# terms

id: FYPO:0001387
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118651,118652,118653,119057],"is_not":false,"summary":null,"term":"FYPO:0001387"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable when cells are grown at a temperature higher than standard.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null,"SJAG_04464":null},"genotype_count":4,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"loss of viability at high temperature","references_by_uniquename":{"PMID:23786411":null,"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_01956","SJAG_03575","SJAG_04464","SJAG_03351"],"single_locus_genotype_uniquenames":["apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"decreased viability at high temperature","type":"exact"},{"name":"loss of cell population viability at high temperature","type":"exact"},{"name":"loss of viability at restrictive temperature","type":"related"},{"name":"reduced viability at high temperature","type":"exact"}],"termid":"FYPO:0001387","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0001387":null}}


id: PATO:0000997
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000997 relative viscosity value (obsolete PATO:0000997)","termid":"PATO:0000997"}


id: PBO:0057903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3591","termid":"PBO:0057903"}


id: GO:0050265
data:
  {"annotated_genes":["SJAG_02383","SJAG_02370"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90268,91160],"is_not":false,"summary":null,"term":"GO:0050265"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UTP + RNA(n) = diphosphate + RNA(n+1).","definition_xrefs":["MetaCyc:RNA-URIDYLYLTRANSFERASE-RXN","EC:2.7.7.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uridylyltransferase activity","termid":"GO:0070569"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02370":null,"SJAG_02383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140098","GO:0016779","GO:0016740"],"is_obsolete":false,"name":"RNA uridylyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:14785","Reactome:R-HSA-8941312"],"synonyms":[{"name":"TUT activity","type":"related"},{"name":"UTP:RNA uridylyltransferase activity","type":"exact"},{"name":"poly(U) polymerase activity","type":"exact"},{"name":"polynucleotide uridylyltransferase activity","type":"exact"},{"name":"terminal uridylyltransferase activity","type":"related"}],"termid":"GO:0050265","terms_by_termid":{"GO:0050265":null}}


id: PBO:0075845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU72 like 6","termid":"PBO:0075845"}


id: GO:0102283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: C20 sphinganine(1+) + NADP = C20 3-dehydrosphinganine(1+) + NADPH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-ketodihydrosphinganine (C20) reductase activity (obsolete GO:0102283)","termid":"GO:0102283"}


id: PBO:0049384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIC subunit 6","termid":"PBO:0049384"}


id: GO:0018874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving benzoate, the anion of benzoic acid (benzenecarboxylic acid), a fungistatic compound widely used as a food preservative; it is conjugated to glycine in the liver and excreted as hippuric acid.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"benzoate metabolic process","secondary_identifiers":["UM-BBD_pathwayID:benz2"],"synonyms":[{"name":"benzoate metabolism","type":"exact"}],"termid":"GO:0018874"}


id: PBO:0058431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4801","termid":"PBO:0058431"}


id: GO:0047704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + taurolithocholate = adenosine 3',5'-bisphosphate + taurolithocholate sulfate.","definition_xrefs":["EC:2.8.2.14","MetaCyc:BILE-SALT-SULFOTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016782"],"is_obsolete":false,"name":"bile-salt sulfotransferase activity","secondary_identifiers":["RHEA:14013"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:glycolithocholate sulfotransferase activity","type":"related"},{"name":"BAST I activity","type":"narrow"},{"name":"bile acid sulfotransferase I activity","type":"narrow"},{"name":"bile acid:3'-phosphoadenosine-5'-phosphosulfate sulfotransferase activity","type":"related"},{"name":"bile salt:3'phosphoadenosine-5'-phosphosulfate:sulfotransferase activity","type":"related"},{"name":"bile-salt sulphotransferase activity","type":"exact"},{"name":"glycolithocholate sulfotransferase activity","type":"narrow"}],"termid":"GO:0047704"}


id: GO:0008701
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxy-2-oxopentanoate = acetaldehyde + pyruvate.","definition_xrefs":["EC:4.1.3.39","RHEA:22624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-hydroxy-2-oxovalerate aldolase activity","secondary_identifiers":["UM-BBD_enzymeID:r0100","MetaCyc:MHPELY-RXN","GO:0018804","KEGG_REACTION:R00750"],"synonyms":[{"name":"4-hydroxy-2-ketovalerate aldolase activity","type":"related"},{"name":"4-hydroxy-2-oxopentanoate pyruvate-lyase (acetaldehyde-forming) activity","type":"related"},{"name":"4-hydroxy-2-oxopentanoate pyruvate-lyase activity","type":"related"},{"name":"4-hydroxy-2-oxovalerate pyruvate-lyase activity","type":"related"},{"name":"DmpG","type":"related"},{"name":"HOA","type":"related"}],"termid":"GO:0008701"}


id: MOD:01514
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modifications that have monoisotopic mass differences from their respective origins that are nominally equal (sometimes called isobaric) at a resolution below 0.01 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at a resolution below 0.1 Da","termid":"MOD:01513"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modifications with monoisotopic mass differences that are nominally equal at a resolution below 0.01 Da","termid":"MOD:01514"}


id: FYPO:0001802
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is longer than normal during a cellular response to caffeine.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete elongated cell during cellular response to caffeine (obsolete FYPO:0001802)","synonyms":[{"name":"elongated cell during cellular response to caffeine during mitotic cell cycle","type":"related"},{"name":"elongated cell during cellular response to caffeine during vegetative growth","type":"exact"},{"name":"elongated in response to caffeine","type":"exact"}],"termid":"FYPO:0001802"}


id: PBO:0064491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I and III subunit D","termid":"PBO:0064491"}


id: FYPO:0006708
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation","termid":"FYPO:0002678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"abolished protein phosphorylation during glucose starvation","synonyms":[{"name":"abolished protein phosphorylation during cellular response to glucose starvation","type":"exact"},{"name":"abolished protein phosphorylation during glucose deprivation","type":"exact"},{"name":"protein phosphorylation abolished during glucose starvation","type":"exact"}],"termid":"FYPO:0006708"}


id: FYPO:0005068
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites of double-strand breaks in DNA is greater than normal during S phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:18180284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of double-strand break sites during vegetative growth","termid":"FYPO:0000455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased number of double-strand break sites during mitotic S phase","synonyms":[{"name":"accumulation of DNA damage foci during mitotic S phase","type":"related"},{"name":"accumulation of double-strand break sites during mitotic S phase","type":"exact"},{"name":"increased number of DNA damage foci during mitotic S phase","type":"related"},{"name":"increased number of double-strand break sites during S phase during vegetative growth","type":"exact"},{"name":"increased number of double-strand break sites during S phase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0005068"}


id: PBO:0064512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit J4, pseudogene","termid":"PBO:0064512"}


id: GO:0010441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the guard cell over time, from its formation to the mature structure.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"guard cell differentiation","termid":"GO:0010052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"guard cell development","termid":"GO:0010441"}


id: GO:0033948
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing (2->1) linked beta-D-fructofuranose residues in fructans.","definition_xrefs":["EC:3.2.1.153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"fructan beta-(2,1)-fructosidase activity","secondary_identifiers":["MetaCyc:3.2.1.153-RXN"],"synonyms":[{"name":"1-FEH II","type":"related"},{"name":"1-FEH w1","type":"related"},{"name":"1-FEH w2","type":"related"},{"name":"1-fructan exohydrolase activity","type":"related"},{"name":"beta-(2,1)-D-fructan fructohydrolase activity","type":"related"},{"name":"beta-(2,1)-fructan exohydrolase activity","type":"related"},{"name":"beta-(2,1)-linkage-specific fructan-beta-fructosidase activity","type":"related"}],"termid":"GO:0033948"}


id: PBO:0081064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CW-type and PWWP domain containing 1","termid":"PBO:0081064"}


id: MONDO:0020713
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary venoocclusive disease","termid":"MONDO:0009937"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary venoocclusive disease 1","secondary_identifiers":["OMIM:265450","MEDGEN:854500","UMLS:C3887658","DOID:0081268"],"synonyms":[{"name":"PVOD1","type":"exact"},{"name":"pulmonary venoocclusive disease 1, autosomal dominant","type":"related"}],"termid":"MONDO:0020713","xrefs":{"Monarch":{"xref_id":"0020713"}}}


id: PBO:0067946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 248","termid":"PBO:0067946"}


id: GO:1901516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving aspyridone A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"aspyridone A metabolic process","synonyms":[{"name":"aspyridone A metabolism","type":"exact"}],"termid":"GO:1901516"}


id: PBO:0052374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 19","termid":"PBO:0052374"}


id: PBO:0077078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIR domain containing adaptor molecule 1","termid":"PBO:0077078"}


id: FYPO:0009113
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle polar microtubules during anaphase B does not occur.","definition_xrefs":["PMID:34080538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to mitotic spindle during mitosis","termid":"FYPO:0004754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to mitotic spindle polar microtubules during anaphase B","synonyms":[{"name":"abolished protein localisation to interpolar microtubules during mitotic anaphase B","type":"exact"},{"name":"abolished protein localisation to mitotic spindle polar microtubules during anaphase B","type":"exact"},{"name":"abolished protein localization to interpolar microtubules during mitotic anaphase B","type":"exact"}],"termid":"FYPO:0009113"}


id: MONDO:0017812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare PIK3CA-related overgrowth syndrome disease characterized by segmental and progressive overgrowth, predominantly involving the adipose tissue, or a mixture of adipose and fibrous tissue, with variable involvement of subcutaneous and muscular tissue, as well as skeletal overgrowth. Overgrowth severity and range is highly variable, although frequently it is asymmetric and disproportionate, it affects lower extremities more than the upper ones, and progresses in a distal to proximal patten. Congenital overgrowth is typically associated.","definition_xrefs":["Orphanet:314662"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"overgrowth syndrome","termid":"MONDO:0019716"},{"relation_name":"is_a","term_name":"PIK3CA-related overgrowth spectrum","termid":"MONDO:1040002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"segmental progressive overgrowth syndrome with fibroadipose hyperplasia","secondary_identifiers":["UMLS:C5192432","GARD:21384","MEDGEN:1673986"],"termid":"MONDO:0017812","xrefs":{"Monarch":{"xref_id":"0017812"}}}


id: MONDO:0016357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"neonatal osteosclerotic dysplasia","termid":"MONDO:0019702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"dysplastic cortical hyperostosis","secondary_identifiers":["icd11.foundation:607086753","Orphanet:646139","MEDGEN:1683894","UMLS:C5190839"],"termid":"MONDO:0016357","xrefs":{"Monarch":{"xref_id":"0016357"}}}


id: GO:0060960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a neuron of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate commitment","termid":"GO:0048663"},{"relation_name":"is_a","term_name":"cardiac cell fate commitment","termid":"GO:0060911"},{"relation_name":"part_of","term_name":"cardiac neuron differentiation","termid":"GO:0060945"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac neuron fate commitment","synonyms":[{"name":"heart neuron fate commitment","type":"exact"}],"termid":"GO:0060960"}


id: MONDO:0021495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the sublingual gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sublingual gland neoplasm","termid":"MONDO:0021242"},{"relation_name":"is_a","term_name":"benign neoplasm of major salivary gland","termid":"MONDO:0021492"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of sublingual gland","secondary_identifiers":["MEDGEN:83858","SCTID:92413008","UMLS:C0347208","NCIT:C4601"],"synonyms":[{"name":"benign neoplasm of the sublingual gland","type":"exact"},{"name":"benign sublingual gland neoplasm","type":"exact"},{"name":"benign sublingual gland tumor","type":"exact"},{"name":"benign sublingual gland tumour","type":"exact"},{"name":"benign tumor of sublingual gland","type":"exact"},{"name":"benign tumor of the sublingual gland","type":"exact"},{"name":"benign tumour of sublingual gland","type":"exact"},{"name":"benign tumour of the sublingual gland","type":"exact"},{"name":"sublingual gland benign neoplasm","type":"exact"}],"termid":"MONDO:0021495","xrefs":{"Monarch":{"xref_id":"0021495"}}}


id: GO:1900753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a doxorubicin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:19063901","PMID:15090538","PMID:19651502","PMID:9651400","PMID:12057006","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"glycoside transport","termid":"GO:1901656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"doxorubicin transport","synonyms":[{"name":"(1S,3S)-3,5,12-trihydroxy-3-(hydroxyacetyl)-10-methoxy-6,11-dioxo-1,2,3,4,6,11-hexahydrotetracen-1-yl 3-amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranoside transport","type":"exact"},{"name":"(1S,3S)-3-glycoloyl-3,5,12-trihydroxy-10-methoxy-6,11-dioxo-1,2,3,4,6,11-hexahydrotetracen-1-yl 3-amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranoside transport","type":"related"},{"name":"(8S-cis)-10-((3-amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranosyl)oxy)-7,8,9,10-tetrahydro-6,8,11-trihydroxy-8-(hydroxyacetyl)-1-methoxy-5,12-naphthacenedione transport","type":"related"},{"name":"14-hydroxydaunomycin transport","type":"related"},{"name":"14-hydroxydaunorubicine transport","type":"related"},{"name":"Adriamycin transport","type":"related"},{"name":"doxorubicine transport","type":"related"},{"name":"doxorubicinum transport","type":"related"}],"termid":"GO:1900753"}


id: PBO:0054971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2385","termid":"PBO:0054971"}


id: PBO:0082921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytochrome c isoform 2, expressed under hypoxic conditions; also known as iso-2-cytochrome c; electron carrier of the mitochondrial intermembrane space that transfers electrons from ubiquinone-cytochrome c oxidoreductase to cytochrome c oxidase during cellular respiration; protein abundance increases in response to DNA replication stress; CYC7 has a paralog, CYC1, that arose from the whole genome duplication","termid":"PBO:0082921"}


id: PBO:0085144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar S-adenosylmethionine-dependent rRNA methyltransferase; methylates adenine (m1A) of large subunit (LSU) rRNA at position 2142; belongs to Rossmann fold superfamily; null mutant exhibits abnormal lipid metabolic phenotype; not an essential gene","termid":"PBO:0085144"}


id: MONDO:0010179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated right ventricular hypoplasia (IRVH) is a rare congenital heart malformation characterized by underdevelopment of the right ventricle associated with patent foramen ovale or interauricular communication and normally developed tricuspid and pulmonary valves. IRVH manifests with severe cyanosis, congestive heart failure, and in severe cases, death in early infancy.","definition_xrefs":["Orphanet:439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"hypoplastic right heart syndrome","termid":"MONDO:0020291"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated right ventricular hypoplasia","secondary_identifiers":["SCTID:718135001","GARD:4721","OMIM:277200","UMLS:C1848587","MESH:C535682","MEDGEN:336377"],"synonyms":[{"name":"Irvh","type":"related"},{"name":"hypoplasia of the right ventricle","type":"related"},{"name":"isolated hypoplasia of the right ventricle","type":"related"},{"name":"right ventricle hypoplasia","type":"related"},{"name":"right ventricular hypoplasia","type":"related"},{"name":"right ventricular hypoplasia, isolated","type":"related"}],"termid":"MONDO:0010179","xrefs":{"Monarch":{"xref_id":"0010179"}}}


id: MONDO:0014807
data:
  {"annotated_genes":["SJAG_03106"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85296],"is_not":false,"summary":null,"term":"MONDO:0014807"}]},"cv_name":"mondo","definition":"Any prenatal-onset spinal muscular atrophy with congenital bone fractures in which the cause of the disease is a mutation in the ASCC1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenatal-onset spinal muscular atrophy with congenital bone fractures","termid":"MONDO:0000209"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03106":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002320"],"is_obsolete":false,"name":"spinal muscular atrophy with congenital bone fractures 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4225176","MEDGEN:907910","OMIM:616867","GARD:18495"],"synonyms":[{"name":"ASCC1 prenatal-onset spinal muscular atrophy with congenital bone fractures","type":"exact"},{"name":"SMABF2","type":"exact"},{"name":"prenatal-onset spinal muscular atrophy with congenital bone fractures caused by mutation in ASCC1","type":"exact"},{"name":"spinal muscular atrophy with congenital bone fractures 2","type":"exact"},{"name":"spinal muscular atrophy with congenital bone fractures type 2","type":"exact"}],"termid":"MONDO:0014807","terms_by_termid":{"MONDO:0014807":null},"xrefs":{"Monarch":{"xref_id":"0014807"}}}


id: GO:0051511
data:
  {"annotated_genes":["SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of unidimensional cell growth, the process in which a cell irreversibly increases in size in one [spatial] dimension or along one axis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell morphogenesis","termid":"GO:0010771"},{"relation_name":"is_a","term_name":"negative regulation of cell growth","termid":"GO:0030308"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"regulation of unidimensional cell growth","termid":"GO:0051510"},{"relation_name":"negatively_regulates","term_name":"unidimensional cell growth","termid":"GO:0009826"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02169":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of unidimensional cell growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of unidimensional cell growth","type":"exact"},{"name":"down-regulation of unidimensional cell growth","type":"exact"},{"name":"downregulation of unidimensional cell growth","type":"exact"},{"name":"inhibition of unidimensional cell growth","type":"narrow"},{"name":"negative regulation of cell elongation","type":"narrow"}],"termid":"GO:0051511","terms_by_termid":{"GO:0051517":null}}


id: PBO:0004634
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.13","termid":"PBO:0004634"}


id: GO:0070120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a ciliary neurotrophic factor (CNTF) to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"ciliary neurotrophic factor-mediated signaling pathway","synonyms":[{"name":"CNTF-mediated signaling pathway","type":"exact"},{"name":"ciliary neurotrophic factor-mediated signalling pathway","type":"exact"}],"termid":"GO:0070120"}


id: PBO:0061152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMNAT1 pseudogene 4","termid":"PBO:0061152"}


id: GO:0101013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a sodium ion by a voltage-gated channel whose activity is modulated in response to mechanical stress. Response to mechanical stress and voltage gating together is different than the sum of individual responses. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["PMID:21041530","PMID:26838316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated sodium channel activity","termid":"GO:0005248"},{"relation_name":"is_a","term_name":"mechanosensitive monoatomic cation channel activity","termid":"GO:0140135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"mechanosensitive voltage-gated sodium channel activity","synonyms":[{"name":"mechanically-modulated voltage-gated sodium channel activity","type":"exact"}],"termid":"GO:0101013"}


id: PBO:0082931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic and mitochondrial histidine tRNA synthetase; efficient mitochondrial localization requires both a presequence and an amino-terminal sequence; mutations in human ortholog HARS2 are associated with Perrault syndrome","termid":"PBO:0082931"}


id: PBO:0017910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMS complex subunit Mis13","termid":"PBO:0017910"}


id: MONDO:1010770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bullous pemphigoid that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bullous pemphigoid, non-human animal","termid":"MONDO:1010137"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bullous pemphigoid, dog","secondary_identifiers":["OMIA:001183-9615"],"termid":"MONDO:1010770","xrefs":{"Monarch":{"xref_id":"1010770"}}}


id: PBO:0012255
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratrico peptide repeat","termid":"PBO:0012255"}


id: PBO:0082597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Class II abasic (AP) endonuclease involved in repair of DNA damage; resolves blocked 3' ends that result from removal of misincorporated nucleotides; homolog of human HAP1 and E. coli exoIII","termid":"PBO:0082597"}


id: PBO:0064052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 86","termid":"PBO:0064052"}


id: GO:0034480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1,2-diacyl-sn-glycero-3-phosphocholine + H2O = a 1,2-diacyl-sn-glycerol + H+ + phosphocholine.","definition_xrefs":["RHEA:10604","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C activity","termid":"GO:0004629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"phosphatidylcholine phospholipase C activity","secondary_identifiers":["EC:3.1.4.3","Reactome:R-HSA-9680388","MetaCyc:PHOSPHOLIPASE-C-RXN"],"synonyms":[{"name":"Clostridium oedematiens beta- and gamma-toxins activity","type":"narrow"},{"name":"Clostridium welchii alpha-toxin activity","type":"narrow"},{"name":"heat-labile hemolysin","type":"narrow"},{"name":"lipophosphodiesterase I activity","type":"related"},{"name":"phosphatidylcholine cholinephosphohydrolase activity","type":"related"},{"name":"phospholipase C, acting on phosphatidylcholine","type":"exact"}],"termid":"GO:0034480"}


id: MONDO:0032869
data:
  {"annotated_genes":["SJAG_07003"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86357],"is_not":false,"summary":null,"term":"MONDO:0032869"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial proton-transporting ATP synthase complex deficiency","termid":"MONDO:0014471"}],"gene_count":1,"genes_by_uniquename":{"SJAG_07003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 5 (ATP synthase) deficiency, nuclear type 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618683","GARD:18673","MEDGEN:1684729","UMLS:C5231461","DOID:0111749"],"synonyms":[{"name":"MC5DN6","type":"related"},{"name":"MITOCHONDRIAL COMPLEX V (ATP SYNTHASE) DEFICIENCY, NUCLEAR TYPE 6","type":"related"}],"termid":"MONDO:0032869","terms_by_termid":{"MONDO:0032869":null},"xrefs":{"Monarch":{"xref_id":"0032869"}}}


id: GO:0035180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a third instar larva through a substrate in search of a pupation site. This movement occurs without feeding and is characterized by short bursts of forward movement, separated by stops and repeated side-to-side head probes, followed normally by a change in direction.","definition_xrefs":["PMID:12956960","PMID:12848927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larval locomotory behavior","termid":"GO:0008345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval wandering behavior","synonyms":[{"name":"larval wandering behaviour","type":"exact"}],"termid":"GO:0035180"}


id: GO:0035766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell in response to the presence of fibroblast growth factor (FGF).","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"},{"relation_name":"part_of","term_name":"cellular response to fibroblast growth factor stimulus","termid":"GO:0044344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell chemotaxis to fibroblast growth factor","termid":"GO:0035766"}


id: GO:0046297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 2,4-dichlorobenzoate, a chlorinated aromatic compound which is a key intermediate in the aerobic degradation of polychlorinated biphenyls (PCBs).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4-dichlorobenzoate biosynthetic process (obsolete GO:0046297)","synonyms":[{"name":"2,4-dichlorobenzoate anabolism","type":"exact"},{"name":"2,4-dichlorobenzoate biosynthesis","type":"exact"},{"name":"2,4-dichlorobenzoate biosynthetic process","type":"exact"},{"name":"2,4-dichlorobenzoate formation","type":"exact"},{"name":"2,4-dichlorobenzoate synthesis","type":"exact"}],"termid":"GO:0046297"}


id: MONDO:0004546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the lumbar nerve plexus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lumbosacral plexus lesion","termid":"MONDO:0001829"},{"relation_name":"is_a","term_name":"nerve plexus neoplasm","termid":"MONDO:0003100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"lumbar plexus neoplasm","secondary_identifiers":["DOID:8389","MEDGEN:272802","NCIT:C5824","UMLS:C1334437"],"synonyms":[{"name":"lumbar nerve plexus neoplasm","type":"exact"},{"name":"lumbar nerve plexus neoplasm (disease)","type":"exact"},{"name":"lumbar nerve plexus tumor","type":"exact"},{"name":"lumbar nerve plexus tumour","type":"exact"},{"name":"lumbar plexus neoplasms","type":"exact"},{"name":"lumbar plexus tumor","type":"exact"},{"name":"lumbar plexus tumour","type":"exact"},{"name":"neoplasm of lumbar nerve plexus","type":"exact"},{"name":"neoplasm of lumbar plexus","type":"exact"},{"name":"neoplasm of the lumbar plexus","type":"exact"},{"name":"tumor of lumbar nerve plexus","type":"exact"},{"name":"tumor of lumbar plexus","type":"exact"},{"name":"tumor of the lumbar plexus","type":"exact"},{"name":"tumour of lumbar nerve plexus","type":"exact"},{"name":"tumour of lumbar plexus","type":"exact"},{"name":"tumour of the lumbar plexus","type":"exact"}],"termid":"MONDO:0004546","xrefs":{"Monarch":{"xref_id":"0004546"}}}


id: GO:0046559
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an alpha-D-glucuronoside + H2O = an alcohol + D-glucuronate.","definition_xrefs":["EC:3.2.1.139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"alpha-glucuronidase activity","secondary_identifiers":["MetaCyc:3.2.1.139-RXN","RHEA:20005"],"synonyms":[{"name":"alpha-D-glucosiduronate glucuronohydrolase activity","type":"related"},{"name":"alpha-glucosiduronase activity","type":"related"}],"termid":"GO:0046559"}


id: PBO:0060817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal EF-hand calcium binding protein 2","termid":"PBO:0060817"}


id: PBO:0056851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microsomal glutathione S-transferase 3","termid":"PBO:0056851"}


