# terms

id: MOD:00325
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to L-beta-methylthioasparagine.","definition_xrefs":["Unimod:39#N","RESID:AA0320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"},{"relation_name":"is_a","term_name":"methylthiolated residue","termid":"MOD:01153"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-beta-methylthioasparagine","synonyms":[{"name":"(2R,3Xi)-2-amino-3-(methylsulfanyl)-4-butanediamic acid","type":"exact"},{"name":"2,4-diamino-3-(methylsulfanyl)-4-oxobutanoic acid","type":"exact"},{"name":"3-(methylthio)-L-asparagine","type":"exact"},{"name":"3-carboxamido-S-methyl-cysteine","type":"exact"},{"name":"Beta-methylthiolation","type":"related"},{"name":"Methylthio","type":"related"},{"name":"beta-(methylthio)asparagine","type":"exact"}],"termid":"MOD:00325"}


id: PBO:0065290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich transmembrane protein 4","termid":"PBO:0065290"}


id: PBO:0004506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pantothenate transporter Liz1","termid":"PBO:0004506"}


id: PBO:0059472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSL complex subunit 2","termid":"PBO:0059472"}


id: MONDO:0012650
data:
  {"annotated_genes":["SJAG_04199"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86275],"is_not":false,"summary":null,"term":"MONDO:0012650"}]},"cv_name":"mondo","definition":"Cernunnos-XLF deficiency is a rare form of combined immunodeficiency characterized by microcephaly, growth retardation, and T and B cell lymphopenia.","definition_xrefs":["Orphanet:169079"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"T-B- severe combined immunodeficiency","termid":"MONDO:0017855"},{"relation_name":"is_a","term_name":"familial severe combined immunodeficiency","termid":"MONDO:0031520"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04199":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Cernunnos-XLF deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:369590","MESH:C566970","UMLS:C1969799","SCTID:720853005","GARD:17045","OMIM:611291"],"synonyms":[{"name":"Cernunnos XLFD","type":"exact"},{"name":"Cernunnos deficiency","type":"exact"},{"name":"Cernunnos-XLF deficiency","type":"exact"},{"name":"NHEJ1 deficiency","type":"exact"},{"name":"Nhej1 syndrome","type":"related"},{"name":"SCID, autosomal recessive, T cell-negative, B cell-negative, NK cell-positive, and sensitivity to ionising radiation due to Nhej1 deficiency","type":"related"},{"name":"SCID, autosomal recessive, T cell-negative, B cell-negative, NK cell-positive, and sensitivity to ionizing radiation due to Nhej1 deficiency","type":"related"},{"name":"SCID, autosomal recessive, T cell-negative, B cell-negative, NK cell-positive, with microcephaly, Growth retardation, and sensitivity to ionising radiation","type":"related"},{"name":"SCID, autosomal recessive, T cell-negative, B cell-negative, NK cell-positive, with microcephaly, Growth retardation, and sensitivity to ionizing radiation","type":"related"},{"name":"combined immunodeficiency-microcephaly-growth retardation-sensitivity to ionising radiation syndrome","type":"exact"},{"name":"combined immunodeficiency-microcephaly-growth retardation-sensitivity to ionizing radiation syndrome","type":"exact"},{"name":"severe combined immunodeficiency with microcephaly, growth retardation, and sensitivity to ionising radiation","type":"related"},{"name":"severe combined immunodeficiency with microcephaly, growth retardation, and sensitivity to ionizing radiation","type":"related"},{"name":"severe combined immunodeficiency with sensitivity to ionising radiation due to Nhej1 deficiency","type":"related"},{"name":"severe combined immunodeficiency with sensitivity to ionizing radiation due to Nhej1 deficiency","type":"related"}],"termid":"MONDO:0012650","terms_by_termid":{"MONDO:0012650":null},"xrefs":{"Monarch":{"xref_id":"0012650"}}}


id: GO:0002556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of serotonin by a basophil or group of basophils.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serotonin secretion involved in inflammatory response","termid":"GO:0002442"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"basophil degranulation","termid":"GO:0002561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"serotonin secretion by basophil","synonyms":[{"name":"serotonin release by basophil","type":"related"}],"termid":"GO:0002556"}


id: PBO:0052914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 13-6, pseudogene","termid":"PBO:0052914"}


id: PBO:0029511
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_stubby_cells_(obsolete_FYPO:0002203)","termid":"PBO:0029511"}


id: PBO:0085700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in ribosome biogenesis; forms a nucleolar complex with Mak21p that binds to 90S and 66S pre-ribosomes; forms a nuclear complex with Noc3p that binds to 66S pre-ribosomes; both complexes mediate intranuclear transport of ribosomal precursors; acts as part of a Mak21p-Noc2p-Rrp5p module that associates with nascent pre-rRNA during transcription and has a role in bigenesis of the large ribosomal subunit","termid":"PBO:0085700"}


id: PBO:0082985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic aldehyde dehydrogenase; activated by Mg2+ and utilizes NADP+ as the preferred coenzyme; required for conversion of acetaldehyde to acetate; constitutively expressed; locates to the mitochondrial outer surface upon oxidative stress","termid":"PBO:0082985"}


id: PR:Q09684
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tht1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear fusion protein tht1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13C5.03","synonyms":[{"name":"Spom972h-tht1","type":"exact"},{"name":"Twin horsetail protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09684"}


id: FYPO:0002075
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which none of the cells in the population are viable at a high temperature in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable vegetative cell population at high temperature (obsolete FYPO:0002075)","termid":"FYPO:0002075"}


id: MONDO:0022013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by spontaneous longitudinal transmural rupture of the esophagus, usually in its distal part.","definition_xrefs":["PMID:27982294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Boerhaave syndrome","secondary_identifiers":["MESH:C536571","UMLS:C0238115","SCTID:19995004","MEDGEN:65948"],"synonyms":[{"name":"Boerhaave syndrome","type":"exact"},{"name":"Boerhaave's syndrome","type":"related"},{"name":"Boerhave syndrome","type":"related"},{"name":"boerhaave's syndrome","type":"related"},{"name":"spontaneous esophageal perforation","type":"related"},{"name":"spontaneous perforation of esophagus","type":"related"},{"name":"spontaneous perforation of oesophagus","type":"related"},{"name":"spontaneous perforation of the esophagus","type":"related"},{"name":"spontaneous perforation of the oesophagus","type":"related"},{"name":"spontaneous rupture of esophagus","type":"exact"},{"name":"spontaneous rupture of oesophagus","type":"exact"},{"name":"spontaneous rupture of the esophagus","type":"related"},{"name":"spontaneous rupture of the oesophagus","type":"related"}],"termid":"MONDO:0022013","xrefs":{"Monarch":{"xref_id":"0022013"}}}


id: FYPO:0005607
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which ubiquitination of lysine at position 119 of histone H2B is abnormal. Lysine 119 corresponds to the conserved C-terminal lysine of H2B.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone ubiquitination during vegetative growth","termid":"FYPO:0002921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0001320","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"abnormal histone H2B-K119 ubiquitination during vegetative growth","synonyms":[{"name":"abnormal histone H2B conserved C-terminal lysine ubiquitination","type":"exact"},{"name":"abnormal histone H2B-K119 ubiquitination during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005607"}


id: MONDO:0858989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive spastic paraplegia type 84 (obsolete MONDO:0858989)","termid":"MONDO:0858989","xrefs":{"Monarch":{"xref_id":"0858989"}}}


id: PBO:0053257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoic acid synthetase","termid":"PBO:0053257"}


id: PBO:0064763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase F","termid":"PBO:0064763"}


id: GO:0006928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed, self-propelled movement of a cell or subcellular component without the involvement of an external agent such as a transporter or a pore.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jl","GOC:mlg"],"gene_count":0,"genotype_count":0,"name":"obsolete movement of cell or subcellular component (obsolete GO:0006928)","synonyms":[{"name":"cell movement","type":"related"},{"name":"cellular component motion","type":"exact"},{"name":"cellular component movement","type":"exact"}],"termid":"GO:0006928"}


id: PBO:0044349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 34","termid":"PBO:0044349"}


id: GO:0005789
data:
  {"annotated_genes":["SJAG_05022","SJAG_04701","SJAG_00068","SJAG_02885","SJAG_04316","SJAG_02044","SJAG_03850","SJAG_04513","SJAG_01990","SJAG_01223","SJAG_03609","SJAG_00328","SJAG_04294","SJAG_00959","SJAG_01491","SJAG_01642","SJAG_04319","SJAG_00394","SJAG_00747","SJAG_05013","SJAG_04090","SJAG_05016","SJAG_04119","SJAG_01389","SJAG_03261","SJAG_03315","SJAG_00222","SJAG_02982","SJAG_04053","SJAG_04345","SJAG_00785","SJAG_03764","SJAG_02085","SJAG_00717","SJAG_01939","SJAG_04059","SJAG_02706","SJAG_04615","SJAG_04956","SJAG_03774","SJAG_03715","SJAG_01233","SJAG_00812","SJAG_04127","SJAG_02446","SJAG_03933","SJAG_04363","SJAG_02196","SJAG_00295","SJAG_04110","SJAG_04049","SJAG_00453","SJAG_01329","SJAG_02694","SJAG_02586","SJAG_02354","SJAG_04103","SJAG_01709","SJAG_04583","SJAG_03841","SJAG_02590","SJAG_03930","SJAG_01750","SJAG_02914","SJAG_00434","SJAG_01422","SJAG_02032","SJAG_01848","SJAG_05327","SJAG_04337","SJAG_03878","SJAG_02330","SJAG_00895","SJAG_03024","SJAG_01626","SJAG_00831","SJAG_04986","SJAG_00771","SJAG_02102","SJAG_04231","SJAG_00846","SJAG_05189","SJAG_04938","SJAG_01078","SJAG_00784","SJAG_01180","SJAG_03812","SJAG_04592","SJAG_01460","SJAG_03330","SJAG_02913","SJAG_06514","SJAG_01558","SJAG_02776","SJAG_05414","SJAG_04162","SJAG_04270","SJAG_00530","SJAG_01537","SJAG_00810","SJAG_03333","SJAG_02716","SJAG_04435","SJAG_01006","SJAG_03244","SJAG_01857","SJAG_06383","SJAG_01356","SJAG_02204","SJAG_00175","SJAG_01570","SJAG_01051","SJAG_01134","SJAG_02264","SJAG_00277","SJAG_06425","SJAG_00437","SJAG_00893","SJAG_03750","SJAG_00681","SJAG_02903","SJAG_03657","SJAG_00880","SJAG_05311","SJAG_02719","SJAG_05306","SJAG_04384","SJAG_01127","SJAG_05296","SJAG_00825","SJAG_01785","SJAG_02208","SJAG_00064","SJAG_07010","SJAG_02532","SJAG_03672","SJAG_05348","SJAG_01782","SJAG_03929","SJAG_03737","SJAG_03509","SJAG_00730","SJAG_04023","SJAG_02437","SJAG_01563","SJAG_00131","SJAG_00999","SJAG_02595","SJAG_01803","SJAG_00261","SJAG_03162","SJAG_02717","SJAG_00339","SJAG_00370","SJAG_04018","SJAG_02683","SJAG_04883","SJAG_04952","SJAG_03281","SJAG_04471","SJAG_01069","SJAG_00334","SJAG_04975","SJAG_01227","SJAG_02839","SJAG_04810","SJAG_02588","SJAG_03396","SJAG_05219","SJAG_01300","SJAG_03311","SJAG_03056","SJAG_02065","SJAG_04550","SJAG_00603","SJAG_02056","SJAG_04792","SJAG_02488","SJAG_03506","SJAG_03670","SJAG_02019","SJAG_03992","SJAG_02867","SJAG_01899","SJAG_03345","SJAG_03032","SJAG_00630","SJAG_04165","SJAG_02980","SJAG_04915","SJAG_00919","SJAG_00554","SJAG_01950","SJAG_00906","SJAG_01957","SJAG_03801","SJAG_00360","SJAG_04740","SJAG_00519","SJAG_03018","SJAG_01435","SJAG_01160","SJAG_03831","SJAG_01527","SJAG_01321","SJAG_02120","SJAG_04881","SJAG_02804","SJAG_04954","SJAG_00426","SJAG_03235","SJAG_03943","SJAG_00948","SJAG_02080","SJAG_01999","SJAG_03066","SJAG_03170","SJAG_03955","SJAG_02489","SJAG_02827","SJAG_05278","SJAG_03656","SJAG_03292","SJAG_02640","SJAG_04821","SJAG_03115","SJAG_00284","SJAG_02842","SJAG_04913","SJAG_05274","SJAG_02523","SJAG_04904","SJAG_00557","SJAG_04608","SJAG_00924","SJAG_01860","SJAG_03795","SJAG_04217","SJAG_04451","SJAG_02418","SJAG_00053","SJAG_01416","SJAG_01307","SJAG_01991"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[59033,59741,60844,62329,87266,87311,87706,87948,87998,88034,88127,88241,88401,88979,89027,89040,89133,89140,89307,89725,89772,90049,90074,90659,90706,91012,91288,91387,91425,91497,91630,92026,92348,92428,92515,92535,93012,93033,93119,93151,93245,93246,93699,93872,93996,94119,94129,94999,95099,95193,95577,95675,95824,95909,96033,96197,96272,96388,96449,96827,96941,97595,97698,97864,97895,98093,98322,98351,99505,99515,99721,99739,99787,100266,100327,100512,100573,100724,100840,100973,101039,101103,101656,102503,102539,102601,102610,102686,102906,103272,103477,103583,103960,103982,104096,104191,104471,104704,105374,105474,106208,106794,106881,106981,107017,107036,107194,107331,107502,107510,107908,108148,108217,108732,108772,109290,109406,109531,109565,109603,109637,110233,110318,110395,110476,110574,110796,110810,110945,111297,111550,111846,111860,112025,112044,112503,112611,112888,112962,113122,113676,113685,113702,113823,113831,113894,114170,114275,114280,114391,114707,114728,115104,115267,115352,115630,116044,116233,116471,116877,117120,117322,117819,118121,118299,118374],"is_not":false,"summary":null,"term":"GO:0005789"},{"annotations":[103871,89883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160219"},{"annotations":[97840,93379,98179,94562,105328,101800,109340,116231,94200],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0098554"},{"annotations":[94314,111742,113880,103011,100688,91149,113329,104280],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0072546"},{"annotations":[118082,108128,118926,64192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098826"},{"annotations":[92475,92565,111090,109420,116731,108071],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000506"},{"annotations":[91710,86913,90879,103210,113432],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042765"},{"annotations":[104789,107161,109057,103469,104311,116650,88731],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000836"},{"annotations":[88994],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990604"},{"annotations":[99283,99489,104493,89851,108779,90609,94202,97891],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0098553"},{"annotations":[116340,116812,100850,99144,99524,94808,102069],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0008250"},{"annotations":[107886,90727],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0160005"},{"annotations":[94203,86851,98158,97293,100096,105817,115099],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990578"},{"annotations":[108823,97541,105658,107794],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005784"},{"annotations":[90063,95221,109120,109896],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031207"},{"annotations":[97914,87121,103315,112048],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005787"},{"annotations":[109245,93763],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005785"},{"annotations":[97542],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071261"},{"annotations":[97841,98181,103070],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043541"},{"annotations":[103472,88735],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034098"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding the endoplasmic reticulum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane","termid":"GO:0031090"},{"relation_name":"part_of","term_name":"nuclear outer membrane-endoplasmic reticulum membrane network","termid":"GO:0042175"},{"relation_name":"part_of","term_name":"endoplasmic reticulum 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reticulum membrane","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21802294":null},"synonyms":[{"name":"ER membrane","type":"exact"}],"termid":"GO:0005789","terms_by_termid":{"GO:0000506":null,"GO:0000836":null,"GO:0005784":null,"GO:0005785":null,"GO:0005787":null,"GO:0005789":null,"GO:0008250":null,"GO:0031207":null,"GO:0034098":null,"GO:0042765":null,"GO:0043541":null,"GO:0071261":null,"GO:0072546":null,"GO:0098553":null,"GO:0098554":null,"GO:0098826":null,"GO:0160005":null,"GO:0160219":null,"GO:1990578":null,"GO:1990604":null}}


id: MONDO:0035541
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete split cord malformation type II (obsolete MONDO:0035541)","secondary_identifiers":["Orphanet:573253"],"termid":"MONDO:0035541","xrefs":{"Monarch":{"xref_id":"0035541"}}}


id: PBO:0063848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein inhibitor of activated STAT 1","termid":"PBO:0063848"}


id: PBO:0057950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3672","termid":"PBO:0057950"}


id: PBO:0002787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urease Ure2","termid":"PBO:0002787"}


id: PBO:0043203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"creatine kinase, mitochondrial 1A","termid":"PBO:0043203"}


id: MONDO:0010694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nystagmus","termid":"MONDO:0005712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"nystagmus, myoclonic","secondary_identifiers":["MEDGEN:326918","MESH:C564088","OMIM:310800","UMLS:C1839579"],"synonyms":[{"name":"myoclonic nystagmus","type":"related"},{"name":"nystagmus, myoclonic","type":"exact"}],"termid":"MONDO:0010694","xrefs":{"Monarch":{"xref_id":"0010694"}}}


id: GO:0003143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the embryonic heart tube are generated and organized. The embryonic heart tube is an epithelial tube that will give rise to the mature heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"epithelial tube morphogenesis","termid":"GO:0060562"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"},{"relation_name":"part_of","term_name":"embryonic heart tube development","termid":"GO:0035050"},{"relation_name":"part_of","term_name":"embryonic organ morphogenesis","termid":"GO:0048562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic heart tube morphogenesis","termid":"GO:0003143"}


id: PBO:0068168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 475","termid":"PBO:0068168"}


id: PBO:0029935
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_spheroid_cell","termid":"PBO:0029935"}


id: PBO:0061567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal asparagine amidase pseudogene 1","termid":"PBO:0061567"}


id: PBO:0042417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 27 pseudogene 1","termid":"PBO:0042417"}


id: GO:0008859
data:
  {"annotated_genes":["SJAG_06586"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113928],"is_not":false,"summary":null,"term":"GO:0008859"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: RNA + H2O = 5'-phosphomononucleotides. Cleaves RNA in the 3' to 5' direction.","definition_xrefs":["EC:3.1.13.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-5'-RNA exonuclease activity","termid":"GO:0000175"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0004527","GO:0016787","GO:0016788","GO:0003824","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"exoribonuclease II activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.1.13.1-RXN"],"synonyms":[{"name":"5'-exoribonuclease activity","type":"related"},{"name":"BN ribonuclease activity","type":"related"},{"name":"Escherichia coli exo-RNase II","type":"related"},{"name":"RNase II","type":"related"},{"name":"RNase II activity","type":"exact"},{"name":"ribonuclease II activity","type":"related"},{"name":"ribonuclease Q","type":"related"}],"termid":"GO:0008859","terms_by_termid":{"GO:0008859":null}}


id: PBO:0071645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 9","termid":"PBO:0071645"}


id: MONDO:0012669
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Legius syndrome, also known as NF1-like syndrome, is a rare, genetic skin pigmentation disorder characterized by multiple cafC)-au-lait macules with or without axillary or inguinal freckling.","definition_xrefs":["Orphanet:137605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"Noonan syndrome and Noonan-related syndrome","termid":"MONDO:0020297"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005267"],"is_obsolete":false,"name":"Legius syndrome","secondary_identifiers":["GARD:10714","ICD9:709.09","MESH:C548032","SCTID:703541007","MEDGEN:370709","DOID:0070484","icd11.foundation:1025118245","NCIT:C176941","OMIM:611431","UMLS:C1969623"],"synonyms":[{"name":"Legius syndrome","type":"exact"},{"name":"NF1-like syndrome","type":"exact"},{"name":"neurofibromatosis 1-like syndrome","type":"exact"},{"name":"neurofibromatosis type 1 like syndrome","type":"related"},{"name":"neurofibromatosis type 1-like syndrome","type":"related"}],"termid":"MONDO:0012669","xrefs":{"Monarch":{"xref_id":"0012669"}}}


id: PBO:0063073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAPLN antisense RNA 1","termid":"PBO:0063073"}


id: GO:0098623
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: SeO3(2-) + 3NADPH + 5H+ = H2Se + 3NADP+ + 3H2O.","definition_xrefs":["PMID:1321713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"selenite reductase activity","secondary_identifiers":["Reactome:R-HSA-2408558"],"termid":"GO:0098623"}


id: GO:0044439
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a peroxisome, a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisomal part (obsolete GO:0044439)","synonyms":[{"name":"peroxisome component","type":"exact"}],"termid":"GO:0044439"}


id: GO:1900894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tridecane metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of tridecane metabolic process","termid":"GO:1900893"},{"relation_name":"negatively_regulates","term_name":"tridecane metabolic process","termid":"GO:1900631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tridecane metabolic process","synonyms":[{"name":"down regulation of tridecane metabolic process","type":"exact"},{"name":"down regulation of tridecane metabolism","type":"related"},{"name":"down-regulation of tridecane metabolic process","type":"exact"},{"name":"down-regulation of tridecane metabolism","type":"related"},{"name":"downregulation of tridecane metabolic process","type":"exact"},{"name":"downregulation of tridecane metabolism","type":"related"},{"name":"inhibition of tridecane metabolic process","type":"narrow"},{"name":"inhibition of tridecane metabolism","type":"narrow"},{"name":"negative regulation of tridecane metabolism","type":"related"}],"termid":"GO:1900894"}


id: PBO:0051318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR9-2 (pseudogene)","termid":"PBO:0051318"}


id: GO:0102007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + an N-acyl-L-homoserine lactone = H+ + an N-acyl-L-homoserine.","definition_xrefs":["EC:3.1.1.81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactonohydrolase activity","termid":"GO:0046573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acyl-L-homoserine-lactone lactonohydrolase activity","secondary_identifiers":["RHEA:22576","Reactome:R-HSA-9756177","Reactome:R-HSA-9756150","Reactome:R-HSA-9756136","Reactome:R-HSA-8932633","MetaCyc:3.1.1.81-RXN"],"termid":"GO:0102007"}


