03345","SJAG_02119"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016163"},{"annotations":[86283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011397"},{"annotations":[84721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014628"},{"annotations":[85658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013886"},{"annotations":[85922,85921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008083"},{"annotations":[84946,84947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008695"},{"annotations":[86231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013501"},{"annotations":[84812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010936"},{"annotations":[85420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013584"},{"annotations":[86209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008178"},{"annotations":[86422,86423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011706"},{"annotations":[86408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010476"},{"annotations":[85124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014290"},{"annotations":[85332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008767"},{"annotations":[86828,86827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0005090"},{"annotations":[85484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033482"},{"annotations":[85171],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011330"},{"annotations":[84734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011439"},{"annotations":[85249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011781"},{"annotations":[86752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008458"},{"annotations":[84686,84687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012246"},{"annotations":[84672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012450"},{"annotations":[85133,85134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007574"},{"annotations":[85329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013594"},{"annotations":[85779,85778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014417"},{"annotations":[86642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014934"}]},"cv_name":"mondo","definition":"A disease affects cognitive processes.","direct_ancestors":[{"relation_name":"is_a","term_name":"psychiatric disorder","termid":"MONDO:0002025"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00115":null,"SJAG_00233":null,"SJAG_00421":null,"SJAG_00526":null,"SJAG_00686":null,"SJAG_01179":null,"SJAG_01229":null,"SJAG_01317":null,"SJAG_01356":null,"SJAG_01438":null,"SJAG_01466":null,"SJAG_02084":null,"SJAG_02119":null,"SJAG_02196":null,"SJAG_02377":null,"SJAG_02518":null,"SJAG_02716":null,"SJAG_02885":null,"SJAG_03052":null,"SJAG_03345":null,"SJAG_03692":null,"SJAG_03712":null,"SJAG_03866":null,"SJAG_04489":null,"SJAG_04757":null,"SJAG_05277":null,"SJAG_05332":null,"SJAG_16459":null},"genotype_count":0,"in_subsets":["pombe_mondo_slim"],"is_obsolete":false,"name":"cognitive disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C92196","DOID:1561","MEDGEN:40371","MESH:D019965","SCTID:443265004","UMLS:C0009241","ICD9:294.9"],"synonyms":[{"name":"cognitive disease","type":"exact"},{"name":"cognitive disorder","type":"exact"},{"name":"organic mental disorder","type":"related"}],"termid":"MONDO:0002039","terms_by_termid":{"MONDO:0005090":null,"MONDO:0007574":null,"MONDO:0008083":null,"MONDO:0008178":null,"MONDO:0008458":null,"MONDO:0008695":null,"MONDO:0008767":null,"MONDO:0010476":null,"MONDO:0010936":null,"MONDO:0011330":null,"MONDO:0011397":null,"MONDO:0011439":null,"MONDO:0011706":null,"MONDO:0011781":null,"MONDO:0012246":null,"MONDO:0012450":null,"MONDO:0013501":null,"MONDO:0013584":null,"MONDO:0013594":null,"MONDO:0013886":null,"MONDO:0014290":null,"MONDO:0014417":null,"MONDO:0014628":null,"MONDO:0014934":null,"MONDO:0016163":null,"MONDO:0033482":null},"xrefs":{"Monarch":{"xref_id":"0002039"}}}


id: GO:0052919
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aliphatic (R)-hydroxynitrile = an aliphatic aldehyde or ketone + hydrogen cyanide.","definition_xrefs":["EC:4.1.2.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aliphatic (R)-hydroxynitrile lyase activity","synonyms":[{"name":"(R)-HNL activity","type":"broad"},{"name":"(R)-hydroxynitrile lyase activity","type":"broad"},{"name":"(R)-oxynitrilase activity","type":"broad"}],"termid":"GO:0052919"}


id: SO:0001563
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where copies of a feature (CNV) are either increased or decreased.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_length_variant","termid":"SO:0002160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copy_number_change","synonyms":[{"name":"copy number change","type":"exact"}],"termid":"SO:0001563"}


id: FYPO:0001856
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a normal (i.e. indistinguishable from wild type) extent when the cell is subject to iron ion starvation. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription during vegetative growth","termid":"FYPO:0001855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal transcription during iron starvation","synonyms":[{"name":"normal transcription during iron depletion","type":"exact"},{"name":"normal transcription during iron deprivation","type":"exact"},{"name":"normal transcription during iron ion starvation","type":"exact"},{"name":"normal transcription during iron starvation during mitotic cell cycle","type":"related"},{"name":"normal transcription during iron starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0001856"}


id: GO:0047896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-xylulose 5-phosphate + formaldehyde = glyceraldehyde 3-phosphate + glycerone.","definition_xrefs":["EC:2.2.1.3","MetaCyc:FORMALDEHYDE-TRANSKETOLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transketolase or transaldolase activity","termid":"GO:0016744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016744"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016744","GO:0016740"],"is_obsolete":false,"name":"formaldehyde transketolase activity","secondary_identifiers":["RHEA:24264"],"synonyms":[{"name":"D-xylulose-5-phosphate:formaldehyde glycolaldehydetransferase activity","type":"related"},{"name":"DHAS activity","type":"related"},{"name":"dihydroxyacetone synthase activity","type":"related"},{"name":"glycerone synthase activity","type":"related"}],"termid":"GO:0047896"}


id: MONDO:0035943
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"B-lymphoblastic leukemia/lymphoma with recurrent genetic abnormality","termid":"MONDO:0035605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"B-lymphoblastic leukemia/lymphoma with hyperdiploidy","secondary_identifiers":["MEDGEN:397154","DOID:0080646","UMLS:C2698311","Orphanet:585936","NCIT:C80335","GARD:22345"],"termid":"MONDO:0035943","xrefs":{"Monarch":{"xref_id":"0035943"}}}


id: PBO:0042900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor H related 4","termid":"PBO:0042900"}


id: GO:0140466
data:
  {"annotated_genes":["SJAG_02457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88751],"is_not":false,"summary":null,"term":"GO:0140466"}]},"cv_name":"biological_process","definition":"The directed movement of iron sulfur clusters from inside the mitochondrion into the cytosol by crossing the inner mitochondrial membrane.","definition_xrefs":["PMID:31040179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster transmembrane transport","termid":"GO:1902497"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"iron-sulfur cluster export from the mitochondrion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140466","terms_by_termid":{"GO:0140466":null}}


