# terms

id: GO:0032350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving any hormone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hormone levels","termid":"GO:0010817"},{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hormone metabolic process","synonyms":[{"name":"regulation of hormone metabolism","type":"exact"}],"termid":"GO:0032350"}


id: MONDO:0003674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An electrocardiographic finding of an injury in leads corresponding to the anatomic region of the subendocardial layer of the wall of the heart.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myocardial infarction","termid":"MONDO:0005068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"subendocardial myocardial infarction","secondary_identifiers":["UMLS:C0262568","DOID:5849","MEDGEN:75500"],"synonyms":[{"name":"myocardial infarction (disease) of subendocardium layer","type":"exact"},{"name":"subendocardium layer myocardial infarction (disease)","type":"exact"}],"termid":"MONDO:0003674","xrefs":{"Monarch":{"xref_id":"0003674"}}}


id: PBO:0038800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 6 (pseudogene)","termid":"PBO:0038800"}


id: PBO:0078329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon CTC) 1-1","termid":"PBO:0078329"}


id: GO:0036173
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a thiosulfate, a sulfur oxide that has formula O3S2.","definition_xrefs":["GOC:db","PMID:2188959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"thiosulfate binding","termid":"GO:0036173"}


id: GO:0060530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a smooth muscle cell of the prostate glandular acinus.","definition_xrefs":["GOC:dph","PMID:18977204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"smooth muscle cell differentiation","termid":"GO:0051145"},{"relation_name":"part_of","term_name":"prostate glandular acinus development","termid":"GO:0060525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle cell differentiation involved in prostate glandular acinus development","termid":"GO:0060530"}


id: PBO:0058322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4695","termid":"PBO:0058322"}


id: GO:0008834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,6E)-farnesyl diphosphate + 8 isopentenyl diphosphate = di-trans,octa-cis-undecaprenyl diphosphate + 8 diphosphate.","definition_xrefs":["RHEA:27551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ditrans,polycis-polyprenyl diphosphate synthase [(2E,6E)-farnesyl diphosphate specific] activity","termid":"GO:0045547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016765"],"is_obsolete":false,"name":"ditrans,polycis-undecaprenyl-diphosphate synthase [(2E,6E)-farnesyl-diphosphate specific] activity","secondary_identifiers":["EC:2.5.1.31","MetaCyc:RXN-8999"],"synonyms":[{"name":"UPP synthetase activity","type":"related"},{"name":"bactoprenyl-diphosphate synthase activity","type":"related"},{"name":"di-trans,poly-cis-decaprenyl-diphosphate:isopentenyl-diphosphate undecaprenylcistransferase activity","type":"related"},{"name":"di-trans,poly-cis-decaprenylcistransferase activity","type":"exact"},{"name":"di-trans,poly-cis-undecaprenyl-diphosphate synthase activity","type":"exact"},{"name":"undecaprenyl diphosphate synthase activity","type":"exact"},{"name":"undecaprenyl diphosphate synthetase activity","type":"related"},{"name":"undecaprenyl pyrophosphate synthase activity","type":"related"},{"name":"undecaprenyl pyrophosphate synthetase activity","type":"related"},{"name":"undecaprenyl-diphosphate synthase activity","type":"related"}],"termid":"GO:0008834"}


id: GO:0047218
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-coumarate + UDP-D-glucose = 4-O-beta-D-glucosyl-4-hydroxycinnamate + UDP. Also acts on ferulate, caffeate and sinapate, forming a mixture of 4-glucosides and glucose esters.","definition_xrefs":["EC:2.4.1.126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"hydroxycinnamate 4-beta-glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.126-RXN","RHEA:21636"],"synonyms":[{"name":"UDP-glucose-hydroxycinnamate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:trans-4-hydroxycinnamate 4-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:trans-4-hydroxycinnamate 4-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"hydroxycinnamoyl glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-hydroxycinnamate glucosyltransferase activity","type":"related"}],"termid":"GO:0047218"}


id: PR:P78847
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nuclear pore complex protein Nup205 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04901","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup186 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC290.03c","secondary_identifiers":["UniProtKB:P78847"],"synonyms":[{"name":"Spom972h-NUP205","type":"exact"},{"name":"nuclear pore protein nup186 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78847"}


id: GO:0039693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The replication of a viral DNA genome.","definition_xrefs":["GOC:bf","GOC:jl","VZ:915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral genome replication","termid":"GO:0019079"},{"relation_name":"is_a","term_name":"DNA biosynthetic process","termid":"GO:0071897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"viral DNA genome replication","secondary_identifiers":["GO:0039681"],"synonyms":[{"name":"DNA-dependent viral DNA replication","type":"exact"},{"name":"viral DNA replication","type":"exact"},{"name":"viral DNA-dependent DNA replication","type":"exact"}],"termid":"GO:0039693"}


id: PBO:0067499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 635, pseudogene","termid":"PBO:0067499"}


id: GO:0019335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 3-methylquinoline, C10H9N, an aromatic compound composed of a benzene ring and a heterocyclic N-containing ring.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-methylquinoline metabolic process","termid":"GO:0018930"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"3-methylquinoline catabolic process","secondary_identifiers":["MetaCyc:PWY-721"],"synonyms":[{"name":"3-methylquinoline breakdown","type":"exact"},{"name":"3-methylquinoline catabolism","type":"exact"},{"name":"3-methylquinoline degradation","type":"exact"}],"termid":"GO:0019335"}


id: GO:0036425
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: O-phospho-D-serine + H2O = L-serine + phosphate, on a free amino acid.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete D-phosphoserine phosphatase activity (obsolete GO:0036425)","termid":"GO:0036425"}


id: PBO:0072204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 3","termid":"PBO:0072204"}


id: PBO:0000931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit Sgf11","termid":"PBO:0000931"}


id: MONDO:0002281
data:
  {"annotated_genes":["SJAG_01548","SJAG_03447","SJAG_03424"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009238"},{"annotations":[85210,85209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007925"}]},"cv_name":"mondo","definition":"Anemia that is characterized by increased red blood cell volume.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01548":null,"SJAG_03424":null,"SJAG_03447":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"macrocytic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["HP:0001972","MEDGEN:1920","MESH:D000748","NCIT:C34381","DOID:2361","SCTID:83414005","UMLS:C0002886"],"synonyms":[{"name":"D22S676","type":"exact"},{"name":"D22S750","type":"exact"},{"name":"anaemia macrocytic","type":"exact"},{"name":"anemia macrocytic","type":"exact"},{"name":"macrocytic Anaemia","type":"exact"},{"name":"macrocytic Anemia","type":"exact"},{"name":"macrocytic anaemia (disease)","type":"exact"},{"name":"macrocytic anaemia of unspecified cause","type":"exact"},{"name":"macrocytic anemia","type":"exact"},{"name":"macrocytic anemia (disease)","type":"exact"},{"name":"macrocytic anemia of unspecified cause","type":"exact"}],"termid":"MONDO:0002281","terms_by_termid":{"MONDO:0007925":null,"MONDO:0009238":null},"xrefs":{"Monarch":{"xref_id":"0002281"}}}


id: MONDO:0017920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deafness-genital anomalies-metacarpal and metatarsal synostosis syndrome is characterized by sensorineural deafness, bilateral synostosis of the 4th and 5th metacarpals and metatarsals, genital anomalies (hypospadias in males), psychomotor delay and abnormal dermatoglyphics. So far, it has been described in two unrelated patients. Facial dysmorphism was noted in both patients (prominent forehead, ear anomalies, facial asymmetry and an open mouth appearance).","definition_xrefs":["Orphanet:3224"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness-genital anomalies-metacarpal and metatarsal synostosis syndrome","secondary_identifiers":["GARD:4303","UMLS:C2931654","MESH:C537887","SCTID:721086004","MEDGEN:419464"],"synonyms":[{"name":"Pfeiffer Kapferer syndrome","type":"related"},{"name":"Pfeiffer-Kapferer syndrome","type":"exact"},{"name":"sensorineural deafness, hypospadias, and synostosis of metacarpals and metatarsals 4 and 5","type":"related"},{"name":"short stature, intellectual disability and multiple dysmorphisms","type":"related"},{"name":"short stature, mental retardation and multiple dysmorphisms","type":"related"}],"termid":"MONDO:0017920","xrefs":{"Monarch":{"xref_id":"0017920"}}}