id: MONDO:0010395
data:
  {"annotated_genes":["SJAG_04882","SJAG_03811"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86728,86729],"is_not":false,"summary":null,"term":"MONDO:0010395"}]},"cv_name":"mondo","definition":"Phosphoribosylpyrophosphate (PRPP) synthetase superactivity is an X-linked disorder of purine metabolism associated with hyperuricemia and hyperuricosuria, comprised of two forms: an early-onset severe form characterized by gout, urolithiasis, and neurodevelopmental anomalies (severe PRPP synthetase superactivity) and a mild late-onset form with no neurologic involvement (mild PRPP synthetase superactivity).","definition_xrefs":["Orphanet:3222"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"inborn disorder of purine metabolism","termid":"MONDO:0019236"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03811":null,"SJAG_04882":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"}],"interesting_parent_ids":["MONDO:0019254","MONDO:0005066"],"is_obsolete":false,"name":"phosphoribosylpyrophosphate synthetase superactivity","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C567064","GARD:4337","SCTID:723454008","OMIM:300661","MEDGEN:370358","UMLS:C1970827","DOID:0111260"],"synonyms":[{"name":"PRPP synthetase superactivity","type":"exact"},{"name":"PRPS1 superactivity","type":"exact"},{"name":"gout, PRPS-related","type":"related"},{"name":"gout, PRPS-related, X-linked recessive","type":"exact"},{"name":"phosphoribosylpyrophosphate synthetase superactivity","type":"exact"},{"name":"phosphoribosylpyrophosphate synthetase superactivity, X-linked recessive","type":"exact"}],"termid":"MONDO:0010395","terms_by_termid":{"MONDO:0010395":null},"xrefs":{"Monarch":{"xref_id":"0010395"}}}


id: MOD:01130
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SucPhencarb Lysyl","termid":"MOD:01130"}


id: PBO:0044386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily A member 13","termid":"PBO:0044386"}


id: PBO:0039382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminomethyltransferase","termid":"PBO:0039382"}


id: PBO:0027677
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitochondrial_translation","termid":"PBO:0027677"}


id: MONDO:0002226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An urogenital tuberculosis involving a pathogenic inflammatory response in the ovary.","definition_xrefs":["MONDO:patterns/specific_inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urogenital tuberculosis","termid":"MONDO:0006002"},{"relation_name":"is_a","term_name":"oophoritis","termid":"MONDO:0006877"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberculous oophoritis","secondary_identifiers":["DOID:2148","icd11.foundation:1634640694","MEDGEN:546959","ICD9:016.6","ICD9:016.60","SCTID:84194006","UMLS:C0275932"],"termid":"MONDO:0002226","xrefs":{"Monarch":{"xref_id":"0002226"}}}


id: PBO:0067162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 215, pseudogene","termid":"PBO:0067162"}


id: PBO:0063989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 23","termid":"PBO:0063989"}


id: PBO:0080669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 21, pseudogene","termid":"PBO:0080669"}


id: GO:0018175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a nucleotide to a protein amino acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein nucleotidylation","synonyms":[{"name":"protein amino acid nucleotidylation","type":"exact"}],"termid":"GO:0018175"}


id: PBO:0056437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 10","termid":"PBO:0056437"}


id: MONDO:0001673
data:
  {"annotated_genes":["SJAG_00938","SJAG_03011","SJAG_04049","SJAG_02463","SJAG_01941","SJAG_04059"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85925,85924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014375"},{"annotations":[84974,84973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008964"},{"annotations":[84805,84804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009635"}]},"cv_name":"mondo","definition":"The condition of having at least three loose or liquid bowel movements each day.","definition_xrefs":["Wikipedia:Diarrhea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_01941":null,"SJAG_02463":null,"SJAG_03011":null,"SJAG_04049":null,"SJAG_04059":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"diarrheal disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:713159","SCTID:111939009","NCIT:C2987","MESH:D003967","DOID:13250","UMLS:C1290807","ICD9:009.2","SCTID:128333008","HP:0002014"],"synonyms":[{"name":"diarrhea","type":"exact"},{"name":"diarrhea of presumed infectious origin","type":"related"},{"name":"diarrheal disease","type":"exact"},{"name":"diarrheal disorder","type":"exact"},{"name":"diarrhoea","type":"exact"},{"name":"diarrhoea of presumed infectious origin","type":"related"},{"name":"frequent stools","type":"exact"},{"name":"loose stools","type":"exact"}],"termid":"MONDO:0001673","terms_by_termid":{"MONDO:0008964":null,"MONDO:0009635":null,"MONDO:0014375":null},"xrefs":{"Monarch":{"xref_id":"0001673"}}}


id: PBO:0057698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1286","termid":"PBO:0057698"}


id: PBO:0069728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1009, pseudogene","termid":"PBO:0069728"}


id: PBO:0045089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal-less homeobox 1","termid":"PBO:0045089"}


id: PBO:0017056
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ars Binding Protein","termid":"PBO:0017056"}


id: GO:0032766
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotrimeric protein complex formed by the association of NHE3, E3KARP and alpha-actinin upon an increase in calcium ion concentration; found in clusters localized on plasma membrane and in intracellular compartments.","definition_xrefs":["PMID:11948184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"NHE3/E3KARP/ACTN4 complex","synonyms":[{"name":"NHE3/E3KARP/alpha-actinin complex","type":"exact"}],"termid":"GO:0032766"}


id: MONDO:0006053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A leiomyoma that involves the kidney.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"},{"relation_name":"is_a","term_name":"kidney benign neoplasm","termid":"MONDO:0002513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal leiomyoma","secondary_identifiers":["MEDGEN:1691847","UMLS:C5204259","EFO:1000050","NCIT:C159209"],"synonyms":[{"name":"kidney leiomyoma","type":"exact"},{"name":"leiomyoma of kidney","type":"exact"}],"termid":"MONDO:0006053","xrefs":{"Monarch":{"xref_id":"0006053"}}}


id: PR:Q09682
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit alpha type-4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11599:SF13","PRO:DNx","OMA:SCHPO00166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha type-3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13C5.01c","secondary_identifiers":["UniProtKB:Q09682"],"synonyms":[{"name":"Spom972h-PSMA4","type":"exact"}],"termid":"PR:Q09682"}


id: PR:Q09683
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A double-strand break repair protein MRE11A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10139:SF0","PRO:DNx","OMA:SCHPO00172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rad32 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13C5.07","secondary_identifiers":["UniProtKB:Q09683"],"synonyms":[{"name":"Spom972h-MRE11A","type":"exact"}],"termid":"PR:Q09683"}


id: MOD:01237
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct of an L-cysteine residue with 4-hydroxynonenal.","definition_xrefs":["PubMed:11327326","PubMed:9629898","PubMed:15133838","Unimod:53#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-hydroxynonenal adduct","termid":"MOD:00446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"cysteine 4-hydroxynonenal adduct","synonyms":[{"name":"4-hydroxynonenal (HNE)","type":"related"},{"name":"HNE","type":"related"}],"termid":"MOD:01237"}


id: GO:0023041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an activated neuronal cell receptor conveys information down a signaling pathway, resulting in a change in the function or state of a cell. This process may be intracellular or intercellular.","definition_xrefs":["GOC:mtg_signal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"neuronal signal transduction","termid":"GO:0023041"}


id: PBO:0042915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor properdin","termid":"PBO:0042915"}


id: MONDO:0004455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital mesoblastic nephroma characterized by the presence of interlacing fascicles of fibroblastic cells, low mitotic activity, and collagen formation.","definition_xrefs":["NCIT:C39814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital mesoblastic nephroma","termid":"MONDO:0017043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"classic congenital mesoblastic nephroma","secondary_identifiers":["DOID:8083","UMLS:C1516475","MEDGEN:273923"],"synonyms":[{"name":"classic congenital mesoblastic nephroma","type":"exact"}],"termid":"MONDO:0004455","xrefs":{"Monarch":{"xref_id":"0004455"}}}


id: PBO:0053890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1170","termid":"PBO:0053890"}


id: PBO:0031108
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_DNA_damage","termid":"PBO:0031108"}


id: PBO:0077098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 8A pseudogene 1","termid":"PBO:0077098"}


id: MONDO:0012807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A basal subtype of epidermolysis bullosa simplex (EBS) characterized by generalized severe blistering with widespread congenital absence of skin and pyloric atresia.","definition_xrefs":["Orphanet:158684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex","termid":"MONDO:0017610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex 5C, with pyloric atresia","secondary_identifiers":["OMIM:612138","UMLS:C2677349","MESH:C567408","SCTID:716701004","MEDGEN:436922","GARD:16991"],"synonyms":[{"name":"EBS with pyloric atresia","type":"related"},{"name":"EBS-PA","type":"exact"},{"name":"EBSPA","type":"related"},{"name":"epidermolysis bullosa simplex 5C, with pyloric atresia","type":"exact"},{"name":"epidermolysis bullosa simplex with pyloric atresia","type":"exact"}],"termid":"MONDO:0012807","xrefs":{"Monarch":{"xref_id":"0012807"}}}


id: GO:0002041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of new blood vessels as a result of the insertion and extension of lumenal tissue pillars.","definition_xrefs":["PMID:16391003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiogenesis","termid":"GO:0001525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intussusceptive angiogenesis","termid":"GO:0002041"}


id: GO:0036237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an acyl-glucuronoside + H2O = an alcohol + D-glucuronate.","definition_xrefs":["PMID:22294686","GOC:vk","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"acyl-glucuronidase activity","synonyms":[{"name":"acyl-glucuronide deglucuronidation activity","type":"narrow"}],"termid":"GO:0036237"}


id: PBO:0034656
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA_recombination_frequency_at_subtelomere","termid":"PBO:0034656"}


id: GO:0044672
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multifunctional enzyme complex composed of five different polypeptides that catalyzes the decarbonylation of acetyl-CoA, cleaves the C-C and C-S bonds in the acetyl moiety of acetyl-CoA, oxidizes the carbonyl group to CO2 and transfers the methyl group to tetrahydrosarcinapterin. These reactions are important for methanogenesis.","definition_xrefs":["GOC:mengo_curators","PMID:7693685","PMID:8955306","PMID:11607176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"acetyl-CoA decarbonylase/synthase-carbon monoxide dehydrogenase complex","synonyms":[{"name":"CO dehydrogenase complex","type":"broad"},{"name":"CO dehydrogenase/acetyl-CoA synthase complex","type":"exact"},{"name":"CODH","type":"broad"},{"name":"CODH/ACS complex","type":"exact"},{"name":"carbon monoxide dehydrogenase","type":"broad"},{"name":"carbon-monoxide:(acceptor) oxidoreductase complex","type":"broad"}],"termid":"GO:0044672"}


id: PBO:0051591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL20RB antisense RNA 1","termid":"PBO:0051591"}


id: GO:1903373
data:
  {"annotated_genes":["SJAG_03812"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64194],"is_not":false,"summary":null,"term":"GO:1903373"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endoplasmic reticulum tubular network organization.","definition_xrefs":["PMID:24891604","GO_REF:0000058","GOC:als","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of endoplasmic reticulum tubular network organization","termid":"GO:1903371"},{"relation_name":"positively_regulates","term_name":"endoplasmic reticulum tubular network organization","termid":"GO:0071786"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03812":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endoplasmic reticulum tubular network organization","references_by_uniquename":{"GO_REF:0000104":null},"synonyms":[{"name":"activation of ER tubular network organisation","type":"narrow"},{"name":"activation of ER tubular network organization","type":"narrow"},{"name":"activation of endoplasmic reticulum tubular network organisation","type":"narrow"},{"name":"activation of endoplasmic reticulum tubular network organization","type":"narrow"},{"name":"positive regulation of ER tubular network organisation","type":"exact"},{"name":"positive regulation of ER tubular network organization","type":"exact"},{"name":"positive regulation of endoplasmic reticulum tubular network organisation","type":"exact"},{"name":"up regulation of ER tubular network organisation","type":"exact"},{"name":"up regulation of ER tubular network organization","type":"exact"},{"name":"up regulation of endoplasmic reticulum tubular network organisation","type":"exact"},{"name":"up regulation of endoplasmic reticulum tubular network organization","type":"exact"},{"name":"up-regulation of ER tubular network organisation","type":"exact"},{"name":"up-regulation of ER tubular network organization","type":"exact"},{"name":"up-regulation of endoplasmic reticulum tubular network organisation","type":"exact"},{"name":"up-regulation of endoplasmic reticulum tubular network organization","type":"exact"},{"name":"upregulation of ER tubular network organisation","type":"exact"},{"name":"upregulation of ER tubular network organization","type":"exact"},{"name":"upregulation of endoplasmic reticulum tubular network organisation","type":"exact"},{"name":"upregulation of endoplasmic reticulum tubular network organization","type":"exact"}],"termid":"GO:1903373","terms_by_termid":{"GO:1903373":null}}


id: PBO:0013467
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Repressor of FLocculation","termid":"PBO:0013467"}


id: GO:0086058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a voltage-gated channel across the plasma membrane of an Purkinje myocyte cell that contributes to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity involved in cardiac muscle cell action potential","termid":"GO:0086007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"voltage-gated calcium channel activity involved in Purkinje myocyte cell action potential","termid":"GO:0086058"}


id: GO:0003712
data:
  {"annotated_genes":["SJAG_00809","SJAG_04921","SJAG_04705","SJAG_00164","SJAG_00613","SJAG_04389","SJAG_00861","SJAG_00441","SJAG_02385","SJAG_03599","SJAG_03924","SJAG_03527","SJAG_03845","SJAG_00904","SJAG_01111","SJAG_05203","SJAG_02494","SJAG_03752","SJAG_02990","SJAG_02773","SJAG_04607","SJAG_04186","SJAG_02541","SJAG_00290","SJAG_03945","SJAG_02458","SJAG_04820","SJAG_01658","SJAG_01916","SJAG_00641","SJAG_02474","SJAG_04213","SJAG_03981","SJAG_04613","SJAG_00156","SJAG_02831","SJAG_02165","SJAG_02196","SJAG_03107","SJAG_01113","SJAG_05341","SJAG_02391","SJAG_00909","SJAG_04381","SJAG_01403","SJAG_03590","SJAG_04647","SJAG_02255","SJAG_03622","SJAG_03668","SJAG_04274","SJAG_00342","SJAG_02927","SJAG_03776","SJAG_03664","SJAG_01193","SJAG_01778","SJAG_00087","SJAG_01952","SJAG_03441","SJAG_01157","SJAG_01711","SJAG_04205","SJAG_01771","SJAG_06638","SJAG_02849","SJAG_00269","SJAG_04396","SJAG_00297","SJAG_02329","SJAG_02671","SJAG_02401","SJAG_02066","SJAG_00184","SJAG_00822","SJAG_02846","SJAG_01926","SJAG_01804","SJAG_03573","SJAG_01728","SJAG_03627","SJAG_04099","SJAG_05153","SJAG_00584","SJAG_01475"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77283,88271,90240,94567,95381,98474,107948,110293,114754,117260],"is_not":false,"summary":null,"term":"GO:0003712"},{"annotations":[106908,106392,112042,90903,105730,102362,93935,113512,88763,118432,98079,106548,87971,86932,98178,101457,118591,89188,88590,113803,95649,105864,107721,99986,93572,87821,114887,108212,95351,93829,103178,117114,102868,106221,89846,107172,95017,92977,118592,107294,102670,115787,90162,98004,98529,108238,114229,103117,94868,102917,97314,105264,106822,98796,112471,117067,111787,111246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003713"},{"annotations":[103823,111584,103461,103762,106222,92722,98388,96712,103702,92684,108835,100476,93264,102282,106492,113642,104523,90740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003714"}]},"cv_name":"molecular_function","definition":"A transcription regulator activity that modulates the transcription of specific gene sets via binding to a DNA-binding transcription factor at a specific genomic locus, either on its own or as part of a complex. Coregulators often act by altering chromatin structure and modifications. For example, one class of transcription coregulators modifies chromatin structure through covalent modification of histones. A second class remodels the conformation of chromatin in an ATP-dependent fashion. A third class modulates interactions of DNA-bound DNA-binding transcription factors with other transcription coregulators.","definition_xrefs":["PMID:24203923","PMID:10213677","PMID:16858867","PMID:25957681","Wikipedia:Transcription_coregulator","GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"},{"relation_name":"is_a","term_name":"transcription regulator activity","termid":"GO:0140110"}],"gene_count":85,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00156":null,"SJAG_00164":null,"SJAG_00184":null,"SJAG_00269":null,"SJAG_00290":null,"SJAG_00297":null,"SJAG_00342":null,"SJAG_00441":null,"SJAG_00584":null,"SJAG_00613":null,"SJAG_00641":null,"SJAG_00809":null,"SJAG_00822":null,"SJAG_00861":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_01111":null,"SJAG_01113":null,"SJAG_01157":null,"SJAG_01193":null,"SJAG_01403":null,"SJAG_01475":null,"SJAG_01658":null,"SJAG_01711":null,"SJAG_01728":null,"SJAG_01771":null,"SJAG_01778":null,"SJAG_01804":null,"SJAG_01916":null,"SJAG_01926":null,"SJAG_01952":null,"SJAG_02066":null,"SJAG_02165":null,"SJAG_02196":null,"SJAG_02255":null,"SJAG_02329":null,"SJAG_02385":null,"SJAG_02391":null,"SJAG_02401":null,"SJAG_02458":null,"SJAG_02474":null,"SJAG_02494":null,"SJAG_02541":null,"SJAG_02671":null,"SJAG_02773":null,"SJAG_02831":null,"SJAG_02846":null,"SJAG_02849":null,"SJAG_02927":null,"SJAG_02990":null,"SJAG_03107":null,"SJAG_03441":null,"SJAG_03527":null,"SJAG_03573":null,"SJAG_03590":null,"SJAG_03599":null,"SJAG_03622":null,"SJAG_03627":null,"SJAG_03664":null,"SJAG_03668":null,"SJAG_03752":null,"SJAG_03776":null,"SJAG_03845":null,"SJAG_03924":null,"SJAG_03945":null,"SJAG_03981":null,"SJAG_04099":null,"SJAG_04186":null,"SJAG_04205":null,"SJAG_04213":null,"SJAG_04274":null,"SJAG_04381":null,"SJAG_04389":null,"SJAG_04396":null,"SJAG_04607":null,"SJAG_04613":null,"SJAG_04647":null,"SJAG_04705":null,"SJAG_04820":null,"SJAG_04921":null,"SJAG_05153":null,"SJAG_05203":null,"SJAG_05341":null,"SJAG_06638":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0030674","GO:0003674","GO:0060090","GO:0140110"],"is_obsolete":false,"name":"transcription coregulator activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0016455","GO:0001104"],"synonyms":[{"name":"RNA polymerase II transcriptional cofactor activity","type":"related"},{"name":"nuclear receptor coreceptor activity","type":"narrow"},{"name":"transcription cofactor activity","type":"exact"},{"name":"transcription coreceptor activity","type":"exact"},{"name":"transcriptional co-regulator","type":"exact"}],"termid":"GO:0003712","terms_by_termid":{"GO:0003712":null,"GO:0003713":null,"GO:0003714":null}}


id: GO:1905150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of voltage-gated sodium channel activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:24198377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sodium ion transmembrane transporter activity","termid":"GO:2000649"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of voltage-gated sodium channel activity","synonyms":[{"name":"regulation of voltage gated sodium channel activity","type":"exact"},{"name":"regulation of voltage-dependent sodium channel activity","type":"exact"},{"name":"regulation of voltage-gated sodium ion channel activity","type":"exact"},{"name":"regulation of voltage-sensitive sodium channel","type":"exact"}],"termid":"GO:1905150"}


id: GO:0010060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that suppresses atrichoblast fate specification.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"regulation of atrichoblast fate specification","termid":"GO:0010058"},{"relation_name":"is_a","term_name":"negative regulation of plant epidermal cell differentiation","termid":"GO:1903889"},{"relation_name":"negatively_regulates","term_name":"atrichoblast fate specification","termid":"GO:0010056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of atrichoblast fate specification","synonyms":[{"name":"down regulation of atrichoblast fate","type":"exact"},{"name":"down-regulation of atrichoblast fate","type":"exact"},{"name":"downregulation of atrichoblast fate","type":"exact"},{"name":"inhibition of atrichoblast fate","type":"narrow"}],"termid":"GO:0010060"}


id: MONDO:0014943
data:
  {"annotated_genes":["SJAG_00634"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86662],"is_not":false,"summary":null,"term":"MONDO:0014943"}]},"cv_name":"mondo","definition":"Any mitochondrial DNA depletion syndrome in which the cause of the disease is a mutation in the TFAM gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome","termid":"MONDO:0018158"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial DNA depletion syndrome 15 (hepatocerebral type)","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080337","UMLS:C4310690","MEDGEN:934657","OMIM:617156"],"synonyms":[{"name":"MTDPS15","type":"related"},{"name":"TFAM mitochondrial DNA depletion syndrome","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 15 (hepatocerebral type)","type":"exact"},{"name":"mitochondrial DNA depletion syndrome caused by mutation in TFAM","type":"exact"}],"termid":"MONDO:0014943","terms_by_termid":{"MONDO:0014943":null},"xrefs":{"Monarch":{"xref_id":"0014943"}}}


id: PBO:0058928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA let-7f-2","termid":"PBO:0058928"}


id: GO:0090194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of glomerulus development, the progression of the glomerulus over time from its initial formation until its mature state. The glomerulus is a capillary tuft surrounded by Bowman's capsule in nephrons of the vertebrate kidney.","definition_xrefs":["GOC:yaf","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of kidney development","termid":"GO:0090185"},{"relation_name":"is_a","term_name":"regulation of glomerulus development","termid":"GO:0090192"},{"relation_name":"negatively_regulates","term_name":"glomerulus development","termid":"GO:0032835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glomerulus development","termid":"GO:0090194"}


id: GO:0015924
data:
  {"annotated_genes":["SJAG_01858","SJAG_03032"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66284,95197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004571"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the terminal alpha-D-mannose residues in oligo-mannose oligosaccharides.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-mannosidase activity","termid":"GO:0004559"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01858":null,"SJAG_03032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"mannosyl-oligosaccharide mannosidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0015924","terms_by_termid":{"GO:0004571":null}}


id: GO:0048517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of trichome initiation; as in, but not restricted to, the flowering plants (Magnoliophyta, ncbi_taxonomy_id:3398).","definition_xrefs":["GOC:lr"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of trichome initiation (sensu Magnoliophyta) (obsolete GO:0048517)","synonyms":[{"name":"positive regulation of trichome initiation (sensu Magnoliophyta)","type":"exact"}],"termid":"GO:0048517"}


id: PBO:0039670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 4 subunit beta 1","termid":"PBO:0039670"}


id: GO:0046939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing one or more phosphate groups into a nucleotide to produce a phosphorylated nucleoside.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleotide phosphorylation (obsolete GO:0046939)","termid":"GO:0046939"}


id: PBO:0051875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isthmin 2","termid":"PBO:0051875"}


id: MONDO:0008412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intestinal infection that is caused by Schistosoma japonicum.","definition_xrefs":["NCIT:C35001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schistosomiasis","termid":"MONDO:0015254"},{"relation_name":"is_a","term_name":"intestinal helminthiasis","termid":"MONDO:0024271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal schistosomiasis","secondary_identifiers":["SCTID:268058007","SCTID:52179003","SCTID:240796008","ICD9:120.1","UMLS:C0242497","MESH:D012554","MEDGEN:116602","NCIT:C35364","ICD9:120.2","MESH:D012555","NCIT:C35002","SCTID:750009","DOID:0050597"],"synonyms":[{"name":"Katayama fever","type":"exact"},{"name":"Schistosoma mansoni infection, susceptibility/resistance to","type":"related"},{"name":"Schistosoma mansoni, intensity of infection by","type":"related"},{"name":"schistosomiasis japonica","type":"exact"}],"termid":"MONDO:0008412","xrefs":{"Monarch":{"xref_id":"0008412"}}}


id: PATO:0000051
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single physical entity inhering in the bearer by virtue of the bearer's size or shape or structure.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"morphology","termid":"PATO:0000051"}


id: PBO:0050524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox D12","termid":"PBO:0050524"}


id: MONDO:0009386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"reading disorder","termid":"MONDO:0001697"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperlexia","secondary_identifiers":["MEDGEN:341011","OMIM:238350","MESH:C565500","UMLS:C1855928"],"synonyms":[{"name":"compulsive reading","type":"related"},{"name":"hyperlexia","type":"exact"},{"name":"precocious reading","type":"related"}],"termid":"MONDO:0009386","xrefs":{"Monarch":{"xref_id":"0009386"}}}