id: MONDO:0020380
data:
  {"annotated_genes":["SJAG_00421","SJAG_02196","SJAG_00686","SJAG_05332","SJAG_00087","SJAG_00526","SJAG_01356","SJAG_01179","SJAG_02119","SJAG_02084","SJAG_02377","SJAG_03692","SJAG_02885","SJAG_01438","SJAG_01317"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016163"},{"annotations":[86283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011397"},{"annotations":[85658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013886"},{"annotations":[85484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033482"},{"annotations":[85171],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011330"},{"annotations":[84734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011439"},{"annotations":[85249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011781"},{"annotations":[86752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008458"},{"annotations":[84687,84686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012246"},{"annotations":[84672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012450"},{"annotations":[85133,85134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007574"},{"annotations":[85329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013594"},{"annotations":[85778,85779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014417"},{"annotations":[86642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014934"}]},"cv_name":"mondo","definition":"A clinically and genetically heterogeneous group of neurodegenerative diseases characterized by a slowly progressive ataxia of gait, stance and limbs, dysarthria and/or oculomotor disorder, due to cerebellar degeneration in the absence of coexisting diseases. The degenerative process can be limited to the cerebellum (ADCA type 3) or may additionally involve the retina (ADCA type 2), optic nerve, ponto-medullary systems, basal ganglia, cerebral cortex, spinal tracts or peripheral nerves (ADCA type 1). In ACDA type 4, a cerebellar syndrome is associated with epilepsy.","definition_xrefs":["Orphanet:99"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cerebellar ataxia","termid":"MONDO:0000437"},{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"excluded_subClassOf","term_name":"hereditary ataxia","termid":"MONDO:0100309"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"is_a","term_name":"cerebellar degeneration","termid":"MONDO:0022687"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"},{"relation_name":"is_a","term_name":"hereditary cerebellar ataxia","termid":"MONDO:0100310"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00421":null,"SJAG_00526":null,"SJAG_00686":null,"SJAG_01179":null,"SJAG_01317":null,"SJAG_01356":null,"SJAG_01438":null,"SJAG_02084":null,"SJAG_02119":null,"SJAG_02196":null,"SJAG_02377":null,"SJAG_02885":null,"SJAG_03692":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"autosomal dominant cerebellar ataxia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:4346","OMIMPS:164400","UMLS:C4087347","ICD9:334.3","DOID:1441","MEDGEN:1684639","NORD:825","SCTID:129609000"],"synonyms":[{"name":"ADCA","type":"exact"},{"name":"Autosomal Dominant Hereditary Ataxia","type":"exact"},{"name":"Pierre Marie cerebellar ataxia (formerly)","type":"related"},{"name":"SCA","type":"broad"},{"name":"autosomal dominant spinocerebellar ataxia","type":"exact"},{"name":"cerebellar ataxia, autosomal dominant","type":"exact"},{"name":"spinocerebellar ataxia","type":"broad"}],"termid":"MONDO:0020380","terms_by_termid":{"MONDO:0007574":null,"MONDO:0008458":null,"MONDO:0011330":null,"MONDO:0011397":null,"MONDO:0011439":null,"MONDO:0011781":null,"MONDO:0012246":null,"MONDO:0012450":null,"MONDO:0013594":null,"MONDO:0013886":null,"MONDO:0014417":null,"MONDO:0014934":null,"MONDO:0016163":null,"MONDO:0033482":null},"xrefs":{"Monarch":{"xref_id":"0020380"}}}


id: MONDO:0015410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cysts and fistulae of the face and oral cavity","termid":"MONDO:0015476"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasal dorsum fistula/cyst","secondary_identifiers":["MEDGEN:573381","UMLS:C0339853","Orphanet:141219","GARD:19963"],"termid":"MONDO:0015410","xrefs":{"Monarch":{"xref_id":"0015410"}}}


id: MONDO:0009604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary methemoglobinemia","termid":"MONDO:0018963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"methemoglobin reductase deficiency","secondary_identifiers":["MESH:C563171","UMLS:C0472786","GARD:3909","MEDGEN:501116","SCTID:234397008","OMIM:250700"],"synonyms":[{"name":"NADPH-dependent methemoglobin reductase deficiency","type":"related"},{"name":"TPNH-methemoglobin reductase deficiency","type":"related"},{"name":"methemoglobin reductase deficiency","type":"exact"}],"termid":"MONDO:0009604","xrefs":{"Monarch":{"xref_id":"0009604"}}}


id: FYPO:0004186
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing myriocin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002057","FYPO:0000003","FYPO:0000139","FYPO:0000257","FYPO:0002060"],"is_obsolete":false,"name":"normal vegetative growth on myriocin","synonyms":[{"name":"normal cellular response to myriocin during vegetative growth","type":"related"},{"name":"normal vegetative cell population growth in presence of myriocin","type":"exact"},{"name":"normal vegetative cell population growth on myriocin","type":"exact"},{"name":"normal vegetative growth on myriocin during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004186"}


id: RO:0000059
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between a specifically dependent continuant and a generically dependent continuant, in which the generically dependent continuant depends on some independent continuant in virtue of the fact that the specifically dependent continuant also depends on that same independent continuant. Multiple specifically dependent continuants can concretize the same generically dependent continuant.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"concretizes","termid":"RO:0000059"}


id: GO:0061256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mesonephric glomerular visceral epithelial cell. A mesonephric glomerular visceral epithelial cell is a specialized epithelial cell that contains 'feet' that interdigitate with the 'feet' of other glomerular epithelial cells in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric glomerular epithelial cell differentiation","termid":"GO:0061250"},{"relation_name":"is_a","term_name":"podocyte differentiation","termid":"GO:0072112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric podocyte differentiation","synonyms":[{"name":"mesonephric glomerular visceral epithelial cell differentiation","type":"exact"}],"termid":"GO:0061256"}


id: PBO:0086664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by expression profiling and mass spectrometry","termid":"PBO:0086664"}


id: PBO:0054238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1620","termid":"PBO:0054238"}


id: PBO:0041618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium binding protein 4","termid":"PBO:0041618"}


id: MONDO:0032873
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"RPE65-related dominant retinopathy","termid":"MONDO:0100452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0000426","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 87 with choroidal involvement","secondary_identifiers":["GARD:16374","MEDGEN:1684667","OMIM:618697","UMLS:C5231465"],"synonyms":[{"name":"RETINITIS PIGMENTOSA 87 WITH CHOROIDAL INVOLVEMENT","type":"related"},{"name":"RP87","type":"related"}],"termid":"MONDO:0032873","xrefs":{"Monarch":{"xref_id":"0032873"}}}


id: FYECO:0000218
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which beta-estradiol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ beta-estradiol","termid":"FYECO:0000218"}


id: GO:0090460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of threonine within a cell.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular amino acid homeostasis","termid":"GO:0080144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular threonine homeostasis","synonyms":[{"name":"cellular threonine homeostasis","type":"exact"},{"name":"threonine homeostasis","type":"exact"}],"termid":"GO:0090460"}


id: MONDO:0022394
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dysplasia of cervix","termid":"MONDO:0006736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical intraepithelial neoplasia","secondary_identifiers":["GARD:9244","SCTID:285636001","NCIT:C3782","UMLS:C0206708","MEDGEN:60214"],"synonyms":[{"name":"Cervical Dysplasia","type":"related"},{"name":"Cervical Intraepithelial Neoplasia","type":"related"},{"name":"Cervical Intraepithelial Neoplasm","type":"related"},{"name":"Cervical Intraepithelial Neoplasms","type":"related"},{"name":"Cervical intraepithelial neoplasia","type":"related"},{"name":"Cervix Intraepithelial Neoplasia","type":"related"},{"name":"Cervix Uteri Intraepithelial Neoplasia","type":"related"},{"name":"Intraepithelial Neoplasia of Cervix","type":"related"},{"name":"Intraepithelial Neoplasia of Cervix Uteri","type":"related"},{"name":"Intraepithelial Neoplasia of Uterine Cervix","type":"related"},{"name":"Intraepithelial Neoplasia of the Cervix","type":"related"},{"name":"Intraepithelial Neoplasia of the Cervix Uteri","type":"related"},{"name":"Intraepithelial Neoplasia of the Uterine Cervix","type":"related"},{"name":"Intraepithelial Neoplasia, Cervical","type":"related"},{"name":"Intraepithelial Neoplasm, Cervical","type":"related"},{"name":"Intraepithelial Neoplasms, Cervical","type":"related"},{"name":"NEOPL CERVICAL INTRAEPITHELIAL","type":"related"},{"name":"Neoplasia, Cervical Intraepithelial","type":"related"},{"name":"Neoplasm, Cervical Intraepithelial","type":"related"},{"name":"Neoplasms, Cervical Intraepithelial","type":"related"},{"name":"Uterine Cervix Intraepithelial Neoplasia","type":"related"}],"termid":"MONDO:0022394","xrefs":{"Monarch":{"xref_id":"0022394"}}}


id: MONDO:0013697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 29","secondary_identifiers":["DOID:0081192","MEDGEN:482155","GARD:22554","OMIM:614333","UMLS:C3280525"],"synonyms":[{"name":"MRT29","type":"exact"},{"name":"intellectual disability, autosomal recessive 29","type":"exact"},{"name":"mental retardation, autosomal recessive 29","type":"related"}],"termid":"MONDO:0013697","xrefs":{"Monarch":{"xref_id":"0013697"}}}