id: PR:C6Y4C5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ecl2 gene.","definition_xrefs":["UniProtKB:C6Y4C5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extender of the chronological lifespan protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.16c","synonyms":[{"name":"Spom972h-ecl2","type":"exact"}],"termid":"PR:C6Y4C5"}


id: PBO:0040823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bridging integrator 2 pseudogene 1","termid":"PBO:0040823"}


id: GO:0141152
data:
  {"annotated_genes":["SJAG_00409","SJAG_01012"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93463,105993],"is_not":false,"summary":null,"term":"GO:0141152"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + sn-glycerol 3-phosphate = dihydroxyacetone phosphate + H+ + NADH.","definition_xrefs":["RHEA:11092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_01012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.1.1.8","KEGG_REACTION:R00842","MetaCyc:1.1.1.8-RXN"],"synonyms":[{"name":"L-alpha-glycerol phosphate dehydrogenase activity","type":"broad"},{"name":"L-alpha-glycerophosphate dehydrogenase activity","type":"broad"},{"name":"L-glycerol phosphate dehydrogenase activity","type":"broad"},{"name":"L-glycerophosphate dehydrogenase activity","type":"broad"},{"name":"NAD-L-glycerol-3-phosphate dehydrogenase activity","type":"exact"},{"name":"NAD-alpha-glycerophosphate dehydrogenase activity","type":"exact"},{"name":"NAD-dependent glycerol phosphate dehydrogenase activity","type":"exact"},{"name":"NAD-dependent glycerol-3-phosphate dehydrogenase activity","type":"exact"},{"name":"NAD-linked glycerol 3-phosphate dehydrogenase activity","type":"exact"},{"name":"NADH-dihydroxyacetone phosphate reductase activity","type":"exact"},{"name":"alpha-glycerol phosphate dehydrogenase (NAD) activity","type":"exact"},{"name":"alpha-glycerophosphate dehydrogenase (NAD) activity","type":"exact"},{"name":"glycerol 1-phosphate dehydrogenase activity","type":"broad"},{"name":"glycerol phosphate dehydrogenase (NAD) activity","type":"exact"},{"name":"glycerol-3-phosphate dehydrogenase (NAD) activity","type":"exact"},{"name":"glycerol-3-phosphate dehydrogenase [NAD+] activity","type":"exact"},{"name":"glycerophosphate dehydrogenase (NAD) activity","type":"exact"},{"name":"hydroglycerophosphate dehydrogenase activity","type":"broad"}],"termid":"GO:0141152","terms_by_termid":{"GO:0141152":null}}


id: MONDO:0003805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neoplasm of mesothelial origin that arises from the pericardium.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pericardium cancer","termid":"MONDO:0001322"},{"relation_name":"is_a","term_name":"malignant mesothelioma","termid":"MONDO:0006292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005267"],"is_obsolete":false,"name":"malignant pericardial mesothelioma","secondary_identifiers":["MEDGEN:233322","NCIT:C7631","SCTID:109383000","UMLS:C1335381","HP:0100004","DOID:6201"],"synonyms":[{"name":"malignant mesothelioma (disease) of pericardium","type":"exact"},{"name":"malignant mesothelioma of pericardium","type":"exact"},{"name":"malignant mesothelioma of the pericardium","type":"exact"},{"name":"malignant pericardial mesothelioma","type":"exact"},{"name":"pericardial malignant mesothelioma","type":"exact"},{"name":"pericardial mesothelioma","type":"related"},{"name":"pericardium malignant mesothelioma (disease)","type":"exact"},{"name":"pericardium mesothelioma","type":"exact"}],"termid":"MONDO:0003805","xrefs":{"Monarch":{"xref_id":"0003805"}}}


id: PBO:0042790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 164 pseudogene 1","termid":"PBO:0042790"}


id: GO:1904710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of granulosa cell apoptotic process.","definition_xrefs":["PMID:19208546","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell apoptotic process","termid":"GO:1904037"},{"relation_name":"is_a","term_name":"regulation of granulosa cell apoptotic process","termid":"GO:1904708"},{"relation_name":"positively_regulates","term_name":"granulosa cell apoptotic process","termid":"GO:1904700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of granulosa cell apoptotic process","synonyms":[{"name":"activation of granulosa cell apoptosis","type":"narrow"},{"name":"activation of granulosa cell apoptotic process","type":"narrow"},{"name":"activation of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"activation of granulosa cell of ovary apoptotic process","type":"narrow"},{"name":"positive regulation of granulosa cell apoptosis","type":"narrow"},{"name":"positive regulation of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"positive regulation of granulosa cell of ovary apoptotic process","type":"exact"},{"name":"up regulation of granulosa cell apoptosis","type":"narrow"},{"name":"up regulation of granulosa cell apoptotic process","type":"exact"},{"name":"up regulation of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"up regulation of granulosa cell of ovary apoptotic process","type":"exact"},{"name":"up-regulation of granulosa cell apoptosis","type":"narrow"},{"name":"up-regulation of granulosa cell apoptotic process","type":"exact"},{"name":"up-regulation of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"up-regulation of granulosa cell of ovary apoptotic process","type":"exact"},{"name":"upregulation of granulosa cell apoptosis","type":"narrow"},{"name":"upregulation of granulosa cell apoptotic process","type":"exact"},{"name":"upregulation of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"upregulation of granulosa cell of ovary apoptotic process","type":"exact"}],"termid":"GO:1904710"}


id: MONDO:0005304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm that involves the biliary tract.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biliary tract disorder","termid":"MONDO:0004868"},{"relation_name":"is_a","term_name":"liver and intrahepatic bile duct neoplasm","termid":"MONDO:0024477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"biliary tract neoplasm","secondary_identifiers":["SCTID:126853008","MEDGEN:14118","ONCOTREE:BILIARYTRACT","DOID:0050625","UMLS:C0005426","EFO:0003891","HP:0100574"],"synonyms":[{"name":"biliary tract neoplasm","type":"exact"},{"name":"biliary tract neoplasm (disease)","type":"exact"},{"name":"biliary tree neoplasm","type":"exact"},{"name":"biliary tree neoplasm (disease)","type":"exact"},{"name":"biliary tree tumor","type":"exact"},{"name":"biliary tree tumour","type":"exact"},{"name":"neoplasm of biliary tree","type":"exact"},{"name":"neoplasm of extrahepatic bile ducts","type":"exact"},{"name":"tumor of biliary tree","type":"exact"},{"name":"tumour of biliary tree","type":"exact"},{"name":"tumour of the extrahepatic bile duct","type":"related"}],"termid":"MONDO:0005304","xrefs":{"Monarch":{"xref_id":"0005304"}}}


id: PBO:0040620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRAF-activated non-protein coding RNA","termid":"PBO:0040620"}


id: PBO:0073404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 7","termid":"PBO:0073404"}


id: GO:0035496
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + lipopolysaccharide = UDP + 1,5 alpha-D-galactosyl-lipopolysaccharide.","definition_xrefs":["PMID:11304545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"lipopolysaccharide-1,5-galactosyltransferase activity","synonyms":[{"name":"LPS-1,5-galactosyltransferase activity","type":"exact"},{"name":"UDP-D-galactose:(glucosyl)lipopolysaccharide-1,5-D-galactosyltransferase","type":"exact"}],"termid":"GO:0035496"}


