# terms

id: PBO:0043020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHM like Rab escort protein","termid":"PBO:0043020"}


id: GO:0052626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoate + L-glutamate + ATP = N-benzoyl-L-glutamate + AMP + diphosphate + H+.","definition_xrefs":["PMID:19189963","MetaCyc:RXN-10886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"N-benzoyl-L-glutamate synthetase activity","synonyms":[{"name":"benzoate amino acid synthetase activity","type":"broad"},{"name":"benzoyl amino acid synthetase activity","type":"exact"}],"termid":"GO:0052626"}


id: MONDO:0060629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with or without hyperkinetic movements and seizures, autosomal recessive","secondary_identifiers":["OMIM:617820","EFO:0009300","UMLS:C4693325","MEDGEN:1646665"],"synonyms":[{"name":"NDHMSR","type":"related"},{"name":"neurodevelopmental disorder with or without hyperkinetic movements and seizures, autosomal recessive","type":"exact"}],"termid":"MONDO:0060629","xrefs":{"Monarch":{"xref_id":"0060629"}}}


id: PBO:0078883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily V member 6","termid":"PBO:0078883"}


id: PBO:0051444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-30 (pseudogene)","termid":"PBO:0051444"}


id: MONDO:0003000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A unique group of rare tumors of the central nervous system that affect mainly children and adolescents. Their morphologic and biologic profile corresponds to that of homologous germ cell tumors that arise in the gonads and in other extragonadal sites. Representative examples include: germinoma, embryonal carcinoma, yolk sac tumor, choriocarcinoma, and teratoma.","definition_xrefs":["NCIT:C5461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system neoplasm","termid":"MONDO:0006130"},{"relation_name":"is_a","term_name":"extragonadal germ cell tumor","termid":"MONDO:0018201"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system germ cell tumor","secondary_identifiers":["UMLS:C1332880","DOID:4439","MEDGEN:232040"],"synonyms":[{"name":"CNS germ cell neoplasm","type":"exact"},{"name":"CNS germ cell tumor","type":"exact"},{"name":"CNS germ cell tumour","type":"exact"},{"name":"central nervous system germ cell neoplasm","type":"exact"},{"name":"central nervous system germ cell tumor","type":"exact"},{"name":"central nervous system rare germ cell tumor","type":"exact"},{"name":"central nervous system rare germ cell tumour","type":"exact"},{"name":"germ cell neoplasm of CNS","type":"exact"},{"name":"germ cell neoplasm of central nervous system","type":"exact"},{"name":"germ cell neoplasm of the CNS","type":"exact"},{"name":"germ cell neoplasm of the central nervous system","type":"exact"},{"name":"germ cell tumor of CNS","type":"exact"},{"name":"germ cell tumor of central nervous system","type":"exact"},{"name":"germ cell tumor of the CNS","type":"exact"},{"name":"germ cell tumor of the central nervous system","type":"exact"},{"name":"germ cell tumour of CNS","type":"exact"},{"name":"germ cell tumour of central nervous system","type":"exact"},{"name":"germ cell tumour of the CNS","type":"exact"},{"name":"germ cell tumour of the central nervous system","type":"exact"}],"termid":"MONDO:0003000","xrefs":{"Monarch":{"xref_id":"0003000"}}}


id: GO:0060832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the animal/vegetal axis in the oocyte. The animal/vegetal axis of an oocyte is defined by the placement of the nucleus in the oocyte and can sometimes be identified by the asymmetric placement of other substances such as yolk in the oocyte. The pole of the egg that is closest to the nucleus defines the animal end, with the axis passing through the nucleus.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oocyte axis specification","termid":"GO:0007309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte animal/vegetal axis specification","termid":"GO:0060832"}


id: MONDO:1011921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder, non-human animal","termid":"MONDO:1011354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyometra, non-human animal","secondary_identifiers":["OMIA:002391"],"termid":"MONDO:1011921","xrefs":{"Monarch":{"xref_id":"1011921"}}}


id: GO:1990091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sodium-dependent hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their own peptide bonds.","definition_xrefs":["PMID:20460380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"self proteolysis","termid":"GO:0097264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sodium-dependent self proteolysis","termid":"GO:1990091"}


id: PBO:0050111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 21","termid":"PBO:0050111"}


id: FYPO:0005130
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which spores germinate to a lower extent than wild type following exposure to heat.","definition_xrefs":["PMID:24623719","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"spores sensitive to heat","termid":"FYPO:0005130"}


id: PBO:0090168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP2C catalytic subunit Ptc2","termid":"PBO:0090168"}


id: GO:0033541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A fatty acid beta-oxidation pathway by which fatty acids having cis-double bonds on odd-numbered carbons are degraded. In this pathway, a cis-3-enoyl-CoA is generated by the core beta-oxidation pathway, and then converted to a trans-2-enoyl-CoA, which can return to the core beta-oxidation pathway for complete degradation. Fatty acid beta-oxidation begins with the addition of coenzyme A to a fatty acid, and ends when only two or three carbons remain (as acetyl-CoA or propionyl-CoA respectively).","definition_xrefs":["MetaCyc:PWY-5137","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid beta-oxidation","termid":"GO:0006635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"fatty acid beta-oxidation, unsaturated, odd number","termid":"GO:0033541"}


id: PBO:0048747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine-N-acyltransferase like 1B","termid":"PBO:0048747"}


id: PBO:0046023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2A pseudogene 4","termid":"PBO:0046023"}


id: PBO:0053862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1135","termid":"PBO:0053862"}


id: GO:0060005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reflex process in which a response to an angular or linear acceleration stimulus begins with an afferent nerve impulse from a receptor in the inner ear and ends with the compensatory action of eye muscles. Signaling never reaches a level of consciousness.","definition_xrefs":["PMID:11784757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reflex","termid":"GO:0060004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibular reflex","termid":"GO:0060005"}


id: GO:0140417
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion from intracellular stores by a channel that opens when a ATP has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["PMID:22736763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly gated calcium channel activity","termid":"GO:0015278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"intracellularly ATP-gated calcium channel activity","synonyms":[{"name":"ATP-sensitive calcium-release channel activity","type":"related"}],"termid":"GO:0140417"}


id: PBO:0091247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase Gmh1","termid":"PBO:0091247"}


id: GO:1903416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glycoside stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","GOC:BHF","PMID:16243970","GOC:mtg_cardiac_conduct_nov11","GOC:rl","PMID:12027881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to glycoside","synonyms":[{"name":"cellular response to ouabain","type":"related"}],"termid":"GO:1903416"}


id: PBO:0054269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1655","termid":"PBO:0054269"}


id: GO:0071984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dormancy process that results an organism remaining in reproductive diapause. Reproductive diapause is a form of diapause where the organism itself will remain fully active, including feeding and other routine activities, but the reproductive organs experience a tissue-specific reduction in metabolism, with characteristic triggering and releasing stimuli.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of diapause","termid":"GO:0071982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of reproductive diapause","termid":"GO:0071984"}


id: PBO:0044117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutaneous T cell lymphoma-associated antigen 1","termid":"PBO:0044117"}


id: PBO:0047051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM111A divergent transcript","termid":"PBO:0047051"}


id: GO:0061850
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"That part of the growth cone which represents the distal part of the structure.","definition_xrefs":["PMID:10797548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell leading edge","termid":"GO:0031252"},{"relation_name":"part_of","term_name":"peripheral region of growth cone","termid":"GO:0090725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"growth cone leading edge","termid":"GO:0061850"}


id: PBO:0002645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3 h3.1","termid":"PBO:0002645"}


id: MONDO:0019336
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gardner syndrome is a severe form of familial adenomatous polyposis characterized by multiple adenomas in the colon and rectum associated with prominent extracolonic features including osteomas and multiple skin and soft tissue tumors.","definition_xrefs":["Orphanet:79665"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete inherited skin tumor (obsolete MONDO:0015950)","termid":"MONDO:0015950"},{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"excluded_subClassOf","term_name":"obsolete malformation syndrome with hamartosis (obsolete MONDO:0020063)","termid":"MONDO:0020063"},{"relation_name":"excluded_subClassOf","term_name":"obsolete palpebral sebaceous gland tumor (obsolete MONDO:0020176)","termid":"MONDO:0020176"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"classic familial adenomatous polyposis","termid":"MONDO:0021055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Gardner syndrome","secondary_identifiers":["icd11.foundation:1428130769","ICD9:759.89","SCTID:60876000","MEDGEN:6547","MESH:D005736","NCIT:C6728","UMLS:C0017097","MedDRA:10017727","GARD:6482"],"synonyms":[{"name":"Gardner syndrome","type":"exact"},{"name":"Gardner's syndrome","type":"exact"},{"name":"intestinal polyposis, osteomas, sebaceous cysts","type":"related"},{"name":"polyposis coli and multiple hard and soft tissue tumors","type":"related"},{"name":"polyposis coli and multiple hard and soft tissue tumours","type":"related"}],"termid":"MONDO:0019336","xrefs":{"Monarch":{"xref_id":"0019336"}}}


id: GO:0042274
data:
  {"annotated_genes":["SJAG_03262","SJAG_02553","SJAG_01420","SJAG_03905","SJAG_01201","SJAG_03569","SJAG_03077","SJAG_04033","SJAG_04900","SJAG_02644","SJAG_04424","SJAG_04746","SJAG_04339","SJAG_03424","SJAG_02184","SJAG_02250","SJAG_02025","SJAG_02046","SJAG_04582","SJAG_04908","SJAG_04979","SJAG_00889","SJAG_03954","SJAG_01115","SJAG_00772","SJAG_02547","SJAG_03252","SJAG_02372","SJAG_03425","SJAG_02681","SJAG_03156","SJAG_03410","SJAG_01250","SJAG_01323","SJAG_02020","SJAG_00294","SJAG_01296","SJAG_02340","SJAG_03617","SJAG_00544","SJAG_03234","SJAG_04890","SJAG_03028","SJAG_01604","SJAG_04524","SJAG_05187","SJAG_03422","SJAG_00986","SJAG_06613","SJAG_02821","SJAG_01618","SJAG_03796","SJAG_01877","SJAG_04562","SJAG_02911","SJAG_00513","SJAG_04916","SJAG_04029","SJAG_01347","SJAG_02300","SJAG_02094","SJAG_04472","SJAG_01623","SJAG_00572","SJAG_01548","SJAG_02479","SJAG_00955","SJAG_02749","SJAG_01169","SJAG_00945","SJAG_03846","SJAG_00344","SJAG_00562","SJAG_04224","SJAG_05018","SJAG_04069","SJAG_01764","SJAG_02358","SJAG_03798","SJAG_04342","SJAG_01338","SJAG_02803","SJAG_03583","SJAG_01272","SJAG_02702","SJAG_00879","SJAG_03654","SJAG_00897","SJAG_02608","SJAG_04687","SJAG_02335","SJAG_04174","SJAG_02499","SJAG_03341","SJAG_03755","SJAG_02662","SJAG_02477","SJAG_04998","SJAG_03539","SJAG_00523","SJAG_01907","SJAG_01551","SJAG_00965","SJAG_02475","SJAG_03952","SJAG_03857","SJAG_01609"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90853,91000,91173,91358,93967,94045,94046,96562,99975,101230,101231,101232,102409,102582,103312,105057,106519,107404,107405,109034,111108,111109,111110,112294,116890,118205],"is_not":false,"summary":null,"term":"GO:0042274"},{"annotations":[114692,99317,107108],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000480"},{"annotations":[94194,114804,108491,105151,105055,104052,104269,105152,102626,107438,92895,95984,107109,112983,99318,114892,98992,96278,118089],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000447"},{"annotations":[105056],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000461"},{"annotations":[99319,108492,114693,107110],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000472"},{"annotations":[95312,100090,91762,95706,101424,93181,94243,95211,96343,109468,91529,101179,110059,113036,115930,106856,111488,109589,104080,88509,88166,90799,92769,97359,98020,98291,99961],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030490"},{"annotations":[100256,105175,88714,87297,101070,111268,105176,116241,97836,92118,96526,98698,99705,108191,95162,93813,109882,95161,105708,87793,106455,114218,98661,97837,106595,98660,90714,115247,108583,100906,109215,105470],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000462"},{"annotations":[110904,115931,105167,105168,96908,96056,106297,94244,96907,101229,110903,103361,74272,106296,89356,101227,101228,111105,111106,111107,99966,111269,111568,118106],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000028"},{"annotations":[92095],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904812"},{"annotations":[107111,112565],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034462"}]},"cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a small ribosomal subunit; includes transport to the sites of protein synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex biogenesis","termid":"GO:0022613"},{"relation_name":"part_of","term_name":"ribosome biogenesis","termid":"GO:0042254"}],"gene_count":107,"genes_by_uniquename":{"SJAG_00294":null,"SJAG_00344":null,"SJAG_00513":null,"SJAG_00523":null,"SJAG_00544":null,"SJAG_00562":null,"SJAG_00572":null,"SJAG_00772":null,"SJAG_00879":null,"SJAG_00889":null,"SJAG_00897":null,"SJAG_00945":null,"SJAG_00955":null,"SJAG_00965":null,"SJAG_00986":null,"SJAG_01115":null,"SJAG_01169":null,"SJAG_01201":null,"SJAG_01250":null,"SJAG_01272":null,"SJAG_01296":null,"SJAG_01323":null,"SJAG_01338":null,"SJAG_01347":null,"SJAG_01420":null,"SJAG_01548":null,"SJAG_01551":null,"SJAG_01604":null,"SJAG_01609":null,"SJAG_01618":null,"SJAG_01623":null,"SJAG_01764":null,"SJAG_01877":null,"SJAG_01907":null,"SJAG_02020":null,"SJAG_02025":null,"SJAG_02046":null,"SJAG_02094":null,"SJAG_02184":null,"SJAG_02250":null,"SJAG_02300":null,"SJAG_02335":null,"SJAG_02340":null,"SJAG_02358":null,"SJAG_02372":null,"SJAG_02475":null,"SJAG_02477":null,"SJAG_02479":null,"SJAG_02499":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_02608":null,"SJAG_02644":null,"SJAG_02662":null,"SJAG_02681":null,"SJAG_02702":null,"SJAG_02749":null,"SJAG_02803":null,"SJAG_02821":null,"SJAG_02911":null,"SJAG_03028":null,"SJAG_03077":null,"SJAG_03156":null,"SJAG_03234":null,"SJAG_03252":null,"SJAG_03262":null,"SJAG_03341":null,"SJAG_03410":null,"SJAG_03422":null,"SJAG_03424":null,"SJAG_03425":null,"SJAG_03539":null,"SJAG_03569":null,"SJAG_03583":null,"SJAG_03617":null,"SJAG_03654":null,"SJAG_03755":null,"SJAG_03796":null,"SJAG_03798":null,"SJAG_03846":null,"SJAG_03857":null,"SJAG_03905":null,"SJAG_03952":null,"SJAG_03954":null,"SJAG_04029":null,"SJAG_04033":null,"SJAG_04069":null,"SJAG_04174":null,"SJAG_04224":null,"SJAG_04339":null,"SJAG_04342":null,"SJAG_04424":null,"SJAG_04472":null,"SJAG_04524":null,"SJAG_04562":null,"SJAG_04582":null,"SJAG_04687":null,"SJAG_04746":null,"SJAG_04890":null,"SJAG_04900":null,"SJAG_04908":null,"SJAG_04916":null,"SJAG_04979":null,"SJAG_04998":null,"SJAG_05018":null,"SJAG_05187":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0042254"],"is_obsolete":false,"name":"ribosomal small subunit biogenesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ribosomal small subunit biogenesis and assembly","type":"exact"}],"termid":"GO:0042274","terms_by_termid":{"GO:0000028":null,"GO:0000447":null,"GO:0000461":null,"GO:0000462":null,"GO:0000472":null,"GO:0000480":null,"GO:0030490":null,"GO:0034462":null,"GO:0042274":null,"GO:1904812":null}}


id: PR:Q09770
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphoacetylglucosamine mutase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoacetylglucosamine mutase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1296.01c","secondary_identifiers":["UniProtKB:Q09770"],"synonyms":[{"name":"N-acetylglucosamine-phosphate mutase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PAGM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PGM3","type":"exact"},{"name":"acetylglucosamine phosphomutase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09770"}


id: GO:0019869
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of a chloride channel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ion channel inhibitor activity","termid":"GO:0008200"},{"relation_name":"is_a","term_name":"chloride channel regulator activity","termid":"GO:0017081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0140678"],"is_obsolete":false,"name":"chloride channel inhibitor activity","termid":"GO:0019869"}


id: MONDO:0009454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any immunodeficiency-centromeric instability-facial anomalies syndrome in which the cause of the disease is a mutation in the DNMT3B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency-centromeric instability-facial anomalies syndrome","termid":"MONDO:0000133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0006025"],"is_obsolete":false,"name":"immunodeficiency-centromeric instability-facial anomalies syndrome 1","secondary_identifiers":["MEDGEN:1636193","UMLS:C4551557","OMIM:242860","NCIT:C156430","GARD:15188","DOID:0090008"],"synonyms":[{"name":"DNMT3B immunodeficiency-centromeric instability-facial anomalies syndrome","type":"exact"},{"name":"ICF syndrome 1","type":"exact"},{"name":"ICF1","type":"related"},{"name":"centromeric instability, immunodeficiency syndrome","type":"related"},{"name":"immune deficiency, variable, with centromeric instability of chromosomes 1, 9, and 16","type":"related"},{"name":"immunodeficiency syndrome, variable","type":"related"},{"name":"immunodeficiency-centromeric instability-Facial anomalies syndrome type 1","type":"exact"},{"name":"immunodeficiency-centromeric instability-facial anomalies syndrome 1","type":"exact"},{"name":"immunodeficiency-centromeric instability-facial anomalies syndrome caused by mutation in DNMT3B","type":"exact"},{"name":"immunodeficiency-centromeric instability-facial anomalies syndrome type 1","type":"exact"}],"termid":"MONDO:0009454","xrefs":{"Monarch":{"xref_id":"0009454"}}}


id: MONDO:0004327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papilloma that arises from the ciliated respiratory mucosa that lines the sphenoid sinus. It is classified as inverted papilloma and oncocytic papilloma.","definition_xrefs":["NCIT:C6838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus Schneiderian papilloma","termid":"MONDO:0006353"},{"relation_name":"is_a","term_name":"benign neoplasm of sphenoidal sinus","termid":"MONDO:0021477"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphenoid sinus Schneiderian papilloma","secondary_identifiers":["DOID:7679","MEDGEN:277659","UMLS:C1336038"],"synonyms":[{"name":"Schneiderian papilloma of sphenoid sinus","type":"related"},{"name":"Schneiderian papilloma of the sphenoid sinus","type":"exact"},{"name":"sphenoid sinus Schneiderian papilloma","type":"exact"}],"termid":"MONDO:0004327","xrefs":{"Monarch":{"xref_id":"0004327"}}}


id: GO:0046012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oskar mRNA translation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translation","termid":"GO:0045727"},{"relation_name":"is_a","term_name":"regulation of oskar mRNA translation","termid":"GO:0046011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of oskar mRNA translation","synonyms":[{"name":"activation of oskar mRNA translation","type":"narrow"},{"name":"stimulation of oskar mRNA translation","type":"narrow"},{"name":"up regulation of oskar mRNA translation","type":"exact"},{"name":"up-regulation of oskar mRNA translation","type":"exact"},{"name":"upregulation of oskar mRNA translation","type":"exact"}],"termid":"GO:0046012"}


id: PBO:0005255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomethylpyrimidine kinase (predicted)","termid":"PBO:0005255"}


id: MONDO:0012261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, 6","secondary_identifiers":["OMIM:609378","MEDGEN:324472","UMLS:C1836271"],"synonyms":[{"name":"AUTS6","type":"exact"},{"name":"autism susceptibility 6","type":"exact"},{"name":"autism, susceptibility to, 6","type":"exact"}],"termid":"MONDO:0012261","xrefs":{"Monarch":{"xref_id":"0012261"}}}


id: PBO:0069049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 295, pseudogene","termid":"PBO:0069049"}


id: PBO:0054601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2005","termid":"PBO:0054601"}


id: PBO:0043578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XI alpha 2 chain","termid":"PBO:0043578"}


id: MONDO:0957993
data:
  {"annotated_genes":["SJAG_04665"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85548],"is_not":false,"summary":null,"term":"MONDO:0957993"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive external ophthalmoplegia with mitochondrial DNA deletions","termid":"MONDO:0000090"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"progressive external ophthalmoplegia with mitochondrial dna deletions, autosomal recessive 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5882731","MEDGEN:1847098","OMIM:620647"],"termid":"MONDO:0957993","terms_by_termid":{"MONDO:0957993":null},"xrefs":{"Monarch":{"xref_id":"0957993"}}}


id: GO:0002122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Aggressive behavior associated with attempts to flee from a threat.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aggressive behavior","termid":"GO:0002118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fear-induced aggressive behavior","synonyms":[{"name":"fear-induced aggression","type":"exact"}],"termid":"GO:0002122"}


id: GO:1903141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of establishment of endothelial barrier.","definition_xrefs":["GOC:als","PMID:24851274","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endothelial cell development","termid":"GO:1901551"},{"relation_name":"is_a","term_name":"regulation of establishment of endothelial barrier","termid":"GO:1903140"},{"relation_name":"negatively_regulates","term_name":"establishment of endothelial barrier","termid":"GO:0061028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment of endothelial barrier","synonyms":[{"name":"down regulation of establishment of endothelial barrier","type":"exact"},{"name":"down-regulation of establishment of endothelial barrier","type":"exact"},{"name":"downregulation of establishment of endothelial barrier","type":"exact"},{"name":"inhibition of establishment of endothelial barrier","type":"narrow"}],"termid":"GO:1903141"}


id: PBO:0084203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Holliday junction resolvase; promotes template switching during break-induced replication (BIR), causing non-reciprocal translocations (NRTs); localization is cell-cycle dependent and regulated by Cdc28p phosphorylation; homolog of human GEN1; similar to S. cerevisiae endonuclease Rth1p","termid":"PBO:0084203"}


id: MONDO:0013327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary hyperoxaluria type 3 (PH3) is a disorder of glyoxylate metabolism that can be asymptomatic or characterized by oxalate nephrolithiasis.","definition_xrefs":["Orphanet:93600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary hyperoxaluria","termid":"MONDO:0002474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"primary hyperoxaluria type 3","secondary_identifiers":["NCIT:C123214","OMIM:613616","GARD:10738","UMLS:C3150878","DOID:0111672","MEDGEN:462228","SCTID:734990008"],"synonyms":[{"name":"HOGA1 primary hyperoxaluria","type":"exact"},{"name":"HP3","type":"related"},{"name":"PH III","type":"related"},{"name":"hyperoxaluria, primary, type 3","type":"related"},{"name":"hyperoxaluria, primary, type III","type":"related"},{"name":"primary hyperoxaluria caused by mutation in HOGA1","type":"exact"},{"name":"primary hyperoxaluria type III","type":"exact"}],"termid":"MONDO:0013327","xrefs":{"Monarch":{"xref_id":"0013327"}}}


id: PBO:0075675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT2 chromatin protein domain containing 1","termid":"PBO:0075675"}


id: PBO:0031331
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_canavanine","termid":"PBO:0031331"}


id: PBO:0071172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 12","termid":"PBO:0071172"}


id: PBO:0116224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein, human TAPT1 ortholog","termid":"PBO:0116224"}


id: PBO:0043143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 11","termid":"PBO:0043143"}


id: GO:0009548
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a plasmodesma.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"},{"relation_name":"part_of","term_name":"plasmodesma","termid":"GO:0009506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"plasmodesmatal plasma membrane","termid":"GO:0009548"}


id: MONDO:0030062
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated arrhythmogenic right ventricular dysplasia","termid":"MONDO:0016342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"arrhythmogenic right ventricular dysplasia, familial, 14","secondary_identifiers":["UMLS:C5394505","MEDGEN:1712001","OMIM:618920","DOID:0080959"],"synonyms":[{"name":"ARRHYTHMOGENIC RIGHT VENTRICULAR DYSPLASIA, FAMILIAL, 14","type":"exact"},{"name":"ARVD14","type":"exact"},{"name":"Arrhythmogenic Right Ventricular Cardiomyopathy 14","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia, familial, 14","type":"exact"}],"termid":"MONDO:0030062","xrefs":{"Monarch":{"xref_id":"0030062"}}}


id: GO:0044014
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H2B L-lysine (position 5) = CoA + histone H2B N6-acetyl-L-lysine (position 5).","definition_xrefs":["PMID:18552846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2B acetyltransferase activity","termid":"GO:0044013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0140096","GO:0003824","GO:0016740","GO:0034212"],"is_obsolete":false,"name":"histone H2BK5 acetyltransferase activity","synonyms":[{"name":"histone acetylase activity (H2B-K5 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H2B-K5 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H2B-K5 specific)","type":"exact"}],"termid":"GO:0044014"}


id: FYPO:0004141
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of glutathione (GSH) measured in a cell that is subject to nitrogen starvation is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell","termid":"FYPO:0000991"},{"relation_name":"is_a","term_name":"altered level of substance in cell during nitrogen starvation","termid":"FYPO:0004139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular glutathione level during nitrogen starvation","synonyms":[{"name":"decreased cellular GSH level during nitrogen starvation","type":"exact"},{"name":"decreased cellular L-gamma-glutamyl-L-cysteinylglycine level during nitrogen starvation","type":"exact"},{"name":"decreased cellular glutathione level during nitrogen depletion","type":"exact"},{"name":"decreased cellular glutathione level during nitrogen deprivation","type":"exact"},{"name":"decreased cellular reduced glutathione level during nitrogen starvation","type":"exact"},{"name":"decreased glutathione accumulation during nitrogen starvation","type":"related"},{"name":"reduced cellular glutathione level during nitrogen starvation","type":"exact"}],"termid":"FYPO:0004141"}


id: GO:1902480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a mitotic spindle.","definition_xrefs":["PMID:23885124","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule cytoskeleton","termid":"GO:0072698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to mitotic spindle","synonyms":[{"name":"protein localisation in mitotic spindle","type":"exact"},{"name":"protein localisation to mitotic spindle","type":"exact"},{"name":"protein localization in mitotic spindle","type":"exact"}],"termid":"GO:1902480"}


id: GO:0060434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the bronchus is generated and organized. The bronchus is the portion of the airway that connects to the lungs.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"},{"relation_name":"part_of","term_name":"bronchus development","termid":"GO:0060433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bronchus morphogenesis","termid":"GO:0060434"}


id: MONDO:0008676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary mucosal leukokeratosis in which the cause of the disease is a mutation in the KRT4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary mucosal leukokeratosis","termid":"MONDO:0015748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"white sponge nevus 1","secondary_identifiers":["OMIM:193900","UMLS:C4011926","MEDGEN:860363","DOID:0081287"],"synonyms":[{"name":"KRT4 hereditary mucosal leukokeratosis","type":"exact"},{"name":"WHITE sponge NEVUS 1","type":"related"},{"name":"WSN1","type":"related"},{"name":"White sponge Nevus of Cannon","type":"related"},{"name":"White sponge Nevus type 1","type":"exact"},{"name":"hereditary mucosal leukokeratosis caused by mutation in KRT4","type":"exact"},{"name":"leukokeratosis, hereditary mucosal","type":"related"},{"name":"white sponge nevus 1","type":"exact"}],"termid":"MONDO:0008676","xrefs":{"Monarch":{"xref_id":"0008676"}}}