id: MONDO:0035437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic autoinflammatory syndrome with immune deficiency characterized by a combination of autoinflammation, immunodeficiency, and neutrophil dysfunction, as well as mild bleeding diathesis. Patients present recurrent attacks of abdominal pain, high fever, and systemic inflammation lasting four to five days and occurring every few weeks. Attacks may be accompanied by nailbed, tongue, submandibular, and gluteal abscesses, intra-abdominal granulomas, pyoderma gangrenosum, and buccal ulcerations. Frequent episodes of purulent paronychia, superficial skin and mucosal infections, and purulent upper respiratory tract infections have also been reported.","definition_xrefs":["Orphanet:566067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEBPE-associated autoinflammation-immunodeficiency-neutrophil dysfunction syndrome","secondary_identifiers":["MEDGEN:1799987","ICD10CM:D89.8","UMLS:C5568564","GARD:22273"],"synonyms":[{"name":"CAIN","type":"exact"}],"termid":"MONDO:0035437","xrefs":{"Monarch":{"xref_id":"0035437"}}}


id: GO:0044110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of an organism occurring when the organism is in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators","GO:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete growth involved in symbiotic interaction (obsolete GO:0044110)","synonyms":[{"name":"growth during symbiotic interaction","type":"related"},{"name":"growth on or near surface of other organism during symbiotic interaction","type":"related"},{"name":"growth on or near surface of other organism involved in symbiotic interaction","type":"related"}],"termid":"GO:0044110"}


id: PBO:0082875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Covalently linked cell wall glycoprotein; present in the inner layer of the cell wall","termid":"PBO:0082875"}


id: PR:O74391
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl2502 gene.","definition_xrefs":["UniProtKB:O74391","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L25-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.04","synonyms":[{"name":"Spom972h-rpl2502","type":"exact"}],"termid":"PR:O74391"}


id: GO:0006544
data:
  {"annotated_genes":["SJAG_03914","SJAG_03290","SJAG_03641","SJAG_01766","SJAG_01271","SJAG_03861","SJAG_02901","SJAG_02450"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006545"},{"annotations":[93970,90785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019264"},{"annotations":[97355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006546"},{"annotations":[88147,86905,112521,95892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019464"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycine, aminoethanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid metabolic process","termid":"GO:0009069"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01271":null,"SJAG_01766":null,"SJAG_02450":null,"SJAG_02901":null,"SJAG_03290":null,"SJAG_03641":null,"SJAG_03861":null,"SJAG_03914":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"glycine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glycine metabolism","type":"exact"}],"termid":"GO:0006544","terms_by_termid":{"GO:0006545":null,"GO:0006546":null,"GO:0019264":null,"GO:0019464":null}}


id: GO:1990920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the proteasome is transported to, or maintained at the nuclear periphery.","definition_xrefs":["PMID:11084332"],"gene_count":0,"genotype_count":0,"name":"obsolete proteasome localization to nuclear periphery (obsolete GO:1990920)","termid":"GO:1990920"}


id: PBO:0031663
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_modification","termid":"PBO:0031663"}


id: PBO:0078759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase subunit 11-2 pseudogene 2","termid":"PBO:0078759"}


id: PBO:0072068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S11 pseudogene 6","termid":"PBO:0072068"}


id: GO:0009415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of water.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to acid chemical","termid":"GO:0001101"},{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to water","synonyms":[{"name":"response to water stimulus","type":"exact"}],"termid":"GO:0009415"}


id: PBO:0035932
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_trimethylation_at_centromere_during_vegetative_growth","termid":"PBO:0035932"}


id: GO:0061863
data:
  {"annotated_genes":["SJAG_02624","SJAG_03540"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117651,118165],"is_not":false,"summary":null,"term":"GO:0061863"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of tubulin dimers to the plus end of a microtubule. The reaction is reversible depending on the availability of dimers.","definition_xrefs":["PMID:27872152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity","termid":"GO:0016740"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02624":null,"SJAG_03540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"microtubule plus end polymerase","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061863","terms_by_termid":{"GO:0061863":null}}


id: MONDO:0029146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Saul-Wilson syndrome (obsolete MONDO:0029146)","termid":"MONDO:0029146","xrefs":{"Monarch":{"xref_id":"0029146"}}}


id: GO:0038149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the C-C motif chemokine 2 (CCL2) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:bf","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-C chemokine receptor activity","termid":"GO:0016493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"C-C motif chemokine 2 receptor activity","synonyms":[{"name":"CCL2 receptor activity","type":"exact"}],"termid":"GO:0038149"}


id: MONDO:0004255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant epithelial neoplasm of probable Wolffian origin. It predominantly arises from the broad ligament and presents as a unilateral adnexal mass.","definition_xrefs":["NCIT:C40141"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"uterine ligament cancer","termid":"MONDO:0003612"},{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"},{"relation_name":"is_a","term_name":"uterine ligament neoplasm","termid":"MONDO:0021629"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wolffian adnexal tumor","secondary_identifiers":["MEDGEN:275635","MESH:C536741","DOID:7514","UMLS:C1520159"],"synonyms":[{"name":"FATWO","type":"related"},{"name":"WAT","type":"related"},{"name":"Wolffian adenoma","type":"related"},{"name":"Wolffian adnexal neoplasm","type":"exact"},{"name":"Wolffian adnexal tumor","type":"exact"},{"name":"Wolffian tumor","type":"related"},{"name":"Wolffian tumour","type":"related"},{"name":"female adnexal tumor of probable Wolffian origin","type":"related"},{"name":"female adnexal tumour of probable Wolffian origin","type":"related"}],"termid":"MONDO:0004255","xrefs":{"Monarch":{"xref_id":"0004255"}}}


id: GO:0106198
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of an inorganic anion linked to a decarboxylation reaction.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on inorganic anions linked to a decarboxylation reaction (obsolete GO:0106198)","termid":"GO:0106198"}


id: SO:0002312
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An element that always exists within the promoter region of a prokaryotic gene.","definition_xrefs":["GREEKC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_promoter_element","termid":"SO:0002309"},{"relation_name":"part_of","term_name":"prokaryotic_promoter","termid":"SO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"core_prokaryotic_promoter_element","synonyms":[{"name":"core prokaryotic promoter element","type":"exact"},{"name":"general transcription factor binding site","type":"related"}],"termid":"SO:0002312"}


id: GO:0060856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the barrier between the blood and the brain. The cells in the brain are packed tightly together preventing the passage of most molecules from the blood into the brain. Only lipid soluble molecules or those that are actively transported can pass through the blood-brain barrier.","definition_xrefs":["GOC:dph","GOC:sart","GOC:aruk","PMID:20080302","PMID:30280653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of blood-brain barrier","synonyms":[{"name":"establishment of BBB","type":"exact"},{"name":"establishment of blood/brain barrier","type":"exact"}],"termid":"GO:0060856"}


id: SO:0002078
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that intersects the intron of an incompletely annotated transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete_transcript_variant","termid":"SO:0002075"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incomplete_transcript_intronic_variant","synonyms":[{"name":"incomplete transcript intronic variant","type":"exact"}],"termid":"SO:0002078"}


id: PBO:0058052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4273","termid":"PBO:0058052"}


id: PBO:0034097
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_preventative_for_condition","termid":"PBO:0034097"}


id: PBO:0058857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8086","termid":"PBO:0058857"}


id: PBO:0048173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G3BP stress granule assembly factor 2","termid":"PBO:0048173"}


id: GO:1900060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a ceramide biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:15302821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of sphingolipid biosynthetic process","termid":"GO:0090155"},{"relation_name":"is_a","term_name":"regulation of ceramide biosynthetic process","termid":"GO:2000303"},{"relation_name":"negatively_regulates","term_name":"ceramide biosynthetic process","termid":"GO:0046513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044085"],"is_obsolete":false,"name":"negative regulation of ceramide biosynthetic process","synonyms":[{"name":"down regulation of ceramide anabolism","type":"exact"},{"name":"down regulation of ceramide biosynthesis","type":"exact"},{"name":"down regulation of ceramide biosynthetic process","type":"related"},{"name":"down regulation of ceramide formation","type":"exact"},{"name":"down regulation of ceramide synthesis","type":"exact"},{"name":"down-regulation of ceramide anabolism","type":"exact"},{"name":"down-regulation of ceramide biosynthesis","type":"exact"},{"name":"down-regulation of ceramide biosynthetic process","type":"related"},{"name":"down-regulation of ceramide formation","type":"exact"},{"name":"down-regulation of ceramide synthesis","type":"exact"},{"name":"downregulation of ceramide anabolism","type":"exact"},{"name":"downregulation of ceramide biosynthesis","type":"exact"},{"name":"downregulation of ceramide biosynthetic process","type":"related"},{"name":"downregulation of ceramide formation","type":"exact"},{"name":"downregulation of ceramide synthesis","type":"exact"},{"name":"inhibition of ceramide anabolism","type":"exact"},{"name":"inhibition of ceramide biosynthesis","type":"exact"},{"name":"inhibition of ceramide biosynthetic process","type":"related"},{"name":"inhibition of ceramide formation","type":"exact"},{"name":"inhibition of ceramide synthesis","type":"exact"},{"name":"negative regulation of ceramide anabolism","type":"exact"},{"name":"negative regulation of ceramide biosynthesis","type":"exact"},{"name":"negative regulation of ceramide formation","type":"exact"},{"name":"negative regulation of ceramide synthesis","type":"exact"}],"termid":"GO:1900060"}


id: MONDO:0006176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma characterized by the presence of a cribriform architectural pattern. Representative examples include the intraductal cribriform breast carcinoma and invasive cribriform breast carcinoma.","definition_xrefs":["NCIT:C3680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cribriform carcinoma","secondary_identifiers":["UMLS:C0205643","ICDO:8201/3","EFO:1000210","MEDGEN:104694"],"synonyms":[{"name":"cribriform carcinoma","type":"exact"}],"termid":"MONDO:0006176","xrefs":{"Monarch":{"xref_id":"0006176"}}}


id: PBO:0001730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR101","termid":"PBO:0001730"}


id: PBO:0067833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 135","termid":"PBO:0067833"}


id: PATO:0001166
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001166 urine enzyme composition (obsolete PATO:0001166)","termid":"PATO:0001166"}


id: PBO:0072858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha and TIR motif containing 1","termid":"PBO:0072858"}


id: GO:2000543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gastrulation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gastrulation","termid":"GO:0010470"},{"relation_name":"is_a","term_name":"positive regulation of embryonic development","termid":"GO:0040019"},{"relation_name":"positively_regulates","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of gastrulation","termid":"GO:2000543"}


id: GO:0006076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (1->3)-beta-D-glucans.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(1->3)-beta-D-glucan metabolic process","termid":"GO:0006074"},{"relation_name":"is_a","term_name":"beta-glucan catabolic process","termid":"GO:0051275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"(1->3)-beta-D-glucan catabolic process","synonyms":[{"name":"1,3-beta-D-glucan catabolic process","type":"exact"},{"name":"1,3-beta-glucan breakdown","type":"exact"},{"name":"1,3-beta-glucan catabolism","type":"exact"},{"name":"1,3-beta-glucan degradation","type":"exact"},{"name":"beta-1,3 glucan breakdown","type":"exact"},{"name":"beta-1,3 glucan catabolic process","type":"exact"},{"name":"beta-1,3 glucan catabolism","type":"exact"},{"name":"beta-1,3 glucan degradation","type":"exact"}],"termid":"GO:0006076"}


id: PBO:0078423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 2-4","termid":"PBO:0078423"}


id: GO:2000618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H4-K16 acetylation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H4-K16 acetylation (obsolete GO:2000618)","synonyms":[{"name":"regulation of histone H4 acetylation at K16","type":"exact"}],"termid":"GO:2000618"}


id: FYPO:0007575
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one or more proteins is localized to the medial cortical nodes for a shorter time than normal.","definition_xrefs":["PomBase:mah","PMID:25501814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased duration of protein localization to cell division site","termid":"FYPO:0002528"},{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortical node","termid":"FYPO:0003289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased duration of protein localization to medial cortical node","synonyms":[{"name":"decreased duration of protein localisation to cytokinetic nodes","type":"exact"},{"name":"decreased duration of protein localisation to medial cortical dot","type":"exact"},{"name":"decreased duration of protein localisation to medial cortical node","type":"exact"},{"name":"decreased duration of protein localization to medial cortical node during mitotic cell cycle","type":"related"},{"name":"decreased duration of protein localization to medial cortical node during vegetative growth","type":"exact"},{"name":"decreased duration of protein localization to medial cortical nodes","type":"exact"},{"name":"decreased duration of protein recruitment to medial cortical node","type":"related"},{"name":"reduced duration protein localization to medial cortical node","type":"exact"}],"termid":"FYPO:0007575"}


id: PBO:0064878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 37","termid":"PBO:0064878"}


id: PBO:0110353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBF4B-CDC7 kinase regulatory subunit","termid":"PBO:0110353"}


id: GO:0033383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving geranyl diphosphate, the universal precursor of the monoterpenes.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"geranyl diphosphate metabolic process","synonyms":[{"name":"geranyl diphosphate metabolism","type":"exact"},{"name":"geranyldiphosphate metabolic process","type":"exact"}],"termid":"GO:0033383"}


id: GO:0102557
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (20S)-protopanaxadiol + O2 + reduced [NADPH--hemoprotein reductase] = (20S)-protopanaxatriol + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["EC:1.14.14.121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"protopanaxadiol 6-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14978","RHEA:22272"],"termid":"GO:0102557"}


id: PBO:0051656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine monophosphate dehydrogenase 1 pseudogene 11","termid":"PBO:0051656"}


id: MONDO:0032889
data:
  {"annotated_genes":["SJAG_03931","SJAG_00142"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86302,86303],"is_not":false,"summary":null,"term":"MONDO:0032889"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_03931":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Poirier-Bienvenu neurodevelopmental syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1684718","OMIM:618732","UMLS:C5231482"],"synonyms":[{"name":"POBINDS","type":"related"},{"name":"POIRIER-BIENVENU NEURODEVELOPMENTAL SYNDROME","type":"related"}],"termid":"MONDO:0032889","terms_by_termid":{"MONDO:0032889":null},"xrefs":{"Monarch":{"xref_id":"0032889"}}}


id: PBO:0086062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that associates with translating ribosomes; interacts with GTPase Rbg1p","termid":"PBO:0086062"}


id: PBO:0081494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF385D antisense RNA 2","termid":"PBO:0081494"}


id: FYPO:0007573
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring contraction begins earlier than normal and the rate, or speed, of ring contraction is increased.","definition_xrefs":["PomBase:mah","PomBase:vw","PMID:25451933"],"direct_ancestors":[{"relation_name":"has_part","term_name":"premature actomyosin contractile ring contraction","termid":"FYPO:0004430"},{"relation_name":"has_part","term_name":"increased rate of actomyosin contractile ring contraction","termid":"FYPO:0006897"},{"relation_name":"is_a","term_name":"premature actomyosin contractile ring contraction","termid":"FYPO:0004430"},{"relation_name":"is_a","term_name":"increased rate of actomyosin contractile ring contraction","termid":"FYPO:0006897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0004803"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000032","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0004803"],"is_obsolete":false,"name":"premature actomyosin contractile ring contraction with increased contraction rate","synonyms":[{"name":"advanced actomyosin contractile ring contraction with increased contraction rate","type":"exact"},{"name":"premature actomyosin contractile ring constriction with increased constriction rate","type":"exact"},{"name":"premature actomyosin contractile ring constriction with increased rate of contraction","type":"exact"},{"name":"premature actomyosin contractile ring contraction with increased contraction rate during mitotic cell cycle","type":"related"},{"name":"premature actomyosin contractile ring contraction with increased contraction rate during vegetative growth","type":"exact"},{"name":"premature contractile ring contraction with increased rate of contraction","type":"exact"},{"name":"premature cytokinetic contractile ring contraction with increased rate of contraction","type":"exact"},{"name":"premature mitotic actomyosin contractile ring contraction with increased contraction rate","type":"exact"},{"name":"premature, fast actomyosin contractile ring contraction","type":"exact"}],"termid":"FYPO:0007573"}


id: PBO:0070057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 14, pseudogene","termid":"PBO:0070057"}


id: MOD:00587
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to 6x(13)C, 4x(15)N labeled L-arginine.","definition_xrefs":["Unimod:267","OMSSA:137","PubMed:12716131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C labeled residue","termid":"MOD:00842"},{"relation_name":"is_a","term_name":"(15)N labeled residue","termid":"MOD:00843"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C,4x(15)N labeled L-arginine","synonyms":[{"name":"13C(6) 15N(4) Silac label","type":"related"},{"name":"Label:13C(6)15N(4)","type":"related"},{"name":"arg-13c6-15n4","type":"exact"}],"termid":"MOD:00587"}


id: PBO:0033833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic fizzy-related APC coactivator Fzr3","termid":"PBO:0033833"}


id: GO:0052680
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (+)-epi-isozizaene + diphosphate.","definition_xrefs":["RHEA:25992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"epi-isozizaene synthase activity","secondary_identifiers":["EC:4.2.3.37","MetaCyc:RXN-9349","KEGG_REACTION:R07830"],"synonyms":[{"name":"(2E,6E)-farnesyl-diphosphate diphosphate-lyase [(+)-epi-isozizaene-forming] activity","type":"exact"}],"termid":"GO:0052680"}


id: MONDO:1012790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cataract that occurs in cattle due to a mutation in the CPAMD8 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cataract, non-human animal","termid":"MONDO:1012962"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cataract, CPAMD8-related, cattle","secondary_identifiers":["OMIA:002111-9913"],"synonyms":[{"name":"Morgagnian cataract","type":"related"},{"name":"cataract, recessive, CPAMD8-related, cattle","type":"exact"}],"termid":"MONDO:1012790","xrefs":{"Monarch":{"xref_id":"1012790"}}}


id: MONDO:0001855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"rubeosis iridis","secondary_identifiers":["DOID:14000","ICD9:364.42","UMLS:C0154916","MEDGEN:488789","SCTID:51995000"],"termid":"MONDO:0001855","xrefs":{"Monarch":{"xref_id":"0001855"}}}


id: GO:1904831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of aortic smooth muscle cell differentiation.","definition_xrefs":["GOC:rph","GOC:TermGenie","GO_REF:0000058","PMID:22034194","GOC:BHF_miRNA","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of aortic smooth muscle cell differentiation","termid":"GO:1904829"},{"relation_name":"is_a","term_name":"positive regulation of vascular associated smooth muscle cell differentiation","termid":"GO:1905065"},{"relation_name":"positively_regulates","term_name":"aortic smooth muscle cell differentiation","termid":"GO:0035887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of aortic smooth muscle cell differentiation","synonyms":[{"name":"activation of aortic smooth muscle cell differentiation","type":"narrow"},{"name":"up regulation of aortic smooth muscle cell differentiation","type":"exact"},{"name":"up-regulation of aortic smooth muscle cell differentiation","type":"exact"},{"name":"upregulation of aortic smooth muscle cell differentiation","type":"exact"}],"termid":"GO:1904831"}


id: MONDO:0014450
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any isolated congenital breast hypoplasia/aplasia in which the cause of the disease is a mutation in the PTPRF gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated congenital breast hypoplasia/aplasia","termid":"MONDO:0015855"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breasts and/or nipples, aplasia or hypoplasia of, 2","secondary_identifiers":["MEDGEN:863355","OMIM:616001","UMLS:C4014918","GARD:16044"],"synonyms":[{"name":"BNAH2","type":"related"},{"name":"PTPRF isolated congenital breast hypoplasia/aplasia","type":"exact"},{"name":"breasts and/or nipples, aplasia or hypoplasia of, 2","type":"exact"},{"name":"breasts and/or nipples, aplasia or hypoplasia of, type 2","type":"exact"},{"name":"isolated congenital breast hypoplasia/aplasia caused by mutation in PTPRF","type":"exact"}],"termid":"MONDO:0014450","xrefs":{"Monarch":{"xref_id":"0014450"}}}


id: GO:0002808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antibacterial peptide biosynthesis.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antibacterial peptide production","termid":"GO:0002786"},{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide biosynthetic process","termid":"GO:0002805"},{"relation_name":"regulates","term_name":"antibacterial peptide biosynthetic process","termid":"GO:0002780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of antibacterial peptide biosynthetic process","termid":"GO:0002808"}


id: PBO:0028458
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_septum","termid":"PBO:0028458"}


id: PBO:0039842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP11A divergent transcript","termid":"PBO:0039842"}


id: PBO:0060730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 1","termid":"PBO:0060730"}


id: PBO:0040653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bublin coiled coil protein","termid":"PBO:0040653"}


id: MONDO:0002665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the extrahepatic bile duct","direct_ancestors":[{"relation_name":"is_a","term_name":"extrahepatic bile duct carcinoma","termid":"MONDO:0003090"},{"relation_name":"is_a","term_name":"bile duct adenocarcinoma","termid":"MONDO:0003193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"extrahepatic bile duct adenocarcinoma","secondary_identifiers":["DOID:3495","MEDGEN:124642","NCIT:C7975","UMLS:C0279659"],"synonyms":[{"name":"adenocarcinoma of extrahepatic bile duct","type":"exact"},{"name":"adenocarcinoma of the extrahepatic bile duct","type":"exact"},{"name":"extrahepatic bile duct adenocarcinoma","type":"exact"}],"termid":"MONDO:0002665","xrefs":{"Monarch":{"xref_id":"0002665"}}}


id: SO:0001990
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 5' UTR variant where a premature start codon is moved.","definition_xrefs":["SANGER:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_premature_start_codon_variant","termid":"SO:0001983"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_UTR_premature_start_codon_location_variant","termid":"SO:0001990"}


id: PBO:0001255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid efflux transporter Avt3","termid":"PBO:0001255"}


id: GO:0047971
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-guanidinobutanoate + H2O = 4-aminobutanoate + urea.","definition_xrefs":["EC:3.5.3.7","RHEA:19501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"guanidinobutyrase activity","secondary_identifiers":["KEGG_REACTION:R01990","MetaCyc:GUANIDINOBUTYRASE-RXN"],"synonyms":[{"name":"4-guanidinobutanoate amidinohydrolase activity","type":"related"},{"name":"4-guanidinobutyrate amidinobutyrase activity","type":"related"},{"name":"G-base activity","type":"related"},{"name":"GBH","type":"related"},{"name":"gamma-guanidinobutyrate amidinohydrolase activity","type":"related"},{"name":"gamma-guanidobutyrase activity","type":"related"},{"name":"guanidinobutyrate ureahydrolase activity","type":"related"}],"termid":"GO:0047971"}


id: GO:0070864
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cellular structure that includes cytoskeletal components and part of the cell membrane. Forms at the nuclear end of a male germline syncytium, or cyst, and translocates the over the length of the syncytium in the course of sperm individualization. Each complex contains an array of 64 investment cones, one per nucleus, that move synchronously along the spermatogenic cyst.","definition_xrefs":["PMID:9550716","GOC:sart","PMID:10588662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm individualization complex","termid":"GO:0070864"}


id: MONDO:1011989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blindness with enlarged globe, non-human animal","secondary_identifiers":["OMIA:001367"],"termid":"MONDO:1011989","xrefs":{"Monarch":{"xref_id":"1011989"}}}


id: GO:0004912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-3 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-3 receptor activity","secondary_identifiers":["Wikipedia:Interleukin-3_receptor"],"synonyms":[{"name":"IL-3 receptor activity","type":"exact"},{"name":"IL-3R","type":"exact"}],"termid":"GO:0004912"}


id: PBO:0039622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A5","termid":"PBO:0039622"}


id: PBO:0042109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 182","termid":"PBO:0042109"}


id: MONDO:0009038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Craniosynostosis-fibular aplasia is an extremely rare genetic disease, reported in only 2 brothers to date, characterized by the combination of craniosynostosis (involving both coronal sutures), congenital absence of the fibula, cryptorchidism, and bilateral simian creases. Intelligence is normal and an autosomal recessive mode of inheritance has been proposed. There have been no further reports in the literature since 1972.","definition_xrefs":["Orphanet:1533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"craniosynostosis-fibular aplasia syndrome","secondary_identifiers":["MEDGEN:347468","MESH:C565665","SCTID:732250002","OMIM:218550","UMLS:C1857492"],"synonyms":[{"name":"Lowry syndrome","type":"exact"},{"name":"craniosynostosis with fibular aplasia","type":"related"}],"termid":"MONDO:0009038","xrefs":{"Monarch":{"xref_id":"0009038"}}}


id: MONDO:0020139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete early-onset ataxia with dementia (obsolete MONDO:0020139)","secondary_identifiers":["Orphanet:98539"],"termid":"MONDO:0020139","xrefs":{"Monarch":{"xref_id":"0020139"}}}


id: PBO:0089785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notchless-like ribosome biogenesis protein Rsa4","termid":"PBO:0089785"}


id: PBO:0028859
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_actin_cortical_patch_localization_during_mitosis","termid":"PBO:0028859"}


id: PBO:0002103
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds DRE 5'-NG[GT]T[G/A]-3'","termid":"PBO:0002103"}


id: GO:1905231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a borneol stimulus.","definition_xrefs":["PMID:26593909","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"response to borneol","termid":"GO:1905230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to borneol","termid":"GO:1905231"}


id: PBO:0045797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelin 1","termid":"PBO:0045797"}