id: MONDO:0019940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypertrichosis-acromegaloid facial appearance syndrome (HAFF) is a very rare multiple congenital abnormality syndrome manifesting from birth with progressive hypertrichosis congenita terminalis (thick scalp hair extending onto the forehead with generalized increased body hair) associated with a typical acromegaloid facial appearance (thick eyebrows, prominent supraorbital ridges, broad nasal bridge, anteverted nares, long and large philtrum, and prominent mouth with full lips) appearing during childhood. HAFF seems to belong to a spectrum of phenotypes with the clinically overlapping acromegaloid facial appearance syndrome and hypertrichotic osteochondrodysplasia, CantC9 type.","definition_xrefs":["Orphanet:966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"hypertrichosis","termid":"MONDO:0019280"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrichosis-acromegaloid facial appearance syndrome","secondary_identifiers":["GARD:502","SCTID:721837000"],"synonyms":[{"name":"acromegaloid facial appearance syndrome and hypertrichosis","type":"related"},{"name":"acromegaloid hypertrichosis syndrome","type":"related"},{"name":"haff","type":"exact"},{"name":"hypertrichosis-acromegaloid facial features syndrome","type":"exact"},{"name":"hypertrichosis-coarse face syndrome","type":"exact"}],"termid":"MONDO:0019940","xrefs":{"Monarch":{"xref_id":"0019940"}}}


id: PBO:0031750
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_methylation","termid":"PBO:0031750"}


id: MONDO:0020332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Systemic mastocytosis with an associated clonal hematological non-mast cell lineage disease is a form of systemic mastocytosis (SM) associated with malignancy (other than mast cell leukemia).","definition_xrefs":["Orphanet:98849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"systemic mastocytosis","termid":"MONDO:0016586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"systemic mastocytosis with an associated clonal hematologic non-mast cell lineage disease","secondary_identifiers":["GARD:19596","ICDO:9741/3","MEDGEN:226985","ONCOTREE:SMAHN","DOID:4797","NCIT:C9284","SCTID:397015000","UMLS:C1301365","EFO:1000559"],"synonyms":[{"name":"SM-AHN","type":"exact"},{"name":"SM-AHNMD","type":"exact"},{"name":"SMAHN","type":"exact"},{"name":"systemic mastocytosis with an associated haematological neoplasm","type":"exact"},{"name":"systemic mastocytosis with an associated haematological neoplasm (SM-AHN)","type":"exact"},{"name":"systemic mastocytosis with an associated hematological neoplasm","type":"exact"},{"name":"systemic mastocytosis with an associated hematological neoplasm (SM-AHN)","type":"exact"},{"name":"systemic mastocytosis with associated clonal haematological non-mast cell lineage disease","type":"exact"},{"name":"systemic mastocytosis with associated clonal haematological non-mast-cell lineage disease","type":"exact"},{"name":"systemic mastocytosis with associated clonal hematological non-mast cell lineage disease","type":"exact"},{"name":"systemic mastocytosis with associated clonal hematological non-mast-cell lineage disease","type":"exact"},{"name":"systemic mastocytosis with associated clonal, hematologic non-mast-cell lineage disease","type":"exact"},{"name":"systemic mastocytosis with associated clonal, hematologic non-mast-cell lineage disease (morphologic abnormality)","type":"exact"},{"name":"systemic mastocytosis with associated hematologic neoplasm","type":"exact"}],"termid":"MONDO:0020332","xrefs":{"Monarch":{"xref_id":"0020332"}}}


id: PBO:0051743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INTS9 antisense RNA 1","termid":"PBO:0051743"}


id: FYPO:0007523
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to oxidative stress is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah","PMID:19625445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"decreased protein level during cellular response to oxidative stress","synonyms":[{"name":"decreased protein accumulation during cellular response to oxidative stress","type":"exact"},{"name":"decreased protein level during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to oxidative stress","type":"exact"}],"termid":"FYPO:0007523"}


id: MONDO:0008220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pepsinogen 3, group 1 (obsolete MONDO:0008220)","secondary_identifiers":["OMIM:169710"],"synonyms":[{"name":"PGA3","type":"related"},{"name":"pepsinogen 3, Group type 1","type":"exact"},{"name":"pepsinogen 3, group I","type":"related"},{"name":"pepsinogen I--second locus","type":"related"}],"termid":"MONDO:0008220","xrefs":{"Monarch":{"xref_id":"0008220"}}}


id: MONDO:0006023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0006023 (obsolete MONDO:0006023)","termid":"MONDO:0006023","xrefs":{"Monarch":{"xref_id":"0006023"}}}


id: PBO:0067376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 478, pseudogene","termid":"PBO:0067376"}


id: PBO:0001364
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.78","termid":"PBO:0001364"}


id: SO:0000726
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The simplest repeated component of a repeat region. A single repeat.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repeat_unit","secondary_identifiers":["http://www.insdc.org/files/feature_table.html"],"synonyms":[{"name":"repeat unit","type":"exact"}],"termid":"SO:0000726"}


id: PBO:0044549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"death associated protein kinase 1","termid":"PBO:0044549"}


id: PBO:0060436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NACA pseudogene 5","termid":"PBO:0060436"}


id: PBO:0055055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2471","termid":"PBO:0055055"}


id: MONDO:0019012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extremely rare autosomal recessive syndrome characterized by premature closure of cranial sutures leading to cone-shaped head, fusion of the digits, and the presence of more digits than normal. It may be associated with heart defects, single horseshoe-shaped kidney, short stature, undescended testes, and mild mental retardation.","definition_xrefs":["NCIT:C98873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acrocephalopolysyndactyly","termid":"MONDO:0000078"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Carpenter syndrome","secondary_identifiers":["GARD:6003","NORD:897","icd11.foundation:2132713612","OMIMPS:201000","SCTID:83728000","NANDO:2200847","UMLS:C1275078","Orphanet:65759","DOID:0060234","SCTID:403767009","MEDGEN:226897"],"synonyms":[{"name":"ACPS2","type":"exact"},{"name":"Carpenter 's syndrome","type":"exact"},{"name":"Carpenter syndrome","type":"exact"},{"name":"acrocephalopolysyndactyly type 2","type":"exact"},{"name":"acrocephalopolysyndactyly type II","type":"exact"},{"name":"acrocephalosyndactyly, type II","type":"related"},{"name":"type II Acrocephalopolysyndactyly","type":"exact"}],"termid":"MONDO:0019012","xrefs":{"Monarch":{"xref_id":"0019012"}}}


id: PBO:0050766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 28","termid":"PBO:0050766"}


id: PBO:0080226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"viral integration site 1","termid":"PBO:0080226"}


id: MONDO:0015594
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-paraneoplastic limbic encephalitis (obsolete MONDO:0015594)","secondary_identifiers":["Orphanet:163918"],"termid":"MONDO:0015594","xrefs":{"Monarch":{"xref_id":"0015594"}}}


id: MONDO:0968951
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary renal hypouricemia","termid":"MONDO:0009071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"hypouricemia, renal","secondary_identifiers":["OMIMPS:220150"],"termid":"MONDO:0968951","xrefs":{"Monarch":{"xref_id":"0968951"}}}


id: PBO:0062568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily AG member 1","termid":"PBO:0062568"}


id: GO:0016734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 8 reduced ferredoxin + 8 H+ + N2 + 16 ATP = 8 oxidized ferredoxin + 2 NH3 + 16 ADP + 16 phosphate.","definition_xrefs":["EC:1.18.6.1"],"gene_count":0,"genotype_count":0,"name":"obsolete molybdenum-iron nitrogenase activity (obsolete GO:0016734)","synonyms":[{"name":"molybdenum-iron nitrogenase activity","type":"exact"}],"termid":"GO:0016734"}