id: SO:0000025
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An internal RNA loop where the extent of the loop on both stands is the same size.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA_internal_loop","termid":"SO:0000020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symmetric_RNA_internal_loop","synonyms":[{"name":"A-minor RNA motif","type":"exact"}],"termid":"SO:0000025"}


id: PBO:0078266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 2-4","termid":"PBO:0078266"}


id: GO:0032665
data:
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id: GO:0034164
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id: MONDO:0017153
data:
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id: GO:0052891
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id: PBO:0059024
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 13","termid":"PBO:0059024"}


id: PBO:0091698
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  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae sgt1","termid":"PBO:0091698"}


id: GO:0016704
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id: GO:1901735
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id: PBO:0051689
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id: PBO:0067876
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id: GO:0034525
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id: PBO:0034077
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id: GO:0034220
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id: PBO:0090059
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id: MOD:01596
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id: GO:0000296
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id: MOD:00391
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id: GO:0061269
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id: GO:0061990
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: octanoyl-CoA + H+ + malonyl-[ACP] = 3-oxodecanoyl-[ACP] + CO2 + CoA.","definition_xrefs":["PMID:22753057","RHEA:42264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"beta-ketodecanoyl-[acyl-carrier-protein] synthase activity","secondary_identifiers":["MetaCyc:RXN-13613","EC:2.3.1.207"],"termid":"GO:0061990"}


id: GO:0002899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of central B cell deletion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of B cell deletion","termid":"GO:0002868"},{"relation_name":"is_a","term_name":"negative regulation of central B cell tolerance induction","termid":"GO:0002896"},{"relation_name":"is_a","term_name":"regulation of central B cell deletion","termid":"GO:0002898"},{"relation_name":"is_a","term_name":"negative regulation of B cell differentiation","termid":"GO:0045578"},{"relation_name":"negatively_regulates","term_name":"central B cell deletion","termid":"GO:0002342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of central B cell deletion","synonyms":[{"name":"down regulation of central B cell deletion","type":"exact"},{"name":"down-regulation of central B cell deletion","type":"exact"},{"name":"downregulation of central B cell deletion","type":"exact"},{"name":"inhibition of central B cell deletion","type":"narrow"}],"termid":"GO:0002899"}


id: GO:0016775
data:
  {"annotated_genes":["SJAG_00331","SJAG_02183","SJAG_01587"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94744,117782,90643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000155"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to a nitrogenous group (acceptor).","definition_xrefs":["EC:2.7.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring phosphorus-containing groups","termid":"GO:0016772"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00331":null,"SJAG_01587":null,"SJAG_02183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"phosphotransferase activity, nitrogenous group as acceptor","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016775","terms_by_termid":{"GO:0000155":null}}


id: PR:O13808
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glia maturation factor beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00830","PANTHER:PTHR11249:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-depolymerizing factor gmf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.11","secondary_identifiers":["UniProtKB:O13808"],"synonyms":[{"name":"Spom972h-GMFB","type":"exact"},{"name":"glia maturation factor-like protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13808"}


id: PBO:0064664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A like 4G","termid":"PBO:0064664"}


id: PBO:0029064
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-small_vacuoles","termid":"PBO:0029064"}


id: PBO:0114113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set1C complex WD repeat subunit Swd2.1","termid":"PBO:0114113"}


id: GO:0043409
data:
  {"annotated_genes":["SJAG_04825","SJAG_05000","SJAG_02392","SJAG_02013","SJAG_03185","SJAG_03893","SJAG_01114","SJAG_04522","SJAG_00975","SJAG_03263","SJAG_02000","SJAG_02233"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87681,106625],"is_not":false,"summary":null,"term":"GO:0043409"},{"annotations":[98940,107100,106534,117813,103303,95338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[94518,116574,117814,98942,91146,95459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903753"},{"annotations":[106626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180040"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of MAPK cascade","termid":"GO:0043408"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"MAPK cascade","termid":"GO:0000165"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00975":null,"SJAG_01114":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_02233":null,"SJAG_02392":null,"SJAG_03185":null,"SJAG_03263":null,"SJAG_03893":null,"SJAG_04522":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of MAPK cascade","type":"exact"},{"name":"down regulation of MAPKKK cascade","type":"exact"},{"name":"down-regulation of MAPK cascade","type":"exact"},{"name":"down-regulation of MAPKKK cascade","type":"exact"},{"name":"downregulation of MAPK cascade","type":"exact"},{"name":"downregulation of MAPKKK cascade","type":"exact"},{"name":"inhibition of MAPK cascade","type":"narrow"},{"name":"inhibition of MAPKKK cascade","type":"narrow"},{"name":"negative regulation of MAP kinase cascade","type":"exact"},{"name":"negative regulation of MAP kinase kinase kinase cascade","type":"exact"},{"name":"negative regulation of MAPKKK cascade","type":"exact"},{"name":"negative regulation of mitogen activated protein kinase cascade","type":"exact"},{"name":"negative regulation of mitogen activated protein kinase kinase kinase cascade","type":"exact"},{"name":"negative regulation of mitogen-activated protein kinase cascade","type":"exact"},{"name":"negative regulation of mitogen-activated protein kinase kinase kinase cascade","type":"exact"}],"termid":"GO:0043409","terms_by_termid":{"GO:0043409":null,"GO:0180040":null,"GO:1903138":null,"GO:1903753":null}}


id: PBO:0086399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative dityrosine transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; required for spore wall synthesis; sequence similarity to QDR1 and QDR3, and the triple mutant dtr1 qdr1 qdr3 exhibits reduced dityrosine fluorescence relative to the single mutants; expressed during sporulation","termid":"PBO:0086399"}


id: PBO:0024840
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae DSS1","termid":"PBO:0024840"}


id: PBO:0001155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat protein, implicated in meiosis","termid":"PBO:0001155"}


id: PBO:0079704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream binding protein 1","termid":"PBO:0079704"}


id: PBO:0043175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIR1 pseudogene 2","termid":"PBO:0043175"}


id: PBO:0043708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX6A1 pseudogene 5","termid":"PBO:0043708"}


id: PBO:0038728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 23","termid":"PBO:0038728"}


id: MONDO:0000529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0000529 (obsolete MONDO:0000529)","termid":"MONDO:0000529","xrefs":{"Monarch":{"xref_id":"0000529"}}}


id: PBO:0085861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the vacuole; YDL211C has a paralog, TDA7, that arose from the whole genome duplication","termid":"PBO:0085861"}


id: MONDO:1012186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nephropathy, non-human animal","termid":"MONDO:1011907"},{"relation_name":"is_a","term_name":"renal disease, dog","termid":"MONDO:1012235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephropathy, dog","secondary_identifiers":["OMIA:000710-9615"],"termid":"MONDO:1012186","xrefs":{"Monarch":{"xref_id":"1012186"}}}


id: MONDO:0011857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial atrial fibrillation in which the cause of the disease is a mutation in the KCNQ1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrial fibrillation","termid":"MONDO:0018054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial fibrillation, familial, 3","secondary_identifiers":["OMIM:607554","MEDGEN:373232","UMLS:C1837014","MESH:C563817","GARD:15414"],"synonyms":[{"name":"ATFB3","type":"related"},{"name":"KCNQ1 familial atrial fibrillation","type":"exact"},{"name":"atrial fibrillation, familial, 3","type":"exact"},{"name":"atrial fibrillation, familial, type 3","type":"exact"},{"name":"familial atrial fibrillation caused by mutation in KCNQ1","type":"exact"}],"termid":"MONDO:0011857","xrefs":{"Monarch":{"xref_id":"0011857"}}}