id: MONDO:1012504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hydrallantois, non-human animal","termid":"MONDO:1011672"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrallantois, goat","secondary_identifiers":["OMIA:002053-9925"],"termid":"MONDO:1012504","xrefs":{"Monarch":{"xref_id":"1012504"}}}


id: FYPO:0003613
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids is normal (i.e. indistinguishable from wild type) during prophase of the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic sister chromatid cohesion","termid":"FYPO:0002094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic sister chromatid cohesion during meiotic prophase I","synonyms":[{"name":"normal sister chromatid cohesion during meiotic prophase I","type":"exact"}],"termid":"FYPO:0003613"}


id: MONDO:0019557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, chronic cutaneous lupus erythematosus disease characterized by red or violaceous, initially pruritic (evolving to painful) papules and plaques located on acral areas (especially dorsal aspects of fingers and toes, while the nose and ear involvement is uncommon), exacerbated by cold and damp conditions, with fissuring and ulceration occasionally observed. Coexistence of discoid lupus erythematosus lesions elsewhere on the body and occasional progression to systemic lupus erythematosus may be associated. Histological examination and direct immunofluorescence studies reveal nonspecific inflammatory lupus erythematosus changes while results of cryoglobulin and cold agglutinin studies are negative.","definition_xrefs":["Orphanet:90280"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare genetic skin vascular disorder (obsolete MONDO:0015948)","termid":"MONDO:0015948"},{"relation_name":"is_a","term_name":"autoimmune disorder of cardiovascular system","termid":"MONDO:0000603"},{"relation_name":"is_a","term_name":"chronic cutaneous lupus erythematosus","termid":"MONDO:0015574"},{"relation_name":"is_a","term_name":"skin vascular disease","termid":"MONDO:0019293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"chilblain lupus","secondary_identifiers":["GARD:19130","UMLS:C4551515","MedDRA:10025141","DOID:0060386","MEDGEN:1632142"],"synonyms":[{"name":"CHLE","type":"exact"},{"name":"Hutchinson lupus","type":"exact"}],"termid":"MONDO:0019557","xrefs":{"Monarch":{"xref_id":"0019557"}}}


id: PBO:0029255
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_regulation_of_DNA_replication","termid":"PBO:0029255"}


id: PATO:0001176
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001176 deaf (obsolete PATO:0001176)","termid":"PATO:0001176"}


id: MONDO:0011174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperzincemia with functional zinc depletion","secondary_identifiers":["MESH:C566595","UMLS:C1865986","MEDGEN:356415","OMIM:601979"],"synonyms":[{"name":"hyperzincemia with functional zinc depletion","type":"exact"}],"termid":"MONDO:0011174","xrefs":{"Monarch":{"xref_id":"0011174"}}}


id: FYPO:0000400
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested at the G2/M transition, under conditions where arrest is not a normal occurrence.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0000446"},{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic interphase","termid":"FYPO:0001028"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell cycle arrest at mitotic G2/M phase transition","references_by_uniquename":{"PMID:25866389":null},"secondary_identifiers":["FYPO:0003373"],"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during vegetative growth","type":"exact"},{"name":"abnormal mitotic G2/M phase arrest","type":"exact"},{"name":"abnormal mitotic cell cycle arrest at G2/M phase transition","type":"exact"},{"name":"abolished mitotic G2/M phase transition","type":"related"},{"name":"cell cycle progression through the G2/M phase transition: arrested","type":"related"}],"termid":"FYPO:0000400","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: PBO:0000225
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porphyria","termid":"PBO:0000225"}


id: MONDO:1012443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant melanoma, non-human animal","termid":"MONDO:1011821"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant melanoma, lion","secondary_identifiers":["OMIA:001724-9689"],"termid":"MONDO:1012443","xrefs":{"Monarch":{"xref_id":"1012443"}}}


id: PBO:0000053
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"present at telomere ends","termid":"PBO:0000053"}


id: GO:0033357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-arabinose, arabino-pentose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabinose biosynthetic process","termid":"GO:0019567"},{"relation_name":"is_a","term_name":"L-arabinose metabolic process","termid":"GO:0046373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-arabinose biosynthetic process","synonyms":[{"name":"L-arabinose anabolism","type":"exact"},{"name":"L-arabinose biosynthesis","type":"exact"},{"name":"L-arabinose formation","type":"exact"},{"name":"L-arabinose synthesis","type":"exact"}],"termid":"GO:0033357"}


id: PBO:0004584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,3-glucan synthase Mok13","termid":"PBO:0004584"}


id: MONDO:0014162
data:
  {"annotated_genes":["SJAG_04019"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85449],"is_not":false,"summary":null,"term":"MONDO:0014162"}]},"cv_name":"mondo","definition":"Infantile hypertrophic cardiomyopathy due to MRPL44 deficiency is a rare mitochondrial oxidative phosphorylation disorder with complex I and IV deficiency characterized by hypertrophic cardiomyopathy, hepatic steatosis with elevated liver transaminases, exercise intolerance and muscle weakness. Neuro-opthalmological features (hemiplegic migraine, Leigh-like lesions on brain MRI, pigmentary retinopathy) have been reported later in life.","definition_xrefs":["Orphanet:352563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04019":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"infantile hypertrophic cardiomyopathy due to MRPL44 deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111469","GARD:12892","OMIM:615395","UMLS:C3809339","MEDGEN:815669"],"synonyms":[{"name":"COXPD16","type":"exact"},{"name":"MRPL44 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation defect type 16","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 16","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in MRPL44","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 16","type":"exact"}],"termid":"MONDO:0014162","terms_by_termid":{"MONDO:0014162":null},"xrefs":{"Monarch":{"xref_id":"0014162"}}}


id: GO:0019645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a series of electron carriers operate together to transfer electrons from donors such as NADH and FADH2 to any of several different terminal electron acceptors other than oxygen to generate a transmembrane electrochemical gradient.","definition_xrefs":["GOC:ai","GOC:mtg_electron_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory electron transport chain","termid":"GO:0022904"},{"relation_name":"part_of","term_name":"anaerobic respiration","termid":"GO:0009061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"anaerobic electron transport chain","termid":"GO:0019645"}


id: PBO:0066000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RALBP1 pseudogene 2","termid":"PBO:0066000"}


id: SO:0001882
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant, caused by an alteration of the genomic sequence, where a deletion fuses genomic features.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural_variant","termid":"SO:0001537"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feature_fusion","synonyms":[{"name":"feature fusion","type":"exact"}],"termid":"SO:0001882"}


id: GO:1902917
data:
  {"annotated_genes":["SJAG_03453","SJAG_02379","SJAG_01794","SJAG_00514","SJAG_04509"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87370,89344,90329,92959,110856],"is_not":false,"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mating projection assembly.","definition_xrefs":["PMID:12455985","GOC:di","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mating projection assembly","termid":"GO:0031383"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120034"},{"relation_name":"part_of","term_name":"positive regulation of conjugation with cellular fusion","termid":"GO:0031139"},{"relation_name":"positively_regulates","term_name":"mating projection formation","termid":"GO:0031382"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of mating projection assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of mating projection assembly","type":"narrow"},{"name":"activation of mating projection biogenesis","type":"related"},{"name":"positive regulation of mating projection biogenesis","type":"related"},{"name":"up regulation of mating projection assembly","type":"exact"},{"name":"up regulation of mating projection biogenesis","type":"related"},{"name":"up-regulation of mating projection assembly","type":"exact"},{"name":"up-regulation of mating projection biogenesis","type":"related"},{"name":"upregulation of mating projection assembly","type":"exact"},{"name":"upregulation of mating projection biogenesis","type":"related"}],"termid":"GO:1902917","terms_by_termid":{"GO:1902917":null}}


id: MONDO:0006544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A self-limited viral infectious disorder caused by the human parvovirus B19. It affects predominantly children and is characterized by the development of a bright red skin eruption in the cheeks. It is followed by a maculopapular skin eruption in the extremities which eventually fades into a lacey pattern.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"viral exanthem","termid":"MONDO:0006619"},{"relation_name":"is_a","term_name":"skin disorder caused by infection","termid":"MONDO:0024294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"erythema infectiosum","secondary_identifiers":["DOID:8743","ICD9:057.0","SCTID:34730008","MESH:D016731","MEDGEN:43142","NCIT:C84695","icd11.foundation:352375140","EFO:1000693","UMLS:C0085273"],"synonyms":[{"name":"fifth disease","type":"exact"}],"termid":"MONDO:0006544","xrefs":{"Monarch":{"xref_id":"0006544"}}}


id: GO:1903427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of reactive oxygen species biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24252804","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"regulation of reactive oxygen species biosynthetic process","termid":"GO:1903426"},{"relation_name":"is_a","term_name":"negative regulation of reactive oxygen species metabolic process","termid":"GO:2000378"},{"relation_name":"negatively_regulates","term_name":"reactive oxygen species biosynthetic process","termid":"GO:1903409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of reactive oxygen species biosynthetic process","synonyms":[{"name":"down regulation of ROS formation","type":"related"},{"name":"down regulation of ROS generation","type":"related"},{"name":"down regulation of reactive oxygen species anabolism","type":"exact"},{"name":"down regulation of reactive oxygen species biosynthesis","type":"exact"},{"name":"down regulation of reactive oxygen species biosynthetic process","type":"exact"},{"name":"down regulation of reactive oxygen species formation","type":"exact"},{"name":"down regulation of reactive oxygen species generation","type":"related"},{"name":"down regulation of reactive oxygen species synthesis","type":"exact"},{"name":"down-regulation of ROS formation","type":"related"},{"name":"down-regulation of ROS generation","type":"related"},{"name":"down-regulation of reactive oxygen species anabolism","type":"exact"},{"name":"down-regulation of reactive oxygen species biosynthesis","type":"exact"},{"name":"down-regulation of reactive oxygen species biosynthetic process","type":"exact"},{"name":"down-regulation of reactive oxygen species formation","type":"exact"},{"name":"down-regulation of reactive oxygen species generation","type":"related"},{"name":"down-regulation of reactive oxygen species synthesis","type":"exact"},{"name":"downregulation of ROS formation","type":"related"},{"name":"downregulation of ROS generation","type":"related"},{"name":"downregulation of reactive oxygen species anabolism","type":"exact"},{"name":"downregulation of reactive oxygen species biosynthesis","type":"exact"},{"name":"downregulation of reactive oxygen species biosynthetic process","type":"exact"},{"name":"downregulation of reactive oxygen species formation","type":"exact"},{"name":"downregulation of reactive oxygen species generation","type":"related"},{"name":"downregulation of reactive oxygen species synthesis","type":"exact"},{"name":"inhibition of ROS formation","type":"related"},{"name":"inhibition of ROS generation","type":"related"},{"name":"inhibition of reactive oxygen species anabolism","type":"narrow"},{"name":"inhibition of reactive oxygen species biosynthesis","type":"narrow"},{"name":"inhibition of reactive oxygen species biosynthetic process","type":"narrow"},{"name":"inhibition of reactive oxygen species formation","type":"narrow"},{"name":"inhibition of reactive oxygen species generation","type":"related"},{"name":"inhibition of reactive oxygen species synthesis","type":"narrow"},{"name":"negative regulation of ROS formation","type":"related"},{"name":"negative regulation of ROS generation","type":"related"},{"name":"negative regulation of reactive oxygen species anabolism","type":"exact"},{"name":"negative regulation of reactive oxygen species biosynthesis","type":"exact"},{"name":"negative regulation of reactive oxygen species formation","type":"exact"},{"name":"negative regulation of reactive oxygen species generation","type":"related"},{"name":"negative regulation of reactive oxygen species synthesis","type":"exact"},{"name":"prevention of ROS generation","type":"exact"}],"termid":"GO:1903427"}


id: PBO:0028840
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-heterochromatin_assembly_beyond_boundary_element_IRR","termid":"PBO:0028840"}


id: MONDO:0800294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete progressive encephalomyelitis with rigidity (obsolete MONDO:0800294)","termid":"MONDO:0800294","xrefs":{"Monarch":{"xref_id":"0800294"}}}


id: GO:0048333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a mesoderm cell.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"mesoderm formation","termid":"GO:0001707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesodermal cell differentiation","synonyms":[{"name":"mesoderm cell differentiation","type":"exact"}],"termid":"GO:0048333"}


id: FYPO:0003534
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the monopolar index is lower than normal. The monopolar index is the proportion of the population undergoing monopolar growth at any given time.","definition_xrefs":["PomBase:al","PomBase:mah","PMID:20501954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased monopolar index","synonyms":[{"name":"decreased frequency of monopolar growth polarity","type":"related"},{"name":"decreased number of cells undergoing monopolar growth","type":"exact"},{"name":"reduced monopolar index","type":"exact"}],"termid":"FYPO:0003534"}


id: PBO:0114857
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"there is a gene with the systematic identifier SPBC3B8.10 (ina17)","termid":"PBO:0114857"}


id: PBO:0081121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFAT antisense RNA 1","termid":"PBO:0081121"}


id: MONDO:1010478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arrhythmogenic right ventricular cardiomyopathy that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arrhythmogenic right ventricular cardiomyopathy, non-human animal","termid":"MONDO:1010019"},{"relation_name":"is_a","term_name":"cardiomyopathy, dog","termid":"MONDO:1010441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrhythmogenic right ventricular cardiomyopathy, dog","secondary_identifiers":["OMIA:000878-9615"],"termid":"MONDO:1010478","xrefs":{"Monarch":{"xref_id":"1010478"}}}


id: PBO:0070885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 17","termid":"PBO:0070885"}


id: PBO:0004602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protease cofactor Glp1 (predicted)","termid":"PBO:0004602"}


id: PBO:0087786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sulfiredoxin; contributes to oxidative stress resistance by reducing cysteine-sulfinic acid groups in the peroxiredoxin Tsa1p, which is formed upon exposure to oxidants; conserved in higher eukaryotes; protein abundance increases in response to DNA replication stress","termid":"PBO:0087786"}


id: GO:1903378
data:
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id: MONDO:0014410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinocerebellar ataxia type 37 (SCA37) is a subtype of autosomal dominant cerebellar ataxia type 1 (ADCA type 1), characterized by a cerebellar syndrome along with altered vertical eye movements.","definition_xrefs":["Orphanet:363710"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"spinocerebellar ataxia type 37","secondary_identifiers":["OMIM:615945","SCTID:719301002","UMLS:C3889636","DOID:0050984","MEDGEN:855217","GARD:12368"],"synonyms":[{"name":"SCA37","type":"exact"},{"name":"spinocerebellar ataxia 37","type":"related"},{"name":"spinocerebellar ataxia with altered vertical eye movements","type":"exact"}],"termid":"MONDO:0014410","xrefs":{"Monarch":{"xref_id":"0014410"}}}


id: GO:0051429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a receptor for corticotropin-releasing hormone (CRH), a polypeptide hormone involved in the stress response. It is released by the hypothalamus and stimulates the release of corticotropin by the anterior pituitary gland.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone receptor binding","termid":"GO:0051428"},{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"corticotropin-releasing hormone receptor binding","secondary_identifiers":["GO:0031742"],"synonyms":[{"name":"CRF receptor binding","type":"exact"},{"name":"CRH receptor binding","type":"exact"},{"name":"CRHR binding","type":"exact"},{"name":"corticotropin releasing factor receptor binding","type":"exact"},{"name":"corticotropin releasing factor receptor ligand","type":"narrow"},{"name":"corticotropin-releasing factor receptor binding","type":"exact"}],"termid":"GO:0051429"}


id: GO:0006412
data:
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id: MONDO:0030355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"facioscapulohumeral muscular dystrophy","termid":"MONDO:0001347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0019303"],"is_obsolete":false,"name":"facioscapulohumeral muscular dystrophy 4, digenic","secondary_identifiers":["DOID:0060918","UMLS:C5561960","OMIM:619478","MEDGEN:1794170"],"synonyms":[{"name":"FSHD4","type":"exact"},{"name":"facioscapulohumeral muscular dystrophy 4, digenic","type":"exact"},{"name":"facioscapulohumeral muscular dystrophy 4, digenic, digenic dominant","type":"exact"}],"termid":"MONDO:0030355","xrefs":{"Monarch":{"xref_id":"0030355"}}}


id: GO:0006335
data:
  {"annotated_genes":["SJAG_01823","SJAG_03366","SJAG_02439","SJAG_03033","SJAG_02198","SJAG_00618","SJAG_02348","SJAG_04272","SJAG_04879","SJAG_04038","SJAG_03128","SJAG_04547","SJAG_02416"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89544,94311,94554,101000,101059,107219,109439,109712,110671,110760,113100,114903,117463],"is_not":false,"summary":null,"term":"GO:0006335"}]},"cv_name":"biological_process","definition":"The formation of nucleosomes on newly synthesized DNA, coupled to strand elongation.","definition_xrefs":["GOC:mah","PMID:28053344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin organization","termid":"GO:0006325"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00618":null,"SJAG_01823":null,"SJAG_02198":null,"SJAG_02348":null,"SJAG_02416":null,"SJAG_02439":null,"SJAG_03033":null,"SJAG_03128":null,"SJAG_03366":null,"SJAG_04038":null,"SJAG_04272":null,"SJAG_04547":null,"SJAG_04879":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0008150"],"is_obsolete":false,"name":"DNA replication-dependent chromatin assembly","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0034723"],"synonyms":[{"name":"DNA replication-dependent chromatin organization","type":"related"},{"name":"DNA replication-dependent nucleosome assembly","type":"broad"},{"name":"DNA replication-dependent nucleosome organisation","type":"related"},{"name":"DNA replication-dependent nucleosome organization","type":"related"}],"termid":"GO:0006335","terms_by_termid":{"GO:0006335":null}}


id: GO:0060804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor that results in an increase in the rate, frequency or extent of a Wnt signaling pathway.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Wnt signaling pathway by BMP signaling pathway (obsolete GO:0060804)","synonyms":[{"name":"positive regulation of WNT receptor signaling pathway by BMP signaling pathway","type":"exact"},{"name":"positive regulation of WNT receptor signalling pathway by BMP signalling pathway","type":"exact"},{"name":"positive regulation of Wnt-activated signaling pathway by BMP signaling pathway","type":"exact"}],"termid":"GO:0060804"}


id: FYECO:0000269
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which mevalonate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ mevalonate","termid":"FYECO:0000269"}


id: MOD:00510
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, dHex HexNAc","definition_xrefs":["PubMed:1694179","Unimod:142","RESID:AA0151#var","PubMed:111247","PubMed:5490222","OMSSA:183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"HexNAc1dHex1 N4-glycosylated asparagine","synonyms":[{"name":"HexNAc(1)dHex(1)","type":"related"},{"name":"HexNAc1dHex1","type":"related"},{"name":"dHexHexNAcN","type":"exact"}],"termid":"MOD:00510"}


id: PBO:0054694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2103","termid":"PBO:0054694"}


id: GO:1904764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a chaperone-mediated autophagy translocation complex into its constituent components.","definition_xrefs":["GOC:PARL","GO_REF:0000079","GOC:pad","PMID:18644871","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chaperone-mediated autophagy translocation complex disassembly","synonyms":[{"name":"CMA receptor complex disassembly","type":"related"},{"name":"CMA translocation complex disassembly","type":"exact"},{"name":"chaperone-mediated autophagy receptor complex disassembly","type":"related"}],"termid":"GO:1904764"}


id: PBO:0027417
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth","termid":"PBO:0027417"}


id: PBO:0082376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basic leucine zipper (bZIP) transcription factor of the yAP-1 family; physically interacts with the Tup1-Cyc8 complex and recruits Tup1p to its targets; mediates pleiotropic drug resistance and salt tolerance; nuclearly localized under oxidative stress and sequestered in the cytoplasm by Lot6p under reducing conditions; CIN5 has a paralog, YAP6, that arose from the whole genome duplication","termid":"PBO:0082376"}


id: PBO:0082444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B-type regulatory subunit of protein phosphatase 2A (PP2A); Rts1p and Cdc55p are alternative regulatory subunits for PP2A catalytic subunits, Pph21p and Pph22p; PP2A-Rts1p protects cohesin when recruited by Sgo1p to the pericentromere; highly enriched at centromeres in the absence of Cdc55p; required for maintenance of septin ring organization during cytokinesis, for ring disassembly in G1 and for dephosphorylation of septin, Shs1p; homolog of the mammalian B' subunit of PP2A","termid":"PBO:0082444"}


id: PBO:0072540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 70","termid":"PBO:0072540"}


id: MONDO:0011807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic lupus erythematosus with hemolytic anemia, susceptibility to, 1","secondary_identifiers":["MEDGEN:375913","OMIM:607279","UMLS:C1846533"],"synonyms":[{"name":"SLEH1","type":"exact"},{"name":"systemic lupus erythematosus with hemolytic anaemia","type":"exact"},{"name":"systemic lupus erythematosus with hemolytic anemia","type":"exact"},{"name":"systemic lupus erythematosus with hemolytic anemia, susceptibility to, 1","type":"exact"},{"name":"systemic lupus erythematosus, hemolytic Anemia-related","type":"exact"}],"termid":"MONDO:0011807","xrefs":{"Monarch":{"xref_id":"0011807"}}}


id: PBO:0044903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmin","termid":"PBO:0044903"}


id: MONDO:0009106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare congenital abnormality in which the spinal cord is split in half by fibrous or bony tissue. It may present as an isolated phenomenon or in association with spina bifida.","definition_xrefs":["NCIT:C98913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"neural tube defect","termid":"MONDO:0018075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0020022"],"is_obsolete":false,"name":"diastematomyelia","secondary_identifiers":["GARD:1851","MEDGEN:3801","Orphanet:1671","ICD10CM:Q06.2","MedDRA:10012750","icd11.foundation:2070601288","OMIM:222500","UMLS:C0011999","ICD9:742.51","SCTID:49351009"],"synonyms":[{"name":"Dimyelia","type":"related"},{"name":"Pseudodiplomyelia","type":"related"},{"name":"SCM type 1","type":"exact"},{"name":"SSCM","type":"related"},{"name":"diastematomyelia","type":"exact"},{"name":"diplomyelia","type":"related"},{"name":"split cord malformation","type":"related"},{"name":"split cord malformation type 1","type":"exact"},{"name":"split spinal cord malformation","type":"related"}],"termid":"MONDO:0009106","xrefs":{"Monarch":{"xref_id":"0009106"}}}


id: PBO:0030965
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_trimethylation_at_centromere","termid":"PBO:0030965"}


id: MONDO:0014581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital myasthenic syndrome characterized by autosomal dominant inheritance of postsynaptic neuromuscular junction defects, early-onset progressive muscle weakness, and prolonged opening and activity of the acetylcholine receptor channel that has material basis in heterozygous mutation in the CHRNB1 gene on chromosome 17p13.","definition_xrefs":["DOID:0110681","PMID:8872460","PMID:25792100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic congenital myasthenic syndrome","termid":"MONDO:0020344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 2A","secondary_identifiers":["OMIM:616313","MEDGEN:908185","GARD:9895","UMLS:C4225374"],"synonyms":[{"name":"CMS IIa","type":"related"},{"name":"CMS2A","type":"exact"},{"name":"SCCMS","type":"related"},{"name":"congenital myasthenic syndrome 2A slow-channel","type":"exact"},{"name":"congenital myasthenic syndrome type 2A","type":"exact"},{"name":"myasthenic syndrome, congenital, 2A, slow-channel","type":"related"},{"name":"myasthenic syndrome, congenital, postsynaptic slow-channel","type":"related"},{"name":"myasthenic syndrome, congenital, slow-channel","type":"related"},{"name":"myasthenic syndrome, congenital, type IIa","type":"related"},{"name":"slow channel congenital myasthenic syndrome","type":"related"}],"termid":"MONDO:0014581","xrefs":{"Monarch":{"xref_id":"0014581"}}}


id: PBO:0031071
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_stress_during_vegetative_growth","termid":"PBO:0031071"}


id: GO:1903033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of microtubule plus-end binding.","definition_xrefs":["GOC:hjd","GO_REF:0000059","GOC:TermGenie","PMID:16148041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of microtubule binding","termid":"GO:1904528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of microtubule plus-end binding","synonyms":[{"name":"activation of microtubule plus-end binding","type":"narrow"},{"name":"up regulation of microtubule plus-end binding","type":"exact"},{"name":"up-regulation of microtubule plus-end binding","type":"exact"},{"name":"upregulation of microtubule plus-end binding","type":"exact"}],"termid":"GO:1903033"}


id: GO:1904572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of mRNA binding.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:19716792"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mRNA binding (obsolete GO:1904572)","synonyms":[{"name":"down regulation of mRNA binding","type":"exact"},{"name":"down-regulation of mRNA binding","type":"exact"},{"name":"downregulation of mRNA binding","type":"exact"},{"name":"inhibition of mRNA binding","type":"narrow"}],"termid":"GO:1904572"}