id: PBO:0063951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolactin induced protein","termid":"PBO:0063951"}


id: PBO:0078220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 10-1","termid":"PBO:0078220"}


id: PR:O14205
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Golgi phosphoprotein 3-like that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00600","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 74 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5D6.13","secondary_identifiers":["UniProtKB:O14205"],"synonyms":[{"name":"Spom972h-GOLPH3L","type":"exact"}],"termid":"PR:O14205"}


id: GO:0150091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a synapse between a multiple synapse bouton and two or more dendritic spines protruding either from a single dendrite or from multiple dendrites.","definition_xrefs":["GOC:aruk","PMID:24487234","PMID:7482800","PMID:10586883","PMID:8366344","PMID:11248111","GOC:bc","PMID:22028887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple spine synapse organization","termid":"GO:0150089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multiple spine synapse organization, multiple dendrites","termid":"GO:0150091"}


id: PBO:0069689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 968, pseudogene","termid":"PBO:0069689"}


id: GO:0034296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which zygospores are formed. Zygospores are characteristic of the zygomycete fungi (phylum Zygomycota) thick-walled and darkly colored, and usually heavily ornamented as well, with many spines or ridges. It is formed between two specialized organs called suspensors, which are themselves usually heavily ornamented, one from each mating partner. The zygospore forms between them and then breaks away.","definition_xrefs":["GOC:ds","GOC:mah","PMID:21858438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"zygospore formation","termid":"GO:0034296"}


id: PBO:0061643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUDT19 pseudogene 1","termid":"PBO:0061643"}


id: MONDO:0011320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extremely rare syndrome characterized by the association of radioulnar synostosis with microcephaly, scoliosis, short stature and intellectual deficit.","definition_xrefs":["Orphanet:3268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radioulnar synostosis-microcephaly-scoliosis syndrome","secondary_identifiers":["GARD:394","OMIM:603438","UMLS:C1863881","MEDGEN:400399"],"synonyms":[{"name":"Giuffre-Tsukahara syndrome","type":"exact"},{"name":"Giuffré-Tsukahara syndrome","type":"exact"},{"name":"Tsukahara syndrome","type":"exact"},{"name":"Tsukahara syndrome of radioulnar synostosis, short stature, microcephaly, scoliosis, and intellectual disability","type":"related"},{"name":"Tsukahara syndrome of radioulnar synostosis, short stature, microcephaly, scoliosis, and mental retardation","type":"related"},{"name":"radioulnar synostosis with microcephaly, short stature, scoliosis, and intellectual disability","type":"related"},{"name":"radioulnar synostosis with microcephaly, short stature, scoliosis, and mental retardation","type":"related"}],"termid":"MONDO:0011320","xrefs":{"Monarch":{"xref_id":"0011320"}}}


id: MONDO:0022871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corpus callosum agenesis of blepharophimosis robin type","termid":"MONDO:0022871","xrefs":{"Monarch":{"xref_id":"0022871"}}}


id: GO:1901070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of guanosine-containing compounds (guanosines).","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleoside biosynthetic process","termid":"GO:0046129"},{"relation_name":"is_a","term_name":"guanosine-containing compound metabolic process","termid":"GO:1901068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"guanosine-containing compound biosynthetic process","synonyms":[{"name":"guanosine-containing compound anabolism","type":"exact"},{"name":"guanosine-containing compound biosynthesis","type":"exact"},{"name":"guanosine-containing compound formation","type":"exact"},{"name":"guanosine-containing compound synthesis","type":"exact"},{"name":"guanosines anabolism","type":"exact"},{"name":"guanosines biosynthesis","type":"exact"},{"name":"guanosines biosynthetic process","type":"exact"},{"name":"guanosines formation","type":"exact"},{"name":"guanosines synthesis","type":"exact"}],"termid":"GO:1901070"}


id: MONDO:0013956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic variant of Mendelian susceptibility to mycobacterial diseases characterized by a partial defect in the interferon (IFN)-gamma pathway, leading to mild mycobacterial infections.","definition_xrefs":["Orphanet:319595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to mycobacterial diseases","termid":"MONDO:0019146"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mendelian susceptibility to mycobacterial diseases due to partial STAT1 deficiency","secondary_identifiers":["UMLS:C4013950","OMIM:614892","DOID:0111945","MEDGEN:862387"],"synonyms":[{"name":"IMD31A","type":"related"},{"name":"MSMD due to partial STAT1 deficiency","type":"exact"},{"name":"MSMD due to partial signal transducer and activator of transcription 1 deficiency","type":"exact"},{"name":"Mendelian susceptibility to mycobacterial diseases due to partial signal transducer and activator of transcription 1 deficiency","type":"exact"},{"name":"STAT1 autosomal dominant mendelian susceptibility to mycobacterial diseases due to a partial deficiency","type":"exact"},{"name":"Stat1 deficiency, autosomal dominant","type":"related"},{"name":"autosomal dominant mendelian susceptibility to mycobacterial diseases due to a partial deficiency caused by mutation in STAT1","type":"exact"},{"name":"immunodeficiency 31A","type":"related"},{"name":"immunodeficiency 31A, Mycobacteriosis, autosomal dominant","type":"related"},{"name":"immunodeficiency type 31A","type":"exact"}],"termid":"MONDO:0013956","xrefs":{"Monarch":{"xref_id":"0013956"}}}


id: PBO:0081385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 225","termid":"PBO:0081385"}


id: GO:0033937
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of the beta-ketopyranosidic linkages of 3-deoxy-D-manno-2-octulosonate in capsular polysaccharides.","definition_xrefs":["EC:3.2.1.124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-deoxy-2-octulosonidase activity","secondary_identifiers":["MetaCyc:3.2.1.124-RXN"],"synonyms":[{"name":"2-keto-3-deoxyoctonate hydrolase activity","type":"related"},{"name":"capsular-polysaccharide 3-deoxy-D-manno-2-octulosonohydrolase activity","type":"related"},{"name":"octulofuranosylono hydrolase activity","type":"related"},{"name":"octulopyranosylonohydrolase activity","type":"related"},{"name":"octulosylono hydrolase activity","type":"related"}],"termid":"GO:0033937"}


id: PBO:0053497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 475","termid":"PBO:0053497"}


id: PBO:0076527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 40","termid":"PBO:0076527"}


id: PBO:0066351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA terminal phosphate cyclase like 1","termid":"PBO:0066351"}


id: PBO:0054065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1412","termid":"PBO:0054065"}


id: GO:0003414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structures of a chondrocyte that will contribute to bone development are generated and organized.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chondrocyte morphogenesis","termid":"GO:0090171"},{"relation_name":"part_of","term_name":"chondrocyte development involved in endochondral bone morphogenesis","termid":"GO:0003433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chondrocyte morphogenesis involved in endochondral bone morphogenesis","termid":"GO:0003414"}


id: PR:O59700
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mfs3 gene.","definition_xrefs":["UniProtKB:O59700","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C36.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36.03c","synonyms":[{"name":"Spom972h-mfs3","type":"exact"}],"termid":"PR:O59700"}


id: PBO:0017554
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bypass of Yeast Ras","termid":"PBO:0017554"}


id: GO:0017116
data:
  {"annotated_genes":["SJAG_04210","SJAG_02822","SJAG_02348","SJAG_04183","SJAG_02199","SJAG_00884","SJAG_03780","SJAG_01762","SJAG_00857","SJAG_01354"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91452,94547,103668,109722,112023,114610],"is_not":false,"summary":null,"term":"GO:0017116"},{"annotations":[105922,108577,114782,106741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990518"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O = ADP + phosphate, in the presence of single-stranded DNA; drives the unwinding of a DNA helix.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA helicase activity","termid":"GO:0003678"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00857":null,"SJAG_00884":null,"SJAG_01354":null,"SJAG_01762":null,"SJAG_02199":null,"SJAG_02348":null,"SJAG_02822":null,"SJAG_03780":null,"SJAG_04183":null,"SJAG_04210":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"single-stranded DNA helicase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0043142"],"synonyms":[{"name":"single-stranded DNA-dependent ATP-dependent DNA helicase activity","type":"exact"},{"name":"single-stranded DNA-dependent ATPase activity","type":"exact"},{"name":"ssDNA-dependent ATP-dependent DNA helicase activity","type":"exact"},{"name":"ssDNA-dependent ATPase activity","type":"exact"}],"termid":"GO:0017116","terms_by_termid":{"GO:0017116":null,"GO:1990518":null}}


id: GO:0102874
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-16:0-2-18:2-digalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-16:0-2-18:3-digalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz","PMID:17064923"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-16:0-2-18:2-digalactosyldiacylglycerol desaturase activity (obsolete GO:0102874)","termid":"GO:0102874"}


id: PBO:0001607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"esterase/lipase (predicted)","termid":"PBO:0001607"}


id: PBO:0088922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase Pgm1","termid":"PBO:0088922"}


id: GO:0090045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of deacetylase activity, the catalysis of the hydrolysis of an acetyl group or groups from a substrate molecule.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catalytic activity","termid":"GO:0043085"},{"relation_name":"is_a","term_name":"regulation of deacetylase activity","termid":"GO:0150065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of deacetylase activity","termid":"GO:0090045"}


id: PATO:0001016
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001016 absolute occurence value (obsolete PATO:0001016)","termid":"PATO:0001016"}


id: PBO:0040329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 1 pseudogene 4","termid":"PBO:0040329"}


id: PBO:0013113
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ortholog of G4-Associated protein","termid":"PBO:0013113"}


id: GO:0032415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the activity of a sodium:hydrogen antiporter, which catalyzes the reaction: Na+(out) + H+(in) = Na+(in) + H+(out).","definition_xrefs":["GOC:mah","GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of sodium:proton antiporter activity (obsolete GO:0032415)","synonyms":[{"name":"regulation of sodium:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0032415"}


id: GO:0009834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of inextensible cellulose- and pectin-containing cell walls that are formed between the plasma membrane and primary cell wall after cell expansion is complete. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall biogenesis","termid":"GO:0009832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0044085"],"is_obsolete":false,"name":"plant-type secondary cell wall biogenesis","synonyms":[{"name":"cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"secondary cell wall anabolism","type":"broad"},{"name":"secondary cell wall biogenesis","type":"exact"},{"name":"secondary cell wall biosynthetic process","type":"broad"},{"name":"secondary cell wall formation","type":"broad"},{"name":"secondary cell wall synthesis","type":"broad"}],"termid":"GO:0009834"}


id: PBO:0046426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPH receptor B1","termid":"PBO:0046426"}


id: PBO:0076966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGIF2-RAB5IF readthrough","termid":"PBO:0076966"}


id: PBO:0055242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2669","termid":"PBO:0055242"}


id: PR:Q9UTA0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC27E2.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTA0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C27E2.11c, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.11c","synonyms":[{"name":"Spom972h-SPAC27E2.11c","type":"exact"}],"termid":"PR:Q9UTA0"}


id: SO:0000121
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A single stranded oligo used for polymerase chain reaction.","direct_ancestors":[{"relation_name":"has_quality","term_name":"forward","termid":"SO:0001030"},{"relation_name":"is_a","term_name":"primer","termid":"SO:0000112"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forward_primer","synonyms":[{"name":"DNA forward primer","type":"exact"},{"name":"forward DNA primer","type":"exact"},{"name":"forward primer","type":"exact"},{"name":"forward primer oligo","type":"exact"},{"name":"forward primer oligonucleotide","type":"exact"},{"name":"forward primer polynucleotide","type":"exact"},{"name":"forward primer sequence","type":"exact"}],"termid":"SO:0000121"}


id: GO:0008466
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + glycogenin = UDP + glucosylglycogenin. This first reaction is a self glucosylation. Further UDP-glucose goups are added to the [1,4-alpha-D-glucosyl](n) group of glycogenin until a length of about 5-13 residues.","definition_xrefs":["EC:2.4.1.186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"glycogenin glucosyltransferase activity","secondary_identifiers":["GO:0047210","Reactome:R-HSA-3322003","Reactome:R-HSA-3322025","Reactome:R-HSA-3814838","Reactome:R-HSA-3322014","Reactome:R-HSA-3322019"],"synonyms":[{"name":"1,4alpha-glucan-protein synthase (UDP-forming) activity","type":"exact"},{"name":"UDP-alpha-D-glucose:glycogenin alpha-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:glycogenin glucosyltransferase activity","type":"related"},{"name":"alpha-1,4-glucan-protein synthase (UDP-forming) activity","type":"exact"},{"name":"glycogenin activity","type":"related"},{"name":"priming glucosyltransferase activity","type":"related"}],"termid":"GO:0008466"}


id: PBO:0091664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane mannan endo-1,6-alpha-mannosidase Dfg502","termid":"PBO:0091664"}


id: FYPO:0007642
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the dimethylation of lysine at position 9 of histone H3 occurs to a lower extent than normal at ribosomal DNA during G0 phase.","definition_xrefs":["PomBase:mah","PMID:27738016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation during G0","termid":"FYPO:0007641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at rDNA during G0","synonyms":[{"name":"decreased histone H3 K9 dimethylation at rDNA during G0","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at rDNA during cell quiescence","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at rDNA during quiescence","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at ribosomal DNA during G0","type":"exact"},{"name":"decreased histone H3K9 dimethylation at rDNA during G0","type":"exact"},{"name":"decreased histone H3K9me2 dimethylation at rDNA during G0","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at rDNA during G0","type":"exact"}],"termid":"FYPO:0007642"}


id: MONDO:0013794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial thrombocytosis in which the cause of the disease is a mutation in the JAK2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"essential thrombocythemia","termid":"MONDO:0005029"},{"relation_name":"is_a","term_name":"familial thrombocytosis","termid":"MONDO:0019111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocythemia 3","secondary_identifiers":["OMIM:614521","UMLS:C3281125","MEDGEN:482755"],"synonyms":[{"name":"JAK2 familial thrombocytosis","type":"exact"},{"name":"THCYT3","type":"related"},{"name":"familial thrombocytosis caused by mutation in JAK2","type":"exact"},{"name":"thrombocythemia 3","type":"exact"},{"name":"thrombocythemia 3, autosomal dominant, somatic mutation","type":"exact"},{"name":"thrombocythemia type 3","type":"exact"},{"name":"thrombocytosis 3","type":"related"}],"termid":"MONDO:0013794","xrefs":{"Monarch":{"xref_id":"0013794"}}}


id: PBO:0067056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 77, pseudogene","termid":"PBO:0067056"}


id: PBO:0068809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 46, pseudogene","termid":"PBO:0068809"}


id: PBO:0090557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine-N2-)-methyltransferase catalytic subunit Trm11","termid":"PBO:0090557"}


id: PBO:0052039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JunB proto-oncogene, AP-1 transcription factor subunit","termid":"PBO:0052039"}


id: PBO:0087156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA helicase in the DEAH-box family; functions in both RNA polymerase I and polymerase II transcript metabolism; catalyzes removal of U2, U5, and U6 snRNPs from the postsplicing lariat-intron ribonucleoprotein complex; required for efficient biogenesis of both small- and large-subunit rRNAs; acts with Sqs1p to promote 20S to 18S rRNA processing catalyzed by endonuclease Nob1p","termid":"PBO:0087156"}


id: MONDO:0800395
data:
  {"annotated_genes":["SJAG_04529"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010828"}]},"cv_name":"mondo","definition":"An inherited retinopathy caused by variants in the PRPF31 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04529":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"PRPF31-related retinopathy","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0800395","terms_by_termid":{"MONDO:0010828":null},"xrefs":{"Monarch":{"xref_id":"0800395"}}}


id: SO:0000382
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A group II intron that recognizes IBS1/EBS1 and IBS2/EBS2 for the 5-prime exon and IBS3/EBS3 for the 3-prime exon.","definition_xrefs":["PMID:20463000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"group_II_intron","termid":"SO:0000603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"group_IIB_intron","synonyms":[{"name":"group IIB intron","type":"exact"}],"termid":"SO:0000382"}


id: PBO:0050631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor family, X-linked 1","termid":"PBO:0050631"}


id: PBO:0053184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LENG8 antisense RNA 1","termid":"PBO:0053184"}


id: GO:0052590
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: sn-glycerol 3-phosphate + a ubiquinone = glycerone phosphate + a ubiquinol.","definition_xrefs":["MetaCyc:RXN0-5260"],"gene_count":0,"genotype_count":0,"name":"obsolete sn-glycerol-3-phosphate:ubiquinone oxidoreductase activity (obsolete GO:0052590)","termid":"GO:0052590"}


id: SO:0000938
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_feature","termid":"SO:0000301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","synonyms":[{"name":"vertebrate immunoglobulin T cell receptor rearranged gene cluster","type":"exact"}],"termid":"SO:0000938"}


id: PBO:0057890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3194","termid":"PBO:0057890"}


id: FYPO:0007798
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to one or more actin filaments occurs to a greater extent than normal. The affected protein may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein-protein interaction","termid":"FYPO:0001571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000702","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"increased actin filament binding","synonyms":[{"name":"increased F-actin binding","type":"exact"},{"name":"increased filamentous actin binding","type":"related"},{"name":"increased protein-protein interaction with actin filament","type":"exact"}],"termid":"FYPO:0007798"}


id: PBO:0018246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus-end directed microtubule motor, kinesin Pkl1","termid":"PBO:0018246"}


id: MONDO:0004207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from the pulmonary artery It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:C5373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"},{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"},{"relation_name":"is_a","term_name":"angiosarcoma","termid":"MONDO:0016982"},{"relation_name":"is_a","term_name":"great vessel cancer","termid":"MONDO:0040676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pulmonary artery leiomyosarcoma","secondary_identifiers":["MEDGEN:233372","UMLS:C1335572","DOID:7389"],"synonyms":[{"name":"leiomyosarcoma of pulmonary artery","type":"exact"},{"name":"leiomyosarcoma of the pulmonary artery","type":"exact"},{"name":"pulmonary artery leiomyosarcoma","type":"exact"}],"termid":"MONDO:0004207","xrefs":{"Monarch":{"xref_id":"0004207"}}}


id: GO:0039018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the nephrostome over time, from its formation to the mature structure. The nephrostome is the opening of the pronephros into the body cavity.","definition_xrefs":["PMID:15647339","PMID:14686690","XAO:0000062","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephrostome development","termid":"GO:0039018"}


id: PBO:0046998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A1","termid":"PBO:0046998"}


id: MONDO:0020231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cardiac disease with cataract (obsolete MONDO:0020231)","secondary_identifiers":["Orphanet:98647"],"termid":"MONDO:0020231","xrefs":{"Monarch":{"xref_id":"0020231"}}}


id: PR:Q10210
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swc3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWR1 complex subunit swc3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.02c","synonyms":[{"name":"Spom972h-swc3","type":"exact"}],"termid":"PR:Q10210"}


id: PBO:0055598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3034","termid":"PBO:0055598"}


id: PBO:0054991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2405","termid":"PBO:0054991"}


id: GO:0015625
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + ferric-hydroxamate(out) = ADP + phosphate + ferric-hydroxamate(in).","definition_xrefs":["PMID:1551849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron chelate transmembrane transporter activity","termid":"GO:0015603"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ABC-type ferric hydroxamate transporter activity","secondary_identifiers":["GO:0015622","GO:0015623","GO:0015409","MetaCyc:ABC-11-RXN","GO:0102026","EC:7.2.2.16"],"synonyms":[{"name":"ATP-dependent ferric-hydroxamate transmembrane transporter activity","type":"exact"},{"name":"ATP-dependent iron-chelate transporter activity","type":"broad"},{"name":"ATPase-coupled ferric-hydroxamate transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled iron-chelate transporter activity","type":"broad"},{"name":"ferric-hydroxamate ABC transporter","type":"narrow"},{"name":"ferric-hydroxamate porter activity","type":"broad"},{"name":"ferric-hydroxamate transmembrane transporter activity","type":"broad"},{"name":"ferric-hydroxamate-transporting ATPase activity","type":"exact"},{"name":"iron-chelate-transporting ATPase activity","type":"broad"}],"termid":"GO:0015625"}


id: MONDO:0004319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An undifferentiated small cell carcinoma that arises from the ovary and is associated with hypercalcemia. Electron microscopic studies show neurosecretory granules are either absent or, when present, are in small numbers.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian small cell carcinoma","termid":"MONDO:0003795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"hypercalcemic type ovarian small cell carcinoma","secondary_identifiers":["UMLS:C1518736","MEDGEN:275294","NCIT:C40439","DOID:7651"],"synonyms":[{"name":"SCCOHT","type":"exact"},{"name":"ovarian small cell carcinoma, hypercalcemic type","type":"exact"}],"termid":"MONDO:0004319","xrefs":{"Monarch":{"xref_id":"0004319"}}}


id: FYPO:0006972
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of S-adenosyl-L-cysteine measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular S-adenosyl-L-cysteine level","synonyms":[{"name":"decreased cellular S-adenosyl-L-cysteine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular S-adenosyl-L-cysteine level during vegetative growth","type":"exact"},{"name":"decreased level of S-adenosyl-L-cysteine in cell","type":"exact"},{"name":"reduced cellular S-adenosyl-L-cysteine level","type":"exact"}],"termid":"FYPO:0006972"}


id: PBO:0059983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 3","termid":"PBO:0059983"}


id: PBO:0076939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIP11 divergent transcript","termid":"PBO:0076939"}


id: FYPO:0007880
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein degradation is normal (i.e. indistinguishable from wild type) during a cellular response to methyl methanesulfonate. Protein degradation, also known as protein catabolism, is any metabolic process that results in the destruction of the native, active configuration of a protein, with or without the hydrolysis of peptide bonds.","definition_xrefs":["GO:0030163","PMID:34608864","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein degradation during vegetative growth","termid":"FYPO:0002800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein degradation during cellular response to methyl methanesulfonate","synonyms":[{"name":"normal protein breakdown during cellular response to methyl methanesulfonate","type":"exact"},{"name":"normal protein catabolic process during cellular response to methyl methanesulfonate","type":"exact"},{"name":"normal protein catabolism during cellular response to methyl methanesulfonate","type":"exact"},{"name":"normal protein degradation during cellular response to MMS","type":"exact"},{"name":"normal protein degradation during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"normal protein degradation during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"}],"termid":"FYPO:0007880"}