id: MONDO:0002167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant melanocytic neoplasm that arises from the rectum.","definition_xrefs":["NCIT:C4640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectal cancer","termid":"MONDO:0006519"},{"relation_name":"is_a","term_name":"digestive system melanoma","termid":"MONDO:0045070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"rectum malignant melanoma","secondary_identifiers":["UMLS:C0349539","SCTID:276822007","MEDGEN:87605","DOID:1992"],"synonyms":[{"name":"malignant melanoma of rectum","type":"exact"},{"name":"malignant melanoma of the rectum","type":"exact"},{"name":"melanoma (disease) of rectum","type":"exact"},{"name":"melanoma of rectum","type":"exact"},{"name":"melanoma of the rectum","type":"exact"},{"name":"rectal malignant melanoma","type":"exact"},{"name":"rectal melanoma","type":"exact"},{"name":"rectum melanoma","type":"exact"},{"name":"rectum melanoma (disease)","type":"exact"}],"termid":"MONDO:0002167","xrefs":{"Monarch":{"xref_id":"0002167"}}}


id: PBO:0028782
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transposable_element-derived_small_RNA_level","termid":"PBO:0028782"}


id: PBO:0047515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FEV transcription factor, ETS family member","termid":"PBO:0047515"}


id: PBO:0056360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 3","termid":"PBO:0056360"}


id: GO:0009220
data:
  {"annotated_genes":["SJAG_04713","SJAG_02887","SJAG_00694","SJAG_00779","SJAG_04354","SJAG_05024","SJAG_04709","SJAG_00964","SJAG_03164","SJAG_00444","SJAG_03708","SJAG_00197","SJAG_00533"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[88928,97997,92898,116214,111404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[115074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[67456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[99568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[92449,114408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[115075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[92450,114410,87927,86942,91455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"},{"annotations":[99570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a pyrimidine ribonucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide biosynthetic process","termid":"GO:0006221"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide metabolic process","termid":"GO:0009218"},{"relation_name":"is_a","term_name":"ribonucleotide biosynthetic process","termid":"GO:0009260"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00444":null,"SJAG_00533":null,"SJAG_00694":null,"SJAG_00779":null,"SJAG_00964":null,"SJAG_02887":null,"SJAG_03164":null,"SJAG_03708":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"pyrimidine ribonucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["MetaCyc:PWY0-162"],"synonyms":[{"name":"pyrimidine ribonucleotide anabolism","type":"exact"},{"name":"pyrimidine ribonucleotide biosynthesis","type":"exact"},{"name":"pyrimidine ribonucleotide formation","type":"exact"},{"name":"pyrimidine ribonucleotide synthesis","type":"exact"}],"termid":"GO:0009220","terms_by_termid":{"GO:0006225":null,"GO:0006228":null,"GO:0006241":null,"GO:0009224":null,"GO:0044205":null,"GO:0044206":null,"GO:0044210":null,"GO:0044211":null,"GO:0046705":null}}


id: PBO:0024473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor family, glycerophospholipid-transfer protein Spo20/Sec14","termid":"PBO:0024473"}


id: PBO:0084224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp70 protein that interacts with Zuo1p (a DnaJ homolog); interacts with Zuo1p to form a ribosome-associated complex that binds the ribosome via the Zuo1p subunit; also involved in pleiotropic drug resistance via sequential activation of PDR1 and PDR5; binds ATP","termid":"PBO:0084224"}


id: PBO:0083853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; predicted to contain both S1 and KH RNA binding domains; mutations in the human homolog, EXOSC3, cause pontocerebellar hypoplasia with motor neuron degeneration","termid":"PBO:0083853"}


id: GO:0031266
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed upon binding of TRAIL to its ligand. The complex includes FADD/Mort1 and procaspase-8 addition to the ligand-bound receptor.","definition_xrefs":["PMID:12628743","PMID:12655293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"death-inducing signaling complex","termid":"GO:0031264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"TRAIL death-inducing signaling complex","synonyms":[{"name":"TRAIL DISC","type":"exact"},{"name":"TRAIL death-inducing signalling complex","type":"exact"}],"termid":"GO:0031266"}


id: PBO:0043814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copine 5","termid":"PBO:0043814"}


id: PBO:0038412
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-acts_upstream_of,_positive_effect","termid":"PBO:0038412"}


id: MONDO:0011695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"uveal melanoma","termid":"MONDO:0006486"},{"relation_name":"is_a","term_name":"susceptibility to uveal melanoma","termid":"MONDO:0007966"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoma, uveal, susceptibility to, 1","secondary_identifiers":["MEDGEN:376198","UMLS:C1847724","OMIM:606660"],"synonyms":[{"name":"UVM1","type":"exact"},{"name":"melanoma, uveal, susceptibility to, 1","type":"exact"},{"name":"melanoma, uveal, susceptibility to, type 1","type":"exact"}],"termid":"MONDO:0011695","xrefs":{"Monarch":{"xref_id":"0011695"}}}


id: PBO:0018260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyphosphate synthetase, VTC complex subunit Vtc2/3 (predicted)","termid":"PBO:0018260"}


id: PBO:0074891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 66","termid":"PBO:0074891"}


id: MONDO:0044907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma which has spread from its original site of growth to another anatomic site.","definition_xrefs":["NCIT:C4104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"metastatic carcinoma","termid":"MONDO:0024879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"metastatic squamous cell carcinoma","secondary_identifiers":["MEDGEN:90749","SCTID:403906006","UMLS:C0334246"],"synonyms":[{"name":"Metastatic squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0044907","xrefs":{"Monarch":{"xref_id":"0044907"}}}


id: PBO:0075289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 29 pseudogene 2","termid":"PBO:0075289"}


id: FYPO:0005480
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to arsenite ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during cellular hyperosmotic response","termid":"FYPO:0001265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0002274","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"increased protein phosphorylation during cellular response to arsenite ion","synonyms":[{"name":"increased protein phosphorylation during cellular response to arsenite","type":"exact"},{"name":"increased protein phosphorylation during cellular response to arsenite ion during mitotic cell cycle","type":"related"},{"name":"increased protein phosphorylation during cellular response to arsenite ion during vegetative growth","type":"exact"}],"termid":"FYPO:0005480"}


id: PBO:0061692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 210 like","termid":"PBO:0061692"}


id: PBO:0049982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIKESHI pseudogene 3","termid":"PBO:0049982"}


id: GO:0036432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + undecaprenol + all-trans-undecaprenyl phosphate + ADP + H+.","definition_xrefs":["RHEA:23752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undecaprenol kinase activity","termid":"GO:0009038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"all-trans undecaprenol kinase activity","termid":"GO:0036432"}


id: PBO:0056638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MED14 opposite strand","termid":"PBO:0056638"}


id: MONDO:0009631
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A microphthalmia that has material basis in variation in the chromosomal region 14q32.","definition_xrefs":["PMID:9545413","DOID:0060840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated microphthalmia","termid":"MONDO:0000062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated microphthalmia 1","secondary_identifiers":["MEDGEN:381546","UMLS:C1855052","OMIM:251600","MESH:C565377"],"synonyms":[{"name":"MCOP1","type":"exact"},{"name":"Mcop","type":"related"},{"name":"anophthalmia, clinical, isolated","type":"related"},{"name":"isolated microphthalmia type 1","type":"exact"},{"name":"microphthalmia, isolated 1","type":"related"},{"name":"microphthalmos, autosomal recessive","type":"related"}],"termid":"MONDO:0009631","xrefs":{"Monarch":{"xref_id":"0009631"}}}


id: PBO:0041187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin like 12, pseudogene","termid":"PBO:0041187"}


id: PR:O94279
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A magnesium-dependent phosphatase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03815","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"magnesium-dependent phosphatase P8B7.31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.31","secondary_identifiers":["UniProtKB:O94279"],"synonyms":[{"name":"Spom972h-MDP1","type":"exact"}],"termid":"PR:O94279"}


id: GO:0047452
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protoaphin aglucone = H2O + xanthoaphin.","definition_xrefs":["EC:4.2.1.73","RHEA:23876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"protoaphin-aglucone dehydratase (cyclizing) activity","secondary_identifiers":["KEGG_REACTION:R03742","MetaCyc:4.2.1.73-RXN"],"synonyms":[{"name":"protoaphin dehydratase (cyclizing)","type":"related"},{"name":"protoaphin dehydratase activity","type":"related"},{"name":"protoaphin-aglucone hydro-lyase (cyclizing)","type":"related"},{"name":"protoaphin-aglucone hydro-lyase (cyclizing; xanthoaphin-forming)","type":"related"}],"termid":"GO:0047452"}


