# terms

id: PBO:0001718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OB fold","termid":"PBO:0001718"}


id: FYPO:0001407
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing glucose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002060","FYPO:0005447","FYPO:0002058","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"decreased cell population growth on glucose carbon source","secondary_identifiers":["FYPO:0001163","FYPO:0001161"],"synonyms":[{"name":"decreased aerobic cell population growth on glucose carbon source","type":"narrow"},{"name":"decreased growth on glucose carbon source","type":"broad"},{"name":"decreased hypoxic cell population growth on glucose carbon source","type":"narrow"},{"name":"decreased vegetative cell growth on glucose carbon source","type":"exact"},{"name":"reduced cell growth on glucose carbon source","type":"exact"},{"name":"slow cell growth on glucose carbon source","type":"narrow"}],"termid":"FYPO:0001407"}


id: GO:0009966
data:
  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id: GO:0120082
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subcompartment of the smooth endoplasmic reticulum consisting of lumenal expansion into a flattened, disc-shaped cavity.","definition_xrefs":["PMID:12112448","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"smooth endoplasmic reticulum","termid":"GO:0005790"},{"relation_name":"part_of","term_name":"endoplasmic reticulum cisternal network","termid":"GO:0071781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005783","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"smooth endoplasmic reticulum cisterna","termid":"GO:0120082"}


id: PBO:0002803
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heart disease","termid":"PBO:0002803"}


id: GO:0016460
data:
  {"annotated_genes":["SJAG_00228","SJAG_04781","SJAG_01665","SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[79350,97139,100196,100760,117377],"is_not":false,"summary":null,"term":"GO:0016460"}]},"cv_name":"cellular_component","definition":"A myosin complex containing two class II myosin heavy chains, two myosin essential light chains and two myosin regulatory light chains. Also known as classical myosin or conventional myosin, the myosin II class includes the major muscle myosin of vertebrate and invertebrate muscle, and is characterized by alpha-helical coiled coil tails that self assemble to form a variety of filament structures.","definition_xrefs":["Wikipedia:Myosin"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin complex","termid":"GO:0016459"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00228":null,"SJAG_01665":null,"SJAG_02431":null,"SJAG_03703":null,"SJAG_04781":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0015629","GO:0005575"],"is_obsolete":false,"name":"myosin II complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"conventional myosin","type":"related"}],"termid":"GO:0016460","terms_by_termid":{"GO:0016460":null}}


id: GO:0062099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of programmed necrotic cell death.","definition_xrefs":["GOC:aruk","GOC:rph","PMID:27258785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of programmed cell death","termid":"GO:0043069"},{"relation_name":"is_a","term_name":"regulation of programmed necrotic cell death","termid":"GO:0062098"},{"relation_name":"negatively_regulates","term_name":"programmed necrotic cell death","termid":"GO:0097300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of programmed necrotic cell death","termid":"GO:0062099"}


id: FYPO:0005432
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mitotic recombination is decreased both at recombination hotspots and elsewhere in the genome.","definition_xrefs":["PMID:12019258","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic recombination","termid":"FYPO:0000482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000293","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"globally decreased mitotic recombination","synonyms":[{"name":"globally decreased mitotic recombination during mitotic cell cycle","type":"related"},{"name":"globally decreased mitotic recombination during vegetative growth","type":"exact"},{"name":"globally reduced mitotic recombination","type":"exact"}],"termid":"FYPO:0005432"}


id: MONDO:0006521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cutaneous eruptions resembling acne, characterized by the presence of papulonodules, pustules, comedones, or cysts in the face, trunk, and extremities. Causes include infections and the use of certain medications (e.g., antibiotics and steroids).","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acneiform dermatitis","secondary_identifiers":["DOID:4399","NCIT:C35277","MEDGEN:68607","EFO:1000662","UMLS:C0234894"],"synonyms":[{"name":"Rash acneiform","type":"exact"}],"termid":"MONDO:0006521","xrefs":{"Monarch":{"xref_id":"0006521"}}}


id: MONDO:0005850
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Virus diseases caused by the poxviridae.","definition_xrefs":["MESH:D011213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"milker's nodule","secondary_identifiers":["DOID:8729","ICD9:051.1","ICD9:051.9","SCTID:27240009","UMLS:C0026143","MEDGEN:44449"],"synonyms":[{"name":"Paravaccinia","type":"exact"},{"name":"Pseudocowpox","type":"related"},{"name":"milker nodule","type":"exact"},{"name":"milkers' node","type":"exact"}],"termid":"MONDO:0005850","xrefs":{"Monarch":{"xref_id":"0005850"}}}


id: PBO:0082346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase; component of the mitochondrial degradosome along with the RNase Dss1p; the degradosome associates with the ribosome and mediates RNA turnover; also required during splicing of the COX1 AI5_beta intron; expression of a processed form of human homolog SUPV3L1 carrying an N-terminal deletion of 46 amino acids rescues yeast suv3 null mutant","termid":"PBO:0082346"}


id: MONDO:0016963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete partial duplication of the long arm of chromosome 13 (obsolete MONDO:0016963)","termid":"MONDO:0016963","xrefs":{"Monarch":{"xref_id":"0016963"}}}


id: GO:0018859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 4-hydroxybenzoate + CoA = AMP + diphosphate + 4-hydroxybenzoyl-CoA.","definition_xrefs":["EC:6.2.1.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"4-hydroxybenzoate-CoA ligase activity","secondary_identifiers":["MetaCyc:4-HYDROXYBENZOATE--COA-LIGASE-RXN","UM-BBD_reactionID:r0156","KEGG_REACTION:R01300","RHEA:23116"],"synonyms":[{"name":"4-hydroxybenzoate-CoA synthetase activity","type":"related"},{"name":"4-hydroxybenzoate-coenzyme A ligase (AMP-forming)","type":"related"},{"name":"4-hydroxybenzoate:CoA ligase (AMP-forming)","type":"related"},{"name":"4-hydroxybenzoyl coenzyme A synthetase activity","type":"related"},{"name":"4-hydroxybenzoyl-CoA ligase activity","type":"related"}],"termid":"GO:0018859"}


id: PBO:0048077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain like 17","termid":"PBO:0048077"}


id: PBO:0056396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPRE1 pseudogene 3","termid":"PBO:0056396"}


id: GO:0048297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of isotype switching to IgA isotypes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of isotype switching","termid":"GO:0045829"},{"relation_name":"is_a","term_name":"regulation of isotype switching to IgA isotypes","termid":"GO:0048296"},{"relation_name":"negatively_regulates","term_name":"isotype switching to IgA isotypes","termid":"GO:0048290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0006259","GO:0010467"],"is_obsolete":false,"name":"negative regulation of isotype switching to IgA isotypes","synonyms":[{"name":"down regulation of isotype switching to IgA isotypes","type":"exact"},{"name":"down-regulation of isotype switching to IgA isotypes","type":"exact"},{"name":"downregulation of isotype switching to IgA isotypes","type":"exact"},{"name":"inhibition of isotype switching to IgA isotypes","type":"narrow"},{"name":"negative regulation of class switch recombination to IgA isotypes","type":"exact"},{"name":"negative regulation of class switching to IgA isotypes","type":"exact"},{"name":"negative regulation of isotype switch recombination to IgA isotypes","type":"exact"}],"termid":"GO:0048297"}


id: PR:Q10231
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lanosterol synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00950","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lanosterol synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.01c","secondary_identifiers":["UniProtKB:Q10231"],"synonyms":[{"name":"2,3-epoxysqualene--lanosterol cyclase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"OSC (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-LSS","type":"exact"},{"name":"oxidosqualene--lanosterol cyclase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10231"}


id: PBO:0000666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen synthase kinase 3 (GSK-3) subfamily","termid":"PBO:0000666"}


id: PBO:0046007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 1 pseudogene 2","termid":"PBO:0046007"}


id: GO:0062119
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that associates with chromatin to form linear elements in fission yeast. In S. pombe, the LinE complex contains four main structural components (Rec10, Rec25, Rec27, and Mug20) and other associated proteins.","definition_xrefs":["PMID:30640914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"LinE complex","termid":"GO:0062119"}


id: PBO:0072912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SREBF chaperone","termid":"PBO:0072912"}


id: GO:0044635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of complement activation by the alternative pathway, in a different organism.","definition_xrefs":["PMID:20837040","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of complement activation, alternative pathway in another organism (obsolete GO:0044635)","synonyms":[{"name":"positive regulation of complement activation, alternative pathway in other organism","type":"exact"}],"termid":"GO:0044635"}


id: GO:0071074
data:
  {"annotated_genes":["SJAG_02390"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71419],"is_not":false,"summary":null,"term":"GO:0071074"}]},"cv_name":"molecular_function","definition":"Binding to eukaryotic initiation factor eIF2, a protein complex involved in the initiation of ribosome-mediated translation.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation initiation factor binding","termid":"GO:0031369"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02390":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"eukaryotic initiation factor eIF2 binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0071074","terms_by_termid":{"GO:0071074":null}}


id: PBO:0045473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DRG1 pseudogene 2","termid":"PBO:0045473"}


id: GO:0180005
data:
  {"annotated_genes":["SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111459],"is_not":false,"summary":null,"term":"GO:0180005"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: RNA polymerase II large subunit CTD heptapeptide repeat--phospho-L-threonine (consensus YSPTSPS)(position 4) + H2O = RNA polymerase II large subunit + phosphate.","definition_xrefs":["PMID:22622228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II CTD heptapeptide repeat phosphatase activity","termid":"GO:0008420"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03126":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016787","GO:0016788","GO:0004721","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat T4 phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA polymerase II C-terminal domain T4 phosphatase activity","type":"exact"}],"termid":"GO:0180005","terms_by_termid":{"GO:0180005":null}}


id: PBO:0051085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy constant gamma 3 (G3m marker)","termid":"PBO:0051085"}


id: PBO:0031483
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cellular_pigment_accumulation_phenotype","termid":"PBO:0031483"}


id: PBO:0073086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDHA pseudogene 2","termid":"PBO:0073086"}


id: PBO:0044942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DHDDS antisense RNA 1","termid":"PBO:0044942"}


id: GO:0008580
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoskeletal regulator activity (obsolete GO:0008580)","synonyms":[{"name":"cytoskeletal regulator activity","type":"exact"}],"termid":"GO:0008580"}


id: PBO:0003124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexitol dehydrogenase (predicted)","termid":"PBO:0003124"}


id: PBO:0057419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548u","termid":"PBO:0057419"}


id: PBO:0078908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 17-1","termid":"PBO:0078908"}


id: PBO:0000610
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.16","termid":"PBO:0000610"}


id: PBO:0083020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a protein; included in the original annotation of Chromosome I but later withdrawn","termid":"PBO:0083020"}


id: PBO:0113290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Predicted membrane protein required for lumenal ER protein retention; Golgi inorganic phosphate (Pi) exporter that balances Pi import associated with NDP-sugar transport into the Golgi; involved in recycling of early glycosyltransferases from late to early Golgi compartments; mutants secrete the endogenous ER protein, BiP (Kar2p)","termid":"PBO:0113290"}


id: MONDO:0019482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dendritic cell sarcoma not otherwise specified (obsolete MONDO:0019482)","termid":"MONDO:0019482","xrefs":{"Monarch":{"xref_id":"0019482"}}}


id: PBO:0039160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 5","termid":"PBO:0039160"}


id: GO:2000129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of octopamine signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of octopamine or tyramine signaling pathway","termid":"GO:2000126"},{"relation_name":"is_a","term_name":"regulation of octopamine signaling pathway","termid":"GO:2000128"},{"relation_name":"negatively_regulates","term_name":"octopamine signaling pathway","termid":"GO:0071927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of octopamine signaling pathway","synonyms":[{"name":"negative regulation of octopamine signalling pathway","type":"exact"}],"termid":"GO:2000129"}


id: FYPO:0007122
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of assembly of one or more mitochondrial respiratory chain complexes is decreased.","definition_xrefs":["PomBase:mah","PMID:31350787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased mitochondrial respiratory chain complex assembly","synonyms":[{"name":"decreased mitochondrial respiratory chain complex assembly during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial respiratory chain complex assembly during vegetative growth","type":"exact"},{"name":"decreased mitochondrial respiratory complex assembly","type":"exact"},{"name":"reduced mitochondrial respiratory chain complex assembly","type":"exact"}],"termid":"FYPO:0007122"}


id: GO:0044601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a nucleotide from a protein amino acid.","definition_xrefs":["GOC:sp","PMID:21734656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein denucleotidylation","termid":"GO:0044601"}


id: MONDO:1011575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuronal ceroid lipofuscinosis that occurs in mallard.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, non-human animal","termid":"MONDO:1011430"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, mallard","secondary_identifiers":["OMIA:000181-8839"],"termid":"MONDO:1011575","xrefs":{"Monarch":{"xref_id":"1011575"}}}


id: PBO:0066629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA sensor RIG-I","termid":"PBO:0066629"}


id: GO:0090341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of secretion of lysosomal enzymes, the controlled release of lysosomal enzymes by a cell.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein secretion","termid":"GO:0050709"},{"relation_name":"is_a","term_name":"regulation of secretion of lysosomal enzymes","termid":"GO:0090182"},{"relation_name":"negatively_regulates","term_name":"secretion of lysosomal enzymes","termid":"GO:0033299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of secretion of lysosomal enzymes","termid":"GO:0090341"}


id: PBO:0083602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; identified by homology","termid":"PBO:0083602"}


id: PBO:0054551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1951","termid":"PBO:0054551"}


id: GO:0044663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process of the specification, formation or maintenance of an alternative cell type, occurring as part of the process of phenotypic switching. Phenotypic switching begins with changes in cell morphology and altered gene expression patterns and ends when the morphology of a population of cells has reverted back to the default state, accompanied by altered expression patterns.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"part_of","term_name":"phenotypic switching","termid":"GO:0036166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment or maintenance of cell type involved in phenotypic switching","termid":"GO:0044663"}


id: PBO:0030095
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_rapamycin","termid":"PBO:0030095"}


id: PBO:0053481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 456","termid":"PBO:0053481"}


id: PBO:0057406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548i-3","termid":"PBO:0057406"}


id: PR:Q09787
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC13G6.09 gene.","definition_xrefs":["UniProtKB:Q09787","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G6.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.09","synonyms":[{"name":"Spom972h-SPAC13G6.09","type":"exact"}],"termid":"PR:Q09787"}


id: PBO:0074086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 3","termid":"PBO:0074086"}


id: GO:1900166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glial cell-derived neurotrophic factor production.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"glial cell-derived neurotrophic factor production","termid":"GO:0044467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of glial cell-derived neurotrophic factor production","synonyms":[{"name":"regulation of GDNF secretion","type":"narrow"},{"name":"regulation of glial cell line-derived neurotrophic factor secretion","type":"related"},{"name":"regulation of glial cell-derived neurotrophic factor secretion","type":"narrow"}],"termid":"GO:1900166"}


id: PBO:0040698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 apoptosis regulator","termid":"PBO:0040698"}


id: MONDO:0011434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"psoriasis, susceptibility to","termid":"MONDO:0100171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psoriasis 5, susceptibility to","secondary_identifiers":["DOID:0111282","OMIM:604316","UMLS:C1858536","MEDGEN:347660"],"synonyms":[{"name":"PSORS5","type":"exact"},{"name":"psoriasis 5, susceptibility to","type":"exact"},{"name":"psoriasis susceptibility 5","type":"exact"}],"termid":"MONDO:0011434","xrefs":{"Monarch":{"xref_id":"0011434"}}}


id: MONDO:0001430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal neovascularization","termid":"MONDO:0006713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"deep corneal vascularisation","secondary_identifiers":["SCTID:2102007","UMLS:C0155095","DOID:12087","ICD9:370.63","MEDGEN:509784"],"synonyms":[{"name":"deep vascularization of cornea","type":"exact"}],"termid":"MONDO:0001430","xrefs":{"Monarch":{"xref_id":"0001430"}}}


id: PBO:0060708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 5","termid":"PBO:0060708"}


id: MONDO:0009515
data:
  {"annotated_genes":["SJAG_03162"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84911],"is_not":false,"summary":null,"term":"MONDO:0009515"}]},"cv_name":"mondo","definition":"A form of lecithin-cholesterol acyltransferase deficiency (LCAT) characterized clinically by corneal opacities, hemolytic anemia, and renal failure, and biochemically by severely decreased HDL cholesterol and complete deficiency of the LCAT enzyme.","definition_xrefs":["Orphanet:79293"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hemolytic anemia","termid":"MONDO:0003664"},{"relation_name":"is_a","term_name":"hypolipoproteinemia","termid":"MONDO:0001822"},{"relation_name":"is_a","term_name":"LCAT deficiency","termid":"MONDO:0018999"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"Norum disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0023195","MEDGEN:9698","GARD:4011","NANDO:1200852","icd11.foundation:1848131619","DOID:1391","NCIT:C84813","OMIM:245900","SCTID:238091006"],"synonyms":[{"name":"FLD","type":"exact"},{"name":"LCAT deficiency","type":"related"},{"name":"Norum disease","type":"exact"},{"name":"complete LCAT deficiency","type":"exact"},{"name":"familial LCAT deficiency","type":"related"},{"name":"lecithin acyltransferase deficiency","type":"exact"},{"name":"lecithin:cholesterol acyltransferase deficiency","type":"exact"}],"termid":"MONDO:0009515","terms_by_termid":{"MONDO:0009515":null},"xrefs":{"Monarch":{"xref_id":"0009515"}}}


id: GO:0005813
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle.","definition_xrefs":["ISBN:0198547684","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule organizing center","termid":"GO:0005815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"centrosome","secondary_identifiers":["Wikipedia:Centrosome"],"termid":"GO:0005813"}