id: GO:0005184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of a neuropeptide hormone, any peptide hormone that acts in the central nervous system. A neuropeptide is any of several types of molecules found in brain tissue, composed of short chains of amino acids; they include endorphins, enkephalins, vasopressin, and others. They are often localized in axon terminals at synapses and are classified as putative neurotransmitters, although some are also hormones.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone activity","termid":"GO:0005179"},{"relation_name":"is_a","term_name":"neuropeptide activity","termid":"GO:0160041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0005488","GO:0005515","GO:0140677"],"is_obsolete":false,"name":"neuropeptide hormone activity","secondary_identifiers":["Wikipedia:Neurohormone"],"synonyms":[{"name":"neurohormone","type":"exact"}],"termid":"GO:0005184"}


id: MONDO:0003226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Nelson syndrome (obsolete MONDO:0003226)","termid":"MONDO:0003226","xrefs":{"Monarch":{"xref_id":"0003226"}}}


id: GO:0002329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a pre-B cell. Pre-B cells follow the pro-B cell stage of immature B cell differentiation and undergo rearrangement of heavy chain V, D, and J gene segments.","definition_xrefs":["ISBN:0781735149","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immature B cell differentiation","termid":"GO:0002327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pre-B cell differentiation","synonyms":[{"name":"pre-B cell development","type":"related"},{"name":"pre-B lymphocyte differentiation","type":"exact"}],"termid":"GO:0002329"}


id: PBO:0000841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTP synthase Cts1 (predicted)","termid":"PBO:0000841"}


id: GO:0060376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of mast cell differentiation, the process in which a relatively unspecialized myeloid precursor cell acquires the specialized features of a mast cell. A mast cell is a cell that is found in almost all tissues containing numerous basophilic granules and capable of releasing large amounts of histamine and heparin upon activation.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte differentiation","termid":"GO:0002763"},{"relation_name":"is_a","term_name":"regulation of mast cell differentiation","termid":"GO:0060375"},{"relation_name":"positively_regulates","term_name":"mast cell differentiation","termid":"GO:0060374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mast cell differentiation","termid":"GO:0060376"}


id: MOD:01816
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to a 2'-hydroxy-L-tryptophan.","definition_xrefs":["RESID:AA0542","PubMed:11714714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated tryptophan","termid":"MOD:01622"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2'-hydroxy-L-tryptophan","synonyms":[{"name":"(2S)-2-amino-3-(2-hydroxy-1H-indol-3-yl)propanoic acid","type":"exact"},{"name":"2'-hydroxy-L-tryptophan","type":"exact"},{"name":"2-azanyl-3-(2-hydroxy-1H-indol-3-yl)propanoic acid","type":"exact"},{"name":"2-hydroxy-L-tryptophan","type":"exact"},{"name":"2-hydroxy-tryptophan","type":"exact"}],"termid":"MOD:01816"}


id: PBO:0073386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain containing 2, histone lysine methyltransferase","termid":"PBO:0073386"}


id: PBO:0057633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1208","termid":"PBO:0057633"}


id: PR:Q9UTE8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ies6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTE8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin-remodeling complex subunit ies6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.04c","synonyms":[{"name":"Spom972h-ies6","type":"exact"}],"termid":"PR:Q9UTE8"}


id: GO:0004120
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nucleoside cyclic phosphate + H2O = nucleoside phosphate. This reaction is the hydrolysis of bonds in a cyclic nucleotide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete photoreceptor cyclic-nucleotide phosphodiesterase activity (obsolete GO:0004120)","termid":"GO:0004120"}


id: PBO:0050655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 90 alpha family class B member 5, pseudogene","termid":"PBO:0050655"}


id: CHEBI:17306
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maltose","termid":"CHEBI:17306"}


id: MONDO:0020273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disease with potential neoplastic degeneration associated with ocular features (obsolete MONDO:0020273)","secondary_identifiers":["Orphanet:98703"],"termid":"MONDO:0020273","xrefs":{"Monarch":{"xref_id":"0020273"}}}


id: PBO:0065104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cAMP-dependent type II regulatory subunit beta","termid":"PBO:0065104"}


id: PBO:0052051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KAT8 regulatory NSL complex subunit 1 like","termid":"PBO:0052051"}


id: MONDO:0019256
data:
  {"annotated_genes":["SJAG_03509","SJAG_01474","SJAG_03024","SJAG_04810","SJAG_04865","SJAG_03018","SJAG_02855","SJAG_00717"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[85546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008974"},{"annotations":[86237,86238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009849"},{"annotations":[86105,86106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011816"},{"annotations":[84561,84560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012481"},{"annotations":[85277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014793"},{"annotations":[86704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010035"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of sterol metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"steroid metabolism disease","termid":"MONDO:0045012"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00717":null,"SJAG_01474":null,"SJAG_02855":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03509":null,"SJAG_04810":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"sterol metabolism disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18981","UMLS:C5681277","MEDGEN:1842986","Orphanet:79226"],"synonyms":[{"name":"inborn error of sterol metabolic process","type":"exact"},{"name":"inborn sterol metabolic process disorder","type":"exact"},{"name":"rare inborn error of sterol metabolic process","type":"exact"}],"termid":"MONDO:0019256","terms_by_termid":{"MONDO:0008974":null,"MONDO:0009849":null,"MONDO:0010035":null,"MONDO:0010621":null,"MONDO:0011816":null,"MONDO:0012481":null,"MONDO:0014793":null},"xrefs":{"Monarch":{"xref_id":"0019256"}}}


id: MONDO:0020319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute myeloblastic leukemia without maturation (obsolete MONDO:0020319)","termid":"MONDO:0020319","xrefs":{"Monarch":{"xref_id":"0020319"}}}


id: MONDO:0019565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary von Willebrand disease (VWD) is a hereditary bleeding disorder caused by a genetic anomaly leading to quantitative, structural or functional abnormalities of the Willebrand factor (von Willebrand factor; VWF). Two major groups of VWF deficiency have been defined: quantitative and partial (type 1) or total (type 3), and qualitative (type 2) with several subtypes (2A, 2B, 2M, 2N).","definition_xrefs":["Orphanet:903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"},{"relation_name":"is_a","term_name":"von Willebrand disease (hereditary or acquired)","termid":"MONDO:0024574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hereditary von Willebrand disease","secondary_identifiers":["MESH:C531844","UMLS:C5703318","ICD9:286.4","DOID:12531","icd11.foundation:2112021600","GARD:7867","MEDGEN:1814986","SCTID:234446004","MedDRA:10047715"],"synonyms":[{"name":"congenital von willebrand disease","type":"related"},{"name":"congenital von willebrand's disease","type":"exact"},{"name":"hereditary von Willebrand disease","type":"exact"},{"name":"hereditary von Willebrand disease (hereditary or acquired)","type":"exact"},{"name":"vascular haemophilia","type":"broad"},{"name":"vascular hemophilia","type":"broad"},{"name":"vascular pseudohemophilia","type":"exact"},{"name":"von Willebrand disease","type":"broad"},{"name":"von Willebrand disorder","type":"broad"},{"name":"von Willebrand's disease","type":"related"},{"name":"von Willebrand's-Jurgens' disease","type":"broad"},{"name":"von Willebrand-Jrgens disease","type":"exact"},{"name":"von Willebrand-Jurgens disease","type":"broad"}],"termid":"MONDO:0019565","xrefs":{"Monarch":{"xref_id":"0019565"}}}


id: PBO:0054372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1766","termid":"PBO:0054372"}


id: GO:1902639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving propan-2-ol.","definition_xrefs":["GOC:mengo_curators","PMID:16346237","GO_REF:0000068","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"},{"relation_name":"is_a","term_name":"fatty alcohol metabolic process","termid":"GO:1903173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"propan-2-ol metabolic process","synonyms":[{"name":"Isopropanol metabolic process","type":"exact"},{"name":"Isopropyl alcohol metabolic process","type":"exact"},{"name":"propan-2-ol metabolism","type":"exact"}],"termid":"GO:1902639"}


id: GO:0046050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of UMP, uridine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside monophosphate catabolic process","termid":"GO:0009175"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"UMP metabolic process","termid":"GO:0046049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"UMP catabolic process","synonyms":[{"name":"UMP breakdown","type":"exact"},{"name":"UMP catabolism","type":"exact"},{"name":"UMP degradation","type":"exact"}],"termid":"GO:0046050"}


id: PBO:0017670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Rna15","termid":"PBO:0017670"}


id: PBO:0046286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMAP like 4","termid":"PBO:0046286"}


id: GO:0014720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within tonic skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The tonic skeletal muscle is characterized by long lasting contractile responses and high resistance to fatigue.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voluntary skeletal muscle contraction","termid":"GO:0003010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tonic skeletal muscle contraction","termid":"GO:0014720"}


id: FYPO:0004273
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of ascospore release from an ascus is decreased.","definition_xrefs":["GO:0071998","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ascospore release from ascus","termid":"FYPO:0004272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"decreased ascospore release from ascus","synonyms":[{"name":"reduced ascospore release from ascus","type":"exact"}],"termid":"FYPO:0004273"}


id: PBO:0052311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA0586","termid":"PBO:0052311"}


id: MONDO:0020308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic neurological disorder characterized by childhood to mid-adolescence onset of frequent, brief, diurnal simple partial seizures which usually begin with visual hallucinations (e.g. phosphenes) and/or ictal blindness and may associate non visual seizures (such as deviation of the eyes, oculoclonic seizures), forced eyelid closure and blinking and sensory hallucinations. Post-ictal headache is common while impairment of consciousness is rare.","definition_xrefs":["Orphanet:98816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"self-limited childhood occipital epilepsy","termid":"MONDO:0007558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"childhood occipital visual epilepsy","secondary_identifiers":["GARD:19582","UMLS:C0393677","MEDGEN:581521"],"synonyms":[{"name":"COVE","type":"exact"},{"name":"benign childhood occipital epilepsy, Gastaut type","type":"exact"},{"name":"childhood occipital epilepsy (Gastaut type)","type":"exact"},{"name":"late-onset benign childhood occipital epilepsy","type":"exact"}],"termid":"MONDO:0020308","xrefs":{"Monarch":{"xref_id":"0020308"}}}


id: _global:translation_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X is translation of Y if Y is translated by ribosome to create X.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation_of","termid":"_global:translation_of"}


id: MONDO:0100063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare soft tissue neoplasm that displays a perivascular pattern of spindle-to-ovoid cell proliferation.","definition_xrefs":["PMID:15111311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pericytic neoplasm","termid":"MONDO:0002604"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pericytoma with t(7;12)","secondary_identifiers":["DOID:0080896"],"synonyms":[{"name":"Pericytoma t(7;12)","type":"exact"}],"termid":"MONDO:0100063","xrefs":{"Monarch":{"xref_id":"0100063"}}}


id: MONDO:0859273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"liver disease, severe congenital","secondary_identifiers":["MEDGEN:1823968","OMIM:619991","UMLS:C5774195"],"termid":"MONDO:0859273","xrefs":{"Monarch":{"xref_id":"0859273"}}}


id: PBO:0039817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor GTPase activating protein 1","termid":"PBO:0039817"}


id: PBO:0006189
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-not_during","termid":"PBO:0006189"}


id: PBO:0065094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKAG2 antisense RNA 1","termid":"PBO:0065094"}


id: GO:0000732
data:
  {"annotated_genes":["SJAG_02294"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100141],"is_not":false,"summary":null,"term":"GO:0000732"},{"annotations":[100143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902346"}]},"cv_name":"biological_process","definition":"The rejection of the broken 3' single-strand DNA molecule that formed heteroduplex DNA with its complement in an intact duplex DNA. The Watson-Crick base pairing in the original duplex is restored. The rejected 3' single-strand DNA molecule reanneals with its original complement to reform two intact duplex molecules.","definition_xrefs":["PMID:10357855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"DNA strand displacement","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"D-loop dissociation","type":"related"},{"name":"D-loop processing","type":"related"},{"name":"displacement loop dissociation","type":"related"},{"name":"displacement loop processing","type":"related"},{"name":"strand displacement","type":"exact"}],"termid":"GO:0000732","terms_by_termid":{"GO:0000732":null,"GO:1902346":null}}


id: PBO:0056351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP7 antisense RNA 1","termid":"PBO:0056351"}


id: PBO:0082204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-1,2-mannosyltransferase; responsible for addition of the first alpha-1,2-linked mannose to form the branches on the mannan backbone of oligosaccharides, localizes to an early Golgi compartment","termid":"PBO:0082204"}


id: MONDO:0013176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Weill-Marchesani syndrome","termid":"MONDO:0018096"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Weill-Marchesani 4 syndrome, recessive","secondary_identifiers":["MEDGEN:416383","MESH:C567710","OMIM:613195","Orphanet:363992","UMLS:C2750787","GARD:17579"],"synonyms":[{"name":"15q26.3 microdeletion syndrome","type":"exact"},{"name":"WMS4","type":"exact"},{"name":"Weill-Marchesani syndrome 4","type":"exact"},{"name":"Weill-Marchesani-like syndrome","type":"exact"},{"name":"ichthyosis-short stature-brachydactyly-microspherophakia syndrome","type":"exact"}],"termid":"MONDO:0013176","xrefs":{"Monarch":{"xref_id":"0013176"}}}


id: PBO:0062719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily Q member 1","termid":"PBO:0062719"}


id: PBO:0074588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 4","termid":"PBO:0074588"}


id: PBO:0042352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD86 molecule","termid":"PBO:0042352"}


id: FYPO:0007143
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 5'-deoxyribonuclease (pyrimidine dimer) activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal 5' deoxyribonuclease (pyrimidine dimer) activity","termid":"FYPO:0004028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0005447","FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0000002"],"is_obsolete":false,"name":"increased 5'-deoxyribonuclease (pyrimidine dimer) activity","termid":"FYPO:0007143"}


id: GO:0030245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellulose metabolic process","termid":"GO:0030243"},{"relation_name":"is_a","term_name":"beta-glucan catabolic process","termid":"GO:0051275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"cellulose catabolic process","secondary_identifiers":["GO:0016179"],"synonyms":[{"name":"cellulose breakdown","type":"exact"},{"name":"cellulose catabolism","type":"exact"},{"name":"cellulose degradation","type":"exact"}],"termid":"GO:0030245"}


id: PR:Q9P4X4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A beta-soluble NSF attachment protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01414","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicular-fusion protein sec17 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC959.02","secondary_identifiers":["UniProtKB:Q9P4X4"],"synonyms":[{"name":"Spom972h-NAPB","type":"exact"}],"termid":"PR:Q9P4X4"}


id: MONDO:0018702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A clinicopathologic variant of multicentric Castleman's disease characterized by thrombocytopenia, ascites (anasarca), microcytic anemia, myelofibrosis, renal dysfunction, and organomegaly","definition_xrefs":["PMID:23801135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune lymphoproliferative syndrome","termid":"MONDO:0017979"},{"relation_name":"is_a","term_name":"idiopathic multicentric Castleman disease","termid":"MONDO:0035838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Castleman-Kojima disease","secondary_identifiers":["Orphanet:457077","MEDGEN:1672503","GARD:21902","UMLS:C4552543"],"synonyms":[{"name":"TAFRO syndrome","type":"exact"},{"name":"thrombocytopenia-anasarca-fever-renal insufficiency-organomegaly syndrome","type":"exact"}],"termid":"MONDO:0018702","xrefs":{"Monarch":{"xref_id":"0018702"}}}


id: MONDO:0001002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pulmonary siderosis (obsolete MONDO:0001002)","termid":"MONDO:0001002","xrefs":{"Monarch":{"xref_id":"0001002"}}}


id: GO:0120326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Penetration by a symbiont into a host organism via an appressorium. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:krc","GOC:ach","PMID:22589729","PMID:14731267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont entry into host","termid":"GO:0044409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"appressorium-mediated entry into host","synonyms":[{"name":"appressorium-mediated host invasion","type":"exact"},{"name":"appressorium-mediated host penetration","type":"exact"},{"name":"appressorium-mediated invasion into host","type":"exact"},{"name":"appressorium-mediated penetration into host","type":"exact"}],"termid":"GO:0120326"}


id: PBO:0069835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1121, pseudogene","termid":"PBO:0069835"}


id: GO:0071745
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgA isotype and two identical immunoglobulin light chains, held together by disulfide bonds, and sometimes complexed with J chain or J chain and secretory component. An IgA immunoglobulin complex may be embedded in the plasma membrane or present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["ISBN:0781765196","PMID:16362985","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"IgA immunoglobulin complex","synonyms":[{"name":"IgA1 antibody","type":"narrow"},{"name":"IgA2 antibody","type":"narrow"}],"termid":"GO:0071745"}


id: PBO:0069807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1093, pseudogene","termid":"PBO:0069807"}


id: PBO:0087909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor for thiamine-regulated genes; required for expression of the two isoforms of pyruvate decarboxylase (PDC1 and PDC5) along with thiamine biosynthetic genes; binds a DNA sequence in the PDC5 promoter; mutant fails to grow on 2% glucose and thus is scored as inviable under standard conditions","termid":"PBO:0087909"}


id: PBO:0035759
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9K14_acetylation_during_vegetative_growth","termid":"PBO:0035759"}


id: PR:P0CS86
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1348.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CS86"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0494 membrane protein C1348.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1348.01","synonyms":[{"name":"Spom972h-SPBC1348.01","type":"exact"}],"termid":"PR:P0CS86"}


id: PBO:0074541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synuclein gamma","termid":"PBO:0074541"}


id: MONDO:0000216
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital bilateral aplasia of vas deferens (obsolete MONDO:0000216)","termid":"MONDO:0000216","xrefs":{"Monarch":{"xref_id":"0000216"}}}


id: PBO:0001776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear envelope protein Brr6/Brl1","termid":"PBO:0001776"}


id: PBO:0050973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon omega 1 pseudogene 18","termid":"PBO:0050973"}


id: GO:0008458
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-carnitine + octanoyl-CoA = CoA + O-octanoyl-(R)-carnitine.","definition_xrefs":["RHEA:17177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carnitine O-acyltransferase activity","termid":"GO:0016406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"carnitine O-octanoyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03779","MetaCyc:CARNITINE-O-OCTANOYLTRANSFERASE-RXN","EC:2.3.1.137","Reactome:R-HSA-390281"],"synonyms":[{"name":"carnitine medium-chain acyltransferase activity","type":"related"},{"name":"easily solubilized mitochondrial carnitine palmitoyltransferase","type":"narrow"},{"name":"medium-chain/long-chain carnitine acyltransferase activity","type":"related"},{"name":"octanoyl-CoA:L-carnitine O-octanoyltransferase activity","type":"related"},{"name":"overt mitochondrial carnitine palmitoyltransferase","type":"narrow"}],"termid":"GO:0008458"}


id: FYPO:0006966
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of acetyl-CoA measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular acetyl-CoA level","synonyms":[{"name":"increased acetyl-CoA accumulation","type":"related"},{"name":"increased cellular acetyl-CoA level during mitotic cell cycle","type":"related"},{"name":"increased cellular acetyl-CoA level during vegetative growth","type":"exact"}],"termid":"FYPO:0006966"}


id: GO:0141082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts the host reactive oxygen species (ROS)-mediated innate immune response by directly degrading host ROS. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:27825304","PMID:28288207","PMID:19684141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont defense to host-produced reactive oxygen species","termid":"GO:0052164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated detoxification of host-generated reactive oxygen species","secondary_identifiers":["Reactome:R-HSA-1222538"],"termid":"GO:0141082"}


id: GO:0061188
data:
  {"annotated_genes":["SJAG_02723"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106142],"is_not":false,"summary":null,"term":"GO:0061188"}]},"cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of ribosomal DNA heterochromatin formation.","definition_xrefs":["PMID:10388812","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of heterochromatin formation","termid":"GO:0031452"},{"relation_name":"is_a","term_name":"regulation of rDNA heterochromatin formation","termid":"GO:0061187"},{"relation_name":"negatively_regulates","term_name":"rDNA heterochromatin formation","termid":"GO:0000183"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02723":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006325","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of rDNA heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of chromatin silencing at rDNA","type":"broad"},{"name":"negative regulation of ribosomal DNA heterochromatin assembly","type":"exact"},{"name":"negative regulation of ribosomal DNA heterochromatin formation","type":"exact"}],"termid":"GO:0061188","terms_by_termid":{"GO:0061188":null}}


id: PBO:0050878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDI1 pseudogene 1","termid":"PBO:0050878"}


id: PBO:0058687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6815","termid":"PBO:0058687"}


id: PBO:0043368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clusterin","termid":"PBO:0043368"}


id: PBO:0052526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 41","termid":"PBO:0052526"}


id: PBO:0001856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aconitate hydratase (predicted)","termid":"PBO:0001856"}


id: PBO:0062865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase 3","termid":"PBO:0062865"}


id: PR:P78963
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein arginine N-methyltransferase 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10738:SF0","OMA:SCHPO03206"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine N-methyltransferase skb1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.11c","secondary_identifiers":["UniProtKB:P78963"],"synonyms":[{"name":"Spom972h-PRMT5","type":"exact"},{"name":"shk1 kinase-binding protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"type II PRMT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"type II protein arginine N-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78963"}


id: MONDO:0023164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pericarditis that is caused by an infection with a viral agent.","definition_xrefs":["NCIT:C128405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pericarditis","termid":"MONDO:0005904"},{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"viral pericarditis","secondary_identifiers":["MEDGEN:547113","UMLS:C0276139","icd11.foundation:624707101","SCTID:70189005"],"synonyms":[{"name":"Viral Pericarditis","type":"related"},{"name":"Viral pericarditis","type":"related"},{"name":"viral pericarditis","type":"exact"}],"termid":"MONDO:0023164","xrefs":{"Monarch":{"xref_id":"0023164"}}}