id: MONDO:0005527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of neurologic disorders caused by damage to the nervous system following exposure to pharmacologic, biologic, and chemical agents. Examples of neurotoxins include chemotherapy agents, radiation treatment, heavy metals, pesticides, and food additives.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toxic encephalopathy","secondary_identifiers":["MESH:D020258","DOID:3602","EFO:0005595","ICD10CM:G92","NCIT:C27961","ICD9:349.82","SCTID:28394000","Wikipedia:Toxic_encephalopathy"],"synonyms":[{"name":"neurotoxicity","type":"exact"},{"name":"neurotoxicity syndrome","type":"exact"},{"name":"neurotoxicity syndromes","type":"related"}],"termid":"MONDO:0005527","xrefs":{"Monarch":{"xref_id":"0005527"}}}


id: GO:0051255
data:
  {"annotated_genes":["SJAG_04841","SJAG_01613","SJAG_03073","SJAG_01215","SJAG_04745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98732,96780,100938,108342,94260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051256"}]},"cv_name":"biological_process","definition":"The cell cycle process in which aggregation, arrangement and bonding together of a set of components to form the spindle midzone. The spindle midzone is the area in the center of the spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["GOC:ai","PMID:15296749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based process","termid":"GO:0007017"},{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"spindle assembly","termid":"GO:0051225"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01215":null,"SJAG_01613":null,"SJAG_03073":null,"SJAG_04745":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0000226","GO:0044085","GO:0007049","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"spindle midzone assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"spindle midzone biogenesis","type":"exact"},{"name":"spindle midzone biosynthesis","type":"exact"},{"name":"spindle midzone formation","type":"exact"}],"termid":"GO:0051255","terms_by_termid":{"GO:0051256":null}}


id: GO:0072180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the mesonephric duct are generated and organized. A mesonephric duct is a tube drains the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric tubule morphogenesis","termid":"GO:0072171"},{"relation_name":"is_a","term_name":"nephric duct morphogenesis","termid":"GO:0072178"},{"relation_name":"part_of","term_name":"mesonephric duct development","termid":"GO:0072177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric duct morphogenesis","synonyms":[{"name":"Wolffian duct morphogenesis","type":"related"}],"termid":"GO:0072180"}


id: GO:0004184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: peptidyl-L-lysine (or peptidyl-L-arginine) + H2O = peptide + L-lysine (or L-arginine). Release of a C-terminal basic amino acid, preferentially lysine; inactivates bradykinin and anaphylatoxins in blood plasma.","definition_xrefs":["EC:3.4.17.3"],"gene_count":0,"genotype_count":0,"name":"obsolete lysine carboxypeptidase activity (obsolete GO:0004184)","synonyms":[{"name":"CPase N","type":"related"},{"name":"anaphylatoxin inactivator activity","type":"narrow"},{"name":"arginine carboxypeptidase activity","type":"related"},{"name":"bradykinase activity","type":"related"},{"name":"bradykinin-decomposing enzyme","type":"related"},{"name":"carboxypeptidase N activity","type":"exact"},{"name":"creatine kinase conversion factor","type":"related"},{"name":"creatinine kinase convertase activity","type":"related"},{"name":"hippuryllysine hydrolase activity","type":"related"},{"name":"kininase I activity","type":"related"},{"name":"kininase Ia","type":"related"},{"name":"lysine (arginine) carboxypeptidase activity","type":"exact"},{"name":"lysine carboxypeptidase activity","type":"exact"},{"name":"lysine(arginine) carboxypeptidase activity","type":"related"},{"name":"peptidyl-L-lysine(-L-arginine) hydrolase","type":"broad"},{"name":"plasma carboxypeptidase B","type":"related"}],"termid":"GO:0004184"}


id: PBO:0030347
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete,_unequal_mitotic_sister_chromatid_segregation,_with_smeared_DNA","termid":"PBO:0030347"}


id: PR:Q10273
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC13G7.09c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G7.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.09c","synonyms":[{"name":"Spom972h-SPAC13G7.09c","type":"exact"}],"termid":"PR:Q10273"}


id: MONDO:0023148
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetal phenothiazine syndrome","secondary_identifiers":["GARD:2311"],"termid":"MONDO:0023148","xrefs":{"Monarch":{"xref_id":"0023148"}}}


id: MONDO:0004508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the periapical tissue. It includes general, unspecified, or acute nonsuppurative inflammation. Chronic nonsuppurative inflammation is periapical granuloma. Suppurative inflammation is periapical abscess.","definition_xrefs":["MESH:D010485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periodontitis","termid":"MONDO:0005076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periapical periodontitis","secondary_identifiers":["MEDGEN:45396","SCTID:39273001","DOID:823","EFO:1001391","UMLS:C0031030","icd11.foundation:1395124674"],"synonyms":[{"name":"apical periodontitis","type":"exact"}],"termid":"MONDO:0004508","xrefs":{"Monarch":{"xref_id":"0004508"}}}


id: PBO:0055803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophosphatidic acid receptor 5","termid":"PBO:0055803"}


id: GO:1903200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of L-dopa decarboxylase activity.","definition_xrefs":["GO_REF:0000059","GOC:PARL","GOC:TermGenie","PMID:19703902","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of L-dopa decarboxylase activity (obsolete GO:1903200)","synonyms":[{"name":"activation of 4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"narrow"},{"name":"activation of DDC activity","type":"narrow"},{"name":"activation of DOPA decarboxylase activity","type":"narrow"},{"name":"activation of L-dopa decarboxylase activity","type":"narrow"},{"name":"positive regulation of 4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"exact"},{"name":"positive regulation of DDC activity","type":"exact"},{"name":"positive regulation of DOPA decarboxylase activity","type":"exact"},{"name":"up regulation of 4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"exact"},{"name":"up regulation of DDC activity","type":"exact"},{"name":"up regulation of DOPA decarboxylase activity","type":"exact"},{"name":"up regulation of L-dopa decarboxylase activity","type":"exact"},{"name":"up-regulation of 4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"exact"},{"name":"up-regulation of DDC activity","type":"exact"},{"name":"up-regulation of DOPA decarboxylase activity","type":"exact"},{"name":"up-regulation of L-dopa decarboxylase activity","type":"exact"},{"name":"upregulation of 4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"exact"},{"name":"upregulation of DDC activity","type":"exact"},{"name":"upregulation of DOPA decarboxylase activity","type":"exact"},{"name":"upregulation of L-dopa decarboxylase activity","type":"exact"}],"termid":"GO:1903200"}


id: PBO:0081787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 714","termid":"PBO:0081787"}


id: PR:000050545
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein gtr2 (Schizosaccharomyces pombe) that is non-covalently bound to GDP.","definition_xrefs":["PomBase:VW","PMID:27227887","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"GTP-binding protein gtr2 (Schizosaccharomyces pombe)","termid":"PR:000050544"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gtr2/GDP+","pombase_gene_id":"SPCC777.05","synonyms":[{"name":"PomBase_original_PRO_term_name: GTP-binding protein gtr2, GDP-bound form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-gtr2/GDP+","type":"exact"},{"name":"gtr2/GDP+","type":"exact"},{"name":"Gtr2/GDP+","type":"exact"}],"termid":"PR:000050545"}


id: PBO:0081837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 772","termid":"PBO:0081837"}


id: PBO:0113140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor-like protein; involved in negatively regulating TORC1 activity; green fluorescent protein (GFP)-fusion protein localizes to the vacuole","termid":"PBO:0113140"}


id: GO:0032290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the wraps of cell membrane that constitute myelin are laid down around an axon by Schwann cells in the peripheral nervous system.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myelin assembly","termid":"GO:0032288"},{"relation_name":"part_of","term_name":"myelination in peripheral nervous system","termid":"GO:0022011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"peripheral nervous system myelin formation","synonyms":[{"name":"myelin formation in peripheral nervous system","type":"exact"},{"name":"peripheral nervous system myelin sheath formation","type":"exact"}],"termid":"GO:0032290"}


id: GO:0002418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune system process that functions in the response of an organism to a tumor cell.","definition_xrefs":["PMID:16730260","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to tumor cell","termid":"GO:0002347"},{"relation_name":"is_a","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune response to tumor cell","termid":"GO:0002418"}


id: MONDO:0005155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by replacement of the liver parenchyma with fibrous tissue and regenerative nodules. It is usually caused by alcoholism, hepatitis B, and hepatitis C. Complications include the development of ascites, esophageal varices, bleeding, and hepatic encephalopathy.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"cirrhosis of liver","secondary_identifiers":["MEDGEN:7368","DOID:5082","NANDO:2100268","ICD9:571.5","NANDO:2200937","NCIT:C2951","EFO:0001422","SCTID:19943007","MESH:D008103","UMLS:C0023890"],"synonyms":[{"name":"cirrhosis","type":"exact"},{"name":"cirrhosis of liver","type":"exact"},{"name":"liver cirrhosis","type":"related"}],"termid":"MONDO:0005155","xrefs":{"Monarch":{"xref_id":"0005155"}}}


id: MONDO:0032690
data:
  {"annotated_genes":["SJAG_04848"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85563],"is_not":false,"summary":null,"term":"MONDO:0032690"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04848":null},"genotype_count":0,"is_obsolete":false,"name":"microcephaly, growth deficiency, seizures, and brain malformations","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0081051","MEDGEN:1676229","OMIM:618346","UMLS:C5193042"],"synonyms":[{"name":"MICROCEPHALY, GROWTH DEFICIENCY, SEIZURES, AND BRAIN MALFORMATIONS","type":"related"},{"name":"MIGSB","type":"related"}],"termid":"MONDO:0032690","terms_by_termid":{"MONDO:0032690":null},"xrefs":{"Monarch":{"xref_id":"0032690"}}}


id: FYPO:0005331
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the repair of pyrimidine-pyrimidone 6-4 photoproducts by error-prone translesion synthesis occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:20453833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal error-prone translesion synthesis","termid":"FYPO:0003892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000293","FYPO:0000298","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased error-prone translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts","synonyms":[{"name":"decreased error-prone translesion synthesis across TT-(6-4)","type":"exact"},{"name":"decreased error-prone translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts during mitotic cell cycle","type":"related"},{"name":"decreased error-prone translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts during vegetative growth","type":"exact"}],"termid":"FYPO:0005331"}


id: GO:0019727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-mevalonate + NAD+ = H+ + mevaldate + NADH.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete mevaldate reductase (NADH) activity (obsolete GO:0019727)","termid":"GO:0019727"}


id: GO:0030401
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Functions to prevent the termination of RNA synthesis. Acts as a regulatory device, e.g. in phage lambda, enabling a terminator to be masked from RNA polymerase so that distal genes can be expressed.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription antiterminator activity (obsolete GO:0030401)","synonyms":[{"name":"transcription antiterminator activity","type":"exact"},{"name":"transcriptional antiterminator activity","type":"exact"}],"termid":"GO:0030401"}


id: PBO:0079314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 7","termid":"PBO:0079314"}


id: MONDO:0027766
data:
  {"annotated_genes":["SJAG_01537","SJAG_01957","SJAG_00946"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012071"},{"annotations":[84582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010020"},{"annotations":[85600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958023"}]},"cv_name":"mondo","definition":"Almost complete absence of subcutaneous and/or visceral adipose tissue.","definition_xrefs":["NCIT:C131815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipodystrophy","termid":"MONDO:0006573"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00946":null,"SJAG_01537":null,"SJAG_01957":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"generalized lipodystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["HP:0009064","DOID:0080298","MEDGEN:1369615","UMLS:C4317112"],"synonyms":[{"name":"complete generalised lipodystrophy","type":"exact"},{"name":"complete generalized lipodystrophy","type":"exact"}],"termid":"MONDO:0027766","terms_by_termid":{"MONDO:0010020":null,"MONDO:0012071":null,"MONDO:0958023":null},"xrefs":{"Monarch":{"xref_id":"0027766"}}}


id: GO:1902776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 6-sulfoquinovose(1-).","definition_xrefs":["GO_REF:0000068","GOC:TermGenie","GOC:dph","PMID:24463506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid metabolic process","termid":"GO:0006082"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"6-sulfoquinovose(1-) metabolic process","synonyms":[{"name":"6-sulfoquinovose(1-) metabolism","type":"exact"}],"termid":"GO:1902776"}


id: PBO:0064280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and RUN domain containing M1 pseudogene 1","termid":"PBO:0064280"}


id: PBO:0083452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene CTI6/YPL181W","termid":"PBO:0083452"}


id: MONDO:0002087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the peritoneum","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"peritoneal neoplasm","termid":"MONDO:0006901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"peritoneum cancer","secondary_identifiers":["DOID:1725","ICD9:158.8","NCIT:C3538","ICD9:158.9","ICD9:159.8","UMLS:C0153467","MEDGEN:102270","SCTID:363492001"],"synonyms":[{"name":"cancer of peritoneum","type":"exact"},{"name":"cancer of the peritoneum","type":"exact"},{"name":"malignant neoplasm of peritoneum","type":"exact"},{"name":"malignant peritoneal neoplasm","type":"exact"},{"name":"malignant peritoneum neoplasm","type":"exact"},{"name":"peritoneal cancer","type":"exact"},{"name":"peritoneal cavity cancer","type":"exact"},{"name":"peritoneal neoplasm","type":"related"},{"name":"peritoneum cancer","type":"exact"}],"termid":"MONDO:0002087","xrefs":{"Monarch":{"xref_id":"0002087"}}}


id: PBO:0068015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 320","termid":"PBO:0068015"}


id: GO:0015663
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of nicotinamide mononucleotide into, out of or within a cell, or between cells. Nicotinamide mononucleotide is a ribonucleotide in which the nitrogenous base, nicotinamide, is in beta-n-glycosidic linkage with the c-1 position of d-ribose. It is a constituent of NAD and NADP.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transmembrane transporter activity","termid":"GO:0015215"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"nicotinamide mononucleotide transmembrane transporter activity","secondary_identifiers":["GO:0015664"],"synonyms":[{"name":"nicotinamide mononucleotide permease activity","type":"related"},{"name":"nicotinamide ribonucleotide transmembrane transporter activity","type":"exact"}],"termid":"GO:0015663"}


id: PBO:0084233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hydroxymethylpyrimidine (HMP) and HMP-phosphate kinase; involved in thiamine biosynthesis; member of a gene family with THI20 and THI22; functionally redundant with Thi20p","termid":"PBO:0084233"}


id: PBO:0088904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial m-AAA protease Yta12","termid":"PBO:0088904"}


id: PBO:0056560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance 8 homologous recombination repair factor","termid":"PBO:0056560"}


id: GO:1901217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of holin activity.","definition_xrefs":["GOC:bm","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of holin activity (obsolete GO:1901217)","termid":"GO:1901217"}


id: MONDO:0016200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete qualitative or quantitative defects of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase (obsolete MONDO:0016200)","secondary_identifiers":["Orphanet:209203"],"synonyms":[{"name":"qualitative or quantitative defects of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase type -","type":"exact"}],"termid":"MONDO:0016200","xrefs":{"Monarch":{"xref_id":"0016200"}}}


id: FYECO:0000334
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which phloxine B was added to the medium or assay buffer in excess.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ phloxine B","termid":"FYECO:0000334"}


id: PBO:0055581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3017","termid":"PBO:0055581"}


id: GO:1905466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of G-quadruplex DNA unwinding.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26503245"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of G-quadruplex DNA unwinding (obsolete GO:1905466)","synonyms":[{"name":"down regulation of G-quadruplex DNA unwinding","type":"exact"},{"name":"down-regulation of G-quadruplex DNA unwinding","type":"exact"},{"name":"downregulation of G-quadruplex DNA unwinding","type":"exact"},{"name":"inhibition of G-quadruplex DNA unwinding","type":"narrow"}],"termid":"GO:1905466"}


id: PR:O14189
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC10F6.17c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2C homolog C10F6.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.17c","synonyms":[{"name":"Spom972h-SPAC10F6.17c","type":"exact"},{"name":"pyruvate dehydrogenase (Lipoamide) phosphatase C10F6.17c (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14189"}


id: PBO:0053115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 1 pseudogene 2","termid":"PBO:0053115"}


id: MOD:00569
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Natural or modified residues that are isobaric at a resolution below 0.000001 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.01 Da","termid":"MOD:00770"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at a resolution below 0.000001 Da","termid":"MOD:00569"}


id: PBO:0042731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein I pseudogene 1","termid":"PBO:0042731"}


id: PBO:0030884
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cellular_metabolism_phenotype_during_vegetative_growth","termid":"PBO:0030884"}


id: GO:0140839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: RNA polymerase II large subunit CTD heptapeptide repeat (consensus YSPTSPS) cis-proline (omega=180) (position 3) = RNA polymerase II large subunit trans-proline (omega=0) (position 3).","definition_xrefs":["PMID:28248323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II CTD heptapeptide repeat peptidyl-prolyl isomerase activity","termid":"GO:0140838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat P3 isomerase activity","synonyms":[{"name":"RNA polymerase II C-terminal domain P3 isomerase activity","type":"exact"}],"termid":"GO:0140839"}


id: GO:0032377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of lipids within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"regulates","term_name":"intracellular lipid transport","termid":"GO:0032365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of intracellular lipid transport","termid":"GO:0032377"}


id: GO:0098777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Protein secretion through the outer membrane via the mechanism used for the secretion of curli subunits.","definition_xrefs":["PMID:19299134","PMID:24080089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport across the cell outer membrane","termid":"GO:0098776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"protein secretion by the type VIII secretion system","synonyms":[{"name":"T8SS","type":"exact"}],"termid":"GO:0098777"}


id: PBO:0088938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic threonine-tRNA ligase Trs1","termid":"PBO:0088938"}


id: PBO:0048693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLIS family zinc finger 2","termid":"PBO:0048693"}


id: PBO:0075530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E10","termid":"PBO:0075530"}


id: GO:1904004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sebum secreting cell proliferation.","definition_xrefs":["GOC:TermGenie","PMID:16901790","GOC:hjd","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of sebum secreting cell proliferation","termid":"GO:1904002"},{"relation_name":"positively_regulates","term_name":"sebum secreting cell proliferation","termid":"GO:1990654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sebum secreting cell proliferation","synonyms":[{"name":"activation of sebocyte proliferation","type":"related"},{"name":"activation of sebum secreting cell proliferation","type":"narrow"},{"name":"positive regulation of sebocyte proliferation","type":"related"},{"name":"up regulation of sebocyte proliferation","type":"related"},{"name":"up regulation of sebum secreting cell proliferation","type":"exact"},{"name":"up-regulation of sebocyte proliferation","type":"related"},{"name":"up-regulation of sebum secreting cell proliferation","type":"exact"},{"name":"upregulation of sebocyte proliferation","type":"related"},{"name":"upregulation of sebum secreting cell proliferation","type":"exact"}],"termid":"GO:1904004"}


id: PBO:0060914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromin 1 pseudogene 1","termid":"PBO:0060914"}


id: PBO:0062995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl arginine deiminase 1","termid":"PBO:0062995"}


id: PBO:0017932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation machinery associated protein Mep33","termid":"PBO:0017932"}


id: GO:0042968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of homoserine, alpha-amino-gamma-hydroxybutyric acid, an intermediate in the biosynthesis of cystathionine, threonine and methionine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"homoserine transport","termid":"GO:0042968"}


id: PBO:0000121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolase (predicted)","termid":"PBO:0000121"}


id: PBO:0028648
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiosis_I","termid":"PBO:0028648"}


id: GO:1904337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ductus arteriosus closure.","definition_xrefs":["PMID:16303610","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ductus arteriosus closure","termid":"GO:1904335"},{"relation_name":"is_a","term_name":"positive regulation of artery morphogenesis","termid":"GO:1905653"},{"relation_name":"positively_regulates","term_name":"ductus arteriosus closure","termid":"GO:0097070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ductus arteriosus closure","synonyms":[{"name":"activation of ductus arteriosus closure","type":"narrow"},{"name":"up regulation of ductus arteriosus closure","type":"exact"},{"name":"up-regulation of ductus arteriosus closure","type":"exact"},{"name":"upregulation of ductus arteriosus closure","type":"exact"}],"termid":"GO:1904337"}


id: FYPO:0002083
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, is swollen, is elongated, and in which the nucleus is larger than normal. The cell contains one nucleus and no septum. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah","PomBase:vw","PMID:10388806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable swollen elongated vegetative cell","termid":"FYPO:0002251"},{"relation_name":"is_a","term_name":"swollen elongated cell with enlarged nucleus","termid":"FYPO:0005440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0002403"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0001985","FYPO:0000004","FYPO:0000032","FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0000005"],"is_obsolete":false,"name":"inviable swollen elongated cell with enlarged nucleus","synonyms":[{"name":"inviable elongated cell with enlarged nucleus and increased cell volume","type":"exact"},{"name":"inviable elongated vegetative cell with swollen medial region","type":"related"},{"name":"inviable enlarged elongated cell with enlarged nucleus","type":"related"},{"name":"inviable large elongated cell with enlarged nucleus","type":"related"},{"name":"inviable swollen elongated mononucleate aseptate cell with enlarged nucleus","type":"exact"},{"name":"inviable swollen elongated vegetative cell with enlarged nucleus","type":"exact"},{"name":"lethal; swollen elongated cell with enlarged nucleus","type":"exact"}],"termid":"FYPO:0002083"}


id: PATO:0002493
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed anteroventrally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anteroventral orientation","synonyms":[{"name":"anteroventrally directed","type":"exact"}],"termid":"PATO:0002493"}


id: MONDO:0800385
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A heavy metal poisoning that is caused by exposure to iron. Iron toxicity is classified as corrosive or cellular. Ingested iron can cause direct caustic injury to the gastrointestinal mucosa, resulting in nausea, vomiting, abdominal pain, and diarrhea.","definition_xrefs":["MONDO:patterns/patterns/poisoning"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heavy metal poisoning","termid":"MONDO:0023305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron poisoning","synonyms":[{"name":"iron overload","type":"exact"},{"name":"iron toxicity","type":"exact"}],"termid":"MONDO:0800385","xrefs":{"Monarch":{"xref_id":"0800385"}}}


id: PBO:0085628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in Fe-S cluster transfer to mitochondrial clients; protects [4Fe-4S] clusters from damage due to oxidative stress; acts along with Bol3 at a late step in the transfer of [4Fe-4S] clusters from the ISA complex to client proteins; Fe-S loaded homodimer at steady state; similar to NifU, a bacterial protein required for Fe/S cluster maturation; ortholog of the human NFU1, mutations of which are associated with Multiple Mitochondria Dysfunctions Syndrome (MMDS1)","termid":"PBO:0085628"}


id: GO:0045028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a purine nucleotide and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["PMID:9755289","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purinergic nucleotide receptor activity","termid":"GO:0001614"},{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled purinergic nucleotide receptor activity","synonyms":[{"name":"G protein coupled purinergic nucleotide receptor activity","type":"exact"},{"name":"G-protein coupled purinergic nucleotide receptor activity","type":"exact"},{"name":"P2Y","type":"related"},{"name":"P2Y receptor","type":"related"},{"name":"purinergic nucleotide receptor activity, G protein coupled","type":"exact"},{"name":"purinergic nucleotide receptor activity, G-protein coupled","type":"exact"}],"termid":"GO:0045028"}


id: PBO:0072769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100P binding protein","termid":"PBO:0072769"}


id: GO:0004061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-formyl-L-kynurenine + H2O = formate + L-kynurenine.","definition_xrefs":["EC:3.5.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"arylformamidase activity","secondary_identifiers":["Reactome:R-HSA-71189","RHEA:13009","MetaCyc:ARYLFORMAMIDASE-RXN"],"synonyms":[{"name":"aryl-formylamine amidohydrolase activity","type":"related"},{"name":"formamidase I","type":"related"},{"name":"formamidase II","type":"related"},{"name":"formylase activity","type":"related"},{"name":"formylkynureninase activity","type":"related"},{"name":"formylkynurenine formamidase activity","type":"related"},{"name":"kynurenine formamidase activity","type":"related"}],"termid":"GO:0004061"}


id: FYPO:0000206
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at ribosomal DNA repeats is abnormal. Chromatin silencing is the observed effect of processes that repress transcription in a region of the genome that is normally assembled into heterochromatin.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing","termid":"FYPO:0000144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal chromatin silencing at rDNA","synonyms":[{"name":"abnormal chromatin silencing at rDNA during mitotic cell cycle","type":"related"},{"name":"abnormal chromatin silencing at rDNA during vegetative growth","type":"exact"},{"name":"abnormal chromatin silencing at ribosomal DNA","type":"exact"}],"termid":"FYPO:0000206"}


id: PBO:0051223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 7-81 (non-functional)","termid":"PBO:0051223"}


id: GO:0047217
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: Catalysis of the reaction: sucrose + 1,6-alpha-D-glucosyl(n) = 1,6-alpha-D-glucosyl(n+1) + fructose.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete sucrose-1,6-alpha-glucan 3(6)-alpha-glucosyltransferase activity (obsolete GO:0047217)","termid":"GO:0047217"}


