# terms

id: MONDO:0012954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"colorectal cancer","termid":"MONDO:0005575"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer, susceptibility to, 11","secondary_identifiers":["MEDGEN:390809","OMIM:612592","UMLS:C2675480"],"synonyms":[{"name":"CRCS11","type":"exact"},{"name":"colorectal cancer, susceptibility to, 11","type":"exact"},{"name":"colorectal cancer, susceptibility to, on chromosome 20P","type":"related"}],"termid":"MONDO:0012954","xrefs":{"Monarch":{"xref_id":"0012954"}}}


id: _global:is_kinase_activity
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_interaction_relation_helper_property","termid":"_global:molecular_interaction_relation_helper_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_kinase_activity","secondary_identifiers":["RO:0002481"],"termid":"_global:is_kinase_activity"}


id: PBO:0069741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1022, pseudogene","termid":"PBO:0069741"}


id: MONDO:0600010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Moderate hypophosphatasia is a rare, moderate form of hypophosphatasia characterized by defective mineralization of bone and/or teeth, premature loss of teeth with intact roots, and reduced serum alkaline phosphatase (ALP) activity. Individuals can present with this form of hypophosphatasia in infancy, childhood, or adulthood.","definition_xrefs":["PMID:32973344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypophosphatasia","termid":"MONDO:0018570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005066"],"is_obsolete":false,"name":"moderate hypophosphatasia","termid":"MONDO:0600010","xrefs":{"Monarch":{"xref_id":"0600010"}}}


id: GO:2001174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H2B conserved C-terminal lysine ubiquitination.","definition_xrefs":["PMID:17576814"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H2B conserved C-terminal lysine ubiquitination (obsolete GO:2001174)","synonyms":[{"name":"negative regulation of budding yeast H2B K123 ubiquitination","type":"related"},{"name":"negative regulation of fission yeast H2B K119 ubiquitination","type":"related"},{"name":"negative regulation of mammalian H2B K120 ubiquitination","type":"related"}],"termid":"GO:2001174"}


id: GO:0072332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway is induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, and ends when the execution phase of apoptosis is triggered.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction by p53 class mediator","termid":"GO:0072331"},{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway","termid":"GO:0097193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"intrinsic apoptotic signaling pathway by p53 class mediator","synonyms":[{"name":"intrinsic apoptotic signaling pathway by signal transduction by p53 class mediator","type":"exact"},{"name":"signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"}],"termid":"GO:0072332"}


id: GO:1901194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of formation of translation preinitiation complex.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of formation of translation preinitiation complex","termid":"GO:1901193"},{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic translational initiation","termid":"GO:1904689"},{"relation_name":"negatively_regulates","term_name":"formation of translation preinitiation complex","termid":"GO:0001731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0010467","GO:0002181","GO:0044085"],"is_obsolete":false,"name":"negative regulation of formation of translation preinitiation complex","synonyms":[{"name":"down regulation of formation of translation pre-initiation complex","type":"exact"},{"name":"down regulation of formation of translation preinitiation complex","type":"exact"},{"name":"down regulation of translation preinitiation complex assembly","type":"exact"},{"name":"down-regulation of formation of translation pre-initiation complex","type":"exact"},{"name":"down-regulation of formation of translation preinitiation complex","type":"exact"},{"name":"down-regulation of translation preinitiation complex assembly","type":"exact"},{"name":"downregulation of formation of translation pre-initiation complex","type":"exact"},{"name":"downregulation of formation of translation preinitiation complex","type":"exact"},{"name":"downregulation of translation preinitiation complex assembly","type":"exact"},{"name":"inhibition of formation of translation pre-initiation complex","type":"exact"},{"name":"inhibition of formation of translation preinitiation complex","type":"narrow"},{"name":"inhibition of translation preinitiation complex assembly","type":"exact"},{"name":"negative regulation of formation of translation pre-initiation complex","type":"exact"},{"name":"negative regulation of translation preinitiation complex assembly","type":"exact"}],"termid":"GO:1901194"}


id: GO:0106371
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + primary fluorescent chlorophyll catabolite + reduced [NADPH--hemoprotein reductase] = formate + 2 H+ + oxidized [NADPH--hemoprotein reductase] + primary fluorescent dioxobilin-type chlorophyll catabolite.","definition_xrefs":["RHEA:67172","PMID:23723324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"fluorescent chlorophyll catabolite monooxygenase (deformylase) activity","termid":"GO:0106371"}


id: GO:0008700
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxy-2-oxoglutarate = pyruvate + glyoxylate. Can act on both the (4R) and the (4S) enantiomers of 4-hydroxy-2-oxoglutarate.","definition_xrefs":["EC:4.1.3.16","RHEA:18169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(R,S)-4-hydroxy-2-oxoglutarate aldolase activity","secondary_identifiers":["Reactome:R-HSA-6784423"],"synonyms":[{"name":"2-keto-4-hydroxybutyrate aldolase activity","type":"related"},{"name":"2-keto-4-hydroxyglutarate aldolase activity","type":"exact"},{"name":"2-keto-4-hydroxyglutaric aldolase activity","type":"related"},{"name":"2-oxo-4-hydroxyglutarate aldolase activity","type":"related"},{"name":"2-oxo-4-hydroxyglutaric aldolase activity","type":"related"},{"name":"4-hydroxy-2-ketoglutarate aldolase activity","type":"related"},{"name":"4-hydroxy-2-ketoglutaric aldolase activity","type":"related"},{"name":"4-hydroxy-2-oxoglutarate glyoxylate-lyase (pyruvate-forming)","type":"related"},{"name":"4-hydroxy-2-oxoglutarate glyoxylate-lyase activity","type":"related"},{"name":"DL-4-hydroxy-2-ketoglutarate aldolase activity","type":"related"},{"name":"KHG-aldolase activity","type":"related"},{"name":"hydroxyketoglutarate aldolase activity","type":"related"},{"name":"hydroxyketoglutaric aldolase activity","type":"related"}],"termid":"GO:0008700"}


id: PBO:0018140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain protein, involved in cytoplasmic translation Gir2","termid":"PBO:0018140"}


id: PBO:0002889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-aminobutyrate aminotransferase (GABA transaminase)","termid":"PBO:0002889"}


id: PBO:0018189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS complex subunit Mic26 (predicted)","termid":"PBO:0018189"}


id: MONDO:0008918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Carnitine-acylcarnitine translocase (CACT) deficiency is a life-threatening, inherited disorder of fatty acid oxidation which usually presents in the neonatal period with severe hypoketotic hypoglycemia, hyperammonemia, cardiomyopathy and/or arrhythmia, hepatic dysfunction, skeletal muscle weakness, and encephalopathy.","definition_xrefs":["Orphanet:159"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hypertrophic cardiomyopathy","termid":"MONDO:0005045"},{"relation_name":"excluded_subClassOf","term_name":"heart disorder","termid":"MONDO:0005267"},{"relation_name":"is_a","term_name":"disorder of fatty acid oxidation and ketogenesis","termid":"MONDO:0017713"},{"relation_name":"is_a","term_name":"disorder of carnitine cycle and carnitine transport","termid":"MONDO:0017716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"carnitine-acylcarnitine translocase deficiency","secondary_identifiers":["SCTID:238003000","GARD:1123","UMLS:C0342791","OMIM:212138","icd11.foundation:677949122","MEDGEN:91000","MESH:C562812","NANDO:1200972","NANDO:2200511","NCIT:C133086","DOID:0111585"],"synonyms":[{"name":"CACT deficiency","type":"exact"},{"name":"CACTD","type":"related"},{"name":"CARNITINE-acylcarnitine translocase deficiency","type":"related"},{"name":"Cact deficiency","type":"related"},{"name":"carnitine-acylcarnitine translocase deficiency","type":"exact"}],"termid":"MONDO:0008918","xrefs":{"Monarch":{"xref_id":"0008918"}}}


id: PBO:0068766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 3, pseudogene","termid":"PBO:0068766"}


id: PBO:0084113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Helicase encoded by the Y' element of subtelomeric regions; highly expressed in the mutants lacking the telomerase component TLC1; potentially phosphorylated by Cdc28p","termid":"PBO:0084113"}


id: GO:0043582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the sporangium over time, from its formation to the mature structure. A sporangium is a structure producing and containing spores.","definition_xrefs":["GOC:jl","Wikipedia:Sporagium"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sporangium development","synonyms":[{"name":"sporangia development","type":"exact"}],"termid":"GO:0043582"}


id: MONDO:0035267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare congenital aortic malformation characterized by an aortic valve with four cusps instead of the usual three. The cusps can be equal-sized or vary in size. The malformation is an isolated finding in the majority of cases but may also be associated with other cardiac anomalies. The most common complication is aortic regurgitation. Aortic stenosis is infrequently observed. Patients usually become symptomatic in the fifth to sixth decade of life and may present with palpitations, chest pain, dyspnea, fatigue, pedal edema, and syncope. In severe cases, congestive heart failure can be the presenting symptom. [Orphanet:542568]","definition_xrefs":["Orphanet:542568"],"gene_count":0,"genotype_count":0,"name":"obsolete quadricuspid aortic valve (obsolete MONDO:0035267)","termid":"MONDO:0035267","xrefs":{"Monarch":{"xref_id":"0035267"}}}


id: GO:0042596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The response of an organism to a perceived external threat.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal response to stress","termid":"GO:0033555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fear response","secondary_identifiers":["GO:0001663"],"synonyms":[{"name":"physiological fear response","type":"exact"}],"termid":"GO:0042596"}


id: PBO:0064840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 12B","termid":"PBO:0064840"}


id: PBO:0050884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indoleamine 2,3-dioxygenase 1","termid":"PBO:0050884"}


id: GO:0046163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of heme C, a derivative of heme found in cytochromes c, b4, and f.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme catabolic process","termid":"GO:0042167"},{"relation_name":"is_a","term_name":"heme C metabolic process","termid":"GO:0046162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"heme C catabolic process","synonyms":[{"name":"haem C catabolic process","type":"exact"},{"name":"haem C catabolism","type":"exact"},{"name":"heme C breakdown","type":"exact"},{"name":"heme C catabolism","type":"exact"},{"name":"heme C degradation","type":"exact"}],"termid":"GO:0046163"}


id: PBO:0070653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 24","termid":"PBO:0070653"}


id: FYPO:0002766
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of clotrimazole than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0002682","FYPO:0000003"],"is_obsolete":false,"name":"resistance to clotrimazole","synonyms":[{"name":"resistance to clotrimazole during mitotic cell cycle","type":"related"},{"name":"resistance to clotrimazole during vegetative growth","type":"exact"},{"name":"resistant to clotrimazole","type":"exact"}],"termid":"FYPO:0002766"}


id: FYPO:0004856
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glucan endo-1,6-beta-glucosidase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"abnormal endo-1,6-beta-glucosidase activity","synonyms":[{"name":"abnormal glucan endo-1,6-beta-glucosidase activity","type":"exact"}],"termid":"FYPO:0004856"}


id: PBO:0044862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in esophageal cancer 1","termid":"PBO:0044862"}


id: GO:0080052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a histidine stimulus.","definition_xrefs":["PMID:15889294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to histidine","termid":"GO:0080052"}


id: PBO:0077910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 1","termid":"PBO:0077910"}


id: PBO:0034325
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-starts_before","termid":"PBO:0034325"}


id: PBO:0074376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG1 pseudogene 2","termid":"PBO:0074376"}


id: FYPO:0007525
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of ribosome binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:19625445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"decreased ribosome binding","synonyms":[{"name":"reduced ribosome binding","type":"exact"}],"termid":"FYPO:0007525"}


id: PBO:0049659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 13","termid":"PBO:0049659"}


id: MONDO:0006872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Allergic reaction to tree nuts that is triggered by the immune system.","definition_xrefs":["MESH:D021184"],"gene_count":0,"genotype_count":0,"name":"obsolete nut allergic reaction (obsolete MONDO:0006872)","secondary_identifiers":["DOID:4379","SCTID:91934008"],"synonyms":[{"name":"022 tree nuts (tn) (ccpr) allergic disease","type":"exact"},{"name":"allergy of 022 tree nuts (tn) (ccpr)","type":"exact"},{"name":"allergy to nuts","type":"exact"},{"name":"nut allergic reaction","type":"exact"},{"name":"nut allergy","type":"related"}],"termid":"MONDO:0006872","xrefs":{"Monarch":{"xref_id":"0006872"}}}


id: PBO:0081699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 621","termid":"PBO:0081699"}


id: GO:0070493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by thrombin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:mah","PMID:1672265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"thrombin-activated receptor signaling pathway","synonyms":[{"name":"thrombin receptor signaling pathway","type":"exact"},{"name":"thrombin receptor signalling pathway","type":"exact"}],"termid":"GO:0070493"}


id: GO:0141215
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyltaurine + H2O = acetate + taurine.","definition_xrefs":["PMID:39112712","RHEA:81107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on ester bonds","termid":"GO:0016788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"N-acetyltaurine hydrolase activity","termid":"GO:0141215"}


id: GO:0048288
data:
  {"annotated_genes":["SJAG_00810"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88002],"is_not":false,"summary":null,"term":"GO:0048288"}]},"cv_name":"biological_process","definition":"The joining of 2 or more lipid bilayer membranes that surround the nucleus during the creation of a single nucleus from multiple nuclei.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane fusion","termid":"GO:0000740"},{"relation_name":"part_of","term_name":"karyogamy","termid":"GO:0000741"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00810":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"nuclear membrane fusion involved in karyogamy","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear membrane fusion during karyogamy","type":"related"}],"termid":"GO:0048288","terms_by_termid":{"GO:0048288":null}}


id: PBO:0059952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 38","termid":"PBO:0059952"}


id: MONDO:0019577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated congenital anonychia","termid":"MONDO:0019211"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anonychia-onychodystrophy syndrome","secondary_identifiers":["MESH:C536378","GARD:710","Orphanet:90390","MEDGEN:350767","UMLS:C1862840"],"termid":"MONDO:0019577","xrefs":{"Monarch":{"xref_id":"0019577"}}}


id: GO:0061088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency, or extent of sequestering of zinc ion. Sequestering of zinc ion is the process of binding or confining zinc ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of sequestering of zinc ion (obsolete GO:0061088)","termid":"GO:0061088"}


id: MOD:01983
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N,N-dimethyllglycine.","definition_xrefs":["PubMed:23978223","ChEBI:17724","PubMed:23818633","RESID:AA0620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated glycine","termid":"MOD:00714"},{"relation_name":"is_a","term_name":"alpha-amino dimethylated residue","termid":"MOD:01686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N-dimethylglycine","synonyms":[{"name":"(dimethylamino)ethanoic acid","type":"exact"},{"name":"1-carboxy-N,N-dimethylaminomethane","type":"exact"},{"name":"2-(dimethylamino)acetic acid","type":"exact"},{"name":"MOD_RES N,N-dimethylglycine","type":"exact"},{"name":"vitamin B16","type":"exact"}],"termid":"MOD:01983"}


id: MONDO:0008953
data:
  {"annotated_genes":["SJAG_02619"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86330],"is_not":false,"summary":null,"term":"MONDO:0008953"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"peroxisome biogenesis disorder","termid":"MONDO:0019234"},{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX1 defect","termid":"MONDO:0100259"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02619":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005066","MONDO:0019053","MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"peroxisome biogenesis disorder 1A (Zellweger)","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:214100","DOID:0080476","UMLS:C4721541","MEDGEN:1648474"],"synonyms":[{"name":"Cerebrohepatorenal syndrome","type":"related"},{"name":"PBD1A","type":"related"},{"name":"Zs","type":"related"},{"name":"peroxisome biogenesis disorder 1A (Zellweger)","type":"exact"},{"name":"peroxisome biogenesis disorder, complementation group 1","type":"related"},{"name":"peroxisome biogenesis disorder, complementation group E","type":"related"}],"termid":"MONDO:0008953","terms_by_termid":{"MONDO:0008953":null},"xrefs":{"Monarch":{"xref_id":"0008953"}}}


id: PBO:0005631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin/metalloprotease fusion protein (predicted)","termid":"PBO:0005631"}


id: MONDO:0004499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lung carcinoma arising from the hilum of the lung.","definition_xrefs":["NCIT:C7454"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung hilum cancer","termid":"MONDO:0004332"},{"relation_name":"is_a","term_name":"lung carcinoma","termid":"MONDO:0005138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung hilum carcinoma","secondary_identifiers":["MEDGEN:235266","DOID:8207","UMLS:C1334445"],"synonyms":[{"name":"carcinoma of lung hilus","type":"exact"},{"name":"hilar lung carcinoma","type":"exact"},{"name":"lung hilum cancer","type":"broad"},{"name":"lung hilum carcinoma","type":"exact"},{"name":"lung hilus carcinoma","type":"exact"}],"termid":"MONDO:0004499","xrefs":{"Monarch":{"xref_id":"0004499"}}}


id: GO:0031653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any homeostatic process in which an organism releases excess heat to the environment, thereby lowering its internal temperature.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temperature homeostasis","termid":"GO:0001659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heat dissipation","termid":"GO:0031653"}


id: PBO:0074775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3H","termid":"PBO:0074775"}


id: FYECO:0000402
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which xylose was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xylose added","termid":"FYECO:0000402"}


id: FYPO:0006372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosomes or sister chromatids do not separate completely during meiosis I or meiosis II, and partially separated DNA masses are connected by one or more bridges formed of chromatin.","definition_xrefs":["PomBase:mah","PMID:29123917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"incomplete meiotic chromosome segregation, with chromosomal bridge","synonyms":[{"name":"abnormal meiotic chromosome segregation, with chromosomal bridge","type":"exact"},{"name":"incomplete chromosome segregation, with chromosomal bridge, during meiosis","type":"exact"},{"name":"incomplete meiotic chromosome segregation, with chromatin bridge","type":"exact"}],"termid":"FYPO:0006372"}


id: MONDO:0018521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that involves the pancreas.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"exocrine pancreatic carcinoma","termid":"MONDO:0005192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"squamous cell carcinoma of pancreas","secondary_identifiers":["GARD:21776","DOID:0080323","Orphanet:424039","MEDGEN:393937","NCIT:C173813","UMLS:C2675993"],"synonyms":[{"name":"pancreas squamous cell carcinoma","type":"exact"},{"name":"pancreatic squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of the pancreas","type":"related"}],"termid":"MONDO:0018521","xrefs":{"Monarch":{"xref_id":"0018521"}}}


id: PBO:0076930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor binding to IGHM enhancer 3","termid":"PBO:0076930"}


id: GO:0050145
data:
  {"annotated_genes":["SJAG_03798","SJAG_00779","SJAG_02038","SJAG_04657","SJAG_04849"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004127"},{"annotations":[118107,97624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004017"},{"annotations":[101742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004385"},{"annotations":[117528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004798"},{"annotations":[115078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033862"},{"annotations":[117529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009041"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + nucleoside monophosphate = ADP + nucleoside diphosphate.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"},{"relation_name":"is_a","term_name":"nucleobase-containing compound kinase activity","termid":"GO:0019205"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00779":null,"SJAG_02038":null,"SJAG_03798":null,"SJAG_04657":null,"SJAG_04849":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"nucleoside monophosphate kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:NUCLEOSIDE-PHOSPHATE-KINASE-RXN","Reactome:R-HSA-75126","Reactome:R-HSA-9754978","Reactome:R-HSA-2162092","EC:2.7.4.4","Reactome:R-HSA-6788810","Reactome:R-HSA-73635","Reactome:R-HSA-75125","Reactome:R-HSA-73548","Reactome:R-HSA-6788798","RHEA:24036","GO:0019201"],"synonyms":[{"name":"ATP:nucleoside-phosphate phosphotransferase activity","type":"related"},{"name":"NMP-kinase activity","type":"related"},{"name":"nucleoside-phosphate kinase activity","type":"exact"},{"name":"nucleotide kinase activity","type":"related"}],"termid":"GO:0050145","terms_by_termid":{"GO:0004017":null,"GO:0004127":null,"GO:0004385":null,"GO:0004798":null,"GO:0009041":null,"GO:0033862":null}}


id: PBO:0000534
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex binds MCB 5'-ACGCGT-3'","termid":"PBO:0000534"}


id: FYPO:0002526
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to latrunculin B. Cells stop growing (and may die) at a concentration of latrunculin B that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to latrunculin B","synonyms":[{"name":"hypersensitive to latrunculin B","type":"exact"},{"name":"sensitive to LatB","type":"exact"},{"name":"sensitive to latrunculin B during mitotic cell cycle","type":"related"},{"name":"sensitive to latrunculin B during vegetative growth","type":"exact"}],"termid":"FYPO:0002526"}


id: PR:O42858
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A retinoblastoma-binding protein 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"set1 complex component swd1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.05c","secondary_identifiers":["UniProtKB:O42858"],"synonyms":[{"name":"COMPASS component swd1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Set1C component swd1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RBBP5","type":"exact"},{"name":"complex proteins associated with set1 protein swd1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42858"}


id: PBO:0091533
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binding affinity for ATP-bound F-actin Kd 35 nM","termid":"PBO:0091533"}


id: GO:0051194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving a cofactor.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cofactor metabolic process (obsolete GO:0051194)","synonyms":[{"name":"activation of cofactor metabolic process","type":"narrow"},{"name":"positive regulation of cofactor metabolism","type":"exact"},{"name":"stimulation of cofactor metabolic process","type":"narrow"},{"name":"up regulation of cofactor metabolic process","type":"exact"},{"name":"up-regulation of cofactor metabolic process","type":"exact"},{"name":"upregulation of cofactor metabolic process","type":"exact"}],"termid":"GO:0051194"}


id: GO:0045819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of glycogen.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycogen catabolic process","termid":"GO:0005981"},{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of glycogen metabolic process","termid":"GO:0070875"},{"relation_name":"positively_regulates","term_name":"glycogen catabolic process","termid":"GO:0005980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"positive regulation of glycogen catabolic process","synonyms":[{"name":"activation of glycogen catabolic process","type":"narrow"},{"name":"positive regulation of glycogen breakdown","type":"exact"},{"name":"positive regulation of glycogen catabolism","type":"exact"},{"name":"positive regulation of glycogen degradation","type":"exact"},{"name":"positive regulation of glycogenolysis","type":"exact"},{"name":"stimulation of glycogen catabolic process","type":"narrow"},{"name":"up regulation of glycogen catabolic process","type":"exact"},{"name":"up-regulation of glycogen catabolic process","type":"exact"},{"name":"upregulation of glycogen catabolic process","type":"exact"}],"termid":"GO:0045819"}


id: GO:0051504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A branched pathway that produces the precursors to four structurally distinct types of polycyclic diterpenes. The pathway starts with the cyclization of geranylgeranyl diphosphate into ent-copalyl diphosphate and syn-copalyl diphosphate. The catalytic conversion by diterpene cyclases of these two compounds produces the four diterpene hydrocarbons which are precursors to the four structurally distinct classes of diterpene phytoalexins.","definition_xrefs":["MetaCyc:PWY-2981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene biosynthetic process","termid":"GO:0046246"},{"relation_name":"part_of","term_name":"diterpene phytoalexin biosynthetic process","termid":"GO:0051502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006629"},{"rel_name":"part_of","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0019748"],"is_obsolete":false,"name":"diterpene phytoalexin precursor biosynthetic process","synonyms":[{"name":"diterpene phytoalexin precursor anabolism pathway","type":"exact"},{"name":"diterpene phytoalexin precursor formation pathway","type":"exact"},{"name":"diterpene phytoalexin precursor synthesis pathway","type":"exact"}],"termid":"GO:0051504"}


id: PBO:0061655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear FMR1 interacting protein 2","termid":"PBO:0061655"}


id: PBO:0078143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 22","termid":"PBO:0078143"}


id: MONDO:1011350
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Premature aging syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"premature aging syndrome, non-human animal","termid":"MONDO:1011350","xrefs":{"Monarch":{"xref_id":"1011350"}}}


