# terms

id: PBO:0001717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tppl homolog Tpz1","termid":"PBO:0001717"}


id: GO:0052499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete pathogen-associated molecular pattern dependent modulation by organism of symbiont innate immunity (obsolete GO:0052499)","synonyms":[{"name":"pathogen-associated molecular pattern dependent modulation by organism of symbiont innate immunity","type":"exact"}],"termid":"GO:0052499"}


id: PBO:0029280
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_mitotic_spindle_pole_body_during_metaphase","termid":"PBO:0029280"}


id: PBO:0017632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E4 Ufd2 (predicted)","termid":"PBO:0017632"}


id: GO:0034520
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-naphthaldehyde + NAD+ + H2O = 2-naphthoate + NADH + H+.","definition_xrefs":["UM-BBD_reactionID:r0772"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-naphthaldehyde dehydrogenase activity (obsolete GO:0034520)","termid":"GO:0034520"}


id: SO:0001607
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant of a codon causing the substitution of a similar amino acid for another in the resulting polypeptide.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid_substitution","termid":"SO:0001606"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conservative_amino_acid_substitution","synonyms":[{"name":"conservative amino acid substitution","type":"exact"}],"termid":"SO:0001607"}


id: PBO:0004639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase Swf1 (predicted)","termid":"PBO:0004639"}


id: PBO:0065370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"presenilin 1","termid":"PBO:0065370"}


id: GO:0090104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and functional features of a pancreatic epsilon cell. A pancreatic epsilon cell is a cell in the pancreas that secretes ghrelin.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enteroendocrine cell differentiation","termid":"GO:0035883"},{"relation_name":"part_of","term_name":"endocrine pancreas development","termid":"GO:0031018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreatic epsilon cell differentiation","synonyms":[{"name":"pancreatic E cell differentiation","type":"exact"}],"termid":"GO:0090104"}


id: GO:0032405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a MutLalpha mismatch repair complex.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair complex binding","termid":"GO:0032404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"MutLalpha complex binding","termid":"GO:0032405"}


id: PBO:0069387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 647, pseudogene","termid":"PBO:0069387"}


id: MONDO:0004122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive, small cell, poorly differentiated thymic neuroendocrine carcinoma, characterized by the presence of a high mitotic rate and numerous apoptotic bodies.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell carcinoma","termid":"MONDO:0000402"},{"relation_name":"is_a","term_name":"thymic neuroendocrine carcinoma","termid":"MONDO:0020516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"thymus small cell carcinoma","secondary_identifiers":["MEDGEN:234784","NCIT:C6460","UMLS:C1335980","DOID:7142","EFO:1000578"],"synonyms":[{"name":"Thymus small cell carcinoma","type":"exact"},{"name":"small cell carcinoma of Thymus","type":"exact"},{"name":"small cell carcinoma of the Thymus","type":"exact"},{"name":"small cell carcinoma of thymus","type":"exact"},{"name":"thymic small cell carcinoma","type":"exact"},{"name":"thymic small cell carcinoma neuroendocrine type","type":"exact"},{"name":"thymus small cell carcinoma","type":"exact"}],"termid":"MONDO:0004122","xrefs":{"Monarch":{"xref_id":"0004122"}}}


id: PBO:0065698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio RNA binding family member 3","termid":"PBO:0065698"}


id: MONDO:0700108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease, non-human animal","termid":"MONDO:0700049"},{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prion disease, non-human animal","termid":"MONDO:0700108","xrefs":{"Monarch":{"xref_id":"0700108"}}}


id: PBO:0013463
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichostatin A suppresses accumulation of septated cells, but does not restore wild-type checkpoint function, in rad3delta or rad3-36 mutant","termid":"PBO:0013463"}


id: PBO:0057752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1911","termid":"PBO:0057752"}


id: GO:0042362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any of a diverse group of vitamins that are soluble in organic solvents and relatively insoluble in water.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fat-soluble vitamin metabolic process","termid":"GO:0006775"},{"relation_name":"is_a","term_name":"vitamin biosynthetic process","termid":"GO:0009110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"fat-soluble vitamin biosynthetic process","synonyms":[{"name":"fat-soluble vitamin anabolism","type":"exact"},{"name":"fat-soluble vitamin biosynthesis","type":"exact"},{"name":"fat-soluble vitamin formation","type":"exact"},{"name":"fat-soluble vitamin synthesis","type":"exact"}],"termid":"GO:0042362"}


id: GO:0100042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates pseudohyphal growth.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of pseudohyphal growth by transcription from RNA polymerase II promoter (obsolete GO:0100042)","termid":"GO:0100042"}


id: PBO:0040292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1","termid":"PBO:0040292"}


id: MOD:00006
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydrogen atom on a nitrogen with a carbohydrate-like group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N-glycosylated residue","synonyms":[{"name":"NGlycoRes","type":"exact"}],"termid":"MOD:00006"}


id: GO:0047711
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: blasticidin S + H2O = deaminohydroxyblasticidin S + NH3.","definition_xrefs":["MetaCyc:BLASTICIDIN-S-DEAMINASE-RXN","EC:3.5.4.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"blasticidin-S deaminase activity","secondary_identifiers":["RHEA:10148"],"synonyms":[{"name":"blasticidin-S aminohydrolase activity","type":"related"}],"termid":"GO:0047711"}


id: GO:0099095
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an inorganic anion by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion channel activity","termid":"GO:0005253"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic ion channel activity","termid":"GO:0015276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ligand-gated monoatomic anion channel activity","synonyms":[{"name":"ligand-gated anion channel activity","type":"broad"}],"termid":"GO:0099095"}


id: PBO:0083063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydroorotase; catalyzes the third enzymatic step in the de novo biosynthesis of pyrimidines, converting carbamoyl-L-aspartate into dihydroorotate","termid":"PBO:0083063"}


id: GO:0018313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein active site cross-link from the alpha-carboxyl carbon of residue N, an alanine, to the alpha-amino nitrogen of residue N+2, a glycine, coupled with the formation of a double bond to the alpha-amino nitrogen of residue N+1 which loses one hydrogen, and the loss of a molecule of water.","definition_xrefs":["RESID:AA0187"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-alanyl-5-imidazolinone glycine (obsolete GO:0018313)","termid":"GO:0018313"}


id: GO:1905375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a homocysteine stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:26722473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to homocysteine","termid":"GO:1905374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to homocysteine","synonyms":[{"name":"cellular response to 2-amino-4-mercaptobutyric acid","type":"exact"},{"name":"cellular response to 2-amino-4-sulfanylbutanoic acid","type":"exact"},{"name":"cellular response to Hcy","type":"exact"}],"termid":"GO:1905375"}


id: GO:0001790
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a J-chain-containing polymeric immunoglobulin of the IgA or IgM isotypes.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin binding","termid":"GO:0019865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"polymeric immunoglobulin binding","termid":"GO:0001790"}


id: PBO:0079343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 27, pseudogene","termid":"PBO:0079343"}


id: MONDO:0200001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chromate resistance (obsolete MONDO:0200001)","secondary_identifiers":["OMIM:118840"],"synonyms":[{"name":"CHR","type":"related"},{"name":"CHROMATE RESISTANCE","type":"related"}],"termid":"MONDO:0200001","xrefs":{"Monarch":{"xref_id":"0200001"}}}


id: PBO:0044788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 1 and alpha 3, variable copy number locus","termid":"PBO:0044788"}


id: PBO:0045712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DAZ interacting zinc finger protein 3","termid":"PBO:0045712"}


id: PR:O59799
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- coa4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain-containing protein C550.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.01c","synonyms":[{"name":"Spom972h-coa4","type":"exact"}],"termid":"PR:O59799"}


id: PBO:0039264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 9 family member A1","termid":"PBO:0039264"}


id: MONDO:0005820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral hemorrhagic fever that is caused by the Lassa virus, which is transmitted by contact with infected rodents; it is characterized by fever, headache, malaise, myalgia, and hearing loss.","definition_xrefs":["NCIT:C128418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arenavirus hemorrhagic fever","termid":"MONDO:0005651"},{"relation_name":"is_a","term_name":"lassa virus infectious disease","termid":"MONDO:0044750"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lassa fever","secondary_identifiers":["MESH:D007835","Orphanet:99824","UMLS:C0023092","SCTID:19065005","ICD9:078.89","DOID:9537","GARD:19688","ICD10CM:A96.2","icd11.foundation:515020316","EFO:0007338","MedDRA:10023927","MEDGEN:7276"],"synonyms":[{"name":"LF","type":"exact"},{"name":"Lassa hemorrhagic fever","type":"exact"}],"termid":"MONDO:0005820","xrefs":{"Monarch":{"xref_id":"0005820"}}}


id: PBO:0088775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAN complex (poly(A)-specific ribonuclease) ubiquitin C-terminal hydrolase subunit Pan2","termid":"PBO:0088775"}


id: GO:0110109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of imaginal disc-derived wing vein specification.","definition_xrefs":["PMID:11861482","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of imaginal disc-derived wing vein specification","termid":"GO:0110107"},{"relation_name":"negatively_regulates","term_name":"imaginal disc-derived wing vein specification","termid":"GO:0007474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of imaginal disc-derived wing vein specification","termid":"GO:0110109"}


id: GO:0090555
data:
  {"annotated_genes":["SJAG_01945","SJAG_05209","SJAG_01731","SJAG_02897","SJAG_00669"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93916,97426,98980,99692,111988],"is_not":false,"summary":null,"term":"GO:0090555"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of phosphatidylethanolamine from the exoplasmic to the cytosolic leaflet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["PMID:16452632","PMID:20043909","GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid flippase activity","termid":"GO:0140333"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00669":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02897":null,"SJAG_05209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0140303"}],"interesting_parent_ids":["GO:0140303","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"phosphatidylethanolamine flippase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP-dependent phosphatidylethanolamine transporter activity","type":"related"},{"name":"ATPase-coupled phosphatidylethanolamine transporter activity","type":"broad"},{"name":"phosphatidylethanolamine flippase activity (exoplasmic to cytosolic leaflet)","type":"exact"},{"name":"phosphatidylethanolamine-translocating ATPase activity","type":"related"}],"termid":"GO:0090555","terms_by_termid":{"GO:0090555":null}}


id: PBO:0043429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornichon family AMPA receptor auxiliary protein 1","termid":"PBO:0043429"}


id: MONDO:0010882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aphalangy-syndactyly-microcephaly is an extremely rare malformation syndrome characterized by the association of partial distal aphalangia with syndactyly, duplication of metatarsal IV, microcephaly, and mild intellectual disability.","definition_xrefs":["Orphanet:1113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"aphalangy-syndactyly-microcephaly syndrome","secondary_identifiers":["UMLS:C1838161","MEDGEN:324958","OMIM:600384","MESH:C563942","GARD:748"],"synonyms":[{"name":"APHALANGIA, partial, with syndactyly and DUPLICATION of metatarsal IV","type":"related"},{"name":"Aphalangia partial with syndactyly and duplication of metatarsal IV","type":"related"},{"name":"Aphalangia, partial, with syndactyly and Duplication of metatarsal 4","type":"related"},{"name":"Aphalangia, partial, with syndactyly and Duplication of metatarsal type 4","type":"exact"}],"termid":"MONDO:0010882","xrefs":{"Monarch":{"xref_id":"0010882"}}}


id: MONDO:0003899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A myxoid chondrosarcoma occurring in adults.","definition_xrefs":["NCIT:C27378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myxoid chondrosarcoma","termid":"MONDO:0003681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult myxoid chondrosarcoma","secondary_identifiers":["MEDGEN:312875","DOID:6495","UMLS:C1706731"],"synonyms":[{"name":"adult myxoid chondrosarcoma","type":"exact"},{"name":"myxoid chondrosarcoma of adults","type":"exact"}],"termid":"MONDO:0003899","xrefs":{"Monarch":{"xref_id":"0003899"}}}


id: GO:1905217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an astaxanthin stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:22309505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to astaxanthin","synonyms":[{"name":"response to (3S,3'S)-3,3'-dihydroxy-beta,beta-carotene-4,4'-dione","type":"exact"}],"termid":"GO:1905217"}


id: PBO:0091804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, non-coding RNA (predicted)","termid":"PBO:0091804"}


id: PBO:0058914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12132","termid":"PBO:0058914"}


id: GO:0140325
data:
  {"annotated_genes":["SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93894],"is_not":false,"summary":null,"term":"GO:0140325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to the medial cortex.","definition_xrefs":["PMID:30853434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to medial cortex","termid":"GO:0106011"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to plasma membrane","termid":"GO:1903077"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to cell cortex","termid":"GO:1904777"},{"relation_name":"negatively_regulates","term_name":"protein localization to medial cortex","termid":"GO:0071574"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to medial cortex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140325","terms_by_termid":{"GO:0140325":null}}


id: PBO:0027707
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA_polymerase_processivity_factor_activity","termid":"PBO:0027707"}


id: PBO:0062673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 14 subfamily A member 2","termid":"PBO:0062673"}


id: PBO:0048808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit beta 2","termid":"PBO:0048808"}


id: MONDO:0000447
data:
  {"annotated_genes":["SJAG_03535","SJAG_00175","SJAG_01950"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008265"},{"annotations":[85554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014860"},{"annotations":[84592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054743"}]},"cv_name":"mondo","definition":"An autosomal dominant inherited condition characterized by many cysts of various sizes scattered throughout the liver.","definition_xrefs":["GARD:0009457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00175":null,"SJAG_01950":null,"SJAG_03535":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"autosomal dominant polycystic liver disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0158683","MedDRA:10010427","ICD9:751.62","GARD:9457","MedDRA:10048834","MEDGEN:56388","OMIMPS:174050","HP:0006557","Orphanet:2924","SCTID:72925005","DOID:0050770","icd11.foundation:1361740083","NCIT:C82833","MedDRA:10083939","icd11.foundation:423904268","ICD10CM:Q44.6"],"synonyms":[{"name":"AD polycystic liver disease","type":"exact"},{"name":"ADPLD","type":"exact"},{"name":"PCLD","type":"exact"},{"name":"congenital cystic liver disease","type":"related"},{"name":"congenital hepatic cyst","type":"related"},{"name":"fibrocystic liver disease","type":"related"},{"name":"isolated congenital polycystic liver disease","type":"exact"},{"name":"isolated polycystic liver disease","type":"exact"},{"name":"polycystic liver disease","type":"exact"}],"termid":"MONDO:0000447","terms_by_termid":{"MONDO:0008265":null,"MONDO:0014860":null,"MONDO:0054743":null},"xrefs":{"Monarch":{"xref_id":"0000447"}}}


id: PBO:0078954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCT) 5-1","termid":"PBO:0078954"}


id: MONDO:0020279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete metabolic disease with corneal opacity (obsolete MONDO:0020279)","secondary_identifiers":["Orphanet:98711"],"termid":"MONDO:0020279","xrefs":{"Monarch":{"xref_id":"0020279"}}}


id: MONDO:0054852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"peeling skin syndrome","termid":"MONDO:0019347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"peeling skin syndrome 6","secondary_identifiers":["DOID:0070525","OMIM:618084","UMLS:C4748093","MEDGEN:1648406"],"synonyms":[{"name":"PSS6","type":"related"},{"name":"peeling skin syndrome 6","type":"exact"}],"termid":"MONDO:0054852","xrefs":{"Monarch":{"xref_id":"0054852"}}}


id: PBO:0029052
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_degradation","termid":"PBO:0029052"}


id: PBO:0054969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2383","termid":"PBO:0054969"}


id: GO:1905856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pentose-phosphate shunt.","definition_xrefs":["PMID:19015259","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pentose-phosphate shunt","termid":"GO:0043456"},{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide metabolic process","termid":"GO:1900543"},{"relation_name":"negatively_regulates","term_name":"pentose-phosphate shunt","termid":"GO:0006098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006091","GO:0005975","GO:0055086"],"is_obsolete":false,"name":"negative regulation of pentose-phosphate shunt","termid":"GO:1905856"}


id: MONDO:1010999
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Syringomyelia that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syringomyelia, non-human animal","termid":"MONDO:1010236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syringomyelia, domestic cat","secondary_identifiers":["OMIA:000965-9685"],"termid":"MONDO:1010999","xrefs":{"Monarch":{"xref_id":"1010999"}}}


id: GO:0140913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dissemination of mature viral particles from a host cell, caused by a virus hydrolyzing the peptidoglycan cell wall of the host organism. Peptidoglycans are any of a class of glycoconjugates found in bacterial cell walls.","definition_xrefs":["PMID:29495305","PMID:24585055","PMID:26085488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral release from host cell by cytolysis","termid":"GO:0044659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral release via disruption of host peptidoglycan cell wall","termid":"GO:0140913"}


id: PBO:0028925
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription","termid":"PBO:0028925"}


id: MONDO:0006002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A general term for mycobacterium infections of any part of the urogenital system in either the male or the female.","definition_xrefs":["MESH:D014401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrapulmonary tuberculosis","termid":"MONDO:0000368"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urogenital tuberculosis","secondary_identifiers":["ICD9:016.9","ICD9:016.90","UMLS:C0041333","ICD9:016","DOID:2149","EFO:0007531","ICD9:016.92","MEDGEN:11950","SCTID:4445009"],"synonyms":[{"name":"genitourinary system tuberculosis","type":"exact"},{"name":"genitourinary tuberculosis","type":"related"}],"termid":"MONDO:0006002","xrefs":{"Monarch":{"xref_id":"0006002"}}}


id: GO:0050491
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + sulcatol = H+ + NADH + sulcatone.","definition_xrefs":["EC:1.1.1.260","RHEA:24484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sulcatone reductase activity","secondary_identifiers":["MetaCyc:1.1.1.260-RXN","KEGG_REACTION:R05678"],"synonyms":[{"name":"sulcatol:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0050491"}


id: MONDO:1012958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atactic disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atactic disorder, non-human animal","termid":"MONDO:1012958","xrefs":{"Monarch":{"xref_id":"1012958"}}}


id: FYPO:0006388
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which meiotic spindle pole body organization is abnormal during the first meiotic nuclear division. Meiotic spindle pole body organization is a process that results in the assembly, arrangement of constituent parts, or disassembly of the meiotic spindle pole body (SPB).","definition_xrefs":["GO:1990395","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"},{"relation_name":"is_a","term_name":"abnormal spindle pole body organization","termid":"FYPO:0003560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0000054"],"is_obsolete":false,"name":"abnormal meiotic spindle pole body organization during meiosis I","synonyms":[{"name":"abnormal meiotic SPB organization during meiosis I","type":"exact"},{"name":"abnormal meiotic spindle pole body organisation during meiosis I","type":"exact"},{"name":"abnormal spindle pole body organization during meiosis I","type":"exact"}],"termid":"FYPO:0006388"}


id: PBO:0074963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-5","termid":"PBO:0074963"}


id: PBO:0035825
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_ubiquitination_during_vegetative_growth","termid":"PBO:0035825"}


id: GO:0061406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of deprivation of glucose.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to glucose starvation (obsolete GO:0061406)","termid":"GO:0061406"}


id: GO:0071725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a triacylated bacterial lipopeptide stimulus.","definition_xrefs":["GOC:add","PMID:12524386","PMID:12077222","PMID:2757794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to bacterial lipopeptide","termid":"GO:0070339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to triacyl bacterial lipopeptide","synonyms":[{"name":"response to triacylated bacterial lipoprotein","type":"exact"}],"termid":"GO:0071725"}


id: PBO:0017544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, G-patch type, splicing factor 45 ortholog (predicted)","termid":"PBO:0017544"}


id: PBO:0031134
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_translation_in_response_to_oxidative_stress","termid":"PBO:0031134"}


id: GO:0033970
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-oxo-3-ureidopropanoate + H2O = H+ + malonate + urea.","definition_xrefs":["EC:3.5.1.95","RHEA:17361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"N-malonylurea hydrolase activity","secondary_identifiers":["KEGG_REACTION:R07629","MetaCyc:3.5.1.95-RXN"],"synonyms":[{"name":"3-oxo-3-ureidopropanoate amidohydrolase (urea- and malonate-forming) activity","type":"related"},{"name":"ureidomalonase activity","type":"related"}],"termid":"GO:0033970"}


id: GO:0018984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving naphthalenesulfonate, sulfonated derivatives of naphthalene.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid metabolic process","termid":"GO:0006082"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"naphthalenesulfonate metabolic process","secondary_identifiers":["GO:0018932","UM-BBD_pathwayID:nphs"],"synonyms":[{"name":"naphthalenesulfonate metabolism","type":"exact"},{"name":"naphthalenesulphonate metabolic process","type":"exact"},{"name":"naphthalenesulphonate metabolism","type":"exact"}],"termid":"GO:0018984"}


id: PBO:0058313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4686","termid":"PBO:0058313"}


id: PBO:0047361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 15","termid":"PBO:0047361"}


id: GO:0030158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a beta-D-xylosyl residue from UDP-D-xylose to the serine hydroxyl group of an acceptor protein substrate.","definition_xrefs":["EC:2.4.2.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-xylosyltransferase activity","termid":"GO:0035252"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0140096","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"protein xylosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-1878002","RHEA:50192","MetaCyc:2.4.2.26-RXN"],"synonyms":[{"name":"UDP-D-xylose:core protein beta-D-xylosyltransferase activity","type":"related"},{"name":"UDP-D-xylose:core protein xylosyltransferase activity","type":"related"},{"name":"UDP-D-xylose:protein beta-D-xylosyltransferase activity","type":"related"},{"name":"UDP-D-xylose:proteoglycan core protein beta-D-xylosyltransferase activity","type":"related"},{"name":"UDP-xylose-core protein beta-D-xylosyltransferase activity","type":"related"},{"name":"peptide O-xylosyltransferase activity","type":"exact"},{"name":"uridine diphosphoxylose-core protein beta-xylosyltransferase activity","type":"related"},{"name":"uridine diphosphoxylose-protein xylosyltransferase activity","type":"related"}],"termid":"GO:0030158"}


id: MONDO:0022109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete catatrichy (obsolete MONDO:0022109)","secondary_identifiers":["OMIM:116850","MESH:C535346"],"synonyms":[{"name":"forelock","type":"related"}],"termid":"MONDO:0022109","xrefs":{"Monarch":{"xref_id":"0022109"}}}


id: GO:0102460
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: kaempferol-3-gentiobioside + UDP-L-rhamnose = H+ + kaempferol-3-O-gentiobioside-7-O-rhamnoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete kaempferol 3-gentiobioside 7-O-rhamnosyltransferase activity (obsolete GO:0102460)","termid":"GO:0102460"}


id: MONDO:0010685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 1, X-linked","secondary_identifiers":["MESH:C564091","MEDGEN:326540","UMLS:C1839612","OMIM:310460"],"synonyms":[{"name":"MYP1","type":"exact"},{"name":"myopia 1, X-linked","type":"exact"},{"name":"myopia-1, X-linked recessive","type":"exact"}],"termid":"MONDO:0010685","xrefs":{"Monarch":{"xref_id":"0010685"}}}


id: GO:1904407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nitric oxide metabolic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11991626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of nitric oxide metabolic process","termid":"GO:0080164"},{"relation_name":"positively_regulates","term_name":"nitric oxide metabolic process","termid":"GO:0046209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nitric oxide metabolic process","synonyms":[{"name":"activation of nitric oxide metabolic process","type":"narrow"},{"name":"activation of nitric oxide metabolism","type":"narrow"},{"name":"positive regulation of nitric oxide metabolism","type":"exact"},{"name":"up regulation of nitric oxide metabolic process","type":"exact"},{"name":"up regulation of nitric oxide metabolism","type":"exact"},{"name":"up-regulation of nitric oxide metabolic process","type":"exact"},{"name":"up-regulation of nitric oxide metabolism","type":"exact"},{"name":"upregulation of nitric oxide metabolic process","type":"exact"},{"name":"upregulation of nitric oxide metabolism","type":"exact"}],"termid":"GO:1904407"}


id: MONDO:0020704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, neuromuscular disorder characterized by muscle hyperirritability triggered by stretch, percussion or movement. Patients present wave-like, electrically-silent muscle contractions (rippling), muscle mounding, painful muscle stiffness and muscle hypertrophy, usually with elevated serum creatine kinase.","definition_xrefs":["Orphanet:97238"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"caveolinopathy","termid":"MONDO:0016146"},{"relation_name":"is_a","term_name":"rippling muscle disease","termid":"MONDO:0011634"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"inherited rippling muscle disease","secondary_identifiers":["MedDRA:10069417"],"synonyms":[{"name":"RMD","type":"broad"},{"name":"rippling muscle disease","type":"broad"}],"termid":"MONDO:0020704","xrefs":{"Monarch":{"xref_id":"0020704"}}}


id: PATO:0001317
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A temperature which is increased by a high degree.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased temperature","termid":"PATO:0001305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"severe increased temperature","termid":"PATO:0001317"}


id: GO:1902250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of erythrocyte apoptotic process.","definition_xrefs":["GOC:rl","GOC:mtg_apoptosis","PMID:14569084","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid cell apoptotic process","termid":"GO:0033032"},{"relation_name":"regulates","term_name":"erythrocyte apoptotic process","termid":"GO:1902217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of erythrocyte apoptotic process","synonyms":[{"name":"regulation of RBC apoptosis","type":"narrow"},{"name":"regulation of RBC apoptotic process","type":"exact"},{"name":"regulation of erythrocyte apoptosis","type":"narrow"},{"name":"regulation of red blood cell apoptosis","type":"narrow"},{"name":"regulation of red blood cell apoptotic process","type":"exact"}],"termid":"GO:1902250"}


id: PBO:0064091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PITPNM2 antisense RNA 1","termid":"PBO:0064091"}


id: PBO:0076593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 14","termid":"PBO:0076593"}


id: GO:0021917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of unspecified motor neurons to specific motor neuron cell along the anterior-posterior axis of the spinal cord and their capacity to differentiate into specific motor neurons.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate commitment","termid":"GO:0048663"},{"relation_name":"part_of","term_name":"somatic motor neuron differentiation","termid":"GO:0021523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic motor neuron fate commitment","termid":"GO:0021917"}


id: PBO:0091911
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiotic Coiled-coil Protein","termid":"PBO:0091911"}


id: GO:0019679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving propionate that occur in the methylcitrate cycle.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propionate metabolic process","termid":"GO:0019541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"propionate metabolic process, methylcitrate cycle","secondary_identifiers":["MetaCyc:PWY0-42"],"synonyms":[{"name":"propionate metabolism, methylcitrate cycle","type":"exact"}],"termid":"GO:0019679"}


id: PBO:0067258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 332, pseudogene","termid":"PBO:0067258"}


id: PR:O14356
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tor1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 3-kinase tor1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.10c","synonyms":[{"name":"PI3-kinase tor1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PI3K tor1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PtdIns-3-kinase tor1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tor1","type":"exact"}],"termid":"PR:O14356"}


id: GO:0102889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = beta-elemene + diphosphoric acid.","definition_xrefs":["MetaCyc:RXN-8432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"beta-elemene synthase activity","termid":"GO:0102889"}


id: PBO:0041654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit beta 4","termid":"PBO:0041654"}


id: GO:0043083
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The narrow gap that separates the presynaptic and postsynaptic membranes, into which neurotransmitter is released.","definition_xrefs":["PMID:30784960","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"synaptic cleft","secondary_identifiers":["NIF_Subcellular:sao243541954"],"termid":"GO:0043083"}


id: PR:O43026
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gpd3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.12","synonyms":[{"name":"GAPDH 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gpd3","type":"exact"}],"termid":"PR:O43026"}


id: MONDO:0008236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phlebectasia of lips","secondary_identifiers":["MEDGEN:356962","MESH:C566806","OMIM:171450","UMLS:C1868391"],"synonyms":[{"name":"phlebectasia of lips","type":"exact"}],"termid":"MONDO:0008236","xrefs":{"Monarch":{"xref_id":"0008236"}}}