id: MONDO:0034923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inflammatory/autoimmune disorder involving the lacrimal system (obsolete MONDO:0034923)","secondary_identifiers":["Orphanet:519264"],"termid":"MONDO:0034923","xrefs":{"Monarch":{"xref_id":"0034923"}}}


id: PATO:0002477
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's disposition to breaks without significant deformation (strain) when subjected to stress.","definition_xrefs":["wikipedia:http://en.wikipedia.org/wiki/Brittleness"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brittle","termid":"PATO:0002477"}


id: MONDO:0035694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined immunodeficiency","termid":"MONDO:0015131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"combined immunodeficiency due to RELA haploinsufficiency","secondary_identifiers":["MEDGEN:1843216","UMLS:C5680288","GARD:22392","Orphanet:596759"],"synonyms":[{"name":"CID due to RELA haploinsufficiency","type":"exact"}],"termid":"MONDO:0035694","xrefs":{"Monarch":{"xref_id":"0035694"}}}


id: GO:2000053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of Wnt signaling pathway involved in dorsal/ventral axis specification.","definition_xrefs":["GOC:obol","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of Wnt signaling pathway involved in dorsal/ventral axis specification (obsolete GO:2000053)","synonyms":[{"name":"regulation of Wnt receptor signaling pathway involved in dorsal/ventral axis specification","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway involved in dorsal/ventral axis specification","type":"exact"},{"name":"regulation of Wnt-activated signaling pathway involved in dorsal/ventral axis specification","type":"exact"}],"termid":"GO:2000053"}


id: PBO:0076362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SZT2 subunit of KICSTOR complex","termid":"PBO:0076362"}


id: PBO:0074347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 6","termid":"PBO:0074347"}


id: GO:0098676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a virus improves the virulence of its host for that host's respective host. Common in but not limited to bacteriophages; also occurs in phage-bearing bacteria infecting plants or animals for example. Mechanisms include the expression of factors that modulate a bacterial adhesion to a host cell, spread through host tissues, production of exotoxins or provide protection against host immune defenses.","definition_xrefs":["PMID:10913072","VZ:3965","PMID:22919604","PMID:8658163","PMID:11553559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host process","termid":"GO:0044003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated modulation of host virulence","synonyms":[{"name":"modulation of host virulence by virus","type":"narrow"}],"termid":"GO:0098676"}


id: PBO:0051515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IKAROS family zinc finger 5","termid":"PBO:0051515"}


id: MONDO:0017606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete facial nerve palsy due to herpes zoster infection (obsolete MONDO:0017606)","termid":"MONDO:0017606","xrefs":{"Monarch":{"xref_id":"0017606"}}}


id: GO:0021868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The unequal mitotic division of a forebrain radial glial cell that gives rise to a radial glial cell and a ventricular zone cell.","definition_xrefs":["PMID:16226447","GOC:dph","GOC:cls","GO_REF:0000021","GOC:dgh","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete ventricular zone cell-producing asymmetric radial glial cell division in forebrain (obsolete GO:0021868)","termid":"GO:0021868"}


id: PBO:0079921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase","termid":"PBO:0079921"}


id: GO:0052896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + O2 + spermidine = 1,3-diaminopropane + 4-aminobutanal + H2O2.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete spermidine oxidase (propane-1,3-diamine-forming) activity (obsolete GO:0052896)","termid":"GO:0052896"}


id: GO:1900536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of glucose homeostasis.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of glucose homeostasis (obsolete GO:1900536)","synonyms":[{"name":"regulation of glucose homeostasis","type":"exact"}],"termid":"GO:1900536"}


id: MONDO:0021142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The acquired form of RMD. Although RMD most often is reported with autosomal dominant inheritance, some sporadic cases are found, and an association with other diseases such as myasthenia gravis has also been reported.","definition_xrefs":["doi:10.1002/mus.10156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rippling muscle disease","termid":"MONDO:0011634"},{"relation_name":"is_a","term_name":"acquired skeletal muscle disease","termid":"MONDO:0016105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"acquired rippling muscle disease","synonyms":[{"name":"acquired rippling muscle disease","type":"exact"},{"name":"sporadic rippling muscle disease","type":"exact"}],"termid":"MONDO:0021142","xrefs":{"Monarch":{"xref_id":"0021142"}}}


id: GO:0055123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the digestive system over time, from its formation to the mature structure. The digestive system is the entire structure in which digestion takes place. Digestion is all of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"digestive system development","termid":"GO:0055123"}


id: PBO:0051770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intracisternal A particle-promoted polypeptide","termid":"PBO:0051770"}


id: MONDO:0003850
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A slow-growing malignant bone tumor arising from the remnants of the notochord and occurring in the clivus. It is characterized by a lobulated growth pattern, myxoid stroma formation, the presence of physaliphorous cells and cartilage.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clivus chordoma","termid":"MONDO:0003849"},{"relation_name":"is_a","term_name":"chondroid chordoma","termid":"MONDO:0006145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"clivus chondroid chordoma","secondary_identifiers":["MEDGEN:232373","DOID:6313","NCIT:C5426","UMLS:C1333072"],"synonyms":[{"name":"chondroid chordoma of clivus","type":"exact"},{"name":"chondroid chordoma of clivus of occipital bone","type":"exact"},{"name":"chondroid chordoma of the clivus","type":"exact"},{"name":"clivus of occipital bone chondroid chordoma","type":"exact"}],"termid":"MONDO:0003850","xrefs":{"Monarch":{"xref_id":"0003850"}}}


id: MONDO:0013393
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal 7q11.23 microdeletion syndrome is a rare chromosomal anomaly characterized by epilepsy, neurodevelopmental disorder variably including developmental delays and intellectual disabilities of variable severity, learning disability and neurobehavioral abnormalities (autism spectrum disorder, hyperactivity, impulsivity, aggression, self-abusive behaviors, depression).","definition_xrefs":["Orphanet:254351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 7","termid":"MONDO:0016906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal 7q11.23 microdeletion syndrome","secondary_identifiers":["OMIM:613729","GARD:17218","MEDGEN:462349","UMLS:C3150999"],"synonyms":[{"name":"chromosome 7q11.23 deletion syndrome, distal, 1.2-MB","type":"related"},{"name":"chromosome 7q11.23 deletion syndrome, distal, 1.2mb","type":"exact"},{"name":"distal chromosome 7Q11.23 deletion syndrome","type":"related"},{"name":"distal del(7)(q11.23)","type":"exact"},{"name":"distal monosomy 7q11.23","type":"exact"}],"termid":"MONDO:0013393","xrefs":{"Monarch":{"xref_id":"0013393"}}}


id: MONDO:0005845
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the meninges and brain, generally secondary to an infectious cause. Pathogens may be bacterial, viral, fungal, or protozoan.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"encephalitis","termid":"MONDO:0019956"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meningoencephalitis","secondary_identifiers":["DOID:10554","EFO:0007364","MESH:D008590","NCIT:C34813","SCTID:7125002","MEDGEN:6301","UMLS:C0025309"],"termid":"MONDO:0005845","xrefs":{"Monarch":{"xref_id":"0005845"}}}


id: PBO:0060859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA-related kinase 4 pseudogene 1","termid":"PBO:0060859"}


id: PBO:0070513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 12","termid":"PBO:0070513"}


id: GO:0043932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation or growth of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone, involved in response to injury or other physical, physiological or environmental stress stimuli.","definition_xrefs":["GOC:mtg_mpo","GO_REF:0000034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ossification","termid":"GO:0001503"},{"relation_name":"part_of","term_name":"bone remodeling","termid":"GO:0046849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ossification involved in bone remodeling","synonyms":[{"name":"ossification involved in bone remodelling","type":"exact"}],"termid":"GO:0043932"}


id: PBO:0084293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Intracellular beta-1,3-endoglucanase; expression is induced during sporulation; may have a role in cortical actin cytoskeleton assembly; protein abundance increases in response to DNA replication stress","termid":"PBO:0084293"}


id: SO:0000716
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA that has the quality dicistronic.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"dicistronic","termid":"SO:0000879"},{"relation_name":"is_a","term_name":"dicistronic_transcript","termid":"SO:0000079"},{"relation_name":"is_a","term_name":"polycistronic_mRNA","termid":"SO:0000634"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dicistronic_mRNA","synonyms":[{"name":"dicistronic mRNA","type":"exact"},{"name":"dicistronic processed transcript","type":"related"}],"termid":"SO:0000716"}


id: PBO:0043061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chordin like 2","termid":"PBO:0043061"}


id: PR:Q9P7T6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC694.04c gene.","definition_xrefs":["UniProtKB:Q9P7T6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0160 protein C694.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC694.04c","synonyms":[{"name":"Spom972h-SPAC694.04c","type":"exact"}],"termid":"PR:Q9P7T6"}


id: SO:0000622
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An RNA polymerase III type 1 promoter with consensus sequence CAnnCCn.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_III_promoter_type_1","termid":"SO:0000617"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_box","synonyms":[{"name":"C-box","type":"exact"}],"termid":"SO:0000622"}


id: GO:1900809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fumigaclavine C, a fungal ergot alkaloid.","definition_xrefs":["GOC:di","PMID:26972831","GOC:TermGenie","PMID:23435153","PMID:15933009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ergot alkaloid biosynthetic process","termid":"GO:0035837"},{"relation_name":"is_a","term_name":"acetate ester biosynthetic process","termid":"GO:1900620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"fumigaclavine C biosynthetic process","secondary_identifiers":["GO:1900807"],"synonyms":[{"name":"fumigaclavine C anabolism","type":"exact"},{"name":"fumigaclavine C biosynthesis","type":"exact"},{"name":"fumigaclavine C formation","type":"exact"},{"name":"fumigaclavine C metabolic process","type":"broad"},{"name":"fumigaclavine C metabolism","type":"broad"},{"name":"fumigaclavine C synthesis","type":"exact"}],"termid":"GO:1900809"}


id: PBO:0031551
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_peptidase_activity","termid":"PBO:0031551"}


id: PBO:0034361
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-developmentally_induced_by","termid":"PBO:0034361"}


id: PATO:0001362
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's disposition to being easily damaged or destroyed.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragility","termid":"PATO:0001662"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile","termid":"PATO:0001362"}


id: PBO:0066941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 243","termid":"PBO:0066941"}


id: PR:O59852
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- inv1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invertase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC191.11","synonyms":[{"name":"Saccharase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-inv1","type":"exact"},{"name":"beta-fructofuranosidase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59852"}


id: PBO:0087445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit II of cytochrome c oxidase (Complex IV); Complex IV is the terminal member of the mitochondrial inner membrane electron transport chain; one of three mitochondrially-encoded subunits","termid":"PBO:0087445"}


id: PBO:0046289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMAP like 6","termid":"PBO:0046289"}


id: PBO:0040946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 17","termid":"PBO:0040946"}


id: MOD:01954
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-selenocysteine residue to dehydroalanine.","definition_xrefs":["PubMed:7947813","PubMed:22031445","RESID:AA0181","PubMed:10220322","PubMed:20805503","PubMed:1815586","ChEBI:17123","PubMed:2914619","PubMed:21420488","PubMed:1547888","PubMed:12781460","PubMed:8239649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-selenocysteine residue","termid":"MOD:01158"},{"relation_name":"is_a","term_name":"dehydroalanine","termid":"MOD:01168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydroalanine (Sec)","synonyms":[{"name":"2,3-didehydroalanine","type":"exact"},{"name":"2-aminoacrylic acid","type":"exact"},{"name":"2-aminopropenoic acid","type":"exact"},{"name":"4-methylidene-imidazole-5-one (MIO) active site","type":"exact"},{"name":"Dha","type":"exact"},{"name":"anhydroserine","type":"exact"},{"name":"dehydroalanine","type":"exact"}],"termid":"MOD:01954"}


id: GO:0043609
data:
  {"annotated_genes":["SJAG_02785"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88689],"is_not":false,"summary":null,"term":"GO:0043609"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of carbon utilization.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"regulates","term_name":"carbon utilization","termid":"GO:0015976"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of carbon utilization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043609","terms_by_termid":{"GO:0043609":null}}


id: PBO:0081779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 706","termid":"PBO:0081779"}


id: PBO:0082749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the RSC chromatin remodeling complex; RSC functions in transcriptional regulation and elongation, chromosome stability, and establishing sister chromatid cohesion; involved in telomere maintenance","termid":"PBO:0082749"}


id: PBO:0044685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dendrin","termid":"PBO:0044685"}


id: PBO:0051574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 17C","termid":"PBO:0051574"}


id: PBO:0111770
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-GATA type","termid":"PBO:0111770"}


id: MONDO:0004114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A highly aggressive carcinoma, histologically resembling small cell lung carcinoma. In most cases it is associated with carcinoma in situ.","definition_xrefs":["NCIT:C9461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell carcinoma","termid":"MONDO:0000402"},{"relation_name":"is_a","term_name":"urinary bladder carcinoma","termid":"MONDO:0004986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"urinary bladder small cell neuroendocrine carcinoma","secondary_identifiers":["DOID:7132","Orphanet:284400","EFO:1000129","GARD:11923","MEDGEN:231950","ONCOTREE:SCBC","UMLS:C1332564"],"synonyms":[{"name":"SCCB","type":"exact"},{"name":"bladder small cell neuroendocrine cancer","type":"exact"},{"name":"bladder small cell neuroendocrine carcinoma","type":"exact"},{"name":"poorly differentiated neuroendocrine carcinoma of the bladder","type":"exact"},{"name":"small cell bladder cancer","type":"exact"},{"name":"small cell bladder carcinoma","type":"exact"},{"name":"small cell carcinoma of the bladder","type":"related"},{"name":"small cell carcinoma of the urinary bladder","type":"exact"},{"name":"small cell carcinoma of urinary bladder","type":"exact"},{"name":"small cell neuroendocrine carcinoma of the urinary bladder","type":"exact"},{"name":"small cell neuroendocrine carcinoma of urinary bladder","type":"exact"},{"name":"small cell/neuroendocrine carcinoma of urinary bladder","type":"exact"},{"name":"urinary bladder small cell carcinoma","type":"exact"}],"termid":"MONDO:0004114","xrefs":{"Monarch":{"xref_id":"0004114"}}}


id: GO:0140003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone reader that recognizes a histone H3 trimethylated at lysine 36.","definition_xrefs":["PMID:16364921","PMID:15489290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 reader activity","termid":"GO:0140006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0140566"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0030674","GO:0060090","GO:0003674","GO:0140566"],"is_obsolete":false,"name":"histone H3K36me3 reader activity","synonyms":[{"name":"H3-K36me3 modified histone binding","type":"narrow"},{"name":"H3K36me3 modified histone binding","type":"narrow"}],"termid":"GO:0140003"}


id: PBO:0073454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFT2 domain containing 3","termid":"PBO:0073454"}


id: MONDO:0017837
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple sclerosis-ichthyosis-factor VIII deficiency syndrome is characterized by the association of multiple sclerosis with lamellar ichthyosis and hematological anomalies (beta thalassemia minor and a quantitative deficit of factor VIII-von Willebrand complex). Other clinical manifestations may include eye involvement (optic atrophy, diplopia), neuromuscular involvement (ataxia, pyramidal syndrome, gait disturbance) and sensory disorder. There have been no further descriptions in the literature since 1992.","definition_xrefs":["Orphanet:3151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"},{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"multiple sclerosis-ichthyosis-factor VIII deficiency syndrome","secondary_identifiers":["UMLS:C4518551","MEDGEN:1391655","GARD:18787"],"termid":"MONDO:0017837","xrefs":{"Monarch":{"xref_id":"0017837"}}}


id: PBO:0031676
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_pole_body_localization","termid":"PBO:0031676"}


id: GO:1900534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of palmitic acid.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid catabolic process","termid":"GO:0042758"},{"relation_name":"is_a","term_name":"palmitic acid metabolic process","termid":"GO:1900533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"palmitic acid catabolic process","termid":"GO:1900534"}


id: GO:0015406
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete ABC-type uptake permease activity (obsolete GO:0015406)","synonyms":[{"name":"ABC-type uptake permease activity","type":"exact"}],"termid":"GO:0015406"}


id: GO:0004641
data:
  {"annotated_genes":["SJAG_03140"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109747],"is_not":false,"summary":null,"term":"GO:0004641"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-(formamido)-N(1)-(5-phospho-D-ribosyl)acetamidine + ATP = 5-amino-1-(5-phospho-D-ribosyl)imidazole + ADP + 2 H+ + phosphate.","definition_xrefs":["RHEA:23032","EC:6.3.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclo-ligase activity","termid":"GO:0016882"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"phosphoribosylformylglycinamidine cyclo-ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R04208","MetaCyc:AIRS-RXN","Reactome:R-HSA-73810"],"synonyms":[{"name":"2-(formamido)-1-N-(5-phosphoribosyl)acetamidine cyclo-ligase (ADP-forming)","type":"related"},{"name":"2-(formamido)-N1-(5-phosphoribosyl)acetamidine cyclo-ligase (ADP-forming)","type":"related"},{"name":"5'-aminoimidazole ribonucleotide synthetase activity","type":"related"},{"name":"AIR synthase activity","type":"related"},{"name":"AIR synthetase activity","type":"related"},{"name":"AIRS activity","type":"related"},{"name":"phosphoribosyl-aminoimidazole synthetase activity","type":"related"},{"name":"phosphoribosylaminoimidazole synthetase activity","type":"related"}],"termid":"GO:0004641","terms_by_termid":{"GO:0004641":null}}


id: MONDO:0859276
data:
  {"annotated_genes":["SJAG_04994"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85354],"is_not":false,"summary":null,"term":"MONDO:0859276"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04994":null},"genotype_count":0,"is_obsolete":false,"name":"primordial dwarfism-immunodeficiency-lipodystrophy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620005","UMLS:C5774198","MEDGEN:1823971"],"termid":"MONDO:0859276","terms_by_termid":{"MONDO:0859276":null},"xrefs":{"Monarch":{"xref_id":"0859276"}}}


id: GO:1905193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chloroplast fission.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26862170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"regulation of chloroplast fission","termid":"GO:1905192"},{"relation_name":"negatively_regulates","term_name":"chloroplast fission","termid":"GO:0010020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chloroplast fission","synonyms":[{"name":"down regulation of chloroplast division","type":"exact"},{"name":"down regulation of chloroplast fission","type":"exact"},{"name":"down-regulation of chloroplast division","type":"exact"},{"name":"down-regulation of chloroplast fission","type":"exact"},{"name":"downregulation of chloroplast division","type":"exact"},{"name":"downregulation of chloroplast fission","type":"exact"},{"name":"inhibition of chloroplast division","type":"narrow"},{"name":"inhibition of chloroplast fission","type":"narrow"},{"name":"negative regulation of chloroplast division","type":"exact"}],"termid":"GO:1905193"}


id: GO:1902804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of synaptic vesicle transport.","definition_xrefs":["GO_REF:0000058","PMID:23527112","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle transport","termid":"GO:1902803"},{"relation_name":"negatively_regulates","term_name":"synaptic vesicle transport","termid":"GO:0048489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of synaptic vesicle transport","synonyms":[{"name":"down regulation of synaptic vesicle fission","type":"related"},{"name":"down regulation of synaptic vesicle fusion","type":"related"},{"name":"down regulation of synaptic vesicle transport","type":"exact"},{"name":"down-regulation of synaptic vesicle fission","type":"related"},{"name":"down-regulation of synaptic vesicle fusion","type":"related"},{"name":"down-regulation of synaptic vesicle transport","type":"exact"},{"name":"downregulation of synaptic vesicle fission","type":"related"},{"name":"downregulation of synaptic vesicle fusion","type":"related"},{"name":"downregulation of synaptic vesicle transport","type":"exact"},{"name":"inhibition of synaptic vesicle fission","type":"related"},{"name":"inhibition of synaptic vesicle fusion","type":"related"},{"name":"inhibition of synaptic vesicle transport","type":"narrow"},{"name":"negative regulation of synaptic vesicle fission","type":"related"},{"name":"negative regulation of synaptic vesicle fusion","type":"related"}],"termid":"GO:1902804"}


id: PR:P53695
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exonuclease 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11081:SF8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exodeoxyribonuclease 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.05","secondary_identifiers":["UniProtKB:P53695"],"synonyms":[{"name":"EXO I (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC29A10.05","type":"related"},{"name":"Spom972h-EXO1","type":"exact"},{"name":"exodeoxyribonuclease I (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"exonuclease I (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P53695"}


id: SO:0001580
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that changes the coding sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exon_variant","termid":"SO:0001791"},{"relation_name":"is_a","term_name":"coding_transcript_variant","termid":"SO:0001968"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding_sequence_variant","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","SO:0001581","http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp","http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"Jannovar:coding_sequence_variant","type":"exact"},{"name":"Seattleseq:coding","type":"exact"},{"name":"VAAST:coding_sequence_variant","type":"exact"},{"name":"VEP:coding_sequence_variant","type":"exact"},{"name":"coding sequence variant","type":"exact"},{"name":"coding variant","type":"exact"},{"name":"codon variant","type":"exact"},{"name":"codon_variant","type":"exact"},{"name":"snpEff:CDS","type":"exact"},{"name":"snpEff:CODON_CHANGE","type":"related"}],"termid":"SO:0001580"}


id: GO:0061727
data:
  {"annotated_genes":["SJAG_04726","SJAG_02988","SJAG_04674","SJAG_01596","SJAG_02106","SJAG_02960","SJAG_04404"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58884,60649,104538],"is_not":false,"summary":null,"term":"GO:0061727"},{"annotations":[91928,99821,102295,112304,87449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019243"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of methylglyoxal, CH3-CO-CHO, into lactate.","definition_xrefs":["PMID:2198020","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate metabolic process","termid":"GO:0006089"},{"relation_name":"is_a","term_name":"methylglyoxal catabolic process","termid":"GO:0051596"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01596":null,"SJAG_02106":null,"SJAG_02960":null,"SJAG_02988":null,"SJAG_04404":null,"SJAG_04674":null,"SJAG_04726":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"methylglyoxal catabolic process to lactate","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0061727","terms_by_termid":{"GO:0019243":null,"GO:0061727":null}}