id: GO:0009676
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sulfate(out) + H+(out) = sulfate(in) + H+(in). In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.","definition_xrefs":["GOC:mah","PMID:7568135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfate:proton symporter activity","termid":"GO:0008512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"low-affinity sulfate:proton symporter activity","synonyms":[{"name":"low affinity sulfate:hydrogen symporter activity","type":"exact"},{"name":"low affinity sulfate:proton symporter activity","type":"exact"},{"name":"low affinity sulphate:hydrogen symporter activity","type":"exact"}],"termid":"GO:0009676"}


id: PBO:0089513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centaurin ADP ribosylation factor GTPase activating protein family","termid":"PBO:0089513"}


id: MONDO:0958181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial trifunctional protein deficiency","termid":"MONDO:0012172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0005336","MONDO:0002525"],"is_obsolete":false,"name":"mitochondrial trifunctional protein deficiency 1","secondary_identifiers":["OMIM:609015"],"termid":"MONDO:0958181","xrefs":{"Monarch":{"xref_id":"0958181"}}}


id: MONDO:0023129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Fara Chlupackova syndrome (obsolete MONDO:0023129)","termid":"MONDO:0023129","xrefs":{"Monarch":{"xref_id":"0023129"}}}


id: GO:0015763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of N-acetylgalactosamine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. N-acetylgalactosamine, 2-acetamido-2-deoxygalactopyranose, is the n-acetyl derivative of galactosamine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"N-acetylgalactosamine transport","termid":"GO:0015763"}


id: MONDO:0007994
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thanatophoric dysplasia type 2","termid":"MONDO:0008547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"micromelic bone dysplasia with cloverleaf skull","secondary_identifiers":["UMLS:C1834928","MEDGEN:322531","MESH:C536429","GARD:1404","OMIM:156830"],"synonyms":[{"name":"micromelic bone dysplasia with cloverleaf skull","type":"exact"}],"termid":"MONDO:0007994","xrefs":{"Monarch":{"xref_id":"0007994"}}}


id: PBO:0003363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator subunit Iki3 (predicted)","termid":"PBO:0003363"}


id: PBO:0076089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STT3 oligosaccharyltransferase complex catalytic subunit B","termid":"PBO:0076089"}


id: GO:0071621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a granulocyte in response to an external stimulus.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte chemotaxis","termid":"GO:0030595"},{"relation_name":"is_a","term_name":"granulocyte migration","termid":"GO:0097530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"granulocyte chemotaxis","termid":"GO:0071621"}


id: GO:0099008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The entry of a symbiont into the cytoplasm of a host cell, following fusion with the outer membrane, via permeabilization of the plasma (inner) membrane. This process mediates the entry of some non-enveloped viruses into prokaryotic cells. In the case of some double stranded RNA viruses of prokaryotes this occurs via interaction of a membrane-interacting component of the capsid, leading to depolarization and permeabilization of the plasma membrane.","definition_xrefs":["PMID:15795287","PMID:20427561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont entry into host cell via permeabilization of host membrane","termid":"GO:0140267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont entry into host cell via permeabilization of inner membrane","synonyms":[{"name":"viral entry via permeabilization of inner membrane","type":"narrow"}],"termid":"GO:0099008"}


id: MONDO:0015082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alopecia antibody deficiency","secondary_identifiers":["GARD:18713","Orphanet:1006","MEDGEN:1683018","UMLS:C5190867"],"synonyms":[{"name":"IPP-Gelfand syndrome","type":"exact"}],"termid":"MONDO:0015082","xrefs":{"Monarch":{"xref_id":"0015082"}}}


id: MONDO:0002680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A transmissible spongiform encephalopathy (prion disease) of deer and elk characterized by chronic weight loss leading to death. It is thought to spread by direct contact between animals or through environmental contamination with the prion protein (prions).","definition_xrefs":["MESH:D034081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prion disease, non-human animal","termid":"MONDO:0700108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic wasting disease","secondary_identifiers":["DOID:3530"],"termid":"MONDO:0002680","xrefs":{"Monarch":{"xref_id":"0002680"}}}


id: PBO:0079892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase complex assembly factor 1","termid":"PBO:0079892"}


id: MONDO:0017251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pulmonary airway malformation","termid":"MONDO:0016580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital pulmonary airway malformation type 3","secondary_identifiers":["icd11.foundation:1342201768","GARD:21096","MEDGEN:1741544","UMLS:C5437762","Orphanet:280847"],"synonyms":[{"name":"CCAM type 3","type":"exact"},{"name":"CPAM type 3","type":"exact"},{"name":"congenital cystic adenomatoid malformation of the lung type 3","type":"exact"},{"name":"congenital cystic adenomatous malformation of the lung type 3","type":"exact"},{"name":"congenital cystic disease of the lung type 3","type":"exact"}],"termid":"MONDO:0017251","xrefs":{"Monarch":{"xref_id":"0017251"}}}


id: MONDO:0001710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rupture in the wall of the extrahepatic or intrahepatic bile duct due to traumatic or pathologic processes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile duct disorder","termid":"MONDO:0002887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"perforation of bile duct","secondary_identifiers":["ICD9:576.3","MEDGEN:56376","ICD10CM:K83.2","UMLS:C0156218","DOID:13409","icd11.foundation:2011913010","SCTID:37439003"],"termid":"MONDO:0001710","xrefs":{"Monarch":{"xref_id":"0001710"}}}


id: PBO:0077323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 61","termid":"PBO:0077323"}


id: GO:0071175
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch1 (ICN1), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-2 (MAML2); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["PMID:12370315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"MAML2-RBP-Jkappa-ICN1 complex","synonyms":[{"name":"MAML2-RBP-Jkappa-Notch1 complex","type":"exact"}],"termid":"GO:0071175"}


id: MONDO:0800025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic disease characterized by hypertelorism with facial features that can closely resemble craniofrontonasal dysplasia, such as prominent forehead, widow's peak, heavy and broad eyebrows, long palpebral fissures, ptosis, high and broad nasal bridge, short nose, low-set ears, natal teeth, thin upper lip and a grooved chin, as well as limb (i.e. fifth-finger clinodactyly, pes adductus, mild interdigital webbing), urogenital (i.e. bilateral cryptorchidism and shawl scrotum in males) and umbilical (i.e. hernia/small omphalocele) anomalies and cardiac (i.e. ventricular or atrial septal defect, patent ductus arteriosus) defects. Additional findings such as polycystic kidneys and iridochorioretinal colobomas have also been reported and psychomotor development is normal. The facial features can also resemble Aarskog and Opitz G/BBB syndromes.","definition_xrefs":["Orphanet:1519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Teebi hypertelorism syndrome","termid":"MONDO:0030639"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Teebi hypertelorism syndrome 1","secondary_identifiers":["SCTID:724284005","DOID:0080698","GARD:957","OMIM:145420"],"synonyms":[{"name":"Brachycephalofrontonasal dysplasia","type":"exact"},{"name":"Teebi hypertelorism syndrome","type":"broad"},{"name":"Teebi syndrome","type":"broad"},{"name":"craniofrontonasal dysplasia, Teebi type","type":"exact"},{"name":"hypertelorism, Teebi type","type":"broad"}],"termid":"MONDO:0800025","xrefs":{"Monarch":{"xref_id":"0800025"}}}


id: PBO:0067254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 328, pseudogene","termid":"PBO:0067254"}


id: PBO:0091661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Cha4","termid":"PBO:0091661"}


id: GO:0042920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of 3-hydroxyphenylpropionic acid across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["PMID:9098055","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"3-hydroxyphenylpropionic acid transmembrane transport","synonyms":[{"name":"3-(3-hydroxyphenyl)propionic acid transport","type":"exact"},{"name":"3-hydroxyphenylpropionic acid transport","type":"broad"},{"name":"m-hydroxyphenylpropionic acid transport","type":"exact"}],"termid":"GO:0042920"}


id: PBO:0075997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STEAP3 antisense RNA 1","termid":"PBO:0075997"}


id: MONDO:1010727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any leukocyte adhesion deficiency that occurs in dogs due to a mutation in the ITGB2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte adhesion deficiency, non-human animal","termid":"MONDO:1012580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte adhesion deficiency, ITGB2-related, dog","secondary_identifiers":["OMIA:000595-9615"],"synonyms":[{"name":"leukocyte adhesion deficiency type I, dog","type":"related"}],"termid":"MONDO:1010727","xrefs":{"Monarch":{"xref_id":"1010727"}}}


id: GO:1990102
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex containing a tetramer of DiaA attached to multiple DnaA molecule bound to oriC DNA. Regulates timely initiation of chromosomal replication during the cell cycle by stimulating assembly of DnaA-oriC complexes, conformational changes in ATP-DnaA initiation complexes, and unwinding of oriC duplex DNA.","definition_xrefs":["PMID:17699754","PMID:15326179","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primosome complex","termid":"GO:1990077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DnaA-DiaA complex","synonyms":[{"name":"DnaA-DiaA-DNA complex","type":"exact"}],"termid":"GO:1990102"}


id: GO:0006766
data:
  {"annotated_genes":["SJAG_00691","SJAG_03679","SJAG_01383","SJAG_04711","SJAG_01935","SJAG_04067","SJAG_02408","SJAG_00707","SJAG_02491","SJAG_02421","SJAG_00252","SJAG_00265","SJAG_02420","SJAG_00376","SJAG_00673","SJAG_01742","SJAG_05200","SJAG_04481","SJAG_00480","SJAG_01054","SJAG_04156","SJAG_04282","SJAG_01198","SJAG_00283","SJAG_00827","SJAG_02047","SJAG_01881","SJAG_00491","SJAG_03362","SJAG_03538","SJAG_00381","SJAG_03275","SJAG_01425","SJAG_03632","SJAG_02406","SJAG_01543","SJAG_04866","SJAG_01139","SJAG_01126","SJAG_04845","SJAG_02225","SJAG_00043","SJAG_00106","SJAG_02360","SJAG_05230","SJAG_01970","SJAG_00815"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100964],"is_not":false,"summary":null,"term":"GO:0006766"},{"annotations":[92300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[116545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[75735,113595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009102"},{"annotations":[107832,111903,89779,104432,104284,105571,113172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046656"},{"annotations":[113552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046655"},{"annotations":[100112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006769"},{"annotations":[112865,98236,88367,98240,102256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015940"},{"annotations":[88514,113177],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[99189,115193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[100369,113885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042821"},{"annotations":[87198,94980,63766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042823"},{"annotations":[111318],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"},{"annotations":[87199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042818"},{"annotations":[87200,94981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008615"},{"annotations":[92301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008614"},{"annotations":[86949,100645,109871,114272,106466,116667,106273,115227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009231"},{"annotations":[99024,113084,106867,113501,113090,115517,93777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[93778,113091,113502,115518,99025,113085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009229"},{"annotations":[99026,65695,58605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006772"},{"annotations":[109940,109939,99027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"},{"annotations":[100370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042820"},{"annotations":[98524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042816"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving vitamins. Vitamin is a general term for a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body. Vitamins may be water-soluble or fat-soluble and usually serve as components of coenzyme systems.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_00106":null,"SJAG_00252":null,"SJAG_00265":null,"SJAG_00283":null,"SJAG_00376":null,"SJAG_00381":null,"SJAG_00480":null,"SJAG_00491":null,"SJAG_00673":null,"SJAG_00691":null,"SJAG_00707":null,"SJAG_00815":null,"SJAG_00827":null,"SJAG_01054":null,"SJAG_01126":null,"SJAG_01139":null,"SJAG_01198":null,"SJAG_01383":null,"SJAG_01425":null,"SJAG_01543":null,"SJAG_01742":null,"SJAG_01881":null,"SJAG_01935":null,"SJAG_01970":null,"SJAG_02047":null,"SJAG_02225":null,"SJAG_02360":null,"SJAG_02406":null,"SJAG_02408":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_02491":null,"SJAG_03275":null,"SJAG_03362":null,"SJAG_03538":null,"SJAG_03632":null,"SJAG_03679":null,"SJAG_04067":null,"SJAG_04156":null,"SJAG_04282":null,"SJAG_04481":null,"SJAG_04711":null,"SJAG_04845":null,"SJAG_04866":null,"SJAG_05200":null,"SJAG_05230":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"vitamin metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-211916"],"synonyms":[{"name":"vitamin metabolism","type":"exact"}],"termid":"GO:0006766","terms_by_termid":{"GO:0006766":null,"GO:0006769":null,"GO:0006772":null,"GO:0008614":null,"GO:0008615":null,"GO:0009102":null,"GO:0009228":null,"GO:0009229":null,"GO:0009231":null,"GO:0009443":null,"GO:0010144":null,"GO:0015940":null,"GO:0036001":null,"GO:0036172":null,"GO:0042816":null,"GO:0042818":null,"GO:0042820":null,"GO:0042821":null,"GO:0042823":null,"GO:0046655":null,"GO:0046656":null,"GO:0090180":null,"GO:1990181":null}}


id: PBO:0075038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-1","termid":"PBO:0075038"}


id: PR:O13838
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup40 gene.","definition_xrefs":["UniProtKB:O13838","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup40 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19E9.01c","synonyms":[{"name":"Spom972h-nup40","type":"exact"},{"name":"nuclear pore protein nup40 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13838"}


id: MONDO:0001715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"occlusion precerebral artery","termid":"MONDO:0003718"},{"relation_name":"is_a","term_name":"arterial occlusion","termid":"MONDO:0020673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basilar artery occlusion","secondary_identifiers":["ICD9:433.01","DOID:13446","ICD9:433.00","MEDGEN:539076","UMLS:C0265098","SCTID:195180004","ICD9:433.0"],"termid":"MONDO:0001715","xrefs":{"Monarch":{"xref_id":"0001715"}}}


id: GO:1903343
data:
  {"annotated_genes":["SJAG_03048","SJAG_00100"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107844,101880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905263"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of meiotic DNA double-strand break formation.","definition_xrefs":["PMID:25103240","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of meiotic DNA double-strand break formation","termid":"GO:1903341"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"meiotic DNA double-strand break formation","termid":"GO:0042138"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"positive regulation of meiotic DNA double-strand break formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of meiotic DNA double-strand break formation","type":"narrow"},{"name":"up regulation of meiotic DNA double-strand break formation","type":"exact"},{"name":"up-regulation of meiotic DNA double-strand break formation","type":"exact"},{"name":"upregulation of meiotic DNA double-strand break formation","type":"exact"}],"termid":"GO:1903343","terms_by_termid":{"GO:1905263":null}}


id: PBO:0042388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD300H molecule (gene/pseudogene)","termid":"PBO:0042388"}


id: PBO:0068442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 16, pseudogene","termid":"PBO:0068442"}


id: MONDO:0009376
data:
  {"annotated_genes":["SJAG_00392","SJAG_00412"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84545,84546],"is_not":false,"summary":null,"term":"MONDO:0009376"}]},"cv_name":"mondo","definition":"Carbamoyl-phosphate synthetase 1 deficiency (CPS1D) is a rare and severe disorder of urea cycle metabolism most commonly characterized by either a neonatal-onset of severe hyperammonemia that occurs few days after birth and manifests with lethargy, vomiting, hypothermia, seizures, coma and death or a presentation outside the newborn period at any age with (sometimes) milder symptoms of hyperammonemia.","definition_xrefs":["Orphanet:147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urea cycle disorder or inherited hyperammonemia","termid":"MONDO:0800153"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00412":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"carbamoyl phosphate synthetase I deficiency disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:9280","MedDRA:10058297","MEDGEN:907954","NANDO:2200478","NCIT:C84612","SCTID:62522004","icd11.foundation:327894003","GARD:7269","NANDO:1200803","OMIM:237300","UMLS:C4082171","MESH:D020165","EFO:0007193"],"synonyms":[{"name":"CPS 1 deficiency","type":"related"},{"name":"CPS I deficiency","type":"exact"},{"name":"CPS1 deficiency","type":"exact"},{"name":"CPS1D","type":"exact"},{"name":"carbamoyl phosphate synthetase 1 deficiency","type":"related"},{"name":"carbamoyl phosphate synthetase 1 deficiency, hyperammonemia due to","type":"related"},{"name":"carbamoyl phosphate synthetase I deficiency disease","type":"exact"},{"name":"carbamoyl phosphate synthetase I deficiency, hyperammonemia due to","type":"related"},{"name":"carbamoyl phosphate synthetase deficiency","type":"exact"},{"name":"carbamoyl-phosphate synthase deficiency disease","type":"exact"},{"name":"carbamoyl-phosphate synthetase 1 deficiency","type":"related"},{"name":"carbamoyl-phosphate synthetase I deficiency","type":"exact"},{"name":"carbamoyl-phosphate synthetase deficiency","type":"exact"},{"name":"carbamoylphosphate synthetase I deficiency","type":"exact"},{"name":"carbamyl phosphate synthetase (CPS) deficiency","type":"related"},{"name":"hyperammonemia due to carbamoyl phosphate synthetase 1 deficiency","type":"related"}],"termid":"MONDO:0009376","terms_by_termid":{"MONDO:0009376":null},"xrefs":{"Monarch":{"xref_id":"0009376"}}}


id: PBO:0090578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-vacuole tethering sorting nexin Snx12","termid":"PBO:0090578"}


id: PR:O74779
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mmb1 gene.","definition_xrefs":["UniProtKB:O74779","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule-associated protein mug164 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25B2.07c","synonyms":[{"name":"Spom972h-mmb1","type":"exact"},{"name":"meiotically up-regulated gene 164 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74779"}


id: MONDO:0015209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A gastroduodenal malformation that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic gastroduodenal malformation (obsolete MONDO:0015209)","secondary_identifiers":["Orphanet:108963"],"synonyms":[{"name":"isolated gastroduodenal malformation","type":"exact"},{"name":"nonsyndromic gastroduodenal malformation","type":"exact"}],"termid":"MONDO:0015209","xrefs":{"Monarch":{"xref_id":"0015209"}}}


id: PATO:0000604
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000604 orientation value (obsolete PATO:0000604)","termid":"PATO:0000604"}


id: PR:Q9UTE3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- seb1 gene.","definition_xrefs":["UniProtKB:Q9UTE3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rpb7-binding protein seb1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.09","synonyms":[{"name":"Spom972h-seb1","type":"exact"}],"termid":"PR:Q9UTE3"}


id: PBO:0028828
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_localization_to_chromatin","termid":"PBO:0028828"}


id: GO:0060709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a glycogen cell of the placenta. A glycogen cell is a vacuolated glycogen-rich cell that appears in compact cell islets of the spongiotrophoblast layer.","definition_xrefs":["GOC:dph","PMID:16269175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in embryonic placenta development","termid":"GO:0060706"},{"relation_name":"part_of","term_name":"spongiotrophoblast layer development","termid":"GO:0060712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycogen cell differentiation involved in embryonic placenta development","termid":"GO:0060709"}


id: PBO:0091582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Cox1102/ mitochondrial ribosomal protein Rsm2202, fusion protein","termid":"PBO:0091582"}


id: FYPO:0003454
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is not normally found in the nucleus is observed there during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to nucleus","termid":"FYPO:0003453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"protein mislocalized to nucleus during meiosis I","synonyms":[{"name":"ectopic protein localization to nucleus during meiosis I","type":"exact"},{"name":"protein mislocalised to nucleus during meiosis I","type":"exact"},{"name":"protein mislocalized to nucleus during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003454"}


id: MONDO:0044704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that involves the oropharynx.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pharyngeal squamous cell carcinoma","termid":"MONDO:0000536"},{"relation_name":"is_a","term_name":"oropharyngeal carcinoma","termid":"MONDO:0044926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"oropharynx squamous cell carcinoma","secondary_identifiers":["MEDGEN:76094","GARD:17928","ONCOTREE:OPHSC","UMLS:C0280313","icd11.foundation:839740136","NCIT:C8181","Orphanet:500478"],"synonyms":[{"name":"epidermoid carcinoma of oropharynx","type":"exact"},{"name":"epidermoid carcinoma of the oropharynx","type":"exact"},{"name":"oropharyngeal epidermoid carcinoma","type":"exact"},{"name":"oropharyngeal squamous cell carcinoma","type":"exact"},{"name":"oropharyngeal throat squamous cell cancer","type":"exact"},{"name":"squamous cell carcinoma of oropharynx","type":"exact"},{"name":"squamous cell carcinoma of the oropharynx","type":"related"}],"termid":"MONDO:0044704","xrefs":{"Monarch":{"xref_id":"0044704"}}}


id: PBO:0072315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 1","termid":"PBO:0072315"}


id: PBO:0055990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and transmembrane domains 2","termid":"PBO:0055990"}


id: FYPO:0004485
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the deacetylation of one or more specific proteins is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"abnormal protein deacetylation during vegetative growth","synonyms":[{"name":"abnormal protein deacetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004485"}


id: PBO:0113502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 2'-phosphotransferase; catalyzes the final step in tRNA splicing, transferring the 2'-PO(4) from the splice junction to NAD(+), forming ADP-ribose 1''-2''cyclic phosphate and nicotinamide; ADP-ribosyltransferase that ADP-ribosylates 5'-phosphorylated ssDNA and ssRNAs; human and mouse orthologs complement the inviability of the yeast null mutant","termid":"PBO:0113502"}


id: PBO:0048330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 41","termid":"PBO:0048330"}


id: PBO:0072450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 14","termid":"PBO:0072450"}


id: MONDO:0003422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, well circumscribed epithelial neoplasm that arises from the bronchus or the lung parenchyma. Representative examples include alveolar adenoma, papillary adenoma, and mucus gland adenoma.","definition_xrefs":["NCIT:C4455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung benign neoplasm","termid":"MONDO:0002732"},{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lung adenoma","secondary_identifiers":["SCTID:254642004","MEDGEN:83394","UMLS:C0345964","DOID:5386"],"synonyms":[{"name":"adenoma of lung","type":"exact"},{"name":"adenoma of the lung","type":"exact"},{"name":"lung adenoma","type":"exact"},{"name":"pulmonary adenoma","type":"exact"}],"termid":"MONDO:0003422","xrefs":{"Monarch":{"xref_id":"0003422"}}}


id: PBO:0076064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm tail PG-rich repeat containing 2","termid":"PBO:0076064"}


id: GO:0009334
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Enzyme complex consisting of four proteins: the two subunits of the hydroxylase component (hcaE and hcaF), a ferredoxin (hcaC) and a ferredoxin reductase (hcaD). Converts 3-phenylpropionic acid (PP) into cis-3-(3-carboxyethyl)-3,5-cyclohexadiene-1,2-diol (PP-dihydrodiol).","definition_xrefs":["PMID:9603882","MetaCyc:HCAMULTI-CPLX","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"3-phenylpropionate dioxygenase complex","termid":"GO:0009334"}


id: GO:0051742
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methyl-6-solanyl-1,4-benzoquinone + S-adenosyl-methionine = 2,3-dimethyl-6-solanyl-1,4-benzoquinone + S-adenosyl-homocysteine.","definition_xrefs":["MetaCyc:RXN-2762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"2-methyl-6-solanyl-1,4-benzoquinone methyltransferase activity","secondary_identifiers":["RHEA:37999"],"synonyms":[{"name":"MSBQ methyltransferase activity","type":"exact"}],"termid":"GO:0051742"}


id: MONDO:0016308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Niemann-Pick disease type C","termid":"MONDO:0018982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005046","MONDO:0006025","MONDO:0002525","MONDO:0002561"],"is_obsolete":false,"name":"Niemann-Pick disease type C, late infantile neurologic onset","secondary_identifiers":["GARD:20506","MEDGEN:1843353","Orphanet:216978","icd11.foundation:2075382821","UMLS:C5680867"],"termid":"MONDO:0016308","xrefs":{"Monarch":{"xref_id":"0016308"}}}


id: PBO:0035959
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K4_methylation_at_mating_type_locus_during_vegetative_growth","termid":"PBO:0035959"}


id: MONDO:0002365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangiopericytoma arising from the kidney.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangiopericytoma","termid":"MONDO:0005094"},{"relation_name":"is_a","term_name":"kidney neoplasm","termid":"MONDO:0021163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"kidney hemangiopericytoma","secondary_identifiers":["DOID:262","MEDGEN:1847044","UMLS:C5848097","NCIT:C4527","SCTID:254923001"],"synonyms":[{"name":"hemangiopericytoma of kidney","type":"exact"},{"name":"hemangiopericytoma of the kidney","type":"exact"},{"name":"kidney hemangiopericytoma","type":"exact"},{"name":"kidney spindle cell tumor","type":"exact"},{"name":"kidney spindle cell tumour","type":"exact"},{"name":"renal hemangiopericytoma","type":"exact"}],"termid":"MONDO:0002365","xrefs":{"Monarch":{"xref_id":"0002365"}}}


id: PBO:0064217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCB2 antisense RNA 1","termid":"PBO:0064217"}