id: PBO:0058804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7846","termid":"PBO:0058804"}


id: GO:0140244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates translation occurring at the presynapse.","definition_xrefs":["PMID:20427644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation at synapse","termid":"GO:0140243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of translation at presynapse","termid":"GO:0140244"}


id: GO:0002602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antigen processing and presentation of polysaccharide antigen via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002581"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","termid":"GO:0002601"},{"relation_name":"negatively_regulates","term_name":"antigen processing and presentation of polysaccharide antigen via MHC class II","termid":"GO:0002505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","synonyms":[{"name":"down regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"exact"},{"name":"down-regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"exact"},{"name":"downregulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"exact"},{"name":"inhibition of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"narrow"},{"name":"negative regulation of polysaccharide antigen processing and presentation via MHC class II","type":"exact"}],"termid":"GO:0002602"}


id: FYPO:0005923
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of the histone variant H2A.Z found associated with chromatin in subtelomeric regions is higher than normal when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah","PMID:21437270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level in chromatin","termid":"FYPO:0005893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"increased H2A.Z level at subtelomere","synonyms":[{"name":"H2A.Z accumulation at subtelomere","type":"exact"},{"name":"increased H2A.Z level at subtelomere during mitotic cell cycle","type":"related"},{"name":"increased H2A.Z level at subtelomere during vegetative growth","type":"exact"},{"name":"increased H2A.Z level in chromatin at subtelomere","type":"exact"}],"termid":"FYPO:0005923"}


id: PBO:0049361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 20","termid":"PBO:0049361"}


id: FYPO:0002690
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing cumene hydroperoxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000257","FYPO:0002058","FYPO:0002060","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on cumene hydroperoxide","synonyms":[{"name":"normal cell population growth in presence of cumene hydroperoxide","type":"exact"},{"name":"normal cell population growth on cumene hydroperoxide","type":"exact"},{"name":"normal cellular response to cumene hydroperoxide","type":"related"},{"name":"normal vegetative cell population growth on cumene hydroperoxide","type":"exact"}],"termid":"FYPO:0002690"}


id: PBO:0076114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STX18 intronic transcript 1","termid":"PBO:0076114"}


id: FYPO:0001811
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 5-phosphoribosyl diphosphate measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"altered 5-phosphoribosyl diphosphate level","synonyms":[{"name":"abnormal 5-phosphoribosyl diphosphate level","type":"exact"},{"name":"altered 5-O-phosphono-alpha-D-ribofuranosyl diphosphate level","type":"exact"},{"name":"altered 5-phosphoribosyl diphosphate level during mitotic cell cycle","type":"related"},{"name":"altered 5-phosphoribosyl diphosphate level during vegetative growth","type":"exact"},{"name":"altered cellular 5-phosphoribosyl diphosphate level","type":"exact"}],"termid":"FYPO:0001811"}


id: PBO:0079107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSC22 domain family member 2","termid":"PBO:0079107"}


id: PBO:0086978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of the type 1 protein phosphatase (PP1) Glc7p; whether it functions as a positive or negative regulator of Glc7p is controversial; involved in the regulation of Glc7p nuclear localization and function","termid":"PBO:0086978"}


id: GO:0051285
data:
  {"annotated_genes":["SJAG_00805","SJAG_00845","SJAG_00152","SJAG_04781","SJAG_04509","SJAG_01787","SJAG_00661","SJAG_04001","SJAG_03011","SJAG_02166","SJAG_03453","SJAG_03379","SJAG_04620","SJAG_00851","SJAG_00104","SJAG_02241","SJAG_04776","SJAG_03748","SJAG_01114","SJAG_02838","SJAG_03625","SJAG_00514","SJAG_03581","SJAG_03637","SJAG_02045","SJAG_00397","SJAG_03126","SJAG_02169","SJAG_04322","SJAG_01456","SJAG_04901","SJAG_01925","SJAG_02379","SJAG_04703","SJAG_04771","SJAG_04724","SJAG_04982","SJAG_02392","SJAG_02695","SJAG_04690","SJAG_03486","SJAG_01167","SJAG_04765","SJAG_02087","SJAG_01268","SJAG_00140","SJAG_00800","SJAG_01453","SJAG_01855","SJAG_04666","SJAG_00030","SJAG_01118","SJAG_01964","SJAG_02222","SJAG_05285","SJAG_02368","SJAG_01360","SJAG_00216","SJAG_01448","SJAG_01196","SJAG_02989","SJAG_01738","SJAG_03705","SJAG_02320","SJAG_00268","SJAG_03655","SJAG_00700"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86989,87005,87351,87528,87622,87936,88806,89327,90220,90242,90316,90545,90857,91383,93039,93338,94053,94682,94844,94892,95326,95753,95789,96346,96456,97209,98332,98476,98814,99236,99392,99662,100423,102137,102157,102462,102745,102986,103191,103242,104137,105582,106336,106497,106521,107817,109591,110240,110348,110848,111143,111354,111788,112536,112567,113527,113643,115664,115972,117397,118125],"is_not":false,"summary":null,"term":"GO:0051285"},{"annotations":[89328,118126,112537,111434,91891,115973,96685,90221,113644,105583,118324,115302,110241,90192,87352,117398,94054,115665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902716"},{"annotations":[111435,117399,110242,100424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140472"}]},"cv_name":"cellular_component","definition":"The region directly beneath the plasma membrane at the cell tip. The cell tip is the region at either end of the longest axis of a cylindrical or elongated cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex region","termid":"GO:0099738"},{"relation_name":"part_of","term_name":"cell tip","termid":"GO:0051286"}],"gene_count":67,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00104":null,"SJAG_00140":null,"SJAG_00152":null,"SJAG_00216":null,"SJAG_00268":null,"SJAG_00397":null,"SJAG_00514":null,"SJAG_00661":null,"SJAG_00700":null,"SJAG_00800":null,"SJAG_00805":null,"SJAG_00845":null,"SJAG_00851":null,"SJAG_01114":null,"SJAG_01118":null,"SJAG_01167":null,"SJAG_01196":null,"SJAG_01268":null,"SJAG_01360":null,"SJAG_01448":null,"SJAG_01453":null,"SJAG_01456":null,"SJAG_01738":null,"SJAG_01787":null,"SJAG_01855":null,"SJAG_01925":null,"SJAG_01964":null,"SJAG_02045":null,"SJAG_02087":null,"SJAG_02166":null,"SJAG_02169":null,"SJAG_02222":null,"SJAG_02241":null,"SJAG_02320":null,"SJAG_02368":null,"SJAG_02379":null,"SJAG_02392":null,"SJAG_02695":null,"SJAG_02838":null,"SJAG_02989":null,"SJAG_03011":null,"SJAG_03126":null,"SJAG_03379":null,"SJAG_03453":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03625":null,"SJAG_03637":null,"SJAG_03655":null,"SJAG_03705":null,"SJAG_03748":null,"SJAG_04001":null,"SJAG_04322":null,"SJAG_04509":null,"SJAG_04620":null,"SJAG_04666":null,"SJAG_04690":null,"SJAG_04703":null,"SJAG_04724":null,"SJAG_04765":null,"SJAG_04771":null,"SJAG_04776":null,"SJAG_04781":null,"SJAG_04901":null,"SJAG_04982":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005938"],"is_obsolete":false,"name":"cell cortex of cell tip","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell cortex of cell end","type":"exact"}],"termid":"GO:0051285","terms_by_termid":{"GO:0051285":null,"GO:0140472":null,"GO:1902716":null}}


id: PBO:0074840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 33","termid":"PBO:0074840"}


id: PBO:0083799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein required for ribosomal large subunit biogenesis; associated with pre-60S ribosomal subunits; stimulates the ATPase activity of Afg2p, which is required for release of Rlp24p from the pre-60S particle; has similarity to Rpl24Ap and Rpl24Bp","termid":"PBO:0083799"}