id: PBO:0059888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 11","termid":"PBO:0059888"}


id: GO:0030906
data:
  {"annotated_genes":["SJAG_01039"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[117906],"is_not":false,"summary":null,"term":"GO:0030906"}]},"cv_name":"cellular_component","definition":"The trimeric subcomplex of the retromer, believed to be closely associated with the membrane. This trimeric complex is responsible for recognizing and binding to cargo molecules. The complex comprises three Vps proteins in both yeast and mammalian cells: Vps35p, Vps29p, and Vps26p in yeast, and VPS35, VPS29 and VPS26A or VPS26B in mammals.","definition_xrefs":["PMID:9700157","PMID:26220253","PMID:11102511","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"retromer complex","termid":"GO:0030904"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01039":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"retromer, cargo-selective complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cargo-selective retromer subcomplex","type":"exact"},{"name":"retromer CSC","type":"exact"},{"name":"retromer complex, inner shell","type":"exact"},{"name":"retromer, CRC","type":"exact"},{"name":"retromer, cargo recognition complex","type":"exact"}],"termid":"GO:0030906","terms_by_termid":{"GO:0030906":null}}


id: MONDO:0012074
data:
  {"annotated_genes":["SJAG_03396"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86132],"is_not":false,"summary":null,"term":"MONDO:0012074"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mandibuloacral dysplasia","termid":"MONDO:0016584"},{"relation_name":"is_a","term_name":"laminopathy","termid":"MONDO:0021106"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03396":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"mandibuloacral dysplasia with type B lipodystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:332940","MESH:C535706","DOID:0081129","Orphanet:90154","OMIM:608612","icd11.foundation:1199517264","UMLS:C1837756","GARD:9989"],"synonyms":[{"name":"MADB","type":"related"},{"name":"MANDIBULOACRAL dysplasia with type B lipodystrophy","type":"related"},{"name":"lipodystrophy, type B, associated with Mandibuloacral dysplasia","type":"related"},{"name":"mandibuloacral dysplasia with type B lipodystrophy","type":"exact"}],"termid":"MONDO:0012074","terms_by_termid":{"MONDO:0012074":null},"xrefs":{"Monarch":{"xref_id":"0012074"}}}


id: GO:0033963
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: 5,6alpha-epoxy-5alpha-cholestan-3beta-ol + H2O = cholestane-3beta-5alpha,6beta-triol, and 5,6beta-epoxy-5beta-cholestan-3beta-ol + H2O = cholestane-3beta-5alpha,6beta-triol.","definition_xrefs":["EC:3.3.2.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether hydrolase activity","termid":"GO:0016803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"cholesterol-5,6-oxide hydrolase activity","synonyms":[{"name":"5,6alpha-epoxy-5alpha-cholestan-3beta-ol hydrolase activity","type":"related"},{"name":"ChEH","type":"related"},{"name":"cholesterol-epoxide hydrolase activity","type":"related"}],"termid":"GO:0033963"}


id: PBO:0071934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 11","termid":"PBO:0071934"}


id: GO:0070916
data:
  {"annotated_genes":["SJAG_03015","SJAG_00506"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94624,96994],"is_not":false,"summary":null,"term":"GO:0070916"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses inositol phosphoceramide synthase activity and contains a catalytic subunit and a regulatory subunit (Aur1p and Kei1p, respectively, in Saccharomyces).","definition_xrefs":["GOC:mah","PMID:19726565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00506":null,"SJAG_03015":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991","GO:0005794"],"is_obsolete":false,"name":"inositol phosphoceramide synthase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"IPC synthase complex","type":"exact"}],"termid":"GO:0070916","terms_by_termid":{"GO:0070916":null}}


id: PBO:0064902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 3 catalytic subunit beta","termid":"PBO:0064902"}


id: GO:0008078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of mesodermal cells from one site to another.","definition_xrefs":["GOC:tb","PMID:25119047","GOC:ascb_2009","GOC:dph","GOC:sat","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ameboidal-type cell migration","termid":"GO:0001667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesodermal cell migration","synonyms":[{"name":"mesoderm cell migration","type":"exact"}],"termid":"GO:0008078"}


id: PBO:0059191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRGPRF antisense RNA 1","termid":"PBO:0059191"}


id: PBO:0004862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L13 (predicted)","termid":"PBO:0004862"}


id: PBO:0065096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase AMP-activated non-catalytic subunit gamma 3","termid":"PBO:0065096"}


id: GO:1902631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of membrane hyperpolarization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23223304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of membrane hyperpolarization","termid":"GO:1902630"},{"relation_name":"negatively_regulates","term_name":"membrane hyperpolarization","termid":"GO:0060081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of membrane hyperpolarization","synonyms":[{"name":"down regulation of membrane hyperpolarization","type":"exact"},{"name":"down-regulation of membrane hyperpolarization","type":"exact"},{"name":"downregulation of membrane hyperpolarization","type":"exact"},{"name":"inhibition of membrane hyperpolarization","type":"narrow"}],"termid":"GO:1902631"}


id: MONDO:0010143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lethal restrictive dermopathy (obsolete MONDO:0010143)","termid":"MONDO:0010143","xrefs":{"Monarch":{"xref_id":"0010143"}}}


id: FYPO:0005452
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one of two different alleles of a gene is lost more frequently than normal after a double-strand break forms nearby.","definition_xrefs":["PMID:17724078","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased break-induced loss of heterozygosity","synonyms":[{"name":"increased break-induced loss of heterozygosity during mitotic cell cycle","type":"related"},{"name":"increased break-induced loss of heterozygosity during vegetative growth","type":"exact"}],"termid":"FYPO:0005452"}


id: PBO:0038940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADH5 pseudogene 4","termid":"PBO:0038940"}


id: PBO:0016586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transthyretin/hydroxyisourate hydrolase (predicted)","termid":"PBO:0016586"}


id: PBO:0027581
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_with_fragmented_DNA","termid":"PBO:0027581"}


id: PBO:0012551
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by S. cerevisiae TEM1","termid":"PBO:0012551"}


id: GO:0042037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The methylation of peptidyl-L-histidine to form peptidyl-L-3'-methyl-L-histidine (otherwise known as pi-methylhistidine, pros-methylhistidine).","definition_xrefs":["RESID:AA0073"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-histidine methylation, to form pros-methylhistidine (obsolete GO:0042037)","synonyms":[{"name":"peptidyl-histidine pros-methylation","type":"exact"}],"termid":"GO:0042037"}


id: GO:0015000
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete polyferredoxin (obsolete GO:0015000)","synonyms":[{"name":"polyferredoxin","type":"exact"}],"termid":"GO:0015000"}


id: GO:0030271
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage: Phe-Xaa > Tyr-Xaa > Trp-Xaa > Leu-Xaa.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete chymase activity (obsolete GO:0030271)","synonyms":[{"name":"SK protease activity","type":"related"},{"name":"chymase activity","type":"exact"},{"name":"mast cell protease I activity","type":"narrow"},{"name":"mast cell serine proteinase","type":"narrow"},{"name":"skeletal muscle (SK) protease activity","type":"narrow"},{"name":"skeletal muscle protease","type":"narrow"},{"name":"skin chymotryptic proteinase","type":"narrow"}],"termid":"GO:0030271"}


id: MONDO:0700259
data:
  {"annotated_genes":["SJAG_02039"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012472"}]},"cv_name":"mondo","definition":"Any type 1 interferonopathies in which the cause of the disease is a variation in the RNASEH2A gene. Individuals with variants in RNASEH2A can present with a variety of phenotypes, including Aicardi-Goutieres syndrome.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"type 1 interferonopathy","termid":"MONDO:0700264"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02039":null},"genotype_count":0,"is_obsolete":false,"name":"RNASEH2A-related type 1 interferonopathy","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0700259","terms_by_termid":{"MONDO:0012472":null},"xrefs":{"Monarch":{"xref_id":"0700259"}}}


id: PATO:0000924
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000924 relative enzyme function (obsolete PATO:0000924)","termid":"PATO:0000924"}


id: GO:0030797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 24-methylidenelophenol + S-adenosyl-L-methionine(1+) = (Z)-24-ethylidenelophenol + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:21044","EC:2.1.1.143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"24-methylenesterol C-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R05776","MetaCyc:2.1.1.143-RXN"],"synonyms":[{"name":"24-methylenelophenol C-24(1)-methyltransferase activity","type":"related"},{"name":"24-methylenelophenol C-241-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:24-methylenelophenol C-methyltransferase activity","type":"related"},{"name":"SMT(2) activity","type":"narrow"},{"name":"SMT2","type":"related"}],"termid":"GO:0030797"}


id: MONDO:0002660
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An eyelid disease that is characterized by exacerbations and remissions of eyelid edema, which results in a stretching and subsequent atrophy of the eyelid tissue, leading to the formation of redundant folds over the lid margins.","definition_xrefs":["DOID:348","Wikipedia:Blepharochalasis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eyelid disorder","termid":"MONDO:0003382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"blepharochalasis","secondary_identifiers":["UMLS:C0005742","HP:0010749","MEDGEN:14154","ICD10CM:H02.3","ICD9:374.34","icd11.foundation:583527617","SCTID:47704002"],"synonyms":[{"name":"blepharochalasis","type":"exact"},{"name":"blepharochalasis (disease)","type":"exact"}],"termid":"MONDO:0002660","xrefs":{"Monarch":{"xref_id":"0002660"}}}


id: MONDO:0036918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"punctate acrokeratoderma freckle-like pigmentation","secondary_identifiers":["MEDGEN:1814481","GARD:4603","Orphanet:99710","UMLS:C5681635"],"termid":"MONDO:0036918","xrefs":{"Monarch":{"xref_id":"0036918"}}}


id: PBO:0086692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; induced by treatment with 8-methoxypsoralen and UVA irradiation; null mutant is sensitive to expression of the top1-T722A allele; SWAT-GFP and mCherry fusion proteins localize to the cell periphery and vacuole; TDA6 has a paralog, VPS62, that arose from the whole genome duplication","termid":"PBO:0086692"}


id: PBO:0054449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1846","termid":"PBO:0054449"}


id: PBO:0084383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low affinity glucose transporter of the major facilitator superfamily; expression is induced in low or high glucose conditions; HXT3 has a paralog, HXT5, that arose from the whole genome duplication","termid":"PBO:0084383"}


id: PBO:0001251
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininemia","termid":"PBO:0001251"}


id: GO:0050267
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (cis-prenyl)n-diphosphate + isopentenyl diphosphate = (cis-prenyl)(n+1)-diphosphate + diphosphate.","definition_xrefs":["RHEA:18801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyl diphosphate synthase activity","termid":"GO:0120531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016765","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"rubber cis-polyprenylcistransferase activity","secondary_identifiers":["MetaCyc:2.5.1.20-RXN","EC:2.5.1.20"],"synonyms":[{"name":"cis-prenyl transferase activity","type":"related"},{"name":"isopentenyl pyrophosphate cis-1,4-polyisoprenyl transferase activity","type":"related"},{"name":"poly-cis-polyprenyl-diphosphate:isopentenyl-diphosphate polyprenylcistransferase activity","type":"related"},{"name":"rubber allyltransferase activity","type":"related"},{"name":"rubber polymerase activity","type":"related"},{"name":"rubber prenyltransferase activity","type":"related"},{"name":"rubber transferase activity","type":"broad"}],"termid":"GO:0050267"}


id: MONDO:0029001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Disorders caused by the intentional or unintentional ingestion or exposure to chemical substances such as pharmaceutical preparations; noxae; and pesticides.","definition_xrefs":["MESH:D064419"],"gene_count":0,"genotype_count":0,"name":"obsolete chemically-induced disorder (obsolete MONDO:0029001)","synonyms":[{"name":"chemically induced disorders","type":"related"},{"name":"chemically-induced disorder","type":"exact"},{"name":"disorder, chemically-induced","type":"related"},{"name":"disorders, chemically-induced","type":"related"}],"termid":"MONDO:0029001","xrefs":{"Monarch":{"xref_id":"0029001"}}}


id: PBO:0078276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 9-4","termid":"PBO:0078276"}


id: GO:0004585
data:
  {"annotated_genes":["SJAG_00635"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97667],"is_not":false,"summary":null,"term":"GO:0004585"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: carbamoyl phosphate + L-ornithine = phosphate + L-citrulline.","definition_xrefs":["EC:2.1.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxyl- or carbamoyltransferase activity","termid":"GO:0016743"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"ornithine carbamoyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ORNCARBAMTRANSFER-RXN","Reactome:R-HSA-70560","RHEA:19513"],"synonyms":[{"name":"L-ornithine carbamoyltransferase activity","type":"related"},{"name":"L-ornithine carbamyltransferase activity","type":"related"},{"name":"L-ornithine transcarbamylase activity","type":"related"},{"name":"OTC activity","type":"related"},{"name":"OTCase activity","type":"related"},{"name":"carbamoyl-phosphate:L-ornithine carbamoyltransferase activity","type":"related"},{"name":"carbamylphosphate-ornithine transcarbamylase activity","type":"related"},{"name":"citrulline phosphorylase activity","type":"related"},{"name":"ornithine carbamyltransferase activity","type":"related"},{"name":"ornithine transcarbamylase activity","type":"related"}],"termid":"GO:0004585","terms_by_termid":{"GO:0004585":null}}


id: MONDO:0010280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ptosis, hereditary congenital, 1","termid":"MONDO:0008340"},{"relation_name":"is_a","term_name":"ptosis","termid":"MONDO:0000728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ptosis, hereditary congenital 2","secondary_identifiers":["MESH:C564553","MEDGEN:337515","OMIM:300245","GARD:18163","UMLS:C1846128"],"synonyms":[{"name":"Ptos2","type":"related"},{"name":"ptosis, X-linked","type":"related"},{"name":"ptosis, hereditary congenital 2","type":"exact"},{"name":"ptosis, hereditary congenital 2, X-linked dominant","type":"exact"},{"name":"ptosis, hereditary congenital type 2","type":"exact"}],"termid":"MONDO:0010280","xrefs":{"Monarch":{"xref_id":"0010280"}}}


id: GO:0046542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of alpha-factor, one of the two yeast mating factors, out of a cell.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-factor export (obsolete GO:0046542)","synonyms":[{"name":"alpha-factor export","type":"exact"}],"termid":"GO:0046542"}


id: GO:0043372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CD4-positive, alpha-beta T cell differentiation.","definition_xrefs":["GOC:pr","ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of CD4-positive, alpha-beta T cell differentiation","termid":"GO:0043370"},{"relation_name":"is_a","term_name":"positive regulation of alpha-beta T cell differentiation","termid":"GO:0046638"},{"relation_name":"is_a","term_name":"positive regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000516"},{"relation_name":"positively_regulates","term_name":"CD4-positive, alpha-beta T cell differentiation","termid":"GO:0043367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of CD4-positive, alpha-beta T cell differentiation","synonyms":[{"name":"activation of CD4-positive, alpha beta T cell differentiation","type":"narrow"},{"name":"positive regulation of CD4-positive T lymphocyte differentiation","type":"exact"},{"name":"positive regulation of CD4-positive T-cell differentiation","type":"exact"},{"name":"positive regulation of CD4-positive T-lymphocyte differentiation","type":"exact"},{"name":"positive regulation of CD4-positive, alpha beta T cell development","type":"related"},{"name":"positive regulation of CD4-positive, alpha beta T cell differentiation","type":"exact"},{"name":"positive regulation of CD4-positive, alpha beta T lymphocyte differentiation","type":"exact"},{"name":"positive regulation of CD4-positive, alpha beta T-cell differentiation","type":"exact"},{"name":"positive regulation of CD4-positive, alpha beta T-lymphocyte differentiation","type":"exact"},{"name":"stimulation of CD4-positive, alpha beta T cell differentiation","type":"narrow"},{"name":"up regulation of CD4-positive, alpha beta T cell differentiation","type":"exact"},{"name":"up-regulation of CD4-positive, alpha beta T cell differentiation","type":"exact"},{"name":"upregulation of CD4-positive, alpha beta T cell differentiation","type":"exact"}],"termid":"GO:0043372"}


id: GO:0006065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UDP-glucuronate, a substance composed of glucuronic acid in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"UDP-glucuronate metabolic process","termid":"GO:0046398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"UDP-glucuronate biosynthetic process","synonyms":[{"name":"UDP-glucuronate anabolism","type":"exact"},{"name":"UDP-glucuronate biosynthesis","type":"exact"},{"name":"UDP-glucuronate formation","type":"exact"},{"name":"UDP-glucuronate synthesis","type":"exact"}],"termid":"GO:0006065"}


id: MONDO:0003188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete juvenile myoclonic epilepsy (obsolete MONDO:0003188)","termid":"MONDO:0003188","xrefs":{"Monarch":{"xref_id":"0003188"}}}


id: PBO:0080010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP12 pseudogene Y-linked","termid":"PBO:0080010"}


id: PBO:0017434
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-starts_during","termid":"PBO:0017434"}


id: GO:0034354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide (NAD), beginning with the synthesis of tryptophan from simpler precursors; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH.","definition_xrefs":["PMID:17161604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"'de novo' NAD biosynthetic process","termid":"GO:0034627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"'de novo' NAD biosynthetic process from tryptophan","synonyms":[{"name":"de novo NAD biosynthetic process from tryptophan","type":"related"}],"termid":"GO:0034354"}


id: PBO:0027776
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_2-bromo-2-(((4-methylphenyl)sulfonyl)methyl)-1-indanone","termid":"PBO:0027776"}


id: PBO:0017518
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Twin Horse Tails","termid":"PBO:0017518"}


id: PBO:0071672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 4","termid":"PBO:0071672"}


id: GO:0032150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ubiquinone, beginning with the conversion of chorismate to 4-hydroxybenzoate.","definition_xrefs":["PMID:11583838","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquinone biosynthetic process","termid":"GO:0006744"},{"relation_name":"is_a","term_name":"chorismate metabolic process","termid":"GO:0046417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006744"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006744","GO:0044281"],"is_obsolete":false,"name":"ubiquinone biosynthetic process from chorismate","termid":"GO:0032150"}


id: PBO:0051619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin enhancer binding factor 2 pseudogene 1","termid":"PBO:0051619"}


id: PBO:0057676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1267","termid":"PBO:0057676"}


id: PBO:0046601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 3","termid":"PBO:0046601"}


id: PBO:0070756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 12","termid":"PBO:0070756"}


id: FYPO:0001753
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a population of cells grow normally (i.e. indistinguishably from wild type) under anaerobic conditions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell population growth","termid":"FYPO:0000047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000257","FYPO:0000003","FYPO:0002058","FYPO:0000139"],"is_obsolete":false,"name":"normal anaerobic cell population growth","synonyms":[{"name":"normal anaerobic growth","type":"broad"}],"termid":"FYPO:0001753"}


id: MONDO:0007732
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Holt-Oram syndrome (HOS) is the most common form of heart-hand syndrome and is characterized by skeletal abnormalities of the upper limbs and mild-to-severe congenital cardiac defects.","definition_xrefs":["Orphanet:392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"heart-hand syndrome","termid":"MONDO:0016432"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0000426","MONDO:0005497"],"is_obsolete":false,"name":"Holt-Oram syndrome","secondary_identifiers":["ICD9:759.89","NCIT:C125592","MEDGEN:120524","NORD:1248","MedDRA:10050469","MESH:C535326","SCTID:19092004","GARD:6666","OMIM:142900","UMLS:C0265264","DOID:0060468"],"synonyms":[{"name":"Cardiac-limb syndrome","type":"related"},{"name":"HOLT-Oram syndrome","type":"exact"},{"name":"HOS","type":"exact"},{"name":"HOS 1","type":"related"},{"name":"Holt Oram Syndrome","type":"exact"},{"name":"Holt-Oram syndrome","type":"exact"},{"name":"Hos1","type":"related"},{"name":"atrio digital syndrome","type":"broad"},{"name":"atrio-digital syndrome","type":"broad"},{"name":"atriodigital dysplasia","type":"broad"},{"name":"atriodigital dysplasia type 1","type":"exact"},{"name":"heart-hand syndrome","type":"broad"},{"name":"heart-hand syndrome type 1","type":"exact"},{"name":"heart-hand syndrome, type 1","type":"related"},{"name":"ventriculo-radial syndrome","type":"related"}],"termid":"MONDO:0007732","xrefs":{"Monarch":{"xref_id":"0007732"}}}


id: PBO:0090009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUE domain protein Cue3, human ASCC2 ortholog, activating signal cointegrator 1 complex","termid":"PBO:0090009"}


id: MONDO:0018666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hepatoblastoma (HB) is a malignant hepatic tumor and is the most common pediatric liver cancer. It is characterized by anorexia, weight loss and an enlarged abdomen. HB is more common in patients with familial adenomatous polyposis (FAP), and can occur in patients with other pre-existing liver conditions. About 5% of HB cases are associated with genetic factors, especially overgrowth syndromes, such as Beckwith-Wiedemann syndrome (BWS) or hemihypertrophy.","definition_xrefs":["Orphanet:449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonal neoplasm","termid":"MONDO:0005564"},{"relation_name":"is_a","term_name":"hepatocellular carcinoma","termid":"MONDO:0007256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"hepatoblastoma","secondary_identifiers":["MedDRA:10062001","GARD:2657","icd11.foundation:1241693063","ICDO:8970/3","MEDGEN:61644","NANDO:2200046","UMLS:C0206624","DOID:687","EFO:1000292","NCIT:C3728","ONCOTREE:LIHB","icd11.foundation:1556608523","MESH:D018197"],"synonyms":[{"name":"HBL","type":"exact"},{"name":"hepatoblastoma","type":"exact"},{"name":"hepatoblastoma, malignant","type":"exact"},{"name":"paediatric embryonal hepatoma","type":"exact"},{"name":"paediatric hepatoblastoma","type":"exact"},{"name":"pediatric embryonal hepatoma","type":"exact"},{"name":"pediatric hepatoblastoma","type":"exact"}],"termid":"MONDO:0018666","xrefs":{"Monarch":{"xref_id":"0018666"}}}