id: PR:G2TRT6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC417.16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRT6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC417.16","synonyms":[{"name":"Spom972h-SPCC417.16","type":"exact"}],"termid":"PR:G2TRT6"}


id: MONDO:0015765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital myopathy with cores (obsolete MONDO:0015765)","secondary_identifiers":["Orphanet:172976"],"termid":"MONDO:0015765","xrefs":{"Monarch":{"xref_id":"0015765"}}}


id: GO:0002745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Antigen processing and presentation which is initiated by uptake of antigen bound to a cell surface receptor.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation initiated by receptor mediated uptake of antigen","termid":"GO:0002745"}


id: MONDO:0014540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amelogenesis imperfecta in which the cause of the disease is a mutation in the ITGB6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta type 1","termid":"MONDO:0015047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta type 1H","secondary_identifiers":["DOID:0110064","OMIM:616221","UMLS:C4015557","GARD:16071","MEDGEN:863994"],"synonyms":[{"name":"AI1H","type":"exact"},{"name":"ITGB6 amelogenesis imperfecta","type":"exact"},{"name":"amelogenesis imperfecta caused by mutation in ITGB6","type":"exact"},{"name":"amelogenesis imperfecta type IH","type":"exact"},{"name":"amelogenesis imperfecta, type 1H","type":"related"},{"name":"amelogenesis imperfecta, type IH","type":"related"}],"termid":"MONDO:0014540","xrefs":{"Monarch":{"xref_id":"0014540"}}}


id: GO:0008179
data:
  {"annotated_genes":["SJAG_01754"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69758],"is_not":false,"summary":null,"term":"GO:0008179"}]},"cv_name":"molecular_function","definition":"Binding to an adenylate cyclase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"adenylate cyclase binding","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-170672"],"synonyms":[{"name":"adenylyl cyclase binding","type":"exact"}],"termid":"GO:0008179","terms_by_termid":{"GO:0008179":null}}


id: PATO:0000216
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000216 heart rate (obsolete PATO:0000216)","termid":"PATO:0000216"}


id: GO:0050695
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoylformate = benzaldehyde + CO2.","definition_xrefs":["MetaCyc:BENZOYLFORMATE-DECARBOXYLASE-RXN","EC:4.1.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"benzoylformate decarboxylase activity","secondary_identifiers":["UM-BBD_reactionID:r1049","RHEA:23368"],"synonyms":[{"name":"benzoylformate carboxy-lyase (benzaldehyde-forming)","type":"related"},{"name":"benzoylformate carboxy-lyase activity","type":"related"},{"name":"phenylglyoxylate decarboxylase activity","type":"exact"}],"termid":"GO:0050695"}


id: MONDO:0001679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete crater-like holes of optic disk (obsolete MONDO:0001679)","secondary_identifiers":["DOID:13295","ICD9:377.22"],"synonyms":[{"name":"crater-like optic disk holes","type":"exact"}],"termid":"MONDO:0001679","xrefs":{"Monarch":{"xref_id":"0001679"}}}


id: PBO:0042527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 4","termid":"PBO:0042527"}


id: PBO:0090135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Ebp2","termid":"PBO:0090135"}


id: PBO:0069371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 631, pseudogene","termid":"PBO:0069371"}


id: PBO:0044683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage inducible transcript 4 like","termid":"PBO:0044683"}


id: PBO:0051357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2/OR2-10 (pseudogene)","termid":"PBO:0051357"}


id: PBO:0040253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 9B","termid":"PBO:0040253"}


id: GO:0018169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the posttranslational transfer of one or more glutamic acid residues to the C-terminus of ribosomal protein S6.","definition_xrefs":["GOC:mah","PMID:2570347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-glutamic acid ligase activity","termid":"GO:0070739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0140096","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ribosomal S6-glutamic acid ligase activity","termid":"GO:0018169"}


id: MONDO:0004186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare self-limiting, rapidly growing, non-encapsulated benign neoplasm that arises from the cranium. This is an osteolytic lesion. It is characterized by the presence of plump spindle-shaped fibroblasts, multinucleated osteoclast-like giant cells, chronic inflammatory infiltrate, red blood cell extravasation, and high mitotic activity.","definition_xrefs":["NCIT:C27248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nodular fasciitis","termid":"MONDO:0004187"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cranial nodular fasciitis","secondary_identifiers":["MEDGEN:272511","DOID:7326","UMLS:C1333162"],"synonyms":[{"name":"cranial nodular fasciitis","type":"exact"},{"name":"cranial pseudosarcomatous fasciitis","type":"exact"}],"termid":"MONDO:0004186","xrefs":{"Monarch":{"xref_id":"0004186"}}}


id: PBO:0074773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3F","termid":"PBO:0074773"}


id: PATO:0001844
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An acidity which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"acidity","termid":"PATO:0001842"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased acidity","synonyms":[{"name":"high acidity","type":"exact"}],"termid":"PATO:0001844"}


id: GO:0102526
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 8-desmethylnovobiocic acid = S-adenosyl-L-homocysteine + novobiocic acid + H+.","definition_xrefs":["EC:2.1.1.284","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"8-demethylnovobiocic acid C8-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-14543","RHEA:36651"],"termid":"GO:0102526"}


id: PBO:0039875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP31 antisense RNA 1","termid":"PBO:0039875"}


id: PBO:0045639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 51 (pseudogene)","termid":"PBO:0045639"}


id: PBO:0089482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin-related substrate adaptor for RhoGEF, Art1","termid":"PBO:0089482"}


id: GO:0033569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of lactoferrin from one side of a membrane to the other.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transmembrane transporter activity","termid":"GO:0008320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140318"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0140318","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"lactoferrin transmembrane transporter activity","termid":"GO:0033569"}


id: GO:0045206
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of MAPK phosphatase into, out of or within a cell, or between cells.","definition_xrefs":["GOC:ebc","ISBN:0815340729","GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK phosphatase transporter activity (obsolete GO:0045206)","synonyms":[{"name":"MAPK phosphatase transporter activity","type":"exact"},{"name":"MKP shuttle","type":"narrow"},{"name":"leptomycin B-sensitive MAPK phosphatase transporter activity","type":"narrow"},{"name":"leptomycin B-sensitive MKP shuttle","type":"narrow"}],"termid":"GO:0045206"}


id: GO:0006052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of N-acetylmannosamine, the acetylated derivative of mannosamine, 2-amino-2-deoxymannose.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylmannosamine metabolic process","termid":"GO:0006051"},{"relation_name":"is_a","term_name":"mannosamine biosynthetic process","termid":"GO:0046347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-acetylmannosamine biosynthetic process","synonyms":[{"name":"N-acetylmannosamine anabolism","type":"exact"},{"name":"N-acetylmannosamine biosynthesis","type":"exact"},{"name":"N-acetylmannosamine formation","type":"exact"},{"name":"N-acetylmannosamine synthesis","type":"exact"}],"termid":"GO:0006052"}


id: SO:0002271
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Jockey retrotransposons are LINE elements (SO:0000194) found only in arthropods. The full-length element is ~ 5 kb and contains two open reading frames (SO:0000236), ORF1 (568 aa) and ORF2 (916 aa), the second of which encodes an apurinic endonuclease (APE) and a reverse transcriptase (RT).","definition_xrefs":["PMID:31709017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LINE_element","termid":"SO:0000194"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Jockey_LINE_retrotransposon","synonyms":[{"name":"Jockey LINE retrotransposon","type":"exact"},{"name":"LINE Jockey element","type":"exact"},{"name":"RIJ retrotransposon","type":"exact"}],"termid":"SO:0002271"}


id: GO:0001863
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a collectin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["ISBN:0781735149","GOC:signaling","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin receptor activity","termid":"GO:0001847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"collectin receptor activity","termid":"GO:0001863"}


id: GO:0051253
data:
  {"annotated_genes":["SJAG_00996","SJAG_00797","SJAG_00792","SJAG_01804","SJAG_00441","SJAG_02981","SJAG_00987","SJAG_02898","SJAG_01331","SJAG_03883","SJAG_00861","SJAG_02573","SJAG_03696","SJAG_04584","SJAG_02752","SJAG_02846","SJAG_04026","SJAG_01000","SJAG_02255","SJAG_00290","SJAG_03283","SJAG_04249","SJAG_03143","SJAG_01199","SJAG_04039","SJAG_04512","SJAG_04586","SJAG_01311","SJAG_03319","SJAG_02385","SJAG_00410","SJAG_01230","SJAG_02370","SJAG_04613","SJAG_04539","SJAG_04312","SJAG_04607","SJAG_02858","SJAG_00266","SJAG_03067","SJAG_00926","SJAG_04921","SJAG_01728","SJAG_04268","SJAG_01254","SJAG_02444","SJAG_03081","SJAG_00163","SJAG_04825","SJAG_02730","SJAG_01680","SJAG_04381","SJAG_02104","SJAG_00802","SJAG_03845","SJAG_01707","SJAG_01799","SJAG_00969","SJAG_04946","SJAG_00142","SJAG_03473","SJAG_01157","SJAG_00124"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117812,78249,89670,99589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"},{"annotations":[88962,95740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048255"},{"annotations":[107459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060195"},{"annotations":[100570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045892"},{"annotations":[88963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902373"},{"annotations":[89262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120271"},{"annotations":[91153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060212"},{"annotations":[105798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902369"},{"annotations":[92777,93223,92875,106489,79925,108502,93544,104521,108061,105986,106218,107461,91645,94210,100495,110634,90667,106236,107718,112467,113757,98387,113324,115130,87069,93261,105997,115569,103056,89526,94127,102279,103458,103761,105305,93715,88318,101348,110213,111583,114075,116868,105744,91621,93365,100473,105398,95771,107946,90739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000122"},{"annotations":[95878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016480"},{"annotations":[100496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010621"},{"annotations":[117433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034244"},{"annotations":[90118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090669"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving RNA.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"},{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"},{"relation_name":"negatively_regulates","term_name":"RNA metabolic 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regulation of RNA metabolic process","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of RNA metabolic process","type":"exact"},{"name":"down-regulation of RNA metabolic process","type":"exact"},{"name":"downregulation of RNA metabolic process","type":"exact"},{"name":"inhibition of RNA metabolic process","type":"narrow"},{"name":"negative regulation of RNA metabolism","type":"exact"}],"termid":"GO:0051253","terms_by_termid":{"GO:0000122":null,"GO:0010621":null,"GO:0016480":null,"GO:0034244":null,"GO:0045892":null,"GO:0048255":null,"GO:0060195":null,"GO:0060212":null,"GO:0070935":null,"GO:0090669":null,"GO:0120271":null,"GO:1902369":null,"GO:1902373":null}}


id: PBO:0001943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD-dependent amino acid oxidase (predicted)","termid":"PBO:0001943"}


id: PBO:0036302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated WD repeat protein Atg18b","termid":"PBO:0036302"}


id: GO:0002360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a lymphoid progenitor cell becomes committed to becoming any type of T cell.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell lineage commitment","synonyms":[{"name":"T lymphocyte lineage commitment","type":"exact"},{"name":"T-cell lineage commitment","type":"exact"},{"name":"T-lymphocyte lineage commitment","type":"exact"}],"termid":"GO:0002360"}


id: GO:0045091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of single stranded viral RNA replication via double stranded DNA intermediate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral genome replication","termid":"GO:0045069"},{"relation_name":"is_a","term_name":"regulation of RNA biosynthetic process","termid":"GO:2001141"},{"relation_name":"regulates","term_name":"single stranded viral RNA replication via double stranded DNA intermediate","termid":"GO:0039692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of single stranded viral RNA replication via double stranded DNA intermediate","synonyms":[{"name":"regulation of retroviral genome replication","type":"exact"}],"termid":"GO:0045091"}


id: PBO:0078667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 3-2","termid":"PBO:0078667"}


id: MONDO:0021538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A verrucous carcinoma that involves the oral cavity.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oral cavity squamous cell carcinoma","termid":"MONDO:0004958"},{"relation_name":"is_a","term_name":"verrucous carcinoma","termid":"MONDO:0006006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"verrucous carcinoma of oral cavity","secondary_identifiers":["UMLS:C0280306","MEDGEN:124716","NCIT:C8174","SCTID:403889000"],"synonyms":[{"name":"mouth verrucous carcinoma","type":"exact"},{"name":"oral cavity verrucous cancer","type":"exact"},{"name":"oral cavity verrucous carcinoma","type":"exact"},{"name":"verrucous carcinoma of mouth","type":"exact"},{"name":"verrucous carcinoma of the mouth","type":"exact"},{"name":"verrucous carcinoma of the oral cavity","type":"exact"}],"termid":"MONDO:0021538","xrefs":{"Monarch":{"xref_id":"0021538"}}}


id: FYPO:0002010
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein encoded by genes normally induced during iron ion starvation measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"increased level of iron ion starvation-induced proteins","synonyms":[{"name":"increased level of iron ion depletion-induced proteins","type":"exact"},{"name":"increased level of iron ion deprivation-induced proteins","type":"exact"},{"name":"increased level of iron ion starvation-induced proteins during mitotic cell cycle","type":"related"},{"name":"increased level of iron ion starvation-induced proteins during vegetative growth","type":"exact"},{"name":"increased level of proteins expressed during iron ion starvation","type":"exact"},{"name":"increased level of proteins induced by iron ion starvation","type":"exact"},{"name":"increased protein level of genes (normally) induced during iron starvation","type":"exact"}],"termid":"FYPO:0002010"}


id: MONDO:0012727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kawasaki disease (KD) is a febrile, systemic, self-limiting vasculitis affecting children and characterized by inflammation in the medium sized vessels associated with coronary arterial aneurysms (CAA) that may be life threatening when untreated. KD is the most common cause of acquired heart disease in children in developed countries and is a risk factor for ischemic heart disease in adulthood.","definition_xrefs":["Orphanet:2331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphadenitis","termid":"MONDO:0002052"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"vasculitis","termid":"MONDO:0018882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"mucocutaneous lymph node syndrome","secondary_identifiers":["MedDRA:10023320","NCIT:C34825","MESH:D009080","SCTID:75053002","EFO:0004246","UMLS:C0026691","DOID:13378","OMIM:611775","MEDGEN:10118","icd11.foundation:540285662","GARD:6816","ICD9:446.1"],"synonyms":[{"name":"Kawasaki disease","type":"related"},{"name":"Kawasaki syndrome","type":"related"},{"name":"Kawasaki's disease","type":"exact"},{"name":"Kd","type":"related"},{"name":"MLNS","type":"exact"},{"name":"acute febrile MCLS","type":"exact"},{"name":"acute febrile mucocutaneous lymph node syndrome","type":"exact"},{"name":"acute febrile mucocutaneous lymph node syndrome [MCLS]","type":"exact"},{"name":"infantile polyarteritis","type":"related"},{"name":"infantile polyarteritis nodosa","type":"exact"},{"name":"mucocutaneous lymph node syndrome","type":"exact"}],"termid":"MONDO:0012727","xrefs":{"Monarch":{"xref_id":"0012727"}}}


id: PBO:0071931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 8","termid":"PBO:0071931"}


id: GO:0000774
data:
  {"annotated_genes":["SJAG_04817","SJAG_01556","SJAG_04014","SJAG_01737","SJAG_04511","SJAG_02875","SJAG_01510"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70064,87387,91821,103921,109238,109373,110347],"is_not":false,"summary":null,"term":"GO:0000774"}]},"cv_name":"molecular_function","definition":"Binds to and stimulates the hydrolysis and exchange of adenyl nucleotides by other proteins.","definition_xrefs":["GOC:kd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase regulator activity","termid":"GO:0060590"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01510":null,"SJAG_01556":null,"SJAG_01737":null,"SJAG_02875":null,"SJAG_04014":null,"SJAG_04511":null,"SJAG_04817":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0003674"],"is_obsolete":false,"name":"adenyl-nucleotide exchange factor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5252079"],"termid":"GO:0000774","terms_by_termid":{"GO:0000774":null}}


id: MONDO:0020456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pleuro-pericardial cyst is a rare, mostly congenital, pericardium anomaly characterized by the presence of, usually asymptomatic, cysts which are typically located in the right costophrenic angle and are usually incidentally diagnosed. On occasion, it manifests with chest pain, dyspnea, tachycardia, persistent cough or cardiac arrhythmias. The condition is usually benign, but rare complications, such as cardiac tamponade, cardiogenic shock, mitral valve prolapse, hoarseness atrial fibrillation, right ventricular outflow, tract obstruction, spontaneous internal hemorrhage, pulmonary stenosis and sudden death, may occur.","definition_xrefs":["Orphanet:99131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pericardium anomaly","termid":"MONDO:0017300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleuro-pericardial cyst","secondary_identifiers":["MEDGEN:576787","UMLS:C0345141","GARD:19668"],"termid":"MONDO:0020456","xrefs":{"Monarch":{"xref_id":"0020456"}}}


id: PBO:0028165
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-exon_skipping","termid":"PBO:0028165"}


id: FYPO:0000159
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromosome condensation is abnormal. Chromosome condensation is the progressive compaction of dispersed interphase chromatin into threadlike chromosomes prior to mitotic or meiotic nuclear division.","definition_xrefs":["PomBase:mah","GO:0030261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome segregation","termid":"FYPO:0000029"},{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"abnormal chromosome condensation","secondary_identifiers":["FYPO:0000028"],"synonyms":[{"name":"chromosome condensation defects","type":"exact"}],"termid":"FYPO:0000159"}


id: GO:0140671
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chromatin remodeling complex that regulates transcription via acetylation primarily of nucleosomal histones H3 and H2B. In budding yeast shares the histone acetylation (HAT) module of ADA2-GCN5-NGG1-SGF29 with the related SAGA complex.","definition_xrefs":["PMID:21734642","GOC:bhm","PMID:28966424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SAGA-type complex","termid":"GO:0070461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"ADA complex","synonyms":[{"name":"ADA HAT complex","type":"exact"},{"name":"ADA histone acetyltransferase complex","type":"exact"},{"name":"Ada2/Gcn5/Ada3 transcription activator complex","type":"related"},{"name":"scADA","type":"narrow"}],"termid":"GO:0140671"}


id: GO:0008805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CO + H2O + ferrocytochrome b-561 = CO2 + 2 H+ + 2 ferricytochrome b-561.","definition_xrefs":["GOC:curators","RHEA:48880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, cytochrome as acceptor","termid":"GO:0016622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"carbon-monoxide oxygenase activity","secondary_identifiers":["EC:1.2.5.3","Wikipedia:Carbon-monoxide_dehydrogenase_(cytochrome_b-561)","GO:0018999","UM-BBD_reactionID:r0650","MetaCyc:RXN-21452","GO:0047767"],"synonyms":[{"name":"carbon monoxide oxidase activity","type":"related"},{"name":"carbon monoxide oxygenase (cytochrome b-561) activity","type":"narrow"},{"name":"carbon monoxide oxygenase activity","type":"exact"},{"name":"carbon monoxide,water:cytochrome b-561 oxidoreductase activity","type":"related"},{"name":"carbon monoxide:methylene blue oxidoreductase activity","type":"narrow"},{"name":"carbon-monoxide dehydrogenase (cytochrome b-561)","type":"related"},{"name":"cytochrome b561","type":"narrow"}],"termid":"GO:0008805"}


id: PATO:0000129
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000129 absolute weight (obsolete PATO:0000129)","termid":"PATO:0000129"}


id: PBO:0079296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 13","termid":"PBO:0079296"}


id: GO:2000718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maintenance of mitotic sister chromatid cohesion in the centromeric region.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of maintenance of mitotic sister chromatid cohesion","termid":"GO:0034182"},{"relation_name":"is_a","term_name":"regulation of centromeric sister chromatid cohesion","termid":"GO:0070602"},{"relation_name":"regulates","term_name":"maintenance of mitotic sister chromatid cohesion, centromeric","termid":"GO:0071960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of maintenance of mitotic sister chromatid cohesion, centromeric","synonyms":[{"name":"regulation of maintenance of centromeric mitotic sister chromatin cohesion","type":"exact"},{"name":"regulation of maintenance of mitotic sister chromatin cohesion at centromere","type":"exact"},{"name":"regulation of maintenance of sister chromatin cohesion at centromere at mitosis","type":"exact"}],"termid":"GO:2000718"}


id: GO:0060236
data:
  {"annotated_genes":["SJAG_00514","SJAG_02332","SJAG_04464","SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89349],"is_not":false,"summary":null,"term":"GO:0060236"},{"annotations":[110927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"},{"annotations":[110504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901673"},{"annotations":[114547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110162"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the assembly, arrangement of constituent parts, or disassembly of the microtubule spindle during a mitotic cell cycle.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spindle organization","termid":"GO:0090224"},{"relation_name":"regulates","term_name":"mitotic spindle organization","termid":"GO:0007052"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00514":null,"SJAG_02332":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0007049","GO:0000226"],"is_obsolete":false,"name":"regulation of mitotic spindle organization","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-380320"],"synonyms":[{"name":"regulation of mitotic spindle organisation","type":"exact"},{"name":"regulation of mitotic spindle organization and biogenesis","type":"related"}],"termid":"GO:0060236","terms_by_termid":{"GO:0060236":null,"GO:0110161":null,"GO:0110162":null,"GO:1901673":null}}


id: GO:0061781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Negative regulation of sister chromatid cohesion by the topological unlinking of a cohesin ring to DNA as part of the mitotic cell cycle.","definition_xrefs":["GOC:mah","GOC:dph","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic cohesin unloading (obsolete GO:0061781)","termid":"GO:0061781"}


id: PBO:0004032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocon subunit Sec61 homolog (predicted)","termid":"PBO:0004032"}


id: MONDO:0060502
data:
  {"annotated_genes":["SJAG_00312"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85013],"is_not":false,"summary":null,"term":"MONDO:0060502"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0002320"],"is_obsolete":false,"name":"neurodevelopmental disorder with progressive microcephaly, spasticity, and brain anomalies","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4479631","GARD:17960","OMIM:617527","Orphanet:521426","MEDGEN:1380260"],"synonyms":[{"name":"NDMSBA","type":"related"},{"name":"neurodevelopmental disorder with progressive microcephaly, spasticity, and brain anomalies","type":"exact"}],"termid":"MONDO:0060502","terms_by_termid":{"MONDO:0060502":null},"xrefs":{"Monarch":{"xref_id":"0060502"}}}


id: PBO:0028185
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_glutathione_gamma-glutamylcysteinyltransferase_activity","termid":"PBO:0028185"}


id: GO:0061926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the formation of radial glial cell scaffolds.","definition_xrefs":["PMID:22076441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell morphogenesis","termid":"GO:0010770"},{"relation_name":"is_a","term_name":"regulation of formation of radial glial scaffolds","termid":"GO:0061924"},{"relation_name":"positively_regulates","term_name":"formation of radial glial scaffolds","termid":"GO:0021943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of formation of radial glial scaffolds","synonyms":[{"name":"positive regulation of Bergmann fiber biosynthesis","type":"related"},{"name":"positive regulation of Bergmann fiber formation","type":"related"},{"name":"positive regulation of radial glial scaffold formation","type":"exact"}],"termid":"GO:0061926"}


id: MONDO:1011627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoclonus epilepsy of Lafora, non-human animal","secondary_identifiers":["OMIA:000690"],"termid":"MONDO:1011627","xrefs":{"Monarch":{"xref_id":"1011627"}}}


id: GO:0106054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: uridine34 in tRNA + a [TusE sulfur carrier protein]-S-sulfanylcysteine + ATP + a reduced electron acceptor = a 2-thiouridine34 in tRNA + a [TusE sulfur carrier protein]-L-cysteine + AMP + an oxidized electron acceptor + diphosphate + H+.","definition_xrefs":["PMID:16387657","PMID:12549933"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA-uracil-34 sulfurtransferase activity (obsolete GO:0106054)","synonyms":[{"name":"tRNA U34 2-thiouridylase","type":"exact"},{"name":"tRNA U34 thiol-transferase activity","type":"exact"},{"name":"tRNA-specific 2-thiouridylase","type":"related"}],"termid":"GO:0106054"}