id: GO:0008110
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-histidine = 3-(imidazol-5-yl)pyruvate + L-glutamate.","definition_xrefs":["EC:2.6.1.38","RHEA:16565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016769","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-histidine:2-oxoglutarate aminotransferase activity","secondary_identifiers":["MetaCyc:HISTTRANSAM-RXN","KEGG_REACTION:R01161"],"synonyms":[{"name":"histidine aminotransferase activity","type":"broad"},{"name":"histidine transaminase activity","type":"broad"},{"name":"histidine-2-oxoglutarate aminotransferase activity","type":"related"}],"termid":"GO:0008110"}


id: FYPO:0000923
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of isocitrate dehydrogenase (NAD+) activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal isocitrate dehydrogenase (NAD+) activity","termid":"FYPO:0000922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"increased isocitrate dehydrogenase (NAD+) activity","synonyms":[{"name":"increased NAD-IDH activity","type":"exact"}],"termid":"FYPO:0000923"}


id: GO:0003243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic growth in which the left ventricle grows expanding its external boundary.","definition_xrefs":["GOC:mtg_heart","PMID:14709543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth involved in heart morphogenesis","termid":"GO:0003241"},{"relation_name":"part_of","term_name":"cardiac left ventricle morphogenesis","termid":"GO:0003214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circumferential growth involved in left ventricle morphogenesis","termid":"GO:0003243"}


id: GO:0140316
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding directly to sorting signals in the cytosolic tails of transmembrane cargos (or transmembrane cargo receptors serving as recognition interfaces for lumenal cargos), to concentrate them into vesicles or tubules for transport via intracellular vesicular transport or the secretory pathway.","definition_xrefs":["PMID:25795254"],"gene_count":0,"genotype_count":0,"name":"obsolete vesicular transport adaptor activity (obsolete GO:0140316)","termid":"GO:0140316"}


id: PBO:0062381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily D member 4","termid":"PBO:0062381"}


id: PBO:0063174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ binding kinase","termid":"PBO:0063174"}


id: PBO:0085352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipid hydroperoxide glutathione peroxidase; induced by glucose starvation that protects cells from phospholipid hydroperoxides and nonphospholipid peroxides during oxidative stress; glutathione peroxidase activity is neuroprotective in models of Huntington's disease; GPX1 has a paralog, HYR1, that arose from the whole genome duplication","termid":"PBO:0085352"}


id: PBO:0088545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAC3/GANP/THP3 family protein, human LENG8 ortholog","termid":"PBO:0088545"}


id: GO:0010904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of UDP-glucose catabolism. UDP-glucose catabolic processes are the chemical reactions and pathways resulting in the breakdown of UDP-glucose, uridinediphosphoglucose, a substance composed of glucose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"regulation of glucose metabolic process","termid":"GO:0010906"},{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"regulates","term_name":"UDP-alpha-D-glucose catabolic process","termid":"GO:0006258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0055086","GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of UDP-glucose catabolic process","synonyms":[{"name":"regulation of UDP-glucose catabolism","type":"exact"}],"termid":"GO:0010904"}


id: MONDO:0003913
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mixed cell uveal melanoma that involves the optic choroid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant choroid melanoma","termid":"MONDO:0003878"},{"relation_name":"is_a","term_name":"mixed cell uveal melanoma","termid":"MONDO:0003910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"choroid mixed cell melanoma","secondary_identifiers":["DOID:6525","NCIT:C35782","MEDGEN:232361","UMLS:C1333025"],"synonyms":[{"name":"choroid mixed cell melanoma","type":"exact"},{"name":"mixed cell uveal melanoma of optic choroid","type":"exact"},{"name":"optic choroid mixed cell uveal melanoma","type":"exact"}],"termid":"MONDO:0003913","xrefs":{"Monarch":{"xref_id":"0003913"}}}


id: PBO:0061665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 43","termid":"PBO:0061665"}


id: PBO:0077740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transducer of ERBB2, 1","termid":"PBO:0077740"}


id: GO:0072176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a nephric duct over time, from its initial formation to a mature structure. A nephric duct is a tube that drains a primitive kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"kidney epithelium development","termid":"GO:0072073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephric duct development","termid":"GO:0072176"}


id: GO:1900625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of monocyte aggregation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monocyte aggregation","termid":"GO:1900623"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte cell-cell adhesion","termid":"GO:1903039"},{"relation_name":"positively_regulates","term_name":"monocyte aggregation","termid":"GO:0070487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of monocyte aggregation","synonyms":[{"name":"activation of monocyte aggregation","type":"narrow"},{"name":"activation of mononuclear phagocyte aggregation","type":"exact"},{"name":"positive regulation of mononuclear phagocyte aggregation","type":"exact"},{"name":"up regulation of monocyte aggregation","type":"exact"},{"name":"up regulation of mononuclear phagocyte aggregation","type":"exact"},{"name":"up-regulation of monocyte aggregation","type":"exact"},{"name":"up-regulation of mononuclear phagocyte aggregation","type":"exact"},{"name":"upregulation of monocyte aggregation","type":"exact"},{"name":"upregulation of mononuclear phagocyte aggregation","type":"exact"}],"termid":"GO:1900625"}


id: MONDO:0016311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin vascular disease","termid":"MONDO:0019293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Bockenheimer syndrome","secondary_identifiers":["GARD:13063","UMLS:C5679814","icd11.foundation:1659229633","Orphanet:217008","MEDGEN:1843091"],"synonyms":[{"name":"genuine diffuse phlebectasia","type":"exact"}],"termid":"MONDO:0016311","xrefs":{"Monarch":{"xref_id":"0016311"}}}


id: GO:1904049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of spontaneous neurotransmitter secretion.","definition_xrefs":["GOC:pad","PMID:22314364","GOC:PARL","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neurotransmitter secretion","termid":"GO:0046929"},{"relation_name":"is_a","term_name":"regulation of spontaneous neurotransmitter secretion","termid":"GO:1904048"},{"relation_name":"negatively_regulates","term_name":"spontaneous neurotransmitter secretion","termid":"GO:0061669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of spontaneous neurotransmitter secretion","synonyms":[{"name":"down regulation of spontaneous neurotransmitter secretion","type":"exact"},{"name":"down regulation of stimulus-independent neurotransmitter secretion","type":"exact"},{"name":"down-regulation of spontaneous neurotransmitter secretion","type":"exact"},{"name":"down-regulation of stimulus-independent neurotransmitter secretion","type":"exact"},{"name":"downregulation of spontaneous neurotransmitter secretion","type":"exact"},{"name":"downregulation of stimulus-independent neurotransmitter secretion","type":"exact"},{"name":"inhibition of spontaneous neurotransmitter secretion","type":"narrow"},{"name":"inhibition of stimulus-independent neurotransmitter secretion","type":"narrow"},{"name":"negative regulation of stimulus-independent neurotransmitter secretion","type":"exact"}],"termid":"GO:1904049"}


id: FYPO:0000798
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to anisomycin. Cells stop growing (and may die) at a concentration of anisomycin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to anisomycin","synonyms":[{"name":"hypersensitive to anisomycin","type":"exact"},{"name":"sensitive to anisomycin during mitotic cell cycle","type":"related"},{"name":"sensitive to anisomycin during vegetative growth","type":"exact"}],"termid":"FYPO:0000798"}


id: GO:0009172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine deoxyribonucleoside monophosphate, a compound consisting of a purine base linked to a deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside monophosphate catabolic process","termid":"GO:0009128"},{"relation_name":"is_a","term_name":"deoxyribonucleoside monophosphate catabolic process","termid":"GO:0009159"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside monophosphate metabolic process","termid":"GO:0009170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"purine deoxyribonucleoside monophosphate catabolic process","synonyms":[{"name":"purine deoxyribonucleoside monophosphate breakdown","type":"exact"},{"name":"purine deoxyribonucleoside monophosphate catabolism","type":"exact"},{"name":"purine deoxyribonucleoside monophosphate degradation","type":"exact"}],"termid":"GO:0009172"}


id: PBO:0090987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Tlg2","termid":"PBO:0090987"}


id: GO:0031679
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NADH + H+ + plastoquinone = NAD+ + plastoquinol.","definition_xrefs":["EC:1.6.99.6","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete NADH dehydrogenase (plastoquinone) activity (obsolete GO:0031679)","synonyms":[{"name":"NADH:plastoquinone reductase activity","type":"exact"}],"termid":"GO:0031679"}


id: SOFP:source
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"Source from which feature originates - may be a computer program or analysis, or a group. Corresponds to GFF column 2","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"source","termid":"SOFP:source"}


id: PBO:0046715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EVA1C pseudogene 1","termid":"PBO:0046715"}


id: PBO:0050374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 77","termid":"PBO:0050374"}


id: PBO:0027590
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_viability_following_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0027590"}


id: PBO:0076026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STK24 antisense RNA 1","termid":"PBO:0076026"}


id: PBO:0028007
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_cytoskeleton","termid":"PBO:0028007"}


id: FYPO:0003079
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which genetic imprinting at the mating-type locus is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating type switching","termid":"FYPO:0000468"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000293"],"is_obsolete":false,"name":"abnormal genetic imprinting at mating-type locus","synonyms":[{"name":"abnormal genetic imprinting at mating-type locus during mitotic cell cycle","type":"related"},{"name":"abnormal genetic imprinting at mating-type locus during vegetative growth","type":"exact"}],"termid":"FYPO:0003079"}


id: MONDO:1010562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acromegaly that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acromegaly, non-human animal","termid":"MONDO:1010049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acromegaly, dog","secondary_identifiers":["OMIA:000008-9615"],"termid":"MONDO:1010562","xrefs":{"Monarch":{"xref_id":"1010562"}}}


id: PBO:0048357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 68","termid":"PBO:0048357"}


id: GO:0032140
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a single adenine insertion or a deletion that results in an unpaired adenine.","definition_xrefs":["GOC:vk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single base insertion or deletion binding","termid":"GO:0032138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"single adenine insertion binding","termid":"GO:0032140"}


id: GO:1900486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of isopentenyl diphosphate biosynthetic process, mevalonate pathway.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of isoprenoid metabolic process","termid":"GO:0045828"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid biosynthetic process","termid":"GO:0071073"},{"relation_name":"is_a","term_name":"regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway","termid":"GO:2001210"},{"relation_name":"positively_regulates","term_name":"isopentenyl diphosphate biosynthetic process, mevalonate pathway","termid":"GO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281","GO:0006790","GO:0006629"],"is_obsolete":false,"name":"positive regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway","synonyms":[{"name":"activation of Ac-MVA pathway","type":"exact"},{"name":"activation of acetate-mevalonate pathway","type":"exact"},{"name":"activation of isopentenyl diphosphate anabolism, mevalonate pathway","type":"exact"},{"name":"activation of isopentenyl diphosphate biosynthetic process, mevalonate pathway","type":"narrow"},{"name":"activation of isopentenyl diphosphate formation, mevalonate pathway","type":"exact"},{"name":"activation of isopentenyl diphosphate synthesis, mevalonate pathway","type":"exact"},{"name":"positive regulation of Ac-MVA pathway","type":"exact"},{"name":"positive regulation of acetate-mevalonate pathway","type":"exact"},{"name":"positive regulation of isopentenyl diphosphate anabolism, mevalonate pathway","type":"exact"},{"name":"positive regulation of isopentenyl diphosphate formation, mevalonate pathway","type":"exact"},{"name":"positive regulation of isopentenyl diphosphate synthesis, mevalonate pathway","type":"exact"},{"name":"up regulation of Ac-MVA pathway","type":"exact"},{"name":"up regulation of acetate-mevalonate pathway","type":"exact"},{"name":"up regulation of isopentenyl diphosphate anabolism, mevalonate pathway","type":"exact"},{"name":"up regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway","type":"exact"},{"name":"up regulation of isopentenyl diphosphate formation, mevalonate pathway","type":"exact"},{"name":"up regulation of isopentenyl diphosphate synthesis, mevalonate pathway","type":"exact"},{"name":"up-regulation of Ac-MVA pathway","type":"exact"},{"name":"up-regulation of acetate-mevalonate pathway","type":"exact"},{"name":"up-regulation of isopentenyl diphosphate anabolism, mevalonate pathway","type":"exact"},{"name":"up-regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway","type":"exact"},{"name":"up-regulation of isopentenyl diphosphate formation, mevalonate pathway","type":"exact"},{"name":"up-regulation of isopentenyl diphosphate synthesis, mevalonate pathway","type":"exact"},{"name":"upregulation of Ac-MVA pathway","type":"exact"},{"name":"upregulation of acetate-mevalonate pathway","type":"exact"},{"name":"upregulation of isopentenyl diphosphate anabolism, mevalonate pathway","type":"exact"},{"name":"upregulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway","type":"exact"},{"name":"upregulation of isopentenyl diphosphate formation, mevalonate pathway","type":"exact"},{"name":"upregulation of isopentenyl diphosphate synthesis, mevalonate pathway","type":"exact"}],"termid":"GO:1900486"}


id: MONDO:0013736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myopathy, centronuclear, 3 (obsolete MONDO:0013736)","termid":"MONDO:0013736","xrefs":{"Monarch":{"xref_id":"0013736"}}}


id: PBO:0090444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small endoribonuclease with 2 transmembrane domains","termid":"PBO:0090444"}


id: GO:0033493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of esculetin, 6,7-dihydroxycoumarin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coumarin biosynthetic process","termid":"GO:0009805"},{"relation_name":"is_a","term_name":"esculetin metabolic process","termid":"GO:0033492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"esculetin biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5349"],"synonyms":[{"name":"esculetin anabolism","type":"exact"},{"name":"esculetin biosynthesis","type":"exact"},{"name":"esculetin formation","type":"exact"},{"name":"esculetin synthesis","type":"exact"}],"termid":"GO:0033493"}


id: GO:0036371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, the T-tubule. The T-tubule is an invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril.","definition_xrefs":["GOC:rl","PMID:16292983","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to plasma membrane","termid":"GO:0072659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to T-tubule","synonyms":[{"name":"protein localisation to T-tubule","type":"exact"},{"name":"protein localization to T tubule","type":"exact"},{"name":"protein localization to transverse tubule","type":"exact"}],"termid":"GO:0036371"}


id: GO:0140981
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an omega-methyl-medium-chain fatty acid + O2 + reduced [NADPH--hemoprotein reductase] = an omega-hydroxy-medium-chain fatty acid + H+ + H2O + oxidized [NADPH--hemoprotein reductase]. A medium-chain fatty acid has an aliphatic tail containing 6 to 12 carbons.","definition_xrefs":["RHEA:75279"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid omega-hydroxylase activity","termid":"GO:0120250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"medium-chain fatty acid omega-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-19719"],"termid":"GO:0140981"}


id: PBO:0080619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 55","termid":"PBO:0080619"}


id: MONDO:0700139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm that occurs in dogs.","definition_xrefs":["NCIT:C134526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dog disease","termid":"MONDO:0024919"},{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine neoplasm","termid":"MONDO:0700139","xrefs":{"Monarch":{"xref_id":"0700139"}}}


id: GO:0102879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (+)-thujopsene + diphosphoric acid.","definition_xrefs":["GOC:pz","RHEA:30375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(+)-thujopsene synthase activity","secondary_identifiers":["EC:4.2.3.79","MetaCyc:RXN-8418"],"termid":"GO:0102879"}


id: PBO:0075669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase long chain base subunit 1 pseudogene 4","termid":"PBO:0075669"}


id: MONDO:0017045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuroectodermal-endocrine syndrome is characterized by a combination of endocrine and neuroectodermal abnormalities, including low growth hormone levels, delayed puberty, type II diabetes mellitus, mild intellectual deficit, sensorineural deafness, characteristic facial appearance and alopecia. It has been described in four sibs from Myanmar.","definition_xrefs":["Orphanet:2676"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"polyendocrinopathy","termid":"MONDO:0015126"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroectodermal-endocrine syndrome","secondary_identifiers":["SCTID:724090001","GARD:3959"],"synonyms":[{"name":"Oerter-Friedman-Anderson syndrome","type":"exact"},{"name":"neuroectodermal endocrine syndrome","type":"related"}],"termid":"MONDO:0017045","xrefs":{"Monarch":{"xref_id":"0017045"}}}


id: FYPO:0001637
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-glycine measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular glycine level","synonyms":[{"name":"normal cellular L-glycine level","type":"exact"},{"name":"normal cellular glycine level during mitotic cell cycle","type":"related"},{"name":"normal cellular glycine level during vegetative growth","type":"exact"},{"name":"normal level of glycine in cell","type":"exact"}],"termid":"FYPO:0001637"}


id: MONDO:0060627
data:
  {"annotated_genes":["SJAG_03292"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84571],"is_not":false,"summary":null,"term":"MONDO:0060627"}]},"cv_name":"mondo","definition":"A rare, genetic, syndromic intellectual disability characterized by global developmental delay, early-onset seizures, cerebellar atrophy, osteopenia, nystagmus and dysmorphic facial features, including bitemporal narrowing, prominent forehead, anteverted nares. Dysarthria, dysmetria, ataxic gait, spasticity and dysmorphic features have also been associated.","definition_xrefs":["Orphanet:529665"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"disorder of GPI anchor biosynthesis","termid":"MONDO:0024321"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03292":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0024322","MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"glycosylphosphatidylinositol biosynthesis defect 15","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4540520","GARD:17969","OMIM:617810","MEDGEN:1615160"],"synonyms":[{"name":"GPIBD15","type":"related"},{"name":"developmental delay, epilepsy, cerebellar atrophy, and osteopenia","type":"related"},{"name":"glycosylphosphatidylinositol biosynthesis defect 15","type":"exact"}],"termid":"MONDO:0060627","terms_by_termid":{"MONDO:0060627":null},"xrefs":{"Monarch":{"xref_id":"0060627"}}}


id: PBO:0066746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 44","termid":"PBO:0066746"}


id: PBO:0044403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 115, pseudogene","termid":"PBO:0044403"}


id: GO:0018324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The oxidation of peptidyl-cysteine to form peptidyl-L-cysteine sulfenic acid, found in the active site of NADH peroxidase, nitrile hydratase, and peptide methionine sulfoxide reductase.","definition_xrefs":["RESID:AA0205","PMID:2501303"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via L-cysteine sulfenic acid (obsolete GO:0018324)","synonyms":[{"name":"enzyme active site formation via L-cysteine sulphenic acid","type":"exact"}],"termid":"GO:0018324"}


id: MONDO:0013228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondylo-megaepiphyseal-metaphyseal dysplasia","secondary_identifiers":["Orphanet:228387","UMLS:C2750066","MEDGEN:412869","OMIM:613330","GARD:17154","MESH:C567639"],"synonyms":[{"name":"SMMD","type":"related"},{"name":"spondylo-megaepiphyseal-metaphyseal dysplasia","type":"exact"}],"termid":"MONDO:0013228","xrefs":{"Monarch":{"xref_id":"0013228"}}}


id: SO:0000089
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene located in kinetoplast sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"kinetoplast","termid":"SO:0000741"},{"relation_name":"is_a","term_name":"mt_gene","termid":"SO:0000088"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetoplast_gene","synonyms":[{"name":"kinetoplast gene","type":"exact"}],"termid":"SO:0000089"}


id: PBO:0065194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRPF4B pseudogene 1","termid":"PBO:0065194"}


id: PBO:0071327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 4","termid":"PBO:0071327"}


id: MONDO:0958258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ACTH-independent Cushing syndrome","termid":"MONDO:0020529"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cushing syndrome due to cortisol-producing adrenocortical adenoma","secondary_identifiers":["UMLS:C5816799","MEDGEN:1853161","Orphanet:642788"],"termid":"MONDO:0958258","xrefs":{"Monarch":{"xref_id":"0958258"}}}


id: PBO:0052053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KAT8 regulatory NSL complex subunit 2","termid":"PBO:0052053"}


id: FYPO:0006023
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is elongated, has two or more nuclei and more than one septum, and the septa are neither grouped together nor all placed with each septum forming a compartment with a single nucleus. Septa may be present singly or in pairs, and in any location relative to the nuclei.","definition_xrefs":["PomBase:mah","PMID:11294907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated multinucleate vegetative cell","termid":"FYPO:0000133"},{"relation_name":"is_a","term_name":"elongated multiseptate vegetative cell","termid":"FYPO:0000223"},{"relation_name":"is_a","term_name":"multinucleate multiseptate vegetative cell","termid":"FYPO:0001252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000005","FYPO:0000032","FYPO:0000631"],"is_obsolete":false,"name":"elongated multinucleate multiseptate vegetative cell, irregular septum position","synonyms":[{"name":"elongated multinucleate multiseptate vegetative cell, irregular septum position during mitotic cell cycle","type":"related"},{"name":"elongated multinucleate multiseptate vegetative cell, irregular septum position during vegetative growth","type":"exact"}],"termid":"FYPO:0006023"}


id: MONDO:0006410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A proliferation of endometrial cells resulting in glandular enlargement and budding without changes in the basic structure of the endometrium. Epithelial atypia may be present or absent.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperplasia","termid":"MONDO:0005043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"simple endometrial hyperplasia","secondary_identifiers":["SCTID:198324001","MEDGEN:96819","NCIT:C35463","UMLS:C0456483","EFO:1000525","ICD9:621.31"],"termid":"MONDO:0006410","xrefs":{"Monarch":{"xref_id":"0006410"}}}


id: PATO:0002419
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An affinity inhering in a tissue constituent by virtue of the bearer exhibiting a molecular interaction for eosin dye.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"affinity","termid":"PATO:0002070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eosinophilic","termid":"PATO:0002419"}


id: GO:0031604
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The subunits forming the outer ring of the core complex of a proteasome located in the nucleus of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome core complex, alpha-subunit complex","termid":"GO:0019773"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear proteasome core complex","termid":"GO:0031601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"nuclear proteasome core complex, alpha-subunit complex","termid":"GO:0031604"}


id: PATO:0002145
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A radiopacity that is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"radiopacity","termid":"PATO:0002136"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased radiopacity","termid":"PATO:0002145"}


id: MONDO:0859185
data:
  {"annotated_genes":["SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85701],"is_not":false,"summary":null,"term":"MONDO:0859185"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03081":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia and dysmorphic facies","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1794184","OMIM:619503","UMLS:C5561974"],"termid":"MONDO:0859185","terms_by_termid":{"MONDO:0859185":null},"xrefs":{"Monarch":{"xref_id":"0859185"}}}


id: FYPO:0000788
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3 acetylation during vegetative growth","termid":"FYPO:0002361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0001320","FYPO:0002274","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal histone H3-K14 acetylation during vegetative growth","synonyms":[{"name":"abnormal histone H3-K14 acetylation during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3K14 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000788"}


id: PBO:0000640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complex subunit Ssr3","termid":"PBO:0000640"}


id: FYPO:0006077
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of lysine at position 9 of histone H3 occurs to a greater extent than normal at ribosomal DNA.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0002494","FYPO:0005447","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K9 methylation at rDNA during vegetative growth","synonyms":[{"name":"increased histone H3 K9 methylation at rDNA during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 methylation at rDNA during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 methylation at ribosomal DNA during vegetative growth","type":"exact"},{"name":"increased histone H3K9 methylation at rDNA during vegetative growth","type":"exact"},{"name":"increased histone H3K9me at rDNA during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 methylation at rDNA during vegetative growth","type":"exact"}],"termid":"FYPO:0006077"}


id: GO:0010172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the embryonic soma are generated and organized.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"body morphogenesis","termid":"GO:0010171"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic body morphogenesis","termid":"GO:0010172"}


id: PBO:0035994
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_movement_within_plasma_membrane_during_vegetative_growth","termid":"PBO:0035994"}


id: FYPO:0005543
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of actomyosin contractile ring contraction is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0000032","FYPO:0004803","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased duration of actomyosin contractile ring contraction","synonyms":[{"name":"increased duration of actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"increased duration of actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"increased duration of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"prolonged actomyosin contractile ring contraction","type":"exact"}],"termid":"FYPO:0005543"}


id: GO:0010727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways involving hydrogen peroxide.","definition_xrefs":["GOC:tb","GOC:hjd","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrogen peroxide metabolic process","termid":"GO:0010310"},{"relation_name":"is_a","term_name":"negative regulation of reactive oxygen species metabolic process","termid":"GO:2000378"},{"relation_name":"negatively_regulates","term_name":"hydrogen peroxide metabolic process","termid":"GO:0042743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hydrogen peroxide metabolic process","synonyms":[{"name":"negative regulation of hydrogen peroxide metabolism","type":"exact"}],"termid":"GO:0010727"}


id: GO:0006805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a xenobiotic compound, a compound foreign to the organism exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical.","definition_xrefs":["GOC:cab2","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"},{"relation_name":"part_of","term_name":"cellular response to xenobiotic stimulus","termid":"GO:0071466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"xenobiotic metabolic process","secondary_identifiers":["Reactome:R-HSA-2161541","Reactome:R-HSA-9748784","Reactome:R-HSA-211981","Wikipedia:Drug_metabolism","Wikipedia:Xenobiotic_metabolism","GO:0017144","Reactome:R-HSA-211859"],"synonyms":[{"name":"drug metabolic process","type":"related"},{"name":"drug metabolism","type":"related"},{"name":"xenobiotic metabolism","type":"exact"}],"termid":"GO:0006805"}


id: PBO:0115006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial large ribosomal subunit assembly GTPase Mtg2","termid":"PBO:0115006"}


id: GO:0004357
data:
  {"annotated_genes":["SJAG_00988"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92794],"is_not":false,"summary":null,"term":"GO:0004357"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteine + L-glutamate + ATP = L-gamma-glutamyl-L-cysteine + ADP + 2 H+ + phosphate.","definition_xrefs":["RHEA:13285","EC:6.3.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00988":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glutamate-cysteine ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GLUTCYSLIG-RXN","Reactome:R-HSA-174367","KEGG_REACTION:R00894","Reactome:R-HSA-5602892"],"synonyms":[{"name":"L-glutamate:L-cysteine gamma-ligase (ADP-forming) activity","type":"related"},{"name":"gamma-glutamyl-L-cysteine synthetase activity","type":"related"},{"name":"gamma-glutamylcysteine synthetase activity","type":"related"},{"name":"gamma-glutamylcysteinyl synthetase activity","type":"related"}],"termid":"GO:0004357","terms_by_termid":{"GO:0004357":null}}


id: PBO:0001559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminoacyl-tRNA hydrolase (predicted)","termid":"PBO:0001559"}


id: PBO:0017040
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae GAR1","termid":"PBO:0017040"}


id: MONDO:0006846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe hypertension that is characterized by rapid onset of extremely high blood pressure and hypertension-mediated organ damage.","definition_xrefs":["PMID:38658108","NCIT:P378","PMID:30165516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertensive disorder","termid":"MONDO:0005044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant hypertension","secondary_identifiers":["EFO:1001031","MedDRA:10025600","MEDGEN:9374","MESH:D006974","SCTID:70272006","DOID:10824","UMLS:C0020540"],"synonyms":[{"name":"MHT","type":"broad"},{"name":"accelerated-malignant hypertension","type":"exact"},{"name":"hypertensive emergency","type":"exact"},{"name":"malignant phase hypertension","type":"exact"}],"termid":"MONDO:0006846","xrefs":{"Monarch":{"xref_id":"0006846"}}}