id: PBO:0043622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cartilage oligomeric matrix protein","termid":"PBO:0043622"}


id: MONDO:0001583
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"diabetic neuropathy","termid":"MONDO:0006626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"diabetic polyneuropathy","secondary_identifiers":["DOID:12785","icd11.foundation:1837670870","ICD9:357.2","SCTID:49455004","UMLS:C0271680","MEDGEN:75763"],"synonyms":[{"name":"diabetes mellitus with polyneuropathy","type":"exact"},{"name":"polyneuropathy in diabetes","type":"exact"}],"termid":"MONDO:0001583","xrefs":{"Monarch":{"xref_id":"0001583"}}}


id: GO:0035836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an ergot alkaloid, an indole alkaloid.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"terpenoid indole alkaloid metabolic process","termid":"GO:0046447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"ergot alkaloid metabolic process","synonyms":[{"name":"ergot alkaloid metabolism","type":"exact"}],"termid":"GO:0035836"}


id: FYPO:0000957
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing methyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0002060","FYPO:0000003","FYPO:0000257","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on methyl methanesulfonate","synonyms":[{"name":"normal cell population growth in presence of methyl methanesulfonate","type":"exact"},{"name":"normal cell population growth on MMS","type":"exact"},{"name":"normal cell population growth on methyl methanesulfonate","type":"exact"},{"name":"normal cellular response to methyl methanesulfonate","type":"related"},{"name":"normal growth on methyl methanesulphonate","type":"exact"},{"name":"normal vegetative cell population growth on methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0000957"}


id: MONDO:0016510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epibulbar lipodermoid B preauricular appendages B polythelia is a branchial arch syndrome described in seven sibs of one Danish family and characterized by supernumerary nipples (polythelia), preauricular appendages and often binocular epibulbar lipodermoids or unilateral subconjunctival lipodermoids.","definition_xrefs":["Orphanet:231742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epibulbar lipodermoid-preauricular appendage-polythelia syndrome","secondary_identifiers":["UMLS:C5680927","GARD:20625","MEDGEN:1808551"],"termid":"MONDO:0016510","xrefs":{"Monarch":{"xref_id":"0016510"}}}


id: PBO:0065466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 8","termid":"PBO:0065466"}


id: GO:0035977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of sugar residues from a glycosylated protein that contributes to the breakdown of a glycoprotein.","definition_xrefs":["GOC:bf","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deglycosylation","termid":"GO:0006517"},{"relation_name":"part_of","term_name":"glycoprotein catabolic process","termid":"GO:0006516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"protein deglycosylation involved in glycoprotein catabolic process","termid":"GO:0035977"}


id: MONDO:0100508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of uncommon neoplasms, usually seen in the salivary glands but occurring in the breast, with a variable clinicopathologic spectrum and divided into those with myoepithelial differentiation and those without. This group includes mammary adenoid cystic carcinoma, adenoid cystic carcinoma, mucoepidermoid carcinoma, acinic cell carcinoma, polymorphous low-grade adenocarcinoma and oncocytic carcinoma.","definition_xrefs":["Orphanet:213557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast cancer","termid":"MONDO:0007254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"salivary gland type cancer of the breast","secondary_identifiers":["GARD:12774","ICD10CM:C50.3","ICD10CM:C50.6","SCTID:716593008","icd11.foundation:2145246967","ICD10CM:C50.2","UMLS:C4274421","MEDGEN:903115"],"synonyms":[{"name":"salivary gland type carcinoma of the breast","type":"exact"}],"termid":"MONDO:0100508","xrefs":{"Monarch":{"xref_id":"0100508"}}}


id: GO:0090308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency, or extent of DNA methylation-dependent heterochromatin formation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA methylation-dependent heterochromatin formation (obsolete GO:0090308)","synonyms":[{"name":"regulation of DNA methylation-dependent heterochromatin assembly","type":"exact"},{"name":"regulation of methylation-dependent chromatin silencing","type":"broad"}],"termid":"GO:0090308"}


id: PBO:0001685
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains DRE element","termid":"PBO:0001685"}


id: PBO:0057958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3680-2","termid":"PBO:0057958"}


id: FYPO:0002586
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial tRNA 3'-end processing is normal (i.e. indistinguishable from wild type). In mitochondrial tRNA 3'-end processing, the 3' end of a mitochondrial pre-tRNA molecule is converted to that of a mature mitochondrial tRNA.","definition_xrefs":["GO:0006396","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA processing","termid":"FYPO:0001980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal mitochondrial tRNA 3'-end processing","synonyms":[{"name":"normal mitochondrial tRNA 3'-end processing during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial tRNA 3'-end processing during vegetative growth","type":"exact"},{"name":"normal mitochondrial transfer RNA 3'-end processing","type":"exact"}],"termid":"FYPO:0002586"}


id: GO:1904925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of autophagy of the mitochondrion in response to mitochondrial depolarization.","definition_xrefs":["PMID:22020285","GOC:pad","GO_REF:0000058","GOC:PARL","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of autophagy of mitochondrion in response to mitochondrial depolarization (obsolete GO:1904925)","termid":"GO:1904925"}


id: GO:0007436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the larva, by which the anatomical structures of the salivary gland are generated and organized.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland morphogenesis","termid":"GO:0007435"},{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"instar larval development","termid":"GO:0002168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval salivary gland morphogenesis","termid":"GO:0007436"}


id: PBO:0071922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S3 pseudogene 7","termid":"PBO:0071922"}


id: PBO:0058764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6888","termid":"PBO:0058764"}


id: MONDO:0012432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the CEP290 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome with oculorenal defect","termid":"MONDO:0009480"},{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"},{"relation_name":"is_a","term_name":"CEP290-related ciliopathy","termid":"MONDO:0100451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0020022"],"is_obsolete":false,"name":"Joubert syndrome 5","secondary_identifiers":["UMLS:C1857780","MEDGEN:347545","DOID:0111000","MESH:C537688","OMIM:610188","GARD:15475"],"synonyms":[{"name":"CEP290 Joubert syndrome","type":"exact"},{"name":"JBTS5","type":"exact"},{"name":"Joubert syndrome 5","type":"exact"},{"name":"Joubert syndrome caused by mutation in CEP290","type":"exact"},{"name":"Joubert syndrome type 5","type":"exact"}],"termid":"MONDO:0012432","xrefs":{"Monarch":{"xref_id":"0012432"}}}


id: SO:0001220
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing an epigenetic process where a gene is inactivated by RNA interference.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silenced","termid":"SO:0000893"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced_by_RNA_interference","synonyms":[{"name":"silenced by RNA interference","type":"exact"}],"termid":"SO:0001220"}


id: PBO:0059642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 8","termid":"PBO:0059642"}


id: GO:0050455
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 columbamine + O2 = 2 berberine + 2 H2O.","definition_xrefs":["RHEA:23564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with oxygen as acceptor","termid":"GO:0046993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"columbamine oxidase activity","secondary_identifiers":["KEGG_REACTION:R00044","MetaCyc:COLUMBAMINE-OXIDASE-RXN","EC:1.21.3.2"],"synonyms":[{"name":"berberine synthase activity","type":"related"},{"name":"columbamine:oxygen oxidoreductase (cyclizing)","type":"related"}],"termid":"GO:0050455"}


id: MONDO:0018406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare male infertility due to adrenal disorder of genetic origin (obsolete MONDO:0018406)","secondary_identifiers":["Orphanet:399994"],"termid":"MONDO:0018406","xrefs":{"Monarch":{"xref_id":"0018406"}}}


id: PBO:0064059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 93","termid":"PBO:0064059"}


id: PBO:0026897
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_nitrogen_starvation","termid":"PBO:0026897"}


id: PATO:0000702
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000702 threshold value (obsolete PATO:0000702)","termid":"PATO:0000702"}


id: PBO:0035745
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoplasmic_microtubules_nucleated_from_eMTOC_absent_from_cell","termid":"PBO:0035745"}


id: FYPO:0001393
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the activation of monopolar cell growth, i.e. the initiation of growth at the old end of a cell following cell division, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of cell growth","termid":"FYPO:0001392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal activation of monopolar cell growth","synonyms":[{"name":"abnormal regulation of monopolar vegetative cell growth","type":"related"}],"termid":"FYPO:0001393"}


id: PBO:0059721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 29","termid":"PBO:0059721"}


id: PBO:0062846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OSTM1 antisense RNA 1","termid":"PBO:0062846"}


id: GO:0046112
data:
  {"annotated_genes":["SJAG_00779","SJAG_04354","SJAG_00694","SJAG_05024","SJAG_00964","SJAG_00197","SJAG_03164","SJAG_01661","SJAG_01814","SJAG_00392","SJAG_02364","SJAG_03140","SJAG_00444","SJAG_01081","SJAG_01859"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111403,115073,116213,87260,92897,97996,110565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006207"},{"annotations":[109742,109856,116853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046084"},{"annotations":[93017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006168"},{"annotations":[109743,97298,114002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009113"},{"annotations":[88929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019856"},{"annotations":[91456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006223"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a nucleobase, a nitrogenous base that is a constituent of a nucleic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"nucleobase metabolic process","termid":"GO:0009112"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00392":null,"SJAG_00444":null,"SJAG_00694":null,"SJAG_00779":null,"SJAG_00964":null,"SJAG_01081":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_02364":null,"SJAG_03140":null,"SJAG_03164":null,"SJAG_04354":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"nucleobase biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleobase anabolism","type":"exact"},{"name":"nucleobase biosynthesis","type":"exact"},{"name":"nucleobase formation","type":"exact"},{"name":"nucleobase synthesis","type":"exact"}],"termid":"GO:0046112","terms_by_termid":{"GO:0006168":null,"GO:0006207":null,"GO:0006223":null,"GO:0009113":null,"GO:0019856":null,"GO:0046084":null}}


id: GO:0045152
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an antisigma factor, a factor which inhibits the ability of the sigma factor to function as a transcriptional initiator.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"antisigma factor binding","synonyms":[{"name":"antisigma factor antagonist activity","type":"narrow"}],"termid":"GO:0045152"}


id: GO:0002096
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A punctate, filamentous structure composed of Bcl10 that appears in the cytoplasm of T-cells shortly after T-cell receptor stimulation. Polkadots stands for Punctate Oligomeric Killing and Activating DOmains Transducing Signals.","definition_xrefs":["PMID:14724296","PMID:16495340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"polkadots","termid":"GO:0002096"}


id: SO:0001659
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An element that can exist within the promoter region of a gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"overlaps","term_name":"TF_binding_site","termid":"SO:0000235"},{"relation_name":"part_of","term_name":"promoter","termid":"SO:0000167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter_element","synonyms":[{"name":"promoter element","type":"exact"}],"termid":"SO:0001659"}


id: PBO:0029441
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_metabolic_process","termid":"PBO:0029441"}


id: PBO:0053246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHX1 divergent transcript","termid":"PBO:0053246"}


id: PBO:0067722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 20","termid":"PBO:0067722"}


id: GO:1990334
data:
  {"annotated_genes":["SJAG_01386","SJAG_04943"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92315,99162],"is_not":false,"summary":null,"term":"GO:1990334"}]},"cv_name":"cellular_component","definition":"A protein complex that acts as a two-component GTPase-activating protein for Tem1 GTPase, thus regulating a signal transduction cascade, called the mitotic exit network (MEN), which is required for mitotic exit and cytokinesis. Bub2/Bfa1 keeps Tem1 inactive until the spindle is properly oriented, thus inhibiting MEN activation.","definition_xrefs":["PMID:16449187","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTPase activator complex","termid":"GO:1902773"},{"relation_name":"part_of","term_name":"spindle pole body","termid":"GO:0005816"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01386":null,"SJAG_04943":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005816"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0005816","GO:0032991","GO:0015630"],"is_obsolete":false,"name":"Bfa1-Bub2 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990334","terms_by_termid":{"GO:1990334":null}}


id: GO:1900105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hyaluranon cable assembly.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of hyaluranon cable assembly","termid":"GO:1900104"},{"relation_name":"negatively_regulates","term_name":"hyaluranon cable assembly","termid":"GO:0036118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of hyaluranon cable assembly","synonyms":[{"name":"down regulation of HA cable assembly","type":"exact"},{"name":"down regulation of hyaluranon cable assembly","type":"exact"},{"name":"down-regulation of HA cable assembly","type":"exact"},{"name":"down-regulation of hyaluranon cable assembly","type":"exact"},{"name":"downregulation of HA cable assembly","type":"exact"},{"name":"downregulation of hyaluranon cable assembly","type":"exact"},{"name":"inhibition of HA cable assembly","type":"exact"},{"name":"inhibition of hyaluranon cable assembly","type":"narrow"},{"name":"negative regulation of HA cable assembly","type":"exact"}],"termid":"GO:1900105"}


id: MONDO:0005835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant hereditary neoplastic syndrome characterized by the development of colorectal carcinoma and a high risk of developing endometrial carcinoma, gastric carcinoma, ovarian carcinoma, renal pelvis carcinoma, and small intestinal carcinoma. Patients often develop colorectal carcinomas at an early age (mean, 45 years). In the majority of the cases the lesions arise from the proximal colon. At the molecular level, high-frequency microsatellite instability is present.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hereditary nonpolyposis colon cancer","termid":"MONDO:0018630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0000426","MONDO:0004992"],"is_obsolete":false,"name":"Lynch syndrome","secondary_identifiers":["GARD:9905","NORD:1386","SCTID:716318002","UMLS:C4552100","NCIT:C8494","MEDGEN:1633554","DOID:3883","MedDRA:10051981","Orphanet:144"],"synonyms":[{"name":"HNPCC - hereditary nonpolyposis colon cancer","type":"broad"},{"name":"Hereditary colorectal endometrial cancer syndrome","type":"exact"},{"name":"Hereditary non-polyposis colon cancer (hMSH2, hMLH1, hPMS1, hPMS2)","type":"exact"},{"name":"Hereditary nonpolyposis colon cancer (hMSH2, hMLH1, hPMS1, hPMS2)","type":"exact"},{"name":"Lynch syndrome","type":"exact"},{"name":"familial non-polyposis colon cancer (hMSH2, hMLH1, hPMS1, hPMS2)","type":"exact"},{"name":"hereditary defective mismatch repair syndrome","type":"exact"},{"name":"hereditary non-polyposis colon cancer type 1","type":"exact"},{"name":"hereditary nonpolyposis colorectal cancer","type":"broad"},{"name":"hereditary nonpolyposis colorectal neoplasm","type":"broad"}],"termid":"MONDO:0005835","xrefs":{"Monarch":{"xref_id":"0005835"}}}


id: MONDO:0100325
data:
  {"annotated_genes":["SJAG_04528"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84692],"is_not":false,"summary":null,"term":"MONDO:0100325"}]},"cv_name":"mondo","definition":"A very rare syndrome associating chondrodysplasia with dentinogenesis imperfecta.","definition_xrefs":["Orphanet:166272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odontochondrodysplasia","termid":"MONDO:0031169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04528":null},"genotype_count":0,"is_obsolete":false,"name":"odontochondrodysplasia 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1784281","GARD:8717","SCTID:717823001","UMLS:C5542277","OMIM:184260"],"synonyms":[{"name":"Goldblatt chondrodysplasia","type":"exact"},{"name":"Goldblatt syndrome","type":"exact"},{"name":"ODCD","type":"exact"},{"name":"chondrodysplasia-dentinogenesis imperfecta-joint laxity syndrome","type":"exact"},{"name":"odontochondrodysplasia","type":"broad"},{"name":"spondylometaphyseal dysplasia with dentinogenesis imperfecta","type":"related"}],"termid":"MONDO:0100325","terms_by_termid":{"MONDO:0100325":null},"xrefs":{"Monarch":{"xref_id":"0100325"}}}


id: PBO:0008516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anamorsin family protein, involved in iron-sulfur cluster assembly (predicted)","termid":"PBO:0008516"}


id: MONDO:0008532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teeth present at birth","secondary_identifiers":["HP:0000695","OMIM:187050","MEDGEN:10268","SCTID:21995002","UMLS:C0027443"],"synonyms":[{"name":"Natal teeth","type":"related"},{"name":"teeth present AT birth","type":"related"},{"name":"teeth present at birth","type":"exact"},{"name":"teeth present at birth (disease)","type":"exact"}],"termid":"MONDO:0008532","xrefs":{"Monarch":{"xref_id":"0008532"}}}


id: RO:0002215
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation between a material entity (such as a cell) and a process, in which the material entity has the ability to carry out the process. ","direct_ancestors":[{"relation_name":"is_a","term_name":"capable_of_part_of","termid":"RO:0002216"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capable_of","termid":"RO:0002215"}


id: GO:0008656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the rate of proteolysis catalyzed by a cysteine-type endopeptidase involved in the apoptotic process.","definition_xrefs":["GOC:mah","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activator activity involved in apoptotic process","termid":"GO:0016505"},{"relation_name":"is_a","term_name":"cysteine-type endopeptidase regulator activity involved in apoptotic process","termid":"GO:0043028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140677","GO:0030234","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"cysteine-type endopeptidase activator activity involved in apoptotic process","secondary_identifiers":["Reactome:R-HSA-449073","Reactome:R-HSA-205117"],"synonyms":[{"name":"caspase activator activity","type":"broad"}],"termid":"GO:0008656"}


id: GO:0003035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which information about the levels of carbon dioxide are received and are converted to a molecular signal by chemoreceptors in a carotid body.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of increased carbon dioxide by chemoreceptor signaling","termid":"GO:0003021"},{"relation_name":"part_of","term_name":"detection of hypoxic conditions in blood by carotid body chemoreceptor signaling","termid":"GO:0003029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of increased carbon dioxide by carotid body chemoreceptor signaling","synonyms":[{"name":"detection of increased carbon dioxide by carotid body chemoreceptor signalling","type":"exact"}],"termid":"GO:0003035"}


id: FYPO:0005262
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is increased relative to normal in a medium containing maltose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0002057","FYPO:0002058","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"increased cell population growth on maltose carbon source","synonyms":[{"name":"increased growth on maltose carbon source","type":"broad"},{"name":"increased vegetative cell growth on maltose carbon source","type":"exact"}],"termid":"FYPO:0005262"}


id: PBO:0085900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may be involved in mitochondrial DNA maintenance; required for slowed DNA synthesis-induced filamentous growth","termid":"PBO:0085900"}


id: GO:0000340
data:
  {"annotated_genes":["SJAG_00507","SJAG_03223","SJAG_01625","SJAG_04360","SJAG_01830"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89381,99275,104256,112973,114876],"is_not":false,"summary":null,"term":"GO:0000340"}]},"cv_name":"molecular_function","definition":"Binding to a 7-methylguanosine group added cotranscriptionally to the 5' end of RNA molecules transcribed by polymerase II.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA cap binding","termid":"GO:0000339"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00507":null,"SJAG_01625":null,"SJAG_01830":null,"SJAG_03223":null,"SJAG_04360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"RNA 7-methylguanosine cap binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA m7G cap binding","type":"exact"}],"termid":"GO:0000340","terms_by_termid":{"GO:0000340":null}}


id: MONDO:0957385
data:
  {"annotated_genes":["SJAG_02210"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85831],"is_not":false,"summary":null,"term":"MONDO:0957385"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited dystonia","termid":"MONDO:0044807"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02210":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"dystonia 37, early-onset, with striatal lesions","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620427","DOID:0060956","MEDGEN:1841228","UMLS:C5830592"],"termid":"MONDO:0957385","terms_by_termid":{"MONDO:0957385":null},"xrefs":{"Monarch":{"xref_id":"0957385"}}}


id: GO:0002324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a natural killer cell population by cell division as part of an immune response.","definition_xrefs":["GOC:add","PMID:15032583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural killer cell proliferation","termid":"GO:0001787"},{"relation_name":"is_a","term_name":"lymphocyte activation involved in immune response","termid":"GO:0002285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell proliferation involved in immune response","synonyms":[{"name":"NK cell proliferation during immune response","type":"related"},{"name":"natural killer cell proliferation during immune response","type":"related"}],"termid":"GO:0002324"}


id: GO:0007208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipase C-activating receptor G protein-coupled receptor signaling pathway initiated by serotonin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:tb","GOC:dph","GOC:signaling","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"},{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor signaling pathway","termid":"GO:0098664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"phospholipase C-activating serotonin receptor signaling pathway","synonyms":[{"name":"activation of phospholipase C activity by serotonin receptor signaling pathway","type":"related"},{"name":"activation of phospholipase C activity by serotonin receptor signalling pathway","type":"related"},{"name":"serotonin receptor, phospholipase C activating pathway","type":"related"}],"termid":"GO:0007208"}


id: PBO:0038830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 3","termid":"PBO:0038830"}


id: PBO:0086050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function reputedly involved in spore wall assembly","termid":"PBO:0086050"}


id: PBO:0083255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; largely overlaps ORF YPL113C; diploid deletion in BY4743 strain background exhibits high budding index","termid":"PBO:0083255"}


id: PBO:0041880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CATIP antisense RNA 2","termid":"PBO:0041880"}


id: PBO:0111831
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain protein","termid":"PBO:0111831"}


id: PBO:0003248
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"merged with ncRNA","termid":"PBO:0003248"}


id: PBO:0077641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMX4 antisense RNA 1","termid":"PBO:0077641"}


id: GO:0097036
data:
  {"annotated_genes":["SJAG_00870","SJAG_00261"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100698,100976],"is_not":false,"summary":null,"term":"GO:0097036"}]},"cv_name":"biological_process","definition":"Any process that modulates the proportions or spatial arrangement of sterols in the plasma membrane.","definition_xrefs":["PMID:18441123","GOC:mah","PMID:20823909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"is_a","term_name":"regulation of membrane lipid distribution","termid":"GO:0097035"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00261":null,"SJAG_00870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"regulation of plasma membrane sterol distribution","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097036","terms_by_termid":{"GO:0097036":null}}


id: PBO:0085090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear exosome-associated nucleic acid binding protein; involved in RNA processing, surveillance, degradation, tethering, and export; forms a stable heterodimer with Rrp6p and regulates its exonucleolytic activity; rapidly degraded by the proteasome in the absence of Rrp6p; homolog of mammalian nuclear matrix protein C1D involved in regulation of DNA repair and recombination","termid":"PBO:0085090"}


id: GO:1990810
data:
  {"annotated_genes":["SJAG_03116","SJAG_01613","SJAG_01546","SJAG_03062"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96259,98725,102549,108514],"is_not":false,"summary":null,"term":"GO:1990810"}]},"cv_name":"biological_process","definition":"Any process in which a microtubule is maintained in a specific location in a cell by attachment to a mitotic spindle pole body. Microtubules attach to spindle pole bodies at the minus end.","definition_xrefs":["PMID:17486116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule anchoring at spindle pole body","termid":"GO:0034631"},{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization involved in mitosis","termid":"GO:1902850"},{"relation_name":"part_of","term_name":"mitotic spindle assembly","termid":"GO:0090307"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01546":null,"SJAG_01613":null,"SJAG_03062":null,"SJAG_03116":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000070"}],"interesting_parent_ids":["GO:0007010","GO:0000070","GO:0044085","GO:0008150","GO:0000226","GO:0007049"],"is_obsolete":false,"name":"microtubule anchoring at mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990810","terms_by_termid":{"GO:1990810":null}}


id: FYPO:0001234
data:
  {"alleles_by_uniquename":{"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118671,118709,118729,118730,118793,118856,118857,118899,119027,119028],"is_not":false,"summary":null,"term":"FYPO:0001234"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which vegetative cell population growth is slower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell population growth","termid":"FYPO:0001356"},{"relation_name":"is_a","term_name":"viable vegetative cell population","termid":"FYPO:0002060"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_00429":null,"SJAG_00514":null,"SJAG_01242":null,"SJAG_01355":null,"SJAG_02763":null,"SJAG_03449":null,"SJAG_03892":null,"SJAG_05207":null},"genotype_count":9,"genotypes_by_uniquename":{"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"rad26delta":{"display_name":"rad26delta","display_uniquename":"rad26delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00429:allele-1","expression":"Null"}]}]},"rad3delta":{"display_name":"rad3delta","display_uniquename":"rad3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00364:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0002058","FYPO:0002060"],"is_obsolete":false,"name":"slow vegetative cell population growth","references_by_uniquename":{"PMID:23090706":null,"PMID:24184107":null,"PMID:26774782":null,"PMID:30664646":null,"PMID:32109380":null,"PMID:32243490":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_02763","SJAG_05207","SJAG_00514","SJAG_01242","SJAG_03892","SJAG_03449","SJAG_00429","SJAG_00364","SJAG_01355"],"single_locus_genotype_uniquenames":["scd1delta","vps4delta","rad26delta","man1delta","cox6delta","cmp7delta","rad3delta","vps32delta","ned1delta"],"synonyms":[{"name":"decreased cell population proliferation","type":"related"},{"name":"decreased cell proliferation","type":"related"},{"name":"decreased vegetative cell population growth rate","type":"exact"},{"name":"growth defect, slow growth","type":"broad"},{"name":"increased doubling time","type":"related"},{"name":"reduced cell proliferation","type":"related"},{"name":"reduced vegetative cell population growth rate","type":"exact"}],"termid":"FYPO:0001234","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000103":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0001234":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: FYPO:0003162
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell is too low to detect during a cellular response to salt stress. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to salt stress","termid":"FYPO:0002304"},{"relation_name":"is_a","term_name":"RNA absent from cell during vegetative growth","termid":"FYPO:0003161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"RNA absent from cell during cellular response to salt stress","synonyms":[{"name":"RNA absent from cell during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"RNA absent from cell during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"transcripts absent from cell during cellular response to salt stress","type":"exact"},{"name":"undetectable RNA level during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0003162"}