id: PBO:0039539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 36C","termid":"PBO:0039539"}


id: MONDO:0012991
data:
  {"annotated_genes":["SJAG_04954"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84936],"is_not":false,"summary":null,"term":"MONDO:0012991"}]},"cv_name":"mondo","definition":"An autosomal recessive disease that is characterized by mental retardation, cataracts, coloboma, kyphosis, and coarse facial features and has material basis in mutation in the SRD5A3 gene.","definition_xrefs":["DOID:0050807","OMIM:612713","Orphanet:168972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Kahrizi syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C2675185","MEDGEN:382543","MESH:C567196"],"synonyms":[{"name":"KHRZ","type":"related"},{"name":"Kahrizi syndrome","type":"exact"},{"name":"intellectual disability, cataract, coloboma, and kyphosis, autosomal recessive","type":"related"},{"name":"mental retardation, cataract, coloboma, and kyphosis, autosomal recessive","type":"related"}],"termid":"MONDO:0012991","terms_by_termid":{"MONDO:0012991":null},"xrefs":{"Monarch":{"xref_id":"0012991"}}}


id: GO:0021680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cerebellar Purkinje cell layer over time, from its formation to the mature structure. The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells.","definition_xrefs":["GOC:cls","GOC:dph","GO_REF:0000021","GOC:dgh","ISBN:0838580343","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"cerebellar cortex development","termid":"GO:0021695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar Purkinje cell layer development","termid":"GO:0021680"}


id: PBO:0012575
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S phase delayed","termid":"PBO:0012575"}


id: GO:1902556
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of phosphatidylinositol transporter activity.","definition_xrefs":["GOC:bhm","GOC:TermGenie","PMID:9890948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter complex","termid":"GO:1990351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"phosphatidylinositol transporter complex","termid":"GO:1902556"}


id: PBO:0031501
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_fatty_acid_synthase_activity","termid":"PBO:0031501"}


id: SO:0001616
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes a fusion of two polypeptide sequences.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_sequence_variant","termid":"SO:0001603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide_fusion","synonyms":[{"name":"polypeptide fusion","type":"exact"}],"termid":"SO:0001616"}


id: MOD:00425
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces one hydrogen atom with a hydroxyl group.","definition_xrefs":["Unimod:35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxylated residue","termid":"MOD:00677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monohydroxylated residue","synonyms":[{"name":"Hy1Res","type":"exact"},{"name":"Oxidation","type":"related"},{"name":"Oxidation or Hydroxylation","type":"related"}],"termid":"MOD:00425"}


id: PBO:0041367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 4 open reading frame 45","termid":"PBO:0041367"}


id: MONDO:1011510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glaucoma that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glaucoma, non-human animal","termid":"MONDO:1011457"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glaucoma, dog","secondary_identifiers":["OMIA:000411-9615"],"termid":"MONDO:1011510","xrefs":{"Monarch":{"xref_id":"1011510"}}}


id: PBO:0076580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 4","termid":"PBO:0076580"}


id: GO:0046237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of phenanthrene, a tricyclic aromatic hydrocarbon.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete phenanthrene biosynthetic process (obsolete GO:0046237)","synonyms":[{"name":"phenanthrene anabolism","type":"exact"},{"name":"phenanthrene biosynthesis","type":"exact"},{"name":"phenanthrene biosynthetic process","type":"exact"},{"name":"phenanthrene formation","type":"exact"},{"name":"phenanthrene synthesis","type":"exact"}],"termid":"GO:0046237"}


id: MONDO:0000884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myeloid and lymphoid neoplasms associated with FGFR1 abnormalities (obsolete MONDO:0000884)","termid":"MONDO:0000884","xrefs":{"Monarch":{"xref_id":"0000884"}}}


id: PBO:0050933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 2","termid":"PBO:0050933"}


id: GO:1901638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any copper ion import that takes place in ascospore-type prospore.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete copper ion import into ascospore-type prospore (obsolete GO:1901638)","synonyms":[{"name":"copper ion import into ascospore-type prospore","type":"exact"},{"name":"copper ion uptake in ascospore-type prospore","type":"exact"}],"termid":"GO:1901638"}


id: PBO:0084921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Monoacylglycerol and triacylglycerol lipase; MAG lipase with preference for palmitoyl-MAG; TAG lipase involved in TAG catabolism; minor role in medium-chain fatty acid ethyl ester biosynthesis; contains an alpha/beta hydrolase domain and a typical lipase motif (GXSXG); similar to acyltransferases, Eeb1p, Eht1p, and human ABHD1","termid":"PBO:0084921"}


id: PR:O60155
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- prs1 gene.","definition_xrefs":["UniProtKB:O60155","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline--tRNA ligase C19C7.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C7.06","synonyms":[{"name":"ProRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-prs1","type":"exact"},{"name":"prolyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60155"}


id: FYPO:0007117
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to leucine starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during cellular response to leucine starvation","synonyms":[{"name":"decreased RNA accumulation during cellular response to leucine starvation","type":"related"},{"name":"decreased RNA level during cellular response to leucine depletion","type":"exact"},{"name":"decreased RNA level during cellular response to leucine deprivation","type":"exact"},{"name":"decreased RNA level during cellular response to leucine starvation during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to leucine starvation during vegetative growth","type":"exact"},{"name":"decreased RNA level during leucine starvation","type":"exact"},{"name":"decreased mRNA level during cellular response to leucine starvation","type":"narrow"},{"name":"decreased transcript level during cellular response to leucine starvation","type":"exact"},{"name":"reduced RNA level during cellular response to leucine starvation","type":"exact"}],"termid":"FYPO:0007117"}


id: GO:2000306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of photomorphogenesis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photomorphogenesis","termid":"GO:0010099"},{"relation_name":"is_a","term_name":"positive regulation of post-embryonic development","termid":"GO:0048582"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"positively_regulates","term_name":"photomorphogenesis","termid":"GO:0009640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of photomorphogenesis","synonyms":[{"name":"positive regulation of plant development in response to light","type":"exact"}],"termid":"GO:2000306"}


id: PBO:0059461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesogenin 1","termid":"PBO:0059461"}


id: GO:0006613
data:
  {"annotated_genes":["SJAG_01733","SJAG_01840","SJAG_01558","SJAG_02456","SJAG_00959","SJAG_02330","SJAG_00175","SJAG_01282","SJAG_03411","SJAG_00360","SJAG_02208","SJAG_01759","SJAG_03684","SJAG_00064","SJAG_04129"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97404],"is_not":false,"summary":null,"term":"GO:0006613"},{"annotations":[109122,115427,116138,90310,109247,93765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006614"},{"annotations":[113860,91113,114627],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006617"},{"annotations":[108826,115428,97545,105661,102084,107797],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006616"}]},"cv_name":"biological_process","definition":"The targeting of proteins to a membrane that occurs during translation. The transport of most secretory proteins, particularly those with more than 100 amino acids, into the endoplasmic reticulum lumen occurs in this manner, as does the import of some proteins into mitochondria.","definition_xrefs":["PMID:16896215","ISBN:0716731363","PMID:10512867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein targeting to membrane","termid":"GO:0006612"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00175":null,"SJAG_00360":null,"SJAG_00959":null,"SJAG_01282":null,"SJAG_01558":null,"SJAG_01733":null,"SJAG_01759":null,"SJAG_01840":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02456":null,"SJAG_03411":null,"SJAG_03684":null,"SJAG_04129":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006605","GO:0008150"],"is_obsolete":false,"name":"cotranslational protein targeting to membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cotranslational membrane targeting","type":"exact"},{"name":"cotranslational protein membrane targeting","type":"exact"},{"name":"cotranslational protein-membrane targeting","type":"exact"}],"termid":"GO:0006613","terms_by_termid":{"GO:0006613":null,"GO:0006614":null,"GO:0006616":null,"GO:0006617":null}}


id: PBO:0077588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymopoietin pseudogene 1","termid":"PBO:0077588"}


id: MONDO:0015458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intellectual disability-hypoplastic corpus callosum-preauricular tag syndrome is characterized by a hypoplastic corpus callosum, microcephaly, severe intellectual deficit, preauricular skin tags, camptodactyly, growth retardation, and recurrent bronchopneumonia. It has been described in four patients in two families. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:1495"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability-hypoplastic corpus callosum-preauricular tag syndrome","secondary_identifiers":["MEDGEN:928199","GARD:12487","UMLS:C4302530","SCTID:722455002"],"synonyms":[{"name":"Da Silva syndrome","type":"exact"},{"name":"intellectual disability - hypoplastic corpus callosum - preauricular tag","type":"related"}],"termid":"MONDO:0015458","xrefs":{"Monarch":{"xref_id":"0015458"}}}


id: PBO:0070708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 13","termid":"PBO:0070708"}


id: PBO:0063699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate kinase 2","termid":"PBO:0063699"}


id: PR:Q10990
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdt2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10990"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle protein cdt2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.19c","synonyms":[{"name":"Spom972h-cdt2","type":"exact"}],"termid":"PR:Q10990"}


id: PBO:0044320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c, somatic","termid":"PBO:0044320"}


id: MONDO:0008885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extremely rare multiple congenital anomalies/dysmorphic syndrome, described in three boys from one family, and characterized by intellectual disability, hypertelorism, broad and flat nasal bridge, maxillary hypoplasia, mandibular prognathism, bifid uvula or partial cleft palate, multiple dental cysts, Schmorl nodes, fused cervical spinous processes, pectus excavatum, and penoscrotal hypospadias. There have been no further descriptions in the literature since 1971.","definition_xrefs":["Orphanet:1299"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Elsahy-Waters syndrome","secondary_identifiers":["OMIM:211380","Orphanet:157788","MEDGEN:923028","MESH:C566373","OMIM:603463","SCTID:719097002","GARD:955","UMLS:C0809936","MESH:C537084","DOID:0080631"],"synonyms":[{"name":"BSG syndrome","type":"exact"},{"name":"ELSAHY-Waters syndrome","type":"exact"},{"name":"ESWS","type":"exact"},{"name":"Elsahy-Waters syndrome","type":"exact"},{"name":"brachioskeletogenital syndrome","type":"exact"},{"name":"branchio-skeleto-genital syndrome","type":"related"},{"name":"hypospadias, hypertelorism, upper 51D coloboma, and mixed-type hearing loss","type":"exact"},{"name":"hypospadias, hypertelorism, upper lid coloboma, and mixed-type hearing loss","type":"exact"},{"name":"hypospadias-hypertelorism-coloboma and deafness syndrome","type":"exact"}],"termid":"MONDO:0008885","xrefs":{"Monarch":{"xref_id":"0008885"}}}


id: GO:0045320
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A proton-transporting ATP synthase complex found in the chloroplast thylakoid membrane; it catalyzes the phosphorylation of ADP to ATP during photo-phosphorylation.","definition_xrefs":["GOC:mtg_sensu","GOC:pj","ISBN:0716743663"],"gene_count":0,"genotype_count":0,"name":"obsolete chloroplast proton-transporting ATP synthase complex (obsolete GO:0045320)","synonyms":[{"name":"chloroplast hydrogen-translocating F-type ATPase complex","type":"exact"},{"name":"chloroplast proton-transporting F-type ATPase complex","type":"exact"},{"name":"hydrogen-translocating F-type ATPase complex","type":"broad"}],"termid":"GO:0045320"}


id: PBO:0045373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPH6 divergent transcript","termid":"PBO:0045373"}


id: GO:0051366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a protein amino acid by formation of an ester or amide with decanoic acid.","definition_xrefs":["GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein lipidation","termid":"GO:0006497"},{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042158"}],"interesting_parent_ids":["GO:0008150","GO:0042158"],"is_obsolete":false,"name":"protein decanoylation","synonyms":[{"name":"protein amino acid decanoylation","type":"exact"}],"termid":"GO:0051366"}


id: PR:O14144
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erv1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial FAD-linked sulfhydryl oxidase erv1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.08","synonyms":[{"name":"Spom972h-erv1","type":"exact"}],"termid":"PR:O14144"}


id: PBO:0003309
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial myopathy","termid":"PBO:0003309"}


id: PBO:0110378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL9R pseudogene 4","termid":"PBO:0110378"}


id: PBO:0040215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase family AAA domain containing 2B","termid":"PBO:0040215"}


id: PBO:0017887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase kink, Knk1","termid":"PBO:0017887"}


id: PBO:0001429
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lap-Emerin-Man domain protein","termid":"PBO:0001429"}


id: PBO:0073456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant associated 2","termid":"PBO:0073456"}


id: PR:O59675
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps902 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59675"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S9-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.12","synonyms":[{"name":"Spom972h-rps902","type":"exact"}],"termid":"PR:O59675"}


id: MONDO:0016764
data:
  {"annotated_genes":["SJAG_03497","SJAG_03786"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014050"},{"annotations":[86165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013783"}]},"cv_name":"mondo","definition":"Anophthalmia and microphthalmia describe, respectively, the absence of an eye and the presence of a small eye within the orbit.","definition_xrefs":["Orphanet:2542"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic developmental defect of the eye (obsolete MONDO:0015217)","termid":"MONDO:0015217"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03497":null,"SJAG_03786":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated anophthalmia-microphthalmia syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:12085","MEDGEN:1826144","UMLS:C5679828"],"synonyms":[{"name":"MAC spectrum","type":"exact"},{"name":"clinical anophthalmia","type":"related"},{"name":"isolated anophthalmia - microphthalmia","type":"related"},{"name":"isolated pure microphthalmia","type":"related"},{"name":"microphthalmia-anophthalmia-coloboma spectrum","type":"exact"},{"name":"nonsyndromic anophthalmia-microphthalmia syndrome","type":"exact"},{"name":"primitive anophthalmia","type":"related"}],"termid":"MONDO:0016764","terms_by_termid":{"MONDO:0013783":null,"MONDO:0014050":null},"xrefs":{"Monarch":{"xref_id":"0016764"}}}


id: GO:0018750
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: biuret + H2O = urea + CO2 + NH3.","definition_xrefs":["EC:3.5.1.84"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"biuret amidohydrolase activity","secondary_identifiers":["UM-BBD_reactionID:r0846","RHEA:17525"],"termid":"GO:0018750"}


id: PBO:0000822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSD domain protein, unknown biological role","termid":"PBO:0000822"}


id: GO:0141069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and decreases the activity of the ligand of a signaling receptor.","definition_xrefs":["PMID:12478285","PMID:1721860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular function inhibitor activity","termid":"GO:0140678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140678","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"receptor ligand inhibitor activity","synonyms":[{"name":"signaling receptor ligand inhibitor activity","type":"exact"}],"termid":"GO:0141069"}


id: GO:0120136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + dUMP = ADP + dUDP.","definition_xrefs":["PMID:3010881","RHEA:30655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UMP/dUMP kinase activity","termid":"GO:0009041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dUMP kinase activity","synonyms":[{"name":"ATP:dUMP phosphotransferase activity","type":"exact"},{"name":"dUMP-kinase activity","type":"exact"},{"name":"deoxyuridine monophosphate kinase activity","type":"exact"}],"termid":"GO:0120136"}


id: MONDO:0011724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glucose transporter type 1 (GLUT1) deficiency syndrome is characterized by an encephalopathy marked by childhood epilepsy that is refractory to treatment, deceleration of cranial growth leading to microcephaly, psychomotor retardation, spasticity, ataxia, dysarthria and other paroxysmal neurological phenomena often occurring before meals. Symptoms appear between the age of 1 and 4 months, following a normal birth and gestation.","definition_xrefs":["Orphanet:71277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GLUT1 deficiency syndrome","termid":"MONDO:0000188"},{"relation_name":"is_a","term_name":"glucose transport disorder","termid":"MONDO:0019226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0005027"],"is_obsolete":false,"name":"encephalopathy due to GLUT1 deficiency","secondary_identifiers":["OMIM:606777","icd11.foundation:1231079185","NANDO:1200799","UMLS:C4551966","MESH:C536830","DOID:0070561","MEDGEN:1645412","NANDO:2200545","NORD:1188","GARD:9265"],"synonyms":[{"name":"De Vivo disease","type":"exact"},{"name":"G1D","type":"related"},{"name":"GLUT1 DS","type":"related"},{"name":"GLUT1 deficiency syndrome","type":"related"},{"name":"GLUT1 deficiency syndrome 1","type":"related"},{"name":"GLUT1 deficiency syndrome 1, autosomal recessive","type":"related"},{"name":"GLUT1 deficiency syndrome 1, infantile onset, severe","type":"exact"},{"name":"GLUT1 deficiency syndrome type 1","type":"exact"},{"name":"GLUT1-DS","type":"exact"},{"name":"GLUT1DS1","type":"related"},{"name":"Glucose Transporter Type 1 Deficiency Syndrome","type":"exact"},{"name":"encephalopathy due to GLUT1 deficiency","type":"exact"},{"name":"glucose TRANSPORT defect, blood-brain barrier GLUT1 deficiency syndrome 1, autosomal recessive, included","type":"related"},{"name":"glucose Transport defect, blood-brain barrier","type":"related"},{"name":"glucose transport defect, blood-brain barrier","type":"related"},{"name":"glucose transporter Protein syndrome","type":"related"},{"name":"glucose transporter protein syndrome","type":"related"},{"name":"glucose transporter type 1 deficiency","type":"exact"},{"name":"glucose transporter type 1 deficiency syndrome","type":"related"},{"name":"glucose transporter type1 (glut-1) deficiency","type":"related"},{"name":"glut-1 deficiency syndrome","type":"exact"}],"termid":"MONDO:0011724","xrefs":{"Monarch":{"xref_id":"0011724"}}}


id: PBO:0029654
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_heat_shock","termid":"PBO:0029654"}


id: PBO:0044998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIAPH3 antisense RNA 1","termid":"PBO:0044998"}


id: SO:1001270
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1001270 stop_codon_redefinition_as_pyrrolysine (obsolete SO:1001270)","termid":"SO:1001270"}


id: MONDO:0016848
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Juvenile temporal arteritis is a rare form of vasculitis, a group of conditions that cause inflammation of the blood vessels. Unlike the classic form of temporal arteritis, this condition is generally diagnosed in late childhood or early adulthood and only affects the temporal arteries (located at the lower sides of the skull, directly underneath the temple). Affected people often have no signs or symptoms aside from a painless nodule or lump in the temporal region. The exact underlying cause of the condition is unknown. It generally occurs sporadically in people with no family history of the condition. Juvenile temporal arteritis is often treated with surgical excision and rarely recurs.","direct_ancestors":[{"relation_name":"is_a","term_name":"arteritis","termid":"MONDO:0043494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"juvenile temporal arteritis","secondary_identifiers":["icd11.foundation:135739104","SCTID:722020006","UMLS:C0751547","MEDGEN:155583","GARD:3068","Orphanet:26137"],"synonyms":[{"name":"JGCA","type":"related"},{"name":"JPMR","type":"related"},{"name":"JTA","type":"exact"},{"name":"juvenile cranial arteritis","type":"related"},{"name":"juvenile giant cell arteritis","type":"related"},{"name":"juvenile polymyalgia rheumatica","type":"related"},{"name":"non-giant cell granulomatous temporal arteritis with eosinophilia","type":"exact"}],"termid":"MONDO:0016848","xrefs":{"Monarch":{"xref_id":"0016848"}}}


id: PATO:0002168
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angular placement quality inhering in a bearer by virtue of the bearer being changed in position in relation to another entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"displaced to","synonyms":[{"name":"mislocalised to","type":"related"}],"termid":"PATO:0002168"}


id: PBO:0091814
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIR ANtagonist","termid":"PBO:0091814"}


id: MONDO:0859518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukodystrophy, hypomyelinating, 26, with chondrodysplasia","secondary_identifiers":["MEDGEN:1840948","UMLS:C5830312","DOID:0070403","OMIM:620269"],"termid":"MONDO:0859518","xrefs":{"Monarch":{"xref_id":"0859518"}}}


id: GO:0032391
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the photoreceptor cell cilium linking the photoreceptor inner and outer segments. It's considered to be equivalent to the ciliary transition zone.","definition_xrefs":["PMID:8718680","GOC:cilia","PMID:15917207","PMID:22653444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary transition zone","termid":"GO:0035869"},{"relation_name":"part_of","term_name":"photoreceptor cell cilium","termid":"GO:0097733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"photoreceptor connecting cilium","synonyms":[{"name":"photoreceptor cilium","type":"related"}],"termid":"GO:0032391"}


id: PBO:0002079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S5 (predicted)","termid":"PBO:0002079"}


id: PBO:0091269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary transcript for snoZ3,Z4,Z5,Z7,Z8","termid":"PBO:0091269"}


id: MONDO:0008028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy","termid":"MONDO:0020121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy, Barnes type","secondary_identifiers":["MESH:C563558","OMIM:158800","UMLS:C1834688","MEDGEN:322468"],"synonyms":[{"name":"muscular dystrophy, Barnes type","type":"exact"}],"termid":"MONDO:0008028","xrefs":{"Monarch":{"xref_id":"0008028"}}}


id: PBO:0065741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PXN antisense RNA 1","termid":"PBO:0065741"}


id: MONDO:0044220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood group, 1 system (obsolete MONDO:0044220)","secondary_identifiers":["OMIM:110800"],"synonyms":[{"name":"I blood Group system","type":"related"},{"name":"II","type":"related"},{"name":"II blood Group system","type":"related"},{"name":"adult I phenotype","type":"related"},{"name":"blood group, I system","type":"related"},{"name":"blood group, Ii","type":"exact"}],"termid":"MONDO:0044220","xrefs":{"Monarch":{"xref_id":"0044220"}}}


id: MONDO:0100505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermatitis caused by an allergic reaction to ingested food.","definition_xrefs":["NCIT:C34534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"food dermatitis","synonyms":[{"name":"dermatitis due to food taken internally","type":"exact"}],"termid":"MONDO:0100505","xrefs":{"Monarch":{"xref_id":"0100505"}}}


id: FYPO:0006349
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at one or more specific promoter elements is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to chromatin during vegetative growth","termid":"FYPO:0001508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to chromatin at promoter","synonyms":[{"name":"abolished protein localisation to chromatin at promoter during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromatin at promoter during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to chromatin at promoter element","type":"exact"},{"name":"protein localization to chromatin at promoter abolished","type":"exact"}],"termid":"FYPO:0006349"}


id: PBO:0039355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidohydrolase domain containing 1","termid":"PBO:0039355"}


id: PBO:0087046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L21B; homologous to mammalian ribosomal protein L21, no bacterial homolog; RPL21B has a paralog, RPL21A, that arose from the whole genome duplication","termid":"PBO:0087046"}


id: PBO:0071462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 3","termid":"PBO:0071462"}


id: PBO:0066787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 86","termid":"PBO:0066787"}


id: FYPO:0006905
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which a mitotic cell size control checkpoint is normal (i.e. indistinguishable from wild type). A mitotic cell size control checkpoint normally prevents cell cycle progression from G1 to S phase until the cell reaches a certain size.","definition_xrefs":["GO:0031568","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell size control checkpoint","termid":"FYPO:0006904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000298","FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal mitotic G1 cell size control checkpoint","synonyms":[{"name":"normal G1 cell size control checkpoint during mitotic cell cycle","type":"exact"},{"name":"normal mitotic G1 cell size control checkpoint activation","type":"exact"},{"name":"normal mitotic G1 cell size control checkpoint during vegetative growth","type":"exact"}],"termid":"FYPO:0006905"}


id: MONDO:0800195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achalasia-alacrima syndrome","synonyms":[{"name":"AAAS","type":"exact"}],"termid":"MONDO:0800195","xrefs":{"Monarch":{"xref_id":"0800195"}}}