id: PBO:0051399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda joining 7","termid":"PBO:0051399"}


id: MONDO:0043283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"silicosis","termid":"MONDO:0005960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silicosiderosis","secondary_identifiers":["UMLS:C0018929","icd11.foundation:273225437","MEDGEN:5480","MESH:C537337","GARD:8372","SCTID:34004002"],"synonyms":[{"name":"hematite miners' lung disease","type":"related"},{"name":"hematite pneumoconiosis","type":"related"},{"name":"iron miners lung","type":"related"},{"name":"siderosilicosis","type":"exact"},{"name":"silicosiderosis","type":"exact"}],"termid":"MONDO:0043283","xrefs":{"Monarch":{"xref_id":"0043283"}}}


id: GO:0010508
data:
  {"annotated_genes":["SJAG_04435","SJAG_02433","SJAG_04502","SJAG_05289","SJAG_04249","SJAG_04496","SJAG_05346","SJAG_00704","SJAG_00169","SJAG_01716","SJAG_01184","SJAG_02765","SJAG_05000","SJAG_03851","SJAG_00824"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93659,98378,98944,106889,109169,110448,111334,114076],"is_not":false,"summary":null,"term":"GO:0010508"},{"annotations":[108142,108052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000786"},{"annotations":[97114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901098"},{"annotations":[68420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903599"},{"annotations":[97499,105751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016239"},{"annotations":[88998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140501"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of autophagy. Autophagy is the process in which cells digest parts of their own cytoplasm.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"regulation of autophagy","termid":"GO:0010506"},{"relation_name":"positively_regulates","term_name":"autophagy","termid":"GO:0006914"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00704":null,"SJAG_00824":null,"SJAG_01184":null,"SJAG_01716":null,"SJAG_02433":null,"SJAG_02765":null,"SJAG_03851":null,"SJAG_04249":null,"SJAG_04435":null,"SJAG_04496":null,"SJAG_04502":null,"SJAG_05000":null,"SJAG_05289":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"positively_regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"positive regulation of autophagy","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0010508","terms_by_termid":{"GO:0010508":null,"GO:0016239":null,"GO:0140501":null,"GO:1901098":null,"GO:1903599":null,"GO:2000786":null}}


id: PBO:0075267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 20","termid":"PBO:0075267"}


id: PBO:0064487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase theta","termid":"PBO:0064487"}


id: GO:0045259
data:
  {"annotated_genes":["SJAG_05204","SJAG_00438","SJAG_MIT15","SJAG_00133","SJAG_07003","SJAG_MIT37","SJAG_00985","SJAG_04122","SJAG_00542","SJAG_02105","SJAG_03114","SJAG_02564","SJAG_00836","SJAG_02598","SJAG_03925","SJAG_00915","SJAG_MIT09"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88605,92332,92762,93350,94327,101315,102534,103152,103181,104498,107297,107390,108275,115341,118556,118562,118567],"is_not":false,"summary":null,"term":"GO:0045259"}]},"cv_name":"cellular_component","definition":"A proton-transporting two-sector ATPase complex that catalyzes the phosphorylation of ADP to ATP during oxidative phosphorylation. The complex comprises a membrane sector (F0) that carries out proton transport and a cytoplasmic compartment sector (F1) that catalyzes ATP synthesis by a rotational mechanism; the extramembrane sector (containing 3 a and 3 b subunits) is connected via the d-subunit to the membrane sector by several smaller subunits. Within this complex, the g and e subunits and the 9-12 c subunits rotate by consecutive 120 degree angles and perform parts of ATP synthesis. This movement is driven by the hydrogen ion electrochemical potential gradient.","definition_xrefs":["ISBN:0716743663","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting two-sector ATPase complex","termid":"GO:0016469"},{"relation_name":"is_a","term_name":"cation channel complex","termid":"GO:0034703"},{"relation_name":"is_a","term_name":"respiratory chain complex","termid":"GO:0098803"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_03114":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"proton-transporting ATP synthase complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0045255"],"synonyms":[{"name":"F1-F0 complex","type":"exact"},{"name":"hydrogen-translocating F-type ATPase complex","type":"exact"},{"name":"hydrogen-transporting ATP synthase complex","type":"exact"},{"name":"proton-transporting F-type ATPase complex","type":"related"}],"termid":"GO:0045259","terms_by_termid":{"GO:0045259":null}}


id: PBO:0005132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Rix1 (predicted)","termid":"PBO:0005132"}


id: GO:0090619
data:
  {"annotated_genes":["SJAG_01546","SJAG_03915","SJAG_02368","SJAG_04745","SJAG_01805","SJAG_02320","SJAG_05196","SJAG_02241","SJAG_01464","SJAG_01613"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90769,93269,93342,94248,96251,98709,99399,102309,106582,118330],"is_not":false,"summary":null,"term":"GO:0090619"}]},"cv_name":"cellular_component","definition":"Either of the ends of a meiotic spindle, a spindle that forms as part of meiosis, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules.","definition_xrefs":["GOC:ha","PMID:18250200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole","termid":"GO:0000922"},{"relation_name":"part_of","term_name":"meiotic spindle","termid":"GO:0072687"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01464":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01805":null,"SJAG_02241":null,"SJAG_02320":null,"SJAG_02368":null,"SJAG_03915":null,"SJAG_04745":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"meiotic spindle pole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090619","terms_by_termid":{"GO:0090619":null}}


id: PBO:0031870
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in Fungi","termid":"PBO:0031870"}


id: GO:0009898
data:
  {"annotated_genes":["SJAG_01774","SJAG_00368","SJAG_04026","SJAG_03596","SJAG_02233","SJAG_04509","SJAG_01242","SJAG_01738","SJAG_02392","SJAG_02989","SJAG_04077","SJAG_01114","SJAG_02605","SJAG_05207","SJAG_02444","SJAG_03081","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87357,87426,89203,91893,92061,98477,101921,103226,106075,106525,110351],"is_not":false,"summary":null,"term":"GO:0009898"},{"annotations":[106076,95329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106186"},{"annotations":[110028],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031234"},{"annotations":[93710,106622,105983,108498],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005834"}]},"cv_name":"cellular_component","definition":"The leaflet the plasma membrane that faces the cytoplasm and any proteins embedded or anchored in it or attached to its surface.","definition_xrefs":["GOC:tb","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of membrane","termid":"GO:0098562"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00368":null,"SJAG_01114":null,"SJAG_01242":null,"SJAG_01738":null,"SJAG_01774":null,"SJAG_02233":null,"SJAG_02392":null,"SJAG_02444":null,"SJAG_02605":null,"SJAG_02989":null,"SJAG_03081":null,"SJAG_03596":null,"SJAG_04026":null,"SJAG_04077":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"cytoplasmic side of plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"internal leaflet of plasma membrane","type":"exact"},{"name":"internal side of plasma membrane","type":"exact"},{"name":"juxtamembrane","type":"broad"}],"termid":"GO:0009898","terms_by_termid":{"GO:0005834":null,"GO:0009898":null,"GO:0031234":null,"GO:0106186":null}}


id: GO:1904592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein refolding.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11360998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein refolding","termid":"GO:0061083"},{"relation_name":"is_a","term_name":"positive regulation of protein folding","termid":"GO:1903334"},{"relation_name":"positively_regulates","term_name":"protein refolding","termid":"GO:0042026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006457"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006457"}],"interesting_parent_ids":["GO:0006457","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein refolding","synonyms":[{"name":"activation of heat shock protein activity","type":"related"},{"name":"activation of protein refolding","type":"narrow"},{"name":"positive regulation of heat shock protein activity","type":"related"},{"name":"up regulation of heat shock protein activity","type":"related"},{"name":"up regulation of protein refolding","type":"exact"},{"name":"up-regulation of heat shock protein activity","type":"related"},{"name":"up-regulation of protein refolding","type":"exact"},{"name":"upregulation of heat shock protein activity","type":"related"},{"name":"upregulation of protein refolding","type":"exact"}],"termid":"GO:1904592"}