id: MOD:01619
data:
  {"annotated_genes":["SJAG_02388","SJAG_04238","SJAG_04067","SJAG_00254","SJAG_04953","SJAG_04125","SJAG_02827","SJAG_00288","SJAG_00109","SJAG_03032","SJAG_03290","SJAG_00096","SJAG_04789","SJAG_00784","SJAG_01970","SJAG_04553","SJAG_02435","SJAG_02260","SJAG_01029","SJAG_02504","SJAG_02489","SJAG_01626","SJAG_02694","SJAG_01162"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[80234,80242,80020,80041,80184,80200,80156,80197,80233,80040,80143,80021,80241,79981,80236,80000,80235,80155,80065,80137,79931,79948,80031,79983,80136,80013,80039,80006,80154,80240,80157,79940,79932,80134,79982,80196,79941,79984,80009,80228,80185,79969,80186,80198,79930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00689"}]},"cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two cysteine residues by formation of a chain of two or more bonded sulfur atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00096":null,"SJAG_00109":null,"SJAG_00254":null,"SJAG_00288":null,"SJAG_00784":null,"SJAG_01029":null,"SJAG_01162":null,"SJAG_01626":null,"SJAG_01970":null,"SJAG_02260":null,"SJAG_02388":null,"SJAG_02435":null,"SJAG_02489":null,"SJAG_02504":null,"SJAG_02694":null,"SJAG_02827":null,"SJAG_03032":null,"SJAG_03290":null,"SJAG_04067":null,"SJAG_04125":null,"SJAG_04238":null,"SJAG_04553":null,"SJAG_04789":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"multisulfide crosslinked residues","references_by_uniquename":{"PMID:36408920":null},"termid":"MOD:01619","terms_by_termid":{"MOD:00689":null}}


id: GO:0070672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-15 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-15","synonyms":[{"name":"response to IL-15","type":"exact"}],"termid":"GO:0070672"}


id: GO:0090145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the mitochondrial nucleoid that contributes to mitochondrial division.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial nucleoid organization involved in mitochondrial fission (obsolete GO:0090145)","synonyms":[{"name":"mitochondrial nucleoid organisation involved in mitochondrial fission","type":"exact"}],"termid":"GO:0090145"}


id: PBO:0073408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 11","termid":"PBO:0073408"}


id: PBO:0048663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol kinase 5","termid":"PBO:0048663"}


id: PR:P0CT70
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02975","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L2-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.13c","secondary_identifiers":["UniProtKB:P0CT70"],"synonyms":[{"name":"K37 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"K5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"KD4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RPL8","type":"exact"}],"termid":"PR:P0CT70"}


id: GO:1900348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methane biosynthetic process from methylamine.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"methane biosynthetic process from methylamine","termid":"GO:2001128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"regulation of methane biosynthetic process from methylamine","termid":"GO:1900348"}


id: FYPO:0000120
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the presence, distribution, or morphology of the mitotic or meiotic spindle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton","termid":"FYPO:0002399"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002399","FYPO:0000054","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal spindle","secondary_identifiers":["FYPO:0000367"],"synonyms":[{"name":"spindle defects","type":"exact"}],"termid":"FYPO:0000120"}


id: MONDO:0012866
data:
  {"annotated_genes":["SJAG_04913"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86529],"is_not":false,"summary":null,"term":"MONDO:0012866"}]},"cv_name":"mondo","definition":"Autosomal recessive spastic paraplegia type 35 is a rare form of hereditary spastic paraplegia characterized by childhood (exceptionally adolescent) onset of a complex phenotype presenting with lower limb (followed by upper limb) spasticity with hyperreflexia and extensor plantar responses, with additional manifestations including progressive dysarthria, dystonia, mild cognitive decline, extrapyramidal features, optic atrophy and seizures. White matter abnormalities and brain iron accumulation have also been observed on brain magnetic resonance imaging.","definition_xrefs":["Orphanet:171629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04913":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 35","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:764688002","GARD:10538","OMIM:612319","MEDGEN:501249","NANDO:1200541","DOID:0110786","MESH:C567311","UMLS:C3496228"],"synonyms":[{"name":"FA2H hereditary spastic paraplegia","type":"exact"},{"name":"SPG35","type":"exact"},{"name":"autosomal recessive spastic paraplegia 35","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 35","type":"exact"},{"name":"hereditary spastic paraplegia 35","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in FA2H","type":"exact"},{"name":"hereditary spastic paraplegia type 35","type":"exact"},{"name":"leukodystrophy, dysmyelinating and spastic paraparesis with or without dystonia","type":"exact"},{"name":"leukodystrophy, dysmyelinating, and spastic paraparesis with or without dystonia","type":"related"},{"name":"spastic paraplegia 35, autosomal recessive","type":"related"}],"termid":"MONDO:0012866","terms_by_termid":{"MONDO:0012866":null},"xrefs":{"Monarch":{"xref_id":"0012866"}}}


id: GO:0098018
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of the viral capsid that comprises the less common capsomere type. For example, in a T=3 icosahedral capsid, which is composed of 12 pentameric and 20 hexameric capsomeres, the pentameric capsomeres are minor subunits.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"capsomere","termid":"GO:0046727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral capsid, minor subunit","synonyms":[{"name":"minor capsomere","type":"exact"},{"name":"minor head protein","type":"related"}],"termid":"GO:0098018"}


id: GO:0043737
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage at apurinic or apyrimidinic sites to products with a 5'-phosphate.","definition_xrefs":["EC:3.1.21.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endodeoxyribonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0140097","GO:0016788"],"is_obsolete":false,"name":"deoxyribonuclease V activity","secondary_identifiers":["MetaCyc:3.1.21.7-RXN"],"synonyms":[{"name":"DNase V activity","type":"related"},{"name":"Escherichia coli endodeoxyribonuclease V activity","type":"narrow"},{"name":"endodeoxyribonuclease V","type":"exact"},{"name":"endonuclease V activity","type":"broad"}],"termid":"GO:0043737"}


id: PR:Q9C0Z9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase III subunit RPC9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR15561:SF0","PRO:DNx","OMA:SCHPO01381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit rpc9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.10","secondary_identifiers":["UniProtKB:Q9C0Z9"],"synonyms":[{"name":"RNA polymerase III subunit C17 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CRCP","type":"exact"}],"termid":"PR:Q9C0Z9"}


id: FYPO:0002008
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of aconitate hydratase (also known as aconitase) activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal aconitate hydratase activity","termid":"FYPO:0000920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"decreased aconitate hydratase activity","synonyms":[{"name":"decreased aconitase activity","type":"exact"},{"name":"reduced aconitate hydratase activity","type":"exact"}],"termid":"FYPO:0002008"}


id: GO:1905041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epithelium regeneration.","definition_xrefs":["GOC:rph","GOC:BHF_miRNA","PMID:23221517","GO_REF:0000058","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"epithelium regeneration","termid":"GO:1990399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelium regeneration","synonyms":[{"name":"regulation of regeneration of epithelium","type":"exact"}],"termid":"GO:1905041"}


id: PBO:0091399
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.2588021_2588022insA","termid":"PBO:0091399"}


id: PBO:0089678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex 3'-5'-exoribonuclease subunit 6","termid":"PBO:0089678"}


id: MOD:01959
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts three L-cysteine residues, an L-glutamic acid and a four-iron four-sulfur cluster to tris-L-cysteinyl L-glutamato tetrairon tetrasulfide.","definition_xrefs":["PubMed:21167158","RESID:AA0604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-glutamic acid residue","termid":"MOD:02068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"tris-L-cysteinyl L-glutamato tetrairon tetrasulfide","synonyms":[{"name":"tris-L-cysteinyl L-glutamato tetrairon tetrasulfide","type":"exact"},{"name":"tris-mu3-sulfido-tris(cysteinato)-1kappaS,2kappaS,3kappaS-glutamato-4kappaO(5),4kappaO(5')-tetrairon","type":"exact"}],"termid":"MOD:01959"}


id: PR:G2TRL2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wip1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRL2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone-fold domain-containing protein new1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.15","synonyms":[{"name":"Spom972h-wip1","type":"exact"}],"termid":"PR:G2TRL2"}


id: PBO:0060929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor of activated T cells 5","termid":"PBO:0060929"}


id: MONDO:0012322
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Holoprosencephaly associated with mutations in the ZIC2 gene.","definition_xrefs":["NCIT:C75460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microform holoprosencephaly","termid":"MONDO:0017219"},{"relation_name":"is_a","term_name":"lobar holoprosencephaly","termid":"MONDO:0019756"},{"relation_name":"is_a","term_name":"alobar holoprosencephaly","termid":"MONDO:0019757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"holoprosencephaly 5","secondary_identifiers":["UMLS:C1864827","DOID:0110878","MEDGEN:355304","OMIM:609637","MESH:C566464"],"synonyms":[{"name":"HPE5","type":"exact"},{"name":"ZIC2 holoprosencephaly","type":"exact"},{"name":"holoprosencephaly 5","type":"exact"},{"name":"holoprosencephaly caused by mutation in ZIC2","type":"exact"},{"name":"holoprosencephaly type 5","type":"exact"}],"termid":"MONDO:0012322","xrefs":{"Monarch":{"xref_id":"0012322"}}}


id: MONDO:0003077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinoblastoma restricted to local involvement.","definition_xrefs":["NCIT:C7846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoblastoma","termid":"MONDO:0008380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"intraocular retinoblastoma","secondary_identifiers":["MEDGEN:78874","UMLS:C0278717","DOID:4653"],"synonyms":[{"name":"intraocular retinoblastoma","type":"exact"}],"termid":"MONDO:0003077","xrefs":{"Monarch":{"xref_id":"0003077"}}}


id: MONDO:0030968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal recessive 76","secondary_identifiers":["DOID:0081235","MEDGEN:1808571","OMIM:619931","UMLS:C5677007"],"synonyms":[{"name":"MRT76","type":"exact"},{"name":"intellectual developmental disorder, autosomal recessive 76","type":"exact"},{"name":"mental retardation, autosomal recessive 76","type":"exact"}],"termid":"MONDO:0030968","xrefs":{"Monarch":{"xref_id":"0030968"}}}


id: MONDO:0007527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ehlers-Danlos syndromes (EDS) form a heterogeneous group of hereditary connective tissue diseases characterized by joint hyperlaxity, cutaneous hyperelasticity and tissue fragility.","definition_xrefs":["Orphanet:75392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, periodontitis type","secondary_identifiers":["UMLS:C0268347","GARD:12474","MEDGEN:82791","icd11.foundation:893527307","MESH:C562626","SCTID:50869007"],"synonyms":[{"name":"EDS 8","type":"related"},{"name":"EDS VIII","type":"exact"},{"name":"EDS VIII (formerly)","type":"related"},{"name":"EDS8","type":"related"},{"name":"EDS8 (formerly)","type":"related"},{"name":"Ehlers-Danlos syndrome type 8","type":"exact"},{"name":"Ehlers-Danlos syndrome type 8 (formerly)","type":"related"},{"name":"Ehlers-Danlos syndrome, periodontitis type","type":"exact"},{"name":"Ehlers-Danlos syndrome, periodontosis type","type":"related"},{"name":"Ehlers-Danlos syndrome, type 8","type":"related"},{"name":"Ehlers-Danlos syndrome, type VIII","type":"related"},{"name":"Ehlers-Danlos syndrome, type VIII (formerly)","type":"related"},{"name":"pEDS","type":"related"},{"name":"periodontal EDS","type":"related"},{"name":"periodontal Ehlers-Danlos syndrome","type":"related"}],"termid":"MONDO:0007527","xrefs":{"Monarch":{"xref_id":"0007527"}}}


id: PBO:0090383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type ATPase P5 type","termid":"PBO:0090383"}


id: PBO:0053315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 29","termid":"PBO:0053315"}


id: MONDO:0004732
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma in situ involving a kidney.","definition_xrefs":["MONDO:patterns/carcinoma_in_situ"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in situ carcinoma","termid":"MONDO:0004647"},{"relation_name":"is_a","term_name":"renal carcinoma","termid":"MONDO:0005206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"kidney carcinoma in situ","secondary_identifiers":["SCTID:92624000","DOID:9234","UMLS:C0686172","MEDGEN:673070","ICD9:233.9"],"synonyms":[{"name":"carcinoma in situ of kidney","type":"exact"},{"name":"kidney in situ carcinoma","type":"exact"},{"name":"stage 0 kidney carcinoma","type":"exact"}],"termid":"MONDO:0004732","xrefs":{"Monarch":{"xref_id":"0004732"}}}


id: MONDO:0023540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kashani-Strom-Utley syndrome","secondary_identifiers":["UMLS:C2931392","Orphanet:1137","MESH:C537010","MEDGEN:419069"],"synonyms":[{"name":"Kashani Strom Utley syndrome","type":"related"},{"name":"hypoplastic pulmonary arteries and aorta with obstructive uropathy","type":"related"},{"name":"pulmonary aortic stenosis obstructive uropathy","type":"related"}],"termid":"MONDO:0023540","xrefs":{"Monarch":{"xref_id":"0023540"}}}


id: PR:O74905
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl902 gene.","definition_xrefs":["UniProtKB:O74905","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L9-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC613.06","synonyms":[{"name":"Spom972h-rpl902","type":"exact"}],"termid":"PR:O74905"}


id: GO:1904449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of aspartate secretion.","definition_xrefs":["GO_REF:0000058","PMID:2342602","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"is_a","term_name":"negative regulation of secretion by cell","termid":"GO:1903531"},{"relation_name":"is_a","term_name":"regulation of aspartate secretion","termid":"GO:1904448"},{"relation_name":"negatively_regulates","term_name":"aspartate secretion","termid":"GO:0061528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of aspartate secretion","synonyms":[{"name":"down regulation of aspartate secretion","type":"exact"},{"name":"down-regulation of aspartate secretion","type":"exact"},{"name":"downregulation of aspartate secretion","type":"exact"},{"name":"inhibition of aspartate secretion","type":"narrow"}],"termid":"GO:1904449"}


id: GO:2000438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of monocyte extravasation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular extravasation","termid":"GO:0002692"},{"relation_name":"is_a","term_name":"negative regulation of mononuclear cell migration","termid":"GO:0071676"},{"relation_name":"is_a","term_name":"regulation of monocyte extravasation","termid":"GO:2000437"},{"relation_name":"negatively_regulates","term_name":"monocyte extravasation","termid":"GO:0035696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of monocyte extravasation","termid":"GO:2000438"}


id: GO:0141083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts the host signal transduction pathways leading to the production of reactive oxygen species as part of the host innate immune response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:27473656","PMID:31375544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host defense response","termid":"GO:0052031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host reactive oxygen species generation","synonyms":[{"name":"inhibition by organism of defense-related host active oxygen species production","type":"exact"}],"termid":"GO:0141083"}


id: PBO:0068207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 514","termid":"PBO:0068207"}


id: MONDO:0100244
data:
  {"annotated_genes":["SJAG_00846","SJAG_04881"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010438"},{"annotations":[85450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014166"}]},"cv_name":"mondo","definition":"Paroxysmal nocturnal hemoglobinuria (PNH) is an acquired clonal hematopoietic stem cell disorder characterized by corpuscular hemolytic anemia, bone marrow failure and frequent thrombotic events.","definition_xrefs":["Orphanet:447"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inborn disorder of glycosphingolipid and glycosylphosphatidylinositol anchor glycosylation","termid":"MONDO:0017748"},{"relation_name":"is_a","term_name":"hemoglobinuria","termid":"MONDO:0003656"},{"relation_name":"is_a","term_name":"hemolytic anemia","termid":"MONDO:0003664"},{"relation_name":"is_a","term_name":"acquired metabolic disease","termid":"MONDO:0006504"},{"relation_name":"is_a","term_name":"acquired aplastic anemia","termid":"MONDO:0015610"},{"relation_name":"is_a","term_name":"disorder of GPI anchor biosynthesis","termid":"MONDO:0024321"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00846":null,"SJAG_04881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005570","MONDO:0005240","MONDO:0002280","MONDO:0005066"],"is_obsolete":false,"name":"paroxysmal nocturnal hemoglobinuria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060284","MedDRA:10034042","HGNC:8957","NCIT:C61233","GARD:7337","NORD:1557","OMIMPS:300818","SCTID:127057004","HP:0004818","SCTID:1963002","UMLS:C0024790","MEDGEN:7471","icd11.foundation:859588467"],"synonyms":[{"name":"Marchiafava-Micheli disease","type":"exact"},{"name":"PNH","type":"exact"},{"name":"acquired paroxysmal nocturnal hemoglobinuria","type":"exact"},{"name":"hereditary paroxysmal nocturnal hemoglobinuria","type":"exact"},{"name":"inherited paroxysmal nocturnal hemoglobinuria","type":"exact"},{"name":"paroxysmal hemoglobinuria","type":"exact"}],"termid":"MONDO:0100244","terms_by_termid":{"MONDO:0010438":null,"MONDO:0014166":null},"xrefs":{"Monarch":{"xref_id":"0100244"}}}


id: PBO:0044567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in azoospermia like","termid":"PBO:0044567"}


id: PBO:0077036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THOC3 antisense RNA 1","termid":"PBO:0077036"}


id: SO:0000122
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A folded RNA sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_secondary_structure","termid":"SO:0000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_sequence_secondary_structure","synonyms":[{"name":"RNA sequence secondary structure","type":"exact"}],"termid":"SO:0000122"}


id: GO:0016911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete SAP kinase 4 activity (obsolete GO:0016911)","synonyms":[{"name":"SAP kinase 4 activity","type":"exact"},{"name":"SAPK4","type":"exact"}],"termid":"GO:0016911"}


id: GO:0007450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the dorsal/ventral axis of the imaginal disc. Imaginal disks are masses of hypodermic cells, carried by the larvae of some insects after leaving the egg, from which masses the wings and legs of the adult are subsequently formed.","definition_xrefs":["GOC:jid","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc pattern formation","termid":"GO:0007447"},{"relation_name":"is_a","term_name":"dorsal/ventral pattern formation","termid":"GO:0009953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal/ventral pattern formation, imaginal disc","synonyms":[{"name":"dorsal-ventral pattern formation, imaginal disc","type":"exact"},{"name":"dorsoventral pattern formation, imaginal disc","type":"exact"}],"termid":"GO:0007450"}


id: MONDO:0007055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare bone dysplasia characterized by short stature, short hands and feet, mild facial dysmorphism, and characteristic X-ray abnormalities of the hands.","definition_xrefs":["Orphanet:969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acromelic dysplasia","termid":"MONDO:0019695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acromicric dysplasia","secondary_identifiers":["GARD:7","OMIM:102370","SCTID:254090007","UMLS:C0265287","DOID:0111243","ICD9:756.59","MEDGEN:78549","MESH:C535662","NORD:725","icd11.foundation:1006372687"],"synonyms":[{"name":"ACMICD","type":"related"},{"name":"Acromicric dysplasia","type":"exact"},{"name":"Acromicric skeletal dysplasia","type":"related"}],"termid":"MONDO:0007055","xrefs":{"Monarch":{"xref_id":"0007055"}}}