id: GO:0097091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in grouping synaptic vesicles in presynaptic structures.","definition_xrefs":["PMID:7568108","GOC:ans","GOC:pr","PMID:19900895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic vesicle localization","termid":"GO:0097479"},{"relation_name":"part_of","term_name":"synaptic vesicle cycle","termid":"GO:0099504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"synaptic vesicle clustering","termid":"GO:0097091"}


id: GO:0038045
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing latency-associated proteins (LAPs), mature disulphide-linked dimeric TGF-beta, and latent TGF-beta binding proteins (LTBPs). TGF-beta is mostly secreted as part of the large latent complex, and must be subsequently released from the LLC in order to bind to cell surface receptors.","definition_xrefs":["PMID:2350783","GOC:bf","PMID:8680476","PMID:9805445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"large latent transforming growth factor-beta complex","synonyms":[{"name":"LLC","type":"exact"},{"name":"large latent complex","type":"exact"}],"termid":"GO:0038045"}


id: PBO:0058542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6088","termid":"PBO:0058542"}


id: GO:0030115
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A crystalline protein layer surrounding some bacteria.","definition_xrefs":["GOC:mlg","ISBN:0815108893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure","termid":"GO:0030312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"S-layer","secondary_identifiers":["Wikipedia:S-layer"],"termid":"GO:0030115"}


id: MONDO:0014825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 11","termid":"MONDO:0016893"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11p13 deletion syndrome, distal","secondary_identifiers":["UMLS:C4311047","MEDGEN:935014","OMIM:616902"],"termid":"MONDO:0014825","xrefs":{"Monarch":{"xref_id":"0014825"}}}


id: PBO:0017646
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"although this is demonstrated to be DNA polymerase epsilon interactor and named Dpb3, it appears to be the ortholog of S. cerevisie BUR6 and human DRAP1. The Dpb3 ortholog appears to be the recently identified SPCC16C4.22 date=20120829","termid":"PBO:0017646"}


id: PBO:0038487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABCB10 pseudogene 3","termid":"PBO:0038487"}


id: MOD:00271
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between two cysteine residues, the C-3' of a tyrosine residue, and the porphyrin compound heme b, (7,12-diethenyl-3,8,13,17-tetramethylporphyrin-2,18-dipropanoato)iron.","definition_xrefs":["PubMed:8325841","PubMed:9095195","RESID:AA0266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin modified residue","termid":"MOD:00699"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-tyrosine residue","termid":"MOD:02075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"heme P460-bis-L-cysteine-L-tyrosine","synonyms":[{"name":"(10S,11S)-[7,12-bis((S)-1-[((R)-2-amino-2-carboxy)ethylsulfanyl]ethyl)-10-(2-hydroxy-5-[(S)-2-amino-2-carboxy]ethylphenyl)-3,8,13,17-tetramethyl-21H,23H-10,11-dihydroporphine-2,18-bis(2-carboxyethyl)-N21,N22,N23,N24]-ferrate","type":"exact"},{"name":"BINDING Heme (covalent; via 3 links)","type":"exact"},{"name":"bis(S-cysteinyl)-(tyros-3'-yl)-heme","type":"exact"},{"name":"heme P460-bis-L-cysteine-L-tyrosine","type":"exact"}],"termid":"MOD:00271"}


id: MONDO:0009705
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Carnitine palmitoyltransferase 1A (CPT-1A) deficiency is an inborn error of metabolism that affects mitochondrial oxidation of long chain fatty acids (LCFA) in the liver and kidneys, and is characterized by recurrent attacks of fasting-induced hypoketotic hypoglycemia and risk of liver failure.","definition_xrefs":["Orphanet:156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of carnitine cycle and carnitine transport","termid":"MONDO:0017716"},{"relation_name":"is_a","term_name":"inherited fatty acid metabolism disorder","termid":"MONDO:0037858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"carnitine palmitoyl transferase 1A deficiency","secondary_identifiers":["HGNC:2328","MEDGEN:316820","NANDO:2200509","NCIT:C98871","ICD9:277.85","SCTID:238001003","UMLS:C1829703","MESH:C535588","GARD:1120","NORD:894","OMIM:255120","NANDO:1200970","DOID:0090129"],"synonyms":[{"name":"CPT 1 deficiency","type":"related"},{"name":"CPT I deficiency","type":"exact"},{"name":"CPT deficiency, hepatic, type 1","type":"related"},{"name":"CPT1A deficiency","type":"exact"},{"name":"CPT1A disorder of carnitine cycle and carnitine transport","type":"exact"},{"name":"Carnitine Palmitoyltransferase 1 deficiency","type":"related"},{"name":"Carnitine Palmitoyltransferase 1A Deficiency","type":"exact"},{"name":"Carnitine Palmitoyltransferase 1A deficiency","type":"related"},{"name":"Carnitine palmitoyl transferase 1 deficiency","type":"related"},{"name":"Carnitine palmitoyl transferase IA deficiency","type":"exact"},{"name":"Carnitine palmitoyltransferase 1A deficiency","type":"related"},{"name":"L-CPT 1 deficiency","type":"related"},{"name":"L-CPT1 deficiency","type":"exact"},{"name":"L-CPTI deficiency","type":"exact"},{"name":"carnitine palmitoyl transferase 1A deficiency","type":"exact"},{"name":"carnitine palmitoyl transferase IA deficiency","type":"exact"},{"name":"carnitine palmitoyltransferase I deficiency","type":"exact"},{"name":"cpt deficiency, hepatic, type IA","type":"exact"},{"name":"disorder of carnitine cycle and carnitine transport caused by mutation in CPT1A","type":"exact"},{"name":"hepatic CPT deficiency type I","type":"exact"},{"name":"hepatic CPT1","type":"related"},{"name":"hepatic carnitine palmitoyl transferase 1 deficiency","type":"exact"},{"name":"hepatic carnitine palmitoyl transferase I deficiency","type":"exact"},{"name":"hepatic carnitine palmitoyltransferase 1 deficiency","type":"related"}],"termid":"MONDO:0009705","xrefs":{"Monarch":{"xref_id":"0009705"}}}


id: PBO:0045806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early endosome antigen 1","termid":"PBO:0045806"}


id: GO:0052410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving chitin in the cell wall of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont cell wall chitin (obsolete GO:0052410)","termid":"GO:0052410"}


id: MONDO:0044969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disease of membrane bound organelle (obsolete MONDO:0044969)","termid":"MONDO:0044969","xrefs":{"Monarch":{"xref_id":"0044969"}}}


id: PBO:0031526
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_DNA-1,N6-ethenoadenine_N-glycosylase_activity","termid":"PBO:0031526"}


id: PBO:0050346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 49","termid":"PBO:0050346"}


id: PBO:0065802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB1A pseudogene 2","termid":"PBO:0065802"}


id: FYPO:0004632
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during the second meiotic nuclear division is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during meiosis","termid":"FYPO:0003550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased protein level during meiosis II","synonyms":[{"name":"decreased protein accumulation during meiosis II","type":"related"},{"name":"decreased protein level during second meiotic nuclear division","type":"exact"},{"name":"reduced protein level during meiosis II","type":"exact"}],"termid":"FYPO:0004632"}


id: PBO:0060263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myogenic factor 6","termid":"PBO:0060263"}


id: PBO:0030719
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_wall_alpha-glucan_level","termid":"PBO:0030719"}


id: MONDO:0016593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of ataxia that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cerebellar ataxia","termid":"MONDO:0000437"},{"relation_name":"is_a","term_name":"atactic disorder","termid":"MONDO:0100308"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acquired ataxia","secondary_identifiers":["GARD:20656","SCTID:722968003","icd11.foundation:71197968","Orphanet:247242","MEDGEN:927781","UMLS:C4302112"],"synonyms":[{"name":"acquired ataxia","type":"exact"}],"termid":"MONDO:0016593","xrefs":{"Monarch":{"xref_id":"0016593"}}}


id: MONDO:0100277
data:
  {"annotated_genes":["SJAG_00326"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009958"}]},"cv_name":"mondo","definition":"Any peroxisomal single enzyme/protein defect that has its basis in the disruption of peroxisomal alpha oxidatiion.","definition_xrefs":["MONDO:patterns/disrupts_process"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisomal single enzyme/protein defect","termid":"MONDO:0100257"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00326":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0005066"],"is_obsolete":false,"name":"disorder of peroxisomal alpha oxidation","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"disorder of peroxisomal alpha oxidation","type":"exact"}],"termid":"MONDO:0100277","terms_by_termid":{"MONDO:0009958":null},"xrefs":{"Monarch":{"xref_id":"0100277"}}}


id: MONDO:0004243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelioid sarcoma of the proximal type involving the vulva.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal-type epithelioid sarcoma","termid":"MONDO:0004244"},{"relation_name":"is_a","term_name":"vulva sarcoma","termid":"MONDO:0005214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vulvar proximal-type epithelioid sarcoma","secondary_identifiers":["DOID:7491","UMLS:C1520093","MEDGEN:276995","NCIT:C40319"],"termid":"MONDO:0004243","xrefs":{"Monarch":{"xref_id":"0004243"}}}


id: GO:0042092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response which is associated with resistance to extracellular organisms such as helminths and pathological conditions such as allergy, which is orchestrated by the production of particular cytokines, most notably IL-4, IL-5, IL-10, and IL-13, by any of a variety of cell types including T-helper 2 cells, eosinophils, basophils, mast cells, and nuocytes, resulting in enhanced production of certain antibody isotypes and other effects.","definition_xrefs":["PMID:20065995","ISBN:0781735149","PMID:18000958","GOC:add","PMID:18007680","PMID:20200518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type 2 immune response","synonyms":[{"name":"T-helper 2 type immune response","type":"narrow"},{"name":"Th2 immune response","type":"narrow"}],"termid":"GO:0042092"}


id: MONDO:0007882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lattice degeneration of retina leading to retinal detachment","secondary_identifiers":["MESH:C563633","OMIM:150500","UMLS:C1835491","MEDGEN:331989"],"synonyms":[{"name":"lattice degeneration of retina leading to retinal detachment","type":"exact"}],"termid":"MONDO:0007882","xrefs":{"Monarch":{"xref_id":"0007882"}}}


id: GO:0030693
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of a peptide bond on the carboxyl side of an aspartate residue.","definition_xrefs":["PMID:10872455"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase activity (obsolete GO:0030693)","synonyms":[{"name":"caspase activity","type":"exact"},{"name":"caspase-1 activity","type":"narrow"},{"name":"caspase-10 activity","type":"narrow"},{"name":"caspase-2 activity","type":"narrow"},{"name":"caspase-3 activity","type":"narrow"},{"name":"caspase-4 activity","type":"narrow"},{"name":"caspase-5 activity","type":"narrow"},{"name":"caspase-6 activity","type":"narrow"},{"name":"caspase-7 activity","type":"narrow"},{"name":"caspase-8 activity","type":"narrow"},{"name":"caspase-9 activity","type":"narrow"},{"name":"effector caspase activity","type":"narrow"},{"name":"signaling (initiator) caspase activity","type":"narrow"}],"termid":"GO:0030693"}


id: PBO:0053488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 463","termid":"PBO:0053488"}


id: PBO:0031048
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_acetylation","termid":"PBO:0031048"}


id: GO:0070858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of bile acids.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid biosynthetic process","termid":"GO:0010894"},{"relation_name":"is_a","term_name":"regulation of bile acid biosynthetic process","termid":"GO:0070857"},{"relation_name":"is_a","term_name":"negative regulation of bile acid metabolic process","termid":"GO:1904252"},{"relation_name":"negatively_regulates","term_name":"bile acid biosynthetic process","termid":"GO:0006699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"negative regulation of bile acid biosynthetic process","synonyms":[{"name":"down regulation of bile acid biosynthetic process","type":"exact"},{"name":"down-regulation of bile acid biosynthetic process","type":"exact"},{"name":"downregulation of bile acid biosynthetic process","type":"exact"},{"name":"inhibition of bile acid biosynthetic process","type":"narrow"},{"name":"negative regulation of bile acid anabolism","type":"exact"},{"name":"negative regulation of bile acid biosynthesis","type":"exact"},{"name":"negative regulation of bile acid formation","type":"exact"},{"name":"negative regulation of bile acid synthesis","type":"exact"}],"termid":"GO:0070858"}


id: PR:O14033
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29B12.12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C29B12.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.12","synonyms":[{"name":"Spom972h-SPAC29B12.12","type":"exact"}],"termid":"PR:O14033"}


id: PATO:0002244
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A flow rate quality inhering in a substance by virtue of the mass of substance which passes through a given surface per unit time.","direct_ancestors":[{"relation_name":"is_a","term_name":"flow rate","termid":"PATO:0001574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mass flow rate","termid":"PATO:0002244"}


id: GO:1904750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to nucleolus.","definition_xrefs":["GOC:BHF_telomere","GO_REF:0000058","GOC:TermGenie","PMID:24415760","GOC:BHF","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization to nucleus","termid":"GO:1900181"},{"relation_name":"is_a","term_name":"regulation of protein localization to nucleolus","termid":"GO:1904749"},{"relation_name":"negatively_regulates","term_name":"protein localization to nucleolus","termid":"GO:1902570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to nucleolus","synonyms":[{"name":"down regulation of protein localisation in nucleolus","type":"exact"},{"name":"down regulation of protein localisation to nucleolus","type":"exact"},{"name":"down regulation of protein localization in nucleolus","type":"exact"},{"name":"down regulation of protein localization to nucleolus","type":"exact"},{"name":"down-regulation of protein localisation in nucleolus","type":"exact"},{"name":"down-regulation of protein localisation to nucleolus","type":"exact"},{"name":"down-regulation of protein localization in nucleolus","type":"exact"},{"name":"down-regulation of protein localization to nucleolus","type":"exact"},{"name":"downregulation of protein localisation in nucleolus","type":"exact"},{"name":"downregulation of protein localisation to nucleolus","type":"exact"},{"name":"downregulation of protein localization in nucleolus","type":"exact"},{"name":"downregulation of protein localization to nucleolus","type":"exact"},{"name":"inhibition of protein localisation in nucleolus","type":"narrow"},{"name":"inhibition of protein localisation to nucleolus","type":"narrow"},{"name":"inhibition of protein localization in nucleolus","type":"narrow"},{"name":"inhibition of protein localization to nucleolus","type":"narrow"},{"name":"negative regulation of protein localisation in nucleolus","type":"exact"},{"name":"negative regulation of protein localisation to nucleolus","type":"exact"},{"name":"negative regulation of protein localization in nucleolus","type":"exact"}],"termid":"GO:1904750"}


id: MONDO:0013758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant intermediate Charcot-Marie-Tooth disease type E is characterized by the association of Charcot-Marie-Tooth disease (hereditary peripheral neuropathy) with nephropathy. So far, around 15 cases have been described. All patients had proteinuria (with or without microhematuria) at onset and some patients presented with nephrotic syndrome. In the majority of cases, pathological studies revealed glomerulosclerosis. The mode of transmission is unknown.","definition_xrefs":["Orphanet:93114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant intermediate Charcot-Marie-Tooth disease","termid":"MONDO:0019548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease dominant intermediate E","secondary_identifiers":["SCTID:722294004","OMIM:614455","GARD:12011","DOID:0110205","UMLS:C4302667","MEDGEN:928336"],"synonyms":[{"name":"CMTDIE","type":"exact"},{"name":"Charcot-Marie-Tooth disease - nephropathy","type":"related"},{"name":"Charcot-Marie-Tooth disease dominant intermediate E","type":"exact"},{"name":"Charcot-Marie-Tooth disease dominant intermediate type E","type":"exact"},{"name":"Charcot-Marie-Tooth disease, dominant Intermediate type E","type":"exact"},{"name":"Charcot-Marie-Tooth disease, dominant intermediate E","type":"related"},{"name":"Charcot-Marie-Tooth disease-nephropathy syndrome","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy with focal segmental glomerulonephritis","type":"exact"},{"name":"autosomal dominant intermediate Charcot-Marie-Tooth disease type E","type":"exact"}],"termid":"MONDO:0013758","xrefs":{"Monarch":{"xref_id":"0013758"}}}


id: PBO:0051142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-20","termid":"PBO:0051142"}


id: MONDO:0014583
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital myasthenic syndrome characterized by autosomal dominant inheritance of postsynaptic neuromuscular junction defects resulting in prolonged synaptic currents and early-onset progressive muscle weakness that has material basis in heterozygous mutation in the CHRND gene on chromosome 2q37.","definition_xrefs":["DOID:0110666","PMID:25792100","PMID:11782989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic congenital myasthenic syndrome","termid":"MONDO:0020344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 3A","secondary_identifiers":["OMIM:616321","GARD:16084","UMLS:C4225372","MEDGEN:898378"],"synonyms":[{"name":"CMS3A","type":"exact"},{"name":"congenital myasthenic syndrome 3A, slow-channel","type":"exact"},{"name":"congenital myasthenic syndrome type 3A","type":"exact"},{"name":"myasthenic syndrome, congenital, 3A, slow-channel","type":"related"}],"termid":"MONDO:0014583","xrefs":{"Monarch":{"xref_id":"0014583"}}}


id: MONDO:0032766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoalphalipoproteinemia, primary, 2","secondary_identifiers":["DOID:0080958","OMIM:618463","UMLS:C5551172","MEDGEN:1789263"],"synonyms":[{"name":"ApoA-I and apoC-III deficiency, combined","type":"broad"},{"name":"Apolipoprotein A-I Deficiency","type":"related"},{"name":"HYPOALPHALIPOPROTEINEMIA, PRIMARY, 2","type":"exact"},{"name":"High Density Lipoprotein Deficiency","type":"related"},{"name":"hypoalphalipoproteinemia, primary, 2, with or without corneal clouding","type":"exact"}],"termid":"MONDO:0032766","xrefs":{"Monarch":{"xref_id":"0032766"}}}


id: SO:0000006
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region amplified by a PCR reaction.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent","termid":"SO:0000695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCR_product","secondary_identifiers":["http://en.wikipedia.org/wiki/RAPD"],"synonyms":[{"name":"PCR product","type":"exact"},{"name":"amplicon","type":"related"}],"termid":"SO:0000006"}


id: GO:0017070
data:
  {"annotated_genes":["SJAG_04497","SJAG_04898","SJAG_03070","SJAG_00531","SJAG_04117"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92436,96332,97516,108033,116718],"is_not":false,"summary":null,"term":"GO:0017070"}]},"cv_name":"molecular_function","definition":"Binding to a U6 small nuclear RNA (U6 snRNA).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00531":null,"SJAG_03070":null,"SJAG_04117":null,"SJAG_04497":null,"SJAG_04898":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"U6 snRNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0017070","terms_by_termid":{"GO:0017070":null}}


id: PBO:0082412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bifunctional alcohol dehydrogenase and formaldehyde dehydrogenase; formaldehyde dehydrogenase activity is glutathione-dependent; functions in formaldehyde detoxification and formation of long chain and complex alcohols, regulated by Hog1p-Sko1p; protein abundance increases in response to DNA replication stress","termid":"PBO:0082412"}


id: PBO:0044093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member A1","termid":"PBO:0044093"}


id: MONDO:0859173
data:
  {"annotated_genes":["SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85847],"is_not":false,"summary":null,"term":"MONDO:0859173"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial sick sinus syndrome","termid":"MONDO:0012061"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03081":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"sick sinus syndrome 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1794159","UMLS:C5561949","OMIM:619464"],"termid":"MONDO:0859173","terms_by_termid":{"MONDO:0859173":null},"xrefs":{"Monarch":{"xref_id":"0859173"}}}


id: PBO:0004713
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tel Two Interacting protein","termid":"PBO:0004713"}


id: PBO:0063884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class N","termid":"PBO:0063884"}


id: GO:0000710
data:
  {"annotated_genes":["SJAG_02187","SJAG_01832"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91244,107241],"is_not":false,"summary":null,"term":"GO:0000710"}]},"cv_name":"biological_process","definition":"A system for the identification and correction of base-base mismatches, small insertion-deletion loops, and regions of heterology that are present in duplex DNA formed with strands from two recombining molecules. Correction of the mismatch can result in non-Mendelian segregation of alleles following meiosis.","definition_xrefs":["PMID:10357855","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair","termid":"GO:0006298"},{"relation_name":"is_a","term_name":"meiosis I cell cycle process","termid":"GO:0061982"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01832":null,"SJAG_02187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0007049","GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"meiotic mismatch repair","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000710","terms_by_termid":{"GO:0000710":null}}


id: GO:0033222
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the D- or L-enantiomer of xylose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide binding","termid":"GO:0048029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"xylose binding","termid":"GO:0033222"}


id: PBO:0060361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myogenin","termid":"PBO:0060361"}


id: FYPO:0004224
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 20 of histone H4 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone methylation during vegetative growth","termid":"FYPO:0000870"},{"relation_name":"is_a","term_name":"abnormal histone H4-K20 methylation during vegetative growth","termid":"FYPO:0004215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased histone H4-K20 trimethylation during vegetative growth","synonyms":[{"name":"decreased H4K20me3 during vegetative growth","type":"exact"},{"name":"decreased histone H4-K20 trimethylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H4K20 trimethylation during vegetative growth","type":"exact"},{"name":"decreased histone lysine H4-K20 trimethylation during vegetative growth","type":"exact"},{"name":"reduced histone H4-K20 trimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004224"}


id: PBO:0027878
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleosome_binding","termid":"PBO:0027878"}


id: PBO:0052402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, two Ig domains and long cytoplasmic tail 3","termid":"PBO:0052402"}


id: PBO:0042497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 17","termid":"PBO:0042497"}


id: MONDO:1012194
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"occipital dysplasia, non-human animal","termid":"MONDO:1011949"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occipital dysplasia, dog","secondary_identifiers":["OMIA:000732-9615"],"termid":"MONDO:1012194","xrefs":{"Monarch":{"xref_id":"1012194"}}}


id: PBO:0043474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNOT10 antisense RNA 1","termid":"PBO:0043474"}


id: PBO:0077548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 256 pseudogene 1","termid":"PBO:0077548"}


id: GO:1905743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mitochondrial calcium uptake that is involved in negative regulation of presynaptic cytosolic calcium concentration.","definition_xrefs":["PMID:26644474","GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium import into the mitochondrion","termid":"GO:0036444"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"part_of","term_name":"negative regulation of presynaptic cytosolic calcium concentration","termid":"GO:0099113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"calcium import into the mitochondrion involved in negative regulation of presynaptic cytosolic calcium concentration","synonyms":[{"name":"calcium ion transmembrane import into mitochondrion involved in negative regulation of presynaptic cytosolic calcium concentration","type":"exact"},{"name":"mitochondrial calcium uptake involved in negative regulation of presynaptic cytosolic calcium concentration","type":"exact"}],"termid":"GO:1905743"}


id: MOD:00210
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively monooxygenates an L-cysteine residue to L-cysteine sulfenic acid.","definition_xrefs":["PubMed:9214307","RESID:AA0205","PubMed:9586994","DeltaMass:41","PubMed:10964927","PubMed:2501303","PubMed:9587003","OMSSA:193","Unimod:35#C","PubMed:8756456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur oxygenated L-cysteine","termid":"MOD:00708"},{"relation_name":"is_a","term_name":"sulfur monooxygenated residue","termid":"MOD:01854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteine sulfenic acid","synonyms":[{"name":"(2R)-2-amino-3-(hydroxysulfanyl)propanoic acid","type":"exact"},{"name":"(2R)-2-amino-3-(oxido-lambda(4)-sulfanyl)propanoic acid [tautomer]","type":"exact"},{"name":"2-amino-2-carboxyethanesulfenic acid","type":"exact"},{"name":"2-amino-3-sulfinylpropanoic acid [tautomer]","type":"exact"},{"name":"3-sulfenoalanine","type":"exact"},{"name":"ACT_SITE Cysteine sulfenic acid (-SOH) intermediate","type":"exact"},{"name":"CysOH","type":"exact"},{"name":"L-cysteine sulfenic acid","type":"exact"},{"name":"MOD_RES Cysteine sulfenic acid (-SOH)","type":"exact"},{"name":"Oxidation","type":"related"},{"name":"S-hydroxycysteine","type":"exact"},{"name":"S-oxocysteine [tautomer]","type":"exact"},{"name":"S-oxycysteine [tautomer]","type":"exact"},{"name":"Sulfenic Acid (from Cysteine)","type":"exact"},{"name":"cysteine S-oxide [tautomer]","type":"exact"},{"name":"cysteine sulfoxide [tautomer]","type":"exact"},{"name":"cysteine sulphenic acid","type":"exact"},{"name":"mod193","type":"exact"}],"termid":"MOD:00210"}