id: PBO:0043618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COMM domain containing 7","termid":"PBO:0043618"}


id: MONDO:1010082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Evans syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune thrombocytopenia, non-human animal","termid":"MONDO:1010069"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"},{"relation_name":"is_a","term_name":"autoimmune hemolytic anemia, non-human animal","termid":"MONDO:1011406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Evans syndrome, non-human animal","secondary_identifiers":["OMIA:001286"],"termid":"MONDO:1010082","xrefs":{"Monarch":{"xref_id":"1010082"}}}


id: PBO:0031066
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination_with_normal,_unseptated_germ_tube_morphology","termid":"PBO:0031066"}


id: GO:0015827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of tryptophan, 2-amino-3-(1H-indol-3-yl)propanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"},{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"aromatic amino acid transport","termid":"GO:0015801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"tryptophan transport","synonyms":[{"name":"L-tryptophan transport","type":"narrow"}],"termid":"GO:0015827"}


id: MONDO:0004979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bronchial disease that is characterized by chronic inflammation and narrowing of the airways, which is caused by a combination of environmental and genetic factors resulting in recurring periods of wheezing (a whistling sound while breathing), chest tightness, shortness of breath, mucus production and coughing. The symptoms appear due to a variety of triggers such as allergens, irritants, respiratory infections, weather changes, exercise, stress, reflux disease, medications, foods and emotional anxiety.","definition_xrefs":["EFO:0000270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bronchial disorder","termid":"MONDO:0001358"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asthma","secondary_identifiers":["MEDGEN:2109","ICD10CM:J45","SCTID:31387002","MESH:D001249","HP:0002099","DOID:2841","NCIT:C28397","UMLS:C0004096","ICD9:493","ICD9:493.9","ICD9:493.81","icd11.foundation:1656445230"],"synonyms":[{"name":"bronchial hyperreactivity","type":"exact"},{"name":"chronic obstructive asthma","type":"narrow"},{"name":"chronic obstructive asthma with acute exacerbation","type":"narrow"},{"name":"chronic obstructive asthma with status asthmaticus","type":"narrow"},{"name":"exercise induced asthma","type":"narrow"},{"name":"exercise-induced asthma","type":"narrow"}],"termid":"MONDO:0004979","xrefs":{"Monarch":{"xref_id":"0004979"}}}


id: PBO:0060374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYOZ3 antisense RNA 1","termid":"PBO:0060374"}


id: GO:1904635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glomerular visceral epithelial cell apoptotic process.","definition_xrefs":["PMID:23692924","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell apoptotic process","termid":"GO:1904037"},{"relation_name":"is_a","term_name":"regulation of podocyte apoptotic process","termid":"GO:1904633"},{"relation_name":"positively_regulates","term_name":"podocyte apoptotic process","termid":"GO:1903210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of podocyte apoptotic process","synonyms":[{"name":"activation of glomerular podocyte apoptosis","type":"narrow"},{"name":"activation of glomerular podocyte apoptotic process","type":"narrow"},{"name":"activation of glomerular visceral epithelial cell apoptosis","type":"narrow"},{"name":"activation of glomerular visceral epithelial cell apoptotic process","type":"narrow"},{"name":"activation of podocyte apoptosis","type":"narrow"},{"name":"activation of podocyte apoptotic process","type":"narrow"},{"name":"positive regulation of glomerular podocyte apoptosis","type":"narrow"},{"name":"positive regulation of glomerular podocyte apoptotic process","type":"exact"},{"name":"positive regulation of glomerular visceral epithelial cell apoptosis","type":"narrow"},{"name":"positive regulation of glomerular visceral epithelial cell apoptotic process","type":"exact"},{"name":"positive regulation of podocyte apoptosis","type":"narrow"},{"name":"up regulation of glomerular podocyte apoptosis","type":"narrow"},{"name":"up regulation of glomerular podocyte apoptotic process","type":"exact"},{"name":"up regulation of glomerular visceral epithelial cell apoptosis","type":"narrow"},{"name":"up regulation of glomerular visceral epithelial cell apoptotic process","type":"exact"},{"name":"up regulation of podocyte apoptosis","type":"narrow"},{"name":"up regulation of podocyte apoptotic process","type":"exact"},{"name":"up-regulation of glomerular podocyte apoptosis","type":"narrow"},{"name":"up-regulation of glomerular podocyte apoptotic process","type":"exact"},{"name":"up-regulation of glomerular visceral epithelial cell apoptosis","type":"narrow"},{"name":"up-regulation of glomerular visceral epithelial cell apoptotic process","type":"exact"},{"name":"up-regulation of podocyte apoptosis","type":"narrow"},{"name":"up-regulation of podocyte apoptotic process","type":"exact"},{"name":"upregulation of glomerular podocyte apoptosis","type":"narrow"},{"name":"upregulation of glomerular podocyte apoptotic process","type":"exact"},{"name":"upregulation of glomerular visceral epithelial cell apoptosis","type":"narrow"},{"name":"upregulation of glomerular visceral epithelial cell apoptotic process","type":"exact"},{"name":"upregulation of podocyte apoptosis","type":"narrow"},{"name":"upregulation of podocyte apoptotic process","type":"exact"}],"termid":"GO:1904635"}


id: GO:0048876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of the internal steady state of the amount of a chemical at the level of the retina.","definition_xrefs":["GOC:isa_complete"],"gene_count":0,"genotype_count":0,"name":"obsolete chemical homeostasis within retina (obsolete GO:0048876)","termid":"GO:0048876"}


id: GO:0099142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when ATP has been bound by the channel complex or one of its constituent parts on the intracellular side of the plasma membrane.","definition_xrefs":["PMID:9755289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly ligand-gated monoatomic ion channel activity","termid":"GO:0005217"},{"relation_name":"is_a","term_name":"ATP-gated ion channel activity","termid":"GO:0035381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"intracellularly ATP-gated ion channel activity","termid":"GO:0099142"}


id: PBO:0056205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member A13, pseudogene","termid":"PBO:0056205"}


id: PBO:0042916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CF transmembrane conductance regulator","termid":"PBO:0042916"}


id: GO:0062179
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydroxylation of C-23 of any form of vitamin D.","definition_xrefs":["PMID:30205156","PMID:22100522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"vitamin D 23-hydroxylase activity","termid":"GO:0062179"}


id: GO:0003193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the pulmonary valve from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve formation","termid":"GO:0003188"},{"relation_name":"part_of","term_name":"pulmonary valve morphogenesis","termid":"GO:0003184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pulmonary valve formation","termid":"GO:0003193"}


id: MONDO:0008336
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pterygium colli, isolated","secondary_identifiers":["MESH:C566741","MEDGEN:356780","OMIM:177990","UMLS:C1867442"],"synonyms":[{"name":"pterygium colli, isolated","type":"exact"}],"termid":"MONDO:0008336","xrefs":{"Monarch":{"xref_id":"0008336"}}}


id: GO:0071670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a smooth muscle cell in response to an external stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle cell migration","termid":"GO:0014909"},{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle cell chemotaxis","termid":"GO:0071670"}


id: MONDO:0044964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mucoepidermoid carcinoma arising from the minor salivary glands in the oral cavity. It is often asymptomatic and detected during a routine dental examination.","definition_xrefs":["NCIT:C8177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucoepidermoid carcinoma","termid":"MONDO:0003036"},{"relation_name":"is_a","term_name":"oral cavity carcinoma","termid":"MONDO:0044925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"oral cavity mucoepidermoid carcinoma","secondary_identifiers":["UMLS:C0280309","MEDGEN:83629"],"synonyms":[{"name":"mucoepidermoid carcinoma of oral cavity","type":"exact"},{"name":"mucoepidermoid carcinoma of the oral cavity","type":"exact"},{"name":"oral cavity mucoepidermoid cancer","type":"exact"},{"name":"oral cavity mucoepidermoid carcinoma","type":"exact"}],"termid":"MONDO:0044964","xrefs":{"Monarch":{"xref_id":"0044964"}}}


id: PBO:0027033
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_localization_to_mitotic_spindle_midzone","termid":"PBO:0027033"}


id: PBO:0080409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS37C subunit of ESCRT-I","termid":"PBO:0080409"}


id: MONDO:0000002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 46,XX sex reversal (obsolete MONDO:0000002)","termid":"MONDO:0000002","xrefs":{"Monarch":{"xref_id":"0000002"}}}


id: PBO:0004723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphate isomerase (predicted)","termid":"PBO:0004723"}


id: MONDO:0016433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dysmorphism-short stature-deafness-disorder of sex development syndrome is characterized by dysmorphism (including facial asymmetry, arched eyebrows, hypertelorism, broad and flat nasal bridge, microtia, small nose with anteverted nostrils, micrognathia), deafness, cleft palate, male pseudohermaphroditism, and growth and psychomotor retardation. It has been described in two siblings. It is transmitted as an autosomal recessive trait.","definition_xrefs":["Orphanet:2282"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"46,XY disorder of sex development","termid":"MONDO:0020040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysmorphism-short stature-deafness-disorder of sex development syndrome","secondary_identifiers":["UMLS:C4518561","GARD:18764","MEDGEN:1383129"],"synonyms":[{"name":"Dysmorphism-short stature-deafness-pseudohermaphroditism syndrome","type":"exact"}],"termid":"MONDO:0016433","xrefs":{"Monarch":{"xref_id":"0016433"}}}


id: PBO:0017809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin H transmembrane transporter Vht1","termid":"PBO:0017809"}


id: GO:0030907
data:
  {"annotated_genes":["SJAG_04381","SJAG_01157","SJAG_00987","SJAG_01728","SJAG_00693","SJAG_02810"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92775,103456,106216,107716,108673,111408],"is_not":false,"summary":null,"term":"GO:0030907"}]},"cv_name":"cellular_component","definition":"A protein complex that binds to the Mlu1 cell cycle box (MCB) promoter element, consensus sequence ACGCGN, and is involved in regulation of transcription during the G1/S transition of the cell cycle. In Saccharomyces, the complex contains a heterodimer of the DNA binding protein Mbp1p and the activator Swi6p, and is associated with additional proteins known as Nrm1p, Msa1p, and Msa2p; in Schizosaccharomyces the complex contains Res1p, Res2p, and Cdc10p.","definition_xrefs":["GOC:mah","PMID:15838511","PMID:18160399","PMID:9343385","PMID:11206552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00693":null,"SJAG_00987":null,"SJAG_01157":null,"SJAG_01728":null,"SJAG_02810":null,"SJAG_04381":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MBF transcription complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DSC1 transcription factor complex","type":"exact"},{"name":"MBF","type":"exact"},{"name":"Mlu1-box binding factor","type":"exact"}],"termid":"GO:0030907","terms_by_termid":{"GO:0030907":null}}


id: PBO:0031268
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_stress","termid":"PBO:0031268"}


id: PBO:0048069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 20","termid":"PBO:0048069"}


id: PBO:0054194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1569","termid":"PBO:0054194"}


id: GO:0120166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of producing fruiting body precursors, called protoperithecia. Protoperitheicium is a spherical structure that is formed in the sexual phase of ascomycetous fungi such as Neurospora crassa and Sordaria macrospora. Protoperithecium is formed by the enveloping of ascogonia cells by sterile hyphae and it develops into perithecium.","definition_xrefs":["PMID:4410944","PMID:6235212","PMID:20739093","DOI:10.1007/978-3-642-00286-1_2","PMID:125266","PMID:25311923","PMID:6235211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive fruiting body development","termid":"GO:0030582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protoperithecium formation","termid":"GO:0120166"}


id: PBO:0004044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein Rad60","termid":"PBO:0004044"}


id: GO:0008140
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cAMP response element binding protein (a CREB protein).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription factor binding","termid":"GO:0140297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cAMP response element binding protein binding","synonyms":[{"name":"3',5' cAMP response element binding protein binding","type":"exact"},{"name":"3',5'-cAMP response element binding protein binding","type":"exact"},{"name":"CBP","type":"related"},{"name":"CREB binding","type":"exact"},{"name":"adenosine 3',5'-cyclophosphate response element binding protein binding","type":"exact"},{"name":"cyclic AMP response element binding protein binding","type":"exact"}],"termid":"GO:0008140"}


id: PBO:0031420
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_DNA_damage_checkpoint","termid":"PBO:0031420"}


id: GO:0001753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Development of a photoreceptor, a receptor that responds to light, in the adult Drosophila eye.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete adult eye photoreceptor development (sensu Drosophila) (obsolete GO:0001753)","synonyms":[{"name":"adult eye photoreceptor development (sensu Drosophila)","type":"exact"}],"termid":"GO:0001753"}


id: PR:Q09732
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sister chromatid cohesion protein DCC1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00164","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sister chromatid cohesion protein dcc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.15c","secondary_identifiers":["UniProtKB:Q09732"],"synonyms":[{"name":"Spom972h-DSCC1","type":"exact"},{"name":"defective in sister chromatid cohesion protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09732"}


id: GO:1901577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of alkane biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"regulates","term_name":"alkane biosynthetic process","termid":"GO:0043447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of alkane biosynthetic process","synonyms":[{"name":"regulation of alkane anabolism","type":"exact"},{"name":"regulation of alkane biosynthesis","type":"exact"},{"name":"regulation of alkane formation","type":"exact"},{"name":"regulation of alkane synthesis","type":"exact"}],"termid":"GO:1901577"}


id: MONDO:0018579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disorder of ketone body transport (obsolete MONDO:0018579)","secondary_identifiers":["Orphanet:438072"],"synonyms":[{"name":"disorder of keton body transport","type":"related"},{"name":"disorder of ketone body transport","type":"exact"}],"termid":"MONDO:0018579","xrefs":{"Monarch":{"xref_id":"0018579"}}}


id: GO:0102287
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-coumaryl-CoA + 3-oxooctanoyl-CoA + H2O = 4-coumaroylhexanoylmethane + 2 coenzyme A + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-coumaroylhexanoylmethane synthase activity (obsolete GO:0102287)","termid":"GO:0102287"}


id: MONDO:0800422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cirrhosis, noncryptogenic, susceptibility to","secondary_identifiers":["UMLS:C1835713","MEDGEN:324345"],"termid":"MONDO:0800422","xrefs":{"Monarch":{"xref_id":"0800422"}}}


id: PBO:0089866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA machinery CIA1/CFD1 fusion protein","termid":"PBO:0089866"}


id: PBO:0087068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L33B; rpl33b null mutant exhibits normal growth while rpl33a rpl33b double null mutant is inviable; homologous to mammalian ribosomal protein L35A, no bacterial homolog; RPL33B has a paralog, RPL33A, that arose from the whole genome duplication","termid":"PBO:0087068"}


id: GO:0150155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-34 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:aruk","PMID:26754294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-34 production","termid":"GO:0150155"}


id: GO:0045110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the bundles of intermediate filaments. Intermediate filament-associated proteins (IFAPs) cross-link intermediate filaments with one another, forming a bundle or a network, and with other cell structures, including the plasma membrane. The organization of intermediate filaments and their supportive function in various cells types depends in large part on their linkage to other cell structures via IFAPs.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"intermediate filament organization","termid":"GO:0045109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"intermediate filament bundle assembly","synonyms":[{"name":"tonofilament assembly","type":"narrow"}],"termid":"GO:0045110"}


id: GO:0032627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-23 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-23 production","secondary_identifiers":["GO:0072621","GO:0042240"],"synonyms":[{"name":"IL-23 production","type":"exact"},{"name":"interleukin-23 biosynthetic process","type":"narrow"},{"name":"interleukin-23 secretion","type":"narrow"}],"termid":"GO:0032627"}


id: SO:0002087
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non functional descendant of the coding portion of a coding transcript, part of a pseudogene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogenic_region","termid":"SO:0000462"},{"relation_name":"part_of","term_name":"pseudogenic_transcript","termid":"SO:0000516"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogenic_CDS","synonyms":[{"name":"INSDC_feature:CDS","type":"broad"},{"name":"INSDC_qualifier:pseudo","type":"exact"},{"name":"pseudogenic CDS","type":"exact"}],"termid":"SO:0002087"}


id: MONDO:0009144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ebstein's malformation is a rare congenital cardiac anomaly characterized by rotational displacement of the septal and inferior leaflets of the tricuspid valve such that they are hinged within the right ventricle, rather than as expected at the atrioventricular junction.","definition_xrefs":["Orphanet:1880"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"aortic disorder","termid":"MONDO:0005561"},{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic cardiac malformation (obsolete MONDO:0018797)","termid":"MONDO:0018797"},{"relation_name":"is_a","term_name":"congenital tricuspid malformation","termid":"MONDO:0020289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Ebstein anomaly","secondary_identifiers":["ICD9:746.2","DOID:14289","GARD:6313","MEDGEN:4435","icd11.foundation:307157712","MESH:D004437","NANDO:1200711","NANDO:2100080","NANDO:2200260","NCIT:C84681","OMIM:224700","UMLS:C0013481","MedDRA:10014075","EFO:0007244"],"synonyms":[{"name":"Ebstein anomaly","type":"exact"},{"name":"Ebstein anomaly (disease)","type":"exact"},{"name":"Ebstein anomaly of the tricuspid valve","type":"exact"},{"name":"Ebstein malformation","type":"related"},{"name":"Ebstein's anomaly","type":"exact"},{"name":"Ebstein's anomaly (disorder) [ambiguous]","type":"exact"},{"name":"Ebstein's anomaly of common atrioventricular valve","type":"exact"},{"name":"Ebstein's anomaly of right atrioventricular valve","type":"exact"},{"name":"Ebstein's anomaly of tricuspid valve","type":"exact"},{"name":"Ebstein's malformation","type":"related"}],"termid":"MONDO:0009144","xrefs":{"Monarch":{"xref_id":"0009144"}}}


id: MONDO:1012114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypomyelinogenesis, non-human animal","termid":"MONDO:1011845"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypomyelinogenesis, dog","secondary_identifiers":["OMIA:000527-9615"],"termid":"MONDO:1012114","xrefs":{"Monarch":{"xref_id":"1012114"}}}


id: PBO:0078648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 2-4","termid":"PBO:0078648"}


id: GO:0160031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an endoplasmic reticulum membrane is synthesized, aggregates, and bonds together.","definition_xrefs":["PMID:24373967","PMID:34617598","PMID:19825355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane biogenesis","termid":"GO:0044091"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane organization","termid":"GO:0090158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0044085"],"is_obsolete":false,"name":"endoplasmic reticulum membrane biogenesis","synonyms":[{"name":"ER membrane biogenesis","type":"exact"}],"termid":"GO:0160031"}


id: GO:0034138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to the endolysosomal toll-like receptor 3.","definition_xrefs":["GOC:add","PMID:17328678","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endolysosomal toll-like receptor signaling pathway","termid":"GO:0140894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"toll-like receptor 3 signaling pathway","secondary_identifiers":["Reactome:R-HSA-168164"],"synonyms":[{"name":"TLR3 signaling pathway","type":"exact"},{"name":"toll-like receptor 3 signalling pathway","type":"exact"}],"termid":"GO:0034138"}


id: FYPO:0004545
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of proteasome-mediated, ubiquitin-dependent protein degradation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein degradation during vegetative growth","termid":"FYPO:0000846"},{"relation_name":"is_a","term_name":"decreased proteolysis during vegetative growth","termid":"FYPO:0005443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased proteasomal ubiquitin-dependent protein degradation","synonyms":[{"name":"decreased proteasomal ubiquitin-dependent protein breakdown","type":"exact"},{"name":"decreased proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"decreased proteasomal ubiquitin-dependent protein catabolism","type":"exact"},{"name":"decreased proteasomal ubiquitin-dependent protein degradation during mitotic cell cycle","type":"related"},{"name":"decreased proteasomal ubiquitin-dependent protein degradation during vegetative growth","type":"exact"},{"name":"decreased proteasome-mediated ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"reduced proteasomal ubiquitin-dependent protein degradation","type":"exact"}],"termid":"FYPO:0004545"}


id: PBO:0091077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall and secondary septum 1,6 branched 1,3-beta-glucan synthase catalytic subunit Bgs4","termid":"PBO:0091077"}


id: PBO:0000541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor Alp41","termid":"PBO:0000541"}


id: MONDO:0017654
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non progressive epilepsy and/or ataxia with myoclonus as a major feature (obsolete MONDO:0017654)","secondary_identifiers":["Orphanet:306759"],"termid":"MONDO:0017654","xrefs":{"Monarch":{"xref_id":"0017654"}}}


id: PBO:0073924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC16A12 antisense RNA 1","termid":"PBO:0073924"}


id: PBO:0047783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXD3 antisense RNA 1","termid":"PBO:0047783"}


id: PBO:0018138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMS complex subunit, Spc105/KNL-1 family member, blinkin, Spc7","termid":"PBO:0018138"}


id: MONDO:0009149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ectodermal dysplasia-intellectual disability-central nervous system malformation syndrome is a rare, multiple developmental anomalies syndrome characterized by the triad of ectodermal dysplasia (mostly hypohidrotic with dry skin and reduced sweating and sparse, fair scalp hair, eyebrows and eyelashes), severe intellectual disability and variable central nervous system anomalies (cerebellar hypoplasia, dilatation of ventricles, corpus callosum agenesis, Dandy-Walker malformation). Distinct craniofacial dysmorphism with macrocephaly, frontal bossing, midfacial hypoplasia and high arched or cleft palate, as well as cryptorchidism, feeding difficulties and hypotonia, are associated. There have been no further descriptions in the literature since 1998.","definition_xrefs":["Orphanet:1812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia-intellectual disability-central nervous system malformation syndrome","secondary_identifiers":["MEDGEN:347363","MESH:C565605","GARD:16578","OMIM:225040","UMLS:C1857053"],"synonyms":[{"name":"ectodermal dysplasia, hypohidrotic, with hypothyroidism and agenesis of the corpus callosum","type":"related"}],"termid":"MONDO:0009149","xrefs":{"Monarch":{"xref_id":"0009149"}}}


id: GO:0035271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Progression of the ring gland over time, from its formation to a mature structure. The ring gland is a neuroendocrine organ found in higher Dipterans, which is composed of the prothoracic gland, the corpus allatum, and the corpora cardiacum. The ring gland is the site of production and release of ecdysteroids and juvenile hormones.","definition_xrefs":["PMID:9584098","GOC:bf","PMID:11223816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"endocrine system development","termid":"GO:0035270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ring gland development","termid":"GO:0035271"}


id: GO:0004327
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: formaldehyde + glutathione + NAD+ = S-formylglutathione + NADH + H+.","definition_xrefs":["EC:1.2.1.1"],"gene_count":0,"genotype_count":0,"name":"obsolete formaldehyde dehydrogenase (glutathione) activity (obsolete GO:0004327)","synonyms":[{"name":"formaldehyde dehydrogenase (glutathione) activity","type":"exact"}],"termid":"GO:0004327"}


id: MONDO:0033947
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary angioedema with normal C1Inh (obsolete MONDO:0033947)","termid":"MONDO:0033947","xrefs":{"Monarch":{"xref_id":"0033947"}}}


id: FYPO:0006523
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after entering stationary phase following arrest at the mitotic G2/M phase transition of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:11598020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"loss of viability in stationary phase","termid":"FYPO:0000245"},{"relation_name":"is_a","term_name":"loss of viability following cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0006522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"loss of viability in stationary phase following entry from mitotic G2 phase","synonyms":[{"name":"decreased viability in stationary phase following entry from mitotic G2 phase","type":"exact"},{"name":"loss of cell population viability in stationary phase following entry from mitotic G2 phase","type":"exact"},{"name":"loss of viability following mitotic G2 arrest and stationary phase entry","type":"exact"},{"name":"loss of viability in stationary phase following entry from mitotic G2/M phase transition","type":"exact"},{"name":"loss of viability of following entry into stationary phase from mitotic G2 phase","type":"exact"},{"name":"reduced viability in stationary phase following entry from mitotic G2 phase","type":"related"}],"termid":"FYPO:0006523"}


id: PBO:0000573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup45","termid":"PBO:0000573"}


id: FYPO:0006551
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119112,119114],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004982"},{"annotations":[119113,119115],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004573"}],"single_locus_phenotype":[{"annotations":[119099],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004205"},{"annotations":[119100],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004982"},{"annotations":[118663,118665,118664],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001327"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which gene expression is abnormal. One or more parts of gene expression, such as transcription or translation, may be affected, and all genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah","GO:0010467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression phenotype","termid":"FYPO:0000142"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_02621":null,"SJAG_03118":null,"SJAG_03198":null,"SJAG_03351":null,"SJAG_03575":null,"SJAG_03689":null},"genotype_count":6,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03118","SJAG_03689","SJAG_02621"],"name":"abnormal gene expression","references_by_uniquename":{"PMID:23786411":null,"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03351","SJAG_03575","SJAG_01956","SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"termid":"FYPO:0006551","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0001327":null,"FYPO:0004205":null,"FYPO:0004573":null,"FYPO:0004982":null,"FYPO_EXT:0000001":null}}


id: FYPO:0003641
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of adenylate kinase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal adenylate kinase activity","termid":"FYPO:0003640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000654","FYPO:0005447","FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"increased adenylate kinase activity","termid":"FYPO:0003641"}


id: PBO:0055667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and Ig domain containing 3","termid":"PBO:0055667"}


id: PBO:0028055
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_silencing_at_subtelomere","termid":"PBO:0028055"}


id: FYPO:0000217
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which DNA replication is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolism phenotype","termid":"FYPO:0000293"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000293"],"is_obsolete":false,"name":"abnormal DNA replication","synonyms":[{"name":"abnormal DNA-dependent DNA replication","type":"exact"}],"termid":"FYPO:0000217"}


id: PBO:0057751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1910","termid":"PBO:0057751"}


id: PATO:0000254
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000254 vibrissae reflex (obsolete PATO:0000254)","termid":"PATO:0000254"}


id: PBO:0004561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Cwf29","termid":"PBO:0004561"}


id: PBO:0049852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT domain E3 ubiquitin protein ligase 1","termid":"PBO:0049852"}


id: FYPO:0005577
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins occurs to a lower extent than normal during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation","termid":"FYPO:0002679"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during meiotic cell cycle","termid":"FYPO:0006765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein phosphorylation during meiotic cell cycle","synonyms":[{"name":"reduced protein phosphorylation during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0005577"}


id: GO:0051127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of actin nucleation, the initial step in the formation of an actin filament in which actin monomers combine to form a new filament.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin nucleation","termid":"GO:0051125"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"positive regulation of supramolecular fiber organization","termid":"GO:1902905"},{"relation_name":"positively_regulates","term_name":"actin nucleation","termid":"GO:0045010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"positive regulation of actin nucleation","synonyms":[{"name":"activation of actin nucleation","type":"narrow"},{"name":"stimulation of actin nucleation","type":"narrow"},{"name":"up regulation of actin nucleation","type":"exact"},{"name":"up-regulation of actin nucleation","type":"exact"},{"name":"upregulation of actin nucleation","type":"exact"}],"termid":"GO:0051127"}


id: PBO:0061782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OCIA domain containing 2 pseudogene 1","termid":"PBO:0061782"}


id: GO:0035583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Confining TGFbeta to the extracellular matrix (ECM) such that it is separated from other components of the signaling pathway, including its cell surface receptor. TGFbeta is secreted as part of a latent complex that is targeted to the extracellular matrix through latent-TGFbeta-binding protein (LTBP)-mediated association with matrix proteins.","definition_xrefs":["PMID:20855508","PMID:12482908","GOC:BHF","GOC:bf","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transforming growth factor beta receptor signaling pathway","termid":"GO:0030512"},{"relation_name":"is_a","term_name":"sequestering of extracellular ligand from receptor","termid":"GO:0035581"},{"relation_name":"is_a","term_name":"maintenance of protein location in extracellular region","termid":"GO:0071694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"sequestering of TGFbeta in extracellular matrix","synonyms":[{"name":"negative regulation of transforming growth factor beta receptor signaling pathway by extracellular matrix sequestering of TGFbeta","type":"exact"},{"name":"negative regulation of transforming growth factor beta receptor signalling pathway by extracellular matrix sequestering of TGFbeta","type":"exact"},{"name":"sequestering of TGFbeta LLC in extracellular matrix","type":"exact"},{"name":"sequestering of TGFbeta large latency complex in extracellular matrix","type":"exact"}],"termid":"GO:0035583"}