id: GO:0100048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates phosphatidylcholine biosynthetic process.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphatidylcholine biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100048)","termid":"GO:0100048"}


id: MONDO:0014518
data:
  {"annotated_genes":["SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86212],"is_not":false,"summary":null,"term":"MONDO:0014518"}]},"cv_name":"mondo","definition":"Any isolated hereditary giant platelet disorder in which the cause of the disease is a mutation in the PRKACG gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"platelet-type bleeding disorder 19","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111048","GARD:17738","OMIM:616176","Orphanet:438207","UMLS:C4015405","MEDGEN:863842"],"synonyms":[{"name":"BDPLT19","type":"exact"},{"name":"PRKACG isolated hereditary giant platelet disorder","type":"exact"},{"name":"bleeding disorder, platelet-type, 19","type":"related"},{"name":"isolated hereditary giant platelet disorder caused by mutation in PRKACG","type":"exact"},{"name":"severe autosomal recessive macrothrombocytopenia","type":"exact"}],"termid":"MONDO:0014518","terms_by_termid":{"MONDO:0014518":null},"xrefs":{"Monarch":{"xref_id":"0014518"}}}


id: GO:0001534
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that links the outer microtubule doublet of a 9+2 type ciliary or flagellar axoneme with the sheath that surrounds the central pair of microtubules. Composed of a stalk that attaches to each doublet microtubule and a globular structure (spoke head) that projects toward the central pair of microtubules.","definition_xrefs":["PMID:25694453","PMID:9450971","ISBN:0124325653","PMID:34871179","GOC:krc","PMID:22118931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"axoneme","termid":"GO:0005930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"radial spoke","secondary_identifiers":["Wikipedia:Radial_spoke"],"termid":"GO:0001534"}


id: PBO:0056880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS10-NBL1 readthrough","termid":"PBO:0056880"}


id: GO:0140953
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl27-[histone H3] + S-adenosyl-L-methionine = H+ + N6-methyl-L-lysyl27-[histone H3] + S-adenosyl-L-homocysteine. This reaction is the addition of a single methyl group to the unmethylated lysine residue at position 27 of histone H3, producing histone H3K27me.","definition_xrefs":["RHEA:60296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K27 methyltransferase activity","termid":"GO:0046976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008276","GO:0016741","GO:0016740","GO:0140096","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"histone H3K27 monomethyltransferase activity","secondary_identifiers":["EC:2.1.1.369"],"synonyms":[{"name":"histone H3-K27 methylation","type":"broad"},{"name":"histone H3-K27 monomethylase activity","type":"exact"},{"name":"histone H3K27 methylation","type":"broad"},{"name":"histone H3K27 monomethylase activity","type":"exact"},{"name":"histone lysine N-monomethyltransferase activity (H3-K27 specific)","type":"exact"}],"termid":"GO:0140953"}


id: PR:P59289
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3703 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P59289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L37-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB17E12.05","synonyms":[{"name":"L37-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpl3703","type":"exact"}],"termid":"PR:P59289"}


id: GO:0015001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete high-potential iron-sulfur carrier (obsolete GO:0015001)","synonyms":[{"name":"HiPIP","type":"related"},{"name":"high-potential iron-sulfur carrier","type":"exact"},{"name":"high-potential iron-sulphur carrier","type":"exact"}],"termid":"GO:0015001"}


id: FYECO:0000220
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A nitrogen source shift condition in which cells are first grown in a medium with glutamate as the nitrogen source, and then shifted to a medium with proline as the nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen source shift","termid":"FYECO:0000221"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrogen source shift, glutamate to proline","termid":"FYECO:0000220"}


id: PBO:0078071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 61 (non-functional)","termid":"PBO:0078071"}


id: PBO:0091701
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not complemented by human ATR","termid":"PBO:0091701"}


id: GO:0160080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + indole(in) = ADP + phosphate + indole(out).","definition_xrefs":["PMID:37146609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ABC-type indole transporter activity","termid":"GO:0160080"}


id: PBO:0046576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 18","termid":"PBO:0046576"}


id: PBO:0056405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane associated ring-CH-type finger 3","termid":"PBO:0056405"}


id: PBO:0041850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 1","termid":"PBO:0041850"}


id: GO:1990477
data:
  {"annotated_genes":["SJAG_03939","SJAG_04768","SJAG_02382","SJAG_00456","SJAG_00701"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86966,90270,108743,111345,112243],"is_not":false,"summary":null,"term":"GO:1990477"}]},"cv_name":"cellular_component","definition":"Protein complex formed by an RNA binding protein Red1, an RNA helicase Mtl1, Red5, Rmn1, Iss10/Pir1, and Ars2/Pir2. This complex is required for the recruitment of the nuclear exosome to Mmi1 nuclear focus. It is likely related to the human CBCN complex. This complex is also known as RNA silencing (NURS) complex.","definition_xrefs":["PMID:24210919","PMID:24713849","PMID:32012158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00456":null,"SJAG_00701":null,"SJAG_02382":null,"SJAG_03939":null,"SJAG_04768":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MTREC complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990345"],"synonyms":[{"name":"Mtl1-Red1 core complex","type":"exact"},{"name":"NURS complex","type":"exact"},{"name":"PAXT complex","type":"exact"}],"termid":"GO:1990477","terms_by_termid":{"GO:1990477":null}}


id: GO:0036394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of amylase from a cell.","definition_xrefs":["GOC:jc","PMID:19028687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"amylase secretion","synonyms":[{"name":"amylase release","type":"exact"}],"termid":"GO:0036394"}


id: GO:1902047
data:
  {"annotated_genes":["SJAG_02060","SJAG_04469","SJAG_02125","SJAG_02059","SJAG_02344"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105881],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902267"},{"annotations":[108930,116846,108936,57725,110422,108942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903711"},{"annotations":[116847,68380,108931,108943,110423,108937,109844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903710"}]},"cv_name":"biological_process","definition":"The process in which a polyamine macromolecule is transported across a membrane.","definition_xrefs":["GOC:vw","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine transport","termid":"GO:0015846"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02059":null,"SJAG_02060":null,"SJAG_02125":null,"SJAG_02344":null,"SJAG_04469":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"polyamine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:1905122"],"synonyms":[{"name":"polyamine import","type":"related"},{"name":"polyamine uptake","type":"related"}],"termid":"GO:1902047","terms_by_termid":{"GO:1902267":null,"GO:1903710":null,"GO:1903711":null}}


id: PBO:0042706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUGBP Elav-like family member 5","termid":"PBO:0042706"}


id: MONDO:0002704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete appendix adenocarcinoma (obsolete MONDO:0002704)","termid":"MONDO:0002704","xrefs":{"Monarch":{"xref_id":"0002704"}}}


id: PBO:0110389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSL complex subunit 3B","termid":"PBO:0110389"}


id: PBO:0063940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl cis/trans isomerase, NIMA-interacting 1","termid":"PBO:0063940"}


id: PBO:0109603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A5","termid":"PBO:0109603"}


id: PATO:0002201
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality inhering ina bearer by virtue of the bearer's unequal distribution of fine motor skill between its left and right hands or feet.","definition_xrefs":["birnlex:2178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral quality","termid":"PATO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"handedness","termid":"PATO:0002201"}


id: MONDO:0013141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant macrothrombocytopenia TUBB1-related (obsolete MONDO:0013141)","secondary_identifiers":["NANDO:2200667"],"termid":"MONDO:0013141","xrefs":{"Monarch":{"xref_id":"0013141"}}}


id: GO:1905929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of invadopodium disassembly.","definition_xrefs":["GOC:TermGenie","PMID:15684033","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of invadopodium disassembly (obsolete GO:1905929)","synonyms":[{"name":"activation of invadopodium disassembly","type":"narrow"},{"name":"up regulation of invadopodium disassembly","type":"exact"},{"name":"up-regulation of invadopodium disassembly","type":"exact"},{"name":"upregulation of invadopodium disassembly","type":"exact"}],"termid":"GO:1905929"}


id: GO:0004195
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of Leu-Xaa bond in angiotensinogen to generate angiotensin I.","definition_xrefs":["EC:3.4.23.15"],"gene_count":0,"genotype_count":0,"name":"obsolete renin activity (obsolete GO:0004195)","synonyms":[{"name":"angiotensin-forming enzyme activity","type":"related"},{"name":"angiotensinogenase activity","type":"related"},{"name":"renin activity","type":"exact"}],"termid":"GO:0004195"}


id: PBO:0078872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily M member 6","termid":"PBO:0078872"}


id: PBO:0015697
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae SKN7","termid":"PBO:0015697"}


id: SO:0000813
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cDNA invalidated clone by partial processing.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"invalidated_by_partial_processing","termid":"SO:0000416"},{"relation_name":"is_a","term_name":"invalidated_cDNA_clone","termid":"SO:0000809"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partially_processed_cDNA_clone","synonyms":[{"name":"partially processed cDNA clone","type":"exact"}],"termid":"SO:0000813"}


id: PBO:0061941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily Q member 1","termid":"PBO:0061941"}


id: PBO:0065745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PYCARD antisense RNA 1","termid":"PBO:0065745"}


id: PBO:0111924
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLTH domain","termid":"PBO:0111924"}


id: PBO:0069699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 978, pseudogene","termid":"PBO:0069699"}


id: GO:0008842
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: diphosphate + a purine nucleoside = monophosphate + a purine mononucleotide.","definition_xrefs":["EC:2.7.1.143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"nucleoside kinase activity","termid":"GO:0019206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"diphosphate-purine nucleoside kinase activity","secondary_identifiers":["MetaCyc:2.7.1.143-RXN"],"synonyms":[{"name":"diphosphate-dependent nucleoside kinase activity","type":"related"},{"name":"diphosphate:purine nucleoside phosphotransferase activity","type":"related"},{"name":"pyrophosphate-dependent nucleoside kinase activity","type":"related"},{"name":"pyrophosphate-purine nucleoside kinase activity","type":"related"}],"termid":"GO:0008842"}


id: PBO:0088028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP protein; component of the small (ribosomal) subunit (SSU) processosome containing U3 snoRNA; required for the biogenesis of18S rRNA","termid":"PBO:0088028"}


id: GO:0099013
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by a neuronal dense core vesicle membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dense core granule lumen","termid":"GO:0098898"},{"relation_name":"part_of","term_name":"neuronal dense core vesicle","termid":"GO:0098992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"neuronal dense core vesicle lumen","termid":"GO:0099013"}


id: PBO:0027780
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_ribosomal_S6_protein_dephosphorylation_during_cellular_response_to_nitrogen_starvation","termid":"PBO:0027780"}


id: PBO:0078910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 1-1","termid":"PBO:0078910"}


id: PATO:0002139
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer being suitable for use as food.","definition_xrefs":["PATOC:VO"],"direct_ancestors":[{"relation_name":"is_a","term_name":"edibility","termid":"PATO:0002138"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"edible","termid":"PATO:0002139"}


id: PBO:0072883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SBF1 pseudogene 2","termid":"PBO:0072883"}


id: PBO:0054337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1730","termid":"PBO:0054337"}


id: PBO:0070527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 26","termid":"PBO:0070527"}


id: PBO:0076781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEA domain transcription factor 4","termid":"PBO:0076781"}


id: GO:1903804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of glycine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GO_REF:0000075","PMID:23895341","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycine transport","termid":"GO:0015816"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"glycine import across plasma membrane","secondary_identifiers":["GO:0036233"],"synonyms":[{"name":"glycine import","type":"broad"},{"name":"glycine import into cell","type":"exact"}],"termid":"GO:1903804"}


id: MONDO:0007137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by total or partial anosmia at birth. So far, 15 patients have been described. The anosmia is caused by a defect in the development of the olfactory bulbs or by replacement of the olfactory epithelium by respiratory epithelium. The mode of transmission appears to be autosomal dominant with incomplete penetrance. Isolated congenital anosmia is found in some parents of individuals with Kallman syndrome.","definition_xrefs":["Orphanet:88620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anosmia","termid":"MONDO:0010528"},{"relation_name":"is_a","term_name":"hereditary otorhinolaryngologic disease","termid":"MONDO:0018751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated congenital anosmia","secondary_identifiers":["OMIM:107200","icd11.foundation:1603572540","UMLS:C0393778","MEDGEN:95992","MESH:C535983","GARD:9486","SCTID:230502003"],"synonyms":[{"name":"ANIC","type":"related"},{"name":"anosmia, congenital","type":"related"},{"name":"anosmia, isolated congenital","type":"related"},{"name":"congenital anosmia","type":"related"}],"termid":"MONDO:0007137","xrefs":{"Monarch":{"xref_id":"0007137"}}}


id: MONDO:0015501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","secondary_identifiers":["Orphanet:156237"],"termid":"MONDO:0015501","xrefs":{"Monarch":{"xref_id":"0015501"}}}


id: PR:Q92349
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spo7 gene.","definition_xrefs":["UniProtKB:Q92349","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 79 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.04","synonyms":[{"name":"Spom972h-spo7","type":"exact"}],"termid":"PR:Q92349"}


id: MONDO:0000822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lymphoproliferative syndrome (obsolete MONDO:0000822)","termid":"MONDO:0000822","xrefs":{"Monarch":{"xref_id":"0000822"}}}


id: PBO:0063122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase family member 6","termid":"PBO:0063122"}


id: MOD:01771
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The farnesyl cation protein modification reporter fragment produced by fragmentation of some farnesyl modified residues.","definition_xrefs":["PubMed:15609361","PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"farnesylated residue","termid":"MOD:00437"},{"relation_name":"is_a","term_name":"modification reporter fragment","termid":"MOD:01520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl reporter fragment","synonyms":[{"name":"(2E,6E)-3,7,11-trimethyldodeca-2,6,10-trien-1-ylium","type":"exact"},{"name":"Farn+","type":"exact"},{"name":"farnesyl cation","type":"exact"}],"termid":"MOD:01771"}


id: GO:0019402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving galactitol, the hexitol derived by the reduction of the aldehyde group of either D- or L-galactose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexitol metabolic process","termid":"GO:0006059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"galactitol metabolic process","synonyms":[{"name":"galactitol metabolism","type":"exact"}],"termid":"GO:0019402"}


id: PBO:0088616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane protein, TspO/MBR-related, implicated in lipid/sterol transport, tspO","termid":"PBO:0088616"}


id: PBO:0036026
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_proline","termid":"PBO:0036026"}


id: FYPO:0002987
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, contains two nuclei, has a larger diameter and volume than normal, and has an abnormal shape featuring a constriction at the center of the cell, corresponding to the cell division site. In some such cells, the diameter at the ends is much greater than in wild-type cells.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"},{"relation_name":"is_a","term_name":"inviable swollen vegetative cell with abnormal cell shape","termid":"FYPO:0002415"},{"relation_name":"is_a","term_name":"swollen multinucleate vegetative cell","termid":"FYPO:0004257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0001985","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, swollen binucleate cell with central constriction","secondary_identifiers":["FYPO:0003288"],"synonyms":[{"name":"inviable after spore germination, binucleate without cell division, swollen cell with central constriction","type":"exact"},{"name":"inviable after spore germination, undivided swollen binucleate cell with central constriction","type":"exact"},{"name":"inviable after spore germination, without cell division, swollen binucleate cell with constricted region at cell division site","type":"exact"},{"name":"inviable after spore germination, without cell division, swollen binucleate dumbbell-shaped cell","type":"related"},{"name":"inviable after spore germination, without cell division, swollen multinucleate cell with central constriction","type":"related"},{"name":"inviable following spore germination, without cell division, swollen binucleate cell with central constriction","type":"exact"},{"name":"inviable germinated spore, without cell division, swollen binucleate cell with central constriction","type":"exact"},{"name":"lethal after spore germination, without cell division, swollen binucleate cell with central constriction","type":"exact"}],"termid":"FYPO:0002987"}


id: SO:0001014
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intronic region that has an attribute.","direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript_region","termid":"SO:0000835"},{"relation_name":"part_of","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intron_domain","synonyms":[{"name":"intron domain","type":"exact"}],"termid":"SO:0001014"}


id: PATO:0001825
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A wetness quality that is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"wet","termid":"PATO:0001823"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased wetness","termid":"PATO:0001825"}


id: PBO:0066266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 1 member A1","termid":"PBO:0066266"}


id: PBO:0001413
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates trr1","termid":"PBO:0001413"}


id: MONDO:0014509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any vitelliform macular dystrophy in which the cause of the disease is a mutation in the IMPG2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult-onset foveomacular vitelliform dystrophy","termid":"MONDO:0011979"},{"relation_name":"is_a","term_name":"IMPG2-related dominant retinopathy","termid":"MONDO:0700242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"vitelliform macular dystrophy 5","secondary_identifiers":["MEDGEN:863780","OMIM:616152","UMLS:C4015343","GARD:16065"],"synonyms":[{"name":"IMPG2 vitelliform macular dystrophy","type":"exact"},{"name":"VMD5","type":"related"},{"name":"macular dystrophy, vitelliform, 5","type":"exact"},{"name":"macular dystrophy, vitelliform, type 5","type":"exact"},{"name":"vitelliform macular dystrophy caused by mutation in IMPG2","type":"exact"}],"termid":"MONDO:0014509","xrefs":{"Monarch":{"xref_id":"0014509"}}}


id: MOD:01768
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl group with a palmitoleyloxy group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"},{"relation_name":"is_a","term_name":"palmitoleylated residue","termid":"MOD:01423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"O-palmitoleylated residue","termid":"MOD:01768"}


id: PBO:0075807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small RNA binding exonuclease protection factor La like 6, pseudogene","termid":"PBO:0075807"}


id: GO:0008585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the female gonad over time, from its formation to the mature structure.","definition_xrefs":["GOC:tb","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonad development","termid":"GO:0008406"},{"relation_name":"part_of","term_name":"development of primary female sexual characteristics","termid":"GO:0046545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female gonad development","secondary_identifiers":["GO:0061039"],"synonyms":[{"name":"ovarian development","type":"related"},{"name":"ovary development","type":"related"}],"termid":"GO:0008585"}


id: MONDO:0009266
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gaucher disease type 2 is the acute neurological form of Gaucher disease (GD). It is characterized by early-onset and severe neurological involvement of the brainstem, associated with an organomegaly and generally leading to death before the age of 2.","definition_xrefs":["Orphanet:77260"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"lysosomal storage disease","termid":"MONDO:0002561"},{"relation_name":"excluded_subClassOf","term_name":"interstitial lung disease specific to childhood","termid":"MONDO:0017014"},{"relation_name":"excluded_subClassOf","term_name":"sphingolipidosis","termid":"MONDO:0019255"},{"relation_name":"excluded_subClassOf","term_name":"cerebral lipidosis with dementia","termid":"MONDO:0020143"},{"relation_name":"is_a","term_name":"Gaucher disease","termid":"MONDO:0018150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005328","MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"Gaucher disease type II","secondary_identifiers":["NANDO:2201211","DOID:0110958","MEDGEN:78652","GARD:2442","NANDO:1200058","SCTID:12246008","UMLS:C0268250","OMIM:230900"],"synonyms":[{"name":"GD II","type":"exact"},{"name":"Gaucher disease type 2","type":"related"},{"name":"Gaucher disease type II","type":"exact"},{"name":"Gaucher disease, acute neuronopathic type","type":"exact"},{"name":"Gaucher disease, infantile cerebral","type":"related"},{"name":"Gaucher disease, type 2","type":"related"},{"name":"Gaucher disease, type II","type":"related"},{"name":"Gaucher's disease type II","type":"exact"},{"name":"Gd 2","type":"related"},{"name":"acute neuronopathic Gaucher disease","type":"exact"},{"name":"infantile cerebral Gaucher disease","type":"exact"}],"termid":"MONDO:0009266","xrefs":{"Monarch":{"xref_id":"0009266"}}}


id: PBO:0068107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 414","termid":"PBO:0068107"}


id: FYPO:0007330
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to formaldehyde. Cells stop growing (and may die) at a concentration of formaldehyde that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0000003","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to formaldehyde","synonyms":[{"name":"hypersensitive to formaldehyde","type":"exact"},{"name":"sensitive to formaldehyde during mitotic cell cycle","type":"related"},{"name":"sensitive to formaldehyde during vegetative growth","type":"exact"}],"termid":"FYPO:0007330"}


id: PBO:0064259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing A7","termid":"PBO:0064259"}


id: PBO:0027384
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete_mitotic_sister_chromatid_segregation,_with_chromatin_bridge","termid":"PBO:0027384"}


id: MONDO:0000240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aspergillosis that is a serious fungal infection of the lung with pneumonia caused by Aspergillus, which spreads to other parts of the body through bloodstream in patients with acute leukemia and recipients of tissue transplants. Clinical symptoms include pulmonary nodules and hemorrhage.","definition_xrefs":["DOID:0050073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary aspergilloma","termid":"MONDO:0000266"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invasive aspergillosis","secondary_identifiers":["SCTID:721798004","icd11.foundation:1314810340","MEDGEN:922866","UMLS:C0238013"],"termid":"MONDO:0000240","xrefs":{"Monarch":{"xref_id":"0000240"}}}


id: PBO:0024825
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by Arabidopsis thaliana AtSGP1","termid":"PBO:0024825"}


id: PBO:0030564
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_tyrosine_level","termid":"PBO:0030564"}


id: GO:1904193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cholangiocyte apoptotic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24498161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell apoptotic process","termid":"GO:1904036"},{"relation_name":"is_a","term_name":"regulation of cholangiocyte apoptotic process","termid":"GO:1904192"},{"relation_name":"negatively_regulates","term_name":"cholangiocyte apoptotic process","termid":"GO:1902488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cholangiocyte apoptotic process","synonyms":[{"name":"down regulation of cholangiocyte apoptosis","type":"narrow"},{"name":"down regulation of cholangiocyte apoptotic process","type":"exact"},{"name":"down regulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"down regulation of epithelial cell of bile duct apoptotic process","type":"exact"},{"name":"down-regulation of cholangiocyte apoptosis","type":"narrow"},{"name":"down-regulation of cholangiocyte apoptotic process","type":"exact"},{"name":"down-regulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"down-regulation of epithelial cell of bile duct apoptotic process","type":"exact"},{"name":"downregulation of cholangiocyte apoptosis","type":"narrow"},{"name":"downregulation of cholangiocyte apoptotic process","type":"exact"},{"name":"downregulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"downregulation of epithelial cell of bile duct apoptotic process","type":"exact"},{"name":"inhibition of cholangiocyte apoptosis","type":"narrow"},{"name":"inhibition of cholangiocyte apoptotic process","type":"narrow"},{"name":"inhibition of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"inhibition of epithelial cell of bile duct apoptotic process","type":"narrow"},{"name":"negative regulation of cholangiocyte apoptosis","type":"narrow"},{"name":"negative regulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"negative regulation of epithelial cell of bile duct apoptotic process","type":"exact"}],"termid":"GO:1904193"}


id: GO:0039711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a helical viral capsid in the cytoplasm. Occurs by assembling around the viral genome.","definition_xrefs":["VZ:1950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic capsid assembly","termid":"GO:0039709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoplasmic helical capsid assembly","termid":"GO:0039711"}


id: PBO:0040473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attractin","termid":"PBO:0040473"}


id: MONDO:0060532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital heart defects and skeletal malformations syndrome","secondary_identifiers":["MEDGEN:1618340","Orphanet:643503","OMIM:617602","UMLS:C4539857"],"synonyms":[{"name":"CHDSKM","type":"related"},{"name":"congenital heart defects and skeletal malformations syndrome","type":"exact"},{"name":"marfanoid habitus-facial dysmorphism-skeletal abnormality-heart defect syndrome","type":"exact"}],"termid":"MONDO:0060532","xrefs":{"Monarch":{"xref_id":"0060532"}}}


id: PBO:0110162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA specific adenosine-34 deaminase subunit Tad2","termid":"PBO:0110162"}


id: PBO:0059875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 12","termid":"PBO:0059875"}


id: GO:0072157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of epithelial cells within a renal tubule that contributes to distal tubule morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration involved in nephron tubule morphogenesis","termid":"GO:0072155"},{"relation_name":"part_of","term_name":"distal tubule morphogenesis","termid":"GO:0072156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell migration involved in distal tubule morphogenesis","termid":"GO:0072157"}


id: PBO:0063387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"programmed cell death 5 pseudogene 1","termid":"PBO:0063387"}


id: GO:0009798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of a pattern along a line or around a point.","definition_xrefs":["GOC:go_curators","GOC:dph","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axis specification","synonyms":[{"name":"axis determination","type":"related"}],"termid":"GO:0009798"}


id: GO:0034946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-isopropylbut-3-enoyl-CoA + H2O = 3-isopropylbut-3-enoic acid + CoASH.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-isopropylbut-3-enoyl-CoA thioesterase activity (obsolete GO:0034946)","termid":"GO:0034946"}


id: PBO:0047458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ficolin 2","termid":"PBO:0047458"}


id: MONDO:0006331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ovarian carcinosarcoma (obsolete MONDO:0006331)","termid":"MONDO:0006331","xrefs":{"Monarch":{"xref_id":"0006331"}}}


id: PBO:0076369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trace amine associated receptor 6","termid":"PBO:0076369"}


id: GO:0110119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of very-low-density lipoprotein particle clearance.","definition_xrefs":["PMID:25510864","GOC:BHF_miRNA","GOC:rph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of very-low-density lipoprotein particle clearance","termid":"GO:0010915"},{"relation_name":"is_a","term_name":"positive regulation of lipoprotein particle clearance","termid":"GO:0010986"},{"relation_name":"positively_regulates","term_name":"very-low-density lipoprotein particle clearance","termid":"GO:0034447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of very-low-density lipoprotein particle clearance","termid":"GO:0110119"}


id: MONDO:0015307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Madras motor neuron disease (MMND) is characterized by weakness and atrophy of limbs, multiple lower cranial nerve palsies and sensorineural hearing loss.","definition_xrefs":["Orphanet:137867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"motor neuron disorder","termid":"MONDO:0020128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"Madras motor neuron disease","secondary_identifiers":["UMLS:C0393551","GARD:19887","MEDGEN:581442","icd11.foundation:1764644031"],"synonyms":[{"name":"MMND","type":"exact"}],"termid":"MONDO:0015307","xrefs":{"Monarch":{"xref_id":"0015307"}}}


id: FYPO:0004876
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) is decreased when the cell is subject to heat shock, at specific genes that are transcriptionally up-regulated during the heat shock.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased chromatin binding","termid":"FYPO:0002577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased chromatin binding at heat-shock-inducible genes during cellular response to heat shock","synonyms":[{"name":"decreased chromatin binding at heat shock inducible genes during cellular response to heat shock","type":"exact"},{"name":"reduced chromatin binding at heat-shock-inducible genes during cellular response to heat shock","type":"exact"}],"termid":"FYPO:0004876"}


id: PBO:0005017
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.56","termid":"PBO:0005017"}


id: MONDO:1010933
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary weakness, stiffness, trembling in cattle in which the cause of the disease in a variation in the MYBPC1 gene.","definition_xrefs":["PMID:26289121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital increased muscular tonus, MYBPC1-related, cattle","secondary_identifiers":["OMIA:001978-9913"],"termid":"MONDO:1010933","xrefs":{"Monarch":{"xref_id":"1010933"}}}