id: MOD:02039
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen group with a amino group","direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminated residue","synonyms":[{"name":"AmRes","type":"exact"}],"termid":"MOD:02039"}


id: GO:0097126
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin B2 and cyclin-dependent kinase 1 (CDK1). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["GOC:so","PMID:15935619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cyclin B2-CDK1 complex","termid":"GO:0097126"}


id: GO:0071007
data:
  {"annotated_genes":["SJAG_00911","SJAG_04898","SJAG_04117","SJAG_00414","SJAG_00859"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96328,105894,106035,108252,116715],"is_not":false,"summary":null,"term":"GO:0071007"}]},"cv_name":"cellular_component","definition":"A spliceosomal complex that contains the U2, U5 and U6 snRNPs bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the U2, U5 and U6 snRNPs.","definition_xrefs":["ISBN:0879697393","PMID:18322460","PMID:19239890","GOC:krc","GOC:ab","GOC:mah","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U2-type spliceosomal complex","termid":"GO:0005684"},{"relation_name":"is_a","term_name":"catalytic step 2 spliceosome","termid":"GO:0071013"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00414":null,"SJAG_00859":null,"SJAG_00911":null,"SJAG_04117":null,"SJAG_04898":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"U2-type catalytic step 2 spliceosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GT-AG catalytic step 2 spliceosome","type":"narrow"},{"name":"major catalytic step 2 spliceosome","type":"exact"},{"name":"mammalian U2-type spliceosomal complex C","type":"narrow"},{"name":"mammalian U2-type spliceosomal complex C1","type":"narrow"},{"name":"yeast U2-type spliceosomal complex A2-2","type":"narrow"}],"termid":"GO:0071007","terms_by_termid":{"GO:0071007":null}}


id: PBO:0061776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otoconin 90","termid":"PBO:0061776"}


id: PBO:0059172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelin protein zero like 3","termid":"PBO:0059172"}


id: MONDO:0043985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation that includes the brain, spinal cord and surrounding tissues secondary to systemic lupus erythematosus (SLE); it is associated with neurological and/or psychiatric features.","definition_xrefs":["NCIT:C116919"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"central nervous system vasculitis","termid":"MONDO:0003346"},{"relation_name":"excluded_subClassOf","term_name":"meningoencephalitis","termid":"MONDO:0005845"},{"relation_name":"is_a","term_name":"autoimmune disorder of central nervous system","termid":"MONDO:0000568"},{"relation_name":"is_a","term_name":"systemic lupus erythematosus","termid":"MONDO:0007915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"central nervous system lupus","secondary_identifiers":["MEDGEN:156265","UMLS:C0752332","MESH:D020945"],"synonyms":[{"name":"CNS lupus","type":"exact"},{"name":"Meningoencephalitides, lupus","type":"related"},{"name":"central nervous system lupus","type":"exact"},{"name":"central nervous system lupus vasculitis","type":"related"},{"name":"central nervous system systemic lupus Erythematosis","type":"related"},{"name":"lupus Meningoencephalitides","type":"related"},{"name":"lupus meningoencephalitis","type":"related"},{"name":"meningoencephalitis, lupus","type":"related"},{"name":"neuropsychiatric systemic lupus erythematosus","type":"related"},{"name":"systemic lupus Erythematosis, central nervous system","type":"related"}],"termid":"MONDO:0043985","xrefs":{"Monarch":{"xref_id":"0043985"}}}


id: MONDO:0600016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lethal, developmental lung malformation resulting in neonatal respiratory insufficiency. It is characterized by pulmonary hypoplasia and arrest in the pseudoglandular stage of development, resulting in the absence of functional gas exchange. It can be caused by mutations in FGF10, FGFR2 or TBX4.","definition_xrefs":["PMID:31641660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acinar dysplasia","secondary_identifiers":["icd11.foundation:1890124170","UMLS:C3872820","MEDGEN:835348"],"synonyms":[{"name":"AcDys","type":"exact"}],"termid":"MONDO:0600016","xrefs":{"Monarch":{"xref_id":"0600016"}}}


id: PBO:0052063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine acetyltransferase 5","termid":"PBO:0052063"}


id: PBO:0029878
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_dimethylation_at_telomere","termid":"PBO:0029878"}


id: MONDO:0007654
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genu valgum, st. Helena familial","secondary_identifiers":["UMLS:C1842052","MESH:C537685","MEDGEN:333980","OMIM:137370"],"synonyms":[{"name":"St. Helena familial genu valgum","type":"related"},{"name":"genu valgum, hereditary pubertal","type":"related"},{"name":"genu valgum, st Helena familial","type":"related"},{"name":"genu valgum, st. Helena familial","type":"exact"},{"name":"hereditary pubertal genu valgum","type":"related"},{"name":"severe 'knock-knees' and variable lesser malalignment at the elbows and wrists","type":"related"}],"termid":"MONDO:0007654","xrefs":{"Monarch":{"xref_id":"0007654"}}}


id: GO:1903181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dopamine biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:PARL","GOC:bf","PMID:19703902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of dopamine metabolic process","termid":"GO:0045964"},{"relation_name":"is_a","term_name":"regulation of dopamine biosynthetic process","termid":"GO:1903179"},{"relation_name":"positively_regulates","term_name":"dopamine biosynthetic process","termid":"GO:0042416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dopamine biosynthetic process","synonyms":[{"name":"activation of dopamine anabolism","type":"narrow"},{"name":"activation of dopamine biosynthesis","type":"narrow"},{"name":"activation of dopamine biosynthetic process","type":"narrow"},{"name":"activation of dopamine formation","type":"narrow"},{"name":"activation of dopamine synthesis","type":"narrow"},{"name":"positive regulation of dopamine anabolism","type":"exact"},{"name":"positive regulation of dopamine biosynthesis","type":"exact"},{"name":"positive regulation of dopamine formation","type":"exact"},{"name":"positive regulation of dopamine synthesis","type":"exact"},{"name":"up regulation of dopamine anabolism","type":"exact"},{"name":"up regulation of dopamine biosynthesis","type":"exact"},{"name":"up regulation of dopamine biosynthetic process","type":"exact"},{"name":"up regulation of dopamine formation","type":"exact"},{"name":"up regulation of dopamine synthesis","type":"exact"},{"name":"up-regulation of dopamine anabolism","type":"exact"},{"name":"up-regulation of dopamine biosynthesis","type":"exact"},{"name":"up-regulation of dopamine biosynthetic process","type":"exact"},{"name":"up-regulation of dopamine formation","type":"exact"},{"name":"up-regulation of dopamine synthesis","type":"exact"},{"name":"upregulation of dopamine anabolism","type":"exact"},{"name":"upregulation of dopamine biosynthesis","type":"exact"},{"name":"upregulation of dopamine biosynthetic process","type":"exact"},{"name":"upregulation of dopamine formation","type":"exact"},{"name":"upregulation of dopamine synthesis","type":"exact"}],"termid":"GO:1903181"}


id: MONDO:0060582
data:
  {"annotated_genes":["SJAG_01063"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84710],"is_not":false,"summary":null,"term":"MONDO:0060582"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"mitochondrial disease","termid":"MONDO:0044970"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"auditory neuropathy-optic atrophy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:542585","UMLS:C4521678","MEDGEN:1623572","GARD:17983","OMIM:617717"],"synonyms":[{"name":"ANOA","type":"related"},{"name":"auditory neuropathy and optic atrophy","type":"related"}],"termid":"MONDO:0060582","terms_by_termid":{"MONDO:0060582":null},"xrefs":{"Monarch":{"xref_id":"0060582"}}}


id: SO:0001215
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of an exon that encodes for protein sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exon_region","termid":"SO:0000852"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding_region_of_exon","synonyms":[{"name":"coding region of exon","type":"exact"}],"termid":"SO:0001215"}


id: SO:0001359
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_carboxyhydroxymethyl_uridine_methyl_ester is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_carboxyhydroxymethyl_uridine_methyl_ester","secondary_identifiers":["RNAMOD:067"],"synonyms":[{"name":"5-(carboxyhydroxymethyl)uridine methyl ester","type":"exact"},{"name":"five carboxyhydroxymethyl uridine methyl ester","type":"exact"},{"name":"mchm5U","type":"exact"}],"termid":"SO:0001359"}


id: FYPO:0002105
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has a normal shape but is inviable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal vegetative cell shape","termid":"FYPO:0001125"},{"relation_name":"is_a","term_name":"normal vegetative cell shape","termid":"FYPO:0001125"},{"relation_name":"is_a","term_name":"inviable vegetative cell with normal cell morphology","termid":"FYPO:0002199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000004","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"inviable vegetative cell with normal cell shape","synonyms":[{"name":"inviable cell with normal cell shape during vegetative growth","type":"exact"},{"name":"inviable vegetative cell with normal cell shape during mitotic cell cycle","type":"related"},{"name":"lethal; vegetative cell with normal cell shape","type":"exact"}],"termid":"FYPO:0002105"}


id: PBO:0042435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 42","termid":"PBO:0042435"}


id: PBO:0090819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortical variant C2 domain protein, human FAM102A and FAM102B ortholog, implicated in signalling or endocytosis","termid":"PBO:0090819"}


id: GO:0032235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of calcium ions via a store-operated calcium channel.","definition_xrefs":["GOC:bf","PMID:16582901"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of calcium ion transport via store-operated calcium channel activity (obsolete GO:0032235)","synonyms":[{"name":"down regulation of calcium ion transport via store-operated calcium channel","type":"exact"},{"name":"down-regulation of calcium ion transport via store-operated calcium channel","type":"exact"},{"name":"downregulation of calcium ion transport via store-operated calcium channel","type":"exact"},{"name":"inhibition of calcium ion transport via store-operated calcium channel","type":"narrow"},{"name":"negative regulation of calcium ion transport via store-operated calcium channel activity","type":"exact"},{"name":"negative regulation of calcium transport via store-operated calcium channel","type":"exact"},{"name":"negative regulation of store-operated calcium channel activity","type":"exact"}],"termid":"GO:0032235"}


id: GO:0031503
data:
  {"annotated_genes":["SJAG_02624","SJAG_01805","SJAG_04148","SJAG_02210","SJAG_05196","SJAG_03683","SJAG_03882","SJAG_01745","SJAG_03126","SJAG_00794","SJAG_01391","SJAG_01013","SJAG_04308","SJAG_01449","SJAG_03299","SJAG_01756","SJAG_03540","SJAG_04379","SJAG_04076","SJAG_02274","SJAG_00471","SJAG_02737","SJAG_02250","SJAG_01613","SJAG_01338","SJAG_03729","SJAG_01065","SJAG_00727","SJAG_00178","SJAG_03593","SJAG_02761","SJAG_01358","SJAG_00753","SJAG_02814","SJAG_04721","SJAG_03719","SJAG_01339","SJAG_02757","SJAG_04940","SJAG_03012"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098653"},{"annotations":[102318,89069,90825,116437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072766"},{"annotations":[116684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990735"},{"annotations":[115421,118160,98722,94795,99878,117645,93279,108631,101939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990571"},{"annotations":[89256,102499,90564,99139,115725,105239,101374,117177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000055"},{"annotations":[102500,90565,99320,96563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000056"},{"annotations":[88485,93472,104878,95611,96556,100891,110934,91206,115661,105649,109922,102154,94464,103445,99910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000054"}]},"cv_name":"biological_process","definition":"A localization process that acts on a protein complex; the complex is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization","termid":"GO:0051179"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00178":null,"SJAG_00471":null,"SJAG_00727":null,"SJAG_00753":null,"SJAG_00794":null,"SJAG_01013":null,"SJAG_01065":null,"SJAG_01338":null,"SJAG_01339":null,"SJAG_01358":null,"SJAG_01391":null,"SJAG_01449":null,"SJAG_01613":null,"SJAG_01745":null,"SJAG_01756":null,"SJAG_01805":null,"SJAG_02210":null,"SJAG_02250":null,"SJAG_02274":null,"SJAG_02624":null,"SJAG_02737":null,"SJAG_02757":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_03012":null,"SJAG_03126":null,"SJAG_03299":null,"SJAG_03540":null,"SJAG_03593":null,"SJAG_03683":null,"SJAG_03719":null,"SJAG_03729":null,"SJAG_03882":null,"SJAG_04076":null,"SJAG_04148":null,"SJAG_04308":null,"SJAG_04379":null,"SJAG_04721":null,"SJAG_04940":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein-containing complex localization","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0034629"],"synonyms":[{"name":"cellular protein complex localisation","type":"related"},{"name":"cellular protein complex localization","type":"related"},{"name":"cellular protein-containing complex localization","type":"related"},{"name":"establishment and maintenance of cellular protein complex localization","type":"related"},{"name":"establishment and maintenance of protein complex localization","type":"exact"},{"name":"protein complex localisation","type":"exact"},{"name":"protein complex localization","type":"related"}],"termid":"GO:0031503","terms_by_termid":{"GO:0000054":null,"GO:0000055":null,"GO:0000056":null,"GO:0072766":null,"GO:0098653":null,"GO:1990571":null,"GO:1990735":null}}


id: GO:0150144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of CD80 biosynthetic process.","definition_xrefs":["GOC:aruk","PMID:26936882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glycoprotein biosynthetic process","termid":"GO:0010561"},{"relation_name":"is_a","term_name":"regulation of CD80 production","termid":"GO:0150143"},{"relation_name":"negatively_regulates","term_name":"CD80 biosynthetic process","termid":"GO:0035780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of CD80 production","synonyms":[{"name":"negative regulation of CD80 biosynthetic process","type":"exact"}],"termid":"GO:0150144"}


id: PBO:0053000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit beta 4","termid":"PBO:0053000"}


id: PBO:0027080
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_during_glucose_starvation","termid":"PBO:0027080"}


id: PBO:0038486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABCB10 pseudogene 1","termid":"PBO:0038486"}


id: SO:0000367
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region within an integron, adjacent to an integrase, at which site specific recombination involving an attC_site takes place.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integration_excision_site","termid":"SO:0000946"},{"relation_name":"part_of","term_name":"integron","termid":"SO:0000365"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attI_site","synonyms":[{"name":"attI site","type":"exact"}],"termid":"SO:0000367"}


id: GO:0005254
data:
  {"annotated_genes":["SJAG_01168"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111156],"is_not":false,"summary":null,"term":"GO:0005254"}]},"cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of a chloride ion through a transmembrane aqueous pore or channel.","definition_xrefs":["GOC:mtg_transport","GOC:pr","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion channel activity","termid":"GO:0005253"},{"relation_name":"is_a","term_name":"chloride transmembrane transporter activity","termid":"GO:0015108"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01168":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"chloride channel activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9712204","Reactome:R-HSA-2684901","Reactome:R-HSA-2744242","Reactome:R-HSA-2744361","Reactome:R-HSA-2744349","Reactome:R-HSA-975449","Reactome:R-HSA-975340","Reactome:R-HSA-427570","Reactome:R-HSA-9659568"],"termid":"GO:0005254","terms_by_termid":{"GO:0005254":null}}


id: PBO:0108506
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eco_evidence","termid":"PBO:0108506"}


id: MONDO:0021499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the cerebellum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar neoplasm","termid":"MONDO:0002913"},{"relation_name":"is_a","term_name":"benign neoplasm of brain","termid":"MONDO:0021451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of cerebellum","secondary_identifiers":["UMLS:C0750995","icd11.foundation:664460646","SCTID:92050000","MEDGEN:196704","NCIT:C4955"],"synonyms":[{"name":"benign cerebellar neoplasm","type":"exact"},{"name":"benign cerebellar neoplasms","type":"exact"},{"name":"benign cerebellar tumor","type":"exact"},{"name":"benign cerebellar tumour","type":"exact"},{"name":"benign neoplasm of the cerebellum","type":"exact"},{"name":"benign tumor of cerebellum","type":"exact"},{"name":"benign tumor of the cerebellum","type":"exact"},{"name":"benign tumour of cerebellum","type":"exact"},{"name":"benign tumour of the cerebellum","type":"exact"},{"name":"cerebellar neoplasms, benign","type":"exact"},{"name":"cerebellum benign neoplasm","type":"exact"},{"name":"neoplasms, benign, cerebellar","type":"exact"},{"name":"neoplasms, cerebellar, benign","type":"exact"}],"termid":"MONDO:0021499","xrefs":{"Monarch":{"xref_id":"0021499"}}}


id: MONDO:0008042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myoclonus and ataxia (obsolete MONDO:0008042)","termid":"MONDO:0008042","xrefs":{"Monarch":{"xref_id":"0008042"}}}


id: GO:0047556
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dihydroxyphthalate + H+ = 3,4-dihydroxybenzoate + CO2.","definition_xrefs":["EC:4.1.1.69","RHEA:18601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3,4-dihydroxyphthalate decarboxylase activity","secondary_identifiers":["MetaCyc:34-DIHYDROXYPHTHALATE-DECARBOXYLASE-RXN","GO:0034913","KEGG_REACTION:R01634","UM-BBD_reactionID:r1447"],"synonyms":[{"name":"3,4-dihydroxyphthalate 2-decarboxylase activity","type":"exact"},{"name":"3,4-dihydroxyphthalate carboxy-lyase (3,4-dihydroxybenzoate-forming)","type":"related"},{"name":"3,4-dihydroxyphthalate carboxy-lyase activity","type":"related"}],"termid":"GO:0047556"}


id: PBO:0072481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 10","termid":"PBO:0072481"}


id: GO:1902622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neutrophil migration.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:1826836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte migration","termid":"GO:0002685"},{"relation_name":"regulates","term_name":"neutrophil migration","termid":"GO:1990266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neutrophil migration","termid":"GO:1902622"}


id: MONDO:0033492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Coffin-Siris syndrome in which the cause of the disease is a mutation in the ARID2 gene.","definition_xrefs":["MONDO:patterns/OMIM_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"BAFopathy","termid":"MONDO:0700120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Coffin-Siris syndrome 6","secondary_identifiers":["DOID:0080297","OMIM:617808","GARD:16254","MEDGEN:1615540","UMLS:C4540499"],"synonyms":[{"name":"ARID2-related BAFopathy","type":"exact"},{"name":"COFFIN-SIRIS syndrome 6","type":"related"},{"name":"CSS6","type":"related"},{"name":"Coffin-Siris syndrome 6","type":"exact"}],"termid":"MONDO:0033492","xrefs":{"Monarch":{"xref_id":"0033492"}}}


id: PBO:0043674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronin 1B","termid":"PBO:0043674"}


id: MONDO:0018099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Whipple disease (obsolete MONDO:0018099)","termid":"MONDO:0018099","xrefs":{"Monarch":{"xref_id":"0018099"}}}


id: GO:0042221
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id: FYPO:0000151
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id: MONDO:0001463
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id: PBO:0034196
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id: PBO:0050554
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id: MONDO:0015010
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id: MONDO:0020158
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id: MONDO:0800355
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id: GO:0003322
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id: PBO:0054489
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id: FYPO:0004810
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id: PBO:0090497
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id: PBO:0041113
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id: PBO:0050512
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id: GO:0052211
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id: MONDO:0008872
data:
  {"annotated_genes":["SJAG_02246"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86737],"is_not":false,"summary":null,"term":"MONDO:0008872"}]},"cv_name":"mondo","definition":"A form of microcephalic primordial dwarfism (MPD) characterized by severe pre- and postnatal growth retardation, with marked microcephaly in proportion to body size, skeletal dysplasia, abnormal dentition, insulin resistance, and increased risk for cerebrovascular disease.","definition_xrefs":["Orphanet:2637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microcephalic osteodysplastic primordial dwarfism","termid":"MONDO:0000060"},{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"},{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02246":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005497"],"is_obsolete":false,"name":"microcephalic osteodysplastic primordial dwarfism type II","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:9844","MEDGEN:96587","DOID:0060609","MESH:C565898","OMIM:210720","SCTID:254103003","UMLS:C0432246"],"synonyms":[{"name":"MOPD II","type":"related"},{"name":"MOPD type II","type":"exact"},{"name":"MOPD2","type":"related"},{"name":"Majewski osteodysplastic primordial dwarfism type II","type":"exact"},{"name":"Mopd 2","type":"related"},{"name":"microcephalic osteodysplastic primordial dwarfism type 2","type":"related"},{"name":"microcephalic osteodysplastic primordial dwarfism with tooth abnormalities","type":"related"},{"name":"microcephalic osteodysplastic primordial dwarfism, type 2","type":"related"},{"name":"microcephalic osteodysplastic primordial dwarfism, type II","type":"related"},{"name":"osteodysplastic primordial dwarfism type 2","type":"related"},{"name":"osteodysplastic primordial dwarfism type II","type":"exact"},{"name":"osteodysplastic primordial dwarfism, type 2","type":"related"}],"termid":"MONDO:0008872","terms_by_termid":{"MONDO:0008872":null},"xrefs":{"Monarch":{"xref_id":"0008872"}}}


id: PBO:0056803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 1 pseudogene 1","termid":"PBO:0056803"}


id: PBO:0065731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain containing 3A, DNA repair factor","termid":"PBO:0065731"}


id: PR:Q10250
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A disco-interacting protein 2 homolog B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C56F8.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.02","secondary_identifiers":["UniProtKB:Q10250"],"synonyms":[{"name":"Spom972h-DIP2B","type":"exact"}],"termid":"PR:Q10250"}


id: MONDO:0011642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease arising from a defect of carnitine acetyltransferase causing disruption of whole-body glucose homeostasis and muscle-specific loss of function results in reduced metabolic control, which resembles the insulin resistant state.","definition_xrefs":["PMID:28955988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnitine acetyltransferase deficiency","secondary_identifiers":["GTR:AN0098794","MESH:C563249","UMLS:C1443228","ICD9:277.6","OMIM:606175","SCTID:124257002","GTR:AN0098795","MEDGEN:257042"],"synonyms":[{"name":"Acetyl-carnitine deficiency","type":"related"},{"name":"CrAT","type":"related"},{"name":"acetyl-carnitine deficiency","type":"related"},{"name":"carnitine acetyltransferase deficiency","type":"exact"}],"termid":"MONDO:0011642","xrefs":{"Monarch":{"xref_id":"0011642"}}}


id: GO:0045976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of progression through the embryonic mitotic cell cycle.","definition_xrefs":["GOC:go_curators","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle, embryonic","termid":"GO:0009794"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle","termid":"GO:0045930"},{"relation_name":"negatively_regulates","term_name":"mitotic cell cycle, embryonic","termid":"GO:0045448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of mitotic cell cycle, embryonic","synonyms":[{"name":"down regulation of progression through embryonic mitotic cell cycle","type":"exact"},{"name":"down-regulation of progression through embryonic mitotic cell cycle","type":"exact"},{"name":"downregulation of progression through embryonic mitotic cell cycle","type":"exact"},{"name":"inhibition of progression through embryonic mitotic cell cycle","type":"narrow"},{"name":"negative regulation of embryonic mitotic cell cycle","type":"exact"},{"name":"negative regulation of embryonic mitotic cell cycle progression","type":"exact"},{"name":"negative regulation of progression through embryonic mitotic cell cycle","type":"exact"}],"termid":"GO:0045976"}