id: GO:0032732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-1 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-1 production","termid":"GO:0032652"},{"relation_name":"positively_regulates","term_name":"interleukin-1 production","termid":"GO:0032612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-1 production","secondary_identifiers":["GO:0045362","GO:0050716"],"synonyms":[{"name":"activation of interleukin-1 production","type":"narrow"},{"name":"positive regulation of IL-1 production","type":"exact"},{"name":"positive regulation of interleukin-1 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-1 secretion","type":"narrow"},{"name":"stimulation of interleukin-1 production","type":"narrow"},{"name":"up regulation of interleukin-1 production","type":"exact"},{"name":"up-regulation of interleukin-1 production","type":"exact"},{"name":"upregulation of interleukin-1 production","type":"exact"}],"termid":"GO:0032732"}


id: PBO:0080987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB20 antisense RNA 3","termid":"PBO:0080987"}


id: PBO:0034546
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_phosphatidic_acid_level","termid":"PBO:0034546"}


id: PBO:0043328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC like kinase 3 pseudogene 2","termid":"PBO:0043328"}


id: PBO:0049295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GSTCD antisense RNA 1","termid":"PBO:0049295"}


id: PATO:0000632
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A symmetry quality inhering in a bearer by virtue of the bearer's being capable of division by a longitudinal plane into similar halves.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symmetry","termid":"PATO:0000965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symmetrical","synonyms":[{"name":"symmetric","type":"exact"}],"termid":"PATO:0000632"}


id: MONDO:0008284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polyposis","termid":"MONDO:0000147"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyposis of gastric fundus without polyposis coli","secondary_identifiers":["MEDGEN:357403","MESH:C566775","OMIM:175505","UMLS:C1868001"],"synonyms":[{"name":"fundic gland polyposis","type":"related"},{"name":"polyposis of gastric fundus without polyposis coli","type":"exact"}],"termid":"MONDO:0008284","xrefs":{"Monarch":{"xref_id":"0008284"}}}


id: PBO:0067960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 262","termid":"PBO:0067960"}


id: PBO:0069954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1247, pseudogene","termid":"PBO:0069954"}


id: PBO:0064302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polo like kinase 5 (inactive)","termid":"PBO:0064302"}


id: GO:1905768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of double-stranded telomeric DNA binding.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GOC:nc","GO_REF:0000059","GOC:BHF_telomere","PMID:18812185"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of double-stranded telomeric DNA binding (obsolete GO:1905768)","synonyms":[{"name":"down regulation of double-stranded telomeric DNA binding","type":"exact"},{"name":"down-regulation of double-stranded telomeric DNA binding","type":"exact"},{"name":"downregulation of double-stranded telomeric DNA binding","type":"exact"},{"name":"inhibition of double-stranded telomeric DNA binding","type":"narrow"}],"termid":"GO:1905768"}


id: PBO:0031377
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_cell_cycle","termid":"PBO:0031377"}


id: GO:0021718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the superior olivary nucleus over time, from its formation to the mature structure. In mice, the superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound.","definition_xrefs":["GO_REF:0000021","GOC:cls","ISBN:0838580343","GOC:dph","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"pons development","termid":"GO:0021548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior olivary nucleus development","synonyms":[{"name":"superior olive development","type":"related"}],"termid":"GO:0021718"}


id: FYPO:0007957
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule rescue (the transition from shrinkage to growth) is abnormal. The frequency of rescues as well as the organisation can be affected.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule dynamics during vegetative growth","termid":"FYPO:0000901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"abnormal microtubule rescue","termid":"FYPO:0007957"}


id: GO:0006297
data:
  {"annotated_genes":["SJAG_00814","SJAG_02818","SJAG_02527","SJAG_02908"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104426,106843,108599,113386],"is_not":false,"summary":null,"term":"GO:0006297"}]},"cv_name":"biological_process","definition":"Repair of the gap in the DNA helix by DNA polymerase and DNA ligase after the portion of the strand containing the lesion has been removed by pyrimidine-dimer repair enzymes.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"nucleotide-excision repair","termid":"GO:0006289"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00814":null,"SJAG_02527":null,"SJAG_02818":null,"SJAG_02908":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"nucleotide-excision repair, DNA gap filling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5696397"],"termid":"GO:0006297","terms_by_termid":{"GO:0006297":null}}


id: GO:0051888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of timing of exogen, the shedding phase of the hair cycle.","definition_xrefs":["GOC:pr","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hair follicle maturation","termid":"GO:0048818"},{"relation_name":"is_a","term_name":"regulation of timing of exogen","termid":"GO:0051887"},{"relation_name":"positively_regulates","term_name":"exogen","termid":"GO:0042638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of timing of exogen","synonyms":[{"name":"activation of exogen","type":"narrow"},{"name":"positive regulation of exogen","type":"related"},{"name":"stimulation of exogen","type":"narrow"},{"name":"up regulation of exogen","type":"related"},{"name":"up-regulation of exogen","type":"related"},{"name":"upregulation of exogen","type":"related"}],"termid":"GO:0051888"}


id: MONDO:0014965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lethal congenital contracture syndrome in which the cause of the disease is a mutation in the GLDN gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lethal congenital contracture syndrome","termid":"MONDO:0017436"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal congenital contracture syndrome 11","secondary_identifiers":["GARD:13220","MEDGEN:934637","UMLS:C4310670","OMIM:617194"],"synonyms":[{"name":"GLDN lethal congenital contracture syndrome","type":"exact"},{"name":"LCCS11","type":"exact"},{"name":"lethal congenital contracture arthrogryposis-11","type":"related"},{"name":"lethal congenital contracture syndrome 11","type":"exact"},{"name":"lethal congenital contracture syndrome 11; LCCS11","type":"exact"},{"name":"lethal congenital contracture syndrome caused by mutation in GLDN","type":"exact"},{"name":"lethal congenital contracture syndrome type 11","type":"exact"}],"termid":"MONDO:0014965","xrefs":{"Monarch":{"xref_id":"0014965"}}}


id: GO:0031651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate or extent of heat generation.","definition_xrefs":["GOC:mah","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heat generation","termid":"GO:0031650"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"heat generation","termid":"GO:0031649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of heat generation","synonyms":[{"name":"down regulation of heat generation","type":"exact"},{"name":"down-regulation of heat generation","type":"exact"},{"name":"downregulation of heat generation","type":"exact"},{"name":"inhibition of heat generation","type":"narrow"}],"termid":"GO:0031651"}


id: MONDO:0010308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An X-linked condition caused by mutation(s) in the GATA1 gene, encoding erythroid transcription factor. It is characterized by thrombocytopenia, as well as abnormal platelet function and morphology. Dyserythropoietic anemia of variable severity may also be present.","definition_xrefs":["NCIT:C136653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocytopenia, X-linked, with or without dyserythropoietic anemia","secondary_identifiers":["UMLS:C3550789","MEDGEN:763703","OMIM:300367"],"synonyms":[{"name":"X-linked thrombocytopenia, with or without dyserythropoietic Anaemia","type":"exact"},{"name":"X-linked thrombocytopenia, with or without dyserythropoietic Anemia","type":"exact"},{"name":"XLTDA","type":"related"},{"name":"thrombocytopenia, X-linked, with or without dyserythropoietic anemia","type":"exact"},{"name":"thrombocytopenia, X-linked, with or without dyserythropoietic anemia, X-linked recessive","type":"exact"}],"termid":"MONDO:0010308","xrefs":{"Monarch":{"xref_id":"0010308"}}}


id: GO:0004463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + leukotriene A(4) = leukotriene B(4).","definition_xrefs":["EC:3.3.2.6","RHEA:22324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether hydrolase activity","termid":"GO:0016803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"leukotriene-A4 hydrolase activity","secondary_identifiers":["Reactome:R-HSA-266072","KEGG_REACTION:R03057","MetaCyc:LEUKOTRIENE-A4-HYDROLASE-RXN"],"synonyms":[{"name":"(7E,9E,11Z,14Z)-(5S,6S)-5,6-epoxyicosa-7,9,11,14-tetraenoate hydrolase activity","type":"related"},{"name":"LTA-4 hydrolase activity","type":"related"},{"name":"LTA4 hydrolase activity","type":"related"},{"name":"LTA4H","type":"related"},{"name":"leukotriene A(4) hydrolase activity","type":"related"},{"name":"leukotriene A4 hydrolase activity","type":"related"}],"termid":"GO:0004463"}


id: MOD:01583
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ8plex-121 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-121 reporter+balance reagent acylated residue","termid":"MOD:01577"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-121 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01583"}


id: PBO:0049101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 158","termid":"PBO:0049101"}


id: GO:0018148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a covalent cross-link between RNA and a peptidyl-tyrosine residue by the formation of O4'-(phospho-5'-RNA)-L-tyrosine.","definition_xrefs":["RESID:AA0249"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA-protein covalent cross-linking via peptidyl-tyrosine (obsolete GO:0018148)","termid":"GO:0018148"}


id: PBO:0034695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene characterisation status","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved_unknown","termid":"PBO:0034695"}


id: PATO:0001693
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viscosity which relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"viscous","termid":"PATO:0000998"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased viscosity","synonyms":[{"name":"high viscosity","type":"exact"}],"termid":"PATO:0001693"}


id: MONDO:0016460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polyvalvular heart disease syndrome is a recently described syndrome characterized by the combination of polyvalvular heart disease, short stature, facial anomalies and intellectual deficit.","definition_xrefs":["Orphanet:228410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"polyvalvular heart disease syndrome","secondary_identifiers":["GARD:20594","UMLS:C4509918","SCTID:723448007","MEDGEN:1376905"],"synonyms":[{"name":"PHD syndrome","type":"exact"}],"termid":"MONDO:0016460","xrefs":{"Monarch":{"xref_id":"0016460"}}}


id: GO:0052109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the deposition of callose by the host in its cell walls, occurring as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of defense-related host cell wall callose deposition (obsolete GO:0052109)","synonyms":[{"name":"activation by symbiont of defense-related host cell wall callose deposition","type":"exact"},{"name":"positive regulation by organism of defense-related callose deposition in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by organism of defense-related cell wall callose deposition in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of defense-related host callose deposition","type":"related"},{"name":"positive regulation by symbiont of defense-related host cell wall callose deposition","type":"related"},{"name":"stimulation by symbiont of defense-related host cell wall callose deposition","type":"related"},{"name":"up regulation by symbiont of defense-related host cell wall callose deposition","type":"related"},{"name":"up-regulation by symbiont of defense-related host cell wall callose deposition","type":"related"},{"name":"upregulation by symbiont of defense-related host cell wall callose deposition","type":"related"}],"termid":"GO:0052109"}


id: PBO:0088498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin family protein, peroxidase","termid":"PBO:0088498"}


id: PBO:0034217
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_concretized_as","termid":"PBO:0034217"}


id: GO:0005020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with stem cell factor (SCF) receptor ligand and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate. Stem cell factor is a cytokine that stimulates mast cell growth and differentiation.","definition_xrefs":["GOC:jl","GOC:signaling","PMID:10698217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein tyrosine kinase activity","termid":"GO:0004714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0004672","GO:0003824","GO:0016740","GO:0038023","GO:0016301","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"stem cell factor receptor activity","synonyms":[{"name":"KIT","type":"related"},{"name":"KIT ligand receptor activity","type":"exact"},{"name":"KL receptor activity","type":"exact"},{"name":"SCF receptor activity","type":"exact"}],"termid":"GO:0005020"}


id: PBO:0002168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2B epsilon subunit (predicted)","termid":"PBO:0002168"}


id: PBO:0047691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fms related receptor tyrosine kinase 3 ligand","termid":"PBO:0047691"}


id: PBO:0018127
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coffin-Lowry Syndrome","termid":"PBO:0018127"}


id: MONDO:0007822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete incisors, long upper central (obsolete MONDO:0007822)","secondary_identifiers":["OMIM:147300"],"synonyms":[{"name":"incisors, long upper central","type":"exact"}],"termid":"MONDO:0007822","xrefs":{"Monarch":{"xref_id":"0007822"}}}


id: MONDO:0006566
data:
  {"annotated_genes":["SJAG_04865","SJAG_00104","SJAG_02698","SJAG_02488","SJAG_04565","SJAG_03158","SJAG_03349","SJAG_04167","SJAG_03352","SJAG_01878","SJAG_01938","SJAG_01474","SJAG_00580","SJAG_05011"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007048"},{"annotations":[85014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033014"},{"annotations":[85506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014131"},{"annotations":[85219,85220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009440"},{"annotations":[84518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007858"},{"annotations":[86219,86221,86220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008416"},{"annotations":[86586,86587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008293"},{"annotations":[85635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013868"},{"annotations":[85498,85497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014713"}]},"cv_name":"mondo","definition":"A skin disorder consisting of hypertrophy of the stratum corneum of the skin.","definition_xrefs":["NCIT:C34745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"keratinization disease","termid":"MONDO:0045011"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00580":null,"SJAG_01474":null,"SJAG_01878":null,"SJAG_01938":null,"SJAG_02488":null,"SJAG_02698":null,"SJAG_03158":null,"SJAG_03349":null,"SJAG_03352":null,"SJAG_04167":null,"SJAG_04565":null,"SJAG_04865":null,"SJAG_05011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"keratosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:9625","EFO:1000720","MESH:D007642","SCTID:254666005","UMLS:C0022593","DOID:161"],"synonyms":[{"name":"keratoderma","type":"exact"}],"termid":"MONDO:0006566","terms_by_termid":{"MONDO:0007048":null,"MONDO:0007858":null,"MONDO:0008293":null,"MONDO:0008416":null,"MONDO:0009440":null,"MONDO:0013868":null,"MONDO:0014131":null,"MONDO:0014713":null,"MONDO:0033014":null},"xrefs":{"Monarch":{"xref_id":"0006566"}}}


id: MONDO:0024479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A epithelial neoplasm that involves the colon.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colonic neoplasm","termid":"MONDO:0005401"},{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"epithelial tumor of colon","synonyms":[{"name":"colon epithelial neoplasm","type":"exact"}],"termid":"MONDO:0024479","xrefs":{"Monarch":{"xref_id":"0024479"}}}


id: PBO:0041947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 7","termid":"PBO:0041947"}


id: PBO:0067347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 444, pseudogene","termid":"PBO:0067347"}


id: PBO:0086528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; YPR014C is not an essential gene","termid":"PBO:0086528"}


id: MOD:00359
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to N2-acetyl-L-arginine.","definition_xrefs":["RESID:AA0354","PubMed:1894641","PubMed:12883043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N2-acetyl-L-arginine","synonyms":[{"name":"(S)-2-acetamido-5-carbamimidamidopentanoic acid","type":"exact"},{"name":"2-acetamido-5-guanidinopentanoic acid","type":"exact"},{"name":"2-acetylamino-5-guanidinopentanoic acid","type":"exact"},{"name":"AcArg","type":"exact"},{"name":"MOD_RES N2-acetylarginine","type":"exact"},{"name":"N(alpha)-acetylarginine","type":"exact"},{"name":"N2-acetyl-L-arginine","type":"exact"},{"name":"N2-acetylated L-arginine","type":"exact"},{"name":"acetylarginine","type":"exact"},{"name":"alpha-acetylamino-delta-guanidinovaleric acid","type":"exact"}],"termid":"MOD:00359"}


id: MONDO:0012434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any arrhythmogenic right ventricular cardiomyopathy in which the cause of the disease is a mutation in the DSG2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial isolated arrhythmogenic ventricular dysplasia, left dominant form","termid":"MONDO:0017401"},{"relation_name":"excluded_subClassOf","term_name":"familial isolated arrhythmogenic ventricular dysplasia, biventricular form","termid":"MONDO:0017402"},{"relation_name":"excluded_subClassOf","term_name":"familial isolated arrhythmogenic ventricular dysplasia, right dominant form","termid":"MONDO:0017403"},{"relation_name":"is_a","term_name":"familial isolated arrhythmogenic right ventricular dysplasia","termid":"MONDO:0016342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"arrhythmogenic right ventricular dysplasia 10","secondary_identifiers":["DOID:0110081","OMIM:610193","UMLS:C1857777","MEDGEN:347543","MESH:C565707"],"synonyms":[{"name":"ARVC10","type":"exact"},{"name":"ARVD10","type":"exact"},{"name":"DSG2 arrhythmogenic right ventricular cardiomyopathy","type":"exact"},{"name":"arrhythmogenic right ventricular cardiomyopathy 10","type":"exact"},{"name":"arrhythmogenic right ventricular cardiomyopathy caused by mutation in DSG2","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia 10","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia type 10","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia, familial, 10","type":"related"},{"name":"arrhythmogenic right ventricular dysplasia, familial, type 10","type":"exact"},{"name":"familial arrhythmogenic right ventricular dysplasia 10","type":"exact"}],"termid":"MONDO:0012434","xrefs":{"Monarch":{"xref_id":"0012434"}}}


id: GO:0045475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The rhythm of the locomotor activity of an organism during its 24 hour activity cycle.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotory behavior","termid":"GO:0007626"},{"relation_name":"is_a","term_name":"circadian behavior","termid":"GO:0048512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"locomotor rhythm","synonyms":[{"name":"circadian locomotor activity rhythm","type":"narrow"}],"termid":"GO:0045475"}


id: PBO:0091021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon related zinc knuckle and gag-polyprotein aspartyl protease","termid":"PBO:0091021"}


id: PBO:0086910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative X-Pro aminopeptidase; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YFR006W is not an essential gene","termid":"PBO:0086910"}


id: PBO:0091155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L4","termid":"PBO:0091155"}


id: GO:0032300
data:
  {"annotated_genes":["SJAG_02748","SJAG_02226","SJAG_02187","SJAG_01620"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91240,104069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032389"},{"annotations":[115934,105554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032301"}]},"cv_name":"cellular_component","definition":"Any complex formed of proteins that act in mismatch repair.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01620":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02748":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"mismatch repair complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032300","terms_by_termid":{"GO:0032301":null,"GO:0032389":null}}


id: PBO:0072268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S21 pseudogene 6","termid":"PBO:0072268"}


id: PBO:0079123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid stimulating hormone subunit beta","termid":"PBO:0079123"}


id: FYPO:0007060
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin filament polymerization, i.e. the addition of actin monomers to a filament, occurs to a lower extent than normal as part of contractile ring assembly during cytokinesis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin filament organization during vegetative growth","termid":"FYPO:0000727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0004803","FYPO:0000002"],"is_obsolete":false,"name":"decreased actin filament depolymerization involved in actomyosin contractile ring assembly","synonyms":[{"name":"decreased actin filament depolymerisation involved in actomyosin contractile ring assembly","type":"exact"},{"name":"decreased actin filament depolymerization involved in actomyosin contractile ring assembly during mitotic cell cycle","type":"related"},{"name":"decreased actin filament depolymerization involved in actomyosin contractile ring assembly during vegetative growth","type":"exact"},{"name":"decreased actin filament depolymerization involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"reduced actin filament depolymerization involved in actomyosin contractile ring assembly","type":"exact"}],"termid":"FYPO:0007060"}


id: MONDO:0024990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diseases of domestic swine and of the wild boar of the genus Sus.","definition_xrefs":["MESH:D013553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swine disease","synonyms":[{"name":"disease, swine","type":"related"},{"name":"diseases, swine","type":"related"},{"name":"swine disease","type":"exact"}],"termid":"MONDO:0024990","xrefs":{"Monarch":{"xref_id":"0024990"}}}


id: GO:0061407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a hydrogen peroxide (H2O2) stimulus.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to hydrogen peroxide (obsolete GO:0061407)","termid":"GO:0061407"}


id: MONDO:0018684
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic neonatal atrial flutter (AFL) is a rare rhythm disorder, characterized by sustained tachycardia in newborns and infants with an atrial rate often at around 440 beats/minute (range 340-580). AFL may manifest as asymptomatic tachycardia, congestive heart failure or hydrops.","definition_xrefs":["Orphanet:45452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial flutter","termid":"MONDO:0005310"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"idiopathic neonatal atrial flutter","secondary_identifiers":["SCTID:715560009","GARD:18831","ICD10CM:P29.1","icd11.foundation:208964573","MEDGEN:904097","UMLS:C4275090"],"synonyms":[{"name":"neonatal cardiac dysrhythmia","type":"exact"}],"termid":"MONDO:0018684","xrefs":{"Monarch":{"xref_id":"0018684"}}}


id: PBO:0074905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 77","termid":"PBO:0074905"}


id: MOD:00488
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:116#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized arginine biotinylated with biotin-LC-hydrazide","synonyms":[{"name":"OxArgBiotin","type":"related"},{"name":"Oxidized arginine biotinylated with biotin-LC-hydrazide","type":"related"}],"termid":"MOD:00488"}


id: PBO:0041365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 4 open reading frame 33","termid":"PBO:0041365"}


id: MONDO:0008666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital abnormality in which the intestine is abnormally rotated (twisted). It may result in intestinal obstruction.","definition_xrefs":["NCIT:C98961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"volvulus of midgut","secondary_identifiers":["SCTID:458422009","MESH:C562456","UMLS:C0221210","OMIM:193250","MEDGEN:113153"],"synonyms":[{"name":"congenital malrotation of intestine","type":"exact"},{"name":"intestinal malrotation","type":"exact"},{"name":"intestinal malrotation, familial","type":"related"},{"name":"volvulus of midgut","type":"exact"}],"termid":"MONDO:0008666","xrefs":{"Monarch":{"xref_id":"0008666"}}}


id: PBO:0002701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex subunit Caf16 (predicted)","termid":"PBO:0002701"}