id: MOD:00685
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to L-glutamic acid.","definition_xrefs":["PubMed:957425","PubMed:9192900","PubMed:1881881","PubMed:6692818","PubMed:4922541","RESID:AA0006#GLN","Unimod:7#Q","PubMed:4565668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamic acid residue","termid":"MOD:00015"},{"relation_name":"is_a","term_name":"deamidated residue","termid":"MOD:00400"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deamidated L-glutamine","synonyms":[{"name":"(2S)-2-aminopentanedioic acid","type":"exact"},{"name":"1-aminopropane-1,3-dicarboxylic acid","type":"exact"},{"name":"2-aminoglutaric acid","type":"exact"},{"name":"2-azanylpentanedioic acid","type":"exact"},{"name":"L-glutamic acid","type":"exact"},{"name":"MOD_RES Deamidated glutamine","type":"exact"},{"name":"alpha-aminoglutaric acid","type":"exact"},{"name":"dNGln","type":"exact"},{"name":"glutaminic acid","type":"exact"}],"termid":"MOD:00685"}


id: MONDO:0019113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign paroxysmal torticollis of infancy (BPTI) is a rare functional disorder characterized by recurrent episodes of torticollic posturing of the head (inclination or tilting of the head to one side) in healthy children.","definition_xrefs":["Orphanet:71518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paroxysmal dystonia","termid":"MONDO:0016058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"benign paroxysmal torticollis of infancy","secondary_identifiers":["GARD:18913","icd11.foundation:545726308","MEDGEN:782128","UMLS:C3494934","SCTID:719521002"],"termid":"MONDO:0019113","xrefs":{"Monarch":{"xref_id":"0019113"}}}


id: MONDO:0024891
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"meningitis","termid":"MONDO:0021108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-infectious meningitis","secondary_identifiers":["SCTID:230155003","UMLS:C5539586","MEDGEN:1783059"],"synonyms":[{"name":"non-infective meningitis","type":"exact"}],"termid":"MONDO:0024891","xrefs":{"Monarch":{"xref_id":"0024891"}}}


id: PATO:0000313
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000313 color saturation value (obsolete PATO:0000313)","termid":"PATO:0000313"}


id: GO:0016511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete endothelin-converting enzyme activity (obsolete GO:0016511)","synonyms":[{"name":"endothelin-converting enzyme activity","type":"exact"}],"termid":"GO:0016511"}


id: PBO:0005832
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.1.13","termid":"PBO:0005832"}


id: GO:0008979
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the integration of prophage DNA into a target DNA molecule, usually a bacterial chromosome, via a sequence-specific recombination event which involves the formation of an intasome, a DNA-protein-complex designed for site-specific recombination of the phage and host DNA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site-specific recombinase activity","termid":"GO:0009009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"prophage integrase activity","synonyms":[{"name":"integrase activity involved in establishment of integrated proviral latency","type":"exact"}],"termid":"GO:0008979"}


id: GO:0019807
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acyl-L-aspartate + H2O = a fatty acid anion + L-aspartate.","definition_xrefs":["EC:3.5.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"aspartoacylase activity","secondary_identifiers":["Reactome:R-HSA-5691507","RHEA:10872","MetaCyc:ASPARTOACYLASE-RXN"],"synonyms":[{"name":"N-acetylaspartate amidohydrolase activity","type":"related"},{"name":"N-acyl-L-aspartate amidohydrolase activity","type":"related"},{"name":"acetyl-aspartic deaminase activity","type":"related"},{"name":"acylase II","type":"related"},{"name":"aminoacylase II activity","type":"related"}],"termid":"GO:0019807"}


id: MONDO:0004657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chorioretinitis","termid":"MONDO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"disseminated chorioretinitis","secondary_identifiers":["ICD9:363.1","MEDGEN:509696","DOID:8787","SCTID:78769001","ICD9:363.10","UMLS:C0154879"],"termid":"MONDO:0004657","xrefs":{"Monarch":{"xref_id":"0004657"}}}


id: PBO:0089157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"traub family protein involved in ribosome biogenesis","termid":"PBO:0089157"}


id: PBO:0067632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 804, pseudogene","termid":"PBO:0067632"}


id: PBO:0057083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 181b-2","termid":"PBO:0057083"}


id: PBO:0067288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 371, pseudogene","termid":"PBO:0067288"}


id: GO:0019767
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an immunoglobulin of the IgE isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["ISBN:0781735149","GOC:signaling","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin receptor activity","termid":"GO:0019763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"IgE receptor activity","termid":"GO:0019767"}


id: PBO:0041499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 open reading frame 71","termid":"PBO:0041499"}


id: PBO:0041871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium sensing receptor","termid":"PBO:0041871"}


id: MONDO:0006640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Excess production of adrenal cortex hormones.","definition_xrefs":["MESH:D000308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal cortex disorder","termid":"MONDO:0002816"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenal gland hyperfunction","secondary_identifiers":["SCTID:275437005","DOID:3947","HP:0003118","MEDGEN:7899","EFO:1000797","ICD9:255.3","UMLS:C0001622"],"synonyms":[{"name":"adrenal gland hyperfunction","type":"exact"},{"name":"adrenocortical hyperfunction","type":"exact"},{"name":"disorder of corticoadrenal overactivity","type":"related"},{"name":"hyperadrenalism","type":"exact"},{"name":"hyperadrenocorticism","type":"related"},{"name":"hypercorticism","type":"related"},{"name":"hypercortisolemia","type":"exact"},{"name":"hypercortisolism","type":"exact"},{"name":"hyperfunction, adrenal gland","type":"related"},{"name":"hyperfunction, adrenocortical","type":"related"}],"termid":"MONDO:0006640","xrefs":{"Monarch":{"xref_id":"0006640"}}}


id: GO:0075119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont activates, maintains or increases the frequency, rate or extent of the host G protein-coupled receptor signal transduction. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host G protein-coupled receptor signal transduction (obsolete GO:0075119)","synonyms":[{"name":"positive regulation by symbiont of host G protein-coupled receptor signal transduction","type":"exact"},{"name":"positive regulation by symbiont of host G-protein coupled receptor protein signal transduction","type":"exact"},{"name":"positive regulation by symbiont of host signal transduction mediated by G-protein alpha subunit","type":"narrow"},{"name":"positive regulation by symbiont of host signal transduction mediated by G-protein beta subunit","type":"narrow"},{"name":"positive regulation by symbiont of host signal transduction mediated by G-protein gamma subunit","type":"narrow"}],"termid":"GO:0075119"}


id: PBO:0028790
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_methylation_at_centromere_outer_repeat","termid":"PBO:0028790"}


id: GO:1900693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of (+)-kotanin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of (+)-kotanin biosynthetic process","termid":"GO:1900692"},{"relation_name":"negatively_regulates","term_name":"(+)-kotanin biosynthetic process","termid":"GO:1900596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of (+)-kotanin biosynthetic process","synonyms":[{"name":"down regulation of (+)-kotanin anabolism","type":"exact"},{"name":"down regulation of (+)-kotanin biosynthesis","type":"exact"},{"name":"down regulation of (+)-kotanin biosynthetic process","type":"exact"},{"name":"down regulation of (+)-kotanin formation","type":"exact"},{"name":"down regulation of (+)-kotanin synthesis","type":"exact"},{"name":"down-regulation of (+)-kotanin anabolism","type":"exact"},{"name":"down-regulation of (+)-kotanin biosynthesis","type":"exact"},{"name":"down-regulation of (+)-kotanin biosynthetic process","type":"exact"},{"name":"down-regulation of (+)-kotanin formation","type":"exact"},{"name":"down-regulation of (+)-kotanin synthesis","type":"exact"},{"name":"downregulation of (+)-kotanin anabolism","type":"exact"},{"name":"downregulation of (+)-kotanin biosynthesis","type":"exact"},{"name":"downregulation of (+)-kotanin biosynthetic process","type":"exact"},{"name":"downregulation of (+)-kotanin formation","type":"exact"},{"name":"downregulation of (+)-kotanin synthesis","type":"exact"},{"name":"inhibition of (+)-kotanin anabolism","type":"exact"},{"name":"inhibition of (+)-kotanin biosynthesis","type":"exact"},{"name":"inhibition of (+)-kotanin biosynthetic process","type":"narrow"},{"name":"inhibition of (+)-kotanin formation","type":"exact"},{"name":"inhibition of (+)-kotanin synthesis","type":"exact"},{"name":"negative regulation of (+)-kotanin anabolism","type":"exact"},{"name":"negative regulation of (+)-kotanin biosynthesis","type":"exact"},{"name":"negative regulation of (+)-kotanin formation","type":"exact"},{"name":"negative regulation of (+)-kotanin synthesis","type":"exact"}],"termid":"GO:1900693"}


id: PBO:0044325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 5","termid":"PBO:0044325"}


id: PBO:0073024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCP2D1 antisense RNA 1","termid":"PBO:0073024"}


id: PBO:0001153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium ion/proton antiporter Kha1 (predicted)","termid":"PBO:0001153"}


id: GO:0016541
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Intervening protein sequence excised from a protein precursor in protein splicing; inteins catalyze their own excision and many also possess endonuclease activity.","definition_xrefs":["PMID:8165123","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intein (obsolete GO:0016541)","synonyms":[{"name":"intein","type":"exact"}],"termid":"GO:0016541"}


id: MONDO:0017112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated unilateral hemispheric cerebellar hypoplasia is a rare, non-syndromic cerebellar malformation characterized by loss of volume in the right or left cerebellar hemisphere, with intact vermis and no other neurological anomalies (i.e. normal cerebral hemispheres, fourth ventricle, pons, medulla and midbrain). Patients may be asymptomatic or may present developmental and speech delay, hypotonia, abnormal ocular movements, persistent headaches and/or peripheral vertigo and ataxia. Neurological examination is otherwise normal.","definition_xrefs":["Orphanet:269218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"isolated unilateral hemispheric cerebellar hypoplasia","secondary_identifiers":["icd11.foundation:1960392411","MEDGEN:1638819","SCTID:766934006","UMLS:C4707885","GARD:20995"],"termid":"MONDO:0017112","xrefs":{"Monarch":{"xref_id":"0017112"}}}


id: GO:0047428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H2O + 4-chlorophenylacetonitrile = 4-chlorophenylacetate + NH3.","definition_xrefs":["EC:3.5.5.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrilase activity","termid":"GO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"arylacetonitrilase activity","secondary_identifiers":["RHEA:20657","MetaCyc:3.5.5.5-RXN"],"synonyms":[{"name":"arylacetonitrile aminohydrolase activity","type":"related"}],"termid":"GO:0047428"}


id: PBO:0091248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,3-galactosyltransferase Otg1","termid":"PBO:0091248"}


id: GO:2001248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ammonia assimilation cycle.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nitrogen utilization","termid":"GO:0006808"},{"relation_name":"is_a","term_name":"regulation of glutamate metabolic process","termid":"GO:2000211"},{"relation_name":"regulates","term_name":"ammonia assimilation cycle","termid":"GO:0019676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"regulation of ammonia assimilation cycle","synonyms":[{"name":"regulation of glutamate metabolic process via glutamine and ammonia","type":"exact"},{"name":"regulation of glutamate metabolism via glutamine and ammonia","type":"exact"}],"termid":"GO:2001248"}


id: GO:0005892
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homo- or hetero-pentameric protein complex that forms a transmembrane channel through which ions may pass in response to acetylcholine binding.","definition_xrefs":["GOC:bf","PMID:12381728","GOC:mah","PMID:15579462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion channel complex","termid":"GO:0034702"},{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"acetylcholine-gated channel complex","synonyms":[{"name":"nicotinic acetylcholine receptor","type":"broad"},{"name":"nicotinic acetylcholine-gated receptor-channel complex","type":"exact"}],"termid":"GO:0005892"}


id: MONDO:0019232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"disorder of peptide and amine metabolism","termid":"MONDO:0100473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of peptide metabolism","secondary_identifiers":["Orphanet:79187","UMLS:C4736193","GARD:18963","icd11.foundation:1488430462","MEDGEN:1843166"],"synonyms":[{"name":"disorder of peptide metabolism","type":"related"}],"termid":"MONDO:0019232","xrefs":{"Monarch":{"xref_id":"0019232"}}}


id: PBO:0060227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix remodeling associated 8","termid":"PBO:0060227"}


id: PBO:0029005
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-telophase_nuclear_clustering","termid":"PBO:0029005"}


id: GO:0033833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-hydroxymethylfurfural + NADH + H+ = 2,5-bis-hydroxymethylfuran + NAD+.","definition_xrefs":["GOC:mah","PMID:15338422","GOC:jp","PMID:16652391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"hydroxymethylfurfural reductase (NADH) activity","secondary_identifiers":["MetaCyc:RXN-10738"],"termid":"GO:0033833"}


id: PBO:0061778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occludin/ELL domain containing 1","termid":"PBO:0061778"}


id: PBO:0027547
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_non-fermentable_carbon_source","termid":"PBO:0027547"}


id: MONDO:0015720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Moderately severe hemophilia A is a form of hemophilia A characterized by factor VIII deficiency leading to abnormal bleeding as a result of minor injuries, or following surgery or tooth extraction.","definition_xrefs":["Orphanet:169805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia A","termid":"MONDO:0010602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"moderately severe hemophilia A","secondary_identifiers":["UMLS:C0272323","GARD:17060","MEDGEN:543974"],"synonyms":[{"name":"moderately severe factor VIII deficiency","type":"exact"},{"name":"moderately severe haemophilia type A","type":"exact"},{"name":"moderately severe hemophilia type A","type":"exact"}],"termid":"MONDO:0015720","xrefs":{"Monarch":{"xref_id":"0015720"}}}


id: PBO:0073832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 8","termid":"PBO:0073832"}


id: PBO:0079076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-iMet (anticodon CAT) 1-4","termid":"PBO:0079076"}


id: PBO:0003797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Hhp1","termid":"PBO:0003797"}


id: PBO:0026878
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-binucleate_multiseptate_cell,_septa_grouped","termid":"PBO:0026878"}


id: PBO:0049138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein signaling modulator 2","termid":"PBO:0049138"}


id: PBO:0039089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiotensin II receptor associated protein","termid":"PBO:0039089"}


id: PR:O94640
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sir2 gene.","definition_xrefs":["UniProtKB:O94640","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent histone deacetylase sir2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16D10.07c","synonyms":[{"name":"Spom972h-sir2","type":"exact"},{"name":"regulatory protein sir2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"silent information regulator 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94640"}


id: PBO:0072874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermidine/spermine N1-acetyl transferase like 1","termid":"PBO:0072874"}


id: PBO:0090483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase Vps66","termid":"PBO:0090483"}


id: GO:0015356
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete monocarboxylate (lactate, pyruvate, mevalonate) uptake/efflux porter activity (obsolete GO:0015356)","synonyms":[{"name":"monocarboxylate (lactate, pyruvate, mevalonate) uptake/efflux porter activity","type":"exact"}],"termid":"GO:0015356"}


id: MONDO:0859006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"proximal femoral focal deficiency","secondary_identifiers":["MEDGEN:609280","UMLS:C0431996","Orphanet:633228"],"termid":"MONDO:0859006","xrefs":{"Monarch":{"xref_id":"0859006"}}}


id: GO:0044203
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The fibrous, electron-dense layer lying on the nucleoplasmic side of the inner membrane of a host cell nucleus, composed of lamin filaments.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell nuclear part","termid":"GO:0044094"},{"relation_name":"part_of","term_name":"host cell nuclear inner membrane","termid":"GO:0044201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell nuclear lamina","termid":"GO:0044203"}


id: PBO:0001442
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotonic dystrophy type 2","termid":"PBO:0001442"}


id: GO:0043320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated exocytosis of secretory granules containing preformed mediators such as perforin and granzymes by a natural killer cell.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte degranulation","termid":"GO:0043299"},{"relation_name":"part_of","term_name":"natural killer cell activation involved in immune response","termid":"GO:0002323"},{"relation_name":"part_of","term_name":"natural killer cell mediated cytotoxicity","termid":"GO:0042267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"natural killer cell degranulation","synonyms":[{"name":"NK cell degranulation","type":"exact"},{"name":"NK cell granule exocytosis","type":"exact"},{"name":"natural killer cell granule exocytosis","type":"exact"}],"termid":"GO:0043320"}


id: GO:0008541
data:
  {"annotated_genes":["SJAG_01203","SJAG_04572","SJAG_03733","SJAG_01652","SJAG_03408","SJAG_03321","SJAG_02992","SJAG_02900","SJAG_00738","SJAG_04484","SJAG_04144","SJAG_04211","SJAG_00762"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88332,92488,93643,95884,96585,98306,98448,101150,101605,103852,108796,110720,114652,114760],"is_not":false,"summary":null,"term":"GO:0008541"}]},"cv_name":"cellular_component","definition":"The subcomplex of the proteasome regulatory particle that forms the peripheral lid, which is added on top of the base subcomplex.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"proteasome regulatory particle","termid":"GO:0005838"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00738":null,"SJAG_00762":null,"SJAG_01203":null,"SJAG_01652":null,"SJAG_02900":null,"SJAG_02992":null,"SJAG_03321":null,"SJAG_03408":null,"SJAG_03733":null,"SJAG_04144":null,"SJAG_04211":null,"SJAG_04484":null,"SJAG_04572":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"proteasome regulatory particle, lid subcomplex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0008541","terms_by_termid":{"GO:0008541":null}}


id: GO:0033694
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH group acts as a hydrogen or electron donor and reduces an iron-sulfur protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH group of donors, iron-sulfur protein as acceptor","secondary_identifiers":["EC:1.5.7.-"],"termid":"GO:0033694"}


id: FYPO:0000603
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of G1 phase of a mitotic cell cycle is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G1 phase progression","termid":"FYPO:0000602"},{"relation_name":"is_a","term_name":"decreased duration of mitotic cell cycle phase","termid":"FYPO:0001070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased duration of mitotic G1 phase","synonyms":[{"name":"decreased duration of G1 phase during mitotic cell cycle","type":"exact"},{"name":"decreased duration of mitotic G1 phase during vegetative growth","type":"exact"},{"name":"mitotic cell cycle progression in G1 phase: decreased duration","type":"related"},{"name":"reduced duration of mitotic G1 phase","type":"exact"}],"termid":"FYPO:0000603"}


id: PBO:0070605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 73","termid":"PBO:0070605"}


id: MOD:01965
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 2xC(13),3x(2)H labeled N6-acetyl-L-lysine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acetyl-L-lysine","termid":"MOD:00064"},{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(2)H deuterium tagged reagent","termid":"MOD:01431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"},{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:01875","MOD:00408"],"is_obsolete":false,"name":"2xC(13),3x(2)H labeled N6-acetyl-L-lysine","synonyms":[{"name":"Acetate labeling reagent (K) (heavy form, +5amu)","type":"exact"},{"name":"COFRADIC heavy acetyl 13C2 2H3","type":"exact"}],"termid":"MOD:01965"}


id: PBO:0079887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroplakin 3B pseudogene 1","termid":"PBO:0079887"}


id: GO:0002069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process, independent of morphogenetic (shape) change, that is required for a columna/cuboidal epithelial cell to attain its fully functional state. A columnar/cuboidal epithelial cell is a cell usually found in a two dimensional sheet with a free surface. Columnar/cuboidal epithelial cells take on the shape of a column or cube.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell maturation","termid":"GO:0002070"},{"relation_name":"part_of","term_name":"columnar/cuboidal epithelial cell development","termid":"GO:0002066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"columnar/cuboidal epithelial cell maturation","termid":"GO:0002069"}


id: GO:0036405
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the cell outer membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos","GOC:md"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of cell outer membrane (obsolete GO:0036405)","synonyms":[{"name":"anchored to cell outer membrane","type":"narrow"}],"termid":"GO:0036405"}


id: GO:0001601
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with gut peptide YY to initiate a change in cell activity.","definition_xrefs":["PMID:9315606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide Y receptor activity","termid":"GO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"peptide YY receptor activity","termid":"GO:0001601"}


id: PR:P26359
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- msh3 gene.","definition_xrefs":["UniProtKB:P26359","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA mismatch repair protein msh3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8F11.03","synonyms":[{"name":"MutS protein homolog 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-msh3","type":"exact"},{"name":"mating-type switching protein swi4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P26359"}


id: GO:0090658
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A biochemically and structurally distinct domain of the retinal interphotoreceptor matrix that is specifically associated with cone photoreceptor cell inner and outer segments.","definition_xrefs":["PMID:2055688","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"interphotoreceptor matrix","termid":"GO:0033165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cone matrix sheath","termid":"GO:0090658"}


id: PR:O74400
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein 28 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C4F6.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.14","secondary_identifiers":["UniProtKB:O74400"],"synonyms":[{"name":"Spom972h-RBM28","type":"exact"}],"termid":"PR:O74400"}


id: PBO:0038880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADCY6 divergent transcript","termid":"PBO:0038880"}


id: PBO:0034110
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-existence_starts_at_point","termid":"PBO:0034110"}


id: GO:0071730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the beak. This process pertains to the initial formation of a structure from unspecified parts. The avian beak is an external anatomical structure, in the head region, that is adapted for feeding self and young, catching prey, probing, etc. It encompasses, but is not restricted to, the maxilla, mandible, maxillary rhamphotheca, mandibular rhamphotheca, nostril, nasal fossa, nasal bones, egg tooth and rictus.","definition_xrefs":["GOC:lp","ISBN:0702008729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"beak morphogenesis","termid":"GO:0071729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"beak formation","termid":"GO:0071730"}


id: MONDO:0004372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic polyneuropathy","termid":"MONDO:0003335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"chronic toxic polyneuropathy","secondary_identifiers":["UMLS:C1333048","DOID:7825","MEDGEN:234149","NCIT:C35603"],"synonyms":[{"name":"chronic toxic polyneuropathy","type":"exact"}],"termid":"MONDO:0004372","xrefs":{"Monarch":{"xref_id":"0004372"}}}


id: SO:0002362
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for cytosolic SSU rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_rRNA_gene","termid":"SO:0002360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_SSU_rRNA_gene","synonyms":[{"name":"cytosolic small subunit rRNA gene","type":"exact"}],"termid":"SO:0002362"}


id: GO:0072668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a tubulin complex. Includes the synthesis and folding of the constituent protein molecules, and those protein modifications that are involved in synthesis or assembly of the complex. A tubulin complex is a heterodimer of tubulins alpha and beta, from which microtubules are assembled.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete tubulin complex biogenesis (obsolete GO:0072668)","synonyms":[{"name":"tubulin complex biogenesis","type":"exact"}],"termid":"GO:0072668"}


id: PBO:0074644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 36A","termid":"PBO:0074644"}


id: PBO:0079767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin fold modifier 1","termid":"PBO:0079767"}


id: FYPO:0006569
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which DNA repair is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"},{"relation_name":"is_a","term_name":"normal cellular response to stress during vegetative growth","termid":"FYPO:0000968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000298","FYPO:0000257"],"is_obsolete":false,"name":"normal DNA repair","synonyms":[{"name":"normal DNA repair during mitotic cell cycle","type":"related"},{"name":"normal DNA repair during vegetative growth","type":"exact"}],"termid":"FYPO:0006569"}


id: SO:0002248
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of DNA that is predicted to be translated and transcribed into a protein by a protein detection algorithm that does not get transcribed in nature.","definition_xrefs":["PMID:21771858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spurious_protein","synonyms":[{"name":"spurious protein","type":"exact"}],"termid":"SO:0002248"}


id: MONDO:0005684
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of paralytic poliomyelitis affecting neurons of the medulla oblongata of the brain stem. Clinical features include impaired respiration, hypertension, alterations of vasomotor control, and dysphagia. Weakness and atrophy of the limbs and trunk due to spinal cord involvement is usually associated. (From Adams et al., Principles of Neurology, 6th ed, p765)","definition_xrefs":["MESH:D011052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paralytic poliomyelitis","termid":"MONDO:0000341"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"bulbar polio","secondary_identifiers":["DOID:9786","MEDGEN:45982","ICD9:045.0","UMLS:C0032372"],"synonyms":[{"name":"bulbar polio","type":"exact"},{"name":"bulbar poliomyelitis","type":"exact"},{"name":"medullary involvement poliomyelitis","type":"related"},{"name":"polio, bulbar","type":"related"},{"name":"poliomyelitis, medullary involvement","type":"related"}],"termid":"MONDO:0005684","xrefs":{"Monarch":{"xref_id":"0005684"}}}


id: PBO:0077068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THUMPD3 antisense RNA 1","termid":"PBO:0077068"}


id: PBO:0043672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronin 1A","termid":"PBO:0043672"}


id: MONDO:0013200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in which the cause of the disease is a mutation in the VCL gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy 15","secondary_identifiers":["UMLS:C2750459","MESH:C567681","DOID:0110321","OMIM:613255","MEDGEN:413312"],"synonyms":[{"name":"CMH15","type":"exact"},{"name":"VCL hypertrophic cardiomyopathy","type":"exact"},{"name":"cardiomyopathy familial hypertrophic 15","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 15","type":"related"},{"name":"cardiomyopathy, familial hypertrophic, type 15","type":"exact"},{"name":"cardiomyopathy, hypertrophic, 15","type":"exact"},{"name":"hypertrophic cardiomyopathy caused by mutation in VCL","type":"exact"},{"name":"hypertrophic cardiomyopathy type 15","type":"exact"}],"termid":"MONDO:0013200","xrefs":{"Monarch":{"xref_id":"0013200"}}}


id: PBO:0027218
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cytosolic_half-mer_polysome_level","termid":"PBO:0027218"}


id: FYPO:0003895
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of rotenone than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0002682","FYPO:0005447"],"is_obsolete":false,"name":"resistance to rotenone","synonyms":[{"name":"resistance to rotenone during mitotic cell cycle","type":"related"},{"name":"resistance to rotenone during vegetative growth","type":"exact"},{"name":"resistant to rotenone","type":"exact"}],"termid":"FYPO:0003895"}


id: PBO:0087287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Signal transducing MEK kinase; involved in pheromone response and pseudohyphal/invasive growth pathways where it phosphorylates Ste7p, and the high osmolarity response pathway, via phosphorylation of Pbs2p; regulated by Ste20p and Ste50p; protein abundance increases in response to DNA replication stress","termid":"PBO:0087287"}


id: MONDO:0011231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"febrile seizures, familial","termid":"MONDO:0000032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"febrile seizures, familial, 2","secondary_identifiers":["MEDGEN:355446","DOID:0111310","MESH:C566541","UMLS:C1865342"],"synonyms":[{"name":"FEB2","type":"exact"},{"name":"convulsions, familial febrile, 2","type":"related"},{"name":"febrile seizures, familial, 2","type":"exact"},{"name":"generalised epilepsy with febrile seizures plus, type 11","type":"exact"},{"name":"generalized epilepsy with febrile seizures plus, type 11","type":"exact"}],"termid":"MONDO:0011231","xrefs":{"Monarch":{"xref_id":"0011231"}}}


id: PBO:0036450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein with a role in ER delivery of tail-anchored membrane proteins (predicted)","termid":"PBO:0036450"}


id: PBO:0081281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 56, pseudogene","termid":"PBO:0081281"}


id: GO:0031486
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myosin complex containing a class XVI myosin heavy chains and associated light chains; myosin XVI heavy chains contain ankyrin repeat.","definition_xrefs":["PMID:11294886","PMID:32451869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0005575","GO:0015629","GO:0032991"],"is_obsolete":false,"name":"myosin XVI complex","termid":"GO:0031486"}