id: PBO:0087604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the CCR4-NOT transcriptional regulatory complex; CCR4-NOT complex is evolutionarily-conserved and involved in controlling mRNA initiation, elongation, and degradation","termid":"PBO:0087604"}


id: MONDO:0002846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gastritis that is associated with the presence of granulomas.","definition_xrefs":["NCIT:C27348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastritis","termid":"MONDO:0004966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"granulomatous gastritis","secondary_identifiers":["UMLS:C1112577","DOID:4038","MEDGEN:207272"],"synonyms":[{"name":"granulomatous gastritis","type":"exact"}],"termid":"MONDO:0002846","xrefs":{"Monarch":{"xref_id":"0002846"}}}


id: GO:0047455
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 16-alpha-hydroxyprogesterone = H2O + 16-dehydroprogesterone.","definition_xrefs":["MetaCyc:4.2.1.98-RXN","EC:4.2.1.98"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"16-alpha-hydroxyprogesterone dehydratase activity","secondary_identifiers":["RHEA:12584","GO:0047523"],"synonyms":[{"name":"16-alpha-dehydroxylase activity","type":"related"},{"name":"16-alpha-hydroxyprogesterone dehydroxylase activity","type":"related"},{"name":"16-dehydroprogesterone hydratase activity","type":"related"},{"name":"16alpha-dehydroxylase activity","type":"related"},{"name":"16alpha-hydroxyprogesterone dehydratase activity","type":"related"},{"name":"16alpha-hydroxyprogesterone dehydroxylase activity","type":"related"},{"name":"16alpha-hydroxyprogesterone hydro-lyase (16,17-didehydroprogesterone-forming)","type":"related"},{"name":"16alpha-hydroxyprogesterone hydro-lyase activity","type":"related"},{"name":"hydroxyprogesterone dehydroxylase activity","type":"exact"}],"termid":"GO:0047455"}


id: GO:0051787
data:
  {"annotated_genes":["SJAG_00354"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76666],"is_not":false,"summary":null,"term":"GO:0051787"}]},"cv_name":"molecular_function","definition":"Binding to a misfolded protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00354":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"misfolded protein binding","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-5324632"],"termid":"GO:0051787","terms_by_termid":{"GO:0051787":null}}


id: PBO:0001167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex ERCC-3 subunit","termid":"PBO:0001167"}


id: MONDO:0001913
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Decreased number of spermatozoa in the semen.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male infertility","termid":"MONDO:0005372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"oligospermia","secondary_identifiers":["DOID:14228","icd11.foundation:1497721709","ICD9:606.1","HP:0000798","UMLS:C0028960","MEDGEN:18162","MESH:D009845"],"termid":"MONDO:0001913","xrefs":{"Monarch":{"xref_id":"0001913"}}}


id: GO:0016169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to bacteriochlorophyll c, a chlorophyll of photosynthetic bacteria, for example green sulfur bacteria.","definition_xrefs":["ISBN:0192800981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacteriochlorophyll binding","termid":"GO:0042314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"bacteriochlorophyll c binding","termid":"GO:0016169"}


id: PBO:0054616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2021","termid":"PBO:0054616"}


id: MONDO:0017257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic posterior uveitis is a rare, potentially sight-threatening, ocular disease, not attributed to any specific ocular or systemic cause, characterized by focal, multifocal or diffuse non-infectious inflammation in the posterior uvea (i.e. choroiditis, chorioretinitis, retinitis and neuroretinitis). Visual morbidity due to complications (including cystoid macular edema and choroidal neovascularization) has been reported.","definition_xrefs":["Orphanet:280917"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"choroiditis","termid":"MONDO:0001280"},{"relation_name":"is_a","term_name":"uveitis","termid":"MONDO:0020283"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"idiopathic posterior uveitis","secondary_identifiers":["GARD:21099","MEDGEN:1657160","UMLS:C4751435"],"termid":"MONDO:0017257","xrefs":{"Monarch":{"xref_id":"0017257"}}}


id: PR:Q9HDV5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrp7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDV5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L27, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP19A11.05c","synonyms":[{"name":"Spom972h-mrp7","type":"exact"}],"termid":"PR:Q9HDV5"}


id: GO:0033442
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AAC codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0060090","GO:0005488"],"is_obsolete":false,"name":"AAC codon-amino acid adaptor activity","synonyms":[{"name":"asparagine tRNA","type":"related"}],"termid":"GO:0033442"}


id: MONDO:0957921
data:
  {"annotated_genes":["SJAG_02701"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85740],"is_not":false,"summary":null,"term":"MONDO:0957921"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Cornelia de Lange syndrome","termid":"MONDO:0016033"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02701":null},"genotype_count":0,"is_obsolete":false,"name":"Cornelia de Lange syndrome 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1848930","OMIM:620568","UMLS:C5882712","DOID:0060970"],"termid":"MONDO:0957921","terms_by_termid":{"MONDO:0957921":null},"xrefs":{"Monarch":{"xref_id":"0957921"}}}


id: PBO:0076904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEX101 pseudogene 1","termid":"PBO:0076904"}


id: PBO:0083079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Diphthamide synthetase; catalyzes the last amidation step of diphthamide biosynthesis using ammonium and ATP; evolutionarily conserved in eukaryotes; dph6 mutants exhibit diphthine accumulation and resistance to sordarin, which is indicative of defects in diphthamide formation on EF2; green fluorescent protein (GFP)-tagged protein localizes to the cytoplasm; DPH6/YLR143W is not an essential gene","termid":"PBO:0083079"}


id: PBO:0086618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery","termid":"PBO:0086618"}


id: MONDO:0005558
data:
  {"annotated_genes":["SJAG_00377","SJAG_02690","SJAG_04950","SJAG_03051","SJAG_02294","SJAG_02339","SJAG_04738","SJAG_04703","SJAG_03720","SJAG_04114","SJAG_04148","SJAG_03418","SJAG_02954","SJAG_00103","SJAG_03698"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008840"},{"annotations":[85451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009258"},{"annotations":[86440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030736"},{"annotations":[85126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013689"},{"annotations":[85885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054850"},{"annotations":[86686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013972"},{"annotations":[85496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014126"},{"annotations":[85112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014843"},{"annotations":[85903,85902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054862"},{"annotations":[85197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030870"},{"annotations":[85599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958035"},{"annotations":[86494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010350"},{"annotations":[86087,86088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014321"}]},"cv_name":"mondo","definition":"A disease involving the ovary.","direct_ancestors":[{"relation_name":"is_a","term_name":"gonadal disorder","termid":"MONDO:0002259"},{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00103":null,"SJAG_00377":null,"SJAG_02294":null,"SJAG_02339":null,"SJAG_02690":null,"SJAG_02954":null,"SJAG_03051":null,"SJAG_03418":null,"SJAG_03698":null,"SJAG_03720":null,"SJAG_04114":null,"SJAG_04148":null,"SJAG_04703":null,"SJAG_04738":null,"SJAG_04950":null},"genotype_count":0,"is_obsolete":false,"name":"ovarian disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4021818","DOID:1100","EFO:0005771","MEDGEN:892314","NCIT:C26841","MESH:D010049","SCTID:5552004"],"synonyms":[{"name":"disease of ovary","type":"exact"},{"name":"disease or disorder of ovary","type":"exact"},{"name":"disorder of ovary","type":"exact"},{"name":"ovarian disease","type":"exact"},{"name":"ovarian disorder","type":"exact"},{"name":"ovary disease","type":"exact"},{"name":"ovary disease or disorder","type":"exact"}],"termid":"MONDO:0005558","terms_by_termid":{"MONDO:0008840":null,"MONDO:0009258":null,"MONDO:0010350":null,"MONDO:0013689":null,"MONDO:0013972":null,"MONDO:0014126":null,"MONDO:0014321":null,"MONDO:0014843":null,"MONDO:0030736":null,"MONDO:0030870":null,"MONDO:0054850":null,"MONDO:0054862":null,"MONDO:0958035":null},"xrefs":{"Monarch":{"xref_id":"0005558"}}}


id: GO:0009502
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A series of membrane-linked oxidation-reduction reactions in which electrons are transferred from an initial electron donor through a series of intermediates to a final electron acceptor (usually oxygen).","definition_xrefs":["GOC:mtg_electron_transport","ISBN:0140514031"],"gene_count":0,"genotype_count":0,"name":"obsolete photosynthetic electron transport chain (obsolete GO:0009502)","synonyms":[{"name":"photosynthetic electron transport chain","type":"exact"}],"termid":"GO:0009502"}


id: PBO:0052899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 10-10","termid":"PBO:0052899"}


id: PBO:0056740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"METAP2 pseudogene 1","termid":"PBO:0056740"}


id: PBO:0002278
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.61","termid":"PBO:0002278"}


id: SOFP:aminoacid
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"amino acid coded for by a tRNA transcript feature","definition_xrefs":["so:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminoacid","termid":"SOFP:aminoacid"}


id: MONDO:0018274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"GM3 synthase deficiency is characterized by recurrent seizures (epilepsy) and problems with brain development. Within the first few weeks after birth, affected infants become irritable and develop feeding difficulties and vomiting that prevent them from growing and gaining weight at the usual rate. Seizures begin within the first year of life and worsen over time. Multiple types of seizures are possible, including generalized tonic-clonic seizures (also known as grand mal seizures), which cause muscle rigidity, convulsions, and loss of consciousness. Some affected children also experience prolonged episodes of seizure activity called nonconvulsive status epilepticus. The seizures associated with GM3 synthase deficiency tend to be resistant (refractory) to treatment with antiseizure medications.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"excluded_subClassOf","term_name":"skin pigmentation disorder","termid":"MONDO:0019288"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inborn disorder of glycosphingolipid and glycosylphosphatidylinositol anchor glycosylation","termid":"MONDO:0017748"},{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0024322","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"GM3 synthase deficiency","secondary_identifiers":["Orphanet:171714","Orphanet:370933","OMIM:609056","Orphanet:370938","DOID:0060470","GARD:12059","SCTID:722762005","MEDGEN:323005","UMLS:C1836824"],"synonyms":[{"name":"Amish infantile epilepsy syndrome","type":"exact"},{"name":"GM3 synthase deficiency","type":"exact"},{"name":"SPDRS","type":"exact"},{"name":"ST3GAL5-CDG","type":"exact"},{"name":"disorder of lactosylceramide alpha-2,3-sialyltransferase activity","type":"exact"},{"name":"epilepsy syndrome, infantile-onset symptomatic","type":"exact"},{"name":"infantile-onset symptomatic epilepsy syndrome - developmental stagnation - blindness","type":"exact"},{"name":"infantile-onset symptomatic epilepsy syndrome-developmental stagnation-blindness syndrome","type":"exact"},{"name":"lactosylceramide alpha-2,3-sialyltransferase activity disease","type":"exact"},{"name":"salt & pepper syndrome","type":"exact"},{"name":"salt and pepper developmental regression syndrome","type":"exact"},{"name":"salt and pepper mental retardation syndrome","type":"related"},{"name":"salt-and-pepper syndrome","type":"exact"}],"termid":"MONDO:0018274","xrefs":{"Monarch":{"xref_id":"0018274"}}}


id: MONDO:0020566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Klatskin tumor (obsolete MONDO:0020566)","termid":"MONDO:0020566","xrefs":{"Monarch":{"xref_id":"0020566"}}}


id: PBO:0001642
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative splicing possible. Evidence of transcript missing final intron","termid":"PBO:0001642"}


id: GO:0006400
data:
  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id: MONDO:0060664
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id: PBO:0071147
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 11","termid":"PBO:0071147"}


id: GO:0031406
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  {"annotated_genes":["SJAG_03861"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016594"}]},"cv_name":"molecular_function","definition":"Binding to a carboxylic acid, an organic acid containing one or more carboxyl (COOH) groups or anions (COO-).","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"organic acid binding","termid":"GO:0043177"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03861":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"carboxylic acid binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031406","terms_by_termid":{"GO:0016594":null}}


id: PBO:0045669
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein cytoplasmic 1 heavy chain 1","termid":"PBO:0045669"}


id: GO:0015783
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id: GO:1900734
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id: PBO:0114640
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, sulfur depletion response, Sdr1","termid":"PBO:0114640"}


id: GO:0022867
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables transfer of two electrons across a membrane.","definition_xrefs":["ISBN:0815340729","TC:5.A","GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete transmembrane 2-electron transfer carrier (obsolete GO:0022867)","synonyms":[{"name":"transmembrane two-electron transfer carrier","type":"exact"}],"termid":"GO:0022867"}


id: PBO:0031712
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_transport","termid":"PBO:0031712"}


id: PBO:0030917
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vegetative_cell_morphology","termid":"PBO:0030917"}


id: GO:0047834
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a D-threo-aldose + NAD+ = a D-threo-aldono-1,5-lactone + NADH.","definition_xrefs":["MetaCyc:D-THREO-ALDOSE-1-DEHYDROGENASE-RXN","EC:1.1.1.122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"D-threo-aldose 1-dehydrogenase activity","secondary_identifiers":["RHEA:19645"],"synonyms":[{"name":"(2S,3R)-aldose dehydrogenase activity","type":"related"},{"name":"D-threo-aldose:NAD+ 1-oxidoreductase activity","type":"related"},{"name":"L-fucose (D-arabinose) dehydrogenase activity","type":"related"},{"name":"L-fucose dehydrogenase activity","type":"related"},{"name":"dehydrogenase, L-fucose","type":"related"}],"termid":"GO:0047834"}


id: PBO:0069601
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 878, pseudogene","termid":"PBO:0069601"}


id: MONDO:0002459
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id: GO:0048045
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: all-trans-pentaprenyl diphosphate + isopentenyl diphosphate = all-trans-hexaprenyl diphosphate + diphosphate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-pentaprenyltranstransferase activity (obsolete GO:0048045)","synonyms":[{"name":"all-trans-hexaprenyl-diphosphate synthase activity","type":"related"},{"name":"all-trans-pentaprenyl-diphosphate:isopentenyl-diphosphate pentaprenyltranstransferase activity","type":"related"},{"name":"hexaprenyl diphosphate synthase activity","type":"related"},{"name":"hexaprenyl pyrophosphate synthetase activity","type":"exact"}],"termid":"GO:0048045"}


id: MONDO:0027353
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dyskeratosis congenita that has material basis in an autosomal recessive mutation of TERT on chromosome 5p15.33.","definition_xrefs":["DOID:0070021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dyskeratosis congenita","termid":"MONDO:0015780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"autosomal recessive dyskeratosis congenita 4","secondary_identifiers":["MEDGEN:462794","UMLS:C3151444"],"synonyms":[{"name":"DKCB4","type":"exact"},{"name":"dyskeratosis congenita, autosomal recessive 4","type":"exact"}],"termid":"MONDO:0027353","xrefs":{"Monarch":{"xref_id":"0027353"}}}


id: MONDO:0054697
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 11b with atopic dermatitis","secondary_identifiers":["MEDGEN:1627819","OMIM:617638","NCIT:C176630","DOID:0111958","UMLS:C4539957"],"synonyms":[{"name":"IMD11B","type":"related"},{"name":"atopic dermatitis, elevated IgE, and eosinophilia","type":"related"},{"name":"immunodeficiency 11B with ATOPIC dermatitis","type":"related"}],"termid":"MONDO:0054697","xrefs":{"Monarch":{"xref_id":"0054697"}}}


id: GO:0097671
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is YDR131C in S. cerevisiae.","definition_xrefs":["PMID:14747994","GOC:jd","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SCF-YDR131C ubiquitin ligase complex","termid":"GO:0097671"}


id: PBO:0054888
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2302","termid":"PBO:0054888"}


id: PBO:0068548
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 154, pseudogene","termid":"PBO:0068548"}


id: MONDO:0019953
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cystic malformation of the posterior fossa","termid":"MONDO:0020134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"mega-cisterna magna","secondary_identifiers":["Orphanet:97252","GARD:19355","UMLS:C1853377","MEDGEN:344031"],"termid":"MONDO:0019953","xrefs":{"Monarch":{"xref_id":"0019953"}}}


id: PBO:0075772
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 3","termid":"PBO:0075772"}


id: GO:0018901
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2,4-dichlorophenoxyacetic acid, a chlorinated phenoxy compound which functions as a systemic herbicide and is used to control many types of broadleaf weeds.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"2,4-dichlorophenoxyacetic acid metabolic process","synonyms":[{"name":"2,4-D metabolic process","type":"exact"},{"name":"2,4-D metabolism","type":"exact"},{"name":"2,4-dichlorophenoxyacetic acid metabolism","type":"exact"}],"termid":"GO:0018901"}


id: FYECO:0000155
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which choline was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ choline","termid":"FYECO:0000155"}


id: PR:Q09700
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gep3 gene.","definition_xrefs":["UniProtKB:Q09700","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2F7.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F7.09c","synonyms":[{"name":"Spom972h-gep3","type":"exact"}],"termid":"PR:Q09700"}


id: PBO:0113427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine kinase that controls cell cycle progression; represses rDNA transcription and promotes 20S pre-rRNA maturation; catalytic activity regulates its association with pre-40S particles where it prevents premature entry into translation; downregulates centromeric RNA levels, limits RNAPII accessibility, stimulates cenRNA degradation and promotes timely kinetochore assembly; autophosphorylates and phosphorylates Rpa43p in anaphase to remove Pol I from rDNA","termid":"PBO:0113427"}


id: PBO:0072965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1A member 1","termid":"PBO:0072965"}


id: PR:Q10178-2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U2 snRNP component prp10 (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:Q10178-2.","definition_xrefs":["UniProtKB:Q10178","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U2 snRNP component prp10 (Schizosaccharomyces pombe 972h-)","termid":"PR:Q10178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP component prp10 isoform B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","secondary_identifiers":["UniProtKB:Q10178-2"],"synonyms":[{"name":"Spom972h-SF3B1/iso:B","type":"exact"}],"termid":"PR:Q10178-2"}


id: GO:1900271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of long-term synaptic potentiation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic plasticity","termid":"GO:0048167"},{"relation_name":"regulates","term_name":"long-term synaptic potentiation","termid":"GO:0060291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of long-term synaptic potentiation","synonyms":[{"name":"regulation of LTP","type":"related"},{"name":"regulation of long-term potentiation","type":"broad"}],"termid":"GO:1900271"}


id: FYPO:0007109
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which centromere clustering is normal (i.e. indistinguishable from wild type during meiotic prometaphase I.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiotic centromere clustering during meiotic prometaphase I","synonyms":[{"name":"normal centromere clustering during meiotic prometaphase I","type":"exact"},{"name":"normal chromosome retrieval during meiotic prometaphase I","type":"related"},{"name":"normal kinetochore retrieval during meiotic prometaphase I","type":"related"},{"name":"normal meiotic centromere clustering during prometaphase I","type":"exact"}],"termid":"FYPO:0007109"}


id: GO:0002554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of serotonin by a platelet or group of platelets.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serotonin secretion involved in inflammatory response","termid":"GO:0002442"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"platelet degranulation","termid":"GO:0002576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0023052","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"serotonin secretion by platelet","synonyms":[{"name":"serotonin release by platelet","type":"related"}],"termid":"GO:0002554"}


id: GO:0007516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the hemocyte over time, from its formation to the mature structure. Hemocytes are blood cells associated with a hemocoel (the cavity containing most of the major organs of the arthropod body) which are involved in defense and clotting of hemolymph, but not involved in transport of oxygen.","definition_xrefs":["GOC:mtg_sensu","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemopoiesis","termid":"GO:0030097"},{"relation_name":"part_of","term_name":"hemocyte differentiation","termid":"GO:0042386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hemocyte development","synonyms":[{"name":"arthropod blood cell development","type":"exact"}],"termid":"GO:0007516"}


id: PBO:0088593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and cytoplasmic arginine-tRNA ligase Rrs1/Mrs1","termid":"PBO:0088593"}


id: FYPO:0005185
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that contains one or more septa, has condensed chromatin, and undergoes two or more rounds of cell division, and then dies.","definition_xrefs":["PomBase:al","PMID:8557037","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions","termid":"FYPO:0002430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, septated cell with condensed chromatin","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, septated cell with condensed chromatin","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, septated cell with condensed chromatin","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, septated cell with condensed chromatin","type":"exact"}],"termid":"FYPO:0005185"}


id: PBO:0060039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 27","termid":"PBO:0060039"}


id: PBO:0074459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin phosphodiesterase 4","termid":"PBO:0074459"}


id: PBO:0075350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sosondowah ankyrin repeat domain family member A","termid":"PBO:0075350"}


id: PBO:0082987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic asparaginyl-tRNA synthetase; required for protein synthesis, catalyzes the specific attachment of asparagine to its cognate tRNA","termid":"PBO:0082987"}


id: PBO:0060444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD kinase","termid":"PBO:0060444"}


id: PBO:0007592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense RNA Mue16","termid":"PBO:0007592"}


id: PATO:0001687
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's vertical distance of a point above or below a reference surface.","definition_xrefs":["Trailillustrated:Trailillustrated"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elevation","termid":"PATO:0001687"}


id: GO:0032731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-1 beta production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of interleukin-1 beta production","termid":"GO:0032651"},{"relation_name":"is_a","term_name":"positive regulation of interleukin-1 production","termid":"GO:0032732"},{"relation_name":"positively_regulates","term_name":"interleukin-1 beta production","termid":"GO:0032611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-1 beta production","secondary_identifiers":["GO:0050725","GO:0050718"],"synonyms":[{"name":"activation of interleukin-1 beta production","type":"narrow"},{"name":"positive regulation of IL-1 beta production","type":"exact"},{"name":"positive regulation of interleukin-1 beta biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-1 beta secretion","type":"narrow"},{"name":"stimulation of interleukin-1 beta production","type":"narrow"},{"name":"up regulation of interleukin-1 beta production","type":"exact"},{"name":"up-regulation of interleukin-1 beta production","type":"exact"},{"name":"upregulation of interleukin-1 beta production","type":"exact"}],"termid":"GO:0032731"}


id: PBO:0052551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell lectin like receptor C4","termid":"PBO:0052551"}


id: MONDO:0022761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"chromosome 3 disorder","termid":"MONDO:0700010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 duplication syndrome","secondary_identifiers":["UMLS:C2931333","MEDGEN:419778","MESH:C536803"],"termid":"MONDO:0022761","xrefs":{"Monarch":{"xref_id":"0022761"}}}


id: GO:0060345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of creating a trabecula in the spleen. A trabecula is a tissue element in the form of a small beam, strut or rod.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trabecula formation","termid":"GO:0060343"},{"relation_name":"part_of","term_name":"spleen development","termid":"GO:0048536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spleen trabecula formation","synonyms":[{"name":"spleen trabecula biogenesis","type":"related"},{"name":"spleen trabeculation","type":"exact"}],"termid":"GO:0060345"}


id: PBO:0085500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein arginine N-methyltransferase; exhibits septin and Hsl1p-dependent localization to the bud neck in budded cells and periodic Hsl1p-dependent phosphorylation; required with Hsl1p, and Elm1p for the mother-bud neck recruitment, phosphorylation, and degradation of Swe1p; responsible for symmetric dimethylation of histone H4 on Arg3; relocalizes away from bud neck upon DNA replication stress; human homolog PRMT5 can complement yeast hsl7 mutant","termid":"PBO:0085500"}


id: PBO:0061423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD(P)H quinone dehydrogenase 1","termid":"PBO:0061423"}