id: GO:0019743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of hopanoids, pentacyclic sterol-like compounds based on the hopane nucleus.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triterpenoid catabolic process","termid":"GO:0016105"},{"relation_name":"is_a","term_name":"hopanoid metabolic process","termid":"GO:0019744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"hopanoid catabolic process","synonyms":[{"name":"hopanoid breakdown","type":"exact"},{"name":"hopanoid catabolism","type":"exact"},{"name":"hopanoid degradation","type":"exact"}],"termid":"GO:0019743"}


id: PBO:0013777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mst2/NuA4 histone acetyltransferase complex subunit Eaf6","termid":"PBO:0013777"}


id: PATO:0002394
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A tolerance quality inhering in a bearer by virtue of the bearer's decreased ability to endure a stimulus.","definition_xrefs":["PATOC:LC"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"tolerant to","termid":"PATO:0000515"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased tolerance to","termid":"PATO:0002394"}


id: PBO:0111800
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Req family helicase","termid":"PBO:0111800"}


id: PBO:0070251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 194 pseudogene","termid":"PBO:0070251"}


id: MONDO:0011801
data:
  {"annotated_genes":["SJAG_04418"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85091],"is_not":false,"summary":null,"term":"MONDO:0011801"}]},"cv_name":"mondo","definition":"Spinocerebellar ataxia with axonal neuropathy type 1 is a rare, genetic neurological disorder characterized by a late childhood onset of slowly progressive cerebellar ataxia. Initial manifestations include weakness and atrophy of distal limb muscles, areflexia and loss of pain, vibration and touch sensations in upper and lower extremities. Gaze nystagmus, cerebellar dysarthria, peripheral neuropathy, stepagge gait and pes cavus develop as disease progresses. Cerebellar atrophy (especially of the vermis) is present in all affected individuals. Additional reported manifestations include seizures, mild brain atrophy, mild hypercholesterolemia and borderline hypoalbuminemia.","definition_xrefs":["Orphanet:94124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"spinocerebellar ataxia, autosomal recessive, with axonal neuropathy","termid":"MONDO:0020771"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04418":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005244","MONDO:0021190","MONDO:0006025"],"is_obsolete":false,"name":"spinocerebellar ataxia, autosomal recessive, with axonal neuropathy 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:607250","MEDGEN:1683470","DOID:0090115","MESH:C537313","UMLS:C4759870","NORD:1730","SCTID:765091006","GARD:10000"],"synonyms":[{"name":"SCAN1","type":"exact"},{"name":"Spinocerebellar Ataxia with Axonal Neuropathy","type":"exact"},{"name":"autosomal recessive spinocerebellar ataxia with axonal neuropathy","type":"broad"},{"name":"spinocerebellar ataxia autosomal recessive with axonal neuropathy","type":"related"},{"name":"spinocerebellar ataxia type 1 with axonal neuropathy","type":"exact"},{"name":"spinocerebellar ataxia with axonal neuropathy","type":"related"},{"name":"spinocerebellar ataxia with axonal neuropathy type 1","type":"related"},{"name":"spinocerebellar ataxia, autosomal recessive, with axonal neuropathy","type":"broad"},{"name":"spinocerebellar ataxia, autosomal recessive, with axonal neuropathy 1","type":"exact"}],"termid":"MONDO:0011801","terms_by_termid":{"MONDO:0011801":null},"xrefs":{"Monarch":{"xref_id":"0011801"}}}


id: GO:0061024
data:
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id: GO:0004202
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-2 activity (obsolete GO:0004202)","synonyms":[{"name":"caspase-2 activity","type":"exact"}],"termid":"GO:0004202"}


id: PBO:0031391
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_ethanolamine","termid":"PBO:0031391"}


id: GO:0035555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a SLIT protein causes activation of the receptor, Roundabout (ROBO).","definition_xrefs":["GOC:vk"],"gene_count":0,"genotype_count":0,"name":"obsolete initiation of Roundabout signal transduction (obsolete GO:0035555)","synonyms":[{"name":"initiation of Roundabout signal transduction","type":"exact"}],"termid":"GO:0035555"}


id: MONDO:1012527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ichthyosis fetalis, non-human animal","termid":"MONDO:1011764"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis fetalis, sheep","secondary_identifiers":["OMIA:002193-9940"],"termid":"MONDO:1012527","xrefs":{"Monarch":{"xref_id":"1012527"}}}


id: GO:0045707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of salivary gland determination in an adult organism.","definition_xrefs":["GOC:tb","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of salivary gland boundary specification","termid":"GO:0045704"},{"relation_name":"regulates","term_name":"adult salivary gland boundary specification","termid":"GO:0007434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of adult salivary gland boundary specification","synonyms":[{"name":"regulation of adult salivary gland determination","type":"exact"}],"termid":"GO:0045707"}


id: PBO:0073367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family I member 2","termid":"PBO:0073367"}


id: PBO:0088692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin alpha family nuclear import signal receptor adaptor Imp1","termid":"PBO:0088692"}


id: GO:0044320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a leptin stimulus. Leptin is a hormone manufactured primarily in the adipocytes of white adipose tissue, and the level of circulating leptin is directly proportional to the total amount of fat in the body. It plays a key role in regulating energy intake and energy expenditure, including appetite and metabolism.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"},{"relation_name":"is_a","term_name":"response to leptin","termid":"GO:0044321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to leptin stimulus","termid":"GO:0044320"}


id: FYPO:0007418
data:
  {"alleles_by_uniquename":{"SJAG_01834:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01834","name":"pom152delta","uniquename":"SJAG_01834:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007770"},{"annotations":[118714,118711,118710,118712],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004890"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which telomere localization, a process in which a telomere is transported to, and/or maintained in, a specific location, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype","termid":"FYPO:0000138"},{"relation_name":"is_a","term_name":"abnormal biological process","termid":"FYPO:0005447"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01834":null,"SJAG_03449":null,"SJAG_03892":null},"genotype_count":5,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"pom152delta":{"display_name":"pom152delta","display_uniquename":"pom152delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01834:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abnormal telomere localization","references_by_uniquename":{"PMID:24184107":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01834","SJAG_03449","SJAG_03892"],"single_locus_genotype_uniquenames":["man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","man1delta","pom152delta","vps4delta"],"synonyms":[{"name":"abnormal telomere localisation","type":"exact"}],"termid":"FYPO:0007418","terms_by_termid":{"FYPO:0004890":null,"FYPO:0007770":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0085551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) subunit; essential for control of translational accuracy; phosphorylation by C-terminal domain kinase I (CTDK-I) enhances translational accuracy; methylated on one or more arginine residues by Hmt1p; homologous to mammalian ribosomal protein S2 and bacterial S5","termid":"PBO:0085551"}


id: PBO:0084575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane protein required for translocation of Man5GlcNac2-PP-Dol; required for translocation of Man5GlcNac2-PP-Dol from the cytoplasmic side to the lumenal side of the ER membrane but is not the flippase; mutation is suppressed by expression of human p53 protein; essential gene","termid":"PBO:0084575"}


id: GO:1900665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of emodin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of emodin biosynthetic process","termid":"GO:1900664"},{"relation_name":"negatively_regulates","term_name":"emodin biosynthetic process","termid":"GO:1900575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of emodin biosynthetic process","synonyms":[{"name":"down regulation of emodin anabolism","type":"exact"},{"name":"down regulation of emodin biosynthesis","type":"exact"},{"name":"down regulation of emodin biosynthetic process","type":"exact"},{"name":"down regulation of emodin formation","type":"exact"},{"name":"down regulation of emodin synthesis","type":"exact"},{"name":"down-regulation of emodin anabolism","type":"exact"},{"name":"down-regulation of emodin biosynthesis","type":"exact"},{"name":"down-regulation of emodin biosynthetic process","type":"exact"},{"name":"down-regulation of emodin formation","type":"exact"},{"name":"down-regulation of emodin synthesis","type":"exact"},{"name":"downregulation of emodin anabolism","type":"exact"},{"name":"downregulation of emodin biosynthesis","type":"exact"},{"name":"downregulation of emodin biosynthetic process","type":"exact"},{"name":"downregulation of emodin formation","type":"exact"},{"name":"downregulation of emodin synthesis","type":"exact"},{"name":"inhibition of emodin anabolism","type":"exact"},{"name":"inhibition of emodin biosynthesis","type":"exact"},{"name":"inhibition of emodin biosynthetic process","type":"narrow"},{"name":"inhibition of emodin formation","type":"exact"},{"name":"inhibition of emodin synthesis","type":"exact"},{"name":"negative regulation of emodin anabolism","type":"exact"},{"name":"negative regulation of emodin biosynthesis","type":"exact"},{"name":"negative regulation of emodin formation","type":"exact"},{"name":"negative regulation of emodin synthesis","type":"exact"}],"termid":"GO:1900665"}