id: PBO:0028033
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_curved_elongated_mononucleate_vegetative_cell","termid":"PBO:0028033"}


id: MONDO:0020661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An undifferentiated soft tissue sarcoma characterized by the presence of uniform round or ovoid malignant cells with a high nuclear to cytoplasmic ratio.","definition_xrefs":["NCIT:C121799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"undifferentiated round cell sarcoma","secondary_identifiers":["MEDGEN:885673","UMLS:C4048304"],"synonyms":[{"name":"undifferentiated round cell sarcoma","type":"exact"}],"termid":"MONDO:0020661","xrefs":{"Monarch":{"xref_id":"0020661"}}}


id: GO:0042058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epidermal growth factor receptor signaling pathway activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ERBB signaling pathway","termid":"GO:1901184"},{"relation_name":"regulates","term_name":"epidermal growth factor receptor signaling pathway","termid":"GO:0007173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of epidermal growth factor receptor signaling pathway","synonyms":[{"name":"regulation of EGF receptor signaling pathway","type":"exact"},{"name":"regulation of EGF receptor signalling pathway","type":"exact"},{"name":"regulation of EGFR signaling pathway","type":"exact"}],"termid":"GO:0042058"}


id: GO:0031245
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the cell outer membrane consisting of gene products and protein complexes that are loosely bound to periplasmic surface, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of cell outer membrane","termid":"GO:0031244"},{"relation_name":"part_of","term_name":"periplasmic side of cell outer membrane","termid":"GO:0031241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrinsic component of periplasmic side of cell outer membrane","synonyms":[{"name":"extrinsic to internal leaflet of cell outer membrane","type":"narrow"},{"name":"extrinsic to internal side of cell outer membrane","type":"exact"},{"name":"extrinsic to internal side of outer membrane","type":"exact"},{"name":"extrinsic to periplasmic side of cell outer membrane","type":"exact"}],"termid":"GO:0031245"}


id: GO:0034528
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-carboxy-2-hydroxy-8-carboxychromene = 2-hydroxy-3-carboxybenzalpyruvate.","definition_xrefs":["UM-BBD_reactionID:r0791"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-carboxy-2-hydroxy-8-carboxychromene isomerase activity (obsolete GO:0034528)","termid":"GO:0034528"}


id: PBO:0116301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the TTT complex and the telomere cap complex; subunit of the TTT Hsp90 cochaperone complex that is involved in chromatin remodeling and telomeric chromatin regulation, and  involved in chromatin remodeling and the telomere cap complex; DNA-binding protein specific to single-stranded yeast telomeric DNA repeats; required for telomere length regulation and telomere position effect; involved in the stability or biogenesis of PIKKs such as TORC1","termid":"PBO:0116301"}


id: PBO:0087692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC); contributes to nucleocytoplasmic transport and NPC biogenesis and is involved in establishment of a normal nucleocytoplasmic concentration gradient of the GTPase Gsp1p; also plays roles in several processes that may require localization of genes or chromosomes at the nuclear periphery, including double-strand break repair, transcription and chromatin silencing; homologous to human NUP85 aka NUP75","termid":"PBO:0087692"}


id: GO:0032869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to insulin","termid":"GO:0032868"},{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to insulin stimulus","termid":"GO:0032869"}


id: GO:1904537
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101873],"is_not":false,"summary":null,"term":"GO:1904537"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic telomere tethering at nuclear periphery.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22959349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of mitotic telomere tethering at nuclear periphery","termid":"GO:1904536"},{"relation_name":"negatively_regulates","term_name":"mitotic telomere tethering at nuclear periphery","termid":"GO:0044820"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitotic telomere tethering at nuclear periphery","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of mitotic telomere tethering at nuclear periphery","type":"exact"},{"name":"down-regulation of mitotic telomere tethering at nuclear periphery","type":"exact"},{"name":"downregulation of mitotic telomere tethering at nuclear periphery","type":"exact"},{"name":"inhibition of mitotic telomere tethering at nuclear periphery","type":"narrow"}],"termid":"GO:1904537","terms_by_termid":{"GO:1904537":null}}


id: PBO:0064209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasminogen activator, urokinase receptor","termid":"PBO:0064209"}


id: PATO:0001805
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A texture quality inhering in a bearer by virtue of the bearer's formed or tending to form flakes or thin, crisp fragments.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"texture","termid":"PATO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flaky","termid":"PATO:0001805"}


id: MONDO:0013270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"atypical Rett syndrome","termid":"MONDO:0017746"},{"relation_name":"is_a","term_name":"FOXG1 disorder","termid":"MONDO:0100040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"Rett syndrome, congenital variant","secondary_identifiers":["MEDGEN:462055","GARD:15664","OMIM:613454","UMLS:C3150705","NCIT:C176903"],"synonyms":[{"name":"Rett syndrome, congenital variant","type":"exact"}],"termid":"MONDO:0013270","xrefs":{"Monarch":{"xref_id":"0013270"}}}


id: MONDO:0004671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the penis.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous carcinoma in situ","termid":"MONDO:0004693"},{"relation_name":"is_a","term_name":"squamous cell carcinoma of penis","termid":"MONDO:0018352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"penis carcinoma in situ","secondary_identifiers":["NCIT:C27790","UMLS:C0154089","ICD9:233.5","SCTID:398768004","ICDO:8080/2","SCTID:398831006","DOID:8872","MEDGEN:102309"],"synonyms":[{"name":"Bowen disease of the penis","type":"exact"},{"name":"Bowen's disease of penis","type":"exact"},{"name":"Bowen's disease of the penis","type":"exact"},{"name":"Queyrat erythroplasia","type":"exact"},{"name":"Queyrat's erythroplasia","type":"exact"},{"name":"carcinoma in situ of penis","type":"exact"},{"name":"carcinoma in situ of the penis","type":"exact"},{"name":"erythroplasia of Queyrat","type":"exact"},{"name":"grade III penile intraepithelial neoplasia","type":"exact"},{"name":"grade III squamous intraepithelial lesion of penis","type":"exact"},{"name":"grade III squamous intraepithelial lesion of the penis","type":"exact"},{"name":"penile carcinoma in situ","type":"exact"},{"name":"penile carcinoma in situ aJCC v7","type":"exact"},{"name":"penile intraepithelial neoplasia grade III","type":"exact"},{"name":"penis in situ carcinoma","type":"exact"},{"name":"stage 0 penile carcinoma in situ","type":"exact"},{"name":"stage 0 penis carcinoma","type":"exact"}],"termid":"MONDO:0004671","xrefs":{"Monarch":{"xref_id":"0004671"}}}


id: GO:0061420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of deprivation of biotin.","definition_xrefs":["PMID:16533810","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to biotin starvation (obsolete GO:0061420)","termid":"GO:0061420"}


id: MONDO:0012067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inherited susceptibility to asthma in which the cause of the disease is a mutation in the NPSR1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to asthma","termid":"MONDO:0010940"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asthma-related traits, susceptibility to, 2","secondary_identifiers":["OMIM:608584","UMLS:C1837811","MEDGEN:324885"],"synonyms":[{"name":"ASRT2","type":"related"},{"name":"NPSR1 inherited susceptibility to asthma","type":"exact"},{"name":"asthma, susceptibility to, 2","type":"exact"},{"name":"asthma-related traits, susceptibility to, 2","type":"exact"},{"name":"asthma-related traits, susceptibility to, type 2","type":"exact"},{"name":"inherited susceptibility to asthma caused by mutation in NPSR1","type":"exact"}],"termid":"MONDO:0012067","xrefs":{"Monarch":{"xref_id":"0012067"}}}


id: PBO:0065130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cGMP-dependent 2","termid":"PBO:0065130"}


id: SO:0001674
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved region about 24-bp upstream of the start point of bacterial transcription units, involved with sigma factor 54.","definition_xrefs":["PMID:18331472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"part_of","term_name":"bacterial_RNApol_promoter_sigma54_element","termid":"SO:0001672"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus_24_signal","synonyms":[{"name":"minus 24 signal","type":"related"}],"termid":"SO:0001674"}


id: PBO:0005601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-ubiquinone reductase complex subunit (predicted)","termid":"PBO:0005601"}


id: PBO:0030805
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_microtubule_cytoskeleton_during_vegetative_growth","termid":"PBO:0030805"}


id: GO:0002509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction in the central lymphoid organs directed at self antigens.","definition_xrefs":["GOC:jal","PMID:16460922","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central tolerance induction","termid":"GO:0002508"},{"relation_name":"is_a","term_name":"tolerance induction to self antigen","termid":"GO:0002513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central tolerance induction to self antigen","termid":"GO:0002509"}


id: MONDO:1010135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Protoporphyria that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"},{"relation_name":"is_a","term_name":"porphyria, non-human animal","termid":"MONDO:1011418"},{"relation_name":"is_a","term_name":"liver disorder, non-human animal","termid":"MONDO:1012967"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protoporphyria, non-human animal","secondary_identifiers":["OMIA:000836"],"termid":"MONDO:1010135","xrefs":{"Monarch":{"xref_id":"1010135"}}}


id: MONDO:0013411
data:
  {"annotated_genes":["SJAG_04567","SJAG_02919","SJAG_03815"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86401,86402,86403],"is_not":false,"summary":null,"term":"MONDO:0013411"}]},"cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the CRYAB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset zonular cataract","termid":"MONDO:0020379"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02919":null,"SJAG_03815":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 16 multiple types","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3808377","MESH:C565134","DOID:0110250","MEDGEN:814707","OMIM:613763"],"synonyms":[{"name":"CRYAB early-onset non-syndromic cataract","type":"exact"},{"name":"CTPP2","type":"narrow"},{"name":"CTRCT16","type":"exact"},{"name":"cataract 16, multiple types","type":"related"},{"name":"cataract, congenital lamellar","type":"related"},{"name":"cataract, posterior polar, 2","type":"related"},{"name":"early-onset non-syndromic cataract caused by mutation in CRYAB","type":"exact"},{"name":"posterior polar cataract 2","type":"narrow"}],"termid":"MONDO:0013411","terms_by_termid":{"MONDO:0013411":null},"xrefs":{"Monarch":{"xref_id":"0013411"}}}


id: MONDO:0020219
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete corneogoniodysgenesis (obsolete MONDO:0020219)","secondary_identifiers":["Orphanet:98635"],"termid":"MONDO:0020219","xrefs":{"Monarch":{"xref_id":"0020219"}}}


id: PR:Q10265
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A heat shock cognate 71 kDa protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00951","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein ssa1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.02c","secondary_identifiers":["UniProtKB:Q10265"],"synonyms":[{"name":"Spom972h-HSPA8","type":"exact"}],"termid":"PR:Q10265"}


id: PBO:0049951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxia inducible factor 1 subunit alpha inhibitor","termid":"PBO:0049951"}


id: PBO:0029038
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_glycerol_level_during_cellular_response_to_salt_stress","termid":"PBO:0029038"}


id: PBO:0005175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein Cwf23","termid":"PBO:0005175"}


id: GO:0140395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reaction: (1'S)-averantin + [reduced NADPH--hemoprotein reductase] + O2 = (1'S,5'S)-5'-hydroxyaverantin + [oxidized NADPH--hemoprotein reductase] + H2O. Involved in aflatoxin biosynthesis.","definition_xrefs":["EC:1.14.14.116","PMID:8368836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"averantin hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-9482","RHEA:35575"],"termid":"GO:0140395"}


id: MONDO:0007966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"susceptibility to uveal melanoma","termid":"MONDO:0007966","xrefs":{"Monarch":{"xref_id":"0007966"}}}


id: PBO:0074282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT2 intronic transcript 1","termid":"PBO:0074282"}


id: MONDO:0017665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic disease with myoclonus as a major feature (obsolete MONDO:0017665)","secondary_identifiers":["Orphanet:307067"],"termid":"MONDO:0017665","xrefs":{"Monarch":{"xref_id":"0017665"}}}


id: PBO:0085409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane receptor for plant antifungal osmotin; involved in zinc ion homeostasis, apoptosis; negatively regulates ZRT1 and other functionally divergent genes through CCCTC promoter motif (IzRE); modulates FET3 activity in iron-independent manner; affects gene expression by influencing balance of competition between Msn2p/Msn4p and Nrg1p/Nrg2p for binding to IzRE; transcription regulated by Zap1p, zinc, fatty acid levels; homolog of mammalian adiponectin receptor","termid":"PBO:0085409"}


id: MONDO:0009910
data:
  {"annotated_genes":["SJAG_04934"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85652],"is_not":false,"summary":null,"term":"MONDO:0009910"}]},"cv_name":"mondo","definition":"Wiedemann-Rautenstrauch syndrome is a very rare disorder with features of premature aging recognizable at birth, decreased subcutaneous fat, hypotrichosis, relative macrocephaly and dysmorphism.","definition_xrefs":["Orphanet:3455"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"hereditary lipodystrophy","termid":"MONDO:0020087"},{"relation_name":"is_a","term_name":"progeria","termid":"MONDO:0020732"},{"relation_name":"is_a","term_name":"POLR3A-related disorder","termid":"MONDO:0700276"},{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04934":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005066","MONDO:0005093","MONDO:0019303"],"is_obsolete":false,"name":"Wiedemann-Rautenstrauch syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:1852","OMIM:264090","GARD:330","SCTID:238874008","ICD9:259.8","NCIT:C121565","DOID:0081333","MEDGEN:140806","MESH:C536423","UMLS:C0406586"],"synonyms":[{"name":"Wiedemann Rautenstrauch Syndrome","type":"exact"},{"name":"Wiedemann Rautenstrauch syndrome","type":"related"},{"name":"Wiedemann-Rautenstrauch syndrome","type":"exact"},{"name":"neonatal progeroid syndrome","type":"exact"},{"name":"progeroid syndrome neonatal","type":"related"},{"name":"progeroid syndrome, neonatal","type":"related"}],"termid":"MONDO:0009910","terms_by_termid":{"MONDO:0009910":null},"xrefs":{"Monarch":{"xref_id":"0009910"}}}


id: GO:0045169
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large intracellular spectrin-rich structure that has been found in insect germline cells and mammalian hematopoietic cells. The fusome is an elongated, branched structure, formed from the spherical spectrosome organelle.","definition_xrefs":["GOC:bf","PMID:12655376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"fusome","termid":"GO:0045169"}


id: PBO:0062334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 73 pseudogene","termid":"PBO:0062334"}


id: PBO:0090060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi localized protein, human HID1 ortholog 3, implicated in vesicle-mediated transport","termid":"PBO:0090060"}


id: PBO:0088527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folylpolyglutamate synthase Fol3","termid":"PBO:0088527"}


id: PBO:0038508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily D member 1 pseudogene 3","termid":"PBO:0038508"}


id: GO:0099050
data:
  {"annotated_genes":["SJAG_02384"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99460],"is_not":false,"summary":null,"term":"GO:0099050"}]},"cv_name":"biological_process","definition":"The membrane scission process that is the final step in the formation of a vesicle, leading to separation from its parent membrane. Vesicle scission involves the constriction of a neck-forming protein complex, consisting e.g. of dynamin, around the budded membrane, leading to vesicle closure during its separation from the parent membrane.","definition_xrefs":["PMID:21779028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane fission","termid":"GO:0090148"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02384":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"vesicle scission","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099050","terms_by_termid":{"GO:0099050":null}}


id: PBO:0110256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snRNA and snoRNA trimethylguanosine synthase Tgs1","termid":"PBO:0110256"}


id: MONDO:0013311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ectodermal dysplasia-syndactyly syndrome is a rare, genetic ectodermal dysplasia syndrome characterized by sparse to absent scalp hair, eyebrows, and eyelashes (with pili torti when present), widely spaced, conical-shaped teeth with peg-shaped, conical crowns and enamel hypoplasia and palmoplantar hyperkeratosis, associated with partial cutaneous syndactyly in hands and feet.","definition_xrefs":["Orphanet:247820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia-syndactyly syndrome","secondary_identifiers":["MEDGEN:1648397","UMLS:C4749852","OMIMPS:613573","GARD:17198"],"synonyms":[{"name":"EDSS","type":"exact"},{"name":"EDSS1","type":"exact"},{"name":"ectodermal dysplasia-syndactyly syndrome 1","type":"related"},{"name":"ectodermal dysplasia-syndactyly syndrome type 1","type":"exact"}],"termid":"MONDO:0013311","xrefs":{"Monarch":{"xref_id":"0013311"}}}


id: GO:1905263
data:
  {"annotated_genes":["SJAG_03048","SJAG_00100"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101880,107844],"is_not":false,"summary":null,"term":"GO:1905263"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26653857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of meiotic DNA double-strand break formation","termid":"GO:1903343"},{"relation_name":"is_a","term_name":"regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","termid":"GO:1905261"},{"relation_name":"positively_regulates","term_name":"meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","termid":"GO:0010780"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0007049","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"positive regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","type":"narrow"},{"name":"up regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","type":"exact"},{"name":"up-regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","type":"exact"},{"name":"upregulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","type":"exact"}],"termid":"GO:1905263","terms_by_termid":{"GO:1905263":null}}


id: PBO:0087007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Riboflavin synthase; catalyzes the last step of the riboflavin biosynthesis pathway","termid":"PBO:0087007"}


id: MONDO:0007294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant congenital disorder affecting the skeletal muscles. Microscopically, it is characterized by disorganized areas, which are called cores, seen usually in the center of the muscle fibers. Clinically it presents as mild to severe muscle weakness. It may be associated with skeletal abnormalities including scoliosis, joint deformities, and hip dislocation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myofibrillar myopathy","termid":"MONDO:0018943"},{"relation_name":"is_a","term_name":"RYR1-related myopathy","termid":"MONDO:0100150"},{"relation_name":"is_a","term_name":"TPM2-related myopathy","termid":"MONDO:0100196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"central core myopathy","secondary_identifiers":["NANDO:1200479","MEDGEN:199773","NANDO:2200870","OMIM:117000","Orphanet:597","DOID:3529","NCIT:C83010","MESH:D020512","SCTID:43152001","UMLS:C0751951","EFO:1000855","icd11.foundation:2065822840","GARD:6014"],"synonyms":[{"name":"CCD","type":"related"},{"name":"Cco","type":"related"},{"name":"Shy-Magee syndrome","type":"related"},{"name":"central CORE disease of muscle","type":"related"},{"name":"central core disease","type":"exact"},{"name":"minicore myopathy, moderate, with hand involvement","type":"related"},{"name":"multicore myopathy, moderate, with hand involvement","type":"related"},{"name":"multiminicore disease, moderate, with hand involvement","type":"related"},{"name":"muscle core disease","type":"related"},{"name":"muscular central core disease","type":"related"},{"name":"myopathy, central core","type":"related"},{"name":"myopathy, central fibrillar","type":"related"},{"name":"neuromuscular disease, congenital, with uniform type 1 Fiber","type":"related"},{"name":"neuromuscular disease, congenital, with uniform type 1 Fibre","type":"related"}],"termid":"MONDO:0007294","xrefs":{"Monarch":{"xref_id":"0007294"}}}


id: MONDO:0000292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with Philophthalmus.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"echinostomiasis","termid":"MONDO:0005739"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"philophthalmiasis","secondary_identifiers":["DOID:0050250"],"synonyms":[{"name":"Philophthalmus caused disease or disorder","type":"exact"},{"name":"Philophthalmus disease or disorder","type":"exact"},{"name":"Philophthalmus infectious disease","type":"exact"}],"termid":"MONDO:0000292","xrefs":{"Monarch":{"xref_id":"0000292"}}}


id: MONDO:0015032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A WHO grade I perineurioma that arises within the endoneurium. It is characterized by the formation of pseudo-onion bulbs by the proliferating perineural cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"perineurioma","termid":"MONDO:0019404"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraneural perineurioma","secondary_identifiers":["icd11.foundation:362421359","Orphanet:100003","GARD:10921","DOID:4696","NCIT:C6911","MEDGEN:237162","SCTID:768934004","UMLS:C1370658"],"synonyms":[{"name":"intraneural perineurioma","type":"exact"},{"name":"intraneural perineurioma (WHO grade I)","type":"exact"}],"termid":"MONDO:0015032","xrefs":{"Monarch":{"xref_id":"0015032"}}}


id: PR:P87169
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitotic spindle assembly checkpoint protein MAD1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02796","PANTHER:PTHR23168:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle assembly checkpoint component mad1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.04c","secondary_identifiers":["UniProtKB:P87169"],"synonyms":[{"name":"SPBC3D6.04c","type":"related"},{"name":"Spom972h-MAD1L1","type":"exact"},{"name":"mitotic arrest deficient protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87169"}


id: PBO:0063217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 7","termid":"PBO:0063217"}


id: PBO:0046539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group E member 2","termid":"PBO:0046539"}


id: GO:0141080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont subverts an interferon-mediated signal transduction pathway in the host organism by initiating, promoting, or enhancing its activation.","definition_xrefs":["PMID:26553469","PMID:29076073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated activation of host signal transduction pathway","termid":"GO:0052028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host interferon signaling pathway","termid":"GO:0141080"}


id: MONDO:0006115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An advanced phase of chronic myelogenous leukemia. It is characterized by: 1. the presence of blasts in the peripheral blood or bone marrow that are at least 20% of the peripheral blood white cells or of the nucleated cells in the bone marrow respectively, or 2. an extramedullary proliferation of blasts, and/or 3. when there are large aggregates and clusters of blasts in the bone marrow biopsy specimen (adapted from WHO, 2001).","definition_xrefs":["NCIT:C9110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic myelogenous leukemia, BCR-ABL1 positive","termid":"MONDO:0011996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"blast phase chronic myelogenous leukemia, BCR-ABL1 positive","secondary_identifiers":["EFO:1000131","SCTID:413656006","MEDGEN:2281","UMLS:C0005699","MESH:D001752"],"synonyms":[{"name":"blast crises","type":"related"},{"name":"blast crisis","type":"exact"},{"name":"blast phase","type":"related"},{"name":"blast phase CML","type":"exact"},{"name":"blast phase chronic granulocytic leukaemia","type":"exact"},{"name":"blast phase chronic granulocytic leukemia","type":"exact"},{"name":"blast phase chronic myelocytic leukaemia","type":"exact"},{"name":"blast phase chronic myelocytic leukemia","type":"exact"},{"name":"blast phase chronic myelogenous leukaemia","type":"exact"},{"name":"blast phase chronic myelogenous leukemia","type":"exact"},{"name":"blast phase chronic myeloid leukaemia","type":"exact"},{"name":"blast phase chronic myeloid leukemia","type":"exact"},{"name":"blast phases","type":"related"},{"name":"blastic phase CML","type":"exact"},{"name":"blastic phase chronic granulocytic leukaemia","type":"exact"},{"name":"blastic phase chronic granulocytic leukemia","type":"exact"},{"name":"blastic phase chronic myelocytic leukaemia","type":"exact"},{"name":"blastic phase chronic myelocytic leukemia","type":"exact"},{"name":"blastic phase chronic myelogenous leukaemia","type":"exact"},{"name":"blastic phase chronic myelogenous leukemia","type":"exact"},{"name":"blastic phase chronic myeloid leukaemia","type":"exact"},{"name":"blastic phase chronic myeloid leukemia","type":"exact"},{"name":"crises, blast","type":"related"},{"name":"crisis, blast","type":"related"},{"name":"phase, blast","type":"related"},{"name":"phases, blast","type":"related"}],"termid":"MONDO:0006115","xrefs":{"Monarch":{"xref_id":"0006115"}}}


id: MONDO:0044792
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86280],"is_not":false,"summary":null,"term":"MONDO:0044792"}]},"cv_name":"mondo","definition":"A large, or giant, congenital melanocytic nevus (LCMN or GCMN) is a pigmented skin lesion of more than 20 cm - or 40 cm- respectively, projected adult diameter, composed of melanocytes, and presenting with an elevated risk of malignant transformation.","definition_xrefs":["Orphanet:626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"large congenital melanocytic nevus","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C3944","MedDRA:10072036","GARD:2469","icd11.foundation:618273329","ICDO:8761/1","NORD:1184","MEDGEN:330752","ONCOTREE:SKCN","SCTID:398696001","DOID:0111359","SCTID:254815002","OMIM:137550","UMLS:C1842036","NCIT:C4234"],"synonyms":[{"name":"CMNS","type":"related"},{"name":"GMN","type":"exact"},{"name":"GPHN","type":"related"},{"name":"Giant Congenital Melanocytic Nevus","type":"exact"},{"name":"LCMN","type":"exact"},{"name":"bathing trunk nevus","type":"exact"},{"name":"congenital giant pigmented nevus","type":"related"},{"name":"congenital hairy nevus","type":"related"},{"name":"congenital melanocytic nevi","type":"exact"},{"name":"congenital melanocytic nevus","type":"exact"},{"name":"congenital melanocytic nevus of skin","type":"exact"},{"name":"congenital melanocytic nevus of the skin","type":"exact"},{"name":"congenital nevus","type":"related"},{"name":"congenital nevus of skin","type":"exact"},{"name":"congenital nevus of the skin","type":"exact"},{"name":"congenital pigmented melanocytic Nevus","type":"exact"},{"name":"congenital pigmented nevus","type":"exact"},{"name":"congenital pigmented nevus of skin","type":"exact"},{"name":"congenital pigmented nevus of the skin","type":"exact"},{"name":"congenital pigmented skin nevus","type":"exact"},{"name":"congenital skin nevus","type":"exact"},{"name":"giant congenital melanocytic nevus","type":"related"},{"name":"giant congenital nevus","type":"exact"},{"name":"giant congenital pigmented Nevus","type":"related"},{"name":"giant hairy nevus","type":"related"},{"name":"giant pigmented hairy nevus","type":"exact"},{"name":"giant pigmented nevus","type":"related"},{"name":"giant pigmented nevus of skin","type":"exact"},{"name":"giant pigmented nevus of the skin","type":"exact"},{"name":"large congenital melanocytic nevus","type":"exact"},{"name":"melanocytic nevus syndrome, congenital","type":"related"},{"name":"melanocytic nevus syndrome, congenital, somatic","type":"exact"},{"name":"nevus spilus","type":"related"},{"name":"pigmented moles","type":"related"},{"name":"spitz nevus","type":"related"},{"name":"spitz nevus or nevus spilus, somatic","type":"exact"}],"termid":"MONDO:0044792","terms_by_termid":{"MONDO:0044792":null},"xrefs":{"Monarch":{"xref_id":"0044792"}}}


id: GO:2000580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of ATP-dependent microtubule motor activity, plus-end-directed.","definition_xrefs":["GOC:kmv","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of microtubule motor activity, plus-end-directed (obsolete GO:2000580)","synonyms":[{"name":"regulation of ATP-dependent microtubule motor activity, plus-end-directed","type":"exact"},{"name":"regulation of kinesin ATP phosphohydrolase (plus-end-directed)","type":"exact"},{"name":"regulation of kinesin activity","type":"related"},{"name":"regulation of plus-end-directed kinesin ATPase activity","type":"exact"},{"name":"regulation of plus-end-directed microtubule motor activity","type":"broad"}],"termid":"GO:2000580"}


id: MONDO:0003201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete esophagus adenocarcinoma (obsolete MONDO:0003201)","termid":"MONDO:0003201","xrefs":{"Monarch":{"xref_id":"0003201"}}}