id: PBO:0059435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A5","termid":"PBO:0059435"}


id: PBO:0111297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase chadoprop types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biogrid_version","termid":"PBO:0111297"}


id: GO:0060690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquire specialized structural and/or functional features of an epithelial cell of the salivary gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"is_a","term_name":"cell differentiation involved in salivary gland development","termid":"GO:0060689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell differentiation involved in salivary gland development","termid":"GO:0060690"}


id: MONDO:0036976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm arising from the epithelial cells. It is characterized by the absence of morphologic features associated with malignancy (severe cytologic atypia, tumor cell necrosis, and high mitotic rate). Benign epithelial neoplasms remain confined to the original site of growth and only rarely metastasize to other anatomic sites.","definition_xrefs":["NCIT:C4092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"},{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign epithelial neoplasm","secondary_identifiers":["ICDO:8010/0","MEDGEN:90747","ICDO:8011/0","UMLS:C0334232"],"synonyms":[{"name":"benign epithelial neoplasm","type":"exact"},{"name":"benign epithelial tumor","type":"exact"},{"name":"benign epithelial tumour","type":"exact"},{"name":"benign epithelioma","type":"exact"},{"name":"benign neoplasm of epithelium","type":"exact"},{"name":"benign neoplasm of the epithelium","type":"exact"},{"name":"benign tumor of epithelium","type":"exact"},{"name":"benign tumor of the epithelium","type":"exact"},{"name":"benign tumour of epithelium","type":"exact"},{"name":"benign tumour of the epithelium","type":"exact"},{"name":"epithelial neoplasm, benign","type":"exact"},{"name":"epithelioma, benign","type":"exact"}],"termid":"MONDO:0036976","xrefs":{"Monarch":{"xref_id":"0036976"}}}


id: PBO:0052062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine acetyltransferase 2B","termid":"PBO:0052062"}


id: MONDO:0014108
data:
  {"annotated_genes":["SJAG_02556"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84511],"is_not":false,"summary":null,"term":"MONDO:0014108"}]},"cv_name":"mondo","definition":"Any Fanconi anemia in which the cause of the disease is a mutation in the ERCC4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi anemia","termid":"MONDO:0019391"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02556":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0021190"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0002280","MONDO:0005066","MONDO:0021190","MONDO:0005570"],"is_obsolete":false,"name":"Fanconi anemia complementation group Q","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111093","MEDGEN:815318","GARD:15934","OMIM:615272","UMLS:C3808988"],"synonyms":[{"name":"ERCC4 Fanconi anaemia","type":"exact"},{"name":"ERCC4 Fanconi anemia","type":"exact"},{"name":"FANCQ","type":"exact"},{"name":"Fanconi Anemia, complementation group type Q","type":"exact"},{"name":"Fanconi anaemia caused by mutation in ERCC4","type":"exact"},{"name":"Fanconi anaemia complementation group type Q","type":"exact"},{"name":"Fanconi anemia caused by mutation in ERCC4","type":"exact"},{"name":"Fanconi anemia complementation group type Q","type":"exact"},{"name":"Fanconi anemia, complementation group Q","type":"related"}],"termid":"MONDO:0014108","terms_by_termid":{"MONDO:0014108":null},"xrefs":{"Monarch":{"xref_id":"0014108"}}}


id: FYPO:0000283
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A chromosome segregation phenotype in which chromosomes are broken during mitotic chromosome segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"},{"relation_name":"is_a","term_name":"abnormal chromosome morphology during vegetative growth","termid":"FYPO:0000848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0001985","FYPO:0005447","FYPO:0000661","FYPO:0000002","FYPO:0000654","FYPO:0001320","FYPO:0000652","FYPO:0000707","FYPO:0000641","FYPO:0000631"],"is_obsolete":false,"name":"mitotic chromosome fragmentation upon segregation","synonyms":[{"name":"chromosome fragmentation upon mitotic chromosome segregation","type":"exact"},{"name":"chromosome fragmentation upon segregation during mitosis","type":"exact"},{"name":"chromosome fragmentation upon segregation during mitotic cell cycle","type":"exact"},{"name":"chromosome fragmentation upon segregation during vegetative growth","type":"exact"},{"name":"chromosome segregation defects, chromosome fragmentation","type":"exact"},{"name":"fragmented mitotic chromosomes upon segregation","type":"exact"}],"termid":"FYPO:0000283"}


id: MONDO:0013464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Episodic ataxia type 5 (EA5) is an extremely rare form of Hereditary episodic ataxia characterized by recurrent episodes of vertigo and ataxia lasting several hours.","definition_xrefs":["Orphanet:211067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary episodic ataxia","termid":"MONDO:0016227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"episodic ataxia type 5","secondary_identifiers":["MESH:C566601","DOID:0050993","OMIM:613855","SCTID:718756005","MEDGEN:356142","GARD:17113","UMLS:C1866039"],"synonyms":[{"name":"CACNB4 hereditary episodic ataxia","type":"exact"},{"name":"EA5","type":"related"},{"name":"episodic ataxia, type 5","type":"related"},{"name":"hereditary episodic ataxia caused by mutation in CACNB4","type":"exact"}],"termid":"MONDO:0013464","xrefs":{"Monarch":{"xref_id":"0013464"}}}


id: PBO:0055016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2431","termid":"PBO:0055016"}


id: GO:0018255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of S-(peptidyl-glycyl)-peptidyl-cysteine cross-links by the formation of a thiolester between cysteine and the carboxy-terminal glycine of ubiquitin and other proteins.","definition_xrefs":["RESID:AA0206","GOC:jh2"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via S-glycyl-L-cysteine (obsolete GO:0018255)","termid":"GO:0018255"}


id: FYPO:0001358
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01205:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01205","name":"crb2delta","uniquename":"SJAG_01205:allele-1"},"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01410:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01410","name":"rad51delta","uniquename":"SJAG_01410:allele-1"},"SJAG_01605:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01605","name":"rad9delta","uniquename":"SJAG_01605:allele-1"},"SJAG_01680:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01680","name":"chk1delta","uniquename":"SJAG_01680:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"},"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_03198:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03198","name":"oar2delta","uniquename":"SJAG_03198:allele-1"},"SJAG_03198:allele-2":{"allele_type":"amino_acid_mutation","description":"Y189D cold 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id: PBO:0085444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Porphobilinogen deaminase; catalyzes the conversion of 4-porphobilinogen to hydroxymethylbilane, the third step in heme biosynthesis; localizes to the cytoplasm and nucleus; expression is regulated by Hap2p-Hap3p, but not by levels of heme; human homolog HMBS can complement yeast mutant and allow growth of haploid null after sporulation of a heterozygous diploid","termid":"PBO:0085444"}


id: GO:0043253
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribosome contained within a chloroplast.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid ribosome","termid":"GO:0009547"},{"relation_name":"part_of","term_name":"chloroplast stroma","termid":"GO:0009570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chloroplast ribosome","termid":"GO:0043253"}


id: GO:0070516
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed by the association of the cyclin-dependent protein kinase activating kinase (CAK) holoenzyme complex with ERCC2.","definition_xrefs":["PMID:8692842","PMID:8692841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"CAK-ERCC2 complex","synonyms":[{"name":"cyclin-dependent protein kinase activating kinase holoenzyme-ERCC2 complex","type":"exact"}],"termid":"GO:0070516"}


id: PBO:0028743
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0028743"}


id: PBO:0060723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A10","termid":"PBO:0060723"}


id: PBO:0046167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E74 like ETS transcription factor 4","termid":"PBO:0046167"}


id: PBO:0007182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate phosphatase","termid":"PBO:0007182"}


id: PBO:0047867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(2)(q31)","termid":"PBO:0047867"}