id: RO:0002630
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Process(P1) directly negatively regulates process(P2) iff: P1 negatively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2).  For example, if protein A has protein binding activity(P1) that targets protein B and this binding  negatively regulates the kinase activity (P2) of protein B then P1 directly negatively regulates P2.","direct_ancestors":[{"relation_name":"is_a","term_name":"negatively_regulates","termid":"RO:0002212"},{"relation_name":"is_a","term_name":"directly_regulates","termid":"RO:0002578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_negatively_regulates","termid":"RO:0002630"}


id: PBO:0066345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of chromosome condensation 2 pseudogene 7","termid":"PBO:0066345"}


id: PBO:0048716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLR5 pseudogene 2","termid":"PBO:0048716"}


id: GO:0097668
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Saf1 in S. cerevisiae (Pof9 in S. pombe).","definition_xrefs":["PMID:11283612","GOC:vw","GOC:jd","PMID:15147268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SCF-Saf1/Pof9 ubiquitin ligase complex","termid":"GO:0097668"}


id: PBO:0063451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 9A","termid":"PBO:0063451"}


id: PBO:0038292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interaction_rescued_phenotype_id","termid":"PBO:0038292"}


id: PBO:0056725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix extracellular phosphoglycoprotein","termid":"PBO:0056725"}


id: PBO:0070268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 2A","termid":"PBO:0070268"}


id: PBO:0031362
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_K-252a","termid":"PBO:0031362"}


id: GO:0061679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The Entner-Doudoroff pathway that proceeds through a D-gluconate intermediate.","definition_xrefs":["GOC:dph","PMID:12921536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Entner-Doudoroff pathway","termid":"GO:0061678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"Entner-Doudoroff pathway through gluconate","synonyms":[{"name":"gluconate pathway","type":"related"}],"termid":"GO:0061679"}


id: GO:0102347
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: icosanoyl-CoA(4-) + NADP(3-) = trans-2-icosenoyl-CoA(4-) + NADPH(4-) + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-arachidon-2-enoyl-CoA reductase activity (obsolete GO:0102347)","termid":"GO:0102347"}


id: GO:0035838
data:
  {"annotated_genes":["SJAG_03011","SJAG_02916","SJAG_05285","SJAG_00661","SJAG_04566","SJAG_02104","SJAG_04058","SJAG_01754","SJAG_03915","SJAG_04666","SJAG_04509","SJAG_02320","SJAG_01925","SJAG_00152","SJAG_00030","SJAG_03126","SJAG_03748","SJAG_04358","SJAG_03705","SJAG_04960","SJAG_03119","SJAG_03637","SJAG_01189","SJAG_04901","SJAG_02278","SJAG_00424","SJAG_01388","SJAG_02222","SJAG_02838","SJAG_02338","SJAG_04703","SJAG_01290","SJAG_04765","SJAG_01196","SJAG_00514","SJAG_03625","SJAG_04624","SJAG_02511","SJAG_03581","SJAG_02169","SJAG_02166","SJAG_03486"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87940,90768,91896,93356,94418,94897,96351,99259,99665,103373,111655,113533,114962,116057,118866,118868,118870,118872,118874,118876],"is_not":false,"summary":null,"term":"GO:0035838"},{"annotations":[115302,112537,117398,90192,115973,90221,91891,111434,87352,110241,94054,89328,118126,118324,105583,113644,115665,96685],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902716"},{"annotations":[96356,113869,98820,110248,115311,88908,112265,91066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035841"},{"annotations":[110250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035842"},{"annotations":[88236,105590,113870,96357,102563,104143,88910,112267,113537,98821,91067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035840"},{"annotations":[99147],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902929"}]},"cv_name":"cellular_component","definition":"The region at either end of the longest axis of a cylindrical or elongated cell, where polarized growth occurs.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site of polarized growth","termid":"GO:0030427"},{"relation_name":"is_a","term_name":"cell tip","termid":"GO:0051286"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00152":null,"SJAG_00424":null,"SJAG_00514":null,"SJAG_00661":null,"SJAG_01189":null,"SJAG_01196":null,"SJAG_01290":null,"SJAG_01388":null,"SJAG_01754":null,"SJAG_01925":null,"SJAG_02104":null,"SJAG_02166":null,"SJAG_02169":null,"SJAG_02222":null,"SJAG_02278":null,"SJAG_02320":null,"SJAG_02338":null,"SJAG_02511":null,"SJAG_02838":null,"SJAG_02916":null,"SJAG_03011":null,"SJAG_03119":null,"SJAG_03126":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03625":null,"SJAG_03637":null,"SJAG_03705":null,"SJAG_03748":null,"SJAG_03915":null,"SJAG_04058":null,"SJAG_04358":null,"SJAG_04509":null,"SJAG_04566":null,"SJAG_04624":null,"SJAG_04666":null,"SJAG_04703":null,"SJAG_04765":null,"SJAG_04901":null,"SJAG_04960":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"growing cell tip","references_by_uniquename":{"GO_REF:0000107":null,"PMID:30726171":null},"synonyms":[{"name":"growing cell end","type":"exact"}],"termid":"GO:0035838","terms_by_termid":{"GO:0035838":null,"GO:0035840":null,"GO:0035841":null,"GO:0035842":null,"GO:1902716":null,"GO:1902929":null}}


id: PBO:0004004
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.15","termid":"PBO:0004004"}


id: GO:0044691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The tooth development process in which the teeth enter the mouth and become visible.","definition_xrefs":["Wikipedia:Tooth_eruption"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"odontogenesis","termid":"GO:0042476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tooth eruption","termid":"GO:0044691"}


id: PBO:0065717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prader Willi/Angelman region RNA 1","termid":"PBO:0065717"}


id: MONDO:0010052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any azoospermia in which the cause of the disease is a mutation in the SYCP3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 4","secondary_identifiers":["OMIM:270960","MESH:C536875","UMLS:C0232981","GARD:15235","DOID:0070176","MEDGEN:68568"],"synonyms":[{"name":"SPGF4","type":"related"},{"name":"SYCP3 azoospermia","type":"exact"},{"name":"arrest of spermatogenesis","type":"related"},{"name":"azoospermia caused by mutation in SYCP3","type":"exact"},{"name":"azoospermia due to Perturbations of meiosis","type":"related"},{"name":"azoospermia with maturation arrest","type":"related"},{"name":"pregnancy loss, recurrent, 4","type":"related"},{"name":"pregnancy loss, recurrent, susceptibility to, 4","type":"related"},{"name":"spermatogenesis arrest","type":"related"},{"name":"spermatogenic failure 4","type":"exact"},{"name":"spermatogenic failure type 4","type":"exact"}],"termid":"MONDO:0010052","xrefs":{"Monarch":{"xref_id":"0010052"}}}


id: MONDO:0020449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of the inferior vena cava","termid":"MONDO:0019830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent eustachian valve","secondary_identifiers":["MEDGEN:1678657","GARD:19661","Orphanet:99120","UMLS:C5190784"],"termid":"MONDO:0020449","xrefs":{"Monarch":{"xref_id":"0020449"}}}


id: GO:1900733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of polyketide biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of polyketide biosynthetic process","termid":"GO:1900732"},{"relation_name":"negatively_regulates","term_name":"polyketide biosynthetic process","termid":"GO:0030639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of polyketide biosynthetic process","synonyms":[{"name":"down regulation of polyketide anabolism","type":"exact"},{"name":"down regulation of polyketide biosynthesis","type":"exact"},{"name":"down regulation of polyketide biosynthetic process","type":"exact"},{"name":"down regulation of polyketide formation","type":"exact"},{"name":"down regulation of polyketide synthesis","type":"exact"},{"name":"down-regulation of polyketide anabolism","type":"exact"},{"name":"down-regulation of polyketide biosynthesis","type":"exact"},{"name":"down-regulation of polyketide biosynthetic process","type":"exact"},{"name":"down-regulation of polyketide formation","type":"exact"},{"name":"down-regulation of polyketide synthesis","type":"exact"},{"name":"downregulation of polyketide anabolism","type":"exact"},{"name":"downregulation of polyketide biosynthesis","type":"exact"},{"name":"downregulation of polyketide biosynthetic process","type":"exact"},{"name":"downregulation of polyketide formation","type":"exact"},{"name":"downregulation of polyketide synthesis","type":"exact"},{"name":"inhibition of polyketide anabolism","type":"exact"},{"name":"inhibition of polyketide biosynthesis","type":"exact"},{"name":"inhibition of polyketide biosynthetic process","type":"narrow"},{"name":"inhibition of polyketide formation","type":"exact"},{"name":"inhibition of polyketide synthesis","type":"exact"},{"name":"negative regulation of polyketide anabolism","type":"exact"},{"name":"negative regulation of polyketide biosynthesis","type":"exact"},{"name":"negative regulation of polyketide formation","type":"exact"},{"name":"negative regulation of polyketide synthesis","type":"exact"}],"termid":"GO:1900733"}


id: PBO:0014614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense RNA complementary to adh1, major transcript","termid":"PBO:0014614"}


id: GO:0000104
data:
  {"annotated_genes":["SJAG_00203","SJAG_01671","SJAG_00260"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016156"},{"annotations":[88665,88297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008177"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: succinate + acceptor = fumarate + reduced acceptor.","definition_xrefs":["RHEA:16357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00203":null,"SJAG_00260":null,"SJAG_01671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"succinate dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0019739","KEGG_REACTION:R00412"],"synonyms":[{"name":"fumarate dehydrogenase activity","type":"exact"},{"name":"fumarate reductase activity","type":"exact"},{"name":"fumaric hydrogenase activity","type":"related"},{"name":"succinate oxidoreductase activity","type":"exact"},{"name":"succinic acid dehydrogenase activity","type":"exact"},{"name":"succinic dehydrogenase activity","type":"broad"},{"name":"succinodehydrogenase activity","type":"exact"},{"name":"succinyl dehydrogenase activity","type":"exact"}],"termid":"GO:0000104","terms_by_termid":{"GO:0008177":null,"GO:0016156":null}}


id: PBO:0035950
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_centromeric_chromatin_during_mitotic_G1_phase","termid":"PBO:0035950"}


id: PBO:0063925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoinositide-3-kinase regulatory subunit 4","termid":"PBO:0063925"}


id: PBO:0005715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR85 family, implicated in rRNA transcription","termid":"PBO:0005715"}


id: PR:G2TRQ2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tam8 gene.","definition_xrefs":["UniProtKB:G2TRQ2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein tam8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.18","synonyms":[{"name":"Spom972h-tam8","type":"exact"},{"name":"transcripts altered in meiosis protein 8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRQ2"}


id: MONDO:0012015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nystagmus","termid":"MONDO:0005712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"nystagmus 3, congenital, autosomal dominant","secondary_identifiers":["OMIM:608345","DOID:0111793","MEDGEN:374873","MESH:C537855","UMLS:C1842186"],"synonyms":[{"name":"NYS3","type":"exact"},{"name":"NYSTAGMUS 3, congenital, autosomal dominant","type":"related"}],"termid":"MONDO:0012015","xrefs":{"Monarch":{"xref_id":"0012015"}}}


id: PBO:0091027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS complex Rab GEF subunit Vam6","termid":"PBO:0091027"}


id: PBO:0029700
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_nucleoside_diphosphate_kinase_activity","termid":"PBO:0029700"}


id: PBO:0054890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2304","termid":"PBO:0054890"}


id: MOD:02004
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydroxy hydrogen atom of L-threonine with an acyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O3-acylated L-threonine","termid":"MOD:02004"}


id: PBO:0029084
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_terbinafine","termid":"PBO:0029084"}


id: PBO:0033782
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_site-specific_DNA_replication_termination_at_RTS1_barrier","termid":"PBO:0033782"}


id: MONDO:0000845
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic, non-inheritable disorder caused by osteoblastic differentiation defects that result in the replacement of bone marrow and trabecular bone by fibrous stroma and immature bone. It usually affects a single bone and less frequently multiple bones. Skull, femur, tibia, and humerus are the most frequently affected bones. It manifests with pain, deformities, and fractures.","definition_xrefs":["NCIT:C34609"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"bone remodeling disease","termid":"MONDO:0000833"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrous dysplasia","secondary_identifiers":["DOID:0080031","MEDGEN:120444","icd11.foundation:1704766818","Orphanet:249","MESH:D005357","SCTID:10623005","GARD:6444","SCTID:254145001","ICD9:733.29","NORD:1147","UMLS:C0259779","MedDRA:10016664"],"synonyms":[{"name":"fibrous dysplasia of bone","type":"exact"}],"termid":"MONDO:0000845","xrefs":{"Monarch":{"xref_id":"0000845"}}}


id: MONDO:0007774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abnormal response to a stimulus applied to the sensory components of the nervous system. This may take the form of increased, decreased, or absent reflexes.","definition_xrefs":["MESH:D012021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperreflexia","secondary_identifiers":["MEDGEN:57738","UMLS:C0151889","OMIM:145290","HP:0001347","icd11.foundation:514864448"],"synonyms":[{"name":"HRX","type":"related"},{"name":"hyperreflexia","type":"exact"},{"name":"hyperreflexia (disease)","type":"exact"}],"termid":"MONDO:0007774","xrefs":{"Monarch":{"xref_id":"0007774"}}}


id: FYPO:0001664
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of cyclic AMP measured in a cell is higher than normal during a cellular response to glucose stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular cAMP level","termid":"FYPO:0001661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular cAMP level during cellular response to glucose stimulus","synonyms":[{"name":"increased cAMP accumulation during cellular response to glucose stimulus","type":"related"},{"name":"increased cellular cAMP level in response to glucose stimulus","type":"exact"},{"name":"increased cellular cyclic AMP level during cellular response to glucose stimulus","type":"exact"}],"termid":"FYPO:0001664"}


id: PBO:0067145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 193, pseudogene","termid":"PBO:0067145"}


id: PBO:0038385
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_parasitoid","termid":"PBO:0038385"}


id: GO:0110075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ferroptosis.","definition_xrefs":["PMID:24439385","PMID:29290465","GOC:sp","PMID:25402683"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"regulates","term_name":"ferroptosis","termid":"GO:0097707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ferroptosis","termid":"GO:0110075"}


id: SO:0002178
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An SNV that is the result of base-calling or assembly error.","direct_ancestors":[{"relation_name":"is_a","term_name":"substitution_artifact","termid":"SO:0002176"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNV_artifact","synonyms":[{"name":"SNV artifact","type":"exact"}],"termid":"SO:0002178"}


id: PR:O43019
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sre2 gene.","definition_xrefs":["UniProtKB:O43019","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor sre2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.05c","synonyms":[{"name":"Spom972h-sre2","type":"exact"},{"name":"sterol regulatory element-binding protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43019"}


id: GO:0019098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific behavior of an organism that is associated with reproduction.","definition_xrefs":["GOC:jl","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"},{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reproductive behavior","secondary_identifiers":["GO:0033057","GO:0044704","GO:0044705"],"synonyms":[{"name":"multi-organism reproductive behavior","type":"narrow"},{"name":"multicellular organism reproductive behavior","type":"narrow"},{"name":"reproductive behavior in a multicellular organism","type":"exact"},{"name":"reproductive behaviour","type":"exact"},{"name":"single-organism reproductive behavior","type":"related"}],"termid":"GO:0019098"}


id: GO:0097654
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that is capable of fusing intracellular vesicles to the plasma membrane of platelets for exocytosis of alpha-granules or dense granules. Contains isoforms of VAMP, SNAP and syntaxin proteins. Ternary SNARE complexes interact in a circular array to form ring complexes or channels around the membrane fusion. A common composition in human is VAMP-8, SNAP-23 and syntaxin-2 or -4.","definition_xrefs":["GOC:bhm","PMID:12130530","PMID:19450911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"platelet SNARE complex","termid":"GO:0097654"}


id: GO:2000946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of amylopectin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of starch catabolic process","termid":"GO:2000882"},{"relation_name":"is_a","term_name":"negative regulation of amylopectin metabolic process","termid":"GO:2000943"},{"relation_name":"is_a","term_name":"regulation of amylopectin catabolic process","termid":"GO:2000945"},{"relation_name":"negatively_regulates","term_name":"amylopectin catabolic process","termid":"GO:2000897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of amylopectin catabolic process","synonyms":[{"name":"negative regulation of Amylopectin catabolism","type":"exact"}],"termid":"GO:2000946"}


id: FYPO:0007825
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to amino acid starvation is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PMID:33534698","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein level during cellular response to amino acid starvation","synonyms":[{"name":"decreased protein accumulation during cellular response to amino acid starvation","type":"related"},{"name":"decreased protein level during cellular response to amino acid starvation during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to amino acid starvation during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to amino acid starvation","type":"exact"}],"termid":"FYPO:0007825"}


id: PBO:0070127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 41 pseudogene","termid":"PBO:0070127"}


id: GO:0010819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of T cell chemotaxis. T cell chemotaxis is the directed movement of a T cell in response to an external stimulus.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte chemotaxis","termid":"GO:1901623"},{"relation_name":"is_a","term_name":"regulation of T cell migration","termid":"GO:2000404"},{"relation_name":"regulates","term_name":"T cell chemotaxis","termid":"GO:0010818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell chemotaxis","termid":"GO:0010819"}


id: MONDO:0032773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"uridine-cytidineuria","secondary_identifiers":["OMIM:618477","UMLS:C4760647","MEDGEN:1681582"],"synonyms":[{"name":"URCTU","type":"related"},{"name":"URIDINE-CYTIDINEURIA","type":"related"},{"name":"uridine-cytidineuria","type":"exact"}],"termid":"MONDO:0032773","xrefs":{"Monarch":{"xref_id":"0032773"}}}


id: GO:0097519
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex consisting of a higher-order oligomer of strand exchange proteins (recombinases) on single-stranded DNA.","definition_xrefs":["GOC:cjm","PMID:10357855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DNA recombinase complex","termid":"GO:0097519"}