id: MONDO:0013377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any isolated microphthalmia in which the cause of the disease is a mutation in the GDF3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated microphthalmia","termid":"MONDO:0000062"},{"relation_name":"is_a","term_name":"isolated anophthalmia-microphthalmia syndrome","termid":"MONDO:0016764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated microphthalmia 7","secondary_identifiers":["OMIM:613704","UMLS:C3150969","MEDGEN:462319","DOID:0060838"],"synonyms":[{"name":"GDF3 isolated microphthalmia","type":"exact"},{"name":"MCOP7","type":"exact"},{"name":"isolated microphthalmia caused by mutation in GDF3","type":"exact"},{"name":"isolated microphthalmia type 7","type":"exact"},{"name":"microphthalmia, isolated 7","type":"related"},{"name":"microphthalmia, isolated type 7","type":"exact"}],"termid":"MONDO:0013377","xrefs":{"Monarch":{"xref_id":"0013377"}}}


id: PBO:0068298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 5","termid":"PBO:0068298"}


id: PATO:0000094
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000094 drug sensitivity (obsolete PATO:0000094)","termid":"PATO:0000094"}


id: PBO:0040255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATG10 antisense RNA 1","termid":"PBO:0040255"}


id: GO:0034585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 21U-RNAs, a class of single-stranded RNA molecules of about 21 nucleotides in length characterized by a uridine 5'-monophosphate and a modified 3' end resistant to periodate degradation. 21U-RNAs are derived from distinct, autonomously expressed loci within the genome.","definition_xrefs":["GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"21U-RNA metabolic process","synonyms":[{"name":"21U-RNA metabolism","type":"exact"}],"termid":"GO:0034585"}


id: MONDO:0012406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated hyperparathyroidism","termid":"MONDO:0015027"},{"relation_name":"is_a","term_name":"bone neoplasm","termid":"MONDO:0019060"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"abnormal mineralization disorder","termid":"MONDO:0800096"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperparathyroidism 3","secondary_identifiers":["MEDGEN:355277","GARD:18255","UMLS:C1864729","OMIM:610071","MESH:C566450"],"synonyms":[{"name":"HRPT3","type":"exact"},{"name":"hyperparathyroidism 3","type":"exact"},{"name":"hyperparathyroidism, familial isolated","type":"related"}],"termid":"MONDO:0012406","xrefs":{"Monarch":{"xref_id":"0012406"}}}


id: FYPO:0000002
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_00124:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00124","name":"SJAG_00124delta","uniquename":"SJAG_00124:allele-1"},"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_00993:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00993","name":"byr1delta","uniquename":"SJAG_00993:allele-1"},"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_01081:allele-1":{"allele_type":"nonsense_mutation","description":"S427>stop","gene_uniquename":"SJAG_01081","name":"ade6-domE","uniquename":"SJAG_01081:allele-1"},"SJAG_01081:allele-2":{"allele_type":"amino_acid_mutation","description":"Q262A","gene_uniquename":"SJAG_01081","name":"ade6-domK","uniquename":"SJAG_01081:allele-2"},"SJAG_01081:allele-3":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01081","name":"ade6delta","uniquename":"SJAG_01081:allele-3"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01143:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"711-723","gene_uniquename":"SJAG_01143","name":"mid1-delta(711-723 a.a.)","uniquename":"SJAG_01143:allele-2"},"SJAG_01181:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01181","name":"pek1delta","uniquename":"SJAG_01181:allele-1"},"SJAG_01205:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01205","name":"crb2delta","uniquename":"SJAG_01205:allele-1"},"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01374:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01374","name":"nup132delta","uniquename":"SJAG_01374:allele-1"},"SJAG_01605:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01605","name":"rad9delta","uniquename":"SJAG_01605:allele-1"},"SJAG_01680:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01680","name":"chk1delta","uniquename":"SJAG_01680:allele-1"},"SJAG_01680:allele-2":{"allele_type":"amino_acid_mutation","description":"P470L","gene_uniquename":"SJAG_01680","name":"chk1-P470L","synonyms":[{"name":"chk1- 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id: PBO:0039245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 1 family member B1","termid":"PBO:0039245"}


id: PBO:0011442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi Dsc E3 ligase complex subunit Dsc3","termid":"PBO:0011442"}


id: GO:0120191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of termination of RNA polymerase II transcription.","definition_xrefs":["PMID:29899453","GOC:vw","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transcription by RNA polymerase II","termid":"GO:0000122"},{"relation_name":"is_a","term_name":"negative regulation of termination of DNA-templated transcription","termid":"GO:0060567"},{"relation_name":"is_a","term_name":"regulation of termination of RNA polymerase II transcription","termid":"GO:1904594"},{"relation_name":"negatively_regulates","term_name":"termination of RNA polymerase II transcription","termid":"GO:0006369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0006355","GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"negative regulation of termination of RNA polymerase II transcription","synonyms":[{"name":"down regulation of RNA 3'-end formation by RNA polymerase II","type":"exact"},{"name":"down regulation of RNA polymerase II transcription termination","type":"exact"},{"name":"down regulation of RNA polymerase II transcription termination factor activity","type":"related"},{"name":"down regulation of termination of RNA polymerase II transcription","type":"exact"},{"name":"down regulation of transcription termination from Pol II promoter","type":"exact"},{"name":"down regulation of transcription termination from RNA polymerase II promoter","type":"exact"},{"name":"down-regulation of RNA 3'-end formation by RNA polymerase II","type":"exact"},{"name":"down-regulation of RNA polymerase II transcription termination","type":"exact"},{"name":"down-regulation of RNA polymerase II transcription termination factor activity","type":"related"},{"name":"down-regulation of termination of RNA polymerase II transcription","type":"exact"},{"name":"down-regulation of transcription termination from Pol II promoter","type":"exact"},{"name":"down-regulation of transcription termination from RNA polymerase II promoter","type":"exact"},{"name":"downregulation of RNA 3'-end formation by RNA polymerase II","type":"exact"},{"name":"downregulation of RNA polymerase II transcription termination","type":"exact"},{"name":"downregulation of RNA polymerase II transcription termination factor activity","type":"related"},{"name":"downregulation of termination of RNA polymerase II transcription","type":"exact"},{"name":"downregulation of transcription termination from Pol II promoter","type":"exact"},{"name":"downregulation of transcription termination from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of RNA 3'-end formation by RNA polymerase II","type":"exact"},{"name":"negative regulation of RNA polymerase II transcription termination","type":"exact"},{"name":"negative regulation of RNA polymerase II transcription termination factor activity","type":"related"},{"name":"negative regulation of transcription termination from Pol II promoter","type":"exact"},{"name":"negative regulation of transcription termination from RNA polymerase II promoter","type":"exact"},{"name":"repression of RNA 3'-end formation by RNA polymerase II","type":"narrow"},{"name":"repression of RNA polymerase II transcription termination","type":"narrow"},{"name":"repression of RNA polymerase II transcription termination factor activity","type":"related"},{"name":"repression of termination of RNA polymerase II transcription","type":"narrow"},{"name":"repression of transcription termination from Pol II promoter","type":"narrow"},{"name":"repression of transcription termination from RNA polymerase II promoter","type":"narrow"}],"termid":"GO:0120191"}


id: MONDO:0024494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic qualifier indicating that a cancerous lesion is undifferentiated.","definition_xrefs":["NCIT:C28082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor grade 3 or 4, general grading system","termid":"MONDO:0024497"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor grade 4, general grading system","synonyms":[{"name":"G4","type":"exact"},{"name":"grade 4","type":"exact"},{"name":"grade IV","type":"exact"},{"name":"high grade","type":"broad"},{"name":"undifferentiated","type":"exact"}],"termid":"MONDO:0024494","xrefs":{"Monarch":{"xref_id":"0024494"}}}


id: PBO:0051273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa joining 4","termid":"PBO:0051273"}


id: PBO:0056877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MHC class I polypeptide-related sequence G (pseudogene)","termid":"PBO:0056877"}


id: PBO:0083638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF3j component of translation initiation factor 3 (eIF3); dual function protein involved in translation initiation as a substoichiometric component (eIF3j) of eIF3; required for 20S pre-rRNA processing; required at post-transcriptional step for efficient retrotransposition; absence decreases Ty1 Gag:GFP protein levels; binds eIF3 subunits Rpg1p, Prt1p and 18S rRNA; eIF3 also involved in programmed stop codon read through; human homolog EIF3J can complement yeast hcr1 mutant","termid":"PBO:0083638"}


id: MOD:00428
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces two hydrogen atoms with two hydroxyl groups.","definition_xrefs":["PubMed:12686488","Unimod:425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxylated residue","termid":"MOD:00677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroxylated residue","synonyms":[{"name":"Dioxidation","type":"related"},{"name":"Hy2Res","type":"exact"},{"name":"dihydroxy","type":"related"}],"termid":"MOD:00428"}


id: GO:0071275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an aluminum ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to aluminum ion","termid":"GO:0010044"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to aluminum ion","synonyms":[{"name":"cellular response to aluminium ion","type":"exact"},{"name":"cellular response to aluminum","type":"exact"}],"termid":"GO:0071275"}


id: PBO:0013794
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coordinates updated from 3789585..3789948 to 3789400..3789948","termid":"PBO:0013794"}


id: GO:1903703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an enterocyte.","definition_xrefs":["GO_REF:0000086","GOC:TermGenie","Wikipedia:List_of_intestinal_epithelial_differentiation_genes","PMID:16782882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal epithelial cell differentiation","termid":"GO:0060575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"enterocyte differentiation","termid":"GO:1903703"}


id: PBO:0044444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 22","termid":"PBO:0044444"}


id: PBO:0001531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central kinetochore associated family protein","termid":"PBO:0001531"}


id: PBO:0047310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid synthase","termid":"PBO:0047310"}


id: GO:0061044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels and contribute to the series of events that restore integrity to damaged vasculature.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of angiogenesis","termid":"GO:0016525"},{"relation_name":"is_a","term_name":"regulation of vascular wound healing","termid":"GO:0061043"},{"relation_name":"is_a","term_name":"negative regulation of wound healing","termid":"GO:0061045"},{"relation_name":"negatively_regulates","term_name":"vascular wound healing","termid":"GO:0061042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vascular wound healing","termid":"GO:0061044"}


id: PBO:0005880
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intronic ORF","termid":"PBO:0005880"}


id: PR:O14237
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6F6.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C6F6.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.04c","synonyms":[{"name":"Spom972h-SPAC6F6.04c","type":"exact"}],"termid":"PR:O14237"}


id: PBO:0017543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex ubiquitin-protein ligase E3 subunit Mot2 (predicted)","termid":"PBO:0017543"}


id: GO:0046038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of GMP, guanosine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate catabolic process","termid":"GO:0009169"},{"relation_name":"is_a","term_name":"GMP metabolic process","termid":"GO:0046037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"GMP catabolic process","synonyms":[{"name":"GMP breakdown","type":"exact"},{"name":"GMP catabolism","type":"exact"},{"name":"GMP degradation","type":"exact"}],"termid":"GO:0046038"}


id: PBO:0042072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 141","termid":"PBO:0042072"}


id: PBO:0058298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4672","termid":"PBO:0058298"}


id: PR:000027593
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.2, initiator methionine removed methylated form that is recognized by the HP1-like protein Swi6 in Schizosaccharomyces pombe. Example: UniProtKB:P09988-1, 2-136, Lys-10, MOD:00663.","definition_xrefs":["PomBase:MAH","PMID:11242054","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht2/Me(K9)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"PomBase_original_PRO_term_name: histone H3.2, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht2/InitMet-/K9me","type":"exact"},{"name":"hht2/InitMet-/Me:(K10)","type":"exact"},{"name":"hht2/Me(K9)","type":"exact"}],"termid":"PR:000027593"}


id: PBO:0051739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 6 pseudogene 1","termid":"PBO:0051739"}


id: MONDO:0004462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mucinous cystic neoplasm that arises from the extrahepatic bile ducts.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile duct cystadenoma","termid":"MONDO:0003420"},{"relation_name":"is_a","term_name":"extrahepatic bile duct adenoma","termid":"MONDO:0003445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"extrahepatic bile duct cystadenoma","secondary_identifiers":["NCIT:C5851","MEDGEN:272603","DOID:8105","UMLS:C1333504"],"synonyms":[{"name":"cystadenoma of extrahepatic bile duct","type":"exact"},{"name":"cystadenoma of the extrahepatic bile duct","type":"exact"},{"name":"extrahepatic bile duct cystadenoma","type":"exact"},{"name":"extrahepatic bile duct mucinous cystic neoplasm","type":"exact"}],"termid":"MONDO:0004462","xrefs":{"Monarch":{"xref_id":"0004462"}}}


id: GO:0072655
data:
  {"annotated_genes":["SJAG_02524","SJAG_00373","SJAG_03415","SJAG_02398","SJAG_01597","SJAG_04208","SJAG_01917","SJAG_02077","SJAG_02361","SJAG_00196","SJAG_01615","SJAG_01951","SJAG_01949","SJAG_03648","SJAG_02809","SJAG_04533","SJAG_04641","SJAG_07010","SJAG_04072","SJAG_01879","SJAG_04218","SJAG_01442","SJAG_01004","SJAG_01120","SJAG_04432","SJAG_01780","SJAG_03633","SJAG_02797","SJAG_03358","SJAG_02917","SJAG_01640","SJAG_04336","SJAG_02397","SJAG_02016","SJAG_01647","SJAG_04014","SJAG_00687","SJAG_05302","SJAG_03560","SJAG_05300","SJAG_00564","SJAG_01405","SJAG_01684","SJAG_01560","SJAG_03502","SJAG_03515","SJAG_02355","SJAG_02034","SJAG_00569","SJAG_03416","SJAG_00404","SJAG_04996","SJAG_05259"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97991,94535,96625],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0160203"},{"annotations":[87806,109257],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0045041"},{"annotations":[116744,111290,99041,107078,116276,102783,96373,87807,109372,102197,89016,90377,98743,98927,99814,104680,106999,94003,107056,114726,105666],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0030150"},{"annotations":[92267,88133,107000,102423,107057,98928,89870,107079,112690,115765,106786],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0045039"},{"annotations":[114191,88275,112842,100413,98510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"},{"annotations":[114192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051204"},{"annotations":[109891,109901,107058,97732,98083,109540,89849,111284,90387],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0045040"},{"annotations":[112683,107562,108685,91792,101710,105076],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006627"},{"annotations":[97896,101963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006626"}]},"cv_name":"biological_process","definition":"The directed movement of a protein to the mitochondrion or a part of the mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to mitochondrion","termid":"GO:0070585"},{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_00373":null,"SJAG_00404":null,"SJAG_00564":null,"SJAG_00569":null,"SJAG_00687":null,"SJAG_01004":null,"SJAG_01120":null,"SJAG_01405":null,"SJAG_01442":null,"SJAG_01560":null,"SJAG_01597":null,"SJAG_01615":null,"SJAG_01640":null,"SJAG_01647":null,"SJAG_01684":null,"SJAG_01780":null,"SJAG_01879":null,"SJAG_01917":null,"SJAG_01949":null,"SJAG_01951":null,"SJAG_02016":null,"SJAG_02034":null,"SJAG_02077":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_02397":null,"SJAG_02398":null,"SJAG_02524":null,"SJAG_02797":null,"SJAG_02809":null,"SJAG_02917":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03416":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_03633":null,"SJAG_03648":null,"SJAG_04014":null,"SJAG_04072":null,"SJAG_04208":null,"SJAG_04218":null,"SJAG_04336":null,"SJAG_04432":null,"SJAG_04533":null,"SJAG_04641":null,"SJAG_04996":null,"SJAG_05259":null,"SJAG_05300":null,"SJAG_05302":null,"SJAG_07010":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of protein localization to mitochondrion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment of protein localisation to mitochondrion","type":"exact"},{"name":"establishment of protein localization in mitochondrion","type":"exact"}],"termid":"GO:0072655","terms_by_termid":{"GO:0006626":null,"GO:0006627":null,"GO:0030150":null,"GO:0032979":null,"GO:0045039":null,"GO:0045040":null,"GO:0045041":null,"GO:0051204":null,"GO:0160203":null}}


id: PBO:0079772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UFM1 specific peptidase 2","termid":"PBO:0079772"}


id: MONDO:0020086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete idiopathic interstitial pneumonia (obsolete MONDO:0020086)","termid":"MONDO:0020086","xrefs":{"Monarch":{"xref_id":"0020086"}}}


id: MONDO:0040653
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive form of ocular albinism (disease).","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"ocular albinism","termid":"MONDO:0017304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive ocular albinism","secondary_identifiers":["MEDGEN:541337","SCTID:78921008","UMLS:C0268503"],"synonyms":[{"name":"AROA","type":"related"},{"name":"autosomal recessive ocular albinism","type":"exact"},{"name":"autosomal recessive ocular albinism (disease)","type":"exact"},{"name":"ocular albinism (disease), autosomal recessive","type":"exact"}],"termid":"MONDO:0040653","xrefs":{"Monarch":{"xref_id":"0040653"}}}


id: PBO:0064945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRA1 domain family member 2","termid":"PBO:0064945"}


id: GO:0045112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of integrins, a large family of transmembrane proteins that act as receptors for cell-adhesion molecules.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"part_of","term_name":"plasma membrane organization","termid":"GO:0007009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"integrin biosynthetic process","synonyms":[{"name":"integrin anabolism","type":"exact"},{"name":"integrin biosynthesis","type":"exact"},{"name":"integrin formation","type":"exact"},{"name":"integrin synthesis","type":"exact"}],"termid":"GO:0045112"}


id: MONDO:0024531
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any tubular aggregate myopathy in which the cause of the disease is a mutation in the STIM1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tubular aggregate myopathy","termid":"MONDO:0008051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy, tubular aggregate, 1","secondary_identifiers":["MEDGEN:860163","OMIM:160565","UMLS:C4011726"],"synonyms":[{"name":"STIM1 tubular aggregate myopathy","type":"exact"},{"name":"TAM1","type":"related"},{"name":"myopathy, tubular aggregate","type":"related"},{"name":"myopathy, tubular aggregate, 1","type":"exact"},{"name":"tubular aggregate myopathy","type":"related"},{"name":"tubular aggregate myopathy caused by mutation in STIM1","type":"exact"}],"termid":"MONDO:0024531","xrefs":{"Monarch":{"xref_id":"0024531"}}}


id: GO:0006268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating unpaired template strands for DNA replication.","definition_xrefs":["ISBN:071673706X","ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA unwinding involved in DNA replication (obsolete GO:0006268)","synonyms":[{"name":"DNA unwinding during replication","type":"related"},{"name":"DNA unwinding factor","type":"related"}],"termid":"GO:0006268"}


id: PBO:0047551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 9","termid":"PBO:0047551"}


id: MONDO:0008318
data:
  {"annotated_genes":["SJAG_04394","SJAG_02426","SJAG_04206"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85956,85957,85958],"is_not":false,"summary":null,"term":"MONDO:0008318"}]},"cv_name":"mondo","definition":"Proteus syndrome (PS) is a very rare and complex hamartomatous overgrowth disorder characterized by progressive overgrowth of the skeleton, skin, adipose, and central nervous systems.","definition_xrefs":["Orphanet:744"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"PTEN hamartoma tumor syndrome","termid":"MONDO:0017623"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02426":null,"SJAG_04206":null,"SJAG_04394":null},"genotype_count":0,"is_obsolete":false,"name":"Proteus syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:759.89","SCTID:23150001","NCIT:C85032","UMLS:C0085261","GARD:7475","MEDGEN:39008","DOID:13482","icd11.foundation:760267333","MESH:D016715","OMIM:176920","NORD:1622"],"synonyms":[{"name":"Elattoproteus syndrome","type":"related"},{"name":"Proteus syndrome","type":"exact"},{"name":"Wiedemann's syndrome","type":"exact"},{"name":"gigantism, partial, of hands and feet, nevi, hemihypertrophy, and macrocephaly","type":"related"},{"name":"hemihypertrophy and macrocephaly","type":"related"},{"name":"partial gigantism of hands and feet, nevi, hemihypertrophy, macrocephaly","type":"related"},{"name":"partial gigantism-nevi-hemihypertrophy-macrocephaly syndrome","type":"exact"},{"name":"proteus syndrome, somatic","type":"exact"}],"termid":"MONDO:0008318","terms_by_termid":{"MONDO:0008318":null},"xrefs":{"Monarch":{"xref_id":"0008318"}}}


id: PBO:0038833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 6","termid":"PBO:0038833"}


id: GO:0043818
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADH + O2 + precorrin-3A = H2O + NAD+ + precorrin-3B.","definition_xrefs":["RHEA:17293","EC:1.14.13.83"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"precorrin-3B synthase activity","secondary_identifiers":["MetaCyc:R321-RXN","KEGG_REACTION:R05217"],"synonyms":[{"name":"CobG","type":"related"},{"name":"precorrin-3A,NADH:oxygen oxidoreductase (20-hydroxylating)","type":"exact"},{"name":"precorrin-3X synthase activity","type":"related"}],"termid":"GO:0043818"}


id: MONDO:0002272
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A laboratory test result indicating abnormally high proliferation of gamma globulins in the blood originating from multiple cell lines.","definition_xrefs":["NCIT:C35885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma protein metabolism disease","termid":"MONDO:0002273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"polyclonal hypergammaglobulinemia","secondary_identifiers":["ICD9:273.0","MEDGEN:56337","UMLS:C0154254","DOID:2344","SCTID:190808009","ICD10CM:D89.0"],"synonyms":[{"name":"polyclonal hypergammaglobulinemia","type":"exact"}],"termid":"MONDO:0002272","xrefs":{"Monarch":{"xref_id":"0002272"}}}