id: GO:0046853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group into inositol or a phosphatidylinositol. Inositol is the cyclic alcohol 1,2,3,4,5,6-cyclohexanehexol, which is widely distributed in nature and acts as a growth factor in animals and microorganisms.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol or phosphatidylinositol phosphorylation (obsolete GO:0046853)","synonyms":[{"name":"inositol and derivative phosphorylation","type":"related"},{"name":"inositol or phosphatidylinositol phosphorylation","type":"exact"},{"name":"myo-inositol and derivative phosphorylation","type":"related"},{"name":"myo-inositol or phosphatidyl-myo-inositol phosphorylation","type":"narrow"}],"termid":"GO:0046853"}


id: GO:0007453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures derived from the clypeo-labral disc are generated and organized. This includes the transformation of a clypeo-labal imaginal disc from a monolayered epithelium in the larvae of holometabolous insects into recognizable adult structures including the labrum, anterior and posterior cibarial plates, fish trap bristles, epistomal sclerite and clypeus.","definition_xrefs":["ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"},{"relation_name":"part_of","term_name":"clypeo-labral disc development","termid":"GO:0035213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clypeo-labral disc morphogenesis","synonyms":[{"name":"clypeo-labral disc metamorphosis","type":"exact"},{"name":"morphogenesis of structures derived from the clypeo-labral disc","type":"exact"}],"termid":"GO:0007453"}


id: PBO:0002144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF654 family protein","termid":"PBO:0002144"}


id: GO:0047042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + androsterone = NAD(P)H + H+ + 5-alpha-androstane-3,17-dione. The reaction is B-specific (i.e. the pro-S hydrogen is transferred from the 4-position of reduced nicotinamide cofactor) with respect to NAD(P)+.","definition_xrefs":["EC:1.1.1.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"androsterone dehydrogenase [NAD(P)+] activity","termid":"GO:0047023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"androsterone dehydrogenase (B-specific) activity","secondary_identifiers":["Wikipedia:3alpha-hydroxysteroid_dehydrogenase_(B-specific)"],"synonyms":[{"name":"3-alpha-HSD activity","type":"related"},{"name":"3-alpha-hydroxysteroid dehydrogenase (B-specific) activity","type":"broad"},{"name":"3alpha-HSD","type":"related"},{"name":"3alpha-hydroxysteroid dehydrogenase (B-specific)","type":"broad"},{"name":"3alpha-hydroxysteroid oxidoreductase activity","type":"broad"},{"name":"3alpha-hydroxysteroid:NAD(P)+ oxidoreductase (B-specific)","type":"broad"},{"name":"hydroxyprostaglandin dehydrogenase activity","type":"related"},{"name":"sterognost 3alpha","type":"related"}],"termid":"GO:0047042"}


id: PBO:0058743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6867","termid":"PBO:0058743"}


id: GO:0001830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate commitment of precursor cells that will become trophectoderm cells.","definition_xrefs":["ISBN:0124020607","GOC:dph","ISBN:0198542771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"trophectodermal cell differentiation","termid":"GO:0001829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trophectodermal cell fate commitment","synonyms":[{"name":"trophectoderm cell fate commitment","type":"exact"}],"termid":"GO:0001830"}


id: PBO:0039243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 1 family member A3","termid":"PBO:0039243"}


id: PBO:0035707
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-S10_phosphorylation_during_vegetative_growth","termid":"PBO:0035707"}


id: MONDO:0700181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fibrosarcoma that occurs in a cat.","definition_xrefs":["NCIT:C134560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoma, non-human animal","termid":"MONDO:0700131"},{"relation_name":"is_a","term_name":"feline neoplasm","termid":"MONDO:0700175"},{"relation_name":"is_a","term_name":"connective tissue disorder, non-human animal","termid":"MONDO:1011309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feline fibrosarcoma","termid":"MONDO:0700181","xrefs":{"Monarch":{"xref_id":"0700181"}}}


id: MOD:01205
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3 hydrogen atom of a serine residue with a carbohydrate-like group composed of Hex1HexNAc1NeuAc2 linked through a glycosidic bond.","definition_xrefs":["PubMed:7949339","Unimod:160#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hex1HexNAc1NeuAc2 glycosylated residue","termid":"MOD:00528"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"Hex1HexNAc1NeuAc2 O-glycosylated serine","synonyms":[{"name":"Hex(1)HexNAc(1)NeuAc(2)","type":"related"},{"name":"Hex1HexNAc1NeuAc2","type":"related"}],"termid":"MOD:01205"}


id: FYPO:0007107
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which microtubule cytoskeleton organization is normal (i.e. indistinguishable from wild type) during meiosis I. Microtubule cytoskeleton organization is the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins.","definition_xrefs":["GO:0000226","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cellular process during meiotic cell cycle","termid":"FYPO:0007277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal microtubule cytoskeleton organization during meiosis I","synonyms":[{"name":"normal microtubule cytoskeleton organisation during meiosis I","type":"exact"},{"name":"normal microtubule cytoskeleton organization during first meiotic nuclear division","type":"exact"},{"name":"normal microtubule dynamics during meiosis I","type":"exact"},{"name":"normal microtubule organization during meiosis I","type":"related"}],"termid":"FYPO:0007107"}


id: GO:0006777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands.","definition_xrefs":["ISSN:09498257","PMID:22370186","PMID:23201473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mo-molybdopterin cofactor metabolic process","termid":"GO:0019720"},{"relation_name":"is_a","term_name":"molybdopterin cofactor biosynthetic process","termid":"GO:0032324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Mo-molybdopterin cofactor biosynthetic process","secondary_identifiers":["MetaCyc:PWY-6823"],"synonyms":[{"name":"Mo-molybdopterin cofactor anabolism","type":"exact"},{"name":"Mo-molybdopterin cofactor biosynthesis","type":"exact"},{"name":"Mo-molybdopterin cofactor formation","type":"exact"},{"name":"Mo-molybdopterin cofactor synthesis","type":"exact"},{"name":"Moco biosynthesis","type":"exact"},{"name":"Moco biosynthetic process","type":"exact"},{"name":"molybdenum cofactor biosynthetic process","type":"related"}],"termid":"GO:0006777"}


id: PBO:0082974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic serine/threonine protein kinase; identified as a high-copy suppressor of the synthetic lethality of a sis2 sit4 double mutant, suggesting a role in G1/S phase progression; VHS1 has a paralog, SKS1, that arose from the whole genome duplication","termid":"PBO:0082974"}


id: GO:0090601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which nucleated precursor cells lose their nucleus.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"enucleation","termid":"GO:0090601"}


id: SO:1000083
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Sequence variant increases the stability (half-life) of the transcript.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000083 sequence_variant_increasing_transcript_stability (obsolete SO:1000083)","synonyms":[{"name":"mutation increasing transcript stability","type":"related"},{"name":"sequence variant increasing transcript stability","type":"exact"}],"termid":"SO:1000083"}


id: GO:0070702
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner of two mucus layers secreted by epithelial cells in the colon; the inner mucus layer is firmly attached to the epithelium, is densely packed with a compact stratified appearance and is devoid of bacteria.","definition_xrefs":["GOC:mm2","PMID:18806221","PMID:19432394","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucus layer","termid":"GO:0070701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"inner mucus layer","termid":"GO:0070702"}


id: GO:0047487
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-(4-deoxy-alpha-D-gluc-4-enuronosyl)-D-galacturonate = 2 5-dehydro-4-deoxy-D-glucuronate.","definition_xrefs":["MetaCyc:OLIGOGALACTURONIDE-LYASE-RXN","EC:4.2.2.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"oligogalacturonide lyase activity","secondary_identifiers":["RHEA:20269"],"synonyms":[{"name":"OGTE","type":"related"},{"name":"oligogalacturonate lyase activity","type":"related"},{"name":"unsaturated oligogalacturonate transeliminase activity","type":"related"}],"termid":"GO:0047487"}


id: PBO:0048597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth hormone receptor","termid":"PBO:0048597"}


id: GO:1901339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of store-operated calcium channel activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion transmembrane transporter activity","termid":"GO:1901019"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of store-operated calcium channel activity","termid":"GO:1901339"}


id: GO:0042713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expulsion of seminal fluid, thick white fluid containing spermatozoa, from the male genital tract.","definition_xrefs":["GOC:jl","PMID:26385403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"insemination","termid":"GO:0007320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sperm ejaculation","termid":"GO:0042713"}


id: GO:0047939
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-gulonate + NADP+ = D-glucuronate + H+ + NADPH.","definition_xrefs":["EC:1.1.1.19","RHEA:14909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-glucuronate reductase activity","secondary_identifiers":["KEGG_REACTION:R01481","MetaCyc:GLUCURONATE-REDUCTASE-RXN","Reactome:R-HSA-5661256"],"synonyms":[{"name":"D-glucuronate dehydrogenase activity","type":"related"},{"name":"D-glucuronate reductase activity","type":"narrow"},{"name":"NADP-L-gulonate dehydrogenase activity","type":"related"},{"name":"TPN-L-gulonate dehydrogenase activity","type":"related"},{"name":"aldehyde reductase II activity","type":"related"},{"name":"glucuronate dehydrogenase activity","type":"related"},{"name":"glucuronate reductase activity","type":"exact"}],"termid":"GO:0047939"}


id: PBO:0001814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC transporter Pdr1","termid":"PBO:0001814"}


id: PBO:0065797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H domain containing 4","termid":"PBO:0065797"}


id: PBO:0052252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 21","termid":"PBO:0052252"}


id: MONDO:0004647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant epithelial neoplasm which is confined to the epithelial layer without evidence of further tissue invasion.","definition_xrefs":["NCIT:C2917"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pre-malignant neoplasm","termid":"MONDO:0000611"},{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"},{"relation_name":"is_a","term_name":"high grade malignant neoplasm","termid":"MONDO:0020665"},{"relation_name":"is_a","term_name":"precancerous condition","termid":"MONDO:0021074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"in situ carcinoma","secondary_identifiers":["DOID:8719","ICD9:230-234.99","UMLS:C0007099","ICD9:234.8","SCTID:109355002","MEDGEN:763","ICDO:8010/2","MESH:D002278","ICD9:234.9"],"synonyms":[{"name":"CIS","type":"broad"},{"name":"carcinoma in situ","type":"exact"},{"name":"carcinoma, in situ, malignant","type":"exact"},{"name":"epithelial tumor, in situ, malignant","type":"exact"},{"name":"intraepithelial carcinoma","type":"exact"},{"name":"non-invasive carcinoma","type":"exact"},{"name":"stage 0 disease","type":"exact"}],"termid":"MONDO:0004647","xrefs":{"Monarch":{"xref_id":"0004647"}}}


id: GO:0042072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cell adhesion receptor inhibitor activity (obsolete GO:0042072)","synonyms":[{"name":"cell adhesion receptor inhibitor activity","type":"exact"}],"termid":"GO:0042072"}


id: GO:0097500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a receptor is transported to, or maintained in, a location within a non-motile cilium.","definition_xrefs":["GOC:cilia","GOC:kmv","PMID:23128241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to non-motile cilium","termid":"GO:0097499"},{"relation_name":"is_a","term_name":"protein localization to ciliary membrane","termid":"GO:1903441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"receptor localization to non-motile cilium","synonyms":[{"name":"receptor localization to nonmotile primary cilium","type":"related"}],"termid":"GO:0097500"}


id: PBO:0072433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S28 pseudogene 7","termid":"PBO:0072433"}


id: PBO:0042548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 12","termid":"PBO:0042548"}


id: MONDO:0002886
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the common bile duct.","direct_ancestors":[{"relation_name":"is_a","term_name":"bile duct disorder","termid":"MONDO:0002887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"common bile duct disorder","secondary_identifiers":["DOID:4137","UMLS:C0009440","MEDGEN:3545","MESH:D003137"],"synonyms":[{"name":"common bile duct disease","type":"exact"},{"name":"common bile duct disease or disorder","type":"exact"},{"name":"disease of common bile duct","type":"exact"},{"name":"disease or disorder of common bile duct","type":"exact"},{"name":"disorder of common bile duct","type":"exact"}],"termid":"MONDO:0002886","xrefs":{"Monarch":{"xref_id":"0002886"}}}


id: GO:0017014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent addition of a nitric oxide group to an amino acid within a protein.","definition_xrefs":["PMID:20972426","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein nitrosylation","synonyms":[{"name":"protein amino acid nitrosylation","type":"exact"}],"termid":"GO:0017014"}


id: FYPO:0005869
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable and has one nucleus and more than one septum, and the cell diameter is larger than normal and the cell length is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"},{"relation_name":"is_a","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"},{"relation_name":"is_a","term_name":"inviable stubby septated vegetative cell","termid":"FYPO:0002200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0000032","FYPO:0005447","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"inviable stubby multiseptate vegetative cell","synonyms":[{"name":"inviable stubby multiseptate cell during vegetative growth","type":"exact"},{"name":"inviable stubby multiseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable watermelon-shaped multiseptate vegetative cell","type":"exact"},{"name":"lethal; stubby multiseptate vegetative cell","type":"exact"},{"name":"stubby multiseptate inviable vegetative cell","type":"exact"}],"termid":"FYPO:0005869"}


id: SO:0001585
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby at least one base of a codon is changed resulting in a codon that encodes for a different but similar amino acid. These variants may or may not be deleterious.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"missense_variant","termid":"SO:0001583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conservative_missense_variant","synonyms":[{"name":"conservative missense codon","type":"exact"},{"name":"conservative missense variant","type":"exact"},{"name":"neutral missense codon","type":"related"},{"name":"quiet missense codon","type":"related"}],"termid":"SO:0001585"}


id: FYPO:0001808
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of adenine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal adenine import","termid":"FYPO:0001807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased adenine import","synonyms":[{"name":"decreased adenine import across plasma membrane","type":"exact"},{"name":"decreased adenine import during mitotic cell cycle","type":"related"},{"name":"decreased adenine import during vegetative growth","type":"exact"},{"name":"decreased adenine import into cell","type":"exact"},{"name":"decreased adenine uptake","type":"exact"},{"name":"reduced adenine import","type":"exact"}],"termid":"FYPO:0001808"}


id: PBO:0082786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the TOM (translocase of outer membrane) complex; responsible for recognition and initial import steps for all mitochondrially directed proteins; constitutes the core element of the protein conducting pore; pre-Tom40p is phosphorylated by PKA, which impairs its import into mitochondria under non-respiratory conditions","termid":"PBO:0082786"}


id: MONDO:0010564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deuteranopia is a type of color vision deficiency where the green photoreceptors are absent. It affects hue discrimination in the same way as protanopia, but without the dimming effect. Like protanopia, it is hereditary, sex-linked, and found in about 1% of the male population.","definition_xrefs":["EFO:0005581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colorblindness, partial","termid":"MONDO:0000014"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"red-green color blindness","secondary_identifiers":["ICD9:368.52","UMLS:C0155016","SCTID:77479002","ICD10CM:H53.53","DOID:13909","MEDGEN:102324","OMIM:303800","Orphanet:319698"],"synonyms":[{"name":"CBD","type":"related"},{"name":"Deutan colorblindness","type":"related"},{"name":"Deutan defect","type":"exact"},{"name":"Deuteranomaly","type":"related"},{"name":"Green colorblindness","type":"related"},{"name":"colorblindness, deutan","type":"exact"},{"name":"colorblindness, partial, DEUTAN series","type":"related"},{"name":"deuteranopia","type":"exact"},{"name":"partial achromatopsia, deutan type","type":"exact"},{"name":"reduced red-green discrimination","type":"exact"}],"termid":"MONDO:0010564","xrefs":{"Monarch":{"xref_id":"0010564"}}}


id: GO:1904934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell proliferation in midbrain.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GOC:bf","PMID:18953410","PMID:24431302","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell proliferation in midbrain","termid":"GO:1904933"},{"relation_name":"is_a","term_name":"negative regulation of neural precursor cell proliferation","termid":"GO:2000178"},{"relation_name":"negatively_regulates","term_name":"cell proliferation in midbrain","termid":"GO:0033278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell proliferation in midbrain","synonyms":[{"name":"down regulation of cell proliferation in mesencephalon","type":"exact"},{"name":"down regulation of cell proliferation in midbrain","type":"exact"},{"name":"down regulation of mesencepahalic cell proliferation","type":"related"},{"name":"down-regulation of cell proliferation in mesencephalon","type":"exact"},{"name":"down-regulation of cell proliferation in midbrain","type":"exact"},{"name":"down-regulation of mesencepahalic cell proliferation","type":"related"},{"name":"downregulation of cell proliferation in mesencephalon","type":"exact"},{"name":"downregulation of cell proliferation in midbrain","type":"exact"},{"name":"downregulation of mesencepahalic cell proliferation","type":"related"},{"name":"inhibition of cell proliferation in mesencephalon","type":"narrow"},{"name":"inhibition of cell proliferation in midbrain","type":"narrow"},{"name":"inhibition of mesencepahalic cell proliferation","type":"related"},{"name":"negative regulation of cell proliferation in mesencephalon","type":"exact"},{"name":"negative regulation of mesencepahalic cell proliferation","type":"related"}],"termid":"GO:1904934"}


id: MONDO:0968988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare spinal dysraphism characterized by a meningocele, containing a stalk, that is attached to the inner surface of the meningocele. The stalk can be posteriorly fibroneural (saccular limited dorsal myeloschisis) or the spinal cord itself (myelic limited dorsal malformation).","definition_xrefs":["Orphanet:645319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida cystica","termid":"MONDO:0017069"},{"relation_name":"is_a","term_name":"limited dorsal myeloschisis","termid":"MONDO:0958345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"saccular spinal dysraphism with a stalk to the dome","secondary_identifiers":["UMLS:C5816721","MEDGEN:1853133"],"termid":"MONDO:0968988","xrefs":{"Monarch":{"xref_id":"0968988"}}}


id: PBO:0055657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3097","termid":"PBO:0055657"}


id: MONDO:0003447
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon benign neoplasm of the sweat glands characterized by the presence of clear cells.","definition_xrefs":["NCIT:C7567"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hidradenoma","termid":"MONDO:0002805"},{"relation_name":"is_a","term_name":"clear cell adenoma","termid":"MONDO:0003426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"clear cell hidradenoma","secondary_identifiers":["MEDGEN:234584","SCTID:400099008","UMLS:C1370701","DOID:5443"],"synonyms":[{"name":"clear cell hidradenoma","type":"exact"},{"name":"clear cell hidradenoma (morphologic abnormality)","type":"exact"},{"name":"clear cell myoepithelioma","type":"exact"}],"termid":"MONDO:0003447","xrefs":{"Monarch":{"xref_id":"0003447"}}}


id: MONDO:0006576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe cellulitis of the submaxillary space with secondary involvement of the sublingual and submental space. It usually results from infection in the lower molar area or from a penetrating injury to the mouth floor. (From Dorland, 27th ed)","definition_xrefs":["MESH:D008158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellulitis","termid":"MONDO:0005230"},{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Ludwig's angina","secondary_identifiers":["SCTID:196542004","UMLS:C0024081","Wikipedia:Ludwig's_angina","ICD9:528.3","DOID:4558","MEDGEN:44205"],"synonyms":[{"name":"Ludwig angina","type":"exact"},{"name":"cellulitis (disease) of mouth floor","type":"exact"},{"name":"cellulitis of floor of mouth","type":"exact"},{"name":"mouth floor cellulitis (disease)","type":"exact"}],"termid":"MONDO:0006576","xrefs":{"Monarch":{"xref_id":"0006576"}}}


id: MONDO:0030920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 54","secondary_identifiers":["GARD:16474","DOID:0080230","UMLS:C4540484","MEDGEN:1614787","OMIM:617799"],"synonyms":[{"name":"MRD54","type":"related"},{"name":"autosomal dominant intellectual disability 54","type":"related"},{"name":"autosomal dominant mental retardation 54","type":"related"},{"name":"intellectual disability, autosomal dominant 54","type":"exact"},{"name":"mental retardation, autosomal dominant 54","type":"related"}],"termid":"MONDO:0030920","xrefs":{"Monarch":{"xref_id":"0030920"}}}


id: PBO:0055695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIX1L antisense RNA 1","termid":"PBO:0055695"}


id: PATO:0000027
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000027 electrolyte composition (obsolete PATO:0000027)","termid":"PATO:0000027"}


id: MONDO:1012129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin A deficiency, non-human animal","termid":"MONDO:1011726"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin A deficiency, gray wolf","secondary_identifiers":["OMIA:000552-9612"],"termid":"MONDO:1012129","xrefs":{"Monarch":{"xref_id":"1012129"}}}


id: PBO:0058696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6824","termid":"PBO:0058696"}


id: FYPO:0003187
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found associated with astral microtubules during mitosis is observed there during mitosis. The protein may or may not normally associate with astral microtubules during other cell cycle phases.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"protein mislocalized to astral microtubule during mitosis","synonyms":[{"name":"ectopic protein localization to astral microtubule during mitosis","type":"exact"},{"name":"protein mislocalised to astral microtubule during mitosis","type":"exact"},{"name":"protein mislocalized to astral microtubule during mitosis during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to astral microtubule during mitosis during vegetative growth","type":"exact"},{"name":"protein mislocalized to astral microtubule during mitotic M phase","type":"related"},{"name":"protein mislocalized to astral microtubule during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0003187"}


id: GO:1903847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aorta morphogenesis.","definition_xrefs":["GOC:rph","PMID:22269326","GO_REF:0000058","GOC:TermGenie","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of artery morphogenesis","termid":"GO:1905651"},{"relation_name":"regulates","term_name":"aorta morphogenesis","termid":"GO:0035909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of aorta morphogenesis","termid":"GO:1903847"}


id: MONDO:0001904
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete inflammatory and toxic neuropathy (obsolete MONDO:0002336)","termid":"MONDO:0002336"},{"relation_name":"is_a","term_name":"polyneuropathy","termid":"MONDO:0001824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"polyneuropathy due to drug","secondary_identifiers":["ICD9:357.6","SCTID:7339009","DOID:14184","UMLS:C0154762","MEDGEN:509649"],"termid":"MONDO:0001904","xrefs":{"Monarch":{"xref_id":"0001904"}}}


id: PBO:0088069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease; removes ubiquitin from ubiquitinated proteins; controls K63 homeostasis during oxidative stress; deubiquitinates Rsp5p and is required for MVB sorting of membrane proteins; can cleave polyubiquitin and has isopeptidase activity","termid":"PBO:0088069"}


id: MONDO:0009626
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Mendelian disease characterized by the presence of microcephaly and intracranial calcifications at birth accompanied by neurological delay, seizures and a clinical course similar to that seen in patients after intrauterine infection with Toxoplasma gondii, Rubella, Cytomegalovirus, Herpes simplex (so-called TORCH syndrome), or other agents, despite repeated tests revealing the absence of any known infectious agent.","definition_xrefs":["Orphanet:1229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"pseudo-TORCH syndrome","secondary_identifiers":["GARD:12426","DOID:0050656","MEDGEN:483678","OMIMPS:251290","SCTID:722390006","UMLS:C3489725"],"synonyms":[{"name":"BLC-PMG","type":"exact"},{"name":"BLCPMG","type":"related"},{"name":"Baraitser Brett Piesowicz syndrome","type":"related"},{"name":"Baraitser-Brett-Piesowicz syndrome","type":"exact"},{"name":"Baraitser-Reardon syndrome","type":"exact"},{"name":"band-like calcification with simplified gyration and polymicrogyria","type":"exact"},{"name":"bilateral band-like calcification with polymicrogyria","type":"exact"},{"name":"congenital intrauterine infection-like syndrome","type":"related"},{"name":"microcephaly - intracranial calcification - intellectual disability","type":"related"},{"name":"microcephaly intracranial calcification","type":"related"},{"name":"microcephaly-intracranial calcification-intellectual disability syndrome","type":"exact"},{"name":"pseudo-TORCH syndrome","type":"exact"}],"termid":"MONDO:0009626","xrefs":{"Monarch":{"xref_id":"0009626"}}}


id: MONDO:0004069
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