id: PBO:0053501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 484","termid":"PBO:0053501"}


id: PBO:0068041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 346","termid":"PBO:0068041"}


id: PBO:0065903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB44, member RAS oncogene family","termid":"PBO:0065903"}


id: PBO:0042070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 138","termid":"PBO:0042070"}


id: PBO:0053572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 592","termid":"PBO:0053572"}


id: GO:0006124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ferredoxin, any simple, nonenzymatic iron-sulfur protein that is characterized by having equal numbers of atoms of iron and labile sulfur. Iron and sulfur atoms are present in one or two clusters of two or four atoms of each.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ferredoxin metabolic process","secondary_identifiers":["Reactome:R-HSA-2395516"],"synonyms":[{"name":"ferredoxin metabolism","type":"exact"}],"termid":"GO:0006124"}


id: PBO:0051920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit beta 3 binding protein","termid":"PBO:0051920"}


id: SO:0001933
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A terminal region of DNA sequence where the end of the region is not blunt ended and the exposed single strand terminates at the 3' end.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restriction_enzyme_single_strand_overhang","termid":"SO:0001695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restriction_enzyme_three_prime_single_strand_overhang","synonyms":[{"name":"restriction enzyme three prime single strand overhang","type":"exact"}],"termid":"SO:0001933"}


id: PBO:0080115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UVRAG divergent transcript","termid":"PBO:0080115"}


id: PBO:0003082
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.2.1.28","termid":"PBO:0003082"}


id: MONDO:0006903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paralysis of the nerves located in the legs.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral nervous system disorder","termid":"MONDO:0003620"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroneal nerve paralysis","secondary_identifiers":["EFO:1001102","UMLS:C0270810","MedDRA:10033828","MESH:D020427","MEDGEN:78733","SCTID:399088004","DOID:6925","NCIT:C27061"],"synonyms":[{"name":"nerve palsy, peroneal","type":"exact"},{"name":"palsy, peroneal nerve","type":"exact"},{"name":"peroneal nerve palsy","type":"exact"}],"termid":"MONDO:0006903","xrefs":{"Monarch":{"xref_id":"0006903"}}}


id: MONDO:0022859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital anatomic anomaly in which the heart has only two chambers.","definition_xrefs":["NCIT:C124591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cor biloculare","secondary_identifiers":["UMLS:C0152238","MEDGEN:56271","ICD9:745.7","SCTID:81990004"],"synonyms":[{"name":"Cor Biloculare","type":"exact"},{"name":"TWO-chambered heart","type":"exact"},{"name":"absence of atrial and ventricular septa","type":"related"},{"name":"cor biloculare","type":"exact"}],"termid":"MONDO:0022859","xrefs":{"Monarch":{"xref_id":"0022859"}}}


id: PBO:0001443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (uridine) methyltransferase Trm9 (predicted)","termid":"PBO:0001443"}


id: FYPO:0001074
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of myo-inositol into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal myo-inositol import","termid":"FYPO:0001073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased myo-inositol import","synonyms":[{"name":"decreased myo-inositol import across plasma membrane","type":"exact"},{"name":"decreased myo-inositol import during mitotic cell cycle","type":"related"},{"name":"decreased myo-inositol import during vegetative growth","type":"exact"},{"name":"decreased myo-inositol import into cell","type":"exact"},{"name":"decreased myo-inositol uptake","type":"exact"},{"name":"reduced myo-inositol import","type":"exact"}],"termid":"FYPO:0001074"}


id: MONDO:1012022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spontaneous autoimmune thyroiditis, non-human animal","termid":"MONDO:1011673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spontaneous autoimmune thyroiditis, domestic cat","secondary_identifiers":["OMIA:000097-9685"],"termid":"MONDO:1012022","xrefs":{"Monarch":{"xref_id":"1012022"}}}


id: PBO:0054138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1504","termid":"PBO:0054138"}


id: GO:0072313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a metanephric glomerular epithelial cell over time, from its formation to the mature structure. Metanephric glomerular epithelial cells are specialized epithelial cells that form part of the metanephric glomerulus; there are two types, metanephric glomerular parietal epithelial cells and metanephric glomerular visceral epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular epithelial cell development","termid":"GO:0072310"},{"relation_name":"part_of","term_name":"metanephric glomerular epithelial cell differentiation","termid":"GO:0072312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular epithelial cell development","termid":"GO:0072313"}


id: PBO:0003922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit Aim27 (predicted)","termid":"PBO:0003922"}


id: GO:0060284
data:
  {"annotated_genes":["SJAG_04140","SJAG_02169","SJAG_04853","SJAG_00993","SJAG_00514","SJAG_02392","SJAG_03581"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95334,89340,94063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[110690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[90207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"},{"annotations":[101792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[90209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"},{"annotations":[91673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034307"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"cell development","termid":"GO:0048468"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_00993":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_03581":null,"SJAG_04140":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell development","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0060284","terms_by_termid":{"GO:0034307":null,"GO:0051517":null,"GO:0051519":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: MONDO:0042717
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Saul-Wilkes-Stevenson syndrome","secondary_identifiers":["MESH:C536617","MEDGEN:419372","UMLS:C2931266"],"synonyms":[{"name":"Saul Wilkes Stevenson syndrome","type":"related"}],"termid":"MONDO:0042717","xrefs":{"Monarch":{"xref_id":"0042717"}}}


id: MONDO:0002234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-infectious or infectious inflammatory process affecting the vagina.","definition_xrefs":["NCIT:C26911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginal disorder","termid":"MONDO:0001433"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaginitis","secondary_identifiers":["DOID:2170","icd11.foundation:290861382","HP:0030683","MESH:D014627","MEDGEN:21815","SCTID:30800001","ICD9:616.10","UMLS:C0042267","ICD9:616.1"],"synonyms":[{"name":"inflammation of vagina","type":"exact"},{"name":"vagina inflammation","type":"exact"},{"name":"vaginal Inflammation","type":"exact"},{"name":"vaginal inflammation","type":"exact"},{"name":"vaginitis","type":"exact"},{"name":"vaginitis (disease)","type":"exact"}],"termid":"MONDO:0002234","xrefs":{"Monarch":{"xref_id":"0002234"}}}


id: GO:0030978
data:
  {"annotated_genes":["SJAG_04236","SJAG_00610","SJAG_03057","SJAG_04184","SJAG_02278","SJAG_04666","SJAG_00424","SJAG_02916","SJAG_01028"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030979"},{"annotations":[117291,103673,113874,88622,108562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[94422,91910,88916,102348],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving alpha-glucans, compounds composed of glucose residues linked by alpha-D-glucosidic bonds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01028":null,"SJAG_02278":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"alpha-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"alpha-glucan metabolism","type":"exact"}],"termid":"GO:0030978","terms_by_termid":{"GO:0030979":null,"GO:0070600":null,"GO:0070610":null}}


id: MONDO:0858950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A brain disease that is characterized by brain dysfunction caused by an outside force, usually a violent blow to the head.","definition_xrefs":["DOID:0081292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain injury","termid":"MONDO:0043510"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"traumatic brain injury","termid":"MONDO:0858950","xrefs":{"Monarch":{"xref_id":"0858950"}}}


id: PBO:0052008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctional cadherin complex regulator","termid":"PBO:0052008"}


id: PBO:0089309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-mannosidase GH125 family Mug157","termid":"PBO:0089309"}


id: PBO:0059992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 12","termid":"PBO:0059992"}


id: FYPO:0001604
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the cytosol differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"altered level of substance in cytosol","synonyms":[{"name":"abnormal cytosolic level of substance","type":"exact"},{"name":"abnormal level of substance in cytosol","type":"exact"},{"name":"abnormal level of substance in cytosol during vegetative growth","type":"exact"},{"name":"altered cytosolic level of substance","type":"exact"},{"name":"altered level of substance in cytosol during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001604"}


id: PBO:0084696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial external NADH dehydrogenase; catalyzes the oxidation of cytosolic NADH; Nde1p and Nde2p are involved in providing the cytosolic NADH to the mitochondrial respiratory chain; NDE2 has a paralog, NDE1, that arose from the whole genome duplication","termid":"PBO:0084696"}


id: PBO:0090727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SBDS family ribosome assembly protein Sdo1","termid":"PBO:0090727"}


id: GO:0141137
data:
  {"annotated_genes":["SJAG_01653","SJAG_01513","SJAG_04097","SJAG_00896","SJAG_03944","SJAG_04596","SJAG_04005","SJAG_01804","SJAG_00045","SJAG_03576","SJAG_00441","SJAG_02549","SJAG_01622","SJAG_02170","SJAG_00184","SJAG_03839","SJAG_01110","SJAG_04038","SJAG_03787","SJAG_04194","SJAG_05313","SJAG_03752","SJAG_04205","SJAG_00769","SJAG_03758","SJAG_00581","SJAG_00584","SJAG_02798","SJAG_00746","SJAG_01230","SJAG_02872","SJAG_02458","SJAG_00641","SJAG_02254","SJAG_01658","SJAG_04755","SJAG_03255","SJAG_01325","SJAG_03145","SJAG_04613","SJAG_03366","SJAG_00743","SJAG_00735","SJAG_07011","SJAG_03884","SJAG_04989","SJAG_03441","SJAG_02846","SJAG_00440","SJAG_02869","SJAG_03694","SJAG_02981","SJAG_02329","SJAG_03431","SJAG_02589","SJAG_02466","SJAG_02066","SJAG_03599","SJAG_00739","SJAG_01611","SJAG_02447","SJAG_03668","SJAG_01475","SJAG_01465","SJAG_04576","SJAG_02768","SJAG_02541","SJAG_02500","SJAG_01111","SJAG_02927","SJAG_02385","SJAG_03776","SJAG_05020","SJAG_02314","SJAG_00087","SJAG_02773","SJAG_00868","SJAG_00349","SJAG_01016","SJAG_05192","SJAG_03033","SJAG_04758","SJAG_02303","SJAG_04274","SJAG_02571","SJAG_00873","SJAG_01711","SJAG_04213","SJAG_03579","SJAG_02906"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117065,90177,110101,112469,113728,114504,112644,95373,112813,95380,96140,90070,89547,111244,107369,87278,117464,114899,116951,108958,103350,96576,88350,102619,87634,95934,115846,93793,107952,113801,98170,97737,104061,93696,93496,106820,94934,113890,88760,87967,93640,102281,115785,106933,97313,114885,94128,116035,117043,106389,92274,93668,87134,91782,90191,108834,98646,109073,93606,112041,106237,94959,87457,87819,93262,116401,116766,117113,98003,108556,101060,109966,104522,100474,104514,113717,107171,93620,105121,89272,102867,114752,105263,90896,88587,92994,112626,115201,98892,114214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045815"}]},"cv_name":"biological_process","definition":"An epigenetic process that increases gene expression at specific genomic regions through chromatin remodeling either by modifying higher order chromatin fiber structure, nucleosomal histones, or the cytosine DNA demethylation.","definition_xrefs":["PMID:36618446"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"epigenetic regulation of gene expression","termid":"GO:0040029"}],"gene_count":90,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00087":null,"SJAG_00184":null,"SJAG_00349":null,"SJAG_00440":null,"SJAG_00441":null,"SJAG_00581":null,"SJAG_00584":null,"SJAG_00641":null,"SJAG_00735":null,"SJAG_00739":null,"SJAG_00743":null,"SJAG_00746":null,"SJAG_00769":null,"SJAG_00868":null,"SJAG_00873":null,"SJAG_00896":null,"SJAG_01016":null,"SJAG_01110":null,"SJAG_01111":null,"SJAG_01230":null,"SJAG_01325":null,"SJAG_01465":null,"SJAG_01475":null,"SJAG_01513":null,"SJAG_01611":null,"SJAG_01622":null,"SJAG_01653":null,"SJAG_01658":null,"SJAG_01711":null,"SJAG_01804":null,"SJAG_02066":null,"SJAG_02170":null,"SJAG_02254":null,"SJAG_02303":null,"SJAG_02314":null,"SJAG_02329":null,"SJAG_02385":null,"SJAG_02447":null,"SJAG_02458":null,"SJAG_02466":null,"SJAG_02500":null,"SJAG_02541":null,"SJAG_02549":null,"SJAG_02571":null,"SJAG_02589":null,"SJAG_02768":null,"SJAG_02773":null,"SJAG_02798":null,"SJAG_02846":null,"SJAG_02869":null,"SJAG_02872":null,"SJAG_02906":null,"SJAG_02927":null,"SJAG_02981":null,"SJAG_03033":null,"SJAG_03145":null,"SJAG_03255":null,"SJAG_03366":null,"SJAG_03431":null,"SJAG_03441":null,"SJAG_03576":null,"SJAG_03579":null,"SJAG_03599":null,"SJAG_03668":null,"SJAG_03694":null,"SJAG_03752":null,"SJAG_03758":null,"SJAG_03776":null,"SJAG_03787":null,"SJAG_03839":null,"SJAG_03884":null,"SJAG_03944":null,"SJAG_04005":null,"SJAG_04038":null,"SJAG_04097":null,"SJAG_04194":null,"SJAG_04205":null,"SJAG_04213":null,"SJAG_04274":null,"SJAG_04576":null,"SJAG_04596":null,"SJAG_04613":null,"SJAG_04755":null,"SJAG_04758":null,"SJAG_04989":null,"SJAG_05020":null,"SJAG_05192":null,"SJAG_05313":null,"SJAG_07011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of gene expression, epigenetic","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of gene expression, epigenetic","type":"exact"},{"name":"up regulation of gene expression, epigenetic","type":"exact"},{"name":"up-regulation of gene expression, epigenetic","type":"exact"},{"name":"upregulation of gene expression, epigenetic","type":"exact"}],"termid":"GO:0141137","terms_by_termid":{"GO:0045815":null}}


id: PBO:0080909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta","termid":"PBO:0080909"}


id: PBO:0077363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 104","termid":"PBO:0077363"}


id: PBO:0051342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-23 (pseudogene)","termid":"PBO:0051342"}


id: GO:0048326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of axial mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of axial mesodermal cell fate determination","termid":"GO:0048324"},{"relation_name":"is_a","term_name":"positive regulation of mesodermal cell fate determination","termid":"GO:0048336"},{"relation_name":"positively_regulates","term_name":"axial mesodermal cell fate determination","termid":"GO:0048323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of axial mesodermal cell fate determination","synonyms":[{"name":"activation of axial mesodermal cell fate determination","type":"narrow"},{"name":"stimulation of axial mesodermal cell fate determination","type":"narrow"},{"name":"up regulation of axial mesodermal cell fate determination","type":"exact"},{"name":"up-regulation of axial mesodermal cell fate determination","type":"exact"},{"name":"upregulation of axial mesodermal cell fate determination","type":"exact"}],"termid":"GO:0048326"}


id: PBO:0066845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 145","termid":"PBO:0066845"}


id: PBO:0086834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function with similarity to helicases; YLR462W is within the telomere on the right arm of chromosome XII","termid":"PBO:0086834"}


id: MONDO:0011300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 3, autosomal dominant","secondary_identifiers":["MEDGEN:400454","OMIM:603221","MESH:C566397","UMLS:C1864111"],"synonyms":[{"name":"MYP3","type":"exact"},{"name":"myopia 3, autosomal dominant","type":"exact"},{"name":"myopia-3","type":"exact"}],"termid":"MONDO:0011300","xrefs":{"Monarch":{"xref_id":"0011300"}}}


id: PBO:0014273
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUppressor of Cdc2 ts-mutations","termid":"PBO:0014273"}


id: PBO:0012060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose-specific flocculin Gsf2","termid":"PBO:0012060"}


id: PR:P40388
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- uvi15 gene.","definition_xrefs":["UniProtKB:P40388","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UV-induced protein uvi15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC649.04","synonyms":[{"name":"Spom972h-uvi15","type":"exact"}],"termid":"PR:P40388"}


id: PBO:0087292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Silencing protein; interacts with Sir2p, Sir4p, and histone H3/H4 tails to establish transcriptionally silent chromatin; required for spreading of silenced chromatin; recruited to chromatin through interaction with Rap1p; C-terminus assumes variant winged helix-turn-helix (wH) fold that mediates homodimerization, which is critical for holo-SIR complex loading; required for telomere hypercluster formation in quiescent yeast cells; has paralog ORC1 from whole genome duplication","termid":"PBO:0087292"}


id: GO:0046842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of trisporic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisporic acid metabolic process","termid":"GO:0046841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"trisporic acid biosynthetic process","synonyms":[{"name":"trisporic acid anabolism","type":"exact"},{"name":"trisporic acid biosynthesis","type":"exact"},{"name":"trisporic acid formation","type":"exact"},{"name":"trisporic acid synthesis","type":"exact"}],"termid":"GO:0046842"}


id: PBO:0113045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromatin remodeler that regulates various aspects of transcription; acts in conjunction with Isw1b to regulate chromatin structure, maintain chromatin integrity during transcription elongation by RNAP II by preventing trans-histone exchange over coding regions; contains chromo domain, helicase domain and DNA-binding domain; component of both SAGA and SLIK complexes; in human, deletion of CHD1 is a frequent event in prostate cancer","termid":"PBO:0113045"}


id: GO:0102580
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin 3-O-beta-D-glucoside betaine + UDP-alpha-D-xylose = cyanidin 3-O-beta-D-sambubioside + UDP.","definition_xrefs":["GOC:pz","EC:2.4.2.51"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"cyanidin 3-O-glucoside 2-O''-xylosyltransferase activity","secondary_identifiers":["RHEA:35443","MetaCyc:RXN-15326"],"termid":"GO:0102580"}


id: PBO:0073088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDHA pseudogene 4","termid":"PBO:0073088"}


id: MONDO:1012170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lower motor neuron disease, non-human animal","termid":"MONDO:1011848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lower motor neuron disease, sheep","secondary_identifiers":["OMIA:000662-9940"],"termid":"MONDO:1012170","xrefs":{"Monarch":{"xref_id":"1012170"}}}


id: PATO:0000741
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000741 high enzyme function value (obsolete PATO:0000741)","termid":"PATO:0000741"}