id: PBO:0044233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin 2","termid":"PBO:0044233"}


id: FYPO:0005754
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of (1->3)-alpha-D-glucan measured in the periplasmic space is greater than normal.","definition_xrefs":["PomBase:mah","PMID:11514435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased polysaccharide level during vegetative growth","termid":"FYPO:0001083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased (1->3)-alpha-D-glucan level in periplasmic space","synonyms":[{"name":"increased (1,3)alpha-D-glucan level in periplasmic space","type":"exact"},{"name":"increased (1->3)-alpha-D-glucan accumulation in periplasmic space","type":"related"},{"name":"increased (1->3)-alpha-D-glucan level in periplasmic space during mitotic cell cycle","type":"related"},{"name":"increased (1->3)-alpha-D-glucan level in periplasmic space during vegetative growth","type":"exact"},{"name":"increased 1,3-alpha-D-glucan level in periplasmic space","type":"exact"},{"name":"increased level of (1->3)-alpha-D-glucan in periplasmic space","type":"exact"}],"termid":"FYPO:0005754"}


id: PBO:0029590
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_binding_phenotype","termid":"PBO:0029590"}


id: GO:0001865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a NK T cell.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:10704459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell differentiation","termid":"GO:0046632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"NK T cell differentiation","synonyms":[{"name":"NK T cell development","type":"related"},{"name":"NK T lymphocyte differentiation","type":"exact"},{"name":"NK T-cell differentiation","type":"exact"},{"name":"NK T-lymphocyte differentiation","type":"exact"},{"name":"NKT cell differentiation","type":"exact"},{"name":"NT cell differentiation","type":"exact"},{"name":"natural T cell differentiation","type":"exact"},{"name":"natural killer T cell differentiation","type":"exact"}],"termid":"GO:0001865"}


id: GO:0016041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 L-glutamate + 2 oxidized ferredoxin = L-glutamine + 2-oxoglutarate + 2 reduced ferredoxin + 2 H+. This is a two-step reaction: (a) L-glutamate + NH3 = L-glutamine + H2O, (b) L-glutamate + 2 oxidized ferredoxin + H2O = NH3 + 2-oxoglutarate + 2 reduced ferredoxin + 2 H+.","definition_xrefs":["EC:1.4.7.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate synthase activity","termid":"GO:0015930"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor","termid":"GO:0016643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glutamate synthase (ferredoxin) activity","secondary_identifiers":["MetaCyc:GLUTAMATE-SYNTHASE-FERREDOXIN-RXN","RHEA:12128"],"synonyms":[{"name":"L-glutamate:ferredoxin oxidoreductase (transaminating)","type":"related"},{"name":"ferredoxin-dependent glutamate synthase activity","type":"related"},{"name":"ferredoxin-glutamate synthase activity","type":"related"},{"name":"glutamate synthase (ferredoxin-dependent)","type":"related"}],"termid":"GO:0016041"}


id: PBO:0030510
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_protease_inhibitor","termid":"PBO:0030510"}


id: PBO:0076772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain containing 12","termid":"PBO:0076772"}


id: PBO:0002932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sec7 domain protein, ARF GEF (predicted)","termid":"PBO:0002932"}


id: PBO:0068985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 229, pseudogene","termid":"PBO:0068985"}


id: PBO:0036063
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_transport_on_microtubule_tip_to_cell_tip_cortex_during_vegetative_growth","termid":"PBO:0036063"}


id: PBO:0085783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of the Sec1p/Munc-18 family; essential for vacuolar protein sorting; required for the function of Pep12p and the early endosome/late Golgi SNARE Tlg2p; essential for fusion of Golgi-derived vesicles with the prevacuolar compartment; mutation in human VPS45 is associated with congenital neutropenia and primary myelofibrosis of infancy","termid":"PBO:0085783"}


id: PBO:0050610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 3","termid":"PBO:0050610"}


id: GO:0009519
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Layer of intercellular material, chiefly pectic substances, cementing together the primary walls of contiguous cells.","definition_xrefs":["ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specialized extracellular matrix","termid":"GO:0140047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"middle lamella","secondary_identifiers":["Wikipedia:Middle_lamella"],"termid":"GO:0009519"}


id: RO:0002021
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between a process and a barrier, where the process occurs in a region spanning the barrier. For cellular processes the barrier is typically a membrane. Examples include transport across a membrane and membrane depolarization.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part_that_occurs_in","termid":"RO:0002479"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occurs_across","termid":"RO:0002021"}


id: PR:O59760
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1020.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized hydrolase C1020.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.07","synonyms":[{"name":"Spom972h-SPCC1020.07","type":"exact"}],"termid":"PR:O59760"}


id: GO:0006704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucocorticoids, hormonal C21 corticosteroids synthesized from cholesterol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucocorticoid metabolic process","termid":"GO:0008211"},{"relation_name":"is_a","term_name":"steroid hormone biosynthetic process","termid":"GO:0120178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"glucocorticoid biosynthetic process","secondary_identifiers":["Reactome:R-HSA-194002"],"synonyms":[{"name":"glucocorticoid anabolism","type":"exact"},{"name":"glucocorticoid biosynthesis","type":"exact"},{"name":"glucocorticoid formation","type":"exact"},{"name":"glucocorticoid synthesis","type":"exact"}],"termid":"GO:0006704"}


id: PBO:0043880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CREB3 regulatory factor","termid":"PBO:0043880"}


id: MONDO:0012091
data:
  {"annotated_genes":["SJAG_00082"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86107],"is_not":false,"summary":null,"term":"MONDO:0012091"}]},"cv_name":"mondo","definition":"An autosomal recessive nonsyndromic deafness that is characterized by prelingual onset with severe to profound, stable hearing loss and has material basis in variation in the chromosome region 1p22.1-p13.3.","definition_xrefs":["PMID:12634867","DOID:0110491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00082":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 32","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:373370","OMIM:608653","GARD:22610","MESH:C563884","UMLS:C1837608","DOID:0110466"],"synonyms":[{"name":"CDC14A autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"DFNB105","type":"narrow"},{"name":"DFNB32","type":"narrow"},{"name":"autosomal recessive deafness 105","type":"narrow"},{"name":"autosomal recessive deafness 32","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 105","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 32","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in CDC14A","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 105","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 32","type":"narrow"},{"name":"deafness, autosomal recessive 105","type":"narrow"},{"name":"deafness, autosomal recessive 32","type":"narrow"},{"name":"deafness, autosomal recessive 32, with or without immotile sperm","type":"narrow"},{"name":"deafness, autosomal recessive type 105","type":"narrow"}],"termid":"MONDO:0012091","terms_by_termid":{"MONDO:0012091":null},"xrefs":{"Monarch":{"xref_id":"0012091"}}}


id: PBO:0011492
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tagging Tra1 at its C-terminus is as detrimental as deletion","termid":"PBO:0011492"}