id: FYPO:0006987
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in silent mating-type cassettes occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000873"},{"relation_name":"is_a","term_name":"abnormal histone methylation at silent mating-type cassette during vegetative growth","termid":"FYPO:0007373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002494","FYPO:0000002","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H3-K9 dimethylation at silent mating-type cassette during vegetative growth","synonyms":[{"name":"increased histone H3 K9 dimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation at mating-type region heterochromatin during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 dimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"increased histone H3K9me2 at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 dimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"increased silent mating-type cassette histone H3-K9 dimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0006987"}


id: GO:1903027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of opsonization.","definition_xrefs":["GOC:BHF","GO_REF:0000058","PMID:22333221","GOC:TermGenie","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"opsonization","termid":"GO:0008228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of opsonization","termid":"GO:1903027"}


id: PBO:0077915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 6","termid":"PBO:0077915"}


id: GO:0036046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a malonyl group (CO-CH2-CO), from an amino acid residue within a protein or peptide.","definition_xrefs":["GOC:sp","PMID:22076378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deacylation","termid":"GO:0035601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein demalonylation","termid":"GO:0036046"}


id: PR:Q10321
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- shg1 gene.","definition_xrefs":["UniProtKB:Q10321","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"set1 complex component shg1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.09","synonyms":[{"name":"COMPASS component shg1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Set1C component shg1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-shg1","type":"exact"},{"name":"complex proteins associated with set1 protein shg1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10321"}


id: GO:0002080
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The membrane that surrounds the acrosomal lumen. The acrosome is a special type of lysosome in the head of a spermatozoon that contains acid hydrolases and is concerned with the breakdown of the outer membrane of the ovum during fertilization.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule membrane","termid":"GO:0030667"},{"relation_name":"part_of","term_name":"acrosomal vesicle","termid":"GO:0001669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"acrosomal membrane","termid":"GO:0002080"}


id: PBO:0047674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fli-1 proto-oncogene, ETS transcription factor","termid":"PBO:0047674"}


id: MONDO:0008090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hematologic disorder caused by a mutation in the ELANE (ELA2) gene; clinical manifestations include recurrent neutropenia with resultant susceptibility to infection leading to fever.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"constitutional neutropenia","termid":"MONDO:0015134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"cyclic hematopoiesis","secondary_identifiers":["NANDO:2200746","DOID:5339","GARD:6229","NANDO:1200354","UMLS:C0221023","OMIM:162800","SCTID:191347008","MEDGEN:65121","NCIT:C3820","ICD9:288.02","MedDRA:10053176","MESH:C536227","Orphanet:2686"],"synonyms":[{"name":"CH","type":"exact"},{"name":"CN","type":"exact"},{"name":"cyclic agranulocytosis","type":"exact"},{"name":"cyclic hematopoiesis","type":"exact"},{"name":"cyclic neutropenia","type":"related"},{"name":"cyclical neutropenia","type":"exact"},{"name":"dysplasia, myelocytic periodic","type":"exact"},{"name":"neutropenia cyclic","type":"related"},{"name":"neutropenia, cyclic","type":"exact"},{"name":"neutropenia, periodic","type":"exact"},{"name":"periodic neutropenia","type":"exact"}],"termid":"MONDO:0008090","xrefs":{"Monarch":{"xref_id":"0008090"}}}


id: MONDO:0020088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial partial lipodystrophy (FPLD) is a group of rare genetic lipodystrophic syndromes characterized, in most cases, by fat loss from the limbs and buttocks, from childhood or early adulthood, and often associated with acanthosis nigricans, insulin resistance, diabetes, hypertriglyceridemia and liver steatosis.","definition_xrefs":["Orphanet:98306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary lipodystrophy","termid":"MONDO:0020087"},{"relation_name":"is_a","term_name":"laminopathy","termid":"MONDO:0021106"},{"relation_name":"is_a","term_name":"partial lipodystrophy","termid":"MONDO:0027767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"familial partial lipodystrophy","secondary_identifiers":["icd11.foundation:1661968243","SCTID:49292002","GARD:11962","MESH:D052496","UMLS:C0271694","MEDGEN:124408","DOID:0050440","NANDO:1200861","NORD:1131","NCIT:C84708","OMIMPS:151660"],"synonyms":[{"name":"FPLD","type":"exact"},{"name":"Koberling-Dunnigan syndrome","type":"exact"},{"name":"congenital partial lipodystrophy","type":"exact"},{"name":"genetic partial lipodystrophy","type":"exact"},{"name":"lipodystrophy, familial partial","type":"exact"}],"termid":"MONDO:0020088","xrefs":{"Monarch":{"xref_id":"0020088"}}}


id: PBO:0054879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2293","termid":"PBO:0054879"}


id: PBO:0054487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1887","termid":"PBO:0054487"}


id: PBO:0070335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 7","termid":"PBO:0070335"}


id: SO:0000324
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A nucleotide sequence that may be used to identify a larger sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligo","termid":"SO:0000696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tag","termid":"SO:0000324"}


id: GO:1990310
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type-III dockerin domain of a protein. Type-III dockerin domain is the binding partner of type-III cohesin domain.","definition_xrefs":["PMID:23195689","GOC:mengo_curators","PMID:24080387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type-III dockerin domain binding","termid":"GO:1990310"}


id: PBO:0047837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box R2","termid":"PBO:0047837"}


id: PBO:0054477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1877","termid":"PBO:0054477"}


id: GO:0140259
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a PRC1 complex.","definition_xrefs":["PMID:15280237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"PRC1 complex binding","termid":"GO:0140259"}


id: GO:0009165
data:
  {"annotated_genes":["SJAG_03771","SJAG_02948","SJAG_00964","SJAG_01081","SJAG_00694","SJAG_00444","SJAG_01814","SJAG_02887","SJAG_03946","SJAG_01859","SJAG_01352","SJAG_02564","SJAG_04487","SJAG_02618","SJAG_00533","SJAG_00133","SJAG_04709","SJAG_01500","SJAG_02364","SJAG_01566","SJAG_02850","SJAG_00836","SJAG_04634","SJAG_MIT37","SJAG_00885","SJAG_04882","SJAG_00044","SJAG_00957","SJAG_MIT09","SJAG_03708","SJAG_03164","SJAG_04845","SJAG_00438","SJAG_02598","SJAG_05204","SJAG_03811","SJAG_00779","SJAG_04681","SJAG_01070","SJAG_03355","SJAG_05024","SJAG_02874","SJAG_03298","SJAG_01471","SJAG_04354","SJAG_02105","SJAG_MIT15","SJAG_04970","SJAG_04713","SJAG_04665","SJAG_04123","SJAG_04627","SJAG_01298","SJAG_03925","SJAG_07003","SJAG_00985","SJAG_04657","SJAG_01359","SJAG_02038","SJAG_04122","SJAG_03140","SJAG_00197","SJAG_00542","SJAG_01937","SJAG_04467","SJAG_01661","SJAG_04693","SJAG_00915","SJAG_01582","SJAG_03114","SJAG_04849","SJAG_02889","SJAG_04422","SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102920,88355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[87259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[97296,118479,116852,102921,114001,99072,109741,109855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[92898,111404,116214,88928,97997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[71370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009265"},{"annotations":[97621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[93018,116335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[115074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[67456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[99568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[92449,114408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[94973,91921,106749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[96494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015966"},{"annotations":[117523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[88853,107866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[88854,91922,117524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[117525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[107867,98491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"},{"annotations":[113606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006747"},{"annotations":[115226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009398"},{"annotations":[100691,107757,59209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[93236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[101740,99569,107758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[118480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006188"},{"annotations":[93238,101312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[90555,98843,112583,90132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034356"},{"annotations":[99561,116797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[88495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[91404,96966,95943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006741"},{"annotations":[88496,90133,109111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019358"},{"annotations":[66905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015986"},{"annotations":[102535,107298,92763,115342,118568,104499,94328,88606,92333,101316,103153,103182,108276,118557,118563,107391,93351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[114453,109415,97203,88359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006164"},{"annotations":[109857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009152"},{"annotations":[117502],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905706"},{"annotations":[115075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[91455,86942,114410,92450,87927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"},{"annotations":[99570],"is_not":false,"re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chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"},{"relation_name":"is_a","term_name":"nucleoside phosphate biosynthetic 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biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"nucleotide anabolism","type":"exact"},{"name":"nucleotide biosynthesis","type":"exact"},{"name":"nucleotide formation","type":"exact"},{"name":"nucleotide synthesis","type":"exact"}],"termid":"GO:0009165","terms_by_termid":{"GO:0006164":null,"GO:0006172":null,"GO:0006177":null,"GO:0006183":null,"GO:0006188":null,"GO:0006189":null,"GO:0006225":null,"GO:0006226":null,"GO:0006227":null,"GO:0006228":null,"GO:0006231":null,"GO:0006233":null,"GO:0006235":null,"GO:0006240":null,"GO:0006241":null,"GO:0006741":null,"GO:0006747":null,"GO:0009152":null,"GO:0009224":null,"GO:0009265":null,"GO:0009398":null,"GO:0009435":null,"GO:0015966":null,"GO:0015986":null,"GO:0019358":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0034355":null,"GO:0034356":null,"GO:0042776":null,"GO:0044205":null,"GO:0044206":null,"GO:0044208":null,"GO:0044209":null,"GO:0044210":null,"GO:0044211":null,"GO:0046705":null,"GO:1905706":null}}


id: PBO:0048061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 10","termid":"PBO:0048061"}


id: GO:0000489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of SSU-rRNA","termid":"GO:0030490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0010467","GO:0042254"],"is_obsolete":false,"name":"maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)","termid":"GO:0000489"}


id: MONDO:0007207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Book syndrome is a rare autosomal dominant ectodermal dysplasia syndrome reported in a Swedish family (25 cases from 4 generations), and one isolated case, and is characterized by premolar aplasia, hyperhidrosis, and premature graying of the hair. Additional features reported in the isolated case include a narrow palate, hypoplastic nails, eyebrow anomalies, a unilateral simian crease, and poorly formed dermatoglyphics.","definition_xrefs":["Orphanet:1262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Böök syndrome","secondary_identifiers":["MEDGEN:99140","MESH:C562993","GARD:932","OMIM:112300","UMLS:C0457014","SCTID:722296002"],"synonyms":[{"name":"Böök syndrome","type":"exact"},{"name":"PHC syndrome","type":"related"},{"name":"book syndrome","type":"exact"},{"name":"premolar aplasia, hyperhidrosis, and canities prematura","type":"related"}],"termid":"MONDO:0007207","xrefs":{"Monarch":{"xref_id":"0007207"}}}


id: GO:0052692
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: raffinose + H2O = alpha-D-galactose + sucrose.","definition_xrefs":["PMID:20739305","RHEA:70275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-galactosidase activity","termid":"GO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"raffinose alpha-galactosidase activity","secondary_identifiers":["KEGG_REACTION:R01103","MetaCyc:RXN-11502"],"synonyms":[{"name":"alkaline alpha-galactosidase activity","type":"broad"},{"name":"raffinose galactohydrolase activity","type":"broad"},{"name":"raffinose-specific alkaline alpha-galactosidase activity","type":"exact"}],"termid":"GO:0052692"}


id: GO:0035421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of the inactive enzyme MAP kinase kinase in the context of an innate immune response, a defense response mediated by germline encoded components that directly recognize components of potential pathogens.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKK activity involved in innate immune response (obsolete GO:0035421)","termid":"GO:0035421"}


id: GO:0035160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Ensuring that tracheal tubes in an open tracheal system maintain their epithelial structure during the cell shape changes and movements that occur during the branching process.","definition_xrefs":["PMID:10694415","GOC:mtg_sensu","PMID:14681183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial structure maintenance","termid":"GO:0010669"},{"relation_name":"is_a","term_name":"regulation of tube architecture, open tracheal system","termid":"GO:0035152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of epithelial integrity, open tracheal system","synonyms":[{"name":"maintenance of tracheal epithelial integrity","type":"exact"}],"termid":"GO:0035160"}


id: PBO:0081834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 768","termid":"PBO:0081834"}


id: PR:O74923
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC757.13 gene.","definition_xrefs":["UniProtKB:O74923","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C757.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.13","synonyms":[{"name":"Spom972h-SPCC757.13","type":"exact"}],"termid":"PR:O74923"}


id: PBO:0055689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipopolysaccharide induced TNF factor","termid":"PBO:0055689"}


id: MONDO:0022762
data:
  {"annotated_genes":["SJAG_01806"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008684"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 4","termid":"MONDO:0016869"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01806":null},"genotype_count":0,"is_obsolete":false,"name":"chromosome 4 short arm deletion","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:Q93.3","MEDGEN:419441","UMLS:C2931557","MESH:C537637","icd11.foundation:1460916074","Orphanet:261884","GARD:20808"],"synonyms":[{"name":"4p deletion","type":"exact"},{"name":"4p monosomy","type":"exact"},{"name":"chromosome 4p deletion","type":"exact"},{"name":"deletion 4p","type":"exact"},{"name":"monosomy 4p","type":"exact"},{"name":"partial deletion of chromosome 4p","type":"exact"},{"name":"partial deletion of the short arm of chromosome 4","type":"exact"},{"name":"partial deletion of the short arm of chromosome type 4","type":"exact"},{"name":"partial monosomy 4p","type":"exact"},{"name":"partial monosomy of chromosome 4p","type":"exact"},{"name":"partial monosomy of the short arm of chromosome 4","type":"exact"}],"termid":"MONDO:0022762","terms_by_termid":{"MONDO:0008684":null},"xrefs":{"Monarch":{"xref_id":"0022762"}}}


id: PBO:0083075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dioxygenase that catalyzes alpha-oxygenation of 2-hydroxy fatty acids; involved in metabolism of phytosphingosine; not an essential gene","termid":"PBO:0083075"}


id: GO:0050339
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dTTP + H2O = dTDP + H+ + phosphate.","definition_xrefs":["RHEA:19013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside triphosphate phosphatase activity","termid":"GO:0017111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"TTPase activity","secondary_identifiers":["MetaCyc:THYMIDINE-TRIPHOSPHATASE-RXN","EC:3.6.1.39"],"synonyms":[{"name":"dTTP nucleotidohydrolase activity","type":"related"},{"name":"dTTPase activity","type":"related"},{"name":"deoxythymidine-5'-triphosphatase activity","type":"related"},{"name":"thymidine triphosphatase activity","type":"exact"},{"name":"thymidine triphosphate nucleotidohydrolase activity","type":"related"},{"name":"thymidine-triphosphatase activity","type":"exact"}],"termid":"GO:0050339"}


id: PBO:0029665
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_DNA_topoisomerase_type_I_activity","termid":"PBO:0029665"}


id: GO:0044599
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An AP-type membrane coat adaptor complex that in humans consists of beta5, zeta, mu5 and sigma5 subunits and is found associated with membranes in the endosomes; it is not clear whether AP-5 forms clathrin coats in vivo.","definition_xrefs":["PMID:22022230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AP-type membrane coat adaptor complex","termid":"GO:0030119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"AP-5 adaptor complex","synonyms":[{"name":"adaptor protein-5 adaptor complex","type":"exact"}],"termid":"GO:0044599"}


id: GO:0070807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phialide development, a process that leads to the formation of phialides. Phialides are specialized cells that bud from the ends of metulae on the conidiophore tip.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of phialide development","termid":"GO:0070805"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"phialide development","termid":"GO:0070790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phialide development","termid":"GO:0070807"}


id: PBO:0075441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted protein acidic and cysteine rich","termid":"PBO:0075441"}


id: PBO:0052982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ladinin 1","termid":"PBO:0052982"}


id: PBO:0011436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposable element/transposon Tf2-type","termid":"PBO:0011436"}


id: FYPO:0002373
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patch localization is abnormal during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cortical patch localization during vegetative growth","termid":"FYPO:0000190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0004803","FYPO:0000002"],"is_obsolete":false,"name":"abnormal actin cortical patch localization during mitosis","synonyms":[{"name":"abnormal F-actin patch localization during mitosis","type":"exact"},{"name":"abnormal actin cortical patch localisation during mitosis","type":"exact"},{"name":"abnormal actin cortical patch localization during mitosis during mitotic cell cycle","type":"related"},{"name":"abnormal actin cortical patch localization during mitosis during vegetative growth","type":"exact"},{"name":"abnormal actin cortical patch localization during mitotic M phase","type":"related"},{"name":"abnormal actin cortical patch localization during mitotic nuclear division","type":"exact"},{"name":"abnormal actin cortical patch location during mitosis","type":"related"},{"name":"abnormal actin patch localization during mitosis","type":"exact"}],"termid":"FYPO:0002373"}


id: PBO:0050846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ICA1 antisense RNA 1","termid":"PBO:0050846"}


id: GO:1903908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of plasma membrane raft polarization.","definition_xrefs":["GOC:als","GO_REF:0000058","GOC:TermGenie","PMID:23575248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of plasma membrane raft polarization","termid":"GO:1903906"},{"relation_name":"positively_regulates","term_name":"plasma membrane raft polarization","termid":"GO:0044858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"positive regulation of plasma membrane raft polarization","synonyms":[{"name":"activation of plasma membrane raft polarization","type":"narrow"},{"name":"up regulation of plasma membrane raft polarization","type":"exact"},{"name":"up-regulation of plasma membrane raft polarization","type":"exact"},{"name":"upregulation of plasma membrane raft polarization","type":"exact"}],"termid":"GO:1903908"}


id: GO:0005276
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a vesicle membrane to the other according to the reaction: H+(in) + amino acid(out) = H+(out) + amino acid(in).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete vesicular amino acid:proton antiporter activity (obsolete GO:0005276)","synonyms":[{"name":"hydrogen:vesicular amine antiporter activity","type":"exact"},{"name":"vesicular hydrogen:amino acid antiporter activity","type":"exact"}],"termid":"GO:0005276"}


id: MONDO:0034676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare overgrowth syndrome with skeletal involvement characterized by long and slim body habitus and multiple skeletal manifestations, such as scoliosis, macrodactyly of the big toes, arachnodactyly of fingers and toes, camptodactyly and clinodactyly, and progressive valgus deformities of the feet. Epimetaphyseal dysplasia, bowing of the tibiae, and dysmorphic facial features (hypertelorism, high palate, or micrognathia), as well as aortic root dilatation and umbilical hernia have also been reported.","definition_xrefs":["Orphanet:498488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"overgrowth syndrome with 2q37 translocation","secondary_identifiers":["GARD:22032","MEDGEN:1798659","UMLS:C5567236"],"termid":"MONDO:0034676","xrefs":{"Monarch":{"xref_id":"0034676"}}}


id: PATO:0001888
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a liquid inhering in a bearer by virtue of the bearer's ability to mix with (dissolve in) another liquid.","definition_xrefs":["Chemicool:Chemicool"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quality of a liquid","termid":"PATO:0001548"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miscibility","termid":"PATO:0001888"}


id: PBO:0029948
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_tyrosine_phosphorylation_during_cellular_response_to_osmotic_stress","termid":"PBO:0029948"}


id: GO:2001209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transcription elongation from RNA polymerase I promoter.","definition_xrefs":["PMID:20299458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription, elongation","termid":"GO:0032786"},{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase I","termid":"GO:0045943"},{"relation_name":"is_a","term_name":"regulation of transcription elongation by RNA polymerase I","termid":"GO:2001207"},{"relation_name":"positively_regulates","term_name":"transcription elongation by RNA polymerase I","termid":"GO:0006362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"positively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006355","GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of transcription elongation by RNA polymerase I","synonyms":[{"name":"positive regulation of RNA elongation from Pol I promoter","type":"exact"},{"name":"positive regulation of transcription elongation from RNA polymerase I promoter","type":"exact"}],"termid":"GO:2001209"}


id: RO:0008502
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of epiphyte of","direct_ancestors":[{"relation_name":"is_a","term_name":"symbiotically_interacts_with","termid":"RO:0002440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_epiphyte","termid":"RO:0008502"}


id: PBO:0084788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein; forms heterodimer complex with Mss1p that performs 5-carboxymethylaminomethyl modification of the wobble uridine base in mitochondrial tRNAs; required for respiration in paromomycin-resistant 15S rRNA mutants; human homolog MTO1 can complement yeast null mutant","termid":"PBO:0084788"}


id: MONDO:0010898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, familial partial epilepsy disease characterized by focal seizures associated with prominent ictal auditory symptoms, and/or receptive aphasia, presenting in two or more family members and having a relatively benign evolution.","definition_xrefs":["Orphanet:101046"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"temporal lobe epilepsy","termid":"MONDO:0005115"},{"relation_name":"is_a","term_name":"familial partial epilepsy","termid":"MONDO:0017704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"autosomal dominant epilepsy with auditory features","secondary_identifiers":["icd11.foundation:832717248","MEDGEN:325326","GARD:2257","UMLS:C1838062","MESH:C537297"],"synonyms":[{"name":"ADEAF","type":"exact"},{"name":"ADLTE","type":"exact"},{"name":"ADPEAF","type":"exact"},{"name":"Autosomal dominant epilepsy with auditory features","type":"exact"},{"name":"autosomal dominant epilepsy with auditory features","type":"exact"},{"name":"autosomal dominant lateral temporal lobe epilepsy","type":"exact"},{"name":"autosomal dominant partial epilepsy with auditory features","type":"related"},{"name":"epilepsy, familial temporal lobe 1","type":"narrow"},{"name":"partial epilepsy with auditory aura","type":"exact"},{"name":"partial epilepsy with auditory features","type":"exact"}],"termid":"MONDO:0010898","xrefs":{"Monarch":{"xref_id":"0010898"}}}


id: FYPO:0006229
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of protein phosphorylation is longer than normal during a cellular response to phosphate starvation. All phosphorylation may be affected, or only phosphorylation of specific proteins, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of protein modification during vegetative growth","termid":"FYPO:0000548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0002274","FYPO:0002494","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased duration of protein phosphorylation during cellular response to phosphate starvation","synonyms":[{"name":"increased duration of protein phosphorylation during cellular response to phosphate starvation during mitotic cell cycle","type":"related"},{"name":"increased duration of protein phosphorylation during cellular response to phosphate starvation during vegetative growth","type":"exact"},{"name":"increased duration of protein phosphorylation during phosphate starvation","type":"exact"},{"name":"prolonged protein phosphorylation during cellular response to phosphate starvation","type":"exact"}],"termid":"FYPO:0006229"}


id: GO:1905524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein autoubiquitination.","definition_xrefs":["GO_REF:0000058","GOC:bc","GOC:TermGenie","PMID:17237821","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein ubiquitination","termid":"GO:0031397"},{"relation_name":"is_a","term_name":"regulation of protein autoubiquitination","termid":"GO:1902498"},{"relation_name":"negatively_regulates","term_name":"protein autoubiquitination","termid":"GO:0051865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein autoubiquitination","synonyms":[{"name":"down regulation of protein auto-ubiquitination","type":"exact"},{"name":"down regulation of protein auto-ubiquitinylation","type":"exact"},{"name":"down regulation of protein autoubiquitination","type":"exact"},{"name":"down regulation of protein autoubiquitinylation","type":"exact"},{"name":"down regulation of protein self-ubiquitination","type":"exact"},{"name":"down regulation of protein self-ubiquitinylation","type":"exact"},{"name":"down-regulation of protein auto-ubiquitination","type":"exact"},{"name":"down-regulation of protein auto-ubiquitinylation","type":"exact"},{"name":"down-regulation of protein autoubiquitination","type":"exact"},{"name":"down-regulation of protein autoubiquitinylation","type":"exact"},{"name":"down-regulation of protein self-ubiquitination","type":"exact"},{"name":"down-regulation of protein self-ubiquitinylation","type":"exact"},{"name":"downregulation of protein auto-ubiquitination","type":"exact"},{"name":"downregulation of protein auto-ubiquitinylation","type":"exact"},{"name":"downregulation of protein autoubiquitination","type":"exact"},{"name":"downregulation of protein autoubiquitinylation","type":"exact"},{"name":"downregulation of protein self-ubiquitination","type":"exact"},{"name":"downregulation of protein self-ubiquitinylation","type":"exact"},{"name":"inhibition of protein auto-ubiquitination","type":"narrow"},{"name":"inhibition of protein auto-ubiquitinylation","type":"narrow"},{"name":"inhibition of protein autoubiquitination","type":"narrow"},{"name":"inhibition of protein autoubiquitinylation","type":"narrow"},{"name":"inhibition of protein self-ubiquitination","type":"narrow"},{"name":"inhibition of protein self-ubiquitinylation","type":"narrow"},{"name":"negative regulation of protein auto-ubiquitination","type":"exact"},{"name":"negative regulation of protein auto-ubiquitinylation","type":"exact"},{"name":"negative regulation of protein autoubiquitinylation","type":"exact"},{"name":"negative regulation of protein self-ubiquitination","type":"exact"},{"name":"negative regulation of protein self-ubiquitinylation","type":"exact"}],"termid":"GO:1905524"}


id: PBO:0083991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutathione-dependent oxidoreductase; mitochondrial matrix protein involved at an early step in the biogenesis of iron-sulfur centers along with Bol1p; hydroperoxide and superoxide-radical responsive; monothiol glutaredoxin subfamily member along with Grx3p and Grx4p","termid":"PBO:0083991"}


id: MONDO:1010114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Phenylketonuria that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenylketonuria, non-human animal","secondary_identifiers":["OMIA:002293"],"termid":"MONDO:1010114","xrefs":{"Monarch":{"xref_id":"1010114"}}}


id: MONDO:0013354
data:
  {"annotated_genes":["SJAG_00797"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86545],"is_not":false,"summary":null,"term":"MONDO:0013354"}]},"cv_name":"mondo","definition":"Any autosomal recessive spastic ataxia in which the cause of the disease is a mutation in the MTPAP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"autosomal recessive spastic ataxia","termid":"MONDO:0017847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00797":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"spastic ataxia 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:10992","ICD10CM:G11.4","OMIM:613672","MEDGEN:462275","UMLS:C3150925","Orphanet:254343","DOID:0050943"],"synonyms":[{"name":"MTPAP autosomal recessive spastic ataxia","type":"exact"},{"name":"SPAX4","type":"exact"},{"name":"autosomal recessive spastic ataxia - optic atrophy - dysarthria","type":"related"},{"name":"autosomal recessive spastic ataxia 4","type":"related"},{"name":"autosomal recessive spastic ataxia caused by mutation in MTPAP","type":"exact"},{"name":"autosomal recessive spastic ataxia type 4","type":"exact"},{"name":"autosomal recessive spastic ataxia-optic atrophy-dysarthria syndrome","type":"related"},{"name":"spastic ataxia 4, autosomal recessive","type":"related"},{"name":"spastic ataxia type 4","type":"exact"}],"termid":"MONDO:0013354","terms_by_termid":{"MONDO:0013354":null},"xrefs":{"Monarch":{"xref_id":"0013354"}}}


id: PATO:0001603
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A life span which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"life span","termid":"PATO:0000050"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased life span","synonyms":[{"name":"high life span","type":"exact"}],"termid":"PATO:0001603"}


id: GO:0045828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving isoprenoid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"positive regulation of lipid metabolic process","termid":"GO:0045834"},{"relation_name":"positively_regulates","term_name":"isoprenoid metabolic process","termid":"GO:0006720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of isoprenoid metabolic process","synonyms":[{"name":"activation of isoprenoid metabolic process","type":"narrow"},{"name":"positive regulation of isoprenoid metabolism","type":"exact"},{"name":"stimulation of isoprenoid metabolic process","type":"narrow"},{"name":"up regulation of isoprenoid metabolic process","type":"exact"},{"name":"up-regulation of isoprenoid metabolic process","type":"exact"},{"name":"upregulation of isoprenoid metabolic process","type":"exact"}],"termid":"GO:0045828"}