id: MONDO:0036483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Jeune syndrome","termid":"MONDO:0018770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"short-rib thoracic dysplasia 18 with polydactyly","secondary_identifiers":["MEDGEN:1632904","UMLS:C4693420","DOID:0080293","OMIM:617866"],"synonyms":[{"name":"SRTD18","type":"related"},{"name":"short-rib thoracic dysplasia 18 with polydactyly","type":"exact"}],"termid":"MONDO:0036483","xrefs":{"Monarch":{"xref_id":"0036483"}}}


id: SO:0001237
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence feature that corresponds to a single amino acid residue in a polypeptide.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"},{"relation_name":"part_of","term_name":"polypeptide","termid":"SO:0000104"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino_acid","secondary_identifiers":["http://en.wikipedia.org/wiki/Amino_acid"],"synonyms":[{"name":"amino acid","type":"exact"}],"termid":"SO:0001237"}


id: PBO:0028228
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_trehalose_level_during_cellular_response_to_oxidative_stress","termid":"PBO:0028228"}


id: PBO:0049805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 1","termid":"PBO:0049805"}


id: PBO:0114523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone chaperone, Clr6 and Rpd3L complex WD repeat subunit Prw1","termid":"PBO:0114523"}


id: PATO:0000433
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A parental quality inhering in a bearer by virtue of exhibiting the characteristic of a father.","definition_xrefs":["WordNet:WordNet"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000433 paternal (obsolete PATO:0000433)","termid":"PATO:0000433"}


id: GO:0052697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a xenobiotic substance by the conjugation of glucuronic acid. The resultant glucuronosides are often much more water-soluble than the xenobiotic precursor, enabling efficient excretion.","definition_xrefs":["GOC:BHF","PMID:20056724"],"gene_count":0,"genotype_count":0,"name":"obsolete xenobiotic glucuronidation (obsolete GO:0052697)","synonyms":[{"name":"phase II metabolism","type":"narrow"}],"termid":"GO:0052697"}


id: PBO:0064256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing A4","termid":"PBO:0064256"}


id: MONDO:0006920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition in which blood glucose levels are high, but not high enough to be classified as type 2 diabetes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"glucose metabolism disease","termid":"MONDO:0002908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"prediabetes syndrome","secondary_identifiers":["MEDGEN:83928","UMLS:C0362046","NCIT:C122685","EFO:1001121","MedDRA:10065542","MESH:D011236","DOID:11716"],"synonyms":[{"name":"borderline diabetes","type":"exact"},{"name":"prediabetes","type":"exact"},{"name":"prediabetic state","type":"exact"}],"termid":"MONDO:0006920","xrefs":{"Monarch":{"xref_id":"0006920"}}}


id: GO:0097469
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate. This reaction requires the binding of a regulatory cyclin subunit.","definition_xrefs":["GOC:al","PMID:1372994","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclin-dependent protein tyrosine kinase activity (obsolete GO:0097469)","synonyms":[{"name":"cyclin-dependent protein tyrosine kinase activity","type":"exact"}],"termid":"GO:0097469"}


id: PBO:0092014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b, Cob1","termid":"PBO:0092014"}


id: GO:0030149
data:
  {"annotated_genes":["SJAG_01219","SJAG_00519"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108306,89308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046521"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid).","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid metabolic process","termid":"GO:0006665"},{"relation_name":"is_a","term_name":"membrane lipid catabolic process","termid":"GO:0046466"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00519":null,"SJAG_01219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sphingolipid catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9845614"],"synonyms":[{"name":"sphingolipid breakdown","type":"exact"},{"name":"sphingolipid catabolism","type":"exact"},{"name":"sphingolipid degradation","type":"exact"}],"termid":"GO:0030149","terms_by_termid":{"GO:0046521":null}}


id: MONDO:0014671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary motor and sensory neuropathy type 6 in which the cause of the disease is a mutation in the SLC25A46 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"motor peripheral neuropathy","termid":"MONDO:0002316"},{"relation_name":"is_a","term_name":"hereditary motor and sensory neuropathy type 6","termid":"MONDO:0019551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"neuropathy, hereditary motor and sensory, type 6B","secondary_identifiers":["MEDGEN:895482","GARD:18092","UMLS:C4225302","OMIM:616505"],"synonyms":[{"name":"CMT6B","type":"exact"},{"name":"Charcot-Marie-Tooth disease, type 6B","type":"exact"},{"name":"HMSN 6B","type":"exact"},{"name":"HMSN6B","type":"exact"},{"name":"SLC25A46 hereditary motor and sensory neuropathy type 6","type":"exact"},{"name":"hereditary motor and sensory neuropathy type 6 caused by mutation in SLC25A46","type":"exact"},{"name":"neuropathy, hereditary motor and sensory, type 6B","type":"exact"},{"name":"neuropathy, hereditary motor and sensory, type VIB","type":"exact"}],"termid":"MONDO:0014671","xrefs":{"Monarch":{"xref_id":"0014671"}}}


id: PR:000085722
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.3, initiator methionine removed K36-methylated form (Schizosaccharomyces pombe) whose methylation type is trimethylation. Example: UniProtKB:P10651, 2-136, Lys-37, MOD:00083.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:37459529"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht3/Me3(K36)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"PRO_0000221367, Lys-37, MOD:00083","type":"narrow"},{"name":"PomBase_original_PRO_term_name: histone H3.3, initiator methionine removed K36-trimethylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht3/InitMet-/K36Me3","type":"exact"},{"name":"UniProtKB:P10651, 2-136, Lys-37, MOD:00083","type":"narrow"},{"name":"hht3/Me3(K36)","type":"exact"}],"termid":"PR:000085722"}


id: PBO:0064041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 75","termid":"PBO:0064041"}


id: PBO:0041275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1q and TNF related 2","termid":"PBO:0041275"}


id: PBO:0074881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 60","termid":"PBO:0074881"}


id: PBO:0041867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 14","termid":"PBO:0041867"}


id: GO:0090365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the covalent alteration of one or more nucleotides within an mRNA molecule to produce an mRNA molecule with a sequence that differs from that coded genetically.","definition_xrefs":["GOC:dph","GOC:tb","PMID:14559896","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA metabolic process","termid":"GO:1903311"},{"relation_name":"regulates","term_name":"mRNA modification","termid":"GO:0016556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"regulation of mRNA modification","synonyms":[{"name":"regulation of mRNA editing","type":"narrow"}],"termid":"GO:0090365"}


id: PBO:0030591
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_vacuolar_lysine_level","termid":"PBO:0030591"}


id: MONDO:0007473
data:
  {"annotated_genes":["SJAG_01114","SJAG_02278","SJAG_04765","SJAG_04522"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84862,84860,84861,84859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011444"}]},"cv_name":"mondo","definition":"Duane retraction syndrome (DRS) is a congenital form of strabismus characterized by horizontal eye movement limitation, globe retraction and palpebral fissure narrowing in attempted adduction. It is caused by a failure of development of the abducens nerve and can lead to amblyopia.","definition_xrefs":["Orphanet:233"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"strabismus","termid":"MONDO:0003432"},{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"nuclear oculomotor paralysis","termid":"MONDO:0015083"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01114":null,"SJAG_02278":null,"SJAG_04522":null,"SJAG_04765":null},"genotype_count":0,"is_obsolete":false,"name":"Duane retraction syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:378.71","SCTID:60318001","UMLS:C0013261","MESH:D004370","NORD:1062","MEDGEN:4413","MedDRA:10013799","NCIT:C84678","OMIMPS:126800","DOID:12557","GARD:6288"],"synonyms":[{"name":"DRS","type":"exact"},{"name":"DURS","type":"exact"},{"name":"Duane anomaly","type":"related"},{"name":"Duane retraction syndrome","type":"exact"},{"name":"Duane syndrome","type":"exact"},{"name":"Duane's syndrome","type":"exact"},{"name":"Stilling-Turk-Duane syndrome","type":"exact"},{"name":"retraction syndrome","type":"related"}],"termid":"MONDO:0007473","terms_by_termid":{"MONDO:0011444":null},"xrefs":{"Monarch":{"xref_id":"0007473"}}}


id: MOD:01369
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a carboxamido group with a carboxyl methyl ester group.","definition_xrefs":["Unimod:528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methylated residue","termid":"MOD:00393"},{"relation_name":"is_a","term_name":"deamidated residue","termid":"MOD:00400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"deamidated and methyl esterified residue","synonyms":[{"name":"Deamidation followed by a methylation","type":"related"},{"name":"Methyl+Deamidated","type":"related"}],"termid":"MOD:01369"}


id: PBO:0004938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Uap2","termid":"PBO:0004938"}


id: MONDO:0006109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm arising from mesothelial cells in the pleura. It is characterized by the presence of neoplastic epithelioid cells and sarcomatoid features.","definition_xrefs":["NCIT:C4282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant mesothelioma","termid":"MONDO:0006292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant biphasic mesothelioma","secondary_identifiers":["EFO:1000124","UMLS:C0334515","DOID:4486","ICDO:9053/3","MEDGEN:137775"],"synonyms":[{"name":"biphasic mesothelioma","type":"exact"},{"name":"malignant biphasic mesothelioma","type":"exact"},{"name":"malignant biphasic mesothelioma, malignant","type":"exact"},{"name":"malignant mixed mesothelioma","type":"exact"},{"name":"mesothelioma, biphasic, malignant","type":"exact"},{"name":"mesothelioma, biphasic, malignant (morphologic abnormality)","type":"exact"},{"name":"mixed mesothelioma","type":"exact"}],"termid":"MONDO:0006109","xrefs":{"Monarch":{"xref_id":"0006109"}}}


id: GO:0015423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + maltose(out) = ADP + phosphate + maltose(in).","definition_xrefs":["RHEA:22132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maltose transmembrane transporter activity","termid":"GO:0005363"},{"relation_name":"is_a","term_name":"ABC-type oligosaccharide transporter activity","termid":"GO:0015422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ABC-type maltose transporter activity","secondary_identifiers":["EC:7.5.2.1","MetaCyc:ABC-16-RXN"],"synonyms":[{"name":"ABC-type maltose transporter","type":"exact"},{"name":"ATP-dependent maltose transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled maltose transmembrane transporter activity","type":"related"},{"name":"maltooligosaccharide-importing ATPase activity","type":"related"},{"name":"maltose ABC transporter","type":"exact"},{"name":"maltose-transporting ATPase activity","type":"related"}],"termid":"GO:0015423"}


id: MONDO:0016822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare systemic disease characterized by severe myalgia and peripheral eosinophilia associated with tryptophan dietary supplementation. The symptoms do not subside after tryptophan discontinuation. Clinical presentation includes muscle tenderness and cramps, fatigue, weakness, paresthesia, peripheral edema, arthralgia, dyspnea, skin rash, dry mouth, and development of scleroderma-like skin abnormalities.","definition_xrefs":["Orphanet:2582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myalgia-eosinophilia syndrome associated with tryptophan","secondary_identifiers":["MESH:D016603","MEDGEN:698358","UMLS:C1275050","GARD:18775","MedDRA:10014952"],"termid":"MONDO:0016822","xrefs":{"Monarch":{"xref_id":"0016822"}}}


id: GO:0099035
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the spine apparatus membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of spine apparatus membrane (obsolete GO:0099035)","termid":"GO:0099035"}


id: GO:0042847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sorbose, the ketohexose xylo-2-hexulose. Sorbose is produced commercially by fermentation and is used as an intermediate in the manufacture of ascorbic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sorbose metabolic process","termid":"GO:0019311"},{"relation_name":"is_a","term_name":"hexose biosynthetic process","termid":"GO:0019319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"sorbose biosynthetic process","synonyms":[{"name":"sorbose anabolism","type":"exact"},{"name":"sorbose biosynthesis","type":"exact"},{"name":"sorbose formation","type":"exact"},{"name":"sorbose synthesis","type":"exact"}],"termid":"GO:0042847"}


id: MONDO:0850097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autoimmune encephalitis involving the mesial temporal lobes and clinically characterized by subacute onset (i. e. rapid progression of less than three months) of short-term memory deficits, seizures or psychiatric symptoms, such as behavioral changes, anxiety, depression, and psychosis. Further diagnostic criteria are bilateral abnormalities restricted to the mesial temporal lobes in brain MRI, cerebrospinal fluid pleocytosis and/or epileptic or slow-wave activity involving the temporal lobes in EEG, and reasonable exclusion of alternative causes. Paraneoplastic or non-paraneoplastic antibodies against neuronal antigens may be found in serum and/or cerebrospinal fluid.","direct_ancestors":[{"relation_name":"is_a","term_name":"limbic encephalitis","termid":"MONDO:0015588"},{"relation_name":"is_a","term_name":"autoimmune encephalitis","termid":"MONDO:0020640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune limbic encephalitis","secondary_identifiers":["Orphanet:623615","icd11.foundation:1254443511","UMLS:C2930824","GARD:22492","MEDGEN:419645"],"termid":"MONDO:0850097","xrefs":{"Monarch":{"xref_id":"0850097"}}}


id: MONDO:0010072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive form of spondyloepiphyseal dysplasia tarda.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spondyloepiphyseal dysplasia with congenital joint dislocations","termid":"MONDO:0007738"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia tarda","termid":"MONDO:0019667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005497"],"is_obsolete":false,"name":"spondyloepiphyseal dysplasia tarda, autosomal recessive","secondary_identifiers":["GARD:15237","UMLS:C1849054","MESH:C564797","MEDGEN:338604","OMIM:271600","DOID:0112293"],"synonyms":[{"name":"autosomal recessive spondyloepiphyseal dysplasia tarda","type":"exact"},{"name":"spondyloepiphyseal dysplasia tarda, autosomal recessive","type":"exact"}],"termid":"MONDO:0010072","xrefs":{"Monarch":{"xref_id":"0010072"}}}


id: PBO:0078202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 6-4","termid":"PBO:0078202"}


id: PBO:0057702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1289-2","termid":"PBO:0057702"}


id: GO:0014870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muscle inactivity stimulus.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to inactivity","termid":"GO:0014854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to muscle inactivity","termid":"GO:0014870"}


id: GO:1902782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a decane stimulus.","definition_xrefs":["GO_REF:0000071","PMID:23826995","GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkane","termid":"GO:1902778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to decane","termid":"GO:1902782"}


id: FYPO:0005382
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which exit from meiosis begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle phase transition","termid":"FYPO:0005274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"delayed exit from meiosis","synonyms":[{"name":"delayed exit from meiosis II","type":"exact"},{"name":"delayed exit from meiotic nuclear division","type":"exact"}],"termid":"FYPO:0005382"}


id: GO:0048438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a floral whorl over time, from its formation to the mature structure. A floral whorl is a circular arrangement of parts of a flower arising from a stem of a plant.","definition_xrefs":["PO:0025023","GOC:PO_curators","GOC:dph","GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"flower development","termid":"GO:0009908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floral whorl development","secondary_identifiers":["GO:0048413"],"synonyms":[{"name":"collective phyllome structure development","type":"broad"}],"termid":"GO:0048438"}


id: MONDO:0000907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete amelogenesis imperfecta type 1C (obsolete MONDO:0000907)","termid":"MONDO:0000907","xrefs":{"Monarch":{"xref_id":"0000907"}}}


id: GO:0009203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a ribonucleoside triphosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate catabolic process","termid":"GO:0009143"},{"relation_name":"is_a","term_name":"ribonucleoside triphosphate metabolic process","termid":"GO:0009199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"ribonucleoside triphosphate catabolic process","synonyms":[{"name":"ribonucleoside triphosphate breakdown","type":"exact"},{"name":"ribonucleoside triphosphate catabolism","type":"exact"},{"name":"ribonucleoside triphosphate degradation","type":"exact"}],"termid":"GO:0009203"}


id: MONDO:0012417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal dominant form of heart-hand syndrome, first described in members of a Slovenian family, that is characterized by adult onset, progressive cardiac conduction disease, tachyarrhythmias that can lead to sudden death, dilated cardiomyopathy and brachydactyly, with the hands less severely affected than the feet. Muscle weakness and/or myopathic electromyographic findings have been observed in some cases.","definition_xrefs":["Orphanet:168796"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome associated with dilated cardiomyopathy (obsolete MONDO:0016337)","termid":"MONDO:0016337"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"heart-hand syndrome","termid":"MONDO:0016432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0000426"],"is_obsolete":false,"name":"heart-hand syndrome, Slovenian type","secondary_identifiers":["MESH:C535852","icd11.foundation:1814304618","MEDGEN:341859","OMIM:610140","GARD:9846","SCTID:721014007","UMLS:C1857829"],"synonyms":[{"name":"Cardiac conduction disease-dilated cardiomyopathy-brachydactyly syndrome","type":"exact"},{"name":"atriodigital dysplasia, Slovenian type","type":"exact"},{"name":"heart-hand syndrome, Slovenian type","type":"exact"}],"termid":"MONDO:0012417","xrefs":{"Monarch":{"xref_id":"0012417"}}}


id: PBO:0111754
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYR family","termid":"PBO:0111754"}


id: PBO:0073192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein V","termid":"PBO:0073192"}


id: GO:0070559
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex found in the lysosome that contains beta-galactosidase, cathepsin A, alpha-neuraminidase and N-acetylgalactosamine-6-sulfate sulfatase, and is involved in glycosaminoglycan catabolism.","definition_xrefs":["PMID:8910459","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005575","GO:0005773","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"lysosomal multienzyme complex","synonyms":[{"name":"GALNS-lysosomal hydrolase 1.27 MDa complex","type":"narrow"}],"termid":"GO:0070559"}


id: GO:0002862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of an inflammatory response to an antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inflammatory response to antigenic stimulus","termid":"GO:0002861"},{"relation_name":"is_a","term_name":"negative regulation of inflammatory response","termid":"GO:0050728"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"inflammatory response to antigenic stimulus","termid":"GO:0002437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of inflammatory response to antigenic stimulus","secondary_identifiers":["Reactome:R-HSA-9664323","Reactome:R-HSA-9660821","Reactome:R-HSA-9664535","Reactome:R-HSA-9662834"],"synonyms":[{"name":"down regulation of inflammatory response to antigenic stimulus","type":"exact"},{"name":"down-regulation of inflammatory response to antigenic stimulus","type":"exact"},{"name":"downregulation of inflammatory response to antigenic stimulus","type":"exact"},{"name":"inhibition of inflammatory response to antigenic stimulus","type":"narrow"}],"termid":"GO:0002862"}