id: MONDO:0011250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly, macrotia, and intellectual disability","secondary_identifiers":["OMIM:602555","UMLS:C1865204","MESH:C566525","MEDGEN:355403"],"synonyms":[{"name":"microcephaly, macrotia, and intellectual disability","type":"exact"},{"name":"microcephaly, macrotia, and mental retardation","type":"exact"}],"termid":"MONDO:0011250","xrefs":{"Monarch":{"xref_id":"0011250"}}}


id: PBO:0087347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sphingoid long-chain base (LCB) efflux transporter; integral membrane transporter that localizes to the plasma membrane and may transport long chain bases (LCBs) from the cytoplasmic side toward the extracytoplasmic side of the membrane; role in glycerophospholipid translocation; suppressor of the sphingoid LCB sensitivity of an LCB-lyase mutation","termid":"PBO:0087347"}


id: MONDO:0005528
data:
  {"annotated_genes":["SJAG_04459","SJAG_04425","SJAG_01199","SJAG_01881","SJAG_04042","SJAG_03069","SJAG_05230"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015005"},{"annotations":[85767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009666"},{"annotations":[84736,84735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009354"},{"annotations":[85347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009609"},{"annotations":[86167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010184"},{"annotations":[84986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012407"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of vitamin metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"vitamin deficiency disorder","termid":"MONDO:0024298"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01199":null,"SJAG_01881":null,"SJAG_03069":null,"SJAG_04042":null,"SJAG_04425":null,"SJAG_04459":null,"SJAG_05230":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inborn vitamin metabolic disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0005596","DOID:0050718"],"synonyms":[{"name":"inborn error of vitamin metabolic process","type":"exact"},{"name":"inborn vitamin metabolic process disorder","type":"exact"},{"name":"rare inborn error of vitamin metabolic process","type":"exact"},{"name":"vitamin metabolic disorder","type":"related"}],"termid":"MONDO:0005528","terms_by_termid":{"MONDO:0009354":null,"MONDO:0009609":null,"MONDO:0009666":null,"MONDO:0010184":null,"MONDO:0012407":null,"MONDO:0015005":null},"xrefs":{"Monarch":{"xref_id":"0005528"}}}


id: PBO:0067204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 269, pseudogene","termid":"PBO:0067204"}


id: GO:0002526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Inflammation which comprises a rapid, short-lived, relatively uniform response to acute injury or antigenic challenge and is characterized by accumulations of fluid, plasma proteins, and granulocytic leukocytes. An acute inflammatory response occurs within a matter of minutes or hours, and either resolves within a few days or becomes a chronic inflammatory response.","definition_xrefs":["GOC:add","ISBN:0781735149","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory response","termid":"GO:0006954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acute inflammatory response","termid":"GO:0002526"}


id: PR:O74445
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S protease regulatory subunit S10B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04299","PANTHER:PTHR23073:SF10","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S protease subunit rpt4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.16","secondary_identifiers":["UniProtKB:O74445"],"synonyms":[{"name":"Spom972h-PSMC6","type":"exact"}],"termid":"PR:O74445"}


id: PBO:0026765
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_tRNA_wobble_position_uridine_thiolation","termid":"PBO:0026765"}


id: PBO:0080903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon pseudogene 3","termid":"PBO:0080903"}


id: FYPO:0005555
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cohesin loading is decreased during the mitotic cell cycle. Cohesin loading is the topological linking of a cohesin ring complex to chromatin.","definition_xrefs":["GO:0061780","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of molecular function","termid":"FYPO:0000682"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"},{"relation_name":"is_a","term_name":"abnormal cohesin loading","termid":"FYPO:0006479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000641","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased mitotic cohesin loading","synonyms":[{"name":"decreased cohesin loading during mitotic cell cycle","type":"exact"},{"name":"decreased cohesin loading during vegetative growth","type":"exact"},{"name":"decreased mitotic cohesin association with chromatin","type":"exact"},{"name":"decreased mitotic cohesin localization to chromatin","type":"exact"},{"name":"reduced mitotic cohesin loading","type":"exact"}],"termid":"FYPO:0005555"}


id: MONDO:0009148
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare congenital ectodermal dysplasia syndrome with a range of signs and symptoms including cleft lip or palate, mental retardation and various forms of ectodermal dysplasia. Additional symptoms may include fused eyelids, absent nails, delayed bone growth and dry skin. It is believed that this syndrome follows an autosomal dominant pattern of inheritance with incomplete penetrance, and caused by a mutation affecting the TP63 gene","definition_xrefs":["Wikipedia:Rosselli%E2%80%93Gulienetti_syndrome"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ankyloblepharon-ectodermal defects-cleft lip/palate syndrome","termid":"MONDO:0007124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005093"],"is_obsolete":false,"name":"Rosselli-Gulienetti syndrome","secondary_identifiers":["Orphanet:90339","MEDGEN:163221","icd11.foundation:1430451924","OMIM:225000","UMLS:C0796139","MESH:C563117"],"synonyms":[{"name":"Rosselli-Gulienetti syndrome","type":"exact"}],"termid":"MONDO:0009148","xrefs":{"Monarch":{"xref_id":"0009148"}}}


id: PBO:0057077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR155 host gene","termid":"PBO:0057077"}


id: GO:0141141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont avoids recognition by host's innate immune response by altering or concealing a conserved molecule recognized by the host's cell surface and intracellular pattern recognition receptors, including Toll-like and NOD-like receptors. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:17215377","PMID:26502908","PMID:29101229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated evasion of host innate immune response","termid":"GO:0141043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated evasion of recognition by host pattern recognition receptor","synonyms":[{"name":"evasion of symbiont recognition by host pattern recognition receptor","type":"exact"}],"termid":"GO:0141141"}


id: GO:0106376
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxyphytanoyl-CoA = 2,6,10,14-tetramethylpentadecanal + formyl-CoA.","definition_xrefs":["PMID:10468558","RHEA:25355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-hydroxyacyl-CoA lyase activity","termid":"GO:0106359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"2-hydroxyphytanoyl-CoA lyase activity","termid":"GO:0106376"}


id: PBO:0081305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 90","termid":"PBO:0081305"}


id: FYPO:0005899
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actin filament-based movement is normal (i.e. indistinguishable from wild type). Actin filament-based movement is the movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins.","definition_xrefs":["GO:0030048","PMID:19570908","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cytoskeleton organization","termid":"FYPO:0001366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal rate of actin filament-based movement","synonyms":[{"name":"normal rate of actin filament-based movement during mitotic cell cycle","type":"related"},{"name":"normal rate of actin filament-based movement during vegetative growth","type":"exact"}],"termid":"FYPO:0005899"}


id: PBO:0072509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 38","termid":"PBO:0072509"}


id: PBO:0067526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 670, pseudogene","termid":"PBO:0067526"}


id: MONDO:0016813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete microsporidiosis (obsolete MONDO:0016813)","termid":"MONDO:0016813","xrefs":{"Monarch":{"xref_id":"0016813"}}}


id: GO:0050930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of positive chemotaxis","termid":"GO:0050927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induction of positive chemotaxis","termid":"GO:0050930"}


id: PBO:0109143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane integral protein involved in protein targeting to mitochondrion Ema19","termid":"PBO:0109143"}


id: PBO:0001190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bouquet formation protein Bqt2","termid":"PBO:0001190"}


id: GO:1905068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of canonical Wnt signaling pathway involved in heart development.","definition_xrefs":["GOC:BHF","GO_REF:0000058","GOC:bc","GOC:BHF_miRNA","GOC:TermGenie","PMID:25034767"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of canonical Wnt signaling pathway involved in heart development (obsolete GO:1905068)","synonyms":[{"name":"activation of canonical Wnt receptor signaling pathway involved in heart development","type":"narrow"},{"name":"activation of canonical Wnt receptor signalling pathway involved in heart development","type":"narrow"},{"name":"activation of canonical Wnt signaling pathway involved in heart development","type":"narrow"},{"name":"activation of canonical Wnt-activated signaling pathway involved in heart development","type":"narrow"},{"name":"positive regulation of canonical Wnt receptor signaling pathway involved in heart development","type":"exact"},{"name":"positive regulation of canonical Wnt receptor signalling pathway involved in heart development","type":"exact"},{"name":"positive regulation of canonical Wnt-activated signaling pathway involved in heart development","type":"exact"},{"name":"up regulation of canonical Wnt receptor signaling pathway involved in heart development","type":"exact"},{"name":"up regulation of canonical Wnt receptor signalling pathway involved in heart development","type":"exact"},{"name":"up regulation of canonical Wnt signaling pathway involved in heart development","type":"exact"},{"name":"up regulation of canonical Wnt-activated signaling pathway involved in heart development","type":"exact"},{"name":"up-regulation of canonical Wnt receptor signaling pathway involved in heart development","type":"exact"},{"name":"up-regulation of canonical Wnt receptor signalling pathway involved in heart development","type":"exact"},{"name":"up-regulation of canonical Wnt signaling pathway involved in heart development","type":"exact"},{"name":"up-regulation of canonical Wnt-activated signaling pathway involved in heart development","type":"exact"},{"name":"upregulation of canonical Wnt receptor signaling pathway involved in heart development","type":"exact"},{"name":"upregulation of canonical Wnt receptor signalling pathway involved in heart development","type":"exact"},{"name":"upregulation of canonical Wnt signaling pathway involved in heart development","type":"exact"},{"name":"upregulation of canonical Wnt-activated signaling pathway involved in heart development","type":"exact"}],"termid":"GO:1905068"}


id: MONDO:0000954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer involving a Meckel's diverticulum.","definition_xrefs":["MONDO:patterns/cancer"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ileum cancer","termid":"MONDO:0000955"},{"relation_name":"is_a","term_name":"Meckel diverticulum neoplasm","termid":"MONDO:0021082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"Meckel diverticulum cancer","secondary_identifiers":["DOID:10152","UMLS:C0153429","ICD9:152.3","MEDGEN:509288","SCTID:187752007"],"synonyms":[{"name":"Meckel diverticulum cancer","type":"exact"},{"name":"Meckel's diverticulum cancer","type":"exact"},{"name":"cancer of Meckel's diverticulum","type":"exact"},{"name":"malignant Meckel's diverticulum neoplasm","type":"exact"},{"name":"malignant neoplasm of Meckel's diverticulum","type":"exact"}],"termid":"MONDO:0000954","xrefs":{"Monarch":{"xref_id":"0000954"}}}


id: GO:0006224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete uridine kinase reaction (obsolete GO:0006224)","synonyms":[{"name":"uridine kinase reaction","type":"exact"}],"termid":"GO:0006224"}


id: GO:0097591
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Fibrillar repetitive structure surrounding the ventral disc edge in Giardia species (trophozoite stage). The composition of the lateral crest is not fully known yet.","definition_xrefs":["GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"ventral disc","termid":"GO:0097597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ventral disc lateral crest","synonyms":[{"name":"lateral crest","type":"broad"},{"name":"ventral disk lateral crest","type":"related"}],"termid":"GO:0097591"}


id: PBO:0076909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor A, mitochondrial pseudogene 1","termid":"PBO:0076909"}


id: PBO:0073687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIVA1 apoptosis inducing factor","termid":"PBO:0073687"}


id: MONDO:0100349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Mendelian disease characterized by infantile ataxia with hypo/aplastic vermis, hepatic fibrocirrhosis, slender-shaped skeleton, peculiar face, and moderate intellectual disability.","definition_xrefs":["PMID:2929661"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete hereditary parenchymatous liver disease (obsolete MONDO:0015508)","termid":"MONDO:0015508"},{"relation_name":"is_a","term_name":"Joubert syndrome and related disorders","termid":"MONDO:0015369"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"COACH syndrome","secondary_identifiers":["SCTID:721847002","DOID:0111589","Orphanet:1454","UMLS:C1857662","GARD:1410","MEDGEN:387879","MESH:C536430"],"synonyms":[{"name":"JS-H","type":"exact"},{"name":"Joubert syndrome with congenital hepatic fibrosis","type":"exact"},{"name":"Joubert syndrome with hepatic defect","type":"exact"},{"name":"cerebellar vermis hypo/aplasia, oligophrenia, ataxia congenital, coloboma, and hepatic fibrosis","type":"related"},{"name":"cerebellar vermis hypoplasia-oligophrenia-congenital ataxia-coloboma-hepatic fibrosis","type":"exact"},{"name":"gentile syndrome","type":"exact"}],"termid":"MONDO:0100349","xrefs":{"Monarch":{"xref_id":"0100349"}}}


id: GO:0045856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the process in which oskar mRNA is transported to, or maintained in, the oocyte pole plasm.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pole plasm oskar mRNA localization","termid":"GO:0007317"},{"relation_name":"is_a","term_name":"positive regulation of intracellular mRNA localization","termid":"GO:1904582"},{"relation_name":"positively_regulates","term_name":"pole plasm oskar mRNA localization","termid":"GO:0045451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pole plasm oskar mRNA localization","synonyms":[{"name":"activation of pole plasm oskar mRNA localization","type":"narrow"},{"name":"positive regulation of oocyte pole plasm oskar mRNA localization","type":"exact"},{"name":"positive regulation of pole plasm oskar mRNA localisation","type":"exact"},{"name":"stimulation of pole plasm oskar mRNA localization","type":"narrow"},{"name":"up regulation of pole plasm oskar mRNA localization","type":"exact"},{"name":"up-regulation of pole plasm oskar mRNA localization","type":"exact"},{"name":"upregulation of pole plasm oskar mRNA localization","type":"exact"}],"termid":"GO:0045856"}


id: SO:0001870
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A short ncRNA that is transcribed from an enhancer. May have a regulatory function.","definition_xrefs":["SO:cjm","doi:10.1038/465173a"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"},{"relation_name":"transcribed_from","term_name":"enhancer","termid":"SO:0000165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancerRNA","synonyms":[{"name":"eRNA","type":"exact"}],"termid":"SO:0001870"}


id: PR:Q9US40
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1039.01 gene.","definition_xrefs":["UniProtKB:Q9US40","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized amino-acid permease C1039.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1039.01","synonyms":[{"name":"Spom972h-SPAC1039.01","type":"exact"}],"termid":"PR:Q9US40"}


id: SO:0000736
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence of DNA that originates from a an organelle.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_location","termid":"SO:0000735"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"organelle_sequence","synonyms":[{"name":"organelle sequence","type":"exact"}],"termid":"SO:0000736"}


id: MONDO:0042976
data:
  {"annotated_genes":["SJAG_04425","SJAG_04459","SJAG_04042","SJAG_01199"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84735,84736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009354"},{"annotations":[85347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009609"},{"annotations":[86167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010184"}]},"cv_name":"mondo","definition":"A condition due to deficiency in any member of the vitamin B complex. These B vitamins are water-soluble and must be obtained from the diet because they are easily lost in the urine. Unlike the lipid-soluble vitamins, they cannot be stored in the body fat.","definition_xrefs":["MESH:D014804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin deficiency disorder","termid":"MONDO:0024298"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01199":null,"SJAG_04042":null,"SJAG_04425":null,"SJAG_04459":null},"genotype_count":0,"is_obsolete":false,"name":"vitamin B deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C35129","MEDGEN:22669","SCTID:47903000","UMLS:C0042850"],"synonyms":[{"name":"deficiencies, vitamin B","type":"related"},{"name":"deficiency, vitamin B","type":"related"},{"name":"vitamin B deficiencies","type":"related"}],"termid":"MONDO:0042976","terms_by_termid":{"MONDO:0009354":null,"MONDO:0009609":null,"MONDO:0010184":null},"xrefs":{"Monarch":{"xref_id":"0042976"}}}


id: GO:0032816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of natural killer cell activation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of natural killer cell activation","termid":"GO:0032814"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte activation","termid":"GO:0051251"},{"relation_name":"positively_regulates","term_name":"natural killer cell activation","termid":"GO:0030101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell activation","synonyms":[{"name":"activation of natural killer cell activation","type":"narrow"},{"name":"positive regulation of NK cell activation","type":"exact"},{"name":"stimulation of natural killer cell activation","type":"narrow"},{"name":"up regulation of natural killer cell activation","type":"exact"},{"name":"up-regulation of natural killer cell activation","type":"exact"},{"name":"upregulation of natural killer cell activation","type":"exact"}],"termid":"GO:0032816"}


id: MONDO:0030458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease","termid":"MONDO:0015626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease, axonal, Type 2HH","secondary_identifiers":["UMLS:C5562003","OMIM:619574","MEDGEN:1794213"],"synonyms":[{"name":"CMT2HH","type":"exact"}],"termid":"MONDO:0030458","xrefs":{"Monarch":{"xref_id":"0030458"}}}


id: FYPO:0008320
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cell morphology (i.e. the size, shape, or structure of the cell) is altered when the cell is subject to sulfur deprivation.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell morphology","termid":"FYPO:0000005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell morphology during sulphur deprivation","termid":"FYPO:0008320"}


id: PBO:0088316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved membrane protein with Rossmann-like alpha/beta/alpha sandwich fold, conserved in fungi and protozoa","termid":"PBO:0088316"}


id: PR:Q9Y7Q6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- set7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7Q6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain-containing protein 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC297.04c","synonyms":[{"name":"Spom972h-set7","type":"exact"}],"termid":"PR:Q9Y7Q6"}


id: MONDO:0001004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pneumoconiosis caused by exposure to slate dust.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumoconiosis","termid":"MONDO:0015926"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"slate pneumoconiosis","secondary_identifiers":["ICD9:502","DOID:10330","NCIT:C35397","SCTID:1259003","UMLS:C0340186","MEDGEN:83300"],"synonyms":[{"name":"Schistosis","type":"exact"}],"termid":"MONDO:0001004","xrefs":{"Monarch":{"xref_id":"0001004"}}}


id: PR:P05733
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3702 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P05733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L37-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1223.05c","synonyms":[{"name":"L37-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpl3702","type":"exact"},{"name":"YL27 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P05733"}


id: MONDO:0009951
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiculoneuropathy, fatal neonatal","secondary_identifiers":["MEDGEN:376592","OMIM:266250","MESH:C564857","UMLS:C1849471"],"synonyms":[{"name":"Radiculoneuropathy, fatal neonatal","type":"exact"}],"termid":"MONDO:0009951","xrefs":{"Monarch":{"xref_id":"0009951"}}}


id: PBO:0060977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroguidin","termid":"PBO:0060977"}


id: GO:0099130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an estrogen.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"estrogen binding","termid":"GO:0099130"}


id: GO:1904352
data:
  {"annotated_genes":["SJAG_04990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98894],"is_not":false,"summary":null,"term":"GO:1904352"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein catabolic process in the vacuole.","definition_xrefs":["PMID:25635054","GOC:rl","GOC:TermGenie","GOC:BHF","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein catabolic process","termid":"GO:0045732"},{"relation_name":"is_a","term_name":"regulation of protein catabolic process in the vacuole","termid":"GO:1904350"},{"relation_name":"positively_regulates","term_name":"protein catabolic process in the vacuole","termid":"GO:0007039"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0030163"},{"rel_name":"regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein catabolic process in the vacuole","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein catabolic process in the vacuole","type":"narrow"},{"name":"activation of vacuolar protein breakdown","type":"related"},{"name":"activation of vacuolar protein catabolic process","type":"related"},{"name":"activation of vacuolar protein catabolism","type":"related"},{"name":"activation of vacuolar protein degradation","type":"related"},{"name":"positive regulation of vacuolar protein breakdown","type":"related"},{"name":"positive regulation of vacuolar protein catabolic process","type":"related"},{"name":"positive regulation of vacuolar protein catabolism","type":"related"},{"name":"positive regulation of vacuolar protein degradation","type":"related"},{"name":"up regulation of protein catabolic process in the vacuole","type":"exact"},{"name":"up regulation of vacuolar protein breakdown","type":"related"},{"name":"up regulation of vacuolar protein catabolic process","type":"related"},{"name":"up regulation of vacuolar protein catabolism","type":"related"},{"name":"up regulation of vacuolar protein degradation","type":"related"},{"name":"up-regulation of protein catabolic process in the vacuole","type":"exact"},{"name":"up-regulation of vacuolar protein breakdown","type":"related"},{"name":"up-regulation of vacuolar protein catabolic process","type":"related"},{"name":"up-regulation of vacuolar protein catabolism","type":"related"},{"name":"up-regulation of vacuolar protein degradation","type":"related"},{"name":"upregulation of protein catabolic process in the vacuole","type":"exact"},{"name":"upregulation of vacuolar protein breakdown","type":"related"},{"name":"upregulation of vacuolar protein catabolic process","type":"related"},{"name":"upregulation of vacuolar protein catabolism","type":"related"},{"name":"upregulation of vacuolar protein degradation","type":"related"}],"termid":"GO:1904352","terms_by_termid":{"GO:1904352":null}}


id: MONDO:0008520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachydactyly-elbow wrist dysplasia syndrome is a rare, genetic bone development disorder characterized by dysplasia of all the bony components of the elbow joint, abnormally shaped carpal bones, wrist joint radial deviation and brachydactyly. Patients typically present with slight flexion at the elbow joints (with impossibility to perform active extension) and usually associate a limited range of motion of the elbow, wrist and finger articulations. Camptodactyly and syndactyly have also been reported.","definition_xrefs":["Orphanet:1275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone development disease","termid":"MONDO:0005497"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"brachydactyly-elbow wrist dysplasia syndrome","secondary_identifiers":["MESH:C566090","GARD:966","MEDGEN:396103","OMIM:186550","UMLS:C1861313","SCTID:764437006"],"synonyms":[{"name":"LBNBG","type":"related"},{"name":"LIEBENBERG syndrome","type":"related"},{"name":"Liebenberg syndrome","type":"exact"},{"name":"brachydactyly elbow wrist dysplasia","type":"related"},{"name":"brachydactyly with Joint dysplasia","type":"related"},{"name":"brachydactyly with joint dysplasia","type":"related"},{"name":"brachydactyly-joint dysplasia syndrome","type":"exact"},{"name":"carpal synostosis with dysplastic elbow joints and brachydactyly","type":"related"},{"name":"synostosis, carpal, with dysplastic elbow joints and brachydactyly","type":"related"}],"termid":"MONDO:0008520","xrefs":{"Monarch":{"xref_id":"0008520"}}}


id: GO:0031213
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ISWI complex that contains an ATPase subunit of the ISWI family (SNF2H in mammals) and an RSF1 homolog. It mediates nucleosome deposition and generates regularly spaced nucleosome arrays. In mammals, RSF is involved in regulation of transcription from RNA polymerase II promoters).","definition_xrefs":["GOC:krc","PMID:15284901","PMID:16568949","PMID:12972596","PMID:21810179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ISWI-type complex","termid":"GO:0031010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"RSF complex","synonyms":[{"name":"remodeling and spacing factor complex","type":"exact"}],"termid":"GO:0031213"}


id: PBO:0079068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 3-2","termid":"PBO:0079068"}


id: GO:0045959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of complement activation by the classical pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of humoral immune response mediated by circulating immunoglobulin","termid":"GO:0002924"},{"relation_name":"is_a","term_name":"regulation of complement activation, classical pathway","termid":"GO:0030450"},{"relation_name":"is_a","term_name":"negative regulation of complement activation","termid":"GO:0045916"},{"relation_name":"negatively_regulates","term_name":"complement activation, classical pathway","termid":"GO:0006958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of complement activation, classical pathway","synonyms":[{"name":"down regulation of complement activation, classical pathway","type":"exact"},{"name":"down-regulation of complement activation, classical pathway","type":"exact"},{"name":"downregulation of complement activation, classical pathway","type":"exact"},{"name":"inhibition of complement activation, classical pathway","type":"narrow"},{"name":"negative regulation of complement cascade, classical pathway","type":"exact"}],"termid":"GO:0045959"}


id: GO:1901259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any rRNA processing that takes place in chloroplast.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0010467","GO:0042254"],"is_obsolete":false,"name":"chloroplast rRNA processing","termid":"GO:1901259"}


id: PR:000036299
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonucleoside-diphosphate reductase small chain that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PomBase:MAH","PMID:20516199","PRO:DAN","PMID:12867051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside-diphosphate reductase small chain","termid":"PR:000027713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleoside-diphosphate reductase small chain (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC25D12.04","synonyms":[{"name":"SPBC25D12.04","type":"related"},{"name":"SUC22","type":"related"},{"name":"Spom-suc22","type":"exact"}],"termid":"PR:000036299"}


id: FYPO:0002968
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is normal (i.e. indistinguishable from wild type) during G2 phase of the cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to mitotic spindle pole body during interphase","termid":"FYPO:0003308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to mitotic spindle pole body during G2","synonyms":[{"name":"normal protein localisation to mitotic spindle pole body during G2","type":"exact"},{"name":"normal protein localization to mitotic SPB during G2","type":"exact"},{"name":"normal protein localization to spindle pole body during G2 during mitotic cell cycle","type":"related"},{"name":"normal protein localization to spindle pole body during G2 vegetative growth","type":"exact"}],"termid":"FYPO:0002968"}


id: PBO:0024811
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causal_relation_between_material_entity_and_a_process","termid":"PBO:0024811"}


id: PBO:0004151
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Xeroderma pigmentosum","termid":"PBO:0004151"}


id: PBO:0086067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that interacts with Ulp1p; a Ubl (ubiquitin-like protein)-specific protease for Smt3p protein conjugates","termid":"PBO:0086067"}


id: PBO:0072664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon 4 interacting protein 1","termid":"PBO:0072664"}


id: SO:0000356
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence consisting of nucleobases bound to a repeating unit made of a D-ribose ring connected to a phosphate backbone.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic_acid","termid":"SO:0000348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA","termid":"SO:0000356"}


id: GO:2000802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endocardial cushion to mesenchymal transition involved in heart valve formation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endocardial cushion to mesenchymal transition","termid":"GO:0140051"},{"relation_name":"is_a","term_name":"regulation of endocardial cushion to mesenchymal transition involved in heart valve formation","termid":"GO:2000800"},{"relation_name":"positively_regulates","term_name":"endocardial cushion to mesenchymal transition involved in heart valve formation","termid":"GO:0003199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endocardial cushion to mesenchymal transition involved in heart valve formation","synonyms":[{"name":"positive regulation of endocardial cushion to mesenchymal transition involved in valve formation","type":"exact"}],"termid":"GO:2000802"}


id: PBO:0075931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST14 transmembrane serine protease matriptase","termid":"PBO:0075931"}


id: MOD:01617
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-(6-phosphomannosyl)-L-threonine.","definition_xrefs":["PubMed:20044576","RESID:AA0514"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-threonine","termid":"MOD:00005"},{"relation_name":"is_a","term_name":"mannosylated residue","termid":"MOD:00595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-(6-phosphomannosyl)-L-threonine","synonyms":[{"name":"(2S,3R)-2-amino-3-[6-phosphonooxy-alpha-D-mannopyranosyloxy]butanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (Man6P) threonine","type":"exact"},{"name":"O-(6-phosphomannosyl)-L-threonine","type":"exact"},{"name":"O3-(6-phosphomannosyl)threonine","type":"exact"}],"termid":"MOD:01617"}