id: MONDO:0003157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Syndromes of bone destruction where the cause is not obvious such as neoplasia, infection, or trauma. The destruction follows various patterns: massive (Gorham disease), multicentric (hajdu-cheney syndrome), or carpal/tarsal.","definition_xrefs":["MESH:D010015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disappearing bone disease","secondary_identifiers":["NANDO:1200878","ICD9:733.09","UMLS:C0029436","DOID:4837","MEDGEN:45247","NANDO:1200880","SCTID:240161003"],"synonyms":[{"name":"Gorham's disease","type":"related"},{"name":"Gorham-Stout syndrome","type":"related"},{"name":"essential osteolysis","type":"exact"},{"name":"massive osteolysis","type":"related"},{"name":"phantom bone disease","type":"exact"}],"termid":"MONDO:0003157","xrefs":{"Monarch":{"xref_id":"0003157"}}}


id: MONDO:0002545
data:
  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disease involving the spinal cord.","direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system disorder","termid":"MONDO:0002602"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00106":null,"SJAG_00668":null,"SJAG_00754":null,"SJAG_00853":null,"SJAG_01260":null,"SJAG_01317":null,"SJAG_01352":null,"SJAG_01466":null,"SJAG_01522":null,"SJAG_01537":null,"SJAG_02242":null,"SJAG_02286":null,"SJAG_02289":null,"SJAG_02399":null,"SJAG_02509":null,"SJAG_02695":null,"SJAG_02919":null,"SJAG_03170":null,"SJAG_03328":null,"SJAG_03345":null,"SJAG_03495":null,"SJAG_03598":null,"SJAG_03712":null,"SJAG_03815":null,"SJAG_03894":null,"SJAG_03923":null,"SJAG_04042":null,"SJAG_04084":null,"SJAG_04156":null,"SJAG_04178":null,"SJAG_04321":null,"SJAG_04387":null,"SJAG_04425":null,"SJAG_04459":null,"SJAG_04489":null,"SJAG_04567":null,"SJAG_04907":null,"SJAG_05289":null,"SJAG_07000":null},"genotype_count":0,"is_obsolete":false,"name":"spinal cord disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D013118","UMLS:C0037928","SCTID:48522003","NCIT:C97110","EFO:0009488","MEDGEN:11550","ICD9:336.9","DOID:319","ICD9:336.8"],"synonyms":[{"name":"disease of spinal cord","type":"exact"},{"name":"disease of the spinal cord","type":"exact"},{"name":"disease or disorder of spinal cord","type":"exact"},{"name":"disorder of spinal cord","type":"exact"},{"name":"myelopathy","type":"related"},{"name":"spinal cord disease","type":"exact"},{"name":"spinal cord disease or disorder","type":"exact"},{"name":"spinal cord disorder","type":"exact"}],"termid":"MONDO:0002545","terms_by_termid":{"MONDO:0007103":null,"MONDO:0008025":null,"MONDO:0008026":null,"MONDO:0008453":null,"MONDO:0008458":null,"MONDO:0009669":null,"MONDO:0009672":null,"MONDO:0009673":null,"MONDO:0010043":null,"MONDO:0010056":null,"MONDO:0010190":null,"MONDO:0010338":null,"MONDO:0010459":null,"MONDO:0010532":null,"MONDO:0010936":null,"MONDO:0011120":null,"MONDO:0011223":null,"MONDO:0011436":null,"MONDO:0011585":null,"MONDO:0011879":null,"MONDO:0012077":null,"MONDO:0012080":null,"MONDO:0012890":null,"MONDO:0012891":null,"MONDO:0012945":null,"MONDO:0013243":null,"MONDO:0013501":null,"MONDO:0013715":null,"MONDO:0013853":null,"MONDO:0013884":null,"MONDO:0014485":null,"MONDO:0014531":null,"MONDO:0014874":null,"MONDO:0015353":null,"MONDO:0030860":null,"MONDO:0060585":null,"MONDO:0859529":null},"xrefs":{"Monarch":{"xref_id":"0002545"}}}


id: PR:A6X995
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC417.15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:A6X995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C417.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC417.15","synonyms":[{"name":"Spom972h-SPCC417.15","type":"exact"}],"termid":"PR:A6X995"}


id: PBO:0109079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3103","termid":"PBO:0109079"}


id: PBO:0046917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 32 member A","termid":"PBO:0046917"}


id: PBO:0051569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 15","termid":"PBO:0051569"}


id: MONDO:0035651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Choanal atresia-athelia-hypothyroidism-delayed puberty-short stature syndrome is an autosomal dominant disorder characterized by choanal atresia, athelia or hypoplastic nipples, branchial sinus abnormalities, neck pits, lacrimal duct anomalies, hearing loss, external ear malformations, and thyroid abnormalities.","definition_xrefs":["OMIM:620186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choanal atresia-athelia-hypothyroidism-delayed puberty-short stature syndrome","secondary_identifiers":["Orphanet:589856","MEDGEN:1830104","UMLS:C5680310","GARD:22366"],"synonyms":[{"name":"BCAHH","type":"exact"},{"name":"KMT2D-related choanal atresia-athelia-hypothyroidism-delayed puberty-short stature syndrome","type":"exact"},{"name":"branchial arch abnormalities, choanal atresia, athelia, hearing loss, and hypothyroidism syndrome","type":"exact"}],"termid":"MONDO:0035651","xrefs":{"Monarch":{"xref_id":"0035651"}}}


id: GO:0033200
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 4-diphospho-1D-myo-inositol (1,2,3,5,6)pentakisphosphate = ADP + 4,5-bisdiphosphoinositol-1D-myo-inositol (1,2,3,6)tetrakisphosphate, and ATP + 6-diphospho-1D-myo-inositol (1,2,3,4,5)pentakisphosphate = ADP + 5,6-bisdiphosphoinositol-1D-myo-inositol (1,2,3,4)tetrakisphosphate.","definition_xrefs":["PMID:17412958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoinositol pentakisphosphate kinase activity","termid":"GO:0000829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"diphosphoinositol pentakisphosphate 5-kinase activity","synonyms":[{"name":"IP7 5-kinase activity","type":"exact"},{"name":"diphosphoinositol-pentakisphosphate 5-kinase activity","type":"exact"},{"name":"inositol heptakisphosphate 5-kinase activity","type":"exact"}],"termid":"GO:0033200"}


id: PBO:0026747
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_degradation_during_mitotic_S_phase","termid":"PBO:0026747"}


id: MONDO:0006140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, extremely well differentiated cervical mucinous adenocarcinoma in which most of the neoplastic glands cannot be distinguished from the normal endocervical glands.","definition_xrefs":["NCIT:C40206"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical mucinous adenocarcinoma","termid":"MONDO:0002742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cervical mucinous adenocarcinoma, minimal deviation variant","secondary_identifiers":["DOID:6627","MEDGEN:273125","EFO:1000169","UMLS:C1516423"],"synonyms":[{"name":"cervical adenoma malignum","type":"exact"},{"name":"cervical mucinous adenocarcinoma, minimal deviation type","type":"exact"},{"name":"cervical mucinous adenocarcinoma, minimal deviation variant","type":"exact"}],"termid":"MONDO:0006140","xrefs":{"Monarch":{"xref_id":"0006140"}}}


id: PBO:0046217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 10","termid":"PBO:0046217"}


id: PBO:0044401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 63, pseudogene","termid":"PBO:0044401"}


id: GO:0001730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP = pppA(2'p5'A)n oligomers. This reaction requires the binding of double-stranded RNA.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016779","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2'-5'-oligoadenylate synthetase activity","secondary_identifiers":["MetaCyc:RXN-13648","Reactome:R-HSA-8983680","Reactome:R-HSA-8985091","Reactome:R-HSA-8985104","RHEA:34407","EC:2.7.7.84"],"synonyms":[{"name":"(2-5')oligo(A) synthetase activity","type":"exact"},{"name":"2'-5' oligoadenylate synthetase activity","type":"exact"},{"name":"2-5A synthetase activity","type":"exact"},{"name":"oligo-2',5'-adenylate synthetase activity","type":"exact"}],"termid":"GO:0001730"}


id: MONDO:0011776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic Infantile Neurological, Cutaneous, and Articular (CINCA) syndrome is characterized by skin rash, joint involvement, chronic meningitis with granulocytes and, in some cases, sensorineural hearing loss and ocular signs.","definition_xrefs":["Orphanet:1451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"},{"relation_name":"is_a","term_name":"cryopyrin-associated periodic syndrome","termid":"MONDO:0016168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"CINCA syndrome","secondary_identifiers":["OMIM:607115","NANDO:1200468","SCTID:239826001","MEDGEN:98370","UMLS:C0409818","NANDO:2201066","ICD9:759.89","DOID:0090029","NORD:1496","NCIT:C116380","GARD:1356"],"synonyms":[{"name":"CINCA","type":"related"},{"name":"CINCA syndrome","type":"exact"},{"name":"CINCA/NOMID","type":"exact"},{"name":"Cryopyrin-associated periodic syndrome 3","type":"related"},{"name":"IOMID","type":"related"},{"name":"IOMID syndrome","type":"exact"},{"name":"NOMID","type":"exact"},{"name":"NOMID syndrome","type":"exact"},{"name":"Neonatal-Onset Multisystem Inflammatory Disease","type":"exact"},{"name":"Prieur Griscelli syndrome","type":"related"},{"name":"Prieur-Griscelli syndrome","type":"exact"},{"name":"chronic infantile neurological cutaneous and articular syndrome","type":"exact"},{"name":"chronic infantile neurological cutaneous articular syndrome","type":"exact"},{"name":"chronic neurologic cutaneous and articular syndrome","type":"exact"},{"name":"cryopyrin-associated periodic syndrome 3","type":"exact"},{"name":"infantile onset multisystem inflammatory disease","type":"related"},{"name":"infantile-onset multisystem inflammatory disease","type":"exact"},{"name":"multisystem inflammatory disease, neonatal-onset","type":"related"},{"name":"neonatal onset multisystem inflammatory disease","type":"related"},{"name":"neonatal-onset multisystem inflammatory disease","type":"exact"}],"termid":"MONDO:0011776","xrefs":{"Monarch":{"xref_id":"0011776"}}}


id: MONDO:0006066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A variant of acinar prostate adenocarcinoma characterized by the presence of malignant cells with abundant xanthomatous appearing cytoplasm.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostatic acinar adenocarcinoma","termid":"MONDO:0002493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"acinar prostate adenocarcinoma, foamy gland variant","secondary_identifiers":["UMLS:C5787290","EFO:1000064","MEDGEN:1835068","NCIT:C39882"],"termid":"MONDO:0006066","xrefs":{"Monarch":{"xref_id":"0006066"}}}


id: GO:1903652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Modulation by an infecting virus of host cytoplasmic transport.","definition_xrefs":["GO_REF:0000063","GOC:TermGenie","PMID:25049409"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host cytoplasmic transport (obsolete GO:1903652)","synonyms":[{"name":"regulation by virus of host cytoplasmic streaming","type":"exact"},{"name":"regulation by virus of host cytoplasmic transport","type":"exact"},{"name":"viral modulation of host cytoplasmic trafficking","type":"exact"}],"termid":"GO:1903652"}


id: FYPO:0001415
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of sulfide:quinone oxidoreductase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"abnormal sulfide:quinone oxidoreductase activity","synonyms":[{"name":"abnormal sulfide-quinone reductase activity","type":"exact"},{"name":"abnormal sulfide:quinone reductase activity","type":"exact"},{"name":"abnormal sulphide:quinone oxidoreductase activity","type":"exact"}],"termid":"FYPO:0001415"}


id: PBO:0048819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 5 pseudogene 3","termid":"PBO:0048819"}


id: MONDO:0031646
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Braddock-Carey syndrome","secondary_identifiers":["OMIMPS:619980"],"termid":"MONDO:0031646","xrefs":{"Monarch":{"xref_id":"0031646"}}}


id: MONDO:0019736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dense deposit disease, a histological subtype of MPGN is an idiopathic chronic progressive kidney disorder distinguished by the presence of intra-membranous dense deposits in addition to immune complex subendothelial deposits in the glomerular capillary walls. This form often has a higher recurrence rate after a kidney transplant and is associated with extra-renal manifestations such as familial drusen.","definition_xrefs":["Orphanet:93571"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-immunoglobulin-mediated membranoproliferative glomerulonephritis","termid":"MONDO:0018013"},{"relation_name":"is_a","term_name":"primary membranoproliferative glomerulonephritis","termid":"MONDO:0018904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"dense deposit disease","secondary_identifiers":["MEDGEN:124345","NCIT:C123039","UMLS:C0268743","SCTID:722760002","NANDO:1200739","GARD:8555"],"synonyms":[{"name":"MPGN 2","type":"related"},{"name":"Mesangiocapillary glomerulonephritis type 2","type":"exact"},{"name":"glomerulonephritis membranoproliferative type 2","type":"related"},{"name":"membranoproliferative glomerulonephritis type 2","type":"exact"},{"name":"membranoproliferative glomerulonephritis type II","type":"related"}],"termid":"MONDO:0019736","xrefs":{"Monarch":{"xref_id":"0019736"}}}


id: RO:0002557
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"host_of","termid":"RO:0002453"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_pathogen","termid":"RO:0002557"}


id: PATO:0000236
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000236 odor type (obsolete PATO:0000236)","termid":"PATO:0000236"}


id: MONDO:0011019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the association of total alopecia (present at birth), mild intellectual deficit and hypergonadotropic hypogonadism.","definition_xrefs":["Orphanet:1014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alopecia-intellectual disability-hypergonadotropic hypogonadism syndrome","secondary_identifiers":["UMLS:C1832593","MEDGEN:321990","MESH:C563370","OMIM:601217","SCTID:720981000","GARD:16553"],"synonyms":[{"name":"Devriendt-Vandenberghe-Fryns syndrome","type":"exact"},{"name":"alopecia-intellectual disability syndrome with convulsions and hypergonadotropic hypogonadism","type":"related"},{"name":"alopecia-mental retardation syndrome with convulsions and hypergonadotropic hypogonadism","type":"related"}],"termid":"MONDO:0011019","xrefs":{"Monarch":{"xref_id":"0011019"}}}


id: FYPO:0003956
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A translation phenotype in which a tRNA pairs with mRNA at the stop codon UAA, and incorporates an amino acid residue into the nascent polypeptide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal translation","termid":"FYPO:0001797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"UAA suppression","synonyms":[{"name":"UAA suppressor","type":"exact"},{"name":"ochre suppression","type":"exact"},{"name":"ochre suppressor","type":"exact"}],"termid":"FYPO:0003956"}


id: PBO:0052277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 5D","termid":"PBO:0052277"}


id: MONDO:0011444
data:
  {"annotated_genes":["SJAG_04522","SJAG_01114","SJAG_02278","SJAG_04765"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84859,84860,84861,84862],"is_not":false,"summary":null,"term":"MONDO:0011444"}]},"cv_name":"mondo","definition":"Any Duane retraction syndrome in which the cause of the disease is a mutation in the CHN1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Duane retraction syndrome","termid":"MONDO:0007473"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01114":null,"SJAG_02278":null,"SJAG_04522":null,"SJAG_04765":null},"genotype_count":0,"is_obsolete":false,"name":"Duane retraction syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:128083007","GARD:9966","MEDGEN:196721","OMIM:604356","UMLS:C0751083"],"synonyms":[{"name":"CHN1 Duane retraction syndrome","type":"exact"},{"name":"DURS2","type":"related"},{"name":"Duane retraction syndrome 2","type":"exact"},{"name":"Duane retraction syndrome caused by mutation in CHN1","type":"exact"},{"name":"Duane retraction syndrome type 2","type":"exact"},{"name":"Duane syndrome type 2","type":"related"}],"termid":"MONDO:0011444","terms_by_termid":{"MONDO:0011444":null},"xrefs":{"Monarch":{"xref_id":"0011444"}}}


id: PBO:0068593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 44, pseudogene","termid":"PBO:0068593"}


id: GO:0002711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of T cell mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lymphocyte mediated immunity","termid":"GO:0002708"},{"relation_name":"is_a","term_name":"regulation of T cell mediated immunity","termid":"GO:0002709"},{"relation_name":"is_a","term_name":"positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002824"},{"relation_name":"positively_regulates","term_name":"T cell mediated immunity","termid":"GO:0002456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell mediated immunity","synonyms":[{"name":"activation of T cell mediated immunity","type":"narrow"},{"name":"positive regulation of T lymphocyte mediated immunity","type":"exact"},{"name":"positive regulation of T-cell mediated immunity","type":"exact"},{"name":"positive regulation of T-lymphocyte mediated immunity","type":"exact"},{"name":"stimulation of T cell mediated immunity","type":"narrow"},{"name":"up regulation of T cell mediated immunity","type":"exact"},{"name":"up-regulation of T cell mediated immunity","type":"exact"},{"name":"upregulation of T cell mediated immunity","type":"exact"}],"termid":"GO:0002711"}


id: FYPO:0007630
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the acetylation of lysine at position 9 of histone H3 at ribosomal DNA occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0000892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3-K9 acetylation at rDNA during vegetative growth","synonyms":[{"name":"increased histone H3-K9 acetylation at rDNA during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 acetylation at rDNA during vegetative growth","type":"exact"},{"name":"increased histone H3K9 acetylation at ribosomal DNA during vegetative growth","type":"exact"}],"termid":"FYPO:0007630"}


id: PBO:0083945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma-glutamyltranspeptidase; major glutathione-degrading enzyme; involved in detoxification of electrophilic xenobiotics; expression induced mainly by nitrogen starvation","termid":"PBO:0083945"}


id: PBO:0076891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 45","termid":"PBO:0076891"}


id: FYPO:0004616
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic microtubule depolymerization, i.e. the removal of tubulin dimers from a cytoplasmic microtubule, does not occur at the plus end of the microtubule at the cell tip. Normally, rapid depolymerization takes place when the growing plus end of the microtubule reaches the cell tip.","definition_xrefs":["PMID:15772152","GO:0070462","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule depolymerization during vegetative growth","termid":"FYPO:0000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished cytoplasmic microtubule depolymerization at plus end at cell tip","synonyms":[{"name":"abolished cytoplasmic microtubule depolymerisation at plus end at cell tip","type":"exact"},{"name":"abolished cytoplasmic microtubule depolymerization at plus end at cell end","type":"exact"},{"name":"abolished cytoplasmic microtubule depolymerization at plus end at cell tip during mitotic cell cycle","type":"related"},{"name":"abolished cytoplasmic microtubule depolymerization at plus end at cell tip during vegetative growth","type":"exact"},{"name":"abolished microtubule catastrophe at cell tip","type":"related"},{"name":"abolished microtubule plus end shrinkage at cell tip","type":"related"},{"name":"abolished plus-end specific microtubule depolymerization at cell tip","type":"exact"},{"name":"cytoplasmic microtubule depolymerization at plus end at cell tip abolished","type":"exact"}],"termid":"FYPO:0004616"}


id: PBO:0024478
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-Syndromic X-Linked Intellectual Disability","termid":"PBO:0024478"}


id: GO:0043816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tRNA(Cys) + O-phospho-L-serine + ATP = AMP + diphosphate + phosphoseryl-tRNA(Cys).","definition_xrefs":["PMID:17110438","RHEA:25678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0140101","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"phosphoserine-tRNA(Cys) ligase activity","secondary_identifiers":["EC:6.1.1.27"],"synonyms":[{"name":"O-phosphoseryl-tRNA(Cys) synthetase activity","type":"exact"},{"name":"SepRS","type":"related"},{"name":"phosphoserine--tRNA(Cys) ligase activity","type":"exact"},{"name":"phosphoserine-tRNACys ligase activity","type":"exact"}],"termid":"GO:0043816"}


id: PBO:0027239
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_streptothricin","termid":"PBO:0027239"}


id: PBO:0034241
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_structural_organization_of","termid":"PBO:0034241"}


id: GO:0097431
data:
  {"annotated_genes":["SJAG_02761","SJAG_02624"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99869,117638],"is_not":false,"summary":null,"term":"GO:0097431"}]},"cv_name":"cellular_component","definition":"Either of the ends of a mitotic spindle, a spindle that forms as part of mitosis, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole","termid":"GO:0000922"},{"relation_name":"part_of","term_name":"mitotic spindle","termid":"GO:0072686"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02624":null,"SJAG_02761":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0072686"}],"interesting_parent_ids":["GO:0015630","GO:0072686","GO:0005575"],"is_obsolete":false,"name":"mitotic spindle pole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097431","terms_by_termid":{"GO:0097431":null}}


id: PBO:0086991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Required for 25S rRNA maturation and 60S ribosomal subunit assembly; localizes to the nucleolus and in foci along nuclear periphery; constituent of 66S pre-ribosomal particles; cooperates with Rrs1p and Mps3p to mediate telomere clustering by binding Sir4p, but is not involved in telomere tethering","termid":"PBO:0086991"}


id: MONDO:1010000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A granulomatous disease caused by the aquatic organism pythium insidiosum occurring rarely in humans. It is classified into three forms: ocular, cutaneous, and arterial.","definition_xrefs":["MESH:D058968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pythiosis","secondary_identifiers":["GARD:11989","icd11.foundation:1571230529","MEDGEN:124447","UMLS:C0276912"],"synonyms":[{"name":"human pythiosis","type":"exact"},{"name":"pythium insidiosum infection","type":"exact"}],"termid":"MONDO:1010000","xrefs":{"Monarch":{"xref_id":"1010000"}}}


id: GO:0006513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Addition of a single ubiquitin group to a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein ubiquitination","termid":"GO:0016567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein monoubiquitination","synonyms":[{"name":"protein monoubiquitinylation","type":"exact"},{"name":"protein monoubiquitylation","type":"exact"}],"termid":"GO:0006513"}


id: FYPO:0008286
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 1-diphospho-1D-myo-inositol 2,3,4,5,6-pentakisphosphate (1-IP7) is normal (i.e. indistinguishable from wild type).","direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular myo-inositol level","termid":"FYPO:0008284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular 1-IP7 level","termid":"FYPO:0008286"}


id: PBO:0108709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation specific RabGEF Spo13","termid":"PBO:0108709"}


id: PBO:0043110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"component of inhibitor of nuclear factor kappa B kinase complex","termid":"PBO:0043110"}


id: PBO:0017596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase complex subunit Mug165","termid":"PBO:0017596"}


id: GO:0090250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of one cell to another cell via adhesion molecules that contributes to the establishment of planar cell polarity.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion via plasma-membrane adhesion molecules","termid":"GO:0098742"},{"relation_name":"part_of","term_name":"establishment of planar polarity","termid":"GO:0001736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell-cell adhesion involved in establishment of planar polarity","termid":"GO:0090250"}


id: MONDO:0012247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinocerebellar ataxia type 27 (SCA27) is a very rare subtype of type I autosomal dominant cerebellar ataxia (ADCA type I). It is characterized by early-onset tremor, dyskinesia, and slowly progressive cerebellar ataxia.","definition_xrefs":["Orphanet:98764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"spinocerebellar ataxia type 27","secondary_identifiers":["OMIM:609307","GARD:9963","icd11.foundation:1408059647","DOID:0050976","SCTID:719252002","MEDGEN:373075","UMLS:C1836383","MESH:C537204"],"synonyms":[{"name":"SCA27","type":"exact"},{"name":"cerebellar ataxia autosomal dominant FGF14-related","type":"related"},{"name":"cerebellar ataxia, autosomal dominant, Fgf14-related","type":"related"},{"name":"spinocerebellar ataxia 27","type":"related"},{"name":"spinocerebellar ataxia type 27","type":"exact"}],"termid":"MONDO:0012247","xrefs":{"Monarch":{"xref_id":"0012247"}}}


id: GO:0061084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of protein refolding. Protein refolding is the process carried out by a cell that restores the biological activity of an unfolded or misfolded protein, using helper proteins such as chaperones.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein refolding","termid":"GO:0061083"},{"relation_name":"is_a","term_name":"negative regulation of protein folding","termid":"GO:1903333"},{"relation_name":"negatively_regulates","term_name":"protein refolding","termid":"GO:0042026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006457"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006457"}],"interesting_parent_ids":["GO:0006457","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein refolding","termid":"GO:0061084"}


id: FYPO:0008205
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is increased during hypoxic stress.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to nucleus during vegetative growth","termid":"FYPO:0001130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to nucleus during hypoxia","termid":"FYPO:0008205"}


id: FYPO_EXT:1000000
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extensions","definition":"root of FYPO extension ontology","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYPO extension","termid":"FYPO_EXT:1000000"}


id: MONDO:0005036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the stomach","direct_ancestors":[{"relation_name":"is_a","term_name":"gastric carcinoma","termid":"MONDO:0004950"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"gastric adenocarcinoma","secondary_identifiers":["MEDGEN:82961","NCIT:C4004","Orphanet:464463","ONCOTREE:STAD","UMLS:C0278701","DOID:3717","SCTID:408647009","EFO:0000503"],"synonyms":[{"name":"STAD","type":"related"},{"name":"adenocarcinoma - stomach","type":"exact"},{"name":"adenocarcinoma of stomach","type":"exact"},{"name":"adenocarcinoma of the stomach","type":"exact"},{"name":"gastric (stomach) adenocarcinoma","type":"exact"},{"name":"gastric adenocarcinoma","type":"exact"},{"name":"stomach adenocarcinoma","type":"exact"}],"termid":"MONDO:0005036","xrefs":{"Monarch":{"xref_id":"0005036"}}}


id: PBO:0003641
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression autoregulated","termid":"PBO:0003641"}


id: PBO:0049861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heart development protein with EGF like domains 1","termid":"PBO:0049861"}


id: GO:0046070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dGTP, guanosine triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide metabolic process","termid":"GO:0009151"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside triphosphate metabolic process","termid":"GO:0009215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"dGTP metabolic process","synonyms":[{"name":"dGTP metabolism","type":"exact"}],"termid":"GO:0046070"}


id: PBO:0016527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin-protein ligase E3 (predicted)","termid":"PBO:0016527"}


id: GO:0036234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of glucuronic acid from a conjugated substrate.","definition_xrefs":["GOC:vk","PMID:22294686","PMID:8560473","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete deglucuronidation (obsolete GO:0036234)","termid":"GO:0036234"}


id: PBO:0077403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 138","termid":"PBO:0077403"}


id: PBO:0001868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit Mrp10 (predicted)","termid":"PBO:0001868"}


id: MONDO:0017694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glycogen storage disease due to acid maltase deficiency, infantile onset is the most severe form of glycogen storage disease due to acid maltase deficiency, characterized by cardiomegaly with respiratory distress, muscle weakness and feeding difficulties. It is often fatal.","definition_xrefs":["Orphanet:308552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease II","termid":"MONDO:0009290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0002561","MONDO:0005267"],"is_obsolete":false,"name":"glycogen storage disease due to acid maltase deficiency, infantile onset","secondary_identifiers":["UMLS:C3888924","NANDO:1200139","MEDGEN:923868","GARD:21310","icd11.foundation:1496243702","NANDO:2201229","SCTID:722302009"],"synonyms":[{"name":"GSD due to acid maltase deficiency, infantile onset","type":"exact"},{"name":"GSD type 2, infantile onset","type":"exact"},{"name":"GSD type II, infantile onset","type":"exact"},{"name":"Pompe disease, infantile onset","type":"exact"},{"name":"alpha-1,4-glucosidase acid deficiency, infantile onset","type":"exact"},{"name":"glycogen storage disease type 2, infantile onset","type":"exact"},{"name":"glycogen storage disease type II, infantile onset","type":"exact"},{"name":"glycogenosis due to acid maltase deficiency, infantile onset","type":"exact"},{"name":"glycogenosis type 2, infantile onset","type":"exact"},{"name":"glycogenosis type II, infantile onset","type":"exact"}],"termid":"MONDO:0017694","xrefs":{"Monarch":{"xref_id":"0017694"}}}