id: PBO:0060347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin XVB","termid":"PBO:0060347"}


id: PBO:0074642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 35","termid":"PBO:0074642"}


id: GO:0043276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Apoptosis triggered by inadequate or inappropriate adherence to substrate e.g. after disruption of the interactions between normal epithelial cells and the extracellular matrix.","definition_xrefs":["GOC:jl","PMID:37667281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anoikis","secondary_identifiers":["Wikipedia:Anoikis"],"synonyms":[{"name":"detachment induced cell death","type":"exact"},{"name":"suspension induced apoptosis","type":"exact"}],"termid":"GO:0043276"}


id: GO:0031978
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by a plastid thylakoid membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thylakoid lumen","termid":"GO:0031977"},{"relation_name":"part_of","term_name":"plastid thylakoid","termid":"GO:0031976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plastid thylakoid lumen","termid":"GO:0031978"}


id: MONDO:0000439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete batten disease (obsolete MONDO:0000439)","termid":"MONDO:0000439","xrefs":{"Monarch":{"xref_id":"0000439"}}}


id: PBO:0061155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide nucleotide adenylyltransferase 3","termid":"PBO:0061155"}


id: GO:0042614
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CD70, a receptor found on the surface of most activated B cells and some activated T cells.","definition_xrefs":["ISBN:0120781859","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"CD70 receptor binding","synonyms":[{"name":"CD27 receptor activity","type":"related"},{"name":"CD27L binding","type":"exact"}],"termid":"GO:0042614"}


id: PBO:0064671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 6","termid":"PBO:0064671"}


id: GO:0035110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the anatomical structures of a leg are generated and organized. A leg is a limb on which an animal walks and stands.","definition_xrefs":["GOC:bf","ISBN:0198612001"],"gene_count":0,"genotype_count":0,"name":"obsolete leg morphogenesis (obsolete GO:0035110)","synonyms":[{"name":"leg morphogenesis","type":"exact"}],"termid":"GO:0035110"}


id: PBO:0047219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 225 member A","termid":"PBO:0047219"}


id: PBO:0046034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit 2 beta pseudogene 2","termid":"PBO:0046034"}


id: MONDO:0009200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Eyebrow duplication-syndactyly syndrome is characterized by partial duplication of the eyebrows and syndactyly of the fingers and toes. It has been described in three patients (a brother and sister and an isolated case). Skin hyperelasticity, hypertrichosis and long eyelashes, and abnormal periorbital wrinkling were also reported in some of the patients. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:3172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eyebrow duplication-syndactyly syndrome","secondary_identifiers":["GARD:2216","OMIM:227210","MESH:C536383","MEDGEN:347327","UMLS:C1856896"],"synonyms":[{"name":"eyebrows duplication of, with stretchable skin and syndactyly","type":"related"},{"name":"eyebrows, DUPLICATION of, with stretchable skin and syndactyly","type":"related"}],"termid":"MONDO:0009200","xrefs":{"Monarch":{"xref_id":"0009200"}}}


id: PBO:0026677
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_sodium_dodecyl_sulfate","termid":"PBO:0026677"}


id: PBO:0043419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnosine dipeptidase 2","termid":"PBO:0043419"}


id: GO:0047389
data:
  {"annotated_genes":["SJAG_00622"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101016],"is_not":false,"summary":null,"term":"GO:0047389"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + L-1-glycero-3-phosphocholine = glycerol-3-phosphate + choline.","definition_xrefs":["EC:3.1.4.2","MetaCyc:3.1.4.2-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"glycerophosphocholine phosphodiesterase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:16061","Reactome:R-HSA-6814132"],"synonyms":[{"name":"glycerolphosphorylcholine phosphodiesterase activity","type":"related"},{"name":"glycerophosphinicocholine diesterase activity","type":"related"},{"name":"glycerophosphohydrolase activity","type":"related"},{"name":"glycerylphosphorylcholinediesterase activity","type":"related"},{"name":"sn-glycero-3-phosphocholine glycerophosphohydrolase activity","type":"related"},{"name":"sn-glycero-3-phosphorylcholine diesterase activity","type":"related"}],"termid":"GO:0047389","terms_by_termid":{"GO:0047389":null}}


id: PBO:0039090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine--glyoxylate aminotransferase","termid":"PBO:0039090"}


id: PBO:0085615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in DNA replication; component of the Mcm2-7 hexameric helicase complex that binds chromatin as a part of the pre-replicative complex; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0085615"}


id: MONDO:1010318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"GAPO syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis, non-human animal","termid":"MONDO:1011310"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAPO syndrome, non-human animal","secondary_identifiers":["OMIA:002544"],"termid":"MONDO:1010318","xrefs":{"Monarch":{"xref_id":"1010318"}}}


id: PATO:0000380
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A frequency which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"frequency","termid":"PATO:0000044"},{"relation_name":"is_a","term_name":"increased rate","termid":"PATO:0000912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased frequency","synonyms":[{"name":"frequent","type":"related"},{"name":"high frequency","type":"exact"}],"termid":"PATO:0000380"}


id: MONDO:0014282
data:
  {"annotated_genes":["SJAG_05289"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85116],"is_not":false,"summary":null,"term":"MONDO:0014282"}]},"cv_name":"mondo","definition":"Any pure hereditary spastic paraplegia in which the cause of the disease is a mutation in the REEP2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pure hereditary spastic paraplegia","termid":"MONDO:0015149"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 72","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17660","UMLS:C5882669","Orphanet:401849","MEDGEN:1847422","OMIM:615625","DOID:0110817"],"synonyms":[{"name":"REEP2 pure hereditary spastic paraplegia","type":"exact"},{"name":"SPG72","type":"exact"},{"name":"autosomal spastic paraplegia type 72","type":"exact"},{"name":"hereditary spastic paraplegia type 72","type":"exact"},{"name":"pure hereditary spastic paraplegia caused by mutation in REEP2","type":"exact"},{"name":"spastic paraplegia 72, autosomal dominant","type":"narrow"},{"name":"spastic paraplegia 72, autosomal recessive","type":"narrow"}],"termid":"MONDO:0014282","terms_by_termid":{"MONDO:0014282":null},"xrefs":{"Monarch":{"xref_id":"0014282"}}}


id: PBO:0027251
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_dimethyl_sulfoxide","termid":"PBO:0027251"}


id: MONDO:0100454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inherited retinal dystrophy in which the cause of the disease is a mutation in the GUCY2D gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"GUCY2D retinopathy","synonyms":[{"name":"retinopathy caused by mutation in GUCY2D","type":"exact"}],"termid":"MONDO:0100454","xrefs":{"Monarch":{"xref_id":"0100454"}}}


id: PBO:0027930
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_cellular_response_to_heat","termid":"PBO:0027930"}


id: PBO:0000251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain","termid":"PBO:0000251"}


id: MONDO:0008911
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"histiocytoid cardiomyopathy","termid":"MONDO:0010771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"cardiac lipidosis, familial","secondary_identifiers":["MEDGEN:395234","GARD:15148","MESH:C565884","OMIM:212080","UMLS:C1859332"],"synonyms":[{"name":"cardiac lipidosis, familial","type":"exact"}],"termid":"MONDO:0008911","xrefs":{"Monarch":{"xref_id":"0008911"}}}


id: FYPO:0006245
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic chromosome condensation is decreased over medium (90-940 kb) ranges within a chromosome arm.","definition_xrefs":["PomBase:mah","PMID:28825727"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased medium range intra-arm mitotic chromosome condensation during interphase (obsolete FYPO:0006245)","synonyms":[{"name":"decreased medium range intra-arm chromosome condensation during interphase of mitotic cell cycle","type":"exact"},{"name":"decreased medium range intra-arm chromosome condensation during mitotic interphase","type":"exact"},{"name":"decreased medium range intra-arm mitotic chromosome condensation during interphase during vegetative growth","type":"exact"},{"name":"reduced medium range intra-arm mitotic chromosome condensation during interphase","type":"exact"}],"termid":"FYPO:0006245"}


id: MONDO:0012844
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary ciliary dyskinesia that has material basis in variation in the chromosome region 15q24-q25.","definition_xrefs":["DOID:0110616","PMID:18270537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 8","secondary_identifiers":["GARD:15546","MEDGEN:393653","MESH:C567373","OMIM:612274","UMLS:C2677085"],"synonyms":[{"name":"CILD8","type":"exact"},{"name":"ciliary dyskinesia, primary, 8","type":"related"},{"name":"ciliary dyskinesia, primary, 8, with or without situs inversus","type":"related"},{"name":"primary ciliary dyskinesia 8 with or without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia type 8","type":"exact"}],"termid":"MONDO:0012844","xrefs":{"Monarch":{"xref_id":"0012844"}}}


id: PATO:0002271
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An accumulation which is relative low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"accumulation","termid":"PATO:0002269"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased accumulation","termid":"PATO:0002271"}


id: PBO:0066615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhophilin Rho GTPase binding protein 1","termid":"PBO:0066615"}


id: MONDO:0009619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly-micromelia syndrome","secondary_identifiers":["UMLS:C1855079","OMIM:251230","MEDGEN:381553","MESH:C565382","GARD:18011","DOID:0081432","Orphanet:572768"],"synonyms":[{"name":"MIMIS","type":"related"},{"name":"microcephaly-micromelia syndrome","type":"exact"}],"termid":"MONDO:0009619","xrefs":{"Monarch":{"xref_id":"0009619"}}}


id: PBO:0091490
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"accumulation and persistence of Swi5 foci in rad54delta cells","termid":"PBO:0091490"}


id: PBO:0068880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 120, pseudogene","termid":"PBO:0068880"}


id: PBO:0028311
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_methylglyoxal","termid":"PBO:0028311"}


id: PBO:0004921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp6 (predicted)","termid":"PBO:0004921"}


id: GO:0043062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures in the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane, and also covers the host cell environment outside an intracellular parasite.","definition_xrefs":["GOC:dph","GOC:mah","GOC:ai","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"extracellular structure organization","synonyms":[{"name":"extracellular structure organisation","type":"exact"},{"name":"extracellular structure organization and biogenesis","type":"exact"}],"termid":"GO:0043062"}


id: PBO:0043247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 7","termid":"PBO:0043247"}


id: PBO:0078650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 3-1","termid":"PBO:0078650"}


id: GO:0048895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a glial cell in a lateral line nerve.","definition_xrefs":["PMID:12062041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell differentiation","termid":"GO:0010001"},{"relation_name":"part_of","term_name":"lateral line nerve development","termid":"GO:0048892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral line nerve glial cell differentiation","termid":"GO:0048895"}


id: PBO:0065786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quiescin sulfhydryl oxidase 2","termid":"PBO:0065786"}


id: GO:0090370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of cholesterol efflux. Cholesterol efflux is the directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle.","definition_xrefs":["GOC:yaf","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cholesterol efflux","termid":"GO:0010874"},{"relation_name":"is_a","term_name":"negative regulation of cholesterol transport","termid":"GO:0032375"},{"relation_name":"negatively_regulates","term_name":"cholesterol efflux","termid":"GO:0033344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cholesterol efflux","termid":"GO:0090370"}


id: PBO:0042704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUGBP Elav-like family member 3","termid":"PBO:0042704"}


id: PBO:0053690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 885","termid":"PBO:0053690"}


id: MONDO:0002385
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign encapsulated neoplasm of the kidney, characterized by the presence of cysts separated by septa. There are no solid areas present. The septa are lined by one layer of epithelial cells that have eosinophilic or clear cytoplasm. The cystic spaces contain serous or hemorrhagic fluid.","definition_xrefs":["NCIT:C7504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney benign neoplasm","termid":"MONDO:0002513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"benign cystic nephroma","secondary_identifiers":["DOID:2673","ICDO:8959/0","MEDGEN:220422","UMLS:C1266138"],"synonyms":[{"name":"benign cystic nephroma","type":"exact"},{"name":"benign multilocular cystic nephroma","type":"exact"},{"name":"cystic nephroma","type":"exact"}],"termid":"MONDO:0002385","xrefs":{"Monarch":{"xref_id":"0002385"}}}


id: MONDO:0016024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"thoracic malformation","termid":"MONDO:0015929"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"shoulder and thorax deformity-congenital heart disease syndrome","secondary_identifiers":["GARD:4859","Orphanet:1940"],"termid":"MONDO:0016024","xrefs":{"Monarch":{"xref_id":"0016024"}}}


id: PBO:0064221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C delta 3","termid":"PBO:0064221"}


id: GO:0072049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the comma-shaped body is generated and organized. The comma-shaped body is the precursor structure to the S-shaped body that contributes to the morphogenesis of the nephron.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"nephron morphogenesis","termid":"GO:0072028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"comma-shaped body morphogenesis","termid":"GO:0072049"}


id: PBO:0065338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteinase 3","termid":"PBO:0065338"}


id: PBO:0027854
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_vacuolar_membrane","termid":"PBO:0027854"}


id: MONDO:0021971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Baraitser Rodeck garner syndrome (obsolete MONDO:0021971)","termid":"MONDO:0021971","xrefs":{"Monarch":{"xref_id":"0021971"}}}


id: GO:0061592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipid scrambling process that results in the appearance of phosphatidylserine on the surface of osteoblasts, and contributes to bone mineralization.","definition_xrefs":["PMID:22936354","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane phospholipid scrambling","termid":"GO:0017121"},{"relation_name":"part_of","term_name":"bone mineralization","termid":"GO:0030282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"phosphatidylserine exposure on osteoblast involved in bone mineralization","termid":"GO:0061592"}


id: GO:0140938
data:
  {"annotated_genes":["SJAG_00769","SJAG_01193","SJAG_02873","SJAG_03487","SJAG_04574"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140954"},{"annotations":[113509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046975"},{"annotations":[94969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140955"},{"annotations":[115993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062122"},{"annotations":[116037,113510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042800"},{"annotations":[116038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140999"},{"annotations":[109984,109983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046974"},{"annotations":[109985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140948"},{"annotations":[109986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140949"},{"annotations":[109987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140947"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a histone H3 = S-adenosyl-L-homocysteine + a methylated histone H3. Histone methylation generally occurs on either an arginine or a lysine residue.","definition_xrefs":["PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone methyltransferase activity","termid":"GO:0042054"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00769":null,"SJAG_01193":null,"SJAG_02873":null,"SJAG_03487":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0008276","GO:0016741","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"histone H3 methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5649764","Reactome:R-HSA-5649800","Reactome:R-HSA-5159245","Reactome:R-HSA-5638157","Reactome:R-HSA-5649801","Reactome:R-HSA-5661117","Reactome:R-HSA-8936608","Reactome:R-HSA-3788745","Reactome:R-HSA-8936584","Reactome:R-HSA-3788748","Reactome:R-HSA-5634729","Reactome:R-HSA-8937113","Reactome:R-HSA-5634750","Reactome:R-HSA-5634802","Reactome:R-HSA-5637686","Reactome:R-HSA-5638333","Reactome:R-HSA-5638332","Reactome:R-HSA-5638141","Reactome:R-HSA-5649802","Reactome:R-HSA-9844006","Reactome:R-HSA-9844057","Reactome:R-HSA-4827383","Reactome:R-HSA-8937022","Reactome:R-HSA-4827382","Reactome:R-HSA-5649799","Reactome:R-HSA-9842833","Reactome:R-HSA-5244692","Reactome:R-HSA-5205799"],"synonyms":[{"name":"histone H3 methylase activity","type":"exact"},{"name":"histone H3 methylation","type":"related"}],"termid":"GO:0140938","terms_by_termid":{"GO:0042800":null,"GO:0046974":null,"GO:0046975":null,"GO:0062122":null,"GO:0140947":null,"GO:0140948":null,"GO:0140949":null,"GO:0140954":null,"GO:0140955":null,"GO:0140999":null}}


id: MONDO:0009543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Prominent glabella B microcephaly B hypogenitalism is a very rare syndrome described in two sibs and characterized by prenatal onset of growth deficiency, microcephaly, hypoplastic genitalia, and birth onset of convulsions.","definition_xrefs":["Orphanet:2083"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prominent glabella-microcephaly-hypogenitalism syndrome","secondary_identifiers":["GARD:144","MESH:C537714","UMLS:C0796024","OMIM:247990","MEDGEN:162900"],"synonyms":[{"name":"Mac Dermot Winter syndrome","type":"related"},{"name":"MacDermot-Winter syndrome","type":"exact"},{"name":"prominent glabella microcephaly hypogenitalism","type":"related"}],"termid":"MONDO:0009543","xrefs":{"Monarch":{"xref_id":"0009543"}}}


id: GO:1905611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of mRNA cap binding.","definition_xrefs":["GO_REF:0000059","GOC:bc","PMID:23409027","GOC:PARL","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mRNA cap binding (obsolete GO:1905611)","synonyms":[{"name":"down regulation of mRNA cap binding","type":"exact"},{"name":"down-regulation of mRNA cap binding","type":"exact"},{"name":"downregulation of mRNA cap binding","type":"exact"},{"name":"inhibition of mRNA cap binding","type":"narrow"}],"termid":"GO:1905611"}


id: PBO:0050786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 2C","termid":"PBO:0050786"}


id: GO:0019589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glycerol into propane-1,3-diol and water.","definition_xrefs":["MetaCyc:GOLPDLCAT-PWY","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaerobic glycerol catabolic process","termid":"GO:0019588"},{"relation_name":"is_a","term_name":"propanediol metabolic process","termid":"GO:0051143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0006091","GO:0044281"],"is_obsolete":false,"name":"anaerobic glycerol catabolic process to propane-1,3-diol","synonyms":[{"name":"glycerol fermentation to 1,3-propanediol","type":"exact"},{"name":"glycerol fermentation to propane-1,3-diol","type":"exact"}],"termid":"GO:0019589"}