id: MONDO:1040023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of rare genetic conditions caused by variants in the NDUFB11 gene. Presentation is heterogenous including neurologic, cardiac, ocular, and dermatological abnormalities.","definition_xrefs":["PMID:26741492","PMID:25772934","PMID:25921236","PMID:27102574"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDUFB11-related disorders","termid":"MONDO:1040023","xrefs":{"Monarch":{"xref_id":"1040023"}}}


id: PBO:0090050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase subunit Sec11","termid":"PBO:0090050"}


id: MONDO:0022652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cardiomyopathy dilated with conduction defect type 2 (obsolete MONDO:0022652)","termid":"MONDO:0022652","xrefs":{"Monarch":{"xref_id":"0022652"}}}


id: PBO:0087857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator in nitrogen catabolite repression system; localization and activity regulated by quality of nitrogen source and Ure2p; full-length protein forms prion-like aggregates when overproduced","termid":"PBO:0087857"}


id: PBO:0041320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 72","termid":"PBO:0041320"}


id: MONDO:0000617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Her2-receptor positive breast cancer (obsolete MONDO:0000617)","termid":"MONDO:0000617","xrefs":{"Monarch":{"xref_id":"0000617"}}}


id: PBO:0048503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 3","termid":"PBO:0048503"}


id: GO:1902448
data:
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id: GO:1900907
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id: PBO:0067418
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id: PBO:0041064
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id: GO:1905299
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id: GO:0051513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of monopolar cell growth, polarized growth from one end of a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of unidimensional cell growth","termid":"GO:0051510"},{"relation_name":"regulates","term_name":"monopolar cell growth","termid":"GO:0042814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of monopolar cell growth","termid":"GO:0051513"}


id: PBO:0062353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily N member 1","termid":"PBO:0062353"}


id: GO:1903438
data:
  {"annotated_genes":["SJAG_01114","SJAG_03631","SJAG_00082","SJAG_01805","SJAG_01188","SJAG_00845","SJAG_01787","SJAG_03936","SJAG_05290","SJAG_02838","SJAG_03581","SJAG_00514","SJAG_03704","SJAG_04666","SJAG_04597","SJAG_04468","SJAG_03342","SJAG_02392","SJAG_04776"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89474,93896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[94066,93897,87012,110014,112855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[90250,118761,103204,95342,110256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903617"},{"annotations":[112856,114967,93286,106535,88717,89345,91902,105874,104673,117392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[93900,87013,91903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic cytokinetic process.","definition_xrefs":["GOC:vw","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cytokinetic process","termid":"GO:1903436"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cytokinesis","termid":"GO:1903490"},{"relation_name":"positively_regulates","term_name":"mitotic cytokinetic process","termid":"GO:1902410"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00514":null,"SJAG_00845":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_02392":null,"SJAG_02838":null,"SJAG_03342":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03704":null,"SJAG_03936":null,"SJAG_04468":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0000281"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000281","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic cytokinetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null},"synonyms":[{"name":"activation of mitotic cytokinetic process","type":"narrow"},{"name":"up regulation of mitotic cytokinetic process","type":"exact"},{"name":"up-regulation of mitotic cytokinetic process","type":"exact"},{"name":"upregulation of mitotic cytokinetic process","type":"exact"}],"termid":"GO:1903438","terms_by_termid":{"GO:0140281":null,"GO:1903473":null,"GO:1903501":null,"GO:1903617":null,"GO:1905758":null}}


id: GO:1905146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cellular protein catabolic process that takes place in a lysosome.","definition_xrefs":["GOC:TermGenie","GOC:bf","PMID:24334770","GO_REF:0000062","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein catabolic process in the vacuole","termid":"GO:0007039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"lysosomal protein catabolic process","synonyms":[{"name":"cellular protein breakdown in lysosome","type":"exact"},{"name":"cellular protein catabolic process in lysosome","type":"exact"},{"name":"cellular protein catabolism in lysosome","type":"exact"},{"name":"cellular protein degradation in lysosome","type":"exact"},{"name":"lysosomal protein catabolism","type":"exact"},{"name":"lysosomal protein degradation","type":"exact"},{"name":"lysosomal proteolysis","type":"related"},{"name":"proteolysis within lysosome","type":"related"}],"termid":"GO:1905146"}


id: GO:1904982
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106082"}]},"cv_name":"biological_process","definition":"The process in which sucrose is transported across a membrane.","definition_xrefs":["PMID:11136464","GOC:TermGenie","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sucrose transport","termid":"GO:0015770"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"sucrose transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1904982","terms_by_termid":{"GO:0106082":null}}


id: SO:0001710
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 79th residue (a lysine), from the start of the H3 histone protein is mono- methylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"H3K79_methylation_site","termid":"SO:0001735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K79_monomethylation_site","synonyms":[{"name":"H3K79 mono-methylation site","type":"exact"},{"name":"H3K79me1","type":"related"}],"termid":"SO:0001710"}


id: PBO:0081587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 514","termid":"PBO:0081587"}


id: SO:0000374
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An RNA with catalytic activity.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"ribozymic","termid":"SO:0001186"},{"relation_name":"is_a","term_name":"enzymatic_RNA","termid":"SO:0000372"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribozyme","secondary_identifiers":["http://en.wikipedia.org/wiki/Ribozyme"],"synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:ribozyme","type":"exact"}],"termid":"SO:0000374"}


id: PBO:0072776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serum amyloid A like 1","termid":"PBO:0072776"}


id: MONDO:0020500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Marburg hemorrhagic fever (MHF), caused by Marburg virus, is a severe viral hemorrhagic disease characterized by initial fever and malaise followed by gastrointestinal symptoms, bleeding, shock, and multi-organ system failure.","definition_xrefs":["Orphanet:99826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Filoviridae infectious disease","termid":"MONDO:0005762"},{"relation_name":"is_a","term_name":"viral hemorrhagic fever","termid":"MONDO:0018087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Marburg hemorrhagic fever","secondary_identifiers":["ICD9:078.89","EFO:0007358","DOID:4327","GARD:9444","MESH:D008379","UMLS:C0024788","MedDRA:10026822","NCIT:C84883","MEDGEN:9888","SCTID:77503002","icd11.foundation:696598707"],"synonyms":[{"name":"Green monkey disease","type":"exact"},{"name":"MHF","type":"exact"},{"name":"Marburg disease","type":"exact"},{"name":"Marburg virus disease","type":"exact"}],"termid":"MONDO:0020500","xrefs":{"Monarch":{"xref_id":"0020500"}}}


id: MONDO:0013114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant nonsyndromic deafness that is characterized postlingual onset in the second decade of life with flat progressive hearing loss and has material basis in mutation in the MIRN96 gene on chromosome 7q32.","definition_xrefs":["DOID:0110576","PMID:19363479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 50","secondary_identifiers":["OMIM:613074","GARD:18132","MEDGEN:854780","UMLS:C3888123"],"synonyms":[{"name":"DFNA50","type":"narrow"},{"name":"autosomal dominant deafness 50","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 50","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 50","type":"narrow"},{"name":"deafness, autosomal dominant 50","type":"related"},{"name":"deafness, autosomal dominant type 50","type":"narrow"}],"termid":"MONDO:0013114","xrefs":{"Monarch":{"xref_id":"0013114"}}}


id: PATO:0002540
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's possessing a small, spike-like shape.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spur shaped","termid":"PATO:0002540"}


id: PBO:0076101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 6","termid":"PBO:0076101"}


id: MONDO:1010261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephrotic syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"},{"relation_name":"is_a","term_name":"renal disease, non-human animal","termid":"MONDO:1011909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephrotic syndrome, non-human animal","secondary_identifiers":["OMIA:000712"],"termid":"MONDO:1010261","xrefs":{"Monarch":{"xref_id":"1010261"}}}


id: PBO:0004958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PI31 proteasome regulator related","termid":"PBO:0004958"}