id: FYECO:0000413
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which valproic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ valproic acid","synonyms":[{"name":"valproic acid added","type":"exact"}],"termid":"FYECO:0000413"}


id: PBO:0042930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cingulin","termid":"PBO:0042930"}


id: PBO:0051724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitory synaptic factor 1","termid":"PBO:0051724"}


id: PBO:0061372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 32","termid":"PBO:0061372"}


id: PBO:0038601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with coiled-coil, ankyrin repeat and PH domains 2","termid":"PBO:0038601"}


id: GO:0051839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of the cytolysis by that organism of cells in its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation by host of cytolysis of symbiont cells (obsolete GO:0051839)","termid":"GO:0051839"}


id: PBO:0047582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor receptor 3 pseudogene 2","termid":"PBO:0047582"}


id: PBO:0068833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 71, pseudogene","termid":"PBO:0068833"}


id: GO:2000559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of CD24 biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycoprotein biosynthetic process","termid":"GO:0010559"},{"relation_name":"regulates","term_name":"CD24 biosynthetic process","termid":"GO:0035724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of CD24 production","synonyms":[{"name":"regulation of CD24 anabolism","type":"exact"},{"name":"regulation of CD24 biosynthesis","type":"exact"},{"name":"regulation of CD24 biosynthetic process","type":"exact"},{"name":"regulation of CD24 formation","type":"exact"},{"name":"regulation of CD24 synthesis","type":"exact"}],"termid":"GO:2000559"}


id: PBO:0081382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF222 divergent transcript","termid":"PBO:0081382"}


id: PBO:0044445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 23, pseudogene","termid":"PBO:0044445"}


id: PBO:0069146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 397, pseudogene","termid":"PBO:0069146"}


id: PBO:0028339
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_DNA_level","termid":"PBO:0028339"}


id: MONDO:0015015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital bile acid synthesis defect in which the cause of the disease is a mutation in the ACOX2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital bile acid synthesis defect","termid":"MONDO:0018841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"congenital bile acid synthesis defect 6","secondary_identifiers":["DOID:0111067","MEDGEN:934591","UMLS:C4310624","OMIM:617308"],"synonyms":[{"name":"ACOX2 congenital bile acid synthesis defect","type":"exact"},{"name":"CBAS6","type":"exact"},{"name":"bile acid synthesis defect, congenital, 6","type":"exact"},{"name":"bile acid synthesis defect, congenital, type 6","type":"exact"},{"name":"congenital bile acid synthesis defect caused by mutation in ACOX2","type":"exact"},{"name":"congenital bile acid synthesis defect type 6","type":"exact"}],"termid":"MONDO:0015015","xrefs":{"Monarch":{"xref_id":"0015015"}}}


id: PBO:0069464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 729, pseudogene","termid":"PBO:0069464"}


id: MONDO:0009553
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Plasmodium falciparum blood infection level (obsolete MONDO:0009553)","secondary_identifiers":["OMIM:248310"],"synonyms":[{"name":"Pfbi","type":"related"},{"name":"Plasmodium falciparum blood infection level","type":"exact"},{"name":"Plasmodium falciparum parasitemia","type":"related"},{"name":"malaria, intensity of infection","type":"exact"}],"termid":"MONDO:0009553","xrefs":{"Monarch":{"xref_id":"0009553"}}}


id: PBO:0108563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA recombination mediator Sfr1","termid":"PBO:0108563"}


id: GO:0033886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the 2- and 3-sulfate groups of the polysulfates of cellulose and charonin.","definition_xrefs":["EC:3.1.6.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"cellulose-polysulfatase activity","secondary_identifiers":["MetaCyc:3.1.6.7-RXN"],"synonyms":[{"name":"cellulose-sulfate sulfohydrolase activity","type":"related"}],"termid":"GO:0033886"}


id: SO:0002373
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for scaRNA possessing a box H/ACA sequence motif, guiding the pseudouridylation of snRNAs.","definition_xrefs":["PMID:17099227","PMID:24659245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scaRNA_gene","termid":"SO:0002339"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H_ACA_box_scaRNA_gene","synonyms":[{"name":"H/ACA scaRNA gene","type":"exact"}],"termid":"SO:0002373"}


id: PBO:0085093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear export factor, exportin; major karyopherin involved in export of proteins, RNAs, and ribosomal subunits from the nucleus","termid":"PBO:0085093"}


id: PBO:0051473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (IV)-59 (pseudogene)","termid":"PBO:0051473"}


id: PBO:0044182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catenin delta 2","termid":"PBO:0044182"}


id: GO:0061300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the vasculature of the cerebellum over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasculature development","termid":"GO:0001944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellum vasculature development","termid":"GO:0061300"}


id: FYPO:0004396
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which mitotic spindle elongation, i.e. the process of lengthening the distance between poles of the mitotic spindle, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0000022","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal mitotic spindle elongation","synonyms":[{"name":"normal mitotic spindle elongation during vegetative growth","type":"exact"},{"name":"normal spindle elongation during mitosis","type":"exact"},{"name":"normal spindle elongation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004396"}


id: GO:1905094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apolipoprotein A-I-mediated signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:25084135","GOC:bc","GO_REF:0000058","GOC:BHF_miRNA","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"apolipoprotein A-I-mediated signaling pathway","termid":"GO:0038027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of apolipoprotein A-I-mediated signaling pathway","synonyms":[{"name":"regulation of apolipoprotein A-I-mediated signalling pathway","type":"exact"}],"termid":"GO:1905094"}


id: MONDO:0016565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic genetic obesity (obsolete MONDO:0016565)","secondary_identifiers":["Orphanet:240371"],"synonyms":[{"name":"syndrome associated with obesity (disease)","type":"exact"},{"name":"syndromic obesity (disease)","type":"exact"}],"termid":"MONDO:0016565","xrefs":{"Monarch":{"xref_id":"0016565"}}}


id: GO:0060070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of Wnt signaling pathway in which Wnt binding to its receptor on the surface of a target cell results in the by propagation of the molecular signals via beta-catenin, and end with a change in transcription of target genes. In this pathway, the activated receptor signals via downstream effectors that result in the inhibition of beta-catenin phosphorylation, thereby preventing degradation of beta-catenin. Stabilized beta-catenin can then accumulate and travel to the nucleus to trigger changes in transcription of target genes.","definition_xrefs":["PMID:11532397","PMID:19619488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Wnt signaling pathway","termid":"GO:0016055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"canonical Wnt signaling pathway","secondary_identifiers":["Reactome:R-HSA-4641262"],"synonyms":[{"name":"Wnt receptor signaling pathway through beta-catenin","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin","type":"exact"},{"name":"canonical Wnt receptor signaling pathway","type":"exact"},{"name":"canonical Wnt-activated signaling pathway","type":"exact"},{"name":"frizzled-1 receptor signaling pathway","type":"narrow"}],"termid":"GO:0060070"}


id: GO:0002812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an antibacterial peptide with activity against Gram-negative bacteria.","definition_xrefs":["PMID:11807545","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibacterial peptide biosynthetic process","termid":"GO:0002780"},{"relation_name":"part_of","term_name":"defense response to Gram-negative bacterium","termid":"GO:0050829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"biosynthetic process of antibacterial peptides active against Gram-negative bacteria","termid":"GO:0002812"}


id: MONDO:1012091
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"gastric dilatation volvulus syndrome, non-human animal","termid":"MONDO:1011659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastric dilatation volvulus syndrome, dog","secondary_identifiers":["OMIA:000404-9615"],"termid":"MONDO:1012091","xrefs":{"Monarch":{"xref_id":"1012091"}}}


id: GO:1990444
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an F-box domain of a protein.","definition_xrefs":["PMID:12628165","InterPro:IPR001810","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"F-box domain binding","termid":"GO:1990444"}


id: PBO:0079094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 7-1","termid":"PBO:0079094"}


id: PBO:0042709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin EGF LAG seven-pass G-type receptor 1","termid":"PBO:0042709"}


id: MONDO:0006809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blocking of a blood vessel in the skull by an embolus which can be a blood clot (thrombus) or other undissolved material in the blood stream. Most emboli are of cardiac origin and are associated with heart diseases. Other non-cardiac sources of emboli are usually associated with vascular diseases.","definition_xrefs":["MESH:D020766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intracranial embolism","secondary_identifiers":["DOID:4372","ICD9:434.10","SCTID:75543006","MEDGEN:155710","EFO:1000991","ICD9:434.1","UMLS:C0752140"],"synonyms":[{"name":"cerebral embolism","type":"exact"},{"name":"cerebral embolism with cerebral infarction","type":"exact"}],"termid":"MONDO:0006809","xrefs":{"Monarch":{"xref_id":"0006809"}}}


id: PBO:0112998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha arrestin, substrate of calcineurin; controls nutrient-mediated intracellular sorting of permease Gap1p; interacts with AP-1 subunit Apl4p; dephosphorylation of Aly1p required for the endocytosis of Dip5p; may regulate endocytosis of plasma membrane proteins by recruiting ubiquitin ligase Rsp5p to plasma membrane targets; regulates intracellular pH; ALY1 has a paralog, ALY2, that arose from the whole genome duplication","termid":"PBO:0112998"}


id: PBO:0081274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 37C, pseudogene","termid":"PBO:0081274"}


id: FYPO:0000849
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in the cytoplasm of a cell is higher than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased cytoplasmic protein level during vegetative growth","synonyms":[{"name":"cytoplasmic accumulation of protein","type":"exact"},{"name":"cytoplasmic protein accumulation during vegetative growth","type":"exact"},{"name":"increased cytoplasmic protein level during mitotic cell cycle","type":"related"},{"name":"increased protein level in cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0000849"}


id: GO:0031780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a corticotropin hormone receptor.","definition_xrefs":["GOC:dph","GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocortin receptor binding","termid":"GO:0031779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"corticotropin hormone receptor binding","secondary_identifiers":["GO:0071856"],"synonyms":[{"name":"ACTH receptor binding","type":"exact"},{"name":"adrenocorticotropic hormone receptor ligand","type":"narrow"},{"name":"adrenocorticotropin hormone receptor binding","type":"exact"},{"name":"adrenocorticotropin receptor binding","type":"exact"},{"name":"corticotropin receptor binding","type":"exact"}],"termid":"GO:0031780"}


id: PBO:0055607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3046","termid":"PBO:0055607"}


id: MONDO:0021512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the thymus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign endocrine neoplasm","termid":"MONDO:0000627"},{"relation_name":"is_a","term_name":"immune system organ benign neoplasm","termid":"MONDO:0000630"},{"relation_name":"is_a","term_name":"thymus neoplasm","termid":"MONDO:0005197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"benign neoplasm of thymus","secondary_identifiers":["MEDGEN:87526","UMLS:C0345975","icd11.foundation:1583331018","ICD9:212.6","ICD10CM:D15.0","NCIT:C4458","SCTID:92437008"],"synonyms":[{"name":"benign Thymus neoplasm","type":"exact"},{"name":"benign Thymus tumor","type":"exact"},{"name":"benign Thymus tumour","type":"exact"},{"name":"benign neoplasm of the Thymus","type":"exact"},{"name":"benign thymic neoplasm","type":"exact"},{"name":"benign thymic tumor","type":"exact"},{"name":"benign thymic tumour","type":"exact"},{"name":"benign tumor of Thymus","type":"exact"},{"name":"benign tumor of the Thymus","type":"exact"},{"name":"benign tumour of Thymus","type":"exact"},{"name":"benign tumour of the Thymus","type":"exact"},{"name":"thymus benign neoplasm","type":"exact"}],"termid":"MONDO:0021512","xrefs":{"Monarch":{"xref_id":"0021512"}}}


id: FYPO:0003482
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein is localized to discrete regions in the cytoplasm, visible as foci or dots by microscopy, to a greater extent observed than in normal (wild type) cells.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased punctate cytoplasmic protein localization","synonyms":[{"name":"increased protein localization to cytoplasmic puncta","type":"exact"},{"name":"increased punctate cytoplasmic protein localisation","type":"exact"},{"name":"increased punctate cytoplasmic protein localization during mitotic cell cycle","type":"related"},{"name":"increased punctate cytoplasmic protein localization during vegetative growth","type":"exact"}],"termid":"FYPO:0003482"}


id: PBO:0061921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily F member 1","termid":"PBO:0061921"}


id: GO:0099562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which maintains the organization and the arrangement of proteins in the presynaptic density.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of postsynaptic specialization structure","termid":"GO:0098880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of postsynaptic density structure","termid":"GO:0099562"}


id: PBO:0052560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kynurenine 3-monooxygenase","termid":"PBO:0052560"}


id: PR:000027557
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A.2 phosphorylated 2 in Schizosaccharomyces pombe. Example: UniProtKB:P04910-1, Ser-122, MOD:00046.","definition_xrefs":["PomBase:MAH","PMID:19965387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A-beta (Schizosaccharomyces pombe 972h-)","termid":"PR:P04910"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hta2/Phos:(S121)","pombase_gene_id":"SPAC19G12.06c","synonyms":[{"name":"PomBase_original_PRO_term_name: histone H2A.2 phosphorylated 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-HTA2/Phos:2","type":"exact"},{"name":"hta2/Phos:(S121)","type":"exact"},{"name":"hta2/Phos:(S122)","type":"exact"}],"termid":"PR:000027557"}


id: MONDO:0011781
data:
  {"annotated_genes":["SJAG_00421"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85249],"is_not":false,"summary":null,"term":"MONDO:0011781"}]},"cv_name":"mondo","definition":"A rare subtype of type I autosomal dominant cerebellar ataxia (ADCA type I). It is characterized by a variable clinical picture which can include dementia, psychiatric disorders, parkinsonism, dystonia, chorea, spasticity, and epilepsy.","definition_xrefs":["Orphanet:98759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebelloparenchymal disorder","termid":"MONDO:0000114"},{"relation_name":"is_a","term_name":"Huntington disease-like syndrome","termid":"MONDO:0015548"},{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00421":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"spinocerebellar ataxia type 17","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1173627424","OMIM:164700","MESH:C565866","GARD:10469","NCIT:C179861","DOID:0050967","OMIM:213100","MEDGEN:337637","OMIM:607136","SCTID:719249005","UMLS:C1846707","MESH:C564616","MESH:C563505"],"synonyms":[{"name":"CPD, late-onset recessive type","type":"related"},{"name":"CPD2","type":"exact"},{"name":"HDL4","type":"exact"},{"name":"Huntington disease-like 4","type":"exact"},{"name":"OPCA V","type":"exact"},{"name":"OPCA with dementia and extrapyramidal signs","type":"exact"},{"name":"SCA 17","type":"exact"},{"name":"SCA17","type":"exact"},{"name":"cerebelloparenchymal disorder II","type":"exact"},{"name":"olivopontocerebellar atrophy 5","type":"exact"},{"name":"olivopontocerebellar atrophy V","type":"related"},{"name":"olivopontocerebellar atrophy type 5","type":"exact"},{"name":"spinocerebellar ataxia 17","type":"exact"},{"name":"spinocerebellar ataxia type 17","type":"exact"}],"termid":"MONDO:0011781","terms_by_termid":{"MONDO:0011781":null},"xrefs":{"Monarch":{"xref_id":"0011781"}}}


id: GO:1905067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of canonical Wnt signaling pathway involved in heart development.","definition_xrefs":["GOC:BHF_miRNA","GOC:bc","GOC:BHF","GO_REF:0000058","PMID:25034767","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of canonical Wnt signaling pathway involved in heart development (obsolete GO:1905067)","synonyms":[{"name":"down regulation of canonical Wnt receptor signaling pathway involved in heart development","type":"exact"},{"name":"down regulation of canonical Wnt receptor signalling pathway involved in heart development","type":"exact"},{"name":"down regulation of canonical Wnt signaling pathway involved in heart development","type":"exact"},{"name":"down regulation of canonical Wnt-activated signaling pathway involved in heart development","type":"exact"},{"name":"down-regulation of canonical Wnt receptor signaling pathway involved in heart development","type":"exact"},{"name":"down-regulation of canonical Wnt receptor signalling pathway involved in heart development","type":"exact"},{"name":"down-regulation of canonical Wnt signaling pathway involved in heart development","type":"exact"},{"name":"down-regulation of canonical Wnt-activated signaling pathway involved in heart development","type":"exact"},{"name":"downregulation of canonical Wnt receptor signaling pathway involved in heart development","type":"exact"},{"name":"downregulation of canonical Wnt receptor signalling pathway involved in heart development","type":"exact"},{"name":"downregulation of canonical Wnt signaling pathway involved in heart development","type":"exact"},{"name":"downregulation of canonical Wnt-activated signaling pathway involved in heart development","type":"exact"},{"name":"inhibition of canonical Wnt receptor signaling pathway involved in heart development","type":"narrow"},{"name":"inhibition of canonical Wnt receptor signalling pathway involved in heart development","type":"narrow"},{"name":"inhibition of canonical Wnt signaling pathway involved in heart development","type":"narrow"},{"name":"inhibition of canonical Wnt-activated signaling pathway involved in heart development","type":"narrow"},{"name":"negative regulation of canonical Wnt receptor signaling pathway involved in heart development","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signalling pathway involved in heart development","type":"exact"},{"name":"negative regulation of canonical Wnt-activated signaling pathway involved in heart development","type":"exact"}],"termid":"GO:1905067"}


id: GO:0071505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mycophenolic acid stimulus.","definition_xrefs":["GOC:mah","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mycophenolic acid","synonyms":[{"name":"response to mycophenolate","type":"exact"}],"termid":"GO:0071505"}


id: MONDO:0021227
data:
  {"annotated_genes":["SJAG_01671","SJAG_03920","SJAG_02398","SJAG_00260","SJAG_03429","SJAG_01895"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"},{"annotations":[85333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008192"},{"annotations":[86508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011121"},{"annotations":[86418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011544"},{"annotations":[85121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007273"},{"annotations":[85330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013602"}]},"cv_name":"mondo","definition":"A neoplasm (disease) that involves the adrenal gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine gland neoplasm","termid":"MONDO:0002082"},{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null,"SJAG_01895":null,"SJAG_02398":null,"SJAG_03429":null,"SJAG_03920":null},"genotype_count":0,"is_obsolete":false,"name":"adrenal gland neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ONCOTREE:ADRENALGLAND","NCIT:C2859","GARD:19765","Orphanet:100091","UMLS:C0001624","MEDGEN:1352","EFO:0003850"],"synonyms":[{"name":"ADRENALGLAND","type":"related"},{"name":"adrenal gland neoplasm (disease)","type":"exact"},{"name":"adrenal gland tumor","type":"exact"},{"name":"adrenal gland tumour","type":"exact"},{"name":"adrenal neoplasm","type":"exact"},{"name":"adrenal neoplasms","type":"exact"},{"name":"adrenal tumor","type":"exact"},{"name":"adrenal tumour","type":"exact"},{"name":"adrenal/paraganglial tumor","type":"related"},{"name":"adrenal/paraganglial tumour","type":"related"},{"name":"neoplasm of adrenal gland","type":"exact"},{"name":"neoplasm of the adrenal gland","type":"exact"},{"name":"tumor of adrenal gland","type":"exact"},{"name":"tumor of the adrenal gland","type":"exact"},{"name":"tumour of adrenal gland","type":"exact"},{"name":"tumour of the adrenal gland","type":"exact"}],"termid":"MONDO:0021227","terms_by_termid":{"MONDO:0007273":null,"MONDO:0008192":null,"MONDO:0009050":null,"MONDO:0011121":null,"MONDO:0011544":null,"MONDO:0013602":null},"xrefs":{"Monarch":{"xref_id":"0021227"}}}


id: PBO:0000866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA/biotin carboxylase","termid":"PBO:0000866"}


id: GO:0032094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a food stimulus; food is anything which, when taken into the body, serves to nourish or build up the tissues or to supply body heat.","definition_xrefs":["ISBN:0721601464","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nutrient levels","termid":"GO:0031667"},{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to food","termid":"GO:0032094"}


id: PBO:0113059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of small ribosomal subunit (SSU) processome; interacts with the U3 snoRNA (Snr17a/b); involved in rRNA processing and maturation; required post-transcriptionally for efficient retrotransposition; absence results in decreased Ty1 Gag:GFP protein levels; originally isolated as bud-site selection mutant that displays a random budding pattern; ortholog of human NOL7","termid":"PBO:0113059"}


id: PBO:0040429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP6V0E2 antisense RNA 1","termid":"PBO:0040429"}


id: PBO:0073076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDE2 telomere maintenance homolog","termid":"PBO:0073076"}


id: MONDO:0016670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic hemoglobinopathy characterized by all the characteristics of sickle cell anemia (SCA). Clinical course is similar to SCA, including acute episodes of pain, splenic infarction and splenic sequestration crisis, vaso-occlusive crisis, acute chest syndrome, ischemic brain injury, osteomyelitis and avascular bone necrosis. The genotype is characterized by an HbS allele in combination with the HbD variant, beta121Glu>Gln.","definition_xrefs":["Orphanet:251370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inherited hemoglobinopathy","termid":"MONDO:0019050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"sickle cell-hemoglobin d disease syndrome","secondary_identifiers":["GARD:12458","MedDRA:10056724","MEDGEN:452366","UMLS:C0272084"],"synonyms":[{"name":"HbSD disease","type":"exact"},{"name":"sickle cell - haemoglobin D disease","type":"related"},{"name":"sickle cell - hemoglobin D disease","type":"related"}],"termid":"MONDO:0016670","xrefs":{"Monarch":{"xref_id":"0016670"}}}


id: MONDO:0015618
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic pancreatic disease (obsolete MONDO:0015618)","secondary_identifiers":["Orphanet:165661"],"termid":"MONDO:0015618","xrefs":{"Monarch":{"xref_id":"0015618"}}}


id: FYPO:0000263
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype in which regulation of translation in response to stress is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to stress","termid":"FYPO:0000162"},{"relation_name":"is_a","term_name":"translation regulation phenotype","termid":"FYPO:0000289"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000298","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal regulation of translation in response to stress","synonyms":[{"name":"protein synthesis after stress, defective","type":"related"}],"termid":"FYPO:0000263"}


id: GO:0019658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glucose to lactate and acetate, yielding energy in the form of ATP.","definition_xrefs":["MetaCyc:P124-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate metabolic process","termid":"GO:0006083"},{"relation_name":"is_a","term_name":"glucose catabolic process to lactate","termid":"GO:0019659"},{"relation_name":"is_a","term_name":"non-glycolytic fermentation","termid":"GO:0019662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150","GO:0006091"],"is_obsolete":false,"name":"glucose fermentation to lactate and acetate","synonyms":[{"name":"bifidum pathway","type":"exact"},{"name":"glucose catabolic process to lactate and acetate","type":"broad"}],"termid":"GO:0019658"}


id: MONDO:0008105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nose, anomalous shape of","secondary_identifiers":["MESH:C538354","MEDGEN:331668","OMIM:164000","UMLS:C1834118"],"synonyms":[{"name":"nose, anomalous shape of","type":"exact"},{"name":"potato Nose","type":"related"}],"termid":"MONDO:0008105","xrefs":{"Monarch":{"xref_id":"0008105"}}}


id: PBO:0065185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PROSER2 antisense RNA 1","termid":"PBO:0065185"}


id: PBO:0052812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 78","termid":"PBO:0052812"}


id: GO:0071814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein-lipid complex, any macromolecular complex that contains both protein and lipid molecules.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"protein-lipid complex binding","termid":"GO:0071814"}


id: PBO:0047017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A20, pseudogene","termid":"PBO:0047017"}


id: PBO:0081347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 155","termid":"PBO:0081347"}


id: PBO:0074837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 31B","termid":"PBO:0074837"}


id: MONDO:0004078
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intrahepatic cholangiocarcinoma that produces abundant mucin.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrahepatic bile duct mucinous adenocarcinoma","termid":"MONDO:0002739"},{"relation_name":"is_a","term_name":"intrahepatic cholangiocarcinoma","termid":"MONDO:0003210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"mucinous intrahepatic cholangiocarcinoma","secondary_identifiers":["DOID:7024","UMLS:C1513718","MEDGEN:270842","NCIT:C41618"],"synonyms":[{"name":"mucin-producing intrahepatic cholangiocarcinoma","type":"exact"},{"name":"mucinous intrahepatic cholangiocarcinoma","type":"exact"}],"termid":"MONDO:0004078","xrefs":{"Monarch":{"xref_id":"0004078"}}}


id: PBO:0071966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase A5","termid":"PBO:0071966"}


id: PBO:0027967
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_dimethylation_at_telomere","termid":"PBO:0027967"}


id: MONDO:0007299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Sotos syndrome 1 (obsolete MONDO:0007299)","termid":"MONDO:0007299","xrefs":{"Monarch":{"xref_id":"0007299"}}}


id: GO:0103081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-(3'-methylthio)propylmalate = H+ + 2-oxo-6-methylthiohexanoate + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete methylthiopropylmalate dehydrogenase activity (obsolete GO:0103081)","termid":"GO:0103081"}


id: PBO:0067778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 78","termid":"PBO:0067778"}


id: PBO:0071349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 7","termid":"PBO:0071349"}


id: MONDO:0017877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brazilian hemorrhagic fever, caused by the Sabia virus (a newly discovered arenavirus), is a viral hemorrhagic fever, believed to originate from Sao Paulo, Brazil, with only 3 reported cases (2 of which were due to laboratory accidents) to date, characterized by fever, nausea vomiting myalgia tremors, and hemorragic manifestations such as conjunctival petechia and haematemesis, leading potentially to shock, coma and death.","definition_xrefs":["Orphanet:319239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral hemorrhagic fever","termid":"MONDO:0018087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brazilian hemorrhagic fever","secondary_identifiers":["UMLS:C0343633","GARD:21414","DOID:0050197","SCTID:240524001","MEDGEN:575736"],"synonyms":[{"name":"Sabia hemorrhagic fever","type":"exact"}],"termid":"MONDO:0017877","xrefs":{"Monarch":{"xref_id":"0017877"}}}


id: FYPO:0004565
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription of pheromone response genes is increased. Pheromone response genes are normally transcribed in response to a pheromone stimulus.","definition_xrefs":["PomBase:al","PomBase:mah","PMID:15580593"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000294","FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased transcription of pheromone response gene mRNA during vegetative growth","synonyms":[{"name":"increased transcription of pheromone response gene RNA during vegetative growth","type":"exact"},{"name":"increased transcription of pheromone response gene mRNA during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004565"}


id: GO:0018151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-histidine and peptidyl-tyrosine to form a protein cross-link.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-histidyl-L-tyrosine (obsolete GO:0018151)","termid":"GO:0018151"}


id: PBO:0049841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEAT repeat containing 4","termid":"PBO:0049841"}


id: GO:0019520
data:
  {"annotated_genes":["SJAG_00633","SJAG_03852"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111067,97684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019521"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving aldonic acid, a monocarboxylic acid with a chain of three or more carbon atoms, derived from an aldose by oxidation of the aldehydic group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00633":null,"SJAG_03852":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"aldonic acid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"aldonic acid metabolism","type":"exact"}],"termid":"GO:0019520","terms_by_termid":{"GO:0019521":null}}