id: MONDO:0008482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thoracic malformation","termid":"MONDO:0015929"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sprengel deformity","secondary_identifiers":["MESH:C535802","SCTID:79120002","icd11.foundation:2144522441","GARD:7693","NORD:1736","HP:0000912","MEDGEN:56291","Orphanet:3181","UMLS:C0152438","MedDRA:10010455","OMIM:184400"],"synonyms":[{"name":"Sprengel deformity","type":"exact"},{"name":"Sprengel deformity (disease)","type":"exact"},{"name":"Sprengel's deformity","type":"related"},{"name":"Sprengel's shoulder","type":"related"},{"name":"congenital elevation of the scapula","type":"related"},{"name":"congenital upward displacement of the scapula","type":"related"},{"name":"high scapula","type":"exact"}],"termid":"MONDO:0008482","xrefs":{"Monarch":{"xref_id":"0008482"}}}


id: GO:0016311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of removing one or more phosphoric (ester or anhydride) residues from a molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dephosphorylation","secondary_identifiers":["Wikipedia:Dephosphorylation"],"termid":"GO:0016311"}


id: PBO:0029443
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_abnormal_cell_morphology_(obsolete_FYPO:0002272)","termid":"PBO:0029443"}


id: MONDO:0024495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"general tumor grading characteristic","termid":"MONDO:0024489"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor grade 1 or 2, general grading system","synonyms":[{"name":"grade 1/2","type":"exact"}],"termid":"MONDO:0024495","xrefs":{"Monarch":{"xref_id":"0024495"}}}


id: GO:0009630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orientation of plant parts under the stimulation of gravity.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropism","termid":"GO:0009606"},{"relation_name":"is_a","term_name":"response to gravity","termid":"GO:0009629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gravitropism","secondary_identifiers":["Wikipedia:Gravitropism"],"synonyms":[{"name":"geotropism","type":"exact"}],"termid":"GO:0009630"}


id: GO:0060680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branch forms along the side of a ureteric bud.","definition_xrefs":["GOC:dph","PMID:16916378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral sprouting from an epithelium","termid":"GO:0060601"},{"relation_name":"part_of","term_name":"branching involved in ureteric bud morphogenesis","termid":"GO:0001658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral sprouting involved in ureteric bud morphogenesis","termid":"GO:0060680"}


id: MONDO:0859189
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy, congenital hearing loss, and ovarian insufficiency syndrome","secondary_identifiers":["UMLS:C5561980","MEDGEN:1794190","OMIM:619518"],"termid":"MONDO:0859189","xrefs":{"Monarch":{"xref_id":"0859189"}}}


id: PBO:0034103
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-involved_in_negative_regulation_of","termid":"PBO:0034103"}


id: FYPO:0003291
data:
  {"alleles_by_uniquename":{"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003727"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the glycan moiety of a glycoprotein does not contain galactose residues. In wild-type cells, glycoprotein glycans contain mannose and galactose residues in a 1:1.2 ratio, and the galactose residues are connected by alpha-1,2 linkages.","definition_xrefs":["PMID:9125114","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glycoprotein glycan structure","termid":"FYPO:0003290"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":1,"genotypes_by_uniquename":{"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0002274"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0003290"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0005447","FYPO:0002494","FYPO:0001320","FYPO:0003290"],"is_obsolete":false,"name":"galactose absent from glycoprotein glycan","references_by_uniquename":{"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697"],"single_locus_genotype_uniquenames":["gms1delta"],"synonyms":[{"name":"alpha 1,2-linked galactose residues absent from glycoprotein","type":"exact"},{"name":"galactose absent from glycoprotein oligosaccharide","type":"related"}],"termid":"FYPO:0003291","terms_by_termid":{"FYPO:0003727":null,"FYPO_EXT:0000001":null}}


id: GO:0036149
data:
  {"annotated_genes":["SJAG_03935"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110019],"is_not":false,"summary":null,"term":"GO:0036149"}]},"cv_name":"biological_process","definition":"Remodeling the acyl chains of phosphatidylinositol, through sequential deacylation and re-acylation reactions, to generate phosphatidylinositol containing different types of fatty acid acyl chains.","definition_xrefs":["PMID:18094042","PMID:18772128","GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol metabolic process","termid":"GO:0046488"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03935":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylinositol acyl-chain remodeling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1482922"],"synonyms":[{"name":"phosphatidylinositol acyl-chain remodelling","type":"exact"}],"termid":"GO:0036149","terms_by_termid":{"GO:0036149":null}}


id: PBO:0059531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Cys (UGU/C)","termid":"PBO:0059531"}


id: PBO:0043682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortistatin","termid":"PBO:0043682"}


id: GO:0002689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of leukocyte chemotaxis.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte migration","termid":"GO:0002686"},{"relation_name":"is_a","term_name":"regulation of leukocyte chemotaxis","termid":"GO:0002688"},{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"negatively_regulates","term_name":"leukocyte chemotaxis","termid":"GO:0030595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of leukocyte chemotaxis","synonyms":[{"name":"down regulation of leukocyte chemotaxis","type":"exact"},{"name":"down-regulation of leukocyte chemotaxis","type":"exact"},{"name":"downregulation of leukocyte chemotaxis","type":"exact"},{"name":"inhibition of leukocyte chemotaxis","type":"narrow"},{"name":"negative regulation of immune cell chemotaxis","type":"exact"},{"name":"negative regulation of leucocyte chemotaxis","type":"exact"}],"termid":"GO:0002689"}


id: MONDO:0009624
data:
  {"annotated_genes":["SJAG_01756"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86742],"is_not":false,"summary":null,"term":"MONDO:0009624"}]},"cv_name":"mondo","definition":"An autosomal recessive disorder caused by mutation(s) in the TUBGCP6 gene, encoding gamma-tubulin complex component 6. It is characterized by microcephaly and chorioretinopathy.","definition_xrefs":["NCIT:C129306"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"is_a","term_name":"microcephaly and chorioretinopathy","termid":"MONDO:0000181"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01756":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005328"],"is_obsolete":false,"name":"microcephaly and chorioretinopathy 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16603","DOID:0080105","MEDGEN:480111","OMIM:251270","Orphanet:2518","UMLS:C3278481"],"synonyms":[{"name":"MCCRP1","type":"related"},{"name":"Pseudotoxoplasmosis syndrome","type":"exact"},{"name":"TUBGCP6 microcephaly and chorioretinopathy","type":"exact"},{"name":"autosomal recessive chorioretinopathy-microcephaly syndrome","type":"related"},{"name":"autosomal recessive chorioretinopathy-microcephaly-intellectual disability syndrome","type":"exact"},{"name":"microcephaly and chorioretinopathy 1","type":"exact"},{"name":"microcephaly and chorioretinopathy caused by mutation in TUBGCP6","type":"exact"},{"name":"microcephaly and chorioretinopathy type 1","type":"exact"},{"name":"microcephaly and chorioretinopathy, autosomal recessive, 1","type":"related"},{"name":"microcephaly and chorioretinopathy, autosomal recessive, type 1","type":"exact"}],"termid":"MONDO:0009624","terms_by_termid":{"MONDO:0009624":null},"xrefs":{"Monarch":{"xref_id":"0009624"}}}


id: MONDO:0003001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A radiosensitive malignant germ cell tumor found in the testis (especially undescended), and extragonadal sites (anterior mediastinum and pineal gland). It is characterized by the presence of uniform cells with clear or dense cytoplasm which contains glycogen, and by a large nucleus which contains one or more nucleoli. The neoplastic germ cells form aggregates separated by fibrous septa. The fibrous septa contain chronic inflammatory cells, mainly lymphocytes.","definition_xrefs":["NCIT:C9309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant germ cell tumor","termid":"MONDO:0006290"},{"relation_name":"is_a","term_name":"germinomatous germ cell tumor","termid":"MONDO:0020580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"seminoma","secondary_identifiers":["UMLS:C0036631","MEDGEN:11371","ICDO:9061/3","DOID:4440","ICD9:186.9","MESH:D018239","ONCOTREE:SEM","SCTID:443675005"],"synonyms":[{"name":"seminoma","type":"exact"},{"name":"seminoma, malignant","type":"exact"},{"name":"seminoma, pure","type":"exact"}],"termid":"MONDO:0003001","xrefs":{"Monarch":{"xref_id":"0003001"}}}


id: PBO:0028660
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_complex_binding","termid":"PBO:0028660"}


id: GO:0002737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of plasmacytoid dendritic cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of dendritic cell cytokine production","termid":"GO:0002731"},{"relation_name":"is_a","term_name":"regulation of plasmacytoid dendritic cell cytokine production","termid":"GO:0002736"},{"relation_name":"negatively_regulates","term_name":"plasmacytoid dendritic cell cytokine production","termid":"GO:0002373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of plasmacytoid dendritic cell cytokine production","synonyms":[{"name":"down regulation of plasmacytoid dendritic cell cytokine production","type":"exact"},{"name":"down-regulation of plasmacytoid dendritic cell cytokine production","type":"exact"},{"name":"downregulation of plasmacytoid dendritic cell cytokine production","type":"exact"},{"name":"inhibition of plasmacytoid dendritic cell cytokine production","type":"narrow"}],"termid":"GO:0002737"}


id: PBO:0056844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monoglyceride lipase","termid":"PBO:0056844"}


id: MONDO:0009120
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndromic intestinal malformation characterized by the association of marfanoid habitus with visceral diverticula. It has been reported in four adults and two siblings from a consanguineous marriage in two different publications. Pediatric cases also presented with diaphragmatic hernia. Other connective tissue disorders with visceral diverticula have been reported previously, suggesting a relationship between these two conditions.","definition_xrefs":["Orphanet:2464","PMID:13880014","PMID:8976669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"diverticulosis of bowel, hernia, and retinal detachment","secondary_identifiers":["MESH:C565619","MEDGEN:341729","GARD:3401","UMLS:C1857227","OMIM:223330"],"synonyms":[{"name":"Marphanoid syndrome type De Silva","type":"related"},{"name":"diverticulosis of bowel, hernia, and retinal detachment","type":"exact"},{"name":"marfanoid syndrome, De Silva type","type":"exact"}],"termid":"MONDO:0009120","xrefs":{"Monarch":{"xref_id":"0009120"}}}


id: PBO:0082949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic NAD(+)-dependent protein deacetylase; deacetylation targets are primarily cytoplasmic proteins; member of the silencing information regulator 2 (Sir2) family of NAD(+)-dependent protein deacetylases; modulates nucleolar (rDNA) and telomeric silencing; possesses NAD(+)-dependent histone deacetylase activity in vitro; contains a nuclear export signal (NES); function regulated by its nuclear export","termid":"PBO:0082949"}


id: MONDO:0001014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A slowly progressing leukemia characterized by a clonal (malignant) proliferation of maturing and mature myeloid cells or mature lymphocytes. When the clonal cellular population is composed of myeloid cells, the process is called chronic myelogenous leukemia. When the clonal cellular population is composed of lymphocytes, it is classified as chronic lymphocytic leukemia, hairy cell leukemia, or T-cell large granular lymphocyte leukemia.","definition_xrefs":["NCIT:C3483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukemia","termid":"MONDO:0005059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"chronic leukemia","secondary_identifiers":["SCTID:92812005","DOID:1036","MEDGEN:220905","ICD9:208.10","UMLS:C1279296"],"synonyms":[{"name":"CLL","type":"related"},{"name":"CML","type":"related"},{"name":"adult chronic leukaemia","type":"related"},{"name":"adult chronic leukemia","type":"related"},{"name":"chronic leukaemia (disease)","type":"exact"},{"name":"chronic leukemia","type":"exact"},{"name":"chronic leukemia (disease)","type":"exact"},{"name":"leukaemia (disease), chronic","type":"exact"},{"name":"leukemia (disease), chronic","type":"exact"}],"termid":"MONDO:0001014","xrefs":{"Monarch":{"xref_id":"0001014"}}}


id: MONDO:1010217
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Schwannomatosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis, non-human animal","termid":"MONDO:1011310"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"},{"relation_name":"is_a","term_name":"neurofibromatosis, non-human animal","termid":"MONDO:1011437"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schwannomatosis, non-human animal","secondary_identifiers":["OMIA:001963"],"termid":"MONDO:1010217","xrefs":{"Monarch":{"xref_id":"1010217"}}}


id: MONDO:0004843
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Involuntary movements of the eyeballs. The presence or absence of nystagmus is often used in the diagnosis of a variety of neurological and visual disorders.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ocular motility disease","termid":"MONDO:0001584"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pathologic nystagmus","secondary_identifiers":["DOID:9650","ICD9:379.50","MESH:D009759","MEDGEN:45166","UMLS:C0028738"],"termid":"MONDO:0004843","xrefs":{"Monarch":{"xref_id":"0004843"}}}


id: MONDO:0001658
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sporadic enlargement of the thyroid gland that is not associated with changes in thyroid function or malignancy.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"goiter","termid":"MONDO:0005397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nontoxic goiter","secondary_identifiers":["DOID:13195","MEDGEN:113172","NCIT:C35271","SCTID:267369002","UMLS:C0221777"],"synonyms":[{"name":"Nodule-thyroid, non tox","type":"exact"},{"name":"euthyroid goiter","type":"exact"},{"name":"euthyroid goitre","type":"exact"},{"name":"goiter, non-toxic","type":"exact"},{"name":"non-toxic goiter","type":"exact"},{"name":"non-toxic goitre","type":"exact"},{"name":"non-toxic simple goiter","type":"exact"},{"name":"non-toxic simple goitre","type":"exact"},{"name":"nontoxic goiter","type":"exact"}],"termid":"MONDO:0001658","xrefs":{"Monarch":{"xref_id":"0001658"}}}


id: GO:0102564
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id: GO:0035296
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the diameter of a tube.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tube size","termid":"GO:0035150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tube diameter","termid":"GO:0035296"}


id: GO:0047494
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id: GO:0060861
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of floral organ shedding, the controlled shedding of floral organs.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of floral organ abscission","termid":"GO:0060860"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"floral organ abscission","termid":"GO:0010227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of floral organ abscission","termid":"GO:0060861"}


id: GO:0042054
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id: GO:0141218
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id: FYPO:0000237
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype in which regulation of translation in response to nitrogen starvation is abnormal. Translation may be down-regulated to a greater extent than normal, and may not be restored to normal levels upon prolonged nitrogen starvation.","definition_xrefs":["PomBase:mah","PMID:18065650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to nitrogen starvation","termid":"FYPO:0000152"},{"relation_name":"is_a","term_name":"abnormal regulation of translation in response to stress","termid":"FYPO:0000263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000298","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"abnormal regulation of translation in response to nitrogen starvation","synonyms":[{"name":"abnormal regulation of translation in response to nitrogen depletion","type":"exact"},{"name":"abnormal regulation of translation in response to nitrogen deprivation","type":"exact"},{"name":"abnormal translational regulation in response to nitrogen starvation","type":"exact"},{"name":"defective in recovery of translation during nitrogen starvation","type":"related"}],"termid":"FYPO:0000237"}


id: SO:0000449
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id: GO:0044740
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that negatively regulates the sensory perception of pain in a different organism.","definition_xrefs":["GOC:jl","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nervous system process","termid":"GO:0031645"},{"relation_name":"is_a","term_name":"modulation of sensory perception of pain in another organism","termid":"GO:0044465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sensory perception of pain in another organism","synonyms":[{"name":"inhibition of sensory perception of pain in another organism","type":"exact"},{"name":"negative regulation of sensory perception of pain in other organism","type":"exact"}],"termid":"GO:0044740"}


id: FYPO:0005255
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id: MONDO:0000425
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form of disease.","definition_xrefs":["MONDO:patterns/x_linked"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary 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disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1138434","MEDGEN:222910","DOID:0050735","ICD9:799.89","MESH:D040181","NCIT:C85865","SCTID:128430005"],"synonyms":[{"name":"X linked genetic diseases","type":"related"},{"name":"X-linked disease or disorder","type":"exact"},{"name":"X-linked genetic disease","type":"related"},{"name":"X-linked genetic diseases","type":"related"},{"name":"X-linked hereditary disease","type":"exact"},{"name":"X-linked hereditary disorder","type":"exact"},{"name":"X-linked inherited disease","type":"exact"},{"name":"X-linked inherited disorder","type":"exact"},{"name":"disease or disorder, X-linked","type":"exact"},{"name":"disease, X-linked","type":"exact"},{"name":"disease, X-linked genetic","type":"related"},{"name":"diseases, X-linked genetic","type":"related"},{"name":"genetic disease, X-linked","type":"related"},{"name":"genetic diseases, X chromosome linked","type":"related"},{"name":"genetic diseases, X linked","type":"related"},{"name":"genetic diseases, X-chromosome linked","type":"related"}],"termid":"MONDO:0000425","terms_by_termid":{"MONDO:0010258":null,"MONDO:0010286":null,"MONDO:0010294":null,"MONDO:0010306":null,"MONDO:0010313":null,"MONDO:0010333":null,"MONDO:0010338":null,"MONDO:0010355":null,"MONDO:0010361":null,"MONDO:0010378":null,"MONDO:0010398":null,"MONDO:0010407":null,"MONDO:0010420":null,"MONDO:0010447":null,"MONDO:0010451":null,"MONDO:0010457":null,"MONDO:0010461":null,"MONDO:0010477":null,"MONDO:0010479":null,"MONDO:0010485":null,"MONDO:0010496":null,"MONDO:0010497":null,"MONDO:0010500":null,"MONDO:0010518":null,"MONDO:0010524":null,"MONDO:0010547":null,"MONDO:0010557":null,"MONDO:0010561":null,"MONDO:0010574":null,"MONDO:0010577":null,"MONDO:0010584":null,"MONDO:0010590":null,"MONDO:0010655":null,"MONDO:0010659":null,"MONDO:0010660":null,"MONDO:0010665":null,"MONDO:0010671":null,"MONDO:0010683":null,"MONDO:0010689":null,"MONDO:0010699":null,"MONDO:0010737":null,"MONDO:0015601":null,"MONDO:0020721":null,"MONDO:0026723":null,"MONDO:0026763":null,"MONDO:0030908":null,"MONDO:0030909":null,"MONDO:0049222":null,"MONDO:0958200":null},"xrefs":{"Monarch":{"xref_id":"0000425"}}}


id: PBO:0028093
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cytochrome-c_oxidase_activity","termid":"PBO:0028093"}


id: MONDO:1010785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Incontinentia pigmenti that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incontinentia pigmenti, non-human animal","termid":"MONDO:1010143"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incontinentia pigmenti, horse","secondary_identifiers":["OMIA:001899-9796"],"termid":"MONDO:1010785","xrefs":{"Monarch":{"xref_id":"1010785"}}}