id: MONDO:0002720
data:
  {"annotated_genes":["SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm that occurs in sella turcica. Representative examples include craniopharyngioma and pituitary gland adenoma.","definition_xrefs":["NCIT:C4944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skull base neoplasm","termid":"MONDO:0002785"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03429":null},"genotype_count":0,"is_obsolete":false,"name":"sella turcica neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:148188","ONCOTREE:SELT","DOID:3643","UMLS:C0748616"],"synonyms":[{"name":"neoplasm of sella turcica","type":"exact"},{"name":"neoplasm of the sella turcica","type":"exact"},{"name":"sella turcica neoplasm","type":"exact"},{"name":"sella turcica tumor","type":"exact"},{"name":"sella turcica tumour","type":"exact"},{"name":"sellar neoplasm","type":"exact"},{"name":"sellar tumor","type":"exact"},{"name":"sellar tumour","type":"exact"},{"name":"selt","type":"related"},{"name":"tumor of sella turcica","type":"exact"},{"name":"tumor of the sella turcica","type":"exact"},{"name":"tumour of sella turcica","type":"exact"},{"name":"tumour of the sella turcica","type":"exact"}],"termid":"MONDO:0002720","terms_by_termid":{"MONDO:0009050":null},"xrefs":{"Monarch":{"xref_id":"0002720"}}}


id: GO:1900791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving shamixanthone.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"shamixanthone metabolic process","synonyms":[{"name":"shamixanthone metabolism","type":"exact"}],"termid":"GO:1900791"}


id: GO:1903939
data:
  {"annotated_genes":["SJAG_00143","SJAG_06588","SJAG_05030","SJAG_04206"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903940"},{"annotations":[90678,106483,97237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904515"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of TORC2 signaling.","definition_xrefs":["PMID:24247430","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of TOR signaling","termid":"GO:0032006"},{"relation_name":"regulates","term_name":"TORC2 signaling","termid":"GO:0038203"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00143":null,"SJAG_04206":null,"SJAG_05030":null,"SJAG_06588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of TORC2 signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of TORC2 signal transduction","type":"exact"}],"termid":"GO:1903939","terms_by_termid":{"GO:1903940":null,"GO:1904515":null}}


id: PBO:0047226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 228 member B","termid":"PBO:0047226"}


id: PBO:0045106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diencephalon/mesencephalon homeobox 1","termid":"PBO:0045106"}


id: PBO:0031270
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fragmented_DNA","termid":"PBO:0031270"}


id: PATO:0001406
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A nucleate quality inhering in a bearer by virtue of the bearer's having two nuclei.","definition_xrefs":["Biology-online:Biology-online"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multinucleate","termid":"PATO:0001908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binucleate","termid":"PATO:0001406"}


id: PBO:0072400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 5","termid":"PBO:0072400"}


id: PBO:0028999
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_from_SRE_promoter","termid":"PBO:0028999"}


id: RO:HOM0000074
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Iterative homology that involves two structures, one of which originated as a duplicate of the other and co-opted the expression of patterning genes of the ancestral structure.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_homocracy_relationship_with","termid":"RO:HOM0000003"},{"relation_name":"is_a","term_name":"in_iterative_homology_relationship_with","termid":"RO:HOM0000066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_paramorphism_relationship_with","synonyms":[{"name":"axis paramorphism","type":"related"}],"termid":"RO:HOM0000074"}


id: GO:0100052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates G1/S transition of mitotic cell cycle.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of G1/S transition of mitotic cell cycle by transcription from RNA polymerase II promoter (obsolete GO:0100052)","termid":"GO:0100052"}


id: MONDO:0007293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leukocyte adhesion deficiency type I (LAD-I) is a form of LAD characterized by life-threatening, recurrent bacterial infections.","definition_xrefs":["Orphanet:99842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte adhesion deficiency","termid":"MONDO:0017570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"leukocyte adhesion deficiency 1","secondary_identifiers":["OMIM:116920","DOID:0110910","UMLS:C0398738","GARD:6893","SCTID:234582006","MEDGEN:98310","NCIT:C4689","MESH:C535887"],"synonyms":[{"name":"ITGB2 leukocyte adhesion deficiency","type":"exact"},{"name":"LAD-I","type":"exact"},{"name":"LAD1","type":"exact"},{"name":"LFA 1 immunodeficiency","type":"related"},{"name":"LFA-I deficiency","type":"exact"},{"name":"LFA1 immunodeficiency","type":"exact"},{"name":"Lad1","type":"related"},{"name":"Lfa1 immunodeficiency","type":"related"},{"name":"lad","type":"related"},{"name":"lad 1","type":"related"},{"name":"lad-I","type":"exact"},{"name":"lad-type I","type":"exact"},{"name":"leukocyte adhesion deficiency","type":"broad"},{"name":"leukocyte adhesion deficiency 1","type":"exact"},{"name":"leukocyte adhesion deficiency caused by mutation in ITGB2","type":"exact"},{"name":"leukocyte adhesion deficiency type 1","type":"exact"},{"name":"leukocyte adhesion deficiency type I","type":"exact"},{"name":"leukocyte adhesion deficiency, type 1","type":"related"},{"name":"leukocyte adhesion deficiency, type I","type":"related"},{"name":"lymphocyte function-associated antigen 1 immunodeficiency","type":"exact"}],"termid":"MONDO:0007293","xrefs":{"Monarch":{"xref_id":"0007293"}}}


id: GO:0070759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of an interleukin-35-mediated signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of interleukin-35-mediated signaling pathway","termid":"GO:0070758"},{"relation_name":"negatively_regulates","term_name":"interleukin-35-mediated signaling pathway","termid":"GO:0070757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of interleukin-35-mediated signaling pathway","synonyms":[{"name":"negative regulation of IL-35-mediated signaling pathway","type":"exact"},{"name":"negative regulation of interleukin-35-mediated signalling pathway","type":"exact"}],"termid":"GO:0070759"}


id: PBO:0029869
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K4_trimethylation","termid":"PBO:0029869"}


id: PBO:0052801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 41, pseudogene","termid":"PBO:0052801"}


id: PBO:0040918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 22","termid":"PBO:0040918"}


id: GO:0100034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates 4,6-pyruvylated galactose residue biosynthetic process.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of 4,6-pyruvylated galactose residue biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100034)","termid":"GO:0100034"}


id: PBO:0034793
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this gene product was previously annotated to the NADH dehydrogenase of the mitochondrial respiratory chain complex I. This mapping was removed because fission yeast lacks the remaining 40 subunits found in mammals (PMID:1518044).","termid":"PBO:0034793"}


id: GO:0033031
data:
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id: GO:0070887
data:
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id: PBO:0063301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PC-esterase domain containing 1B","termid":"PBO:0063301"}


id: PBO:0070644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 15","termid":"PBO:0070644"}


id: SO:0002294
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Mitochondrial displacement loop; a region within mitochondrial DNA in which a short stretch of RNA is paired with one strand of DNA, displacing the original partner DNA strand in this region.","direct_ancestors":[{"relation_name":"is_a","term_name":"D_loop","termid":"SO:0000297"},{"relation_name":"is_a","term_name":"mitochondrial_control_region","termid":"SO:0002293"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial_D_loop","secondary_identifiers":["http://en.wikipedia.org/wiki/D_loop"],"synonyms":[{"name":"Mitochondrial D loop","type":"exact"},{"name":"Mitochondrial displacement loop","type":"exact"}],"termid":"SO:0002294"}


id: PBO:0056673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 31","termid":"PBO:0056673"}


id: PBO:0068209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 516","termid":"PBO:0068209"}


id: PBO:0088004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type 2C protein phosphatase (PP2C); dephosphorylates Hog1p, inactivating osmosensing MAPK cascade; involved in Fus3p activation during pheromone response; deletion affects precursor tRNA splicing, mitochondrial inheritance, and sporulation","termid":"PBO:0088004"}


id: PBO:0074090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC26A5 antisense RNA 1","termid":"PBO:0074090"}


id: PBO:0050793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HTR3E antisense RNA 1","termid":"PBO:0050793"}


id: PR:000027499
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A p38-like stress-activated mitogen-activated protein kinase that is a translation product of the yeast HOG1 gene or a 1:1 ortholog thereof.","definition_xrefs":["PMID:10207620","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase HOG1","pombase_gene_id":"SPAC24B11.06c","synonyms":[{"name":"HOG1","type":"exact"},{"name":"MAP kinase spc1","type":"exact"},{"name":"STY1","type":"related"}],"termid":"PR:000027499"}


id: PBO:0028269
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_nitric_oxide_level_during_cellular_response_to_cadmium_ion","termid":"PBO:0028269"}


id: FYPO:0001763
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which tRNA methylation, the posttranscriptional addition of methyl groups to specific residues in a tRNA molecule, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0030488","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal tRNA modification","termid":"FYPO:0001762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal tRNA methylation","synonyms":[{"name":"normal tRNA methylation during mitotic cell cycle","type":"related"},{"name":"normal tRNA methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0001763"}


id: FYPO:0006998
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone exchange occurs to a lower extent than normal at transposable elements. Histone exchange is replacement, within chromatin, of resident histones or histone subunits with alternative, sometimes variant, histones or subunits.","definition_xrefs":["PomBase:mah","GO:0005721","PMID:26518661","GO:0043486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"},{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"},{"relation_name":"is_a","term_name":"abnormal histone turnover","termid":"FYPO:0007472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000641","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased histone turnover at transposable element during vegetative growth","synonyms":[{"name":"decreased histone exchange at transposable element during mitotic cell cycle","type":"related"},{"name":"decreased histone exchange at transposon during vegetative growth","type":"exact"},{"name":"reduced histone exchange at transposable element during vegetative growth","type":"exact"}],"termid":"FYPO:0006998"}


id: PBO:0050578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate-glucosamine 3-sulfotransferase 3A1","termid":"PBO:0050578"}


id: MONDO:0018714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intermediate, rarely metastasizing blood vessel neoplasm. It is characterized by the presence of lymphatic-like vascular channels and papillary endothelial proliferation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioendothelioma","termid":"MONDO:0021121"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary intralymphatic angioendothelioma","secondary_identifiers":["MEDGEN:138037","ICDO:9135/1","UMLS:C0346087","NCIT:C7526","Orphanet:458768","GARD:21909"],"synonyms":[{"name":"Dabska tumor","type":"exact"},{"name":"Dabska tumour","type":"exact"},{"name":"PILA","type":"exact"},{"name":"malignant endothelial papillary angioendothelioma","type":"exact"},{"name":"papillary Endovascular angioendothelioma","type":"exact"},{"name":"papillary intralymphatic angioendothelioma","type":"exact"},{"name":"pila","type":"exact"}],"termid":"MONDO:0018714","xrefs":{"Monarch":{"xref_id":"0018714"}}}


id: SO:0000562
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Nine nucleotide recombination site, part of V-gene, D-gene or J-gene recombination feature of an immunoglobulin or T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_signal_feature","termid":"SO:0000939"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nonamer_of_recombination_feature_of_vertebrate_immune_system_gene","synonyms":[{"name":"nonamer of recombination feature of vertebrate immune system gene","type":"exact"}],"termid":"SO:0000562"}


id: PBO:0058208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR4500 host gene","termid":"PBO:0058208"}


id: GO:1902660
data:
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id: PR:Q96WW5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A conserved oligomeric Golgi complex subunit 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR21311:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved oligomeric Golgi complex subunit 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11B10.03","secondary_identifiers":["UniProtKB:Q96WW5"],"synonyms":[{"name":"COG complex subunit 8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-COG8","type":"exact"},{"name":"component of oligomeric Golgi complex 8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pi008","type":"related"}],"termid":"PR:Q96WW5"}


id: PBO:0067737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 36","termid":"PBO:0067737"}


id: FYPO:0001848
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which ferric-chelate reductase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal ferric-chelate reductase activity","termid":"FYPO:0001847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abolished ferric-chelate reductase activity","synonyms":[{"name":"ferric-chelate reductase activity abolished","type":"exact"}],"termid":"FYPO:0001848"}


id: PBO:0079312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 6","termid":"PBO:0079312"}


id: GO:1901405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tetrapyrrole catabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of tetrapyrrole metabolic process","termid":"GO:1901402"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole catabolic process","termid":"GO:1901404"},{"relation_name":"negatively_regulates","term_name":"tetrapyrrole catabolic process","termid":"GO:0033015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0033013"},{"rel_name":"regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"negative regulation of tetrapyrrole catabolic process","synonyms":[{"name":"down-regulation of tetrapyrrole breakdown","type":"exact"},{"name":"down-regulation of tetrapyrrole catabolic process","type":"exact"},{"name":"down-regulation of tetrapyrrole catabolism","type":"exact"},{"name":"down-regulation of tetrapyrrole degradation","type":"exact"},{"name":"downregulation of tetrapyrrole breakdown","type":"exact"},{"name":"down regulation of tetrapyrrole breakdown","type":"exact"},{"name":"down regulation of tetrapyrrole catabolic process","type":"exact"},{"name":"down regulation of tetrapyrrole catabolism","type":"exact"},{"name":"down regulation of tetrapyrrole degradation","type":"exact"},{"name":"downregulation of tetrapyrrole catabolic process","type":"exact"},{"name":"downregulation of tetrapyrrole catabolism","type":"exact"},{"name":"downregulation of tetrapyrrole degradation","type":"exact"},{"name":"inhibition of tetrapyrrole breakdown","type":"exact"},{"name":"inhibition of tetrapyrrole catabolic process","type":"narrow"},{"name":"inhibition of tetrapyrrole catabolism","type":"exact"},{"name":"inhibition of tetrapyrrole degradation","type":"exact"},{"name":"negative regulation of tetrapyrrole breakdown","type":"exact"},{"name":"negative regulation of tetrapyrrole catabolism","type":"exact"},{"name":"negative regulation of tetrapyrrole degradation","type":"exact"}],"termid":"GO:1901405"}


id: MONDO:0016542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Immune dysregulation-inflammatory bowel disease-arthritis-recurrent infections syndrome is a rare immune dysregulation disease with immunodeficiency characterized by severe, progressive infantile onset inflammatory bowel disease with pancolitis, perianal disease (ulceration, fistulae), recurrent respiratory, genitourinary and cutaneous infections, arthritis and a high risk of B-cell lymphoma.","definition_xrefs":["Orphanet:238569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"},{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"},{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"immune dysregulation-inflammatory bowel disease-arthritis-recurrent infections syndrome","secondary_identifiers":["UMLS:C4749850","MEDGEN:1661450","NANDO:2200446","GARD:13016"],"synonyms":[{"name":"IL10-related early-onset IBD","type":"exact"},{"name":"IL10-related early-onset inflammatory bowel disease","type":"exact"},{"name":"autosomal recessive early-onset IBD","type":"related"},{"name":"autosomal recessive early-onset inflammatory bowel disease","type":"related"}],"termid":"MONDO:0016542","xrefs":{"Monarch":{"xref_id":"0016542"}}}


id: PBO:0076816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teneurin transmembrane protein 3","termid":"PBO:0076816"}


id: PBO:0086684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by homology to uncharacterized proteins in other fungi","termid":"PBO:0086684"}


id: PBO:0002380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat protein","termid":"PBO:0002380"}


id: GO:0034319
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: butanoyl-CoA + an alcohol = CoA + a butyl ester.","definition_xrefs":["PMID:16361250","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete alcohol O-butanoyltransferase activity (obsolete GO:0034319)","termid":"GO:0034319"}


id: MONDO:0971034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A thyroid gland carcinoma that is characterized by the presence of cribriform, trabecular, follicular, papillary, and solid growth patterns and squamoid morulae formation.","definition_xrefs":["DOID:0081458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland carcinoma","termid":"MONDO:0015075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thyroid gland cribriform morular carcinoma","termid":"MONDO:0971034","xrefs":{"Monarch":{"xref_id":"0971034"}}}


id: FYPO:0005537
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomerase holoenzyme complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal telomerase holoenzyme complex assembly","synonyms":[{"name":"normal telomerase holoenzyme complex assembly during mitotic cell cycle","type":"related"},{"name":"normal telomerase holoenzyme complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0005537"}


id: FYPO:0000951
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable and has an abnormally low volume.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"small vegetative cell","termid":"FYPO:0000645"},{"relation_name":"has_part","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"small vegetative cell","termid":"FYPO:0000645"},{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000004","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"inviable small vegetative cell","synonyms":[{"name":"inviable small vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; small vegetative cell","type":"exact"},{"name":"small inviable cell during vegetative growth","type":"exact"},{"name":"small inviable vegetative cell","type":"exact"}],"termid":"FYPO:0000951"}


id: PBO:0083174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps ORF TRM5/YHR070W","termid":"PBO:0083174"}


id: GO:0090740
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the pigment granule membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["PMID:11294610"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of pigment granule membrane (obsolete GO:0090740)","termid":"GO:0090740"}


id: MONDO:0035350
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"letrozole toxicity","secondary_identifiers":["MEDGEN:1826119","UMLS:C5681461","Orphanet:529831"],"termid":"MONDO:0035350","xrefs":{"Monarch":{"xref_id":"0035350"}}}


id: MONDO:0011830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lissencephaly due to LIS1 mutation is a cerebral malformation with epilepsy characterized predominantly by posterior isolated lissencephaly with developmental delay, intellectual disability and epilepsy that usually evolves from West syndrome to Lennox-Gastaut syndrome. Additional features include muscular hypotonia, acquired microcephaly, failure to thrive and poor control of airways leading to aspiration pneumonia.","definition_xrefs":["Orphanet:95232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic lissencephaly","termid":"MONDO:0015146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly due to LIS1 mutation","secondary_identifiers":["OMIM:607432","DOID:0112237","UMLS:C4749301","MEDGEN:1657090","GARD:16838"],"synonyms":[{"name":"LIS1","type":"related"},{"name":"PAFAH1B1-related lissencephaly","type":"exact"},{"name":"lissencephaly 1","type":"related"},{"name":"lissencephaly sequence, isolated","type":"related"},{"name":"lissencephaly, classic","type":"related"},{"name":"subcortical band heterotopia","type":"related"},{"name":"subcortical laminar heterotopia","type":"related"}],"termid":"MONDO:0011830","xrefs":{"Monarch":{"xref_id":"0011830"}}}


id: PR:O13370
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase Pl10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase ded1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1795.11","secondary_identifiers":["UniProtKB:O13370"],"synonyms":[{"name":"SPCC1795.11","type":"related"},{"name":"Spom972h-D1Pas1","type":"exact"},{"name":"dep1","type":"related"},{"name":"moc2","type":"related"},{"name":"multicopy suppressor of overexpressed cyr1 protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sum3","type":"related"}],"termid":"PR:O13370"}


id: GO:2000087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesonephric glomerulus development.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesonephros development","termid":"GO:0061217"},{"relation_name":"is_a","term_name":"regulation of glomerulus development","termid":"GO:0090192"},{"relation_name":"regulates","term_name":"mesonephric glomerulus development","termid":"GO:0061224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesonephric glomerulus development","termid":"GO:2000087"}


id: PBO:0004678
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.193","termid":"PBO:0004678"}


id: MOD:01641
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-leucine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-leucine residue","termid":"MOD:00911"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-leucine removal","termid":"MOD:01641"}


id: FYPO:0003737
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, begins later than normal during G2 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of protein phosphorylation during vegetative growth","termid":"FYPO:0002830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"delayed onset of protein phosphorylation during mitotic G2 phase","synonyms":[{"name":"delayed onset of protein phosphorylation during mitotic G2 phase during vegetative growth","type":"exact"},{"name":"delayed onset of protein phosphorylation during mitotic G2-phase","type":"exact"},{"name":"delayed onset of protein/peptide phosphorylation during mitotic G2 phase","type":"exact"},{"name":"delayed protein phosphorylation during mitotic G2 phase","type":"exact"}],"termid":"FYPO:0003737"}


id: PBO:0051526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor like 2","termid":"PBO:0051526"}


id: GO:1904954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any canonical Wnt signaling pathway that is involved in midbrain dopaminergic neuron differentiation.","definition_xrefs":["GOC:PARL","GO_REF:0000060","GOC:TermGenie","GOC:bf","PMID:22988876"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation (obsolete GO:1904954)","synonyms":[{"name":"Wnt receptor signaling pathway through beta-catenin involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"Wnt receptor signaling pathway through beta-catenin involved in mDA neuron differentiation","type":"exact"},{"name":"Wnt receptor signaling pathway through beta-catenin involved in midbrain DA neurogenesis","type":"exact"},{"name":"Wnt receptor signaling pathway through beta-catenin involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"Wnt receptor signaling pathway through beta-catenin involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin involved in mDA neuron differentiation","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin involved in midbrain DA neurogenesis","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin involved in mDA neuron differentiation","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin involved in midbrain DA neurogenesis","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"canonical Wnt signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"canonical Wnt signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"canonical Wnt signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"canonical Wnt signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"canonical Wnt-mediated midbrain DA neuron differentiation","type":"exact"},{"name":"frizzled-1 receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"frizzled-1 receptor signaling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"frizzled-1 receptor signaling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"frizzled-1 receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"frizzled-1 receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"narrow"}],"termid":"GO:1904954"}


id: MONDO:0012545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neutral lipid storage disease","termid":"MONDO:0015611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0002561"],"is_obsolete":false,"name":"neutral lipid storage myopathy","secondary_identifiers":["OMIM:610717","Orphanet:98908","UMLS:C1853136","SCTID:699315005","icd11.foundation:1512138529","GARD:10288","MEDGEN:339913"],"synonyms":[{"name":"NLSDM","type":"exact"},{"name":"neutral lipid storage disease with myopathy","type":"related"},{"name":"neutral lipid storage disease with myopathy without ichthyosis","type":"exact"},{"name":"neutral lipid storage disease without ichthyosis","type":"related"},{"name":"triglyceride deposit cardiomyovasculopathy","type":"related"}],"termid":"MONDO:0012545","xrefs":{"Monarch":{"xref_id":"0012545"}}}


id: GO:0050366
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: feruloyl-CoA + tyramine = CoA + N-feruloyltyramine.","definition_xrefs":["MetaCyc:TYRAMINE-N-FERULOYLTRANSFERASE-RXN","EC:2.3.1.110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"tyramine N-feruloyltransferase activity","secondary_identifiers":["RHEA:19685"],"synonyms":[{"name":"feruloyl-CoA tyramine N-feruloyl-CoA transferase activity","type":"related"},{"name":"feruloyl-CoA:tyramine N-(hydroxycinnamoyl)transferase activity","type":"related"},{"name":"feruloyltyramine synthase activity","type":"related"},{"name":"tyramine N-feruloyl-CoA transferase activity","type":"related"},{"name":"tyramine feruloyltransferase activity","type":"related"}],"termid":"GO:0050366"}


id: GO:1990537
data:
  {"annotated_genes":["SJAG_01224","SJAG_02624","SJAG_01613","SJAG_00918"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98116,98716,106989,117637],"is_not":false,"summary":null,"term":"GO:1990537"}]},"cv_name":"cellular_component","definition":"Any of the mitotic spindle microtubules that come from each pole and overlap at the spindle midzone.","definition_xrefs":["PMID:16079915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polar microtubule","termid":"GO:0005827"},{"relation_name":"is_a","term_name":"mitotic spindle microtubule","termid":"GO:1990498"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00918":null,"SJAG_01224":null,"SJAG_01613":null,"SJAG_02624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0072686"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0072686","GO:0005575"],"is_obsolete":false,"name":"mitotic spindle polar microtubule","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990537","terms_by_termid":{"GO:1990537":null}}


id: PBO:0083338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the uncharacterized ORFs YLR462W and YLR464W","termid":"PBO:0083338"}


id: PBO:0064225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCE1 antisense RNA 2","termid":"PBO:0064225"}


id: PBO:0074902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 74B","termid":"PBO:0074902"}


id: FYPO:0005735
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is increased during mitotic M-phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to kinetochore during vegetative growth","termid":"FYPO:0003003"},{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore during mitotic M phase","termid":"FYPO:0008164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to kinetochore during mitotic M phase","synonyms":[{"name":"increased protein localisation to kinetochore during mitosis","type":"exact"},{"name":"increased protein localization to kinetochore during mitotic M phase","type":"related"},{"name":"increased protein localization to kinetochore during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0005735"}