id: MONDO:0016755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intraneural or extraneural neoplasm arising from nerve tissues and neural sheaths. It is composed of perineurial-like fibroblasts and Schwann cells. It usually presents as a localized cutaneous lesion and less often as a circumscribed peripheral nerve mass. Patients with neurofibromatosis type 1 present with multiple masses. Neurofibromas which arise from major nerves and plexiform neurofibromas are precursor lesions to malignant peripheral nerve sheath tumors.","definition_xrefs":["NCIT:C3272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nerve sheath neoplasm","termid":"MONDO:0002547"},{"relation_name":"is_a","term_name":"benign peripheral nerve sheath tumor","termid":"MONDO:0016752"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibroma","secondary_identifiers":["DOID:962","MEDGEN:45058","GARD:7191","SCTID:404029005","ICD9:215.9","ONCOTREE:NFIB","ICDO:9540/0","UMLS:C0027830","MESH:D009455","Orphanet:252183","MedDRA:10029267","icd11.foundation:221014277"],"synonyms":[{"name":"NFIB","type":"related"},{"name":"neurofibroma","type":"exact"},{"name":"neurofibroma (WHO grade I)","type":"exact"},{"name":"neurofibroma, benign","type":"exact"}],"termid":"MONDO:0016755","xrefs":{"Monarch":{"xref_id":"0016755"}}}


id: MOD:00451
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a propanoyl group.","definition_xrefs":["Unimod:58#N-term","PubMed:12175151","PubMed:11857757","PubMed:11999733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propanoylated residue","termid":"MOD:01894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amino propanoylated residue","synonyms":[{"name":"Propionate labeling reagent light form (N-term & K)","type":"related"},{"name":"Propionyl","type":"related"}],"termid":"MOD:00451"}


id: PATO:0000926
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000926 intercross fertility (obsolete PATO:0000926)","termid":"PATO:0000926"}


id: PBO:0113147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor for Gpa1p; amplifies G-protein signaling; subunit of the GET complex involved in ATP-dependent Golgi-to-ER trafficking; binds as a dimer to the transmembrane domain of tail-anchored proteins in the cytosol, shielding them from aqueous solvent until the Get1p/Get2p heterodimer releases the substrate and inserts it into the ER membrane; acts as a chaperone under ATP-depleted oxidative stress conditions; protein abundance increases under DNA replication stress","termid":"PBO:0113147"}


id: SO:0001273
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified adenine is an adenine base feature that has been altered.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_RNA_base_feature","termid":"SO:0000250"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_adenosine","synonyms":[{"name":"modified adenosine","type":"exact"}],"termid":"SO:0001273"}


id: PBO:0090384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone chaperone, CENP-A recruiting complex Mis16","termid":"PBO:0090384"}


id: PBO:0064068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 102","termid":"PBO:0064068"}


id: PBO:0042183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin B1 interacting protein 1 pseudogene 3","termid":"PBO:0042183"}


id: FYPO:0003817
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 5'-3' DNA helicase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"},{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000002","FYPO:0000654","FYPO:0000661","FYPO:0000641"],"is_obsolete":false,"name":"abnormal 5'-3' DNA helicase activity","termid":"FYPO:0003817"}


id: GO:0061961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency or rate of heme oxygenase activity.","definition_xrefs":["GOC:BHF_miRNA","GOC:BHF","GOC:rph","PMID:24844779"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of heme oxygenase activity (obsolete GO:0061961)","termid":"GO:0061961"}


id: MONDO:0003170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An astrocytic tumor affecting young people. Morphologically, it is characterized by the presence of collagenous tissue surrounding neoplastic astrocytes. In some cases the collagen is produced by the tumor cells (desmoplastic astrocytoma), whereas in others it is produced by mesenchymal cells (mixed glioma/fibroma).","definition_xrefs":["NCIT:C5419"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"astrocytoma (excluding glioblastoma)","termid":"MONDO:0019781"},{"relation_name":"is_a","term_name":"astrocytic tumor","termid":"MONDO:0021636"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gliofibroma","secondary_identifiers":["ICDO:9442/1","UMLS:C1266178","MEDGEN:226850","DOID:4856"],"synonyms":[{"name":"gliofibroma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003170","xrefs":{"Monarch":{"xref_id":"0003170"}}}


id: GO:0042064
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cell adhesion receptor regulator activity (obsolete GO:0042064)","synonyms":[{"name":"cell adhesion receptor regulator activity","type":"exact"}],"termid":"GO:0042064"}


id: GO:0006755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete carbamoyl phosphate-ADP transphosphorylation (obsolete GO:0006755)","synonyms":[{"name":"carbamoyl phosphate-ADP transphosphorylation","type":"exact"}],"termid":"GO:0006755"}


id: PBO:0052059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysyl-tRNA synthetase 1 pseudogene 3","termid":"PBO:0052059"}


id: PBO:0068617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 69, pseudogene","termid":"PBO:0068617"}


id: PBO:0063982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 16","termid":"PBO:0063982"}


id: PBO:0077006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 12 pseudogene 8","termid":"PBO:0077006"}


id: GO:0052855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6S)-6beta-hydroxy-1,4,5,6-tetrahydronicotinamide adenine dinucleotide + ADP = AMP + H+ + NAD(P)H + phosphate.","definition_xrefs":["EC:4.2.1.136","PMID:21994945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"ADP-dependent NAD(P)H-hydrate dehydratase activity","synonyms":[{"name":"(6S)-beta-6-hydroxy-1,4,5,6-tetrahydronicotinamide-adenine-dinucleotide hydro-lyase (ADP-hydrolysing)","type":"related"},{"name":"(6S)-beta-6-hydroxy-1,4,5,6-tetrahydronicotinamide-adenine-dinucleotide hydro-lyase(ADP-hydrolysing; NADH-forming)","type":"related"},{"name":"ADP-dependent H(4)NAD(P)OH dehydratase activity","type":"exact"},{"name":"ADP-dependent H4NAD(P)OH dehydratase activity","type":"exact"}],"termid":"GO:0052855"}


id: PBO:0018201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-X homolog, FANCM-MHF complex subunit Mhf2","termid":"PBO:0018201"}


id: MONDO:0011148
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spondylospinal thoracic dysostosis is an extremely rare skeletal disorder characterized bya short, curved spine and fusion of the spinous processes, short thorax with 'crab-like' configuration of the ribs, underdevelopment of the lungs (pulmonary hypoplasia), severe arthrogryposis and multiple pterygia (webbing of the skin across joints), and underdevelopment of the bones of the mouth.This condition is believed to be inherited in an autosomal recessive manner.It does notappear to be compatible with life.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spondylospinal thoracic dysostosis","secondary_identifiers":["UMLS:C1866184","OMIM:601809","MEDGEN:400937","MESH:C566622"],"synonyms":[{"name":"spondylospinal thoracic dysostosis","type":"exact"}],"termid":"MONDO:0011148","xrefs":{"Monarch":{"xref_id":"0011148"}}}


id: FYPO:0004248
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the vacuolar membrane is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to vacuole","termid":"FYPO:0007058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to vacuolar membrane","synonyms":[{"name":"normal protein localisation to vacuolar membrane","type":"exact"},{"name":"normal protein localization in vacuolar membrane","type":"exact"},{"name":"normal protein localization to vacuolar membrane during mitotic cell cycle","type":"related"},{"name":"normal protein localization to vacuolar membrane during vegetative growth","type":"exact"},{"name":"normal protein localization to vacuole membrane","type":"exact"}],"termid":"FYPO:0004248"}


id: SO:0001127
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of four or five consecutive residues and one H-bond in which: residue(i) is Serine (S) or Threonine (T), the side-chain OH of residue(i) is H-bonded to the main-chain CO of residue(i3) or (i4), Phi angles of residues(i1), (i2) and (i3) are negative.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"serine_threonine_staple_motif","secondary_identifiers":["BS:00230"],"synonyms":[{"name":"serine threonine staple motif","type":"exact"},{"name":"st_staple","type":"exact"}],"termid":"SO:0001127"}


id: FYECO:0000277
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which bleomycin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ bleomycin","termid":"FYECO:0000277"}


id: PBO:0077418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 154","termid":"PBO:0077418"}


id: GO:0046323
data:
  {"annotated_genes":["SJAG_03608","SJAG_00057"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110136,113669],"is_not":false,"summary":null,"term":"GO:0046323"}]},"cv_name":"biological_process","definition":"The directed movement of the hexose monosaccharide D-glucose into a cell or organelle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-glucose transmembrane transport","termid":"GO:1904659"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"D-glucose import","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Glucose_uptake"],"synonyms":[{"name":"glucose import","type":"exact"},{"name":"glucose uptake","type":"exact"}],"termid":"GO:0046323","terms_by_termid":{"GO:0046323":null}}


id: PBO:0044775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 56","termid":"PBO:0044775"}


id: PATO:0002522
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer having an elongate structure, similar to a ridge, that extends longitudinally along an anatomical entity.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keel-shaped","termid":"PATO:0002522"}


id: PBO:0055718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leishmanolysin like peptidase","termid":"PBO:0055718"}


id: MONDO:0016296
data:
  {"annotated_genes":["SJAG_00321","SJAG_03418","SJAG_03597","SJAG_03698"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032787"},{"annotations":[85381,85382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026763"},{"annotations":[86479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030886"}]},"cv_name":"mondo","definition":"Holoprosencephaly (HPE) is a complex brain malformation resulting from incomplete cleavage of the prosencephalon, occurring between the 18th and 28th day of gestation, and affecting both the forebrain and face, which results in neurological manifestations and facial anomalies of variable severity.","definition_xrefs":["Orphanet:2162"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"non-acquired combined pituitary hormone deficiency","termid":"MONDO:0018762"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00321":null,"SJAG_03418":null,"SJAG_03597":null,"SJAG_03698":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"holoprosencephaly","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:6665","MESH:D016142","NANDO:2200819","OMIMPS:236100","ICD10CM:Q04.2","icd11.foundation:1712699129","DOID:4621","NCIT:C74988","MedDRA:10056304","NORD:1247","SCTID:30915001","UMLS:C0079541","MEDGEN:38214"],"synonyms":[{"name":"HPE","type":"exact"},{"name":"holoprosencephaly sequence","type":"exact"}],"termid":"MONDO:0016296","terms_by_termid":{"MONDO:0026763":null,"MONDO:0030886":null,"MONDO:0032787":null},"xrefs":{"Monarch":{"xref_id":"0016296"}}}


id: PBO:0079082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-iMet (anticodon CAT) 3-1","termid":"PBO:0079082"}


id: GO:0051086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of assisting in the correct noncovalent assembly of posttranslational proteins and does not depend on additional protein cofactors. This function occurs over one or more cycles of nucleotide-dependent binding and release.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"'de novo' post-translational protein folding","termid":"GO:0051084"},{"relation_name":"is_a","term_name":"chaperone-mediated protein folding","termid":"GO:0061077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006457"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006457","GO:0051604"],"is_obsolete":false,"name":"chaperone mediated protein folding independent of cofactor","secondary_identifiers":["Reactome:R-HSA-390450"],"synonyms":[{"name":"chaperone cofactor-independent protein folding","type":"exact"}],"termid":"GO:0051086"}


id: SO:0001575
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A splice variant that changes the 2 base pair region at the 5' end of an intron.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_site_variant","termid":"SO:0001629"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_donor_variant","secondary_identifiers":["http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp","http://snpeff.sourceforge.net/SnpEff_manual.html","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"Jannovar:splice_donor_variant","type":"exact"},{"name":"Seattleseq:splice-donor","type":"exact"},{"name":"VAAST:splice_donor_variant","type":"exact"},{"name":"VEP:splice_donor_variant","type":"exact"},{"name":"snpEff:SPLICE_SITE_DONOR","type":"exact"},{"name":"splice donor variant","type":"exact"}],"termid":"SO:0001575"}


id: SO:0001431
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is not transcribed under normal conditions and is not critical to normal cellular functioning.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"cryptic","termid":"SO:0000976"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic_gene","synonyms":[{"name":"cryptic gene","type":"exact"}],"termid":"SO:0001431"}


id: PBO:0060406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 20, NatB catalytic subunit","termid":"PBO:0060406"}


id: MONDO:0008699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Achalasia-microcephaly is an extremely rare genetic syndrome, reported in a few families to date, characterized by the association of microcephaly, intellectual deficit and achalasia (with symptoms of coughing, dysphagia, vomiting, failure to thrive and aspiration appearing in infancy/early-childhood). Antenatal exposure to Mefloquine was reported in one simplex case. An autosomal recessive inheritance has been proposed.","definition_xrefs":["Orphanet:929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"achalasia microcephaly syndrome","secondary_identifiers":["OMIM:200450","GARD:456","UMLS:C1860212","SCTID:718573009","DOID:0050796","MESH:C536010","MEDGEN:349753"],"synonyms":[{"name":"achalasia microcephaly","type":"exact"},{"name":"achalasia-microcephaly syndrome","type":"exact"}],"termid":"MONDO:0008699","xrefs":{"Monarch":{"xref_id":"0008699"}}}


id: GO:0036451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Methylation of the 2'-O-ribose of the first or second transcribed nucleotide of a 5'-capped mRNA.","definition_xrefs":["PMID:20713356","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete cap mRNA methylation (obsolete GO:0036451)","termid":"GO:0036451"}


id: GO:0160115
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The 3 protofilaments A11, A12, and A13 of the A tubule along with associated inner sheath microtuble inner proteins (MIPs), either in the lumen of the A tubule or of the B tubule, which stabilize these three filiments within the axonemal doublet microtubule. The ribbon protofilaments separate the lumens of the A and B tubules.","definition_xrefs":["GOC:krc","PMID:1262413","PMID:29430673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axonemal doublet microtubule","termid":"GO:0097545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"axonemal microtubule doublet ribbon","termid":"GO:0160115"}


id: PBO:0113132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG-nucleoporin component of central core of the nuclear pore complex; contributes directly to nucleocytoplasmic transport and maintenance of the nuclear pore complex (NPC) permeability barrier; involved in gene tethering at the nuclear periphery; relocalizes to the cytosol in response to hypoxia; Cdc5p-mediated phosphorylation leads to detachment and reattachment of nuclear basket during meiosis; both NUP1 and NUP60 are homologous to human NUP153","termid":"PBO:0113132"}


id: MONDO:0006953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The mother develops antibodies against red blood cell Rhesus antigens. This may lead to potential fetal adverse outcomes such as anemia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood group incompatibility","termid":"MONDO:0002901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Rh isoimmunization","secondary_identifiers":["EFO:1001159","MEDGEN:11224","DOID:4175","SCTID:44795003","MedDRA:10039016","UMLS:C0035404"],"synonyms":[{"name":"Rh incompatibility affecting management of mother","type":"exact"}],"termid":"MONDO:0006953","xrefs":{"Monarch":{"xref_id":"0006953"}}}


id: PBO:0052166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 14","termid":"PBO:0052166"}


id: GO:0071951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification process that results in the conversion of methionine charged on a tRNA(fMet) to N-formyl-methionine-tRNA(fMet).","definition_xrefs":["PMID:5337045","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"charged-tRNA amino acid modification","termid":"GO:0019988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"conversion of methionyl-tRNA to N-formyl-methionyl-tRNA","termid":"GO:0071951"}


id: PBO:0052810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 76","termid":"PBO:0052810"}


id: PBO:0074630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 25","termid":"PBO:0074630"}


id: MONDO:0008914
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardioauditory syndrome of Sanchez Cascos","secondary_identifiers":["MEDGEN:395233","OMIM:212100","MESH:C535577","UMLS:C1859329"],"synonyms":[{"name":"Sanchez Cascos cardioauditory syndrome","type":"related"},{"name":"cardioauditory syndrome of Sanchez Cascos","type":"exact"}],"termid":"MONDO:0008914","xrefs":{"Monarch":{"xref_id":"0008914"}}}


id: PBO:0065593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 9","termid":"PBO:0065593"}


id: PBO:0071656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 20","termid":"PBO:0071656"}


id: GO:0007188
data:
  {"annotated_genes":["SJAG_02311","SJAG_02481","SJAG_01254","SJAG_00266","SJAG_02426","SJAG_01245","SJAG_04312","SJAG_01699","SJAG_01754","SJAG_04026","SJAG_00472","SJAG_02444","SJAG_03081","SJAG_00574"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99934,101345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007189"},{"annotations":[105395,109008,116058,115027,93713,105984,101346,106333,108500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010619"},{"annotations":[115877],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0106072"},{"annotations":[92229,99936,115878,107458,91572],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0110034"}]},"cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway in which the signal is transmitted via the activation or inhibition of adenylyl cyclase activity and a subsequent change in the intracellular concentration of cyclic AMP (cAMP).","definition_xrefs":["GOC:signaling","GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00472":null,"SJAG_00574":null,"SJAG_01245":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02444":null,"SJAG_02481":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"adenylate cyclase-modulating G protein-coupled receptor signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"G protein signaling, coupled to cAMP nucleotide second messenger","type":"exact"},{"name":"G protein signaling, coupled to cyclic AMP nucleotide second messenger","type":"exact"},{"name":"G protein signalling, coupled to cAMP nucleotide second messenger","type":"exact"},{"name":"G protein signalling, coupled to cyclic AMP nucleotide second messenger","type":"exact"},{"name":"G-protein signaling, coupled to cAMP nucleotide second messenger","type":"exact"},{"name":"G-protein signaling, coupled to cyclic AMP nucleotide second messenger","type":"exact"},{"name":"G-protein signalling, coupled to cAMP nucleotide second messenger","type":"exact"},{"name":"G-protein signalling, coupled to cyclic AMP nucleotide second messenger","type":"exact"},{"name":"GPCR signaling pathway via cAMP second messenger","type":"exact"},{"name":"GPCR signaling pathway via modulation of adenylate cyclase activity","type":"exact"},{"name":"adenylate cyclase-modulating GPCR signaling pathway","type":"exact"}],"termid":"GO:0007188","terms_by_termid":{"GO:0007189":null,"GO:0010619":null,"GO:0106072":null,"GO:0110034":null}}


id: MONDO:0003754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brown-Sequard syndrome is a rare neurological condition that results from an injury or damage to one side of the spinal cord. This condition results in weakness or paralysis on one side of the body (hemiparaplegia) and a loss of sensation on the opposite side (hemianesthesia). Brown-Sequard syndrome most commonly occurs in the the thoracic spine (upper and middle back). There are several causes of Brown-Sequard syndrome, including: a spinal cord tumor, trauma (such as a puncture wound to the neck or back), infectious or inflammatory diseases (tuberculosis or multiple sclerosis), and disk herniation. Treatment for this condition varies depending on the underlying cause.","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"paraplegia","termid":"MONDO:0003757"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brown-Sequard syndrome","secondary_identifiers":["NCIT:C84601","DOID:606","EFO:1001279","MESH:D018437","ICD10CM:G83.81","SCTID:27982003","MEDGEN:69225","UMLS:C0242644"],"synonyms":[{"name":"Brown-Squard syndrome","type":"exact"},{"name":"Hemicord syndrome","type":"related"},{"name":"Hemiparaplegic syndrome","type":"related"},{"name":"Hemispinal cord syndrome","type":"related"}],"termid":"MONDO:0003754","xrefs":{"Monarch":{"xref_id":"0003754"}}}


id: GO:0047279
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycerol 3-phosphate + UDP-D-galactose = 1-O-alpha-D-galactosyl-sn-glycerol 3-phosphate + H+ + UDP.","definition_xrefs":["RHEA:20341","EC:2.4.1.96"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sn-glycerol-3-phosphate 1-galactosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R00854","MetaCyc:2.4.1.96-RXN"],"synonyms":[{"name":"UDP-Gal:sn-glycero-3-phosphoric acid 1-alpha-galactosyl-transferase activity","type":"related"},{"name":"UDP-galactose:sn-glycerol-3-phosphate 1-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:sn-glycerol-3-phosphate 1-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:sn-glycerol-3-phosphate alpha-D-galactosyltransferase activity","type":"related"},{"name":"glycerol 3-phosphate 1alpha-galactosyltransferase activity","type":"related"},{"name":"isofloridoside-phosphate synthase activity","type":"related"},{"name":"uridine diphosphogalactose-glycerol phosphate galactosyltransferase activity","type":"related"}],"termid":"GO:0047279"}


id: PBO:0053169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEF1 antisense RNA 1","termid":"PBO:0053169"}


id: PBO:0056882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS10 pseudogene 2","termid":"PBO:0056882"}


id: GO:0042781
data:
  {"annotated_genes":["SJAG_00997","SJAG_04885"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91641,109395],"is_not":false,"summary":null,"term":"GO:0042781"}]},"cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of RNA, removing extra 3' nucleotides from tRNA precursor, generating 3' termini of tRNAs. A 3'-hydroxy group is left at the tRNA terminus and a 5'-phosphoryl group is left at the trailer molecule.","definition_xrefs":["PMID:21208191","PMID:12032089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016891"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00997":null,"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0140101","GO:0140098","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"3'-tRNA processing endoribonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.1.26.11-RXN","EC:3.1.26.11"],"synonyms":[{"name":"3 tRNase activity","type":"related"},{"name":"3' tRNA processing endoribonuclease activity","type":"exact"},{"name":"3' tRNase activity","type":"exact"},{"name":"RNase Z activity","type":"broad"},{"name":"ribonuclease Z activity","type":"broad"},{"name":"tRNA 3 endonuclease activity","type":"related"},{"name":"tRNA 3' endonuclease activity","type":"exact"},{"name":"tRNAse Z","type":"related"}],"termid":"GO:0042781","terms_by_termid":{"GO:0042781":null}}


id: PBO:0077938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPX2 microtubule nucleation factor","termid":"PBO:0077938"}


id: GO:0071302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin B2 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin B2","termid":"GO:0033274"},{"relation_name":"is_a","term_name":"cellular response to vitamin","termid":"GO:0071295"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vitamin B2","synonyms":[{"name":"cellular response to riboflavin","type":"exact"}],"termid":"GO:0071302"}


id: PBO:0028936
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_polypeptone","termid":"PBO:0028936"}


id: MONDO:1010072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Factor X deficiency that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"factor X deficiency, non-human animal","secondary_identifiers":["OMIA:000362"],"termid":"MONDO:1010072","xrefs":{"Monarch":{"xref_id":"1010072"}}}


id: FYPO:0007234
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the central core of the centromeric region of a chromosome is normal (i.e. indistinguishable from wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to centromere during vegetative growth","termid":"FYPO:0002574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to centromere central core","synonyms":[{"name":"normal protein localisation to centromere central core","type":"exact"},{"name":"normal protein localization to centromere central core during mitotic cell cycle","type":"related"},{"name":"normal protein localization to centromere central core during vegetative growth","type":"exact"}],"termid":"FYPO:0007234"}


id: PBO:0004244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine decarboxylase proenzyme Spe2","termid":"PBO:0004244"}


id: GO:1902177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of an oxidative stress-induced intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GOC:mtg_apoptosis","PMID:11672522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidative stress-induced intrinsic apoptotic signaling pathway","termid":"GO:1902175"},{"relation_name":"is_a","term_name":"positive regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001244"},{"relation_name":"positively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to oxidative stress","termid":"GO:0008631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway","synonyms":[{"name":"activation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"narrow"},{"name":"positive regulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"up regulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"up-regulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"upregulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"}],"termid":"GO:1902177"}


id: PBO:0035939
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-S10_phosphorylation_during_vegetative_growth","termid":"PBO:0035939"}


id: GO:1990658
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transferase complex which is capable of transferring nitrogenous groups from one component to another.","definition_xrefs":["GOC:bhm","PMID:25417112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"transnitrosylase complex","synonyms":[{"name":"transferase complex, transferring nitrogenous groups","type":"exact"}],"termid":"GO:1990658"}


id: PBO:0082958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein involved in the regulation of enolase (ENO1); mRNA expression is induced by calcium shortage, copper deficiency (via Mac1p) and the presence of galactose (via Gal4p); mRNA expression is also regulated by the cell cycle","termid":"PBO:0082958"}


id: GO:0061981
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-3-hydroxykynurenine + H2O = 3-hydroxyanthranilate + L-alanine.","definition_xrefs":["PMID:17300176"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-hydroxykynureninase activity (obsolete GO:0061981)","termid":"GO:0061981"}


id: PBO:0017636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc ion transmembrane transporter Zhf1","termid":"PBO:0017636"}


id: GO:0001705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of ectoderm during gastrulation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of primary germ layer","termid":"GO:0001704"},{"relation_name":"part_of","term_name":"ectoderm development","termid":"GO:0007398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ectoderm formation","termid":"GO:0001705"}


id: PBO:0045640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 52 (pseudogene)","termid":"PBO:0045640"}


id: PBO:0030692
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_glutathione_disulfide_level","termid":"PBO:0030692"}


id: FYPO:0003630
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which U2-type prespliceosome assembly is abolished. The U2-type prespliceosome is formed by association of the 5' splice site with the U1 snRNP, while the branch point sequence is recognized by the U2 snRNP, and also contains other proteins.","definition_xrefs":["GO:0071004","GO:1903241","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mRNA splicing, via spliceosome","termid":"FYPO:0000189"},{"relation_name":"is_a","term_name":"abnormal ribonucleoprotein complex assembly","termid":"FYPO:0003628"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000294","FYPO:0001985"],"is_obsolete":false,"name":"abolished U2-type prespliceosome assembly","synonyms":[{"name":"U2-type prespliceosome assembly abolished","type":"exact"},{"name":"abolished U2-type prespliceosome assembly during mitotic cell cycle","type":"related"},{"name":"abolished U2-type prespliceosome assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0003630"}


id: PBO:0034511
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cortical_microtubule_cytoskeleton_during_mitotic_interphase","termid":"PBO:0034511"}


id: PBO:0067075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 106, pseudogene","termid":"PBO:0067075"}


id: MONDO:0015187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare inflammatory bowel disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare inflammatory bowel disease (obsolete MONDO:0015187)","secondary_identifiers":["Orphanet:104012"],"synonyms":[{"name":"rare inflammatory bowel disease","type":"exact"}],"termid":"MONDO:0015187","xrefs":{"Monarch":{"xref_id":"0015187"}}}


id: MONDO:1011537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypertriglyceridemia that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertriglyceridemia, non-human animal","termid":"MONDO:1011417"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertriglyceridemia, dog","secondary_identifiers":["OMIA:000514-9615"],"termid":"MONDO:1011537","xrefs":{"Monarch":{"xref_id":"1011537"}}}


id: MONDO:0858991
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive spastic paraplegia type 86 (obsolete MONDO:0858991)","termid":"MONDO:0858991","xrefs":{"Monarch":{"xref_id":"0858991"}}}


id: GO:0046382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving GDP-D-rhamnose, a substance composed of rhamnose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"GDP-D-rhamnose metabolic process","synonyms":[{"name":"GDP-D-rhamnose metabolism","type":"exact"}],"termid":"GO:0046382"}


id: GO:1905678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of adaptive immune effector response.","definition_xrefs":["ISBN:9781405196833","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of adaptive immune response","termid":"GO:0002820"},{"relation_name":"is_a","term_name":"regulation of adaptive immune effector response","termid":"GO:1905677"},{"relation_name":"negatively_regulates","term_name":"adaptive immune effector response","termid":"GO:0090718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of adaptive immune effector response","synonyms":[{"name":"down regulation of adaptive immune effector response","type":"exact"},{"name":"down-regulation of adaptive immune effector response","type":"exact"},{"name":"downregulation of adaptive immune effector response","type":"exact"},{"name":"inhibition of adaptive immune effector response","type":"narrow"}],"termid":"GO:1905678"}


id: PBO:0108892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 5","termid":"PBO:0108892"}


id: PBO:0072100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 31","termid":"PBO:0072100"}


id: PBO:0001826
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.1.3.1","termid":"PBO:0001826"}


id: GO:0070308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a lens fiber cell. A lens fiber cell is any of the elongated, tightly packed cells that make up the bulk of the mature lens in a camera-type eye.","definition_xrefs":["GOC:mah","PMID:7693735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"lens fiber cell differentiation","termid":"GO:0070306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens fiber cell fate commitment","synonyms":[{"name":"lens fibre cell fate commitment","type":"exact"}],"termid":"GO:0070308"}


id: PBO:0066100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras related dexamethasone induced 1","termid":"PBO:0066100"}


id: GO:1900521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to amylopectin.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to amylopectin","termid":"GO:0044591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to amylopectin","termid":"GO:1900521"}