id: GO:0140027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the contractile vacuole to a specific location.","definition_xrefs":["PMID:19687255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle localization","termid":"GO:0051648"},{"relation_name":"is_a","term_name":"vacuolar localization","termid":"GO:1990849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"contractile vacuole localization","synonyms":[{"name":"establishment of contractile vacuole localization","type":"narrow"}],"termid":"GO:0140027"}


id: PR:Q9UUI7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22F8.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUI7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase [UDP-forming] 100 kDa subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.05","synonyms":[{"name":"Spom972h-SPAC22F8.05","type":"exact"},{"name":"UDP-glucose-glucosephosphate glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"trehalose-6-phosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUI7"}


id: MOD:01156
data:
  {"annotated_genes":["SJAG_01671","SJAG_01162","SJAG_02489","SJAG_03641","SJAG_03032","SJAG_02827","SJAG_04067","SJAG_00318","SJAG_03009","SJAG_04972","SJAG_00109","SJAG_04953","SJAG_02766","SJAG_03290","SJAG_01488","SJAG_02435","SJAG_04125","SJAG_02472","SJAG_04553","SJAG_01626","SJAG_00288","SJAG_00733","SJAG_02388","SJAG_00464","SJAG_02522","SJAG_04819","SJAG_00254","SJAG_01029","SJAG_02763","SJAG_00096","SJAG_02183","SJAG_00331","SJAG_04238","SJAG_02694","SJAG_00784","SJAG_02504","SJAG_04789","SJAG_01587","SJAG_02498","SJAG_02592","SJAG_04551","SJAG_03012","SJAG_01970","SJAG_02260"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[80022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00226"},{"annotations":[80040,80041,79984,80009,79931,80184,80185,80198,80200,79930,80233,80236,80155,80240,80242,80186,80197,79940,80065,80228,80000,80136,80137,80013,80039,80196,79969,80143,80235,79982,80154,79932,80031,79981,80006,80156,79948,80234,79983,80157,80134,80241,80020,79941,80021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00689"},{"annotations":[80092,79952,79954,80094,80095,79955,80089,80093,80166,80168,80169,80167,80170,80090,79953,80091,79951,80165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00693"},{"annotations":[79974,80128,80159,80085,80206,80058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00042"},{"annotations":[80026,79928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00050"},{"annotations":[80125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00126"},{"annotations":[80124,80025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00123"},{"annotations":[79978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00127"},{"annotations":[118902,118599,118602,79946,118901,118600,79945,118601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"},{"annotations":[80244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00159"},{"annotations":[118975,118703,118977,118638,118976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00696"}]},"cv_name":"PSI-MOD","definition":"Modified amino acid residue derived from a natural amino acid by a real or hypothetical chemical process.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification","termid":"MOD:00000"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00096":null,"SJAG_00109":null,"SJAG_00254":null,"SJAG_00288":null,"SJAG_00318":null,"SJAG_00331":null,"SJAG_00464":null,"SJAG_00733":null,"SJAG_00784":null,"SJAG_01029":null,"SJAG_01162":null,"SJAG_01488":null,"SJAG_01587":null,"SJAG_01626":null,"SJAG_01671":null,"SJAG_01970":null,"SJAG_02183":null,"SJAG_02260":null,"SJAG_02388":null,"SJAG_02435":null,"SJAG_02472":null,"SJAG_02489":null,"SJAG_02498":null,"SJAG_02504":null,"SJAG_02522":null,"SJAG_02592":null,"SJAG_02694":null,"SJAG_02763":null,"SJAG_02766":null,"SJAG_02827":null,"SJAG_03009":null,"SJAG_03012":null,"SJAG_03032":null,"SJAG_03290":null,"SJAG_03641":null,"SJAG_04067":null,"SJAG_04125":null,"SJAG_04238":null,"SJAG_04551":null,"SJAG_04553":null,"SJAG_04789":null,"SJAG_04819":null,"SJAG_04953":null,"SJAG_04972":null},"genotype_count":0,"is_obsolete":false,"name":"protein modification categorized by chemical process","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null,"PMID:32915139":null,"PMID:33791858":null,"PMID:34198697":null,"PMID:36408920":null},"termid":"MOD:01156","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0036460":null,"GO:0042149":null,"GO:0071475":null,"GO:0120306":null,"GO:1904547":null,"MOD:00042":null,"MOD:00046":null,"MOD:00050":null,"MOD:00123":null,"MOD:00126":null,"MOD:00127":null,"MOD:00159":null,"MOD:00226":null,"MOD:00689":null,"MOD:00693":null,"MOD:00696":null}}


id: PR:Q9P6R4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- msd1 gene.","definition_xrefs":["UniProtKB:Q9P6R4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 172 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13E7.06","synonyms":[{"name":"Spom972h-msd1","type":"exact"}],"termid":"PR:Q9P6R4"}


id: MONDO:0007815
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immunodeficiency with defective leukocyte and lymphocyte function and with response to histamine-1 antagonist (obsolete MONDO:0007815)","termid":"MONDO:0007815","xrefs":{"Monarch":{"xref_id":"0007815"}}}


id: GO:1902818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ethyl acetate.","definition_xrefs":["GO_REF:0000068","GOC:mengo_curators","GOC:TermGenie","PMID:16013377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate ester metabolic process","termid":"GO:1900619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ethyl acetate metabolic process","synonyms":[{"name":"ethyl acetate metabolism","type":"exact"},{"name":"ethyl ethanoate metabolic process","type":"exact"}],"termid":"GO:1902818"}


id: PBO:0064122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 2 like 2, transient receptor potential cation channel","termid":"PBO:0064122"}


id: MONDO:0007381
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epithelial recurrent erosion dystrophy (ERED) is a rare form of superficial corneal dystrophy characterized by recurrent episodes of epithelial erosions from childhood in the absence of associated diseases, with occasional impairment of vision.","definition_xrefs":["Orphanet:293381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"superficial corneal dystrophy","termid":"MONDO:0020212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"epithelial recurrent erosion dystrophy","secondary_identifiers":["OMIM:122400","icd11.foundation:1105690299","DOID:0070337","GARD:17338","UMLS:C1852551","MESH:C565155","MEDGEN:342263","SCTID:715908008"],"synonyms":[{"name":"ERED","type":"exact"},{"name":"corneal erosions, recurring hereditary","type":"related"},{"name":"dystrophia Helsinglandica","type":"exact"},{"name":"dystrophia Smolandiensis","type":"exact"},{"name":"epithelial recurrent erosion dystrophy","type":"exact"},{"name":"recurrent hereditary corneal erosions","type":"exact"}],"termid":"MONDO:0007381","xrefs":{"Monarch":{"xref_id":"0007381"}}}


id: GO:0015843
data:
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id: GO:1903071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of ER-associated ubiquitin-dependent protein catabolic process.","definition_xrefs":["GOC:rph","PMID:17872946","GOC:TermGenie","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ER-associated ubiquitin-dependent protein catabolic process (obsolete GO:1903071)","termid":"GO:1903071"}


id: GO:0031809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a H3 histamine receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled histamine receptor binding","termid":"GO:0031806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"H3 histamine receptor binding","synonyms":[{"name":"H3 histamine receptor ligand","type":"narrow"}],"termid":"GO:0031809"}


id: PATO:0000154
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000154 pain threshold (obsolete PATO:0000154)","termid":"PATO:0000154"}


id: PBO:0070492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 27","termid":"PBO:0070492"}


id: GO:0090084
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id: SO:0001527
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id: GO:0031697
data:
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id: GO:0046711
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id: PBO:0065362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoserine aminotransferase 1 pseudogene 3","termid":"PBO:0065362"}


id: MONDO:0035363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete IRF2BPL-related regressive neurodevelopmental disorder-dystonia-seizures syndrome (obsolete MONDO:0035363)","termid":"MONDO:0035363","xrefs":{"Monarch":{"xref_id":"0035363"}}}


id: GO:0052889
data:
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id: PBO:0079205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSR3 ribosome maturation factor","termid":"PBO:0079205"}


id: GO:0006545
data:
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id: PBO:0000912
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inferred from genetic map position","termid":"PBO:0000912"}


id: GO:0033179
data:
  {"annotated_genes":["SJAG_00516","SJAG_03406","SJAG_05294","SJAG_01913","SJAG_02782","SJAG_03962","SJAG_02023"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89320,95137,103409,89637,95318,99440,91535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000220"}]},"cv_name":"cellular_component","definition":"A protein complex that forms part of a proton-transporting V-type ATPase and mediates proton transport across a membrane. The V0 complex consists of at least four different subunits (a,c,d and e); six or more c subunits form a proton-binding rotor ring.","definition_xrefs":["ISBN:0716743663","PMID:16449553","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting two-sector ATPase complex, proton-transporting domain","termid":"GO:0033177"},{"relation_name":"part_of","term_name":"proton-transporting V-type ATPase complex","termid":"GO:0033176"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00516":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_03962":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"proton-transporting V-type ATPase, V0 domain","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033179","terms_by_termid":{"GO:0000220":null}}


id: GO:0039665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Induction of organellar membrane permeabilization triggered by an interaction between the host membrane and a membrane-penetration protein associated with a viral capsid. Results in release of the virus contents from an organelle into the host cell cytoplasm.","definition_xrefs":["GOC:jl","UniProtKB-KW:KW-1173","GOC:bf","VZ:985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"symbiont entry into host cell via permeabilization of host membrane","termid":"GO:0140267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"permeabilization of host organelle membrane involved in viral entry into host cell","synonyms":[{"name":"viral entry into host cell via permeabilization of host organelle membrane","type":"related"},{"name":"viral membrane-penetration protein","type":"related"},{"name":"viral penetration via host endosomal membrane disruption by virus","type":"exact"},{"name":"viral penetration via perforation of host organellar membrane by virus","type":"exact"},{"name":"viral penetration via permeabilization of host organellar membrane","type":"exact"}],"termid":"GO:0039665"}


id: MONDO:0000754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intestinal disorder characterized by an opening in the anal canal to the perianal skin. In the vast majority of cases there is a history of perianal abscess.","definition_xrefs":["NCIT:C60785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectal disorder","termid":"MONDO:0001593"},{"relation_name":"is_a","term_name":"intestinal fistula","termid":"MONDO:1040017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"anal fistula","secondary_identifiers":["SCTID:72779005","DOID:0060328","GARD:20568","HP:0010447","MEDGEN:61482","UMLS:C0205929","Orphanet:228113","MESH:D012003","ICD10CM:K60.3","icd11.foundation:206903882"],"synonyms":[{"name":"anal fistula","type":"exact"},{"name":"anal fistula (disease)","type":"exact"},{"name":"anorectal fistula","type":"exact"}],"termid":"MONDO:0000754","xrefs":{"Monarch":{"xref_id":"0000754"}}}


id: MONDO:0018929
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrosis","termid":"MONDO:0018381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medial condensing osteitis of the clavicle","secondary_identifiers":["Orphanet:57196","GARD:10910","MEDGEN:1710994","UMLS:C5396729"],"synonyms":[{"name":"condensing osteitis of the clavicle","type":"exact"},{"name":"condensing osteitis of the medial clavicle","type":"exact"},{"name":"osteitis condensans of the clavicle","type":"exact"}],"termid":"MONDO:0018929","xrefs":{"Monarch":{"xref_id":"0018929"}}}


id: GO:0060245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which information about the density of cells in a population is received and converted into a molecular signal.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of biotic stimulus","termid":"GO:0009595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of cell density","termid":"GO:0060245"}


id: MONDO:0011697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Waardenburg's syndrome characterized by pigmentary abnormalities of the hair, skin, and eyes, congenital sensorineural hearing loss, and absence of lateral displacement of the inner canthus of each eye that has material basis in variation in the chromosome region 8p23.","definition_xrefs":["PMID:20127975","PMID:11810298","DOID:0110951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg syndrome type 2","termid":"MONDO:0019517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Waardenburg syndrome type 2C","secondary_identifiers":["GARD:15396","OMIM:606662","UMLS:C1847722","MEDGEN:335755","MESH:C564684"],"synonyms":[{"name":"WS2C","type":"exact"},{"name":"Waardenburg syndrome type IIC","type":"exact"},{"name":"Waardenburg syndrome, type 2C","type":"related"}],"termid":"MONDO:0011697","xrefs":{"Monarch":{"xref_id":"0011697"}}}


id: PBO:0082845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Copper-binding metallothionein; required for wild-type copper resistance","termid":"PBO:0082845"}


id: GO:0070150
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96496],"is_not":false,"summary":null,"term":"GO:0070150"}]},"cv_name":"biological_process","definition":"The process of coupling glycine to glycyl-tRNA in a mitochondrion, catalyzed by glycyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycyl-tRNA aminoacylation","termid":"GO:0006426"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0140053","GO:0006399","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"mitochondrial glycyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070150","terms_by_termid":{"GO:0070150":null}}


id: PBO:0088878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complex III assembly protein Cbp3","termid":"PBO:0088878"}


id: PBO:0056124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LysM domain containing 1","termid":"PBO:0056124"}


id: PATO:0001817
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fatigability which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased strength","termid":"PATO:0001779"},{"relation_name":"is_a","term_name":"fatigability","termid":"PATO:0001815"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased fatigability","synonyms":[{"name":"low fatigability","type":"exact"}],"termid":"PATO:0001817"}


id: PBO:0110233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral nuclear inner membrane protein Bqt4","termid":"PBO:0110233"}


id: SO:0001831
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match to a protein HMM such as pfam.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein_match","termid":"SO:0000349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein_hmm_match","synonyms":[{"name":"protein hmm match","type":"exact"}],"termid":"SO:0001831"}


id: GO:0003437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell communication that contributes to the shaping of the growth plate cartilage.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"part_of","term_name":"growth plate cartilage morphogenesis","termid":"GO:0003422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell communication involved in growth plate cartilage morphogenesis","termid":"GO:0003437"}


id: PBO:0089556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA 2'-O-methyltransferase fibrillarin-like","termid":"PBO:0089556"}


id: MOD:00218
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-serine residue and the 5'-end of RNA through a phosphodiester to form O4'-(phospho-5'-RNA)-L-serine.","definition_xrefs":["RESID:AA0213","PubMed:1705009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleic acid linked residue","termid":"MOD:00751"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(phospho-5'-RNA)-L-serine","synonyms":[{"name":"(S)-2-amino-3-(5'-ribonucleic acid phosphonoxy)propanoic acid","type":"exact"},{"name":"MOD_RES O-(5'-phospho-RNA)-serine","type":"exact"},{"name":"O-(phospho-5'-RNA)-L-serine","type":"exact"},{"name":"O3-(phospho-5'-RNA)-L-serine","type":"exact"},{"name":"O3-L-serine 5'-RNA phosphodiester","type":"exact"}],"termid":"MOD:00218"}


id: PBO:0070537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 3","termid":"PBO:0070537"}


id: MONDO:0007290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cataract (disease) in which the cause of the disease is a mutation in the HSF4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 5 multiple types","secondary_identifiers":["MEDGEN:78608","UMLS:C0266537","DOID:0110255","MESH:C535342","OMIM:116800"],"synonyms":[{"name":"CTRCT5","type":"exact"},{"name":"HSF4 cataract (disease)","type":"exact"},{"name":"cataract (disease) caused by mutation in HSF4","type":"exact"},{"name":"cataract 5, multiple types","type":"related"},{"name":"cataract, Marner type","type":"related"},{"name":"cataract, lamellar","type":"related"}],"termid":"MONDO:0007290","xrefs":{"Monarch":{"xref_id":"0007290"}}}


id: FYPO:0005824
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the permeability of the plasma membrane to one or more substances is greater than normal.","definition_xrefs":["PMID:27886462","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal plasma membrane morphology during vegetative growth","termid":"FYPO:0000364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased plasma membrane permeability","synonyms":[{"name":"increased plasma membrane permeability during mitotic cell cycle","type":"related"},{"name":"increased plasma membrane permeability during vegetative growth","type":"exact"}],"termid":"FYPO:0005824"}


id: PR:Q9UUA5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC409.19c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUA5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaxin-like protein C409.19c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.19c","synonyms":[{"name":"Spom972h-SPBC409.19c","type":"exact"}],"termid":"PR:Q9UUA5"}


id: GO:0120283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein serine/threonine kinase.","definition_xrefs":["GOC:krc","PMID:28608965","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase binding","termid":"GO:0019901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"protein serine/threonine kinase binding","termid":"GO:0120283"}


id: GO:0075166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its G-protein gamma subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of G-protein gamma subunit-mediated signal transduction in response to host (obsolete GO:0075166)","synonyms":[{"name":"positive regulation of symbiont G-protein gamma subunit-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075166"}


id: MONDO:0004913
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"esotropia","termid":"MONDO:0004896"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternating esotropia","secondary_identifiers":["SCTID:39837002","DOID:9888","icd11.foundation:935468618","ICD9:378.05","MEDGEN:57515","UMLS:C0152205","ICD10CM:H50.05"],"termid":"MONDO:0004913","xrefs":{"Monarch":{"xref_id":"0004913"}}}


id: MONDO:0014563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"mitochondrial disease","termid":"MONDO:0044970"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial short-chain Enoyl-Coa hydratase 1 deficiency","secondary_identifiers":["UMLS:C4225391","GARD:13019","OMIM:616277","MEDGEN:902729","DOID:0070540","Orphanet:653880"],"synonyms":[{"name":"ECHS1D","type":"related"},{"name":"mitochondrial short-chain ENOYL-CoA hydratase 1 deficiency","type":"related"},{"name":"mitochondrial short-chain Enoyl-Coa hydratase 1 deficiency","type":"exact"},{"name":"short-chain enoyl-CoA hydratase deficiency","type":"related"}],"termid":"MONDO:0014563","xrefs":{"Monarch":{"xref_id":"0014563"}}}


id: MONDO:1010763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vitiligo that occurs in water buffalo.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitiligo, non-human animal","termid":"MONDO:1010136"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitiligo, water buffalo","secondary_identifiers":["OMIA:001055-89462"],"termid":"MONDO:1010763","xrefs":{"Monarch":{"xref_id":"1010763"}}}


id: MONDO:0022098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Catamenial pneumothorax is an extremely rare condition that affects women. Pneumothorax is the medical term for a collapsed lung, a condition in which air or gas is trapped in the space surrounding the lungs causing the lungs to collapse. Women with catamenial pneumothorax have recurrent episodes of pneumothorax that occur within 72 hours before or after the start of menstruation. The exact cause of catamenial pneumothorax is unknown and several theories have been proposed. Many cases are associated with the abnormal development of endometrial tissue outside of the uterus (endometriosis). Some believe that catamenial pneumothorax is the most common form of thoracic endometriosis (a condition in which the endometrial tissue grows in or around the lungs). A diagnosis of catamenial pneumothorax is usually suspected when a woman of reproductive age and with endometriosis has episodes of pneumothorax.Treatment is with hormones and surgery.","definition_xrefs":["GARD:0009858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumothorax","termid":"MONDO:0002076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catamenial pneumothorax","secondary_identifiers":["UMLS:C0340007","MEDGEN:83298","MESH:C538279","SCTID:233642001","icd11.foundation:1744257132"],"synonyms":[{"name":"catamenial pneumothorax","type":"exact"},{"name":"premenstrual pneumothorax","type":"related"}],"termid":"MONDO:0022098","xrefs":{"Monarch":{"xref_id":"0022098"}}}


id: PBO:0116194
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human EG5","termid":"PBO:0116194"}


id: PBO:0085643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in localization of Cdc24p to the site of bud growth; may act as a membrane anchor; localizes to the bud neck and bud tip; potentially phosphorylated by Cdc28p; TOS2 has a paralog, SKG6, that arose from the whole genome duplication","termid":"PBO:0085643"}


id: GO:1901023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 4-hydroxyphenylacetate.","definition_xrefs":["PMID:8550403","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"4-hydroxyphenylacetate metabolic process","termid":"GO:1901022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"4-hydroxyphenylacetate catabolic process","synonyms":[{"name":"4-hydroxyphenylacetate breakdown","type":"exact"},{"name":"4-hydroxyphenylacetate catabolism","type":"exact"},{"name":"4-hydroxyphenylacetate degradation","type":"exact"}],"termid":"GO:1901023"}


id: GO:0141035
data:
  {"annotated_genes":["SJAG_04883"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109411],"is_not":false,"summary":null,"term":"GO:0141035"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1,2-diacyl-sn-glycerol + CTP = a 1,2-diacyl-sn-glycero-3-phosphate + CDP + H+.","definition_xrefs":["RHEA:25948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid kinase activity","termid":"GO:0001727"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"CTP-dependent diacylglycerol kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.7.1.174","MetaCyc:RXN-12959","KEGG_REACTION:R09944"],"synonyms":[{"name":"DAG kinase activity","type":"broad"},{"name":"diacylglycerol kinase (CTP dependent)","type":"broad"},{"name":"diacylglycerol kinase activity","type":"broad"},{"name":"diacylglycerol kinase activity (CTP)","type":"exact"}],"termid":"GO:0141035","terms_by_termid":{"GO:0141035":null}}


id: GO:0072025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the distal convoluted tubule over time, from its formation to the mature structure. The distal convoluted tubule is the first segment of the nephron lying just downstream from the loop of Henle, immediately after the macula densa. Among other functions, in humans it is responsible for the reabsorption of about 5% of filtered sodium via the thiazide-sensitive Na-Cl symporter.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"},{"relation_name":"part_of","term_name":"distal tubule development","termid":"GO:0072017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"distal convoluted tubule development","termid":"GO:0072025"}


id: PR:Q9HDW6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vma5 gene.","definition_xrefs":["UniProtKB:Q9HDW6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB2B4.05","synonyms":[{"name":"Spom972h-vma5","type":"exact"},{"name":"V-ATPase subunit C (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit C (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDW6"}


id: PBO:0041258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 putative open reading frame 220","termid":"PBO:0041258"}


id: PATO:0002133
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A displaced angular placement quality inhering in a body part by virtue of the bearer's movement closer the medial plane of the body.","definition_xrefs":["wikipedia:wikipedia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"displaced to","termid":"PATO:0002168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adduction","termid":"PATO:0002133"}


id: PBO:0044255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall biogenesis 43 C-terminal homolog","termid":"PBO:0044255"}


id: FYPO:0002065
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a 3'-5'-exoribonuclease activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal 3'-5'-exoribonuclease activity","termid":"FYPO:0002065"}


id: PBO:0078263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 2-1","termid":"PBO:0078263"}


id: PBO:0068513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 104, pseudogene","termid":"PBO:0068513"}


id: PBO:0017762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Rcf1","termid":"PBO:0017762"}


id: PR:O94490
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC417.09c gene.","definition_xrefs":["UniProtKB:O94490","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C417.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC417.09c","synonyms":[{"name":"Spom972h-SPCC417.09c","type":"exact"}],"termid":"PR:O94490"}


id: GO:0019931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-lysine to form N6-3,4-didehydroretinylidene-L-lysine.","definition_xrefs":["RESID:AA0312"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-chromophore linkage via peptidyl-N6-3-dehydroretinal-L-lysine (obsolete GO:0019931)","termid":"GO:0019931"}


id: GO:0034694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin stimulus.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"},{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to prostaglandin","synonyms":[{"name":"response to prostaglandin stimulus","type":"exact"}],"termid":"GO:0034694"}


id: MOD:01464
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to an L-methioninium (protonated L-methionine).","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"},{"relation_name":"is_a","term_name":"alpha-amino protonated residue","termid":"MOD:01700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protonated L-methionine (L-methioninium) residue","termid":"MOD:01464"}


id: SO:0002007
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An MNV is a multiple nucleotide variant (substitution) in which the inserted sequence is the same length as the replaced sequence.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substitution","termid":"SO:1000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MNV","synonyms":[{"name":"multiple nucleotide substitution","type":"exact"},{"name":"multiple nucleotide variant","type":"exact"}],"termid":"SO:0002007"}


id: PBO:0116393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mug2/mug135/meu2 family protein","termid":"PBO:0116393"}


id: GO:0097423
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An organelle arrangement comprised of the following elements: a mitochondrion positioned near the presynaptic membrane; an electron-dense mitochondrial plaque adjacent to the outer mitochondrial membrane that faces the presynaptic membrane; filament-like elements appearing to link the mitochondrial plaque to a cell-cell junction region (sometimes termed punctum adherens); tubular or vesicular-appearing membrane (also called vesicular chain) interposed among the filaments. Mitochondrion-associated adherens complexes were initially described in the dorsal horn of the spinal cord. They are found in calyces and other large terminals of the auditory brainstem, and in a variety of mammalian species including humans.","definition_xrefs":["PMID:20089910","NIF_Subcellular:sao1933817066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"mitochondrion-associated adherens complex","synonyms":[{"name":"MAC","type":"related"},{"name":"mitochondrial adhaerens complex","type":"exact"}],"termid":"GO:0097423"}


id: MONDO:0033946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Forms of hereditary angioedema that occur due to mutations in the gene for complement C1 inhibitor protein. Type I hereditary angioedema is associated with reduced serum levels of complement C1 inhibitor protein. Type II hereditary angioedema is associated with the production of a non-functional complement C1 inhibitor protein.","definition_xrefs":["MESH:D056829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary angioedema","termid":"MONDO:0019623"},{"relation_name":"is_a","term_name":"serpinopathy","termid":"MONDO:0027749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hereditary angioedema with C1Inh deficiency","secondary_identifiers":["Orphanet:528623","GARD:22194","MEDGEN:1812520","UMLS:C4552294","DOID:0080939","OMIM:106100"],"synonyms":[{"name":"C1 esterase inhibitor, deficiency of","type":"related"},{"name":"HAE1","type":"related"},{"name":"angioedema, hereditary, 1 and 2","type":"exact"},{"name":"angioedema, hereditary, type 1","type":"related"},{"name":"angioedema, hereditary, type 1/2","type":"exact"},{"name":"angioedema, hereditary, type 2","type":"related"},{"name":"angioedema, hereditary, type I","type":"related"},{"name":"angioneurotic edema, hereditary","type":"related"}],"termid":"MONDO:0033946","xrefs":{"Monarch":{"xref_id":"0033946"}}}


id: GO:0052876
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2O + methylamine + 2 oxidized [amicyanin] = formaldehyde + 2 H+ + NH4+ + 2 reduced [amicyanin].","definition_xrefs":["RHEA:30207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, with a copper protein as acceptor","termid":"GO:0052877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"methylamine dehydrogenase (amicyanin) activity","secondary_identifiers":["EC:1.4.9.1","KEGG_REACTION:R00606","UM-BBD_reactionID:r0075"],"synonyms":[{"name":"MADH activity","type":"broad"},{"name":"amine dehydrogenase","type":"broad"},{"name":"methylamine dehydrogenase activity","type":"exact"},{"name":"methylamine:amicyanin oxidoreductase (deaminating) activity","type":"exact"},{"name":"primary-amine dehydrogenase","type":"broad"}],"termid":"GO:0052876"}


id: PBO:0030073
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_serine_import","termid":"PBO:0030073"}


id: GO:0048898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anterior lateral line system over time, from its formation to the mature structure. The anterior lateral line system develops from cranial ectodermal placodes, situated between the eye and the ear, that give rise to both the neuromasts and the anterior lateral line sensory nerves that innervate the neuromasts. The anterior lateral line system consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the head of all fishes and most amphibians and are innervated by several lateral line nerves, which project to the hindbrain. The anterior lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance.","definition_xrefs":["PMID:15018940","ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line system development","termid":"GO:0048925"},{"relation_name":"part_of","term_name":"mechanosensory lateral line system development","termid":"GO:0048881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line system development","synonyms":[{"name":"ALL system development","type":"related"}],"termid":"GO:0048898"}