id: GO:0099519
data:
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id: GO:0072369
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id: PBO:0060337
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id: PR:Q9UTB4
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id: PBO:0081853
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id: GO:0045304
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id: GO:0002395
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id: PBO:0073130
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id: MONDO:0032577
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id: PBO:0002266
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id: PBO:0082667
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id: PBO:0029809
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id: GO:0005368
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id: MONDO:1011715
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id: PR:O13622
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id: PBO:0109261
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id: GO:0033043
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biogenesis","type":"related"}],"termid":"GO:0033043","terms_by_termid":{"GO:0003400":null,"GO:0007063":null,"GO:0007088":null,"GO:0007091":null,"GO:0007094":null,"GO:0010637":null,"GO:0010821":null,"GO:0010845":null,"GO:0010846":null,"GO:0030833":null,"GO:0031110":null,"GO:0031117":null,"GO:0031453":null,"GO:0032210":null,"GO:0032215":null,"GO:0032231":null,"GO:0032888":null,"GO:0032889":null,"GO:0032956":null,"GO:0033047":null,"GO:0033316":null,"GO:0034316":null,"GO:0040020":null,"GO:0045128":null,"GO:0045841":null,"GO:0045842":null,"GO:0045875":null,"GO:0045876":null,"GO:0051016":null,"GO:0051598":null,"GO:0060236":null,"GO:0061191":null,"GO:0061192":null,"GO:0062123":null,"GO:0070507":null,"GO:0090053":null,"GO:0090055":null,"GO:0090141":null,"GO:0090258":null,"GO:0090266":null,"GO:0090267":null,"GO:0090297":null,"GO:0110161":null,"GO:0110162":null,"GO:0120306":null,"GO:0140429":null,"GO:0140499":null,"GO:1901098":null,"GO:1901673":null,"GO:1902103":null,"GO:1902424":null,"GO:1902425":null,"GO:1902426":null,"GO:1902681":null,"GO:1902845":null,"GO:1902846":null,"GO:1903373":null,"GO:1903380":null,"GO:1903473":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:1905191":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1905560":null,"GO:1905561":null,"GO:1990949":null,"GO:1990950":null,"GO:2000432":null,"GO:2000786":null,"GO:2000816":null}}


id: MONDO:1012103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic hepatic fibrosis, non-human animal","termid":"MONDO:1011775"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic hepatic fibrosis, cattle","secondary_identifiers":["OMIA:000454-9913"],"termid":"MONDO:1012103","xrefs":{"Monarch":{"xref_id":"1012103"}}}


id: FYPO:0004935
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during exit from mitosis is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased RNA level during exit from mitosis","synonyms":[{"name":"decreased RNA accumulation during exit from mitosis","type":"related"},{"name":"decreased RNA level during exit from mitosis during mitotic cell cycle","type":"exact"},{"name":"decreased RNA level during exit from mitosis during vegetative growth","type":"exact"},{"name":"decreased RNA level during mitotic M/G1 transition","type":"related"},{"name":"decreased RNA level during mitotic exit","type":"exact"},{"name":"decreased transcript level during exit from mitosis","type":"exact"},{"name":"reduced RNA level during exit from mitosis","type":"exact"}],"termid":"FYPO:0004935"}


id: PBO:0088927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEMO1 family, human MEMO1 ortholog, ancient conserved protein, in some organisms this domain is present with ammecr1 which interacts with mediator complex and is implicated in transcription, implicated in signalling and localization to the plasma membrane","termid":"PBO:0088927"}


id: MONDO:1010930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myotubular myopathy 1 that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myotubular myopathy 1, non-human animal","termid":"MONDO:1010202"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubular myopathy 1, domestic cat","secondary_identifiers":["OMIA:001508-9685"],"termid":"MONDO:1010930","xrefs":{"Monarch":{"xref_id":"1010930"}}}


id: GO:0005167
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neurotrophin TRK receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotrophin receptor binding","termid":"GO:0005165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"neurotrophin TRK receptor binding","synonyms":[{"name":"neurotrophin TRK receptor ligand","type":"narrow"}],"termid":"GO:0005167"}


id: PBO:0043374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clustered mitochondria homolog pseudogene 4","termid":"PBO:0043374"}


id: PATO:0000688
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's not occurring or existing at the same time or having the same period or phase.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asynchronous","termid":"PATO:0000688"}


id: MONDO:0859281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with autism and dysmorphic facies","secondary_identifiers":["MEDGEN:1823979","OMIM:620021","UMLS:C5774206"],"termid":"MONDO:0859281","xrefs":{"Monarch":{"xref_id":"0859281"}}}


id: MONDO:0800320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal degeneration","termid":"MONDO:0004580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cone dystrophy 1, X-linked","secondary_identifiers":["UMLS:C1844777","MEDGEN:336778"],"synonyms":[{"name":"COD1","type":"exact"}],"termid":"MONDO:0800320","xrefs":{"Monarch":{"xref_id":"0800320"}}}


id: PBO:0079974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 12","termid":"PBO:0079974"}


id: PBO:0011057
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_target_sequence_feature","termid":"PBO:0011057"}


id: PBO:0052384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 25","termid":"PBO:0052384"}


id: PBO:0083236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; deletion mutation phenotype is likely due to the overlapping verified ORF SKI8/YGL213C","termid":"PBO:0083236"}


id: PBO:0062204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily A member 1","termid":"PBO:0062204"}


id: MONDO:0016295
data:
  {"annotated_genes":["SJAG_03052","SJAG_02056","SJAG_02518","SJAG_02716"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85921,85922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008083"},{"annotations":[85322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009744"},{"annotations":[85332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008767"}]},"cv_name":"mondo","definition":"A group of inherited progressive degenerative brain diseases characterized clinically by a decline of mental and other capacities, epilepsy, and vision loss through retinal degeneration, and histopathologically by intracellular accumulation of an autofluorescent material, ceroid lipofuscin, in the neuronal cells in the brain and in the retina.","definition_xrefs":["Orphanet:216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal lipid storage disorder","termid":"MONDO:0019245"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02056":null,"SJAG_02518":null,"SJAG_02716":null,"SJAG_03052":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066","MONDO:0002525","MONDO:0005559"],"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:42012007","NANDO:2200573","NCIT:C61257","OMIMPS:256730","icd11.foundation:1568332253","NANDO:1200150","GARD:10739","ICD10CM:E75.4","UMLS:C0027877","DOID:14503","MEDGEN:10326"],"synonyms":[{"name":"NCL","type":"exact"},{"name":"ceroid lipofuscinoses","type":"exact"},{"name":"hereditary ceroid lipofuscinosis","type":"exact"},{"name":"neuronal ceroid lipofuscinosis","type":"exact"}],"termid":"MONDO:0016295","terms_by_termid":{"MONDO:0008083":null,"MONDO:0008767":null,"MONDO:0009744":null},"xrefs":{"Monarch":{"xref_id":"0016295"}}}


id: GO:0032609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interferon-gamma due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels. Interferon-gamma is also known as type II interferon.","definition_xrefs":["GOC:mah","PMID:15546383","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"type II interferon production","secondary_identifiers":["GO:0042095","GO:0072643"],"synonyms":[{"name":"IFNG production","type":"exact"},{"name":"interferon-gamma biosynthetic process","type":"narrow"},{"name":"interferon-gamma production","type":"exact"},{"name":"interferon-gamma secretion","type":"narrow"},{"name":"type II IFN production","type":"exact"}],"termid":"GO:0032609"}


id: FYPO:0003489
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to ionizing radiation is abnormal. Normally, cell cycle progression is slowed or arrested transiently following exposure to ionizing radiation. The most common abnormality is for the cell cycle to progress as in the absence of ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation during cellular response to ionizing radiation","synonyms":[{"name":"abnormal cell cycle regulation during cellular response to ionizing radiation","type":"exact"},{"name":"abnormal cell cycle regulation during cellular response to ionizing radiation during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle delay following ionizing radiation","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to IR","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle regulation in response to ionizing radiation","type":"exact"}],"termid":"FYPO:0003489"}


id: PBO:0075060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-23","termid":"PBO:0075060"}


id: GO:1990262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of anti-Mullerian hormone to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. Upon ligand binding, the receptor  forms a complex consisting of two type II and two type I transmembrane serine/threonine kinases. Type II receptors phosphorylate and activate type I receptors which autophosphorylate, then bind and activate SMAD transcriptional regulators.","definition_xrefs":["GOC:hjd","PMID:23624077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein serine/threonine kinase signaling pathway","termid":"GO:0007178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"anti-Mullerian hormone receptor signaling pathway","synonyms":[{"name":"anti-Mullerian hormone signaling pathway","type":"exact"}],"termid":"GO:1990262"}


id: FYPO:0003877
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell undergoes one round of cell division, instead of the normal two rounds, prior to entering quiescence (G0).","definition_xrefs":["PomBase:al","PMID:20133687","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal G1 to G0 transition","termid":"FYPO:0000427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"single cell division prior to G0 entry","synonyms":[{"name":"G0 to G1 transition after single cell division","type":"exact"},{"name":"one cell division prior to G0 entry","type":"exact"},{"name":"single cell division prior to cell quiescence entry","type":"exact"},{"name":"single cell division prior to quiescence entry","type":"exact"}],"termid":"FYPO:0003877"}


id: GO:0003795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Inhibits the growth of, or directly kills, microbial cells.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete antimicrobial peptide activity (obsolete GO:0003795)","synonyms":[{"name":"antimicrobial peptide activity","type":"exact"}],"termid":"GO:0003795"}


id: PBO:0047572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 23","termid":"PBO:0047572"}


id: PBO:0004990
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal disorders","termid":"PBO:0004990"}


id: GO:0043862
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: arginine(out) + agmatine(in) = arginine(in) + agmatine(out).","definition_xrefs":["PMID:17099215","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"arginine:agmatine antiporter activity","synonyms":[{"name":"AdiC","type":"related"},{"name":"arginine-agmatine antiporter activity","type":"exact"},{"name":"arginine-agmatine exchange transporter activity","type":"exact"},{"name":"arginine/agmatine antiporter activity","type":"exact"}],"termid":"GO:0043862"}


id: MONDO:0018213
data:
  {"annotated_genes":["SJAG_04178","SJAG_02119","SJAG_02305"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013584"},{"annotations":[86431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008086"},{"annotations":[86524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013337"}]},"cv_name":"mondo","definition":"Hereditary sensory neuropathy type I (HSN I) is a slowly progressive neurological disorder characterized by prominent predominantly distal sensory loss, autonomic disturbances, autosomal dominant inheritance, and juvenile or adulthood disease onset.","definition_xrefs":["Orphanet:36386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy","termid":"MONDO:0015364"},{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02119":null,"SJAG_02305":null,"SJAG_04178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"hereditary sensory and autonomic neuropathy type 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["PMID:18348718","icd11.foundation:1989773046","NORD:1237","SCTID:397734008","GARD:6635","MEDGEN:5645","UMLS:C0020071","DOID:0070162"],"synonyms":[{"name":"HSAN 1","type":"related"},{"name":"HSAN1","type":"exact"},{"name":"HSN1","type":"related"},{"name":"Hereditary Sensory Neuropathy Type I","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy type I","type":"exact"},{"name":"hereditary sensory neuropathy type 1","type":"related"},{"name":"neuropathy hereditary sensory and autonomic type 1","type":"related"},{"name":"neuropathy hereditary sensory radicular, autosomal dominant","type":"related"}],"termid":"MONDO:0018213","terms_by_termid":{"MONDO:0008086":null,"MONDO:0013337":null,"MONDO:0013584":null},"xrefs":{"Monarch":{"xref_id":"0018213"}}}


id: PBO:0004138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-oxoglutarate and Fe(II) dioxygenase domain containing protein 1","termid":"PBO:0004138"}


id: MONDO:0030934
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal dominant 64","secondary_identifiers":["MEDGEN:1784554","UMLS:C5543067","OMIM:619188","GARD:16478"],"synonyms":[{"name":"MRD64","type":"exact"},{"name":"intellectual developmental disorder, autosomal dominant 64","type":"exact"},{"name":"mental retardation, autosomal dominant 64","type":"exact"}],"termid":"MONDO:0030934","xrefs":{"Monarch":{"xref_id":"0030934"}}}


id: MONDO:0001095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroblastoma arising from the mediastinum.","definition_xrefs":["NCIT:C6628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mediastinal neural neoplasm","termid":"MONDO:0003098"},{"relation_name":"is_a","term_name":"neuroblastoma","termid":"MONDO:0005072"},{"relation_name":"is_a","term_name":"mediastinal cancer","termid":"MONDO:0005843"},{"relation_name":"is_a","term_name":"peripheral nervous system cancer","termid":"MONDO:0021089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mediastinum neuroblastoma","secondary_identifiers":["EFO:1000367","DOID:10660","UMLS:C1334673","MEDGEN:235313"],"synonyms":[{"name":"mediastinal neuroblastoma","type":"related"},{"name":"mediastinum neuroblastoma","type":"exact"},{"name":"neuroblastoma of mediastinum","type":"exact"},{"name":"neuroblastoma of the mediastinum","type":"related"}],"termid":"MONDO:0001095","xrefs":{"Monarch":{"xref_id":"0001095"}}}


id: MONDO:0009629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Desbuquois dysplasia in which the cause of the disease is a mutation in the CANT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Desbuquois dysplasia","termid":"MONDO:0015426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Desbuquois dysplasia 1","secondary_identifiers":["MEDGEN:860583","UMLS:C4012146","OMIM:251450","GARD:16451"],"synonyms":[{"name":"CANT1 Desbuquois dysplasia","type":"exact"},{"name":"DBQD1","type":"related"},{"name":"Desbuquois dysplasia 1","type":"exact"},{"name":"Desbuquois dysplasia caused by mutation in CANT1","type":"exact"},{"name":"Desbuquois dysplasia type 1","type":"exact"},{"name":"Desbuquois dysplasia, Kim variant","type":"related"},{"name":"desbuquois syndrome","type":"related"},{"name":"micromelic dwarfism with vertebral and metaphyseal abnormalities and advanced carpotarsal ossification","type":"related"}],"termid":"MONDO:0009629","xrefs":{"Monarch":{"xref_id":"0009629"}}}


id: PBO:0005187
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.15","termid":"PBO:0005187"}


id: GO:0050830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to bacterium","termid":"GO:0042742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to Gram-positive bacterium","synonyms":[{"name":"Gram-positive antibacterial peptide activity","type":"related"},{"name":"defence response to Gram-positive bacteria","type":"exact"},{"name":"defence response to Gram-positive bacterium","type":"exact"},{"name":"defense response to Gram-positive bacteria","type":"exact"}],"termid":"GO:0050830"}


id: PBO:0071088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 90","termid":"PBO:0071088"}


id: GO:0031963
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A nuclear receptor activity regulated by cortisol binding and modulating the transcription of specific gene sets transcribed by RNA polymerase II.","definition_xrefs":["GOC:mah","PMID:12511169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear glucocorticoid receptor activity","termid":"GO:0004883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003700"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0140110","GO:0038023","GO:0003700","GO:0003674"],"is_obsolete":false,"name":"nuclear cortisol receptor activity","synonyms":[{"name":"cortisol receptor activity","type":"broad"}],"termid":"GO:0031963"}


id: PBO:0033815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex subunit Psm3/Smc3","termid":"PBO:0033815"}


id: PBO:0090481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-A chaperone, CHD family Hrp1","termid":"PBO:0090481"}


id: GO:0005619
data:
  {"annotated_genes":["SJAG_04236","SJAG_03013","SJAG_04771","SJAG_01321","SJAG_03057","SJAG_03483","SJAG_02916"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89723,108559,113575,113862,117288],"is_not":false,"summary":null,"term":"GO:0005619"},{"annotations":[91251],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005631"},{"annotations":[86993],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005632"}]},"cv_name":"cellular_component","definition":"The specialized cell wall of the ascospore (spore), which is the product of meiotic division. Examples of this component are found in Fungi.","definition_xrefs":["GOC:vw","ISBN:0879693568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal-type cell wall","termid":"GO:0009277"},{"relation_name":"is_a","term_name":"spore wall","termid":"GO:0031160"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01321":null,"SJAG_02916":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03483":null,"SJAG_04236":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"ascospore wall","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fungal-type spore wall","type":"broad"}],"termid":"GO:0005619","terms_by_termid":{"GO:0005619":null,"GO:0005631":null,"GO:0005632":null}}


id: PBO:0052993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LAMA4 antisense RNA 1","termid":"PBO:0052993"}


id: PBO:0081522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 431","termid":"PBO:0081522"}


id: GO:0047842
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-dehydro-L-gulonate + H+ = L-xylulose + CO2.","definition_xrefs":["EC:4.1.1.34","RHEA:11084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"dehydro-L-gulonate decarboxylase activity","secondary_identifiers":["MetaCyc:DEHYDRO-L-GULONATE-DECARBOXYLASE-RXN","Reactome:R-HSA-5662473","KEGG_REACTION:R01905"],"synonyms":[{"name":"3-dehydro-L-gulonate carboxy-lyase (L-xylulose-forming)","type":"related"},{"name":"3-dehydro-L-gulonate carboxy-lyase activity","type":"related"},{"name":"3-keto-L-gulonate decarboxylase activity","type":"related"},{"name":"keto-L-gulonate decarboxylase activity","type":"related"}],"termid":"GO:0047842"}


id: GO:1903289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of ATP catabolic process.","definition_xrefs":["GOC:BHF","PMID:10636900","GO_REF:0000058","GOC:TermGenie","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ATP catabolic process (obsolete GO:1903289)","synonyms":[{"name":"regulation of ATP breakdown","type":"exact"},{"name":"regulation of ATP catabolism","type":"exact"},{"name":"regulation of ATP degradation","type":"exact"},{"name":"regulation of ATP hydrolysis","type":"narrow"}],"termid":"GO:1903289"}


id: GO:0035480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell that contributes to heart induction.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of Notch signaling pathway involved in heart induction (obsolete GO:0035480)","synonyms":[{"name":"regulation of Notch signalling pathway involved in heart induction","type":"exact"}],"termid":"GO:0035480"}


id: GO:0048579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces long-day photoperiodism, where the response associated with the photoperiodism is flowering. Flowering is defined by the switch from the vegetative to the reproductive phase.","definition_xrefs":["ISBN:0582015952","ISBN:0709408862","GOC:jid","GOC:pj","ISBN:0697037754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of post-embryonic development","termid":"GO:0048581"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of long-day photoperiodism, flowering","termid":"GO:0048586"},{"relation_name":"negatively_regulates","term_name":"long-day photoperiodism, flowering","termid":"GO:0048574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of long-day photoperiodism, flowering","synonyms":[{"name":"down regulation of long-day photoperiodism, flowering","type":"exact"},{"name":"down-regulation of long-day photoperiodism, flowering","type":"exact"},{"name":"downregulation of long-day photoperiodism, flowering","type":"exact"},{"name":"inhibition of long-day photoperiodism, flowering","type":"narrow"}],"termid":"GO:0048579"}


id: FYPO:0006039
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic metaphase chromosome recapture does not proceed until the kinetochore has moved all the way to the spindle pole body (SPB), but kinetochores instead pause abnormally near the SPB.","definition_xrefs":["PMID:27146110","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic metaphase chromosome recapture","termid":"FYPO:0005362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000641","FYPO:0001985","FYPO:0000138","FYPO:0000337","FYPO:0000002","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"incomplete mitotic metaphase chromosome recapture","synonyms":[{"name":"incomplete chromosome recapture during mitosis","type":"exact"},{"name":"incomplete chromosome recapture during mitotic metaphase","type":"exact"},{"name":"incomplete kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"incomplete metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"incomplete mitotic metaphase chromosome recapture during vegetative growth","type":"exact"},{"name":"incomplete mitotic metaphase kinetochore retrieval","type":"exact"},{"name":"incomplete sister kinetochore recapture","type":"exact"}],"termid":"FYPO:0006039"}


id: PBO:0058080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4298","termid":"PBO:0058080"}


id: FYPO:0000299
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony (obsolete FYPO:0000299)","synonyms":[{"name":"inviable microcolony formation","type":"exact"},{"name":"microcolony formation","type":"broad"}],"termid":"FYPO:0000299"}


id: GO:0070027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of carbon monoxide (CO).","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sensor activity","termid":"GO:0140299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0140299"],"is_obsolete":false,"name":"carbon monoxide sensor activity","synonyms":[{"name":"carbon monoxide sensing activity","type":"exact"}],"termid":"GO:0070027"}


id: PBO:0083040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta subunit of the oligosaccharyl transferase glycoprotein complex; complex is required for N-linked glycosylation of proteins in the endoplasmic reticulum","termid":"PBO:0083040"}


id: PBO:0070780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 10","termid":"PBO:0070780"}


id: MOD:00575
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:361","PubMed:15174056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized threonine biotinylated with biotin hydrazide","synonyms":[{"name":"Thrbiotinhydrazide","type":"related"},{"name":"oxidized Threonine biotinylated with biotin hydrazide","type":"related"}],"termid":"MOD:00575"}


id: PBO:0085730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the regulation of endocytosis; transiently recruited to actin cortical patches in a SLA1-dependent manner after late coat component assembly; GFP-fusion protein localizes to the periphery, cytoplasm, bud, and bud neck","termid":"PBO:0085730"}


id: GO:0005322
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete low-density lipoprotein (obsolete GO:0005322)","synonyms":[{"name":"LDL","type":"exact"},{"name":"low-density lipoprotein","type":"exact"}],"termid":"GO:0005322"}


id: PBO:0043116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIAO2A pseudogene 1","termid":"PBO:0043116"}


id: MONDO:0001357
data:
  {"annotated_genes":["SJAG_01007"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008787"}]},"cv_name":"mondo","definition":"Anemia caused by the reduction of hemoglobin in relation to the red cell volume. As a result, the red cells have an area of central pallor which is increased in size. The leading cause is iron deficiency.","definition_xrefs":["NCIT:C34380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"hypochromic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:8065","HP:0001931","DOID:11759","SCTID:44452003","UMLS:C0002884"],"synonyms":[{"name":"anaemia hypochromic","type":"exact"},{"name":"anemia hypochromic","type":"exact"},{"name":"hypochromic anaemia (disease)","type":"exact"},{"name":"hypochromic anemia","type":"exact"},{"name":"hypochromic anemia (disease)","type":"exact"}],"termid":"MONDO:0001357","terms_by_termid":{"MONDO:0008787":null},"xrefs":{"Monarch":{"xref_id":"0001357"}}}


id: MONDO:0013720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any classic complement early component deficiency in which the cause of the disease is a mutation in the C4B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic complement early component deficiency","termid":"MONDO:0000015"},{"relation_name":"is_a","term_name":"immunodeficiency due to a classical component pathway complement deficiency","termid":"MONDO:0015699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"complement component 4b deficiency","secondary_identifiers":["DOID:0060298","GARD:15797","MEDGEN:482271","OMIM:614379","UMLS:C3280641"],"synonyms":[{"name":"C4B classic complement early component deficiency","type":"exact"},{"name":"C4B deficiency","type":"related"},{"name":"C4BD","type":"related"},{"name":"classic complement early component deficiency caused by mutation in C4B","type":"exact"},{"name":"complement component 4B deficiency","type":"related"},{"name":"complement component 4b deficiency","type":"exact"}],"termid":"MONDO:0013720","xrefs":{"Monarch":{"xref_id":"0013720"}}}


id: GO:0002622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of B cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation","termid":"GO:0002577"},{"relation_name":"is_a","term_name":"regulation of B cell mediated immunity","termid":"GO:0002712"},{"relation_name":"regulates","term_name":"B cell antigen processing and presentation","termid":"GO:0002450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of B cell antigen processing and presentation","synonyms":[{"name":"regulation of B lymphocyte antigen processing and presentation","type":"exact"},{"name":"regulation of B-cell antigen processing and presentation","type":"exact"},{"name":"regulation of B-lymphocyte antigen processing and presentation","type":"exact"}],"termid":"GO:0002622"}