id: GO:0150103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A neuroinflammatory response, occurring over several days, during which glial cells undergo nonspecific reactive changes in response to damage to the central nervous system (CNS); typically involves the proliferation or hypertrophy of different types of glial cells.","definition_xrefs":["GOC:bc","GOC:aruk","PMID:24462092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroinflammatory response","termid":"GO:0150076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reactive gliosis","synonyms":[{"name":"gliosis","type":"broad"}],"termid":"GO:0150103"}


id: GO:0090714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response mediated by the innate immune system and directed against a previously encountered immunologic stimulus, being quicker and quantitatively better compared with the initial response to that stimulus.","definition_xrefs":["PMID:26086132","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"},{"relation_name":"is_a","term_name":"immunological memory process","termid":"GO:0090713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"innate immunity memory response","termid":"GO:0090714"}


id: PBO:0064635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosyl pyrophosphate amidotransferase pseudogene 1","termid":"PBO:0064635"}


id: GO:0046941
data:
  {"annotated_genes":["SJAG_02309"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92242],"is_not":false,"summary":null,"term":"GO:0046941"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-azetidine-2-carboxylic acid + acetyl-CoA = CoA-SH + N-acetyl azetidine-2-carboxylic acid.","definition_xrefs":["PMID:12761200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"azetidine-2-carboxylic acid acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0046941","terms_by_termid":{"GO:0046941":null}}


id: PBO:0027722
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_deacetylation","termid":"PBO:0027722"}


id: PBO:0079398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUBB4B pseudogene 5","termid":"PBO:0079398"}


id: GO:0019038
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The name given to a viral genome after it has been integrated into the host genome; particularly applies to retroviruses and is a required part of the retroviral replication cycle.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete provirus (obsolete GO:0019038)","secondary_identifiers":["Wikipedia:Provirus"],"termid":"GO:0019038"}


id: PBO:0078760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase subunit 11-2 pseudogene 3","termid":"PBO:0078760"}


id: PBO:0088782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoacetylglucosamine mutase","termid":"PBO:0088782"}


id: PBO:0036242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAN complex (poly(A)-specific ribonuclease) ubiquitin C-terminal hydrolase subunit Pan2 (predicted)","termid":"PBO:0036242"}


id: PBO:0064168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group IVE","termid":"PBO:0064168"}


id: GO:1904907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maintenance of mitotic sister chromatid cohesion, telomeric.","definition_xrefs":["GO_REF:0000058","GOC:BHF_telomere","GOC:TermGenie","PMID:26373281","GOC:rph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of maintenance of mitotic sister chromatid cohesion","termid":"GO:0034182"},{"relation_name":"regulates","term_name":"maintenance of mitotic sister chromatid cohesion, telomeric","termid":"GO:0099403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of maintenance of mitotic sister chromatid cohesion, telomeric","synonyms":[{"name":"regulation of maintenance of mitotic sister chromatin cohesion at telomere","type":"exact"},{"name":"regulation of maintenance of sister chromatin cohesion at telomere at mitosis","type":"exact"},{"name":"regulation of maintenance of telomeric mitotic sister chromatin cohesion","type":"exact"}],"termid":"GO:1904907"}


id: GO:0060289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a compartment boundary. A compartment boundary is a lineage restriction boundary within a developing tissue which does not correspond to some morphological barrier.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue homeostasis","termid":"GO:0001894"},{"relation_name":"part_of","term_name":"compartment pattern specification","termid":"GO:0007386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compartment boundary maintenance","termid":"GO:0060289"}


id: PBO:0074736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 94","termid":"PBO:0074736"}


id: MONDO:0014704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skeletal overgrowth-craniofacial dysmorphism-hyperelastic skin-white matter lesions syndrome","secondary_identifiers":["MEDGEN:896409","OMIM:616592","GARD:17860","UMLS:C4225270","Orphanet:477831"],"synonyms":[{"name":"KOGS","type":"related"},{"name":"Kosaki overgrowth syndrome","type":"exact"},{"name":"skeletal overgrowth with Facial Dysmorphism, hyperelastic skin, White matter lesions, and neurologic deterioration","type":"related"}],"termid":"MONDO:0014704","xrefs":{"Monarch":{"xref_id":"0014704"}}}


id: MONDO:0000762
data:
  {"annotated_genes":["SJAG_01286","SJAG_02231"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011402"},{"annotations":[85042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012574"}]},"cv_name":"mondo","definition":"A chromosomal disorder consisting of the presence of a part of a chromosome in more copies than in a regular genome.","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal disorder","termid":"MONDO:0019040"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01286":null,"SJAG_02231":null},"genotype_count":0,"is_obsolete":false,"name":"syndrome caused by partial chromosomal duplication","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060429"],"synonyms":[{"name":"chromosomal duplication syndrome","type":"related"},{"name":"microduplication sydrome","type":"exact"}],"termid":"MONDO:0000762","terms_by_termid":{"MONDO:0011402":null,"MONDO:0012574":null},"xrefs":{"Monarch":{"xref_id":"0000762"}}}


id: GO:0006578
data:
  {"annotated_genes":["SJAG_03856","SJAG_00832"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111027,103126,111028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052699"},{"annotations":[103127,111029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903257"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any betaine, the N-trimethyl derivative of an amino acid.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine metabolic process","termid":"GO:0006577"},{"relation_name":"is_a","term_name":"modified amino acid biosynthetic process","termid":"GO:0042398"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00832":null,"SJAG_03856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amino-acid betaine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"betaine anabolism","type":"exact"},{"name":"betaine biosynthesis","type":"exact"},{"name":"betaine biosynthetic process","type":"exact"},{"name":"betaine formation","type":"exact"},{"name":"betaine synthesis","type":"exact"}],"termid":"GO:0006578","terms_by_termid":{"GO:0052699":null,"GO:1903257":null}}


id: PBO:0063163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired box 8","termid":"PBO:0063163"}


id: MONDO:0001672
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the bronchus","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system cancer","termid":"MONDO:0000376"},{"relation_name":"is_a","term_name":"bronchial neoplasm","termid":"MONDO:0002807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bronchus cancer","secondary_identifiers":["DOID:1325","ICD9:162.9","UMLS:C1322284","ICD9:162.8","MEDGEN:730206","SCTID:363493006"],"synonyms":[{"name":"bronchus cancer","type":"exact"},{"name":"cancer of bronchus","type":"exact"},{"name":"malignant bronchus neoplasm","type":"exact"},{"name":"malignant neoplasm of bronchus","type":"exact"},{"name":"malignant neoplasm of bronchus and lung","type":"narrow"},{"name":"malignant neoplasm of bronchus and lung, unspecified","type":"narrow"},{"name":"malignant neoplasm of bronchus or lung","type":"related"}],"termid":"MONDO:0001672","xrefs":{"Monarch":{"xref_id":"0001672"}}}


id: PR:C6Y4C4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sdh8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4C4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase assembly factor 4, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.16","synonyms":[{"name":"SDH assembly factor 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SDHAF4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sdh8","type":"exact"}],"termid":"PR:C6Y4C4"}


id: GO:0110098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium import into the mitochondrion.","definition_xrefs":["GOC:sl","PMID:24085037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium import into the mitochondrion","termid":"GO:0110097"},{"relation_name":"is_a","term_name":"positive regulation of calcium ion transmembrane transport","termid":"GO:1904427"},{"relation_name":"positively_regulates","term_name":"calcium import into the mitochondrion","termid":"GO:0036444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"positive regulation of calcium import into the mitochondrion","termid":"GO:0110098"}


id: FYPO:0003776
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of pseudohyphal growth is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal pseudohyphal growth","termid":"FYPO:0000550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased pseudohyphal growth","synonyms":[{"name":"increased filamentous growth","type":"broad"}],"termid":"FYPO:0003776"}


id: PBO:0087971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trichostatin A-insensitive homodimeric histone deacetylase (HDAC); specificity in vitro for histones H3, H4, H2A, and H2B; similar to Hda1p, Rpd3p, Hos1p, and Hos2p; deletion results in increased histone acetylation at rDNA repeats","termid":"PBO:0087971"}