id: GO:0000936
data:
  {"annotated_genes":["SJAG_00667","SJAG_05285"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99641,115313],"is_not":false,"summary":null,"term":"GO:0000936"}]},"cv_name":"cellular_component","definition":"A cell septum that forms following nuclear division.","definition_xrefs":["ISBN:0471940526","GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"division septum","termid":"GO:0000935"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000935"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0000935"],"is_obsolete":false,"name":"primary cell septum","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"primary septum","type":"broad"}],"termid":"GO:0000936","terms_by_termid":{"GO:0000936":null}}


id: MONDO:0968989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare form of limited dorsal myeloschisis (LDM), characterized by a non saccular cutaneous stigmata (midline skin abnormality classically dimple, pit or sometimes angioma), the stalk is attached to this cutaneous stigmata. Fibroneural stalk varies in thickness and complexity.","definition_xrefs":["Orphanet:645343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"limited dorsal myeloschisis","termid":"MONDO:0958345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"non-saccular limited dorsal myeloschisis","secondary_identifiers":["MEDGEN:1853129","UMLS:C5816717"],"termid":"MONDO:0968989","xrefs":{"Monarch":{"xref_id":"0968989"}}}


id: MONDO:0024919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diseases of the domestic dog (Canis familiaris). This term does not include diseases of wild dogs, wolves; foxes; and other Canidae for which the heading carnivora is used.","definition_xrefs":["MESH:D004283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dog disease","synonyms":[{"name":"canine disease","type":"related"},{"name":"canine diseases","type":"related"},{"name":"disease, Dog","type":"related"},{"name":"disease, canine","type":"related"},{"name":"diseases, Dog","type":"related"},{"name":"diseases, canine","type":"related"},{"name":"dog disease","type":"exact"}],"termid":"MONDO:0024919","xrefs":{"Monarch":{"xref_id":"0024919"}}}


id: PBO:0111520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated RAB2 interactor family member 3","termid":"PBO:0111520"}


id: FYPO:0006233
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the vacuolar membrane is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to vacuolar membrane","termid":"FYPO:0004249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to vacuolar membrane","synonyms":[{"name":"decreased protein localisation to vacuolar membrane","type":"exact"},{"name":"decreased protein localization in vacuolar membrane","type":"exact"},{"name":"decreased protein localization to vacuolar membrane during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to vacuolar membrane during vegetative growth","type":"exact"},{"name":"decreased protein localization to vacuole membrane","type":"exact"},{"name":"reduced protein localization to vacuolar membrane","type":"exact"}],"termid":"FYPO:0006233"}


id: SO:0001187
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A snoRNA that specifies the site of pseudouridylation in an RNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["PMID:12457565","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H_ACA_box_snoRNA","termid":"SO:0000594"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridylation_guide_snoRNA","synonyms":[{"name":"pseudouridylation guide snoRNA","type":"exact"}],"termid":"SO:0001187"}


id: PBO:0003628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein Prp5","termid":"PBO:0003628"}


id: PBO:0045655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox B","termid":"PBO:0045655"}


id: MOD:00336
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts three L-cysteine residues, an L-aspartic acid residue and a two-iron two-sulfur cluster to tris-L-cysteinyl L-aspartato diiron disulfide.","definition_xrefs":["PubMed:10968624","RESID:AA0331","PubMed:1312028","PubMed:7947772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-aspartic acid residue","termid":"MOD:02066"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"tris-L-cysteinyl L-aspartato diiron disulfide","synonyms":[{"name":"METAL Iron-sulfur (2Fe-2S)","type":"exact"},{"name":"di-mu-sulfido(bis-S-cysteinyliron)(S-cysteinyl-O4-aspartatoiron)","type":"exact"},{"name":"tris-L-cysteinyl L-aspartato diiron disulfide","type":"exact"}],"termid":"MOD:00336"}


id: MONDO:1010872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any mucopolysaccharidosis that occurs in cats due to a mutation in the GUSB gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis or mucopolysaccharidosis-like disorder, non-human animal","termid":"MONDO:1012581"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucopolysaccharidosis, GUSB-related, domestic cat","secondary_identifiers":["OMIA:000667-9685"],"synonyms":[{"name":"mucopolysaccharidosis VII, domestic cat","type":"related"}],"termid":"MONDO:1010872","xrefs":{"Monarch":{"xref_id":"1010872"}}}


id: MONDO:0016615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"oligoarticular juvenile idiopathic arthritis","termid":"MONDO:0019433"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligoarticular juvenile idiopathic arthritis with anti-nuclear antibodies","secondary_identifiers":["ICD10CM:M08.4","Orphanet:247839"],"synonyms":[{"name":"oligoarticular JIA with anti-nuclear antibodies","type":"exact"},{"name":"pauciarticular chronic arthritis with anti-nuclear antibodies","type":"exact"}],"termid":"MONDO:0016615","xrefs":{"Monarch":{"xref_id":"0016615"}}}


id: PBO:0089733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set6","termid":"PBO:0089733"}


id: PBO:0083855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Expressed copy (at MATa) of a1; homeobox-domain protein that, along with alpha2, represses transcription of haploid-specific genes in diploid cells; MATa1 pre-mRNA splicing requires Bud13p and Ist3p; a1 sequence is not present in SGD because the sequenced S288C strain is MATalpha, not MATa","termid":"PBO:0083855"}


id: PATO:0000288
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000288 relative litter size (obsolete PATO:0000288)","termid":"PATO:0000288"}


id: PBO:0001572
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.-","termid":"PBO:0001572"}


id: GO:0047507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + deoxynucleoside phosphate = ADP + deoxynucleoside diphosphate.","definition_xrefs":["EC:2.7.4.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"},{"relation_name":"is_a","term_name":"nucleobase-containing compound kinase activity","termid":"GO:0019205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"(deoxy)nucleoside-phosphate kinase activity","secondary_identifiers":["RHEA:11216","MetaCyc:DEOXYNUCLEOSIDE-PHOSPHATE-KINASE-RXN"],"synonyms":[{"name":"ATP:deoxynucleoside-phosphate phosphotransferase activity","type":"related"},{"name":"deoxynucleoside monophosphate kinase activity","type":"related"},{"name":"deoxynucleoside-5'-monophosphate kinase activity","type":"related"},{"name":"deoxyribonucleoside monophosphokinase activity","type":"related"}],"termid":"GO:0047507"}


id: GO:0035622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the intrahepatic bile ducts over time, from their formation to the mature structure. Intrahepatic bile ducts (bile ducts within the liver) collect bile from bile canaliculi in the liver, and connect to the extrahepatic bile ducts (bile ducts outside the liver).","definition_xrefs":["PMID:20614624","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"common bile duct development","termid":"GO:0061009"},{"relation_name":"part_of","term_name":"liver development","termid":"GO:0001889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intrahepatic bile duct development","synonyms":[{"name":"IHBD development","type":"exact"},{"name":"intrahepatic biliary duct development","type":"exact"}],"termid":"GO:0035622"}


id: PBO:0067027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 40, pseudogene","termid":"PBO:0067027"}


id: PR:Q9P6S5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ask1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6S5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit ask1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27.02c","synonyms":[{"name":"Spom972h-ask1","type":"exact"},{"name":"associated with spindles and kinetochores protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotically up-regulated gene 181 protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"outer kinetochore protein ask1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6S5"}


id: PATO:0000416
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000416 count value (obsolete PATO:0000416)","termid":"PATO:0000416"}


id: MONDO:0012212
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal dominant syndrome caused by mutations in the TGFBR1 gene. It is characterized by vascular abnormalities (aortic and arterial aneurysms, aortic dissection, and tortuosity of the arteries), hypertelorism, bifid uvula, and early fusion of the skull bones.","definition_xrefs":["NCIT:C75119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Loeys-Dietz syndrome","termid":"MONDO:0018954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Loeys-Dietz syndrome 1","secondary_identifiers":["MEDGEN:1646567","DOID:0070235","Orphanet:97295","UMLS:C4551955","GARD:9458","OMIM:609192"],"synonyms":[{"name":"Furlong syndrome","type":"exact"},{"name":"LDS1","type":"related"},{"name":"Loeys-Dietz aortic aneurysm syndrome","type":"related"},{"name":"Loeys-Dietz syndrome 1","type":"exact"},{"name":"Loeys-Dietz syndrome caused by mutation in TGFBR1","type":"exact"},{"name":"Loeys-Dietz syndrome type 1","type":"exact"},{"name":"TGFBR1 Loeys-Dietz syndrome","type":"exact"},{"name":"aortic aneurysm, familial thoracic 5","type":"related"}],"termid":"MONDO:0012212","xrefs":{"Monarch":{"xref_id":"0012212"}}}


id: PBO:0038781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACVR2B antisense RNA 1","termid":"PBO:0038781"}


id: PBO:0049756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HCCS divergent transcript","termid":"PBO:0049756"}


id: MONDO:0014285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital dyserythropoietic anemia type 1","termid":"MONDO:0020337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"congenital dyserythropoietic anemia type type 1B","secondary_identifiers":["DOID:0111397","OMIM:615631","GARD:15994","UMLS:C3810185","MEDGEN:816515"],"synonyms":[{"name":"CDA, type IB","type":"related"},{"name":"CDAN1B","type":"related"},{"name":"anemia, congenital dyserythropoietic, type IB","type":"exact"},{"name":"congenital dyserythropoietic anemia type type 1B","type":"exact"},{"name":"dyserythropoietic anemia, congenital, type IB","type":"exact"}],"termid":"MONDO:0014285","xrefs":{"Monarch":{"xref_id":"0014285"}}}


id: MONDO:0019201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thyrotoxic periodic paralysis (TPP) is a rare neurological disease characterized by recurrent episodes of paralysis and hypokalemia during a thyrotoxic state.","definition_xrefs":["Orphanet:79102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial periodic paralysis","termid":"MONDO:0000995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"thyrotoxic periodic paralysis","secondary_identifiers":["UMLS:C0268446","GARD:10814","icd11.foundation:1457837313","MedDRA:10043788","MEDGEN:120639","OMIMPS:188580","SCTID:30967002"],"synonyms":[{"name":"thyrotoxic hypokalemic periodic paralysis","type":"exact"}],"termid":"MONDO:0019201","xrefs":{"Monarch":{"xref_id":"0019201"}}}


id: PBO:0082973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic RNA-binding protein; shuttles between nucleus and cytoplasm and is exported from the nucleus in an mRNA export-dependent manner; associates with translating ribosomes; involved in heme regulation of Hap1p as a component of the HMC complex, also involved in the organization of actin filaments; contains a La motif; SRO9 has a paralog, SLF1, that arose from the whole genome duplication","termid":"PBO:0082973"}


id: PBO:0089637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mug129-like protein Mug129a","termid":"PBO:0089637"}


id: MONDO:0016029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant neoplasm of the sinonasal cavity, arising from the basal layers of olfactory neuroepithelial cells in the superior nasal vault, which usually occurs in the 5th to 6th decades of life and is characterized clinically by non-specific symptoms such as progressive ipsilateral nasal block, sinusitis, facial pain, intermittent headaches, hyposmia/dysosmia, rhinorrhea and epistaxis as well as proptosis, diplopia and excessive lacrimation due to orbital extension. With early treatment and in the absence of distant metastases, ENB appears to have a good prognosis (compared to other superior nasal malignancies), despite a high rate of cervical metastases.","definition_xrefs":["Orphanet:1957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system Ewing sarcoma/peripheral primitive neuroectodermal tumor","termid":"MONDO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"esthesioneuroblastoma","secondary_identifiers":["GARD:2197","SCTID:422886007","MEDGEN:60217","UMLS:C0206717"],"synonyms":[{"name":"olfactory neuroblastoma","type":"related"}],"termid":"MONDO:0016029","xrefs":{"Monarch":{"xref_id":"0016029"}}}


id: PBO:0057333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 520h","termid":"PBO:0057333"}


id: PBO:0084643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microtubule-associated protein involved in microtubule organization; involved in assembly and stabilization of microtubules; overproduction results in cell cycle arrest at G2 phase; similar to Drosophila protein MAP and to mammalian MAP4 proteins","termid":"PBO:0084643"}


id: GO:0072030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a short nephron over time, from its formation to the mature structure. Short nephrons are associated with mid-cortical and superficial glomeruli, are situated entirely in the outer medulla, and have no thin ascending limb.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron development","termid":"GO:0072006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"short nephron development","termid":"GO:0072030"}


id: PBO:0080608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 45","termid":"PBO:0080608"}


id: GO:0140931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neutral L-amino acid(out) + Na+(out) + Cl-(out) = neutral L-amino acid(in) + Na+(in)+ Cl-(in).","definition_xrefs":["PMID:19478081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:sodium symporter activity","termid":"GO:0005283"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"sodium:chloride symporter activity","termid":"GO:0015378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"neutral L-amino acid:sodium:chloride symporter activity","synonyms":[{"name":"neutral amino acid:sodium:chloride symporter activity","type":"exact"}],"termid":"GO:0140931"}


id: PBO:0076299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spectrin repeat containing nuclear envelope family member 3","termid":"PBO:0076299"}


id: MONDO:0060707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ververi-Brady syndrome","secondary_identifiers":["UMLS:C4693824","MEDGEN:1647785","Orphanet:580940","GARD:18015","OMIM:617982"],"synonyms":[{"name":"VERBRAS","type":"related"},{"name":"Ververi-Brady syndrome","type":"exact"}],"termid":"MONDO:0060707","xrefs":{"Monarch":{"xref_id":"0060707"}}}


id: PBO:0055788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysyl oxidase","termid":"PBO:0055788"}


id: GO:0010830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of myotube differentiation. Myotube differentiation is the process in which a relatively unspecialized cell acquires specialized features of a myotube cell. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of striated muscle cell differentiation","termid":"GO:0051153"},{"relation_name":"regulates","term_name":"myotube differentiation","termid":"GO:0014902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myotube differentiation","termid":"GO:0010830"}


id: PBO:0001082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structure-specific endonuclease catalytic subunit","termid":"PBO:0001082"}


id: PBO:0082649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of several different pre-ribosomal particles; forms a complex with Ytm1p and Erb1p that is required for maturation of the large ribosomal subunit; required for exit from G<sub>0</sub> and the initiation of cell proliferation","termid":"PBO:0082649"}


id: PBO:0049385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF3C6 pseudogene 1","termid":"PBO:0049385"}


id: MONDO:0011582
data:
  {"annotated_genes":["SJAG_03222"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84633],"is_not":false,"summary":null,"term":"MONDO:0011582"}]},"cv_name":"mondo","definition":"Any fatal multiple mitochondrial dysfunctions syndrome in which the cause of the disease is a mutation in the NFU1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatal multiple mitochondrial dysfunctions syndrome","termid":"MONDO:0017338"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03222":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"multiple mitochondrial dysfunctions syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:605711","GARD:17661","Orphanet:401869","MEDGEN:478062","DOID:0080133","UMLS:C3276432"],"synonyms":[{"name":"MMDS1","type":"related"},{"name":"Mmds","type":"broad"},{"name":"NFU1 deficiency","type":"exact"},{"name":"NFU1 fatal multiple mitochondrial dysfunctions syndrome","type":"exact"},{"name":"fatal multiple mitochondrial dysfunctions syndrome caused by mutation in NFU1","type":"exact"},{"name":"multiple mitochondrial dysfunctions syndrome 1","type":"exact"},{"name":"multiple mitochondrial dysfunctions syndrome type 1","type":"exact"}],"termid":"MONDO:0011582","terms_by_termid":{"MONDO:0011582":null},"xrefs":{"Monarch":{"xref_id":"0011582"}}}


id: PBO:0114662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER oxidoreductase Pbr1, implicated in lipid metabolism, or protein glycosylation","termid":"PBO:0114662"}


id: MONDO:0006911
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete placental site trophoblastic tumor (obsolete MONDO:0006911)","termid":"MONDO:0006911","xrefs":{"Monarch":{"xref_id":"0006911"}}}


id: PR:Q9Y800
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug97 gene.","definition_xrefs":["UniProtKB:Q9Y800","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 97 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC146.11c","synonyms":[{"name":"Spom972h-mug97","type":"exact"},{"name":"meiotic expression up-regulated protein 33 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y800"}


id: PBO:0086722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; non-essential gene identified in a screen for mutants with increased levels of rDNA transcription; weak similarity with uridine kinases and with phosphoribokinases","termid":"PBO:0086722"}


id: PBO:0004873
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates spo12","termid":"PBO:0004873"}


id: GO:0006816
data:
  {"annotated_genes":["SJAG_01090","SJAG_04096","SJAG_02019","SJAG_04668","SJAG_04698","SJAG_03850","SJAG_02532","SJAG_02440","SJAG_00296","SJAG_02877","SJAG_01400","SJAG_02322","SJAG_04757","SJAG_05229","SJAG_03631","SJAG_03873","SJAG_04551","SJAG_04028","SJAG_03399","SJAG_04471"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96845,95118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036444"},{"annotations":[91883,91832,99129,113933],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098703"},{"annotations":[115059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140146"},{"annotations":[95167,94939,101127,90180,108860,65425,108152,97827,113415,116879,94303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070588"},{"annotations":[90683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061856"},{"annotations":[90182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032472"},{"annotations":[90701,112854],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905949"},{"annotations":[101647],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905665"},{"annotations":[108155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"The directed movement of calcium (Ca) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transport","termid":"GO:0030001"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_01090":null,"SJAG_01400":null,"SJAG_02019":null,"SJAG_02322":null,"SJAG_02440":null,"SJAG_02532":null,"SJAG_02877":null,"SJAG_03399":null,"SJAG_03631":null,"SJAG_03850":null,"SJAG_03873":null,"SJAG_04028":null,"SJAG_04096":null,"SJAG_04471":null,"SJAG_04551":null,"SJAG_04668":null,"SJAG_04698":null,"SJAG_04757":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"calcium ion transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"calcium transport","type":"exact"},{"name":"mitochondrial sodium/calcium ion exchange","type":"narrow"},{"name":"sodium:calcium exchange","type":"narrow"}],"termid":"GO:0006816","terms_by_termid":{"GO:0032472":null,"GO:0036444":null,"GO:0061454":null,"GO:0061856":null,"GO:0070588":null,"GO:0098703":null,"GO:0140146":null,"GO:1905665":null,"GO:1905949":null}}


id: MONDO:0017435
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, autosomal dominant inherited syndrome caused by mutations in the IRF6 gene. It is characterized by the presence of cleft palate, cleft lip, pits in the lower lip, web behind the knee (popliteal pterygium), syndactyly, cryptorchidism, scrotal malformation, and hypoplasia of the labia majora.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"arthrogryposis syndrome","termid":"MONDO:0015225"},{"relation_name":"is_a","term_name":"IRF6-related condition","termid":"MONDO:1040010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"popliteal pterygium syndrome","secondary_identifiers":["NCIT:C118786","GARD:21189","MESH:C562509","UMLS:C0265259","icd11.foundation:543218573","ICD9:756.89","SCTID:66783006","MEDGEN:78543","Orphanet:294963","DOID:0060055"],"synonyms":[{"name":"PPS","type":"exact"},{"name":"facio-genito-popliteal syndrome","type":"exact"}],"termid":"MONDO:0017435","xrefs":{"Monarch":{"xref_id":"0017435"}}}


id: PBO:0042983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain helicase DNA binding protein 9","termid":"PBO:0042983"}


id: PBO:0043496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNTN4 antisense RNA 1","termid":"PBO:0043496"}


id: PBO:0077175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"talin 2","termid":"PBO:0077175"}


id: PBO:0058258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4636","termid":"PBO:0058258"}


id: GO:0036492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a phosphate group on to the translation initiation factor eIF2alpha, as a result of endoplasmic reticulum stress.","definition_xrefs":["GOC:PARL","PMID:14676213","GOC:bf","PMID:16835242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational initiation by eIF2 alpha phosphorylation","termid":"GO:0010998"},{"relation_name":"is_a","term_name":"regulation of translation initiation in response to endoplasmic reticulum stress","termid":"GO:0036491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"eiF2alpha phosphorylation in response to endoplasmic reticulum stress","synonyms":[{"name":"eiF2alpha phosphorylation in response to ER stress","type":"exact"},{"name":"regulation of translation initiation by eiF2alpha phosphorylation in response to endoplasmic reticulum stress","type":"exact"}],"termid":"GO:0036492"}


id: MONDO:0009987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinitis pigmentosa that is characterized autosomal recessive inheritance of pigmentary retinal degeneration with onset in the infancy but slower rates of progression than other forms of retinopathy.","definition_xrefs":["PMID:3189470","DOID:0110422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"autosomal recessive pericentral pigmentary retinopathy","secondary_identifiers":["MEDGEN:340314","UMLS:C1849398","GARD:15231","ICD10CM:H35.5","MESH:C564838","OMIM:268060"],"synonyms":[{"name":"retinitis pigmentosa, pericentral","type":"related"},{"name":"retinopathy, pericentral pigmentary, autosomal recessive","type":"related"}],"termid":"MONDO:0009987","xrefs":{"Monarch":{"xref_id":"0009987"}}}


id: MONDO:1010034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft lip with or without cleft palate that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis, non-human animal","termid":"MONDO:1011310"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft lip with or without cleft palate, non-human animal","secondary_identifiers":["OMIA:001140"],"termid":"MONDO:1010034","xrefs":{"Monarch":{"xref_id":"1010034"}}}


id: PR:Q9US25
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hrp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain helicase hrp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1783.05","synonyms":[{"name":"ATP-dependent helicase hrp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-hrp1","type":"exact"}],"termid":"PR:Q9US25"}


id: GO:0062141
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-containing complex that functions with the RNA exosome and contributes to the degradation of abberant transcripts.","definition_xrefs":["PMID:29844170","PMID:21855801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nuclear exosome targeting complex","synonyms":[{"name":"NEXT complex","type":"exact"}],"termid":"GO:0062141"}


id: MOD:00725
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a carbohydrate-like group linked through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"complex glycosylation","termid":"MOD:00725"}


id: MONDO:0005907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Unexplained symptoms reported by veterans of the Persian Gulf War with Iraq in 1991. The symptoms reported include fatigue, skin rash, muscle and joint pain, headaches, loss of memory, shortness of breath, gastrointestinal and respiratory symptoms, and extreme sensitivity to commonly occurring chemicals. (Nature 1994 May 5;369(6475):8)","definition_xrefs":["MESH:D018923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persian gulf syndrome","secondary_identifiers":["UMLS:C0282550","ICD9:300.89","MEDGEN:84396","EFO:0007430","SCTID:95877004","DOID:4491"],"synonyms":[{"name":"Gulf war syndrome","type":"exact"}],"termid":"MONDO:0005907","xrefs":{"Monarch":{"xref_id":"0005907"}}}


id: PBO:0043516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin associated protein family member 5","termid":"PBO:0043516"}


id: PBO:0004799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Cki1","termid":"PBO:0004799"}


id: MONDO:0000037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete herpes simplex encephalitis, susceptibility (obsolete MONDO:0000037)","termid":"MONDO:0000037","xrefs":{"Monarch":{"xref_id":"0000037"}}}


id: PR:O94626
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An oligoribonuclease, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11046:SF0","OMA:SCHPO03979","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligoribonuclease (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.07","secondary_identifiers":["UniProtKB:O94626"],"synonyms":[{"name":"Spom972h-REXO2","type":"exact"}],"termid":"PR:O94626"}


id: GO:0004681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete casein kinase I activity (obsolete GO:0004681)","synonyms":[{"name":"casein kinase I activity","type":"exact"}],"termid":"GO:0004681"}


id: PBO:0001901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Huntingtin-interacting protein homolog","termid":"PBO:0001901"}


id: GO:0048662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of smooth muscle cell proliferation.","definition_xrefs":["GOC:ebc","CL:0000192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of smooth muscle cell proliferation","termid":"GO:0048660"},{"relation_name":"negatively_regulates","term_name":"smooth muscle cell proliferation","termid":"GO:0048659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of smooth muscle cell proliferation","synonyms":[{"name":"down regulation of smooth muscle cell proliferation","type":"exact"},{"name":"down-regulation of smooth muscle cell proliferation","type":"exact"},{"name":"downregulation of smooth muscle cell proliferation","type":"exact"},{"name":"inhibition of smooth muscle cell proliferation","type":"narrow"},{"name":"negative regulation of SMC proliferation","type":"exact"}],"termid":"GO:0048662"}


id: PBO:0058775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7109","termid":"PBO:0058775"}


id: GO:0051582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of a neurotransmitter into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter uptake","termid":"GO:0051580"},{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter transport","termid":"GO:0051590"},{"relation_name":"positively_regulates","term_name":"neurotransmitter uptake","termid":"GO:0001504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of neurotransmitter uptake","synonyms":[{"name":"activation of neurotransmitter uptake","type":"narrow"},{"name":"positive regulation of neurotransmitter import","type":"exact"},{"name":"stimulation of neurotransmitter uptake","type":"narrow"},{"name":"up regulation of neurotransmitter uptake","type":"exact"},{"name":"up-regulation of neurotransmitter uptake","type":"exact"},{"name":"upregulation of neurotransmitter uptake","type":"exact"}],"termid":"GO:0051582"}


id: PBO:0060555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurobeachin like 1","termid":"PBO:0060555"}


id: PBO:0027770
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_recombination_frequency","termid":"PBO:0027770"}


id: PBO:0001698
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.3.8","termid":"PBO:0001698"}


id: GO:0072153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a renal fibroblast.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"kidney interstitial fibroblast differentiation","termid":"GO:0072071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal interstitial fibroblast fate commitment","synonyms":[{"name":"kidney interstitial cell fate commitment","type":"exact"}],"termid":"GO:0072153"}


id: PBO:0090666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial GIDA family tRNA uridine 5-carboxymethylaminomethyl modification enzyme Ips1","termid":"PBO:0090666"}


id: PBO:0045872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 beta 2 pseudogene 5","termid":"PBO:0045872"}


id: SO:0001027
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A genotype is a variant genome, complete or incomplete.","definition_xrefs":["SO:immuno_workshop"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variant_collection","termid":"SO:0001507"},{"relation_name":"variant_of","term_name":"genome","termid":"SO:0001026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genotype","secondary_identifiers":["http://en.wikipedia.org/wiki/Genotype"],"termid":"SO:0001027"}


id: GO:0019336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenol-containing compound catabolic process","secondary_identifiers":["MetaCyc:PHENOLDEG-PWY"],"synonyms":[{"name":"phenol-containing compound breakdown","type":"exact"},{"name":"phenol-containing compound catabolism","type":"exact"},{"name":"phenol-containing compound degradation","type":"exact"}],"termid":"GO:0019336"}


id: PBO:0051184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-75 (pseudogene)","termid":"PBO:0051184"}


id: PBO:0030175
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-slow_cell_population_growth_during_recovery_from_stationary_phase","termid":"PBO:0030175"}


id: PBO:0004136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Prp1","termid":"PBO:0004136"}


id: MONDO:0019910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Maternal uniparental disomy of chromosome 2 is an uniparental disomy of maternal origin that most likely does not have any phenotypic expression except from cases of homozygosity for a recessive disease mutation for which only mother is a carrier.","definition_xrefs":["Orphanet:96179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 2 disorder","termid":"MONDO:0700009"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternal uniparental disomy of chromosome 2","secondary_identifiers":["MEDGEN:1631626","UMLS:C4707718","GARD:19331","icd11.foundation:2067230711","SCTID:766237006"],"synonyms":[{"name":"UPD(2)mat","type":"exact"},{"name":"maternal uniparental disomy of chromosome type 2","type":"exact"}],"termid":"MONDO:0019910","xrefs":{"Monarch":{"xref_id":"0019910"}}}


id: PBO:0039016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"afamin","termid":"PBO:0039016"}