id: PBO:0044937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DGUOK antisense RNA 1","termid":"PBO:0044937"}


id: PBO:0002934
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.4.46","termid":"PBO:0002934"}


id: GO:0004523
data:
  {"annotated_genes":["SJAG_01884","SJAG_00400","SJAG_02039","SJAG_06022"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87780,97617,102449,108617],"is_not":false,"summary":null,"term":"GO:0004523"}]},"cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of RNA in RNA-DNA hybrids to 5'-phosphomonoesters.","definition_xrefs":["EC:3.1.26.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016891"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00400":null,"SJAG_01884":null,"SJAG_02039":null,"SJAG_06022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"RNA-DNA hybrid ribonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9913637","Reactome:R-HSA-173769","MetaCyc:3.1.26.4-RXN","Reactome:R-HSA-164519","Reactome:R-HSA-182795","Reactome:R-HSA-9914858","GO:0004524","Reactome:R-HSA-9915449","Reactome:R-HSA-164528","Reactome:R-HSA-182859"],"synonyms":[{"name":"RNA*DNA hybrid ribonucleotidohydrolase activity","type":"related"},{"name":"RNase H activity","type":"exact"},{"name":"RNase H1 activity","type":"narrow"},{"name":"RNase H2 activity","type":"narrow"},{"name":"RNase H3 activity","type":"narrow"},{"name":"calf thymus ribonuclease H activity","type":"exact"},{"name":"endoribonuclease H","type":"related"},{"name":"endoribonuclease H (calf thymus)","type":"related"},{"name":"endoribonuclease0 H activity","type":"narrow"},{"name":"hybrid nuclease activity","type":"related"},{"name":"hybrid ribonuclease activity","type":"related"},{"name":"hybridase (ribonuclease H)","type":"related"},{"name":"hybridase activity","type":"related"},{"name":"ribonuclease H activity","type":"exact"},{"name":"ribonuclease H1 activity","type":"narrow"},{"name":"ribonuclease H2 activity","type":"narrow"},{"name":"ribonuclease H3 activity","type":"narrow"}],"termid":"GO:0004523","terms_by_termid":{"GO:0004523":null}}


id: MONDO:0958231
data:
  {"annotated_genes":["SJAG_00686"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86591],"is_not":false,"summary":null,"term":"MONDO:0958231"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00686":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with motor abnormalities, seizures, and facial dysmorphism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620719"],"termid":"MONDO:0958231","terms_by_termid":{"MONDO:0958231":null},"xrefs":{"Monarch":{"xref_id":"0958231"}}}


id: GO:0001545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Increase in size of primary follicles including oocyte growth and granulosa and/or theca cell proliferation until more than one layer of granulosa cells is present (preantral follicle).","definition_xrefs":["GOC:mtg_mpo"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"ovarian follicle development","termid":"GO:0001541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary ovarian follicle growth","termid":"GO:0001545"}


id: PBO:0068962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 206, pseudogene","termid":"PBO:0068962"}


id: FYPO:0003911
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A translation phenotype in which a tRNA pairs with mRNA at the stop codon UGA, and incorporates an amino acid residue into the nascent polypeptide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal translation","termid":"FYPO:0001797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"UGA suppression","synonyms":[{"name":"UGA suppressor","type":"exact"},{"name":"opal suppression","type":"exact"},{"name":"opal suppressor","type":"exact"}],"termid":"FYPO:0003911"}


id: PBO:0078119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 8-1","termid":"PBO:0078119"}


id: PBO:0074715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 75B","termid":"PBO:0074715"}


id: GO:0071208
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the downstream cleavage product (DCP) generated by histone pre-mRNA 3'-end processing.","definition_xrefs":["PMID:19470752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"histone pre-mRNA DCP binding","termid":"GO:0071208"}


id: MONDO:0033630
data:
  {"annotated_genes":["SJAG_00769"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85232],"is_not":false,"summary":null,"term":"MONDO:0033630"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00769":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with speech impairment and dysmorphic facies","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070417","GARD:18530","MEDGEN:1758434","UMLS:C5436699","OMIM:619056"],"synonyms":[{"name":"NEDSID","type":"exact"}],"termid":"MONDO:0033630","terms_by_termid":{"MONDO:0033630":null},"xrefs":{"Monarch":{"xref_id":"0033630"}}}


id: PBO:0000622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf111","termid":"PBO:0000622"}


id: MONDO:0011047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by sensorineural deafness, short stature, femoral epiphyseal dysplasia, umbilical and inguinal hernias and developmental delay (growth retardation and mild intellectual deficit).","definition_xrefs":["Orphanet:3218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness-epiphyseal dysplasia-short stature syndrome","secondary_identifiers":["GARD:1688","MEDGEN:371330","OMIM:601351","SCTID:716238003","UMLS:C1832438","MESH:C535928"],"synonyms":[{"name":"chitty-Hall-Baraitser syndrome","type":"exact"},{"name":"deafness, epiphyseal dysplasia, short stature","type":"related"},{"name":"deafness, femoral epiphyseal dysplasia, short stature and developmental delay","type":"related"},{"name":"growth retardation, deafness, femoral epiphyseal dysplasia, and lacrimal duct obstruction","type":"related"}],"termid":"MONDO:0011047","xrefs":{"Monarch":{"xref_id":"0011047"}}}


id: PBO:0083710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein involved in a late step of GPI anchor assembly; involved in the addition of phosphoethanolamine to the multiply mannosylated glycosylphosphatidylinositol (GPI) intermediate; human PIG-Fp is a functional homolog","termid":"PBO:0083710"}


id: PBO:0036038
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K4_dimethylation_at_protein_coding_gene_during_vegetative_growth","termid":"PBO:0036038"}


id: MONDO:0003264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A basal cell carcinoma which displays squamous differentiation. The neoplastic cells have more abundant cytoplasm with more marked keratinization than typical basal cell carcinomas. It usually has a more aggressive clinical course compared to typical basal cell carcinoma, and it may produce regional or widespread metastases.","definition_xrefs":["NCIT:C2922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"basosquamous carcinoma","secondary_identifiers":["SCTID:254702000","MONDO:0006413","ICDO:8094/3","MEDGEN:2841","MESH:D002281","EFO:1000529","UMLS:C0007118","DOID:5063"],"synonyms":[{"name":"Basisquamous cell carcinoma","type":"exact"},{"name":"basosquamous carcinoma","type":"exact"},{"name":"basosquamous cell carcinoma","type":"exact"},{"name":"basosquamous tumor, malignant","type":"exact"},{"name":"metatypical carcinoma","type":"exact"},{"name":"metatypical carcinoma (morphologic abnormality)","type":"exact"},{"name":"skin basosquamous cell carcinoma","type":"exact"},{"name":"skin mixed basal and squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0003264","xrefs":{"Monarch":{"xref_id":"0003264"}}}


id: MONDO:0008405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete scapula, contour of vertebral border of (obsolete MONDO:0008405)","secondary_identifiers":["OMIM:181300"],"synonyms":[{"name":"scapula, contour of vertebral border of","type":"exact"}],"termid":"MONDO:0008405","xrefs":{"Monarch":{"xref_id":"0008405"}}}


id: GO:0018619
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzene + H+ + NADH + O2 = cis-cyclohexa-3,5-diene-1,2-diol + NAD+.","definition_xrefs":["EC:1.14.12.3","RHEA:13813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"benzene 1,2-dioxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0079","KEGG_REACTION:R03543","MetaCyc:BENZENE-12-DIOXYGENASE-RXN"],"synonyms":[{"name":"benzene dioxygenase activity","type":"related"},{"name":"benzene hydroxylase activity","type":"related"},{"name":"benzene,NADH:oxygen oxidoreductase (1,2-hydroxylating)","type":"related"}],"termid":"GO:0018619"}