id: PR:Q9Y7Y4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protoheme IX farnesyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11048:SF3","OMA:SCHPO03301","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protoheme IX farnesyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.02c","secondary_identifiers":["UniProtKB:Q9Y7Y4"],"synonyms":[{"name":"Spom972h-COX10","type":"exact"},{"name":"heme O synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7Y4"}


id: MONDO:0004571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal obstruction","termid":"MONDO:0004565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal impaction","secondary_identifiers":["MEDGEN:581145","UMLS:C0392503","DOID:8448","ICD9:560.30","SCTID:62851005","ICD9:560.39"],"termid":"MONDO:0004571","xrefs":{"Monarch":{"xref_id":"0004571"}}}


id: GO:0086036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the establishment or extent of a membrane potential in a cardiac muscle cell (a cardiomyocyte). A membrane potential is the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle cell membrane potential","termid":"GO:0086036"}


id: GO:0015014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of polysaccharide chain component of heparan sulfate proteoglycan.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"part_of","term_name":"heparan sulfate proteoglycan biosynthetic process","termid":"GO:0015012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"heparan sulfate proteoglycan biosynthetic process, chain elongation","synonyms":[{"name":"heparan sulfate proteoglycan anabolism, polysaccharide chain anabolism","type":"exact"},{"name":"heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process","type":"exact"},{"name":"heparan sulfate proteoglycan chain elongation","type":"exact"},{"name":"heparan sulfate proteoglycan formation, polysaccharide chain biosynthesis","type":"exact"},{"name":"heparan sulfate proteoglycan formation, polysaccharide chain formation","type":"exact"},{"name":"heparan sulfate proteoglycan synthesis, polysaccharide chain synthesis","type":"exact"},{"name":"heparan sulphate proteoglycan biosynthesis, polysaccharide chain biosynthesis","type":"exact"},{"name":"heparan sulphate proteoglycan biosynthesis, polysaccharide chain biosynthetic process","type":"exact"},{"name":"heparin proteoglycan biosynthetic process, polysaccharide chain biosynthetic process","type":"related"}],"termid":"GO:0015014"}


id: MONDO:0001990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare malignant peripheral nerve sheath tumor that arises from the heart.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart sarcoma","termid":"MONDO:0003354"},{"relation_name":"is_a","term_name":"malignant peripheral nerve sheath tumor","termid":"MONDO:0017827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005267"],"is_obsolete":false,"name":"malignant cardiac peripheral nerve sheath neoplasm","secondary_identifiers":["MEDGEN:233146","NCIT:C5367","DOID:14534","UMLS:C1334569"],"synonyms":[{"name":"CARDIAC schwannoma, malignant","type":"exact"},{"name":"Cardiac MPNST","type":"exact"},{"name":"Cardiac malignant peripheral nerve sheath tumor","type":"exact"},{"name":"Cardiac malignant peripheral nerve sheath tumour","type":"exact"},{"name":"MPNST of heart","type":"exact"},{"name":"MPNST of the heart","type":"exact"},{"name":"heart MPNST","type":"exact"},{"name":"heart malignant peripheral nerve sheath tumor","type":"exact"},{"name":"heart malignant peripheral nerve sheath tumour","type":"exact"},{"name":"malignant Cardiac neurilemmoma","type":"exact"},{"name":"malignant Cardiac peripheral nerve sheath neoplasm","type":"exact"},{"name":"malignant Cardiac peripheral nerve sheath tumor","type":"exact"},{"name":"malignant Cardiac peripheral nerve sheath tumour","type":"exact"},{"name":"malignant Cardiac schwannoma","type":"exact"},{"name":"malignant heart neurilemmoma","type":"exact"},{"name":"malignant heart peripheral nerve sheath neoplasm","type":"exact"},{"name":"malignant heart peripheral nerve sheath tumor","type":"exact"},{"name":"malignant heart peripheral nerve sheath tumour","type":"exact"},{"name":"malignant heart schwannoma","type":"exact"},{"name":"malignant neurilemmoma of heart","type":"exact"},{"name":"malignant neurilemmoma of the heart","type":"exact"},{"name":"malignant peripheral nerve sheath neoplasm of heart","type":"exact"},{"name":"malignant peripheral nerve sheath neoplasm of the heart","type":"exact"},{"name":"malignant peripheral nerve sheath tumor of heart","type":"exact"},{"name":"malignant peripheral nerve sheath tumor of the heart","type":"exact"},{"name":"malignant peripheral nerve sheath tumour of heart","type":"exact"},{"name":"malignant peripheral nerve sheath tumour of the heart","type":"exact"},{"name":"malignant schwannoma of heart","type":"exact"},{"name":"malignant schwannoma of the heart","type":"exact"}],"termid":"MONDO:0001990","xrefs":{"Monarch":{"xref_id":"0001990"}}}


id: PBO:0064139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase, membrane associated tyrosine/threonine 1","termid":"PBO:0064139"}


id: PBO:0080667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 12","termid":"PBO:0080667"}


id: GO:0004947
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with bradykinin to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"bradykinin receptor activity","termid":"GO:0004947"}


id: PBO:0065088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cAMP-activated catalytic subunit alpha","termid":"PBO:0065088"}


id: MONDO:0034895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare syndromic esophageal malformation characterized by severe congenital brachyesophagus with midline diaphragmatic hernia and secondary intrathoracic stomach, and vertebral anomalies (in particular rachischisis of the cervical/thoracic spine). Additional reported manifestations include intrauterine growth restriction, short neck, intestinal malrotation, herniation of other abdominal organs, and cleft lip, among others. The condition is mostly fatal in the neonatal or early infantile period.","definition_xrefs":["Orphanet:514352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital brachyesophagus-intrathoracic stomach-vertebral anomalies syndrome","secondary_identifiers":["MEDGEN:1807957","GARD:22076","UMLS:C5680208"],"synonyms":[{"name":"serpentine-like syndrome","type":"exact"}],"termid":"MONDO:0034895","xrefs":{"Monarch":{"xref_id":"0034895"}}}


id: PBO:0030812
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_anisomycin","termid":"PBO:0030812"}


id: PBO:0057601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 938","termid":"PBO:0057601"}


id: PBO:0044978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DExH-box helicase 30","termid":"PBO:0044978"}


id: PBO:0079831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uromodulin","termid":"PBO:0079831"}


id: GO:0043829
data:
  {"annotated_genes":["SJAG_04380"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103453],"is_not":false,"summary":null,"term":"GO:0043829"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine-37 + H2O = inosine-37 + NH3, in a tRNA-Ala molecule.","definition_xrefs":["RHEA:50968","PMID:9707437","PMID:8915538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA-specific adenosine deaminase activity","termid":"GO:0008251"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"tRNA-specific adenosine-37 deaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.5.4.34"],"synonyms":[{"name":"TAD1","type":"related"},{"name":"tRNA(Ala)-A37 deaminase activity","type":"exact"},{"name":"tRNA-specific adenosine deaminase 1","type":"exact"}],"termid":"GO:0043829","terms_by_termid":{"GO:0043829":null}}


id: GO:0052491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of the salicylic acid-mediated defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of symbiont salicylic acid-mediated defense response (obsolete GO:0052491)","synonyms":[{"name":"negative regulation by organism of symbiont salicylic acid-mediated defense response","type":"exact"},{"name":"negative regulation of symbiont SA-mediated defense response","type":"exact"},{"name":"suppression by organism of symbiont salicylic acid-mediated defense response","type":"exact"},{"name":"suppression of symbiont SA mediated defense response","type":"exact"}],"termid":"GO:0052491"}


id: MONDO:0011027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"type 2 diabetes mellitus","termid":"MONDO:0005148"},{"relation_name":"is_a","term_name":"monogenic diabetes","termid":"MONDO:0015967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005066","MONDO:0005015"],"is_obsolete":false,"name":"diabetes mellitus, noninsulin-dependent, 1","secondary_identifiers":["UMLS:C1832544","MESH:C563359","OMIM:601283","MEDGEN:321979"],"synonyms":[{"name":"NIDDM1","type":"related"},{"name":"diabetes mellitus, noninsulin-dependent 1","type":"exact"},{"name":"diabetes mellitus, noninsulin-dependent, 1","type":"exact"},{"name":"diabetes mellitus, noninsulin-dependent, type 1","type":"exact"},{"name":"noninsulin-dependent diabetes mellitus 1","type":"related"}],"termid":"MONDO:0011027","xrefs":{"Monarch":{"xref_id":"0011027"}}}


id: PBO:0047756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folate hydrolase 1","termid":"PBO:0047756"}


id: FYPO:0006663
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the nucleus is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enlarged nucleus","termid":"FYPO:0002255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"elongated nucleus","synonyms":[{"name":"elongated nuclei","type":"exact"},{"name":"long nucleus","type":"exact"}],"termid":"FYPO:0006663"}


id: PBO:0002669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta-1-pyrroline-5-carboxylate reductase (predicted)","termid":"PBO:0002669"}


id: GO:0060217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the characteristics of a mature hemangioblast. Hemangioblasts are the proposed common precursor of blood and endothelial lineages.","definition_xrefs":["GOC:bf","PMID:15378083","GOC:dph","PMID:9670018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell differentiation","termid":"GO:0048333"},{"relation_name":"part_of","term_name":"primitive hemopoiesis","termid":"GO:0060215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hemangioblast cell differentiation","termid":"GO:0060217"}


id: PBO:0038318
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abstract","termid":"PBO:0038318"}


id: PBO:0070422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribulose-5-phosphate-3-epimerase like 1","termid":"PBO:0070422"}


id: PBO:0002111
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin B Six Uptake","termid":"PBO:0002111"}


id: PBO:0018013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inorganic phosphate transmembrane transporter (predicted)","termid":"PBO:0018013"}


id: PBO:0029854
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_and_H3-K14_acetylation_at_centromere_outer_repeat","termid":"PBO:0029854"}


id: PBO:0047150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 182 member A","termid":"PBO:0047150"}


id: PBO:0068273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 10 (inactive)","termid":"PBO:0068273"}


id: PBO:0061919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily E member 2","termid":"PBO:0061919"}


id: MONDO:0020622
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood group--stoltzfus system (obsolete MONDO:0020622)","secondary_identifiers":["OMIM:111800"],"synonyms":[{"name":"BLOOD GROUP--STOLTZFUS SYSTEM","type":"related"},{"name":"Sf","type":"related"},{"name":"blood group, Stoltzfus system","type":"exact"}],"termid":"MONDO:0020622","xrefs":{"Monarch":{"xref_id":"0020622"}}}


id: _global:axis_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"axis_of","secondary_identifiers":["GOREL:0001000"],"termid":"_global:axis_of"}


id: FYPO:0002937
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any unspliced or incompletely spliced mRNA precursor measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased pre-mRNA level","synonyms":[{"name":"decreased accumulation of pre-mRNA transcripts","type":"related"},{"name":"decreased pre-mRNA accumulation","type":"related"},{"name":"decreased pre-mRNA level during mitotic cell cycle","type":"related"},{"name":"decreased pre-mRNA level during vegetative growth","type":"exact"},{"name":"decreased pre-mRNA transcript level","type":"exact"},{"name":"reduced pre-mRNA level","type":"exact"}],"termid":"FYPO:0002937"}


id: PBO:0047388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 27","termid":"PBO:0047388"}


id: PBO:0073452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFT2 domain containing 1","termid":"PBO:0073452"}


id: PBO:0082017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger X-linked duplicated A","termid":"PBO:0082017"}


id: RO:0002623
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"visited_by","termid":"RO:0002619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_flowers_visited_by","termid":"RO:0002623"}


id: PBO:0003623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 adaptor complex subunit Alp3 (predicted)","termid":"PBO:0003623"}


id: PBO:0075678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"squalene epoxidase","termid":"PBO:0075678"}


id: MONDO:0003265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A category of psychiatric disorders which are characterized by emotional or behavioral symptoms that develop within 3 months of a stressor and do not persist for more than an additional 6 months after the stressor is no longer present.","definition_xrefs":["NCIT:C92191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mental disorder","termid":"MONDO:0005084"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adjustment disorder","secondary_identifiers":["icd11.foundation:264310751","ICD9:309.89","DOID:507","ICD9:309.9","SCTID:17226007","ICD9:309","MEDGEN:1338","MESH:D000275","UMLS:C0001546"],"synonyms":[{"name":"adaptation reaction","type":"related"},{"name":"adjustment disease","type":"exact"},{"name":"adjustment disorder","type":"exact"},{"name":"adjustment reaction","type":"exact"},{"name":"disorder, adjustment","type":"related"},{"name":"disorder, reactive","type":"related"},{"name":"disorders, adjustment","type":"related"},{"name":"disorders, reactive","type":"related"}],"termid":"MONDO:0003265","xrefs":{"Monarch":{"xref_id":"0003265"}}}


id: MONDO:0010044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive spastic paraplegia type 15 is a complex form of hereditary spastic paraplegia characterized by a childhood to adulthood onset of slowly progressive lower limb spasticity (resulting in gait disturbance, extensor plantar responses and decreased vibration sense) associated with mild intellectual disability, mild cerebellar ataxia, peripheral neuropathy (with distal upper limb amyotrophy) and retinal degeneration. Thin corpus callosum is a common imaging finding.","definition_xrefs":["Orphanet:100996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 15","secondary_identifiers":["MESH:C536642","OMIM:270700","MEDGEN:341387","UMLS:C1849128","SCTID:709417000","DOID:0110768","GARD:9581"],"synonyms":[{"name":"Kjellin syndrome","type":"exact"},{"name":"SPG15","type":"exact"},{"name":"ZFYVE26 autosomal recessive complex spastic paraplegia","type":"exact"},{"name":"autosomal recessive complex spastic paraplegia caused by mutation in ZFYVE26","type":"exact"},{"name":"autosomal recessive spastic paraplegia 15","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 15","type":"exact"},{"name":"hereditary spastic paraparesis type 15","type":"exact"},{"name":"hereditary spastic paraplegia 15","type":"exact"},{"name":"hereditary spastic paraplegia type 15","type":"exact"},{"name":"recessive spastic paraplegia with retinal degeneration","type":"related"},{"name":"spastic paraplegia 15","type":"related"},{"name":"spastic paraplegia 15, autosomal recessive","type":"related"},{"name":"spastic paraplegia and retinal Degeneration","type":"related"},{"name":"spastic paraplegia and retinal degeneration","type":"exact"},{"name":"spastic paraplegia-retinal degeneration syndrome","type":"exact"}],"termid":"MONDO:0010044","xrefs":{"Monarch":{"xref_id":"0010044"}}}


id: MONDO:0005652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections caused by viruses of the family arteriviridae.","definition_xrefs":["MESH:D018174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Nidovirales infectious disease","termid":"MONDO:0005876"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arterivirus infectious disease","secondary_identifiers":["EFO:0007152","UMLS:C0206604","MEDGEN:60190"],"synonyms":[{"name":"Arterivirus caused disease or disorder","type":"exact"},{"name":"Arterivirus disease or disorder","type":"exact"}],"termid":"MONDO:0005652","xrefs":{"Monarch":{"xref_id":"0005652"}}}


id: PBO:0015681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 3'-tRNA processing endonuclease tRNAse Z, Trz2","termid":"PBO:0015681"}


id: PBO:0014573
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Insertional Suppressor of Sme2-delta","termid":"PBO:0014573"}


id: GO:0102595
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyanidin 3-O-glucoside-7-O-(6-O-(4-O-(glucosyl)-oxybenzoyl)-glucoside) + 1-O-4-hydroxybenzoyl-beta-D-glucose = cyanidin 3-O-glucoside-7-O-(6-O-(4-O-(6-O-(p-hydroxybenzoyl)-glucosyl)-oxybenzoyl)-glucoside) + beta-D-glucose.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cyanidin 7-O-(6-O-(4-O-(glucosyl)-oxybenzoyl)-glucoside) acyltransferase (acyl-glucose dependent) activity (obsolete GO:0102595)","termid":"GO:0102595"}


id: GO:0032581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of peroxisome organization in which assembly or arrangement of constituent parts takes place in the endoplasmic reticulum.","definition_xrefs":["GOC:mah","PMID:16717127","PMID:17646399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome organization","termid":"GO:0007031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007031"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007031"],"is_obsolete":false,"name":"ER-dependent peroxisome organization","synonyms":[{"name":"ER-dependent peroxisome biogenesis","type":"related"},{"name":"ER-dependent peroxisome organisation","type":"exact"},{"name":"endoplasmic reticulum-dependent peroxisome organization","type":"exact"}],"termid":"GO:0032581"}


id: PBO:0043545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type I alpha 2 chain","termid":"PBO:0043545"}


id: GO:0032181
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a dinucleotide repeat insertion or a deletion resulting in unpaired dinucleotide repeats.","definition_xrefs":["GOC:vk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dinucleotide insertion or deletion binding","termid":"GO:0032139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"dinucleotide repeat insertion binding","termid":"GO:0032181"}


id: PBO:0042522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 2 associated protein 2","termid":"PBO:0042522"}


id: PBO:0069187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 441, pseudogene","termid":"PBO:0069187"}


id: PBO:0028736
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-L-selenoneine_absent_from_cell","termid":"PBO:0028736"}


id: PBO:0061427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 1 group D member 1","termid":"PBO:0061427"}


id: GO:1903794
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to cortisol.","definition_xrefs":["PMID:18483153","GO_REF:0000067","GOC:TermGenie","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"},{"relation_name":"is_a","term_name":"steroid hormone binding","termid":"GO:1990239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008289"],"is_obsolete":false,"name":"cortisol binding","termid":"GO:1903794"}


id: PR:Q9USL1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A THO complex subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR22839:SF0","PRO:DNx","OMA:SCHPO04432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C18B5.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18B5.10c","secondary_identifiers":["UniProtKB:Q9USL1"],"synonyms":[{"name":"Spom972h-THOC3","type":"exact"}],"termid":"PR:Q9USL1"}


id: GO:0010966
data:
  {"annotated_genes":["SJAG_04990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000185"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphate transport. Phosphate transport is the directed movement of phosphate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"phosphate ion transport","termid":"GO:0006817"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of phosphate transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010966","terms_by_termid":{"GO:2000185":null}}


id: PBO:0079326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 14","termid":"PBO:0079326"}


id: GO:1905223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process by which an epicardium is generated and organized.","definition_xrefs":["GOC:rl","GO_REF:0000083","GOC:TermGenie","PMID:18718461","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epicardium morphogenesis","synonyms":[{"name":"heart epicardium morphogenesis","type":"exact"},{"name":"pericardium visceral mesothelium morphogenesis","type":"related"},{"name":"visceral serous pericardium of heart morphogenesis","type":"exact"},{"name":"visceral serous pericardium proper morphogenesis","type":"exact"}],"termid":"GO:1905223"}


id: GO:0030037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cell cycle process in which rearrangement of the spatial distribution of actin filaments and associated proteins occurs.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete actin filament reorganization involved in cell cycle (obsolete GO:0030037)","synonyms":[{"name":"actin filament reorganisation involved in cell cycle","type":"exact"},{"name":"actin filament reorganization during cell cycle","type":"related"}],"termid":"GO:0030037"}


id: MONDO:0030498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive primary immunodeficiency characterized by the onset of recurrent infections in infancy or early childhood. Infectious agents are broad, including bacterial, viral, fungal, and parasitic, including Cryptosporidium and Mycobacteria. Patient lymphocytes show defects in both T- and B-cell proliferation, cytokine secretion, and overall function, and there is also evidence of dysfunction of NK, certain antigen-presenting cells, and myeloid subsets. Hematopoietic stem cell transplantation may be curative.","definition_xrefs":["OMIM:619652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 92","secondary_identifiers":["MEDGEN:1794249","UMLS:C5562039"],"synonyms":[{"name":"IMD92","type":"exact"},{"name":"immunodeficiency due to REL deficiency","type":"exact"}],"termid":"MONDO:0030498","xrefs":{"Monarch":{"xref_id":"0030498"}}}


id: PBO:0035735
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_trimethylation_at_centromere_during_vegetative_growth","termid":"PBO:0035735"}


id: MONDO:0000902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Corpus callosum agenesis-neuropathy is a neurodegenerative disorder characterized by severe progressive sensorimotor neuropathy beginning in infancy with resulting hypotonia, areflexia, amyotrophy and variable degrees of dysgenesis of the corpus callosum. Additional features include mild-to-severe intellectual and developmental delays, and psychiatric manifestations that include paranoid delusions, depression, hallucinations, and \\\"autistic-like\\\" features. Affected individuals are usually wheelchair restricted in the second decade of life and die in the third decade of life. The disease is inherited as an autosomal recessive trait.","definition_xrefs":["Orphanet:1496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"agenesis of the corpus callosum with peripheral neuropathy","secondary_identifiers":["MESH:C536446","DOID:0090003","DOID:0060600","OMIM:218000","SCTID:702439002","MEDGEN:162893","UMLS:C0795950","GARD:1537"],"synonyms":[{"name":"ACCPN","type":"related"},{"name":"Andermann syndrome","type":"exact"},{"name":"Charlevoix disease","type":"exact"},{"name":"HMSN/ACC","type":"related"},{"name":"agenesis of corpus callosum with neuronopathy","type":"related"},{"name":"agenesis of corpus callosum with peripheral neuropathy","type":"related"},{"name":"agenesis of corpus callosum with polyneuropathy","type":"related"},{"name":"agenesis of the corpus callosum with peripheral neuropathy","type":"exact"},{"name":"corpus callosum agenesis neuronopathy","type":"related"},{"name":"corpus callosum agenesis-neuronopathy syndrome","type":"exact"},{"name":"corpus callosum, agenesis of, with neuronopathy","type":"related"},{"name":"hereditary motor and sensory neuropathy with agenesis of the corpus callosum","type":"exact"},{"name":"peripheral neuropathy associated with agenesis of the corpus callosum","type":"exact"},{"name":"polyneuropathy, sensorimotor, with or without agenesis of the corpus callosum","type":"related"}],"termid":"MONDO:0000902","xrefs":{"Monarch":{"xref_id":"0000902"}}}


id: PBO:0061810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 centriole and centriolar satellite protein","termid":"PBO:0061810"}


id: PBO:0062493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily B member 9 pseudogene","termid":"PBO:0062493"}


id: MONDO:0060732
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tetraamelia-multiple malformations syndrome","termid":"MONDO:0010110"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"tetraamelia syndrome 2","secondary_identifiers":["OMIM:618021","DOID:0112193","GARD:16286","MEDGEN:1648284","UMLS:C4747923"],"synonyms":[{"name":"TETAMS2","type":"related"},{"name":"tetraamelia syndrome 2","type":"exact"},{"name":"tetraamelia syndrome 2 with pulmonary agenesis","type":"related"}],"termid":"MONDO:0060732","xrefs":{"Monarch":{"xref_id":"0060732"}}}


id: PBO:0075342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sortilin related receptor 1","termid":"PBO:0075342"}


id: PBO:0056329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 10","termid":"PBO:0056329"}


id: PBO:0051833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon regulatory factor 7","termid":"PBO:0051833"}


id: PBO:0043997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorionic somatomammotropin hormone 2","termid":"PBO:0043997"}


id: MONDO:0019950
data:
  {"annotated_genes":["SJAG_04316","SJAG_02103","SJAG_04053","SJAG_02096","SJAG_01491","SJAG_03188","SJAG_05219","SJAG_00831","SJAG_00804","SJAG_01918"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012248"},{"annotations":[86154,86153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013162"},{"annotations":[85435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014142"},{"annotations":[84777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014023"},{"annotations":[85619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014896"},{"annotations":[84649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013049"},{"annotations":[85836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011246"},{"annotations":[85246,85247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009682"},{"annotations":[85342,85341,85340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009364"},{"annotations":[85428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014140"},{"annotations":[86148,86147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013154"},{"annotations":[84737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033556"},{"annotations":[86152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013159"},{"annotations":[85433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014141"},{"annotations":[86150,86151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013160"}]},"cv_name":"mondo","definition":"A muscular dystrophy that is characterized by diminished muscle tone (hypotonia), progressive muscle weakness and degeneration (atrophy), abnormally fixed joints, spinal rigidity, and delays in reaching motor milestones such as sitting or standing unassisted.","definition_xrefs":["DOID:0050557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"muscular dystrophy","termid":"MONDO:0020121"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00804":null,"SJAG_00831":null,"SJAG_01491":null,"SJAG_01918":null,"SJAG_02096":null,"SJAG_02103":null,"SJAG_03188":null,"SJAG_04053":null,"SJAG_04316":null,"SJAG_05219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"congenital muscular dystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:359.0","MEDGEN:147063","Orphanet:97242","SCTID:240059009","UMLS:C0699743","GARD:9138","icd11.foundation:396687076"],"synonyms":[{"name":"CMD","type":"exact"},{"name":"MDC","type":"exact"},{"name":"congenital MD","type":"related"}],"termid":"MONDO:0019950","terms_by_termid":{"MONDO:0009364":null,"MONDO:0009682":null,"MONDO:0011246":null,"MONDO:0012248":null,"MONDO:0013049":null,"MONDO:0013154":null,"MONDO:0013159":null,"MONDO:0013160":null,"MONDO:0013162":null,"MONDO:0014023":null,"MONDO:0014140":null,"MONDO:0014141":null,"MONDO:0014142":null,"MONDO:0014896":null,"MONDO:0033556":null},"xrefs":{"Monarch":{"xref_id":"0019950"}}}


id: GO:1903705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of siRNA processing.","definition_xrefs":["GOC:TermGenie","GOC:BHF","PMID:19701182","GO_REF:0000058","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of siRNA processing","termid":"GO:0070921"},{"relation_name":"positively_regulates","term_name":"siRNA processing","termid":"GO:0030422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of siRNA processing","synonyms":[{"name":"activation of RNA interference, production of guide RNAs","type":"narrow"},{"name":"activation of RNA interference, production of siRNA","type":"narrow"},{"name":"activation of production of guide RNAs involved in RNA interference","type":"narrow"},{"name":"activation of production of siRNA involved in RNA interference","type":"narrow"},{"name":"positive regulation of RNA interference, production of guide RNAs","type":"exact"},{"name":"positive regulation of RNA interference, production of siRNA","type":"exact"},{"name":"positive regulation of production of guide RNAs involved in RNA interference","type":"exact"},{"name":"positive regulation of production of siRNA involved in PTGS","type":"exact"},{"name":"positive regulation of production of siRNA involved in RNA interference","type":"exact"},{"name":"positive regulation of production of siRNA involved in post-transcriptional gene silencing by RNA","type":"related"},{"name":"positive regulation of siRNA production","type":"related"},{"name":"up regulation of RNA interference, production of guide RNAs","type":"exact"},{"name":"up regulation of RNA interference, production of siRNA","type":"exact"},{"name":"up regulation of production of guide RNAs involved in RNA interference","type":"exact"},{"name":"up regulation of production of siRNA involved in RNA interference","type":"exact"},{"name":"up-regulation of RNA interference, production of guide RNAs","type":"exact"},{"name":"up-regulation of RNA interference, production of siRNA","type":"exact"},{"name":"up-regulation of production of guide RNAs involved in RNA interference","type":"exact"},{"name":"up-regulation of production of siRNA involved in RNA interference","type":"exact"},{"name":"upregulation of RNA interference, production of guide RNAs","type":"exact"},{"name":"upregulation of RNA interference, production of siRNA","type":"exact"},{"name":"upregulation of production of guide RNAs involved in RNA interference","type":"exact"},{"name":"upregulation of production of siRNA involved in RNA interference","type":"exact"}],"termid":"GO:1903705"}