id: GO:0070108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of an interleukin-27-mediated signaling pathway.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of interleukin-27-mediated signaling pathway","termid":"GO:0070107"},{"relation_name":"negatively_regulates","term_name":"interleukin-27-mediated signaling pathway","termid":"GO:0070106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of interleukin-27-mediated signaling pathway","synonyms":[{"name":"negative regulation of IL-27-mediated signaling pathway","type":"exact"},{"name":"negative regulation of IL27RA/IL6ST signaling pathway","type":"exact"},{"name":"negative regulation of interleukin-27-mediated signalling pathway","type":"exact"}],"termid":"GO:0070108"}


id: PBO:0081349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 160","termid":"PBO:0081349"}


id: MONDO:0014828
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any immunodeficiency-centromeric instability-facial anomalies syndrome in which the cause of the disease is a mutation in the CDCA7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency-centromeric instability-facial anomalies syndrome","termid":"MONDO:0000133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0006025"],"is_obsolete":false,"name":"immunodeficiency-centromeric instability-facial anomalies syndrome 3","secondary_identifiers":["OMIM:616910","DOID:0090010","UMLS:C4310799","GARD:16168","MEDGEN:934766"],"synonyms":[{"name":"CDCA7 immunodeficiency-centromeric instability-facial anomalies syndrome","type":"exact"},{"name":"ICF syndrome 3","type":"exact"},{"name":"ICF3","type":"related"},{"name":"immunodeficiency-centromeric instability-FACIAL anomalies syndrome 3","type":"related"},{"name":"immunodeficiency-centromeric instability-Facial anomalies syndrome 3","type":"exact"},{"name":"immunodeficiency-centromeric instability-Facial anomalies syndrome type 3","type":"exact"},{"name":"immunodeficiency-centromeric instability-facial anomalies syndrome caused by mutation in CDCA7","type":"exact"},{"name":"immunodeficiency-centromeric instability-facial anomalies syndrome type 3","type":"exact"}],"termid":"MONDO:0014828","xrefs":{"Monarch":{"xref_id":"0014828"}}}


id: MONDO:0024386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of large cell lung carcinoma characterized by a predominance of clear cells that may or may not contain glycogen.","definition_xrefs":["NCIT:C4451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung large cell carcinoma","termid":"MONDO:0003050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"large cell lung carcinoma, clear cell variant","secondary_identifiers":["UMLS:C1707407","MEDGEN:317518","ONCOTREE:CCLC"],"synonyms":[{"name":"clear cell carcinoma of lung, large cell type","type":"exact"},{"name":"clear cell carcinoma of the lung","type":"related"},{"name":"clear cell carcinoma of the lung, large cell type","type":"exact"},{"name":"clear cell lung carcinoma, large cell type","type":"exact"},{"name":"large cell lung carcinoma, clear cell variant","type":"exact"}],"termid":"MONDO:0024386","xrefs":{"Monarch":{"xref_id":"0024386"}}}


id: MONDO:0002861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcoma that arises from the testis. The majority of cases arise from teratomas or spermatocytic seminomas.","definition_xrefs":["NCIT:C6359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular cancer","termid":"MONDO:0005447"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"testis sarcoma","secondary_identifiers":["UMLS:C1336727","DOID:4062","MEDGEN:234943"],"synonyms":[{"name":"sarcoma of testis","type":"exact"},{"name":"sarcoma of the testis","type":"exact"},{"name":"testicular sarcoma","type":"exact"},{"name":"testis sarcoma","type":"exact"}],"termid":"MONDO:0002861","xrefs":{"Monarch":{"xref_id":"0002861"}}}


id: PBO:0060110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 11","termid":"PBO:0060110"}


id: PBO:0082608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Co-chaperone that binds Hsp82p and activates its ATPase activity; plays a role in determining prion variants; similar to Hch1p; expression is regulated by stresses such as heat shock; protein abundance increases in response to DNA replication stress","termid":"PBO:0082608"}


id: FYPO:0006232
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to hydrogen peroxide","synonyms":[{"name":"abolished protein phosphorylation during cellular response to H2O2","type":"exact"},{"name":"abolished protein phosphorylation during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"protein phosphorylation abolished during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0006232"}


id: MONDO:1012952
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Amelogenesis imperfecta that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"mouth disorder, non-human animal","termid":"MONDO:1011333"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta, non-human animal","termid":"MONDO:1012952","xrefs":{"Monarch":{"xref_id":"1012952"}}}


id: MONDO:0018181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A blistering skin disorder caused by exfoliative toxins produced by Staphylococcus aureus infection. The toxins cause the formation of bullae and diffuse skin desquamation. The lesions may be localized or generalized, far away from the initial site of infection.","definition_xrefs":["NCIT:C85077"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"commensal bacterial infectious disease","termid":"MONDO:0000315"},{"relation_name":"is_a","term_name":"staphylococcus aureus infection","termid":"MONDO:0005545"},{"relation_name":"is_a","term_name":"staphylococcal toxemia","termid":"MONDO:0017592"},{"relation_name":"is_a","term_name":"skin disease caused by bacterial infection","termid":"MONDO:0024295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"staphylococcal scalded skin syndrome","secondary_identifiers":["SCTID:200946001","icd11.foundation:1554593739","MedDRA:10041929","GARD:13158","NORD:1781","ICD9:695.81","SCTID:277475006","Orphanet:36236","EFO:0007473","UMLS:C0038165","DOID:9063","MEDGEN:52484","MESH:D013206","ICD10CM:L00"],"synonyms":[{"name":"Ritter disease","type":"exact"},{"name":"Ritter's disease","type":"exact"},{"name":"SSSS","type":"exact"},{"name":"dermatitis exfoliativa neonatorum","type":"exact"},{"name":"generalised exfoliative disease","type":"exact"},{"name":"generalized exfoliative disease","type":"exact"},{"name":"pemphigus neonatorum","type":"exact"},{"name":"scalded skin syndrome","type":"exact"},{"name":"staphylococcal scalded skin syndrome","type":"exact"},{"name":"toxic epidermal necrolysis, subcorneal type","type":"exact"}],"termid":"MONDO:0018181","xrefs":{"Monarch":{"xref_id":"0018181"}}}


id: GO:0008995
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of single-stranded RNA that is monophosphorylated at its 5'-end; cleavage occurs predominantly at 5 nucleotides from the 5'-end and in A + U-rich regions, and is blocked by the presence of a 5'-triphosphate group.","definition_xrefs":["PMID:10722715","PMID:16854990"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA nuclease activity","termid":"GO:0004540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"ribonuclease E activity","secondary_identifiers":["MetaCyc:3.1.26.12-RXN"],"termid":"GO:0008995"}


id: GO:1905663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of telomerase RNA reverse transcriptase activity.","definition_xrefs":["GOC:BHF_telomere","PMID:22633954","GOC:nc","GOC:BHF","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of telomerase RNA reverse transcriptase activity (obsolete GO:1905663)","synonyms":[{"name":"activation of telomerase RNA reverse transcriptase activity","type":"narrow"},{"name":"activation of telomerase, catalyst","type":"narrow"},{"name":"positive regulation of telomerase, catalyst","type":"exact"},{"name":"up regulation of telomerase RNA reverse transcriptase activity","type":"exact"},{"name":"up regulation of telomerase, catalyst","type":"exact"},{"name":"up-regulation of telomerase RNA reverse transcriptase activity","type":"exact"},{"name":"up-regulation of telomerase, catalyst","type":"exact"},{"name":"upregulation of telomerase RNA reverse transcriptase activity","type":"exact"},{"name":"upregulation of telomerase, catalyst","type":"exact"}],"termid":"GO:1905663"}


id: MONDO:0975758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign vascular tumor","termid":"MONDO:0971115"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microvenular haemangioma","secondary_identifiers":["Orphanet:675369"],"termid":"MONDO:0975758","xrefs":{"Monarch":{"xref_id":"0975758"}}}


id: PBO:0046975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member B2","termid":"PBO:0046975"}


id: GO:0086045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which AV node cardiac muscle cell membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane depolarization during cardiac muscle cell action potential","termid":"GO:0086012"},{"relation_name":"part_of","term_name":"AV node cell action potential","termid":"GO:0086016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"membrane depolarization during AV node cell action potential","synonyms":[{"name":"membrane depolarization during AV node cardiac muscle cell action potential","type":"exact"},{"name":"membrane depolarization during atrioventricular node cardiac muscle cell action potential","type":"exact"}],"termid":"GO:0086045"}


id: PBO:0080594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 24","termid":"PBO:0080594"}


id: GO:0015157
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005364"},{"annotations":[95258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008506"}]},"cv_name":"molecular_function","definition":"Enables the transfer of oligosaccharide from one side of a membrane to the other.","definition_xrefs":["GOC:jl","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"oligosaccharide transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"endosomal oligosaccharide transporter","type":"narrow"}],"termid":"GO:0015157","terms_by_termid":{"GO:0005364":null,"GO:0008506":null}}


id: PR:Q9UUE4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptidyl-prolyl cis-trans isomerase-like 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03164","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase cyp6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17G9.05","secondary_identifiers":["UniProtKB:Q9UUE4"],"synonyms":[{"name":"PPIase cyp6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPIL4","type":"exact"},{"name":"rotamase cyp6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUE4"}


id: GO:0031527
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a filopodium.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"part_of","term_name":"filopodium","termid":"GO:0030175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"filopodium membrane","termid":"GO:0031527"}


id: PBO:0077022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioesterase superfamily member 4 pseudogene 1","termid":"PBO:0077022"}


id: PBO:0000700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tat binding protein 1(TBP-1)-interacting protein (TBPIP) homolog (predicted)","termid":"PBO:0000700"}


id: MONDO:0018806
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"biliary tract disorder","termid":"MONDO:0004868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"primary intrahepatic lithiasis","secondary_identifiers":["MEDGEN:1814175","Orphanet:480506","UMLS:C5576557","GARD:21974"],"synonyms":[{"name":"PIHL","type":"exact"},{"name":"primary hepatolithiasis","type":"exact"}],"termid":"MONDO:0018806","xrefs":{"Monarch":{"xref_id":"0018806"}}}


id: PBO:0039501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 24","termid":"PBO:0039501"}


id: PBO:0048915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member J","termid":"PBO:0048915"}


id: GO:0015922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: aspartate + O2 = iminosuccinate + hydrogen peroxide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete aspartate oxidase activity (obsolete GO:0015922)","termid":"GO:0015922"}


id: PBO:0004674
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gyrate atrophy of choroid and retina","termid":"PBO:0004674"}


id: PBO:0058793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7162","termid":"PBO:0058793"}


id: PBO:0043980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cold shock domain containing E1","termid":"PBO:0043980"}


id: GO:0002608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of myeloid dendritic cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of dendritic cell antigen processing and presentation","termid":"GO:0002605"},{"relation_name":"is_a","term_name":"regulation of myeloid dendritic cell antigen processing and presentation","termid":"GO:0002607"},{"relation_name":"negatively_regulates","term_name":"myeloid dendritic cell antigen processing and presentation","termid":"GO:0002469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myeloid dendritic cell antigen processing and presentation","synonyms":[{"name":"down regulation of myeloid dendritic cell antigen processing and presentation","type":"exact"},{"name":"down-regulation of myeloid dendritic cell antigen processing and presentation","type":"exact"},{"name":"downregulation of myeloid dendritic cell antigen processing and presentation","type":"exact"},{"name":"inhibition of myeloid dendritic cell antigen processing and presentation","type":"narrow"}],"termid":"GO:0002608"}


id: PBO:0042711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin EGF LAG seven-pass G-type receptor 2","termid":"PBO:0042711"}


id: PBO:0048157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frizzled class receptor 3","termid":"PBO:0048157"}


id: FYPO:0002469
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that are longer than normal and taper at one end to a diameter smaller than the other. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, elongated tapered cells (obsolete FYPO:0002469)","synonyms":[{"name":"inviable microcolony, elongated bottle/skittle cells","type":"exact"},{"name":"inviable microcolony, elongated skittle-shaped cells","type":"exact"},{"name":"inviable microcolony, elongated tapered vegetative cells","type":"exact"}],"termid":"FYPO:0002469"}


id: MONDO:1011593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Portosystemic shunt that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"portosystemic shunt, non-human animal","termid":"MONDO:1011409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"portosystemic shunt, pig","secondary_identifiers":["OMIA:000817-9823"],"termid":"MONDO:1011593","xrefs":{"Monarch":{"xref_id":"1011593"}}}


id: PBO:0085641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in late endosome to vacuole transport; cytoplasmic and vacuolar membrane protein; required for normal filament maturation during pseudohyphal growth; may function in targeting cargo proteins for degradation; interacts with Vta1p","termid":"PBO:0085641"}


id: PBO:0017022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosylxylosylprotein 3-beta-galactosyltransferase Pvg3","termid":"PBO:0017022"}


id: MONDO:0004742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A heterogenous group of degenerative syndromes marked by progressive cerebellar dysfunction either in isolation or combined with other neurologic manifestations. Sporadic and inherited subtypes occur. Inheritance patterns include autosomal dominant, autosomal recessive, and X-linked.","definition_xrefs":["MESH:D013132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar degeneration","termid":"MONDO:0022687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"primary cerebellar degeneration","secondary_identifiers":["UMLS:C0033132","MEDGEN:19466","DOID:9277","ICD9:334.2","SCTID:23732000"],"termid":"MONDO:0004742","xrefs":{"Monarch":{"xref_id":"0004742"}}}


id: PBO:0069110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 359, pseudogene","termid":"PBO:0069110"}


id: MONDO:0008880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bowen syndrome of multiple malformations","secondary_identifiers":["MESH:C538164","MEDGEN:349159","OMIM:211200","UMLS:C1859404","Orphanet:1271"],"synonyms":[{"name":"Bowen syndrome","type":"exact"},{"name":"Bowen syndrome of multiple malformations","type":"exact"}],"termid":"MONDO:0008880","xrefs":{"Monarch":{"xref_id":"0008880"}}}


id: MOD:00553
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a (2-sulfanylethyl)sulfanyl (or thioethylthiol) group for a hydroxy group.","definition_xrefs":["DeltaMass:0","PubMed:11507762","Unimod:200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,2-ethanedithiol modified residue","synonyms":[{"name":"1,2-ethanedithiol (EDT)","type":"exact"},{"name":"EDT","type":"related"},{"name":"Ethanedithiol","type":"related"}],"termid":"MOD:00553"}


id: GO:0005146
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an leukemia inhibitory factor receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"leukemia inhibitory factor receptor binding","synonyms":[{"name":"leukemia inhibitory factor","type":"narrow"},{"name":"leukemia inhibitory factor receptor ligand","type":"narrow"}],"termid":"GO:0005146"}


id: MOD:00208
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-tyrosine residue and 5'-phosphoadenosine through a phosphodiester bond to form O4'-(phospho-5'-adenosine)-L-tyrosine.","definition_xrefs":["DeltaMass:0","RESID:AA0203","PubMed:5543675","Unimod:405#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"adenylated residue","termid":"MOD:01165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O4'-(phospho-5'-adenosine)-L-tyrosine","synonyms":[{"name":"(2S)-2-amino-3-[4-(5'-adenosine phosphonoxy)phenyl]propanoic acid","type":"exact"},{"name":"5'-adenylic-O-tyrosine","type":"exact"},{"name":"AMP binding site","type":"related"},{"name":"MOD_RES O-AMP-tyrosine","type":"exact"},{"name":"O-5'-Adenosylation ( of Tyrosine)","type":"exact"},{"name":"O4'-(phospho-5'-adenosine)-L-tyrosine","type":"exact"},{"name":"O4'-L-tyrosine 5'-adenosine phosphodiester","type":"exact"},{"name":"OAMPTyr","type":"exact"},{"name":"Phosphoadenosine","type":"related"},{"name":"hydrogen 5'-adenylate tyrosine ester","type":"exact"}],"termid":"MOD:00208"}


id: MONDO:0011468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary motor and sensory neuropathy, Okinawa type is a rare, genetic, axonal hereditary motor and sensory neuropathy characterized by the adult-onset of slowly progressive, symmetric, proximal dominant muscle weakness and atrophy, painful muscle cramps, fasciculations and distal sensory impairment, mostly (but not exclusively) in individuals (and their descendents) from the Okinawa region in Japan. Absent deep tendon reflexes, elevated creatine kinase levels and autosomal dominant inheritance are also characteristic.","definition_xrefs":["Orphanet:90117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"motor peripheral neuropathy","termid":"MONDO:0002316"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"hereditary motor and sensory neuropathy, Okinawa type","secondary_identifiers":["UMLS:C1858338","GARD:10131","MESH:C535717","OMIM:604484","MEDGEN:346886"],"synonyms":[{"name":"HMSNO","type":"related"},{"name":"HMSNP","type":"exact"},{"name":"hereditary motor and sensory neuropathy, proximal type","type":"exact"},{"name":"hereditary motor and sensory neuropathy, proximal type, formerly","type":"related"},{"name":"neuropathy, hereditary motor and sensory, Okinawa type","type":"related"}],"termid":"MONDO:0011468","xrefs":{"Monarch":{"xref_id":"0011468"}}}


id: GO:0170015
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with carbon dioxide to initiate a change in cell activity.","definition_xrefs":["PMID:24240097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"carbon dioxide receptor activity","termid":"GO:0170015"}


id: GO:0070089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium cation by a channel that opens when a chloride ion has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:kmv","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel activity","termid":"GO:0005267"},{"relation_name":"is_a","term_name":"monoatomic ion-gated channel activity","termid":"GO:0022839"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"chloride-activated potassium channel activity","termid":"GO:0070089"}


id: GO:0086097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipase C-activating G protein-coupled receptor signaling pathway initiated by angiotensin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"},{"relation_name":"is_a","term_name":"angiotensin-activated signaling pathway","termid":"GO:0038166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"phospholipase C-activating angiotensin-activated signaling pathway","synonyms":[{"name":"Gq-coupled angiotensin receptor signaling pathway","type":"exact"},{"name":"PLC-activating angiotensin receptor signaling pathway","type":"exact"},{"name":"angiotensin-mediated signaling pathway via activation of phospholipase C","type":"exact"},{"name":"phospholipase C-activating angiotensin receptor signaling pathway","type":"exact"},{"name":"phospholipase C-activating angiotensin-mediated signaling pathway","type":"related"}],"termid":"GO:0086097"}


id: PBO:0001655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQGAP","termid":"PBO:0001655"}


id: PBO:0038608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA binding domain containing 4","termid":"PBO:0038608"}


id: PBO:0088155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vesicle membrane protein (v-SNARE) with acyltransferase activity; involved in trafficking to and within the Golgi, endocytic trafficking to the vacuole, and vacuolar fusion; membrane localization due to prenylation at the carboxy-terminus; human homolog YKT6 can complement yeast ykt6 mutant","termid":"PBO:0088155"}


id: PBO:0080459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and transmembrane domain containing 2 like","termid":"PBO:0080459"}


id: MONDO:0009069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Saguenay-Lac-St. Jean (SLSJ) type congenital lactic acidosis, a French Canadian form of Leigh syndrome, is a mitochondrial disease characterized by chronic metabolic acidosis, hypotonia, facial dysmorphism and delayed development.","definition_xrefs":["Orphanet:70472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"Leigh syndrome","termid":"MONDO:0009723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002320","MONDO:0004069","MONDO:0005244"],"is_obsolete":false,"name":"congenital lactic acidosis, Saguenay-Lac-Saint-Jean type","secondary_identifiers":["UMLS:C1857355","DOID:0111180","SCTID:718219002","GARD:8370","MEDGEN:387801","OMIM:220111","MESH:C537004"],"synonyms":[{"name":"COX deficiency, French-Canadian type","type":"exact"},{"name":"Cox deficiency, French Canadian type","type":"related"},{"name":"Cox deficiency, Saguenay Lac saint Jean type","type":"related"},{"name":"Cox deficiency, Saguenay-Lac-Saint-Jean type","type":"related"},{"name":"LSFC","type":"related"},{"name":"Leigh syndrome, French Canadian type","type":"related"},{"name":"Leigh syndrome, French-Canadian type","type":"exact"},{"name":"Leigh syndrome, Saguenay Lac saint Jean type","type":"related"},{"name":"Leigh syndrome, Saguenay-Lac-Saint-Jean type","type":"exact"},{"name":"SLSJ-COX deficiency","type":"exact"},{"name":"congenital lactic acidosis, Saguenay-Lac-Saint-Jean type","type":"exact"},{"name":"cytochrome C oxidase deficiency, French Canadian type","type":"related"},{"name":"cytochrome C oxidase deficiency, French-Canadian type","type":"exact"},{"name":"cytochrome oxidase deficiency, Saguenay-Lac-Saint-Jean type","type":"exact"},{"name":"mitochondrial complex IV deficiency, nuclear type 5, (French-Canadian)","type":"exact"}],"termid":"MONDO:0009069","xrefs":{"Monarch":{"xref_id":"0009069"}}}


id: GO:0060655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the branching structure of the mammary gland cord is generated and organized. The mammary gland cord is a solid epithelial structure that will hollow out, forming the mammary duct.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branching involved in mammary gland duct morphogenesis","termid":"GO:0060444"},{"relation_name":"part_of","term_name":"mammary gland cord morphogenesis","termid":"GO:0060652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branching involved in mammary gland cord morphogenesis","termid":"GO:0060655"}


id: MONDO:0003173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An astrocytoma that arises from the brain stem.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain stem glioma","termid":"MONDO:0002911"},{"relation_name":"is_a","term_name":"brain astrocytoma","termid":"MONDO:0021631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"brain stem astrocytic neoplasm","secondary_identifiers":["NCIT:C7445","UMLS:C1332608","SCTID:107581000119103","MEDGEN:231458","DOID:4860"],"synonyms":[{"name":"astrocytoma (excluding glioblastoma) of brainstem","type":"exact"},{"name":"brain stem astrocytoma","type":"exact"},{"name":"brainstem astrocytoma","type":"exact"},{"name":"brainstem astrocytoma (excluding glioblastoma)","type":"exact"}],"termid":"MONDO:0003173","xrefs":{"Monarch":{"xref_id":"0003173"}}}


id: PBO:0046064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF3J pseudogene 3","termid":"PBO:0046064"}


id: GO:0009056
data:
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