id: MONDO:0044250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tongue curling, folding, or rolling (obsolete MONDO:0044250)","secondary_identifiers":["OMIM:189300"],"synonyms":[{"name":"cloverleaf tongue","type":"related"},{"name":"tongue curling, folding, or rolling","type":"related"},{"name":"trefoil tongue","type":"related"}],"termid":"MONDO:0044250","xrefs":{"Monarch":{"xref_id":"0044250"}}}


id: PBO:0068588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 39, pseudogene","termid":"PBO:0068588"}


id: PBO:0063447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 7B","termid":"PBO:0063447"}


id: GO:0075165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism modulates the frequency, rate or extent of its G-protein gamma subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of G-protein gamma subunit-mediated signal transduction in response to host (obsolete GO:0075165)","synonyms":[{"name":"regulation of symbiont G-protein gamma subunit-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075165"}


id: PBO:0083714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein that plays a central role in ERAD; forms HRD complex with Hrd1p and ER-associated protein degradation (ERAD) determinants that engages in lumen to cytosol communication and coordination of ERAD events","termid":"PBO:0083714"}


id: MONDO:0018117
data:
  {"annotated_genes":["SJAG_02885","SJAG_04323","SJAG_04110","SJAG_01356","SJAG_04178","SJAG_02305","SJAG_02119","SJAG_01918","SJAG_00404"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86130,86129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013760"},{"annotations":[84497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010155"},{"annotations":[85420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013584"},{"annotations":[85799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012787"},{"annotations":[85836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011246"},{"annotations":[86431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008086"},{"annotations":[86524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013337"},{"annotations":[85176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008922"},{"annotations":[85778,85779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014417"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00404":null,"SJAG_01356":null,"SJAG_01918":null,"SJAG_02119":null,"SJAG_02305":null,"SJAG_02885":null,"SJAG_04110":null,"SJAG_04178":null,"SJAG_04323":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:21516","MEDGEN:1843236","Orphanet:352301","UMLS:C5680990"],"termid":"MONDO:0018117","terms_by_termid":{"MONDO:0008086":null,"MONDO:0008922":null,"MONDO:0010155":null,"MONDO:0011246":null,"MONDO:0012787":null,"MONDO:0013337":null,"MONDO:0013584":null,"MONDO:0013760":null,"MONDO:0014417":null},"xrefs":{"Monarch":{"xref_id":"0018117"}}}


id: GO:1990634
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to protein phosphatase 5.","definition_xrefs":["PMID:8943293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphatase binding","termid":"GO:0019903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"protein phosphatase 5 binding","synonyms":[{"name":"protein phosphatase T binding","type":"exact"}],"termid":"GO:1990634"}


id: GO:0097227
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The ring-like, filamentous structure located at the distal end of the midpiece of the sperm flagellum; the annulus is thought to form a diffusion barrier between the midpiece and the principal piece and serve as a stabilizing structure for tail rigidity.","definition_xrefs":["MP:0009834","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sperm flagellum","termid":"GO:0036126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm annulus","termid":"GO:0097227"}


id: PBO:0051996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junction adhesion molecule like","termid":"PBO:0051996"}


id: PBO:0039387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amylase alpha 2A","termid":"PBO:0039387"}


id: PBO:0059348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S14","termid":"PBO:0059348"}


id: MONDO:0009922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pseudouridinuria and mental defect","secondary_identifiers":["MEDGEN:376629","MESH:C564864","UMLS:C1849648","OMIM:264500"],"synonyms":[{"name":"Pseudouridinuria and mental defect","type":"exact"}],"termid":"MONDO:0009922","xrefs":{"Monarch":{"xref_id":"0009922"}}}


id: GO:0030370
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a receptor for intercellular adhesion molecule-3 (ICAM-3), such as DC-SIGN and LFA-1.","definition_xrefs":["GOC:ceb","PMID:11473836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"intercellular adhesion molecule-3 receptor binding","synonyms":[{"name":"ICAM-3 receptor binding","type":"exact"},{"name":"ICAM-3 receptor ligand","type":"narrow"},{"name":"intercellular adhesion molecule-3 receptor ligand","type":"narrow"}],"termid":"GO:0030370"}


id: GO:0060153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a virus interferes with the normal progression through the host cell cycle. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete perturbation by virus of host cell cycle progression (obsolete GO:0060153)","synonyms":[{"name":"modulation by virus of host cell cycle","type":"related"},{"name":"modulation of host cell cycle by virus","type":"exact"},{"name":"regulation by virus of host cell cycle","type":"exact"},{"name":"regulation of host cell cycle by virus","type":"exact"},{"name":"viral process regulating host cell cycle","type":"exact"}],"termid":"GO:0060153"}


id: PBO:0056925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myo-inositol oxygenase","termid":"PBO:0056925"}


id: PBO:0109047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase complex MRG family subunit Alp13/Eaf3","termid":"PBO:0109047"}


id: PR:000027509
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An M-phase inducer phosphatase unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PomBase:MAH","PMID:9774107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"M-phase inducer phosphatase","termid":"PR:000027506"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-phase inducer phosphatase unmodified form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC24H6.05","synonyms":[{"name":"Spom-cdc25/UnMod","type":"exact"}],"termid":"PR:000027509"}


id: PR:000037317
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein complex that is composed of a dimer of phosphorylated Crb2.","definition_xrefs":["PMID:24074952","PomBase:AL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Crb2 dimer (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC342.05","synonyms":[{"name":"DNA repair protein rhp9 dimer","type":"exact"}],"termid":"PR:000037317"}


id: PBO:0025475
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystinuria","termid":"PBO:0025475"}


id: MONDO:0015207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A esophageal malformation that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic esophageal malformation (obsolete MONDO:0015207)","secondary_identifiers":["Orphanet:108959"],"synonyms":[{"name":"isolated esophageal malformation","type":"exact"},{"name":"nonsyndromic esophageal malformation","type":"exact"}],"termid":"MONDO:0015207","xrefs":{"Monarch":{"xref_id":"0015207"}}}


id: FYPO:0008136
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which translational readthough of a stop codon is normal (i.e. indistinguishable from wild-type) during cytoplasmic translation.","definition_xrefs":["PMID:37805140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal stop codon readthrough","termid":"FYPO:0008136"}


id: GO:0140361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cyclic-GMP-AMP from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:31126740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"purine ribonucleotide transport","termid":"GO:0015868"},{"relation_name":"is_a","term_name":"adenine nucleotide transport","termid":"GO:0051503"},{"relation_name":"is_a","term_name":"cyclic nucleotide transport","termid":"GO:0070729"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"guanine nucleotide transmembrane transport","termid":"GO:1903790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"cyclic-GMP-AMP transmembrane import across plasma membrane","termid":"GO:0140361"}


id: MONDO:0011844
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A myoclonic dystonia characterized by autosomal dominant inheritance that has material basis in variation in the chromosome region 18p11.","definition_xrefs":["DOID:0090035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoclonus-dystonia syndrome","termid":"MONDO:0000903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"myoclonic dystonia 15","secondary_identifiers":["NANDO:1200528","MEDGEN:334492","OMIM:607488","GARD:9629","UMLS:C1843786","Orphanet:210566","MESH:C538002"],"synonyms":[{"name":"DYT15","type":"related"},{"name":"dystonia 15, myoclonic","type":"related"},{"name":"dystonia-15, myoclonic","type":"exact"},{"name":"myoclonic dystonia type 15","type":"exact"}],"termid":"MONDO:0011844","xrefs":{"Monarch":{"xref_id":"0011844"}}}


id: PBO:0045570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 19","termid":"PBO:0045570"}


id: PATO:0000993
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000993 relative viscosity (obsolete PATO:0000993)","termid":"PATO:0000993"}


id: PBO:0031515
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_binding","termid":"PBO:0031515"}


id: MONDO:0700096
data:
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