id: PBO:0073577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shisa family member 8","termid":"PBO:0073577"}


id: GO:0033553
data:
  {"annotated_genes":["SJAG_03680","SJAG_01075","SJAG_02778","SJAG_04855","SJAG_03780","SJAG_00768","SJAG_04039","SJAG_01867","SJAG_01332","SJAG_04142","SJAG_01745","SJAG_04186","SJAG_01873","SJAG_03982","SJAG_01067","SJAG_00934","SJAG_03844","SJAG_03942","SJAG_02119"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89524,90823,91272,91346,91553,101776,103686,105792,107644,110707,111593,112002,112782,113478,113912,116022,116358,117206,118311],"is_not":false,"summary":null,"term":"GO:0033553"}]},"cv_name":"cellular_component","definition":"A region of heterochromatin located at the rDNA repeats in a chromosome.","definition_xrefs":["GOC:mah","PMID:20661445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin","termid":"GO:0000792"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00768":null,"SJAG_00934":null,"SJAG_01067":null,"SJAG_01075":null,"SJAG_01332":null,"SJAG_01745":null,"SJAG_01867":null,"SJAG_01873":null,"SJAG_02119":null,"SJAG_02778":null,"SJAG_03680":null,"SJAG_03780":null,"SJAG_03844":null,"SJAG_03942":null,"SJAG_03982":null,"SJAG_04039":null,"SJAG_04142":null,"SJAG_04186":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"rDNA heterochromatin","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1902377"],"synonyms":[{"name":"nuclear rDNA heterochromatin","type":"narrow"},{"name":"ribosomal DNA heterochromatin","type":"exact"},{"name":"ribosomal DNA heterochromatin of cell nucleus","type":"narrow"},{"name":"ribosomal DNA heterochromatin of nucleus","type":"narrow"}],"termid":"GO:0033553","terms_by_termid":{"GO:0033553":null}}


id: PBO:0029210
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_dTTP_level","termid":"PBO:0029210"}


id: GO:0032739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-16 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-16 production","termid":"GO:0032659"},{"relation_name":"positively_regulates","term_name":"interleukin-16 production","termid":"GO:0032619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-16 production","secondary_identifiers":["GO:0045377"],"synonyms":[{"name":"activation of interleukin-16 production","type":"narrow"},{"name":"positive regulation of IL-16 production","type":"exact"},{"name":"positive regulation of interleukin-16 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-16 production","type":"narrow"},{"name":"up regulation of interleukin-16 production","type":"exact"},{"name":"up-regulation of interleukin-16 production","type":"exact"},{"name":"upregulation of interleukin-16 production","type":"exact"}],"termid":"GO:0032739"}


id: PBO:0071049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 51","termid":"PBO:0071049"}


id: MONDO:0011413
data:
  {"annotated_genes":["SJAG_04567","SJAG_02919","SJAG_03815"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84877,84878,84879],"is_not":false,"summary":null,"term":"MONDO:0011413"}]},"cv_name":"mondo","definition":"Any cataract (disease) in which the cause of the disease is a mutation in the CRYAA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"},{"relation_name":"excluded_subClassOf","term_name":"cataract - microcornea syndrome","termid":"MONDO:0015300"},{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02919":null,"SJAG_03815":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 9 multiple types","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110266","GARD:15364","OMIM:604219","UMLS:C1858679","MEDGEN:347693"],"synonyms":[{"name":"CATC1","type":"narrow"},{"name":"CRYAA cataract (disease)","type":"exact"},{"name":"CTRCT9","type":"exact"},{"name":"autosomal recessive congenital cataract 1","type":"narrow"},{"name":"cataract (disease) caused by mutation in CRYAA","type":"exact"},{"name":"cataract 9 multiple types with or without microcornea","type":"exact"},{"name":"cataract 9, multiple types","type":"related"},{"name":"cataract 9, multiple types, with or without microcornea","type":"related"},{"name":"cataract, autosomal dominant","type":"related"},{"name":"cataract, autosomal recessive congenital 1","type":"related"}],"termid":"MONDO:0011413","terms_by_termid":{"MONDO:0011413":null},"xrefs":{"Monarch":{"xref_id":"0011413"}}}


id: GO:1903147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitochondrion degradation by autophagy.","definition_xrefs":["GOC:TermGenie","GOC:autophagy","GO_REF:0000058","GOC:PARL","GOC:bf","PMID:24600391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of autophagy","termid":"GO:0010507"},{"relation_name":"is_a","term_name":"regulation of autophagy of mitochondrion","termid":"GO:1903146"},{"relation_name":"negatively_regulates","term_name":"autophagy of mitochondrion","termid":"GO:0000422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"negative regulation of autophagy of mitochondrion","synonyms":[{"name":"down regulation of mitochondrial degradation","type":"broad"},{"name":"down regulation of mitochondrion degradation","type":"broad"},{"name":"down-regulation of mitochondrion degradation","type":"broad"},{"name":"down-regulation of mitophagy","type":"broad"},{"name":"downregulation of mitochondrion degradation","type":"broad"},{"name":"inhibition of mitochondrion degradation","type":"related"},{"name":"inhibition of mitophagy","type":"narrow"}],"termid":"GO:1903147"}


id: PBO:0061716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUTM2A antisense RNA 1","termid":"PBO:0061716"}


id: MONDO:0019040
data:
  {"annotated_genes":["SJAG_01548","SJAG_03436","SJAG_02846","SJAG_01286","SJAG_04884","SJAG_01806","SJAG_03898","SJAG_01804","SJAG_02231","SJAG_01465","SJAG_00441","SJAG_04324","SJAG_02317","SJAG_02795","SJAG_03244","SJAG_00213","SJAG_03424","SJAG_00786","SJAG_01082","SJAG_02035","SJAG_03635","SJAG_00112","SJAG_04699","SJAG_03286","SJAG_04663"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859575"},{"annotations":[85102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859576"},{"annotations":[86476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008876"},{"annotations":[85645,85644,85646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013256"},{"annotations":[86272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011402"},{"annotations":[86268,86269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009759"},{"annotations":[85417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013582"},{"annotations":[85100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859346"},{"annotations":[85209,85210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007925"},{"annotations":[85042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012574"},{"annotations":[85758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010334"},{"annotations":[85471,85472,85477,85475,85474,85476,85473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010767"},{"annotations":[85117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014848"},{"annotations":[86618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008644"},{"annotations":[85094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008684"}]},"cv_name":"mondo","definition":"Clinical conditions caused by an abnormal chromosome constitution in which there is extra or missing chromosome material (either a whole chromosome or a chromosome segment). (from Thompson et al., Genetics in Medicine, 5th ed, p429)","definition_xrefs":["MESH:D025063"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00112":null,"SJAG_00213":null,"SJAG_00441":null,"SJAG_00786":null,"SJAG_01082":null,"SJAG_01286":null,"SJAG_01465":null,"SJAG_01548":null,"SJAG_01804":null,"SJAG_01806":null,"SJAG_02035":null,"SJAG_02231":null,"SJAG_02317":null,"SJAG_02795":null,"SJAG_02846":null,"SJAG_03244":null,"SJAG_03286":null,"SJAG_03424":null,"SJAG_03436":null,"SJAG_03635":null,"SJAG_03898":null,"SJAG_04324":null,"SJAG_04663":null,"SJAG_04699":null,"SJAG_04884":null},"genotype_count":0,"is_obsolete":false,"name":"chromosomal disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:3441","UMLS:C0008626","NANDO:2100279","ICD10CM:Q90-Q99","NANDO:1100014","ICD9:758.89","NANDO:2100280","DOID:0080014","NCIT:C34470","Orphanet:68335","SCTID:409709004"],"synonyms":[{"name":"autosomal chromosome disorder","type":"related"},{"name":"autosomal chromosome disorders","type":"related"},{"name":"chromosomal disease","type":"exact"},{"name":"chromosomal disorder","type":"exact"},{"name":"chromosomal disorders","type":"exact"},{"name":"chromosome abnormality disorder","type":"related"},{"name":"chromosome abnormality disorders","type":"related"},{"name":"chromosome disorder","type":"exact"},{"name":"chromosome disorder, autosomal","type":"related"},{"name":"chromosome disorders, autosomal","type":"related"},{"name":"disorder, chromosomal","type":"exact"},{"name":"disorder, chromosome","type":"exact"},{"name":"disorder, chromosome abnormality","type":"related"},{"name":"disorders, chromosomal","type":"exact"},{"name":"disorders, chromosome","type":"exact"}],"termid":"MONDO:0019040","terms_by_termid":{"MONDO:0007925":null,"MONDO:0008644":null,"MONDO:0008684":null,"MONDO:0008876":null,"MONDO:0009759":null,"MONDO:0010334":null,"MONDO:0010767":null,"MONDO:0011402":null,"MONDO:0012574":null,"MONDO:0013256":null,"MONDO:0013582":null,"MONDO:0014848":null,"MONDO:0859346":null,"MONDO:0859575":null,"MONDO:0859576":null},"xrefs":{"Monarch":{"xref_id":"0019040"}}}


id: GO:0009079
data:
  {"annotated_genes":["SJAG_00396","SJAG_03243","SJAG_04098","SJAG_03985","SJAG_02841","SJAG_03562","SJAG_04149","SJAG_06635"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112748,105673,109927,100323,102796,90167,109569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009098"},{"annotations":[102797,90168,110587,109928,112749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009099"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any amino acid that requires pyruvate for its synthesis, e.g. alanine.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate family amino acid metabolic process","termid":"GO:0009078"},{"relation_name":"is_a","term_name":"L-amino acid biosynthetic process","termid":"GO:0170034"},{"relation_name":"is_a","term_name":"proteinogenic amino acid biosynthetic process","termid":"GO:0170038"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00396":null,"SJAG_02841":null,"SJAG_03243":null,"SJAG_03562":null,"SJAG_03985":null,"SJAG_04098":null,"SJAG_04149":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"pyruvate family amino acid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyruvate family amino acid anabolism","type":"exact"},{"name":"pyruvate family amino acid biosynthesis","type":"exact"},{"name":"pyruvate family amino acid formation","type":"exact"},{"name":"pyruvate family amino acid synthesis","type":"exact"}],"termid":"GO:0009079","terms_by_termid":{"GO:0009098":null,"GO:0009099":null}}


id: PBO:0055393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2823","termid":"PBO:0055393"}


id: PBO:0065611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTP4A1 pseudogene 5","termid":"PBO:0065611"}


id: PBO:0051861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly 2","termid":"PBO:0051861"}


id: SOFP:readthrough_stop_codon
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"readthrough_stop_codon","termid":"SOFP:readthrough_stop_codon"}


id: PBO:0038303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase chadoprop types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"date_version","termid":"PBO:0038303"}


id: PBO:0090824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Nnk1","termid":"PBO:0090824"}


id: PBO:0066390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reeler domain containing 1","termid":"PBO:0066390"}


id: MONDO:0014918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tall stature-intellectual disability-renal anomalies syndrome","secondary_identifiers":["GARD:17921","MEDGEN:934682","OMIM:617107","Orphanet:500095","UMLS:C4310715"],"synonyms":[{"name":"THAUVIN-robinet-Faivre syndrome","type":"related"},{"name":"TROFAS","type":"exact"},{"name":"Thauvin-robinet-Faivre syndrome","type":"exact"}],"termid":"MONDO:0014918","xrefs":{"Monarch":{"xref_id":"0014918"}}}


id: PBO:0052375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 19B, pseudogene","termid":"PBO:0052375"}


id: GO:0000811
data:
  {"annotated_genes":["SJAG_00536","SJAG_00696","SJAG_00874","SJAG_01624"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92465,111388,112646,112975],"is_not":false,"summary":null,"term":"GO:0000811"}]},"cv_name":"cellular_component","definition":"A heterotetrameric protein complex that associates with replication origins, where it is required for the initiation of DNA replication, and with replication forks.","definition_xrefs":["PMID:12730134","PMID:16990792","GOC:rn","GOC:rb","PMID:17467990"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication preinitiation complex","termid":"GO:0031261"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00536":null,"SJAG_00696":null,"SJAG_00874":null,"SJAG_01624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0005654","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"GINS complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Go, Ichi, Ni and San complex","type":"exact"}],"termid":"GO:0000811","terms_by_termid":{"GO:0000811":null}}


id: PBO:0075393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sp6 transcription factor","termid":"PBO:0075393"}


id: PBO:0036411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H and G-patch domain protein Sqs1 (predicted)","termid":"PBO:0036411"}


id: GO:0010811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of cell-substrate adhesion. Cell-substrate adhesion is the attachment of a cell to the underlying substrate via adhesion molecules.","definition_xrefs":["GOC:dph","GOC:pf","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-substrate adhesion","termid":"GO:0010810"},{"relation_name":"is_a","term_name":"positive regulation of cell adhesion","termid":"GO:0045785"},{"relation_name":"positively_regulates","term_name":"cell-substrate adhesion","termid":"GO:0031589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of cell-substrate adhesion","termid":"GO:0010811"}


id: PBO:0038631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminocarboxymuconate semialdehyde decarboxylase","termid":"PBO:0038631"}


id: FYPO:0005149
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is shaped in the form of a spheroid and has one or more septa.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"spheroid vegetative cell","termid":"FYPO:0000021"},{"relation_name":"has_part","term_name":"septated vegetative cell","termid":"FYPO:0002342"},{"relation_name":"is_a","term_name":"spheroid vegetative cell","termid":"FYPO:0000021"},{"relation_name":"is_a","term_name":"septated vegetative cell","termid":"FYPO:0002342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"septated spheroid vegetative cell","synonyms":[{"name":"septated rounded vegetative cell","type":"exact"}],"termid":"FYPO:0005149"}


id: PBO:0039034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 11","termid":"PBO:0039034"}


id: PBO:0059937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 23","termid":"PBO:0059937"}


id: PBO:0056865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated monooxygenase, calponin and LIM domain containing 1","termid":"PBO:0056865"}


id: GO:0042863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the siderochrome pyochelin (2-(2-o-hydroxyphenyl-2-thiazolin-4-yl)-3-methylthiazolidine-4-carboxylic acid).","definition_xrefs":["PMID:6794030","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"siderophore metabolic process","termid":"GO:0009237"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748","GO:0006790"],"is_obsolete":false,"name":"pyochelin metabolic process","synonyms":[{"name":"pyochelin metabolism","type":"exact"}],"termid":"GO:0042863"}


id: PBO:0089948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA repair protein","termid":"PBO:0089948"}


id: GO:1904116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vasopressin stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:22811487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptide hormone","termid":"GO:0043434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to vasopressin","termid":"GO:1904116"}


id: PBO:0034209
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-differs_in_attribute_of","termid":"PBO:0034209"}


id: MONDO:1012053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital copper deficiency, non-human animal","termid":"MONDO:1011838"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital copper deficiency, goat","secondary_identifiers":["OMIA:000226-9925"],"termid":"MONDO:1012053","xrefs":{"Monarch":{"xref_id":"1012053"}}}


id: PBO:0084511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of an oxysterol-binding protein family; this family has seven members in S. cerevisiae; family members have overlapping, redundant functions in sterol metabolism and collectively perform a function essential for viability; contains FFAT motif; interacts with ER anchor Scs2p at patches at the plasma membrane; regulated by sterol binding","termid":"PBO:0084511"}


id: GO:0018234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The thioether cross-linking of a cysteine residue to a tyrosine residue to form 3'-(S-L-cysteinyl)-L-tyrosine, found in galactose oxidase.","definition_xrefs":["RESID:AA0113"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 3'-(S-L-cysteinyl)-L-tyrosine (obsolete GO:0018234)","termid":"GO:0018234"}


id: FYECO:0000292
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were first nitrogen starved at standard growth temperature, and then transferred to a rich medium at high temperature.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrogen starvation at normal temperature and shift to high temperature in rich medium","termid":"FYECO:0000292"}


id: PBO:0058907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12125","termid":"PBO:0058907"}


id: GO:0062224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of somatic muscle development.","definition_xrefs":["PMID:16643882","PMID:25758712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of somatic muscle development","termid":"GO:0062223"},{"relation_name":"positively_regulates","term_name":"somatic muscle development","termid":"GO:0007525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of somatic muscle development","termid":"GO:0062224"}


id: PBO:0089332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSP chaperone complex subunit Cns1","termid":"PBO:0089332"}


id: PBO:0087452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a complex with Ctf18p; shares some subunits with Replication Factor C; required for sister chromatid cohesion","termid":"PBO:0087452"}


id: PBO:0055024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2439","termid":"PBO:0055024"}


id: GO:0019428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of allantoin, (2,5-dioxo-4-imidazolidinyl)urea.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allantoin metabolic process","termid":"GO:0000255"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"allantoin biosynthetic process","secondary_identifiers":["MetaCyc:URSIN-PWY"],"synonyms":[{"name":"allantoin anabolism","type":"exact"},{"name":"allantoin biosynthesis","type":"exact"},{"name":"allantoin formation","type":"exact"},{"name":"allantoin synthesis","type":"exact"}],"termid":"GO:0019428"}


id: FYPO:0004425
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the phosphorylation of threonine residues in one or more specific proteins, or of specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abolished protein threonine phosphorylation (obsolete FYPO:0004425)","synonyms":[{"name":"abolished peptidyl-threonine phosphorylation","type":"exact"},{"name":"protein threonine phosphorylation abolished","type":"exact"}],"termid":"FYPO:0004425"}


id: MONDO:0013314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the IMPG2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"IMPG2-related recessive retinopathy","termid":"MONDO:0700241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 56","secondary_identifiers":["OMIM:613581","DOID:0110371","MEDGEN:462169","UMLS:C3150819","GARD:15678","ICD10CM:H35.5"],"synonyms":[{"name":"IMPG2 retinitis pigmentosa","type":"exact"},{"name":"RP56","type":"exact"},{"name":"maculopathy, Impg2-related","type":"related"},{"name":"retinitis pigmentosa 56","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in IMPG2","type":"exact"},{"name":"retinitis pigmentosa type 56","type":"exact"}],"termid":"MONDO:0013314","xrefs":{"Monarch":{"xref_id":"0013314"}}}


id: PATO:0001566
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's being spread out or scattered about or divided up.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distributed","secondary_identifiers":["PATO:0001513"],"synonyms":[{"name":"diffuse","type":"exact"},{"name":"scattered","type":"exact"}],"termid":"PATO:0001566"}


id: MONDO:0100205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with parainfluenza virus type 4.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent","PMID:21636318","PMID:27197630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parainfluenza infectious disease","termid":"MONDO:0100197"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parainfluenza virus type 4 infectious disease","synonyms":[{"name":"human rubulavirus 4 infectious disease","type":"exact"},{"name":"infection caused by human parainfluenza virus 4","type":"exact"},{"name":"infection caused by parainfluenza virus 4","type":"related"},{"name":"infection due to human parainfluenza virus 4","type":"exact"},{"name":"infection due to parainfluenza virus 4","type":"related"}],"termid":"MONDO:0100205","xrefs":{"Monarch":{"xref_id":"0100205"}}}


id: PBO:0090469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V1 subunit F","termid":"PBO:0090469"}


id: MONDO:0001774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"scleritis","termid":"MONDO:0001718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"posterior scleritis","secondary_identifiers":["icd11.foundation:982348440","ICD9:379.07","SCTID:267660007","DOID:13676","MEDGEN:509932","UMLS:C0155357"],"termid":"MONDO:0001774","xrefs":{"Monarch":{"xref_id":"0001774"}}}


id: MONDO:0100555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing IgA glomerulonephritis.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IgA nephropathy, susceptibility to","secondary_identifiers":["OMIMPS:161950"],"termid":"MONDO:0100555","xrefs":{"Monarch":{"xref_id":"0100555"}}}


id: PBO:0004776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup120","termid":"PBO:0004776"}


id: PBO:0051249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-5-1 (pseudogene)","termid":"PBO:0051249"}


id: PBO:0038544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 16A, phospholipase","termid":"PBO:0038544"}


id: PBO:0088101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Urea amidolyase; contains both urea carboxylase and allophanate hydrolase activities, degrades urea to CO2 and NH3; expression sensitive to nitrogen catabolite repression and induced by allophanate, an intermediate in allantoin degradation; protein abundance increases in response to DNA replication stress","termid":"PBO:0088101"}


id: PBO:0048170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2E3 pseudogene 1","termid":"PBO:0048170"}


id: GO:0043379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a newly activated T cell acquires specialized features of a memory T cell.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell differentiation involved in immune response","termid":"GO:0002292"},{"relation_name":"is_a","term_name":"immunological memory formation process","termid":"GO:0090715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"memory T cell differentiation","synonyms":[{"name":"memory T cell development","type":"related"},{"name":"memory T lymphocyte differentiation","type":"exact"},{"name":"memory T-cell differentiation","type":"exact"},{"name":"memory T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0043379"}


id: FYECO:0000197
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which nickel was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited nickel","termid":"FYECO:0000197"}


id: PBO:0045663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dymeclin","termid":"PBO:0045663"}


id: PBO:0043841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceramide-1-phosphate transfer protein","termid":"PBO:0043841"}


id: SO:1000058
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA point mutation that causes a substitution of an amino acid by an other.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000058 sequence_variant_causing_non_synonymous_codon_change_in_transcript (obsolete SO:1000058)","synonyms":[{"name":"mutation causing non synonymous codon change in transcript","type":"related"},{"name":"non-synonymous codon change in transcript","type":"exact"},{"name":"sequence variant causing non synonymous codon change in transcript","type":"exact"}],"termid":"SO:1000058"}


id: MONDO:0016700
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anaplastic ependymoma is a rare, malignant type of ependymoma that most often arises in the supratentorial region of the brain of children and young adults and that manifests with variable symptoms including headaches, nausea, vision impairment, memory loss and difficulty walking.","definition_xrefs":["Orphanet:251646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ependymal tumor","termid":"MONDO:0003266"},{"relation_name":"is_a","term_name":"anaplastic cancer","termid":"MONDO:0020633"},{"relation_name":"is_a","term_name":"grade III glioma","termid":"MONDO:0021640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"anaplastic ependymoma","secondary_identifiers":["ONCOTREE:APE","ICDO:9392/3","DOID:5074","DOID:5889","NCIT:C6770","NCIT:C4049","MEDGEN:128891","UMLS:C0280788","GARD:10634","MedDRA:10014968"],"synonyms":[{"name":"WHO grade III ependymal neoplasm","type":"exact"},{"name":"WHO grade III ependymal tumor","type":"exact"},{"name":"WHO grade III ependymal tumour","type":"exact"},{"name":"anaplastic ependymal neoplasm","type":"exact"},{"name":"anaplastic ependymal tumor","type":"exact"},{"name":"anaplastic ependymal tumour","type":"exact"},{"name":"anaplastic ependymoma","type":"exact"},{"name":"ependymal tumors","type":"broad"},{"name":"ependymal tumours","type":"broad"},{"name":"ependymoma, anaplastic, malignant","type":"exact"},{"name":"ependymoma, malignant","type":"exact"},{"name":"high-grade ependymoma","type":"exact"},{"name":"malignant ependymoma","type":"exact"},{"name":"undifferentiated ependymal neoplasm","type":"exact"},{"name":"undifferentiated ependymal tumor","type":"exact"},{"name":"undifferentiated ependymal tumour","type":"exact"},{"name":"undifferentiated ependymoma","type":"exact"}],"termid":"MONDO:0016700","xrefs":{"Monarch":{"xref_id":"0016700"}}}


id: MONDO:0021718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of several peripheral nerves.","definition_xrefs":["NCIT:C26864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyneuropathy","termid":"MONDO:0001824"},{"relation_name":"is_a","term_name":"neuritis","termid":"MONDO:0002122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"polyneuritis","secondary_identifiers":["MEDGEN:46005","UMLS:C0032541","SCTID:76886005","GTR:AN1355640","HP:0031003","GTR:AN1353837"],"synonyms":[{"name":"Inflammatory polyneuropathy","type":"related"},{"name":"Multiple neuritis","type":"related"},{"name":"Polyneuritides","type":"related"},{"name":"Polyneuritis","type":"related"},{"name":"inflammatory polyneuropathy","type":"related"},{"name":"polyneuritis","type":"exact"}],"termid":"MONDO:0021718","xrefs":{"Monarch":{"xref_id":"0021718"}}}


id: GO:0033242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways leading to the breakdown of amines.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of amine metabolic process","termid":"GO:0033239"},{"relation_name":"is_a","term_name":"regulation of amine catabolic process","termid":"GO:0033241"},{"relation_name":"negatively_regulates","term_name":"amine catabolic process","termid":"GO:0009310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of amine catabolic process","synonyms":[{"name":"negative regulation of amine breakdown","type":"exact"},{"name":"negative regulation of amine catabolism","type":"exact"},{"name":"negative regulation of amine degradation","type":"exact"},{"name":"negative regulation of cellular amine catabolic process","type":"exact"}],"termid":"GO:0033242"}


id: PBO:0063910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma","termid":"PBO:0063910"}


id: FYPO:0003267
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of acid phosphatase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phosphatase activity","termid":"FYPO:0004469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal acid phosphatase activity","termid":"FYPO:0003267"}


id: MONDO:0012625
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the NR2E3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 37","secondary_identifiers":["ICD10CM:H35.5","DOID:0110399","GARD:15508","MESH:C567005","MEDGEN:410004","OMIM:611131","UMLS:C1970163"],"synonyms":[{"name":"NR2E3 retinitis pigmentosa","type":"exact"},{"name":"RP37","type":"exact"},{"name":"retinitis pigmentosa 37","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in NR2E3","type":"exact"},{"name":"retinitis pigmentosa type 37","type":"exact"}],"termid":"MONDO:0012625","xrefs":{"Monarch":{"xref_id":"0012625"}}}


id: PBO:0026650
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_binding_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0026650"}


id: PBO:0043312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 4 pseudogene 1","termid":"PBO:0043312"}


id: MONDO:0859522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 81","secondary_identifiers":["MEDGEN:1840965","UMLS:C5830329","OMIM:620277","DOID:0070580"],"termid":"MONDO:0859522","xrefs":{"Monarch":{"xref_id":"0859522"}}}


id: PBO:0071319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27a pseudogene 3","termid":"PBO:0071319"}


id: PR:O14304
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9G1.08c gene.","definition_xrefs":["UniProtKB:O14304","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized hydrolase C9G1.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.08c","synonyms":[{"name":"Spom972h-SPAC9G1.08c","type":"exact"}],"termid":"PR:O14304"}


id: FYPO:0003015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell lyses, i.e. the plasma membrane ruptures and cytoplasm is lost, during a cellular response to salt stress. Note that in fission yeast cell lysis, the integrity of the cell wall is also compromised.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell lysis","termid":"FYPO:0000647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"cell lysis during cellular response to salt stress","synonyms":[{"name":"cell lysis during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"cell lysis during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"cytolysis during cellular response to salt stress","type":"exact"},{"name":"inviable, lysed cell during cellular response to salt stress","type":"exact"},{"name":"lysed cell in response to salt stress","type":"exact"}],"termid":"FYPO:0003015"}