id: GO:0009860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Growth of pollen via tip extension of the intine wall.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cell tip growth","termid":"GO:0009932"},{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"part_of","term_name":"pollen tube development","termid":"GO:0048868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen tube growth","termid":"GO:0009860"}


id: MONDO:1010898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neurological disease characterized by ataxia, hypermetria, wide-base stance, and strabismus that occurs in cattle due to a sphingomyelinase deficiency resulting in the accumulation of sphingomyelin in neurons and macrophages.","definition_xrefs":["PMID:18424834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, cattle","termid":"MONDO:1010862"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelinase deficiency, cattle","secondary_identifiers":["OMIA:001795-9913"],"synonyms":[{"name":"Niemann-Pick disease, type A, cattle","type":"related"}],"termid":"MONDO:1010898","xrefs":{"Monarch":{"xref_id":"1010898"}}}


id: MONDO:0002881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mixed epithelial and mesenchymal neoplasm that arises from the vagina and is characterized by the presence of a malignant mesenchymal component and a benign or atypical mullerian-type epithelial component.","definition_xrefs":["NCIT:C40277"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"vaginal carcinosarcoma","termid":"MONDO:0006488"},{"relation_name":"is_a","term_name":"vaginal cancer","termid":"MONDO:0001402"},{"relation_name":"is_a","term_name":"adenosarcoma","termid":"MONDO:0005636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vaginal adenosarcoma","secondary_identifiers":["DOID:4117","MEDGEN:274378","UMLS:C1519914"],"synonyms":[{"name":"adenosarcoma of vagina","type":"exact"},{"name":"vagina adenosarcoma","type":"exact"},{"name":"vaginal Mullerian adenosarcoma","type":"exact"},{"name":"vaginal Müllerian adenosarcoma","type":"exact"},{"name":"vaginal adenosarcoma","type":"exact"}],"termid":"MONDO:0002881","xrefs":{"Monarch":{"xref_id":"0002881"}}}


id: GO:0061274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mesonephric distal tubule over time, from its formation to the mature structure. The mesonephric distal tubule is a mesonephric nephron tubule that begins at the terminal segment of the proximal tubule and ends at the mesonephric connecting tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric nephron tubule development","termid":"GO:0061242"},{"relation_name":"is_a","term_name":"distal tubule development","termid":"GO:0072017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric distal tubule development","termid":"GO:0061274"}


id: PBO:0062148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 21","termid":"PBO:0062148"}


id: PBO:0077925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane phosphatase with tensin homology","termid":"PBO:0077925"}


id: PBO:0054198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1574","termid":"PBO:0054198"}


id: GO:0099616
data:
  {"annotated_genes":["SJAG_00852","SJAG_01249"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99950,103263],"is_not":false,"summary":null,"term":"GO:0099616"}]},"cv_name":"cellular_component","definition":"The component of the matrix side of the mitochondrial inner membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of mitochondrial inner membrane","termid":"GO:0031314"},{"relation_name":"part_of","term_name":"matrix side of mitochondrial inner membrane","termid":"GO:0099617"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00852":null,"SJAG_01249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005575","GO:0005739","GO:0005737"],"is_obsolete":false,"name":"extrinsic component of matrix side of mitochondrial inner membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099616","terms_by_termid":{"GO:0099616":null}}


id: PBO:0059282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L40","termid":"PBO:0059282"}


id: GO:0030749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + loganate = S-adenosyl-L-homocysteine + loganin.","definition_xrefs":["EC:2.1.1.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"loganate O-methyltransferase activity","secondary_identifiers":["RHEA:12508","MetaCyc:LOGANATE-O-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:loganate 11-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:loganic acid methyltransferase activity","type":"related"},{"name":"loganate methyltransferase activity","type":"related"}],"termid":"GO:0030749"}


id: PBO:0072854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretion associated Ras related GTPase 1A pseudogene 4","termid":"PBO:0072854"}


id: PBO:0029169
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_plasma_membrane","termid":"PBO:0029169"}


id: MONDO:0021351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the neck.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplasm of neck","secondary_identifiers":["ICD9:239.89","MEDGEN:10279","UMLS:C0027533","NCIT:C3260","SCTID:126635000"],"synonyms":[{"name":"neck neoplasm","type":"exact"},{"name":"neck neoplasm (disease)","type":"exact"},{"name":"neck neoplasms (Including All pharyngeal related neoplasms)","type":"exact"},{"name":"neck tumor","type":"exact"},{"name":"neck tumour","type":"exact"},{"name":"neoplasm of neck","type":"exact"},{"name":"neoplasm of the neck","type":"exact"},{"name":"tumor of neck","type":"exact"},{"name":"tumor of the neck","type":"exact"},{"name":"tumour of neck","type":"exact"},{"name":"tumour of the neck","type":"exact"}],"termid":"MONDO:0021351","xrefs":{"Monarch":{"xref_id":"0021351"}}}


id: GO:0010048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of thermal induction in plants in which flowering is promoted by exposure to low temperatures.","definition_xrefs":["ISBN:0521591392","GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cold","termid":"GO:0009409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vernalization response","termid":"GO:0010048"}


id: GO:0052903
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N(1)-acetylspermine + O2 = 3-acetamidopropanal + H2O2 + spermidine. Also converts N(1)-acetylspermidine to putrescine.","definition_xrefs":["EC:1.5.3.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine oxidase activity","termid":"GO:0046592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"N(1)-acetylpolyamine oxidase (3-acetamidopropanal-forming) activity","secondary_identifiers":["KEGG_REACTION:R03899","MetaCyc:RXN-12090"],"synonyms":[{"name":"N(1)-acetylpolyamine oxidase activity","type":"broad"},{"name":"N1-acetylspermidine:oxygen oxidoreductase (3-acetamidopropanal-forming) activity","type":"narrow"},{"name":"N1-acetylspermine:oxygen oxidoreductase (3-acetamidopropanal-forming) activity","type":"narrow"},{"name":"https://github.com/geneontology/go-ontology/issues/28070","type":"narrow"}],"termid":"GO:0052903"}


id: PBO:0039593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anoctamin 10","termid":"PBO:0039593"}


id: PBO:0080821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XXYLT1 antisense RNA 2","termid":"PBO:0080821"}


id: GO:2000445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of toll-like receptor 21 signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of toll-like receptor signaling pathway","termid":"GO:0034123"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor 21 signaling pathway","termid":"GO:2000443"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 21 signaling pathway","termid":"GO:0035682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 21 signaling pathway","synonyms":[{"name":"positive regulation of TLR21 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 21 signalling pathway","type":"exact"}],"termid":"GO:2000445"}


id: PBO:0068869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 109, pseudogene","termid":"PBO:0068869"}


id: GO:0042285
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a xylosyl group to an acceptor molecule, typically another carbohydrate or a lipid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"xylosyltransferase activity","termid":"GO:0042285"}


id: GO:0090629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the synthesis of DNA from a template strand in a net 3' to 5' direction is started.","definition_xrefs":["GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"lagging strand elongation","termid":"GO:0006273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006260","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"lagging strand initiation","termid":"GO:0090629"}


id: GO:0040036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fibroblast growth factor receptor signaling pathway activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of cellular response to growth factor stimulus","termid":"GO:0090287"},{"relation_name":"regulates","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of fibroblast growth factor receptor signaling pathway","synonyms":[{"name":"regulation of FGF receptor signaling pathway","type":"exact"},{"name":"regulation of FGF receptor signalling pathway","type":"exact"},{"name":"regulation of FGFR signaling pathway","type":"exact"}],"termid":"GO:0040036"}


id: MONDO:1010344
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Peters anomaly that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peters anomaly, non-human animal","secondary_identifiers":["OMIA:001914"],"termid":"MONDO:1010344","xrefs":{"Monarch":{"xref_id":"1010344"}}}


id: GO:0044051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance released via cytolysis of symbiont cells. Cytolysis is the rupture of cell membranes and the loss of cytoplasm. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via substance released by symbiont cytolysis (obsolete GO:0044051)","synonyms":[{"name":"interaction with host via substance released by cytolysis of symbiont","type":"exact"}],"termid":"GO:0044051"}


id: FYPO:0005652
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the spindle is abnormal during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"},{"relation_name":"is_a","term_name":"abnormal spindle morphology","termid":"FYPO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0001985","FYPO:0005447","FYPO:0000120","FYPO:0000054","FYPO:0000002"],"is_obsolete":false,"name":"abnormal spindle morphology during meiosis I","synonyms":[{"name":"abnormal spindle morphology during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0005652"}


id: MONDO:0005518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition consisting of possessing the internal reproductive organs of one sex while exhibiting some of the secondary sex characteristics of the opposite sex.","definition_xrefs":["NCIT:C124575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indeterminate sex and/or pseudohermaphroditism","termid":"MONDO:0024665"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudohermaphroditism","secondary_identifiers":["UMLS:C0033804","Wikipedia:Pseudohermaphroditism","SCTID:75164001","ICD10CM:Q56.3","MEDGEN:10991","ICD10CM:Q56","EFO:0005579","DOID:3765","ICD9:752.7"],"synonyms":[{"name":"indeterminate sex and pseudohermaphroditism","type":"related"}],"termid":"MONDO:0005518","xrefs":{"Monarch":{"xref_id":"0005518"}}}


id: GO:0052222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a lower concentration of environmental oxygen on, within or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative aerotaxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052222)","synonyms":[{"name":"negative aerotaxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"negative aerotaxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052222"}


id: PBO:0075643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sprouty RTK signaling antagonist 2","termid":"PBO:0075643"}


id: PR:P33075
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adenylate kinase 2, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23359:SF22","PRO:DNx","OMA:SCHPO00933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.03","secondary_identifiers":["UniProtKB:P33075"],"synonyms":[{"name":"ATP-AMP transphosphorylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ATP:AMP phosphotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-AK2","type":"exact"},{"name":"adenylate kinase cytosolic and mitochondrial (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"adenylate monophosphate kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P33075"}


id: PBO:0078785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 9-2","termid":"PBO:0078785"}


id: GO:0019873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tellurium sensitivity/resistance (obsolete GO:0019873)","synonyms":[{"name":"tellurium sensitivity/resistance","type":"exact"}],"termid":"GO:0019873"}


id: PBO:0076333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 2","termid":"PBO:0076333"}


id: PBO:0060973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFYC antisense RNA 1","termid":"PBO:0060973"}


id: PR:O94425
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC660.05 gene.","definition_xrefs":["UniProtKB:O94425","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain-containing protein C660.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC660.05","synonyms":[{"name":"Spom972h-SPBC660.05","type":"exact"}],"termid":"PR:O94425"}


id: PBO:0060013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 1","termid":"PBO:0060013"}


id: PBO:0068004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 306","termid":"PBO:0068004"}


id: PBO:0055585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3021","termid":"PBO:0055585"}


id: MONDO:1012541
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic hypercalciuria, non-human animal","termid":"MONDO:1011917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic hypercalciuria, dog","secondary_identifiers":["OMIA:002384-9615"],"termid":"MONDO:1012541","xrefs":{"Monarch":{"xref_id":"1012541"}}}


id: RO:0002083
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"before_or_simultaneous_with","termid":"RO:0002081"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"before","termid":"RO:0002083"}


id: GO:0046694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the use of stored sperm from the first-mating male is inhibited by the seminal fluid of subsequently mating males.","definition_xrefs":["PMID:10440373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sperm competition","termid":"GO:0046692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sperm incapacitation","termid":"GO:0046694"}


id: PBO:0063462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor D","termid":"PBO:0063462"}


id: PBO:0013231
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curator_email","termid":"PBO:0013231"}


id: MONDO:0015619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A urogenital tract malformation that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic urogenital tract malformation (obsolete MONDO:0015619)","secondary_identifiers":["Orphanet:165704"],"synonyms":[{"name":"isolated urogenital tract malformation","type":"exact"},{"name":"nonsyndromic urogenital tract malformation","type":"exact"}],"termid":"MONDO:0015619","xrefs":{"Monarch":{"xref_id":"0015619"}}}


id: MONDO:0016274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare cervical cancer.","gene_count":0,"genotype_count":0,"name":"obsolete rare cancer of cervix uteri (obsolete MONDO:0016274)","secondary_identifiers":["Orphanet:213761"],"synonyms":[{"name":"rare cervical cancer","type":"exact"},{"name":"rare cervical malignant tumor","type":"exact"},{"name":"rare malignant tumor of cervix uteri","type":"exact"}],"termid":"MONDO:0016274","xrefs":{"Monarch":{"xref_id":"0016274"}}}


id: PBO:0034762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clathrin light chain Clc1","termid":"PBO:0034762"}


id: PBO:0074634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 28","termid":"PBO:0074634"}


id: GO:0120246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an acetylenic compound, any compound which contains a carbon-carbon triple bond (aka C#C).","definition_xrefs":["DOI:10.1007/978-1-4615-4913-0_3","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acetylenic compound metabolic process","synonyms":[{"name":"alkyne substituted compound metabolic process","type":"exact"},{"name":"alkyne substituted compound metabolism","type":"exact"}],"termid":"GO:0120246"}


id: FYPO:0001399
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the mitotic spindle is normal (i.e. indistinguishable from wild type) with respect to structure, composition, location, and orientation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"},{"relation_name":"is_a","term_name":"normal spindle","termid":"FYPO:0004568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic spindle","synonyms":[{"name":"normal mitotic spindle during vegetative growth","type":"exact"},{"name":"normal spindle during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001399"}


id: PBO:0110384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3121","termid":"PBO:0110384"}


id: MONDO:1011668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perosomus elumbis, non-human animal","secondary_identifiers":["OMIA:000789"],"termid":"MONDO:1011668","xrefs":{"Monarch":{"xref_id":"1011668"}}}


id: PBO:0085314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylglycerolphosphate synthase; catalyzes the synthesis of phosphatidylglycerolphosphate from CDP-diacylglycerol and sn-glycerol 3-phosphate in the first committed and rate-limiting step of cardiolipin biosynthesis","termid":"PBO:0085314"}


id: PBO:0091813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent glycolaldehyde/furfural/butyraldehyde/propylaldehydealdehyde reductase","termid":"PBO:0091813"}


id: PBO:0068666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 47, pseudogene","termid":"PBO:0068666"}


id: PBO:0043449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2 pseudogene 10","termid":"PBO:0043449"}


id: FYPO:0008222
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed during the G2/M phase of the mitotic cell cycle in which monomethylation of lysine at position 20 of histone H4 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:27268234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H4-K20 monomethylation during vegetative growth","termid":"FYPO:0004220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H4-K20 monomethylation during mitotic G2/M phase","termid":"FYPO:0008222"}


id: GO:0018891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cyclohexanol, the monohydroxy derivative of cyclohexane. It is used as a solvent and blending agent.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cyclohexanol metabolic process","secondary_identifiers":["UM-BBD_pathwayID:chx"],"synonyms":[{"name":"cyclohexanol metabolism","type":"exact"}],"termid":"GO:0018891"}


id: FYPO:0004697
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 1,2-dioctanoyl-sn-glycerol (DiC8 DAG). Cells stop growing (and may die) at a concentration of 1,2-dioctanoyl-sn-glycerol that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to 1,2-dioctanoyl-sn-glycerol","synonyms":[{"name":"hypersensitive to 1,2-dioctanoyl-sn-glycerol","type":"exact"},{"name":"sensitive to 1,2-dioctanoyl-sn-glycerol during mitotic cell cycle","type":"related"},{"name":"sensitive to 1,2-dioctanoyl-sn-glycerol during vegetative growth","type":"exact"},{"name":"sensitive to DiC8 DAG","type":"exact"}],"termid":"FYPO:0004697"}


id: MONDO:0020669
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the paranasal sinuses.","definition_xrefs":["NCIT:C7487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system cancer","termid":"MONDO:0000376"},{"relation_name":"is_a","term_name":"sensory system cancer","termid":"MONDO:0000649"},{"relation_name":"is_a","term_name":"skull cancer","termid":"MONDO:0002132"},{"relation_name":"is_a","term_name":"paranasal sinus neoplasm","termid":"MONDO:0005289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"paranasal sinus cancer","secondary_identifiers":["MEDGEN:56305","UMLS:C0153474"],"synonyms":[{"name":"malignant accessory sinus neoplasm","type":"exact"},{"name":"malignant accessory sinus tumor","type":"exact"},{"name":"malignant accessory sinus tumour","type":"exact"},{"name":"malignant neoplasm of accessory sinus","type":"exact"},{"name":"malignant neoplasm of paranasal sinus","type":"exact"},{"name":"malignant neoplasm of the accessory sinus","type":"exact"},{"name":"malignant neoplasm of the paranasal sinus","type":"exact"},{"name":"malignant paranasal sinus neoplasm","type":"exact"},{"name":"malignant paranasal sinus tumor","type":"exact"},{"name":"malignant paranasal sinus tumour","type":"exact"},{"name":"malignant tumor of accessory sinus","type":"exact"},{"name":"malignant tumor of paranasal sinus","type":"exact"},{"name":"malignant tumor of the accessory sinus","type":"exact"},{"name":"malignant tumor of the paranasal sinus","type":"exact"},{"name":"malignant tumour of accessory sinus","type":"exact"},{"name":"malignant tumour of paranasal sinus","type":"exact"},{"name":"malignant tumour of the accessory sinus","type":"exact"},{"name":"malignant tumour of the paranasal sinus","type":"exact"}],"termid":"MONDO:0020669","xrefs":{"Monarch":{"xref_id":"0020669"}}}


id: PBO:0004386
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"after human IQWD1","termid":"PBO:0004386"}


id: GO:0030247
data:
  {"annotated_genes":["SJAG_00981","SJAG_00667","SJAG_03535"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99648],"is_not":false,"summary":null,"term":"GO:0030247"},{"annotations":[95190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030248"},{"annotations":[118018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001065"}]},"cv_name":"molecular_function","definition":"Binding to a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate binding","termid":"GO:0030246"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_00981":null,"SJAG_03535":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"polysaccharide binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0002506"],"synonyms":[{"name":"polysaccharide assembly with MHC class II protein complex","type":"narrow"}],"termid":"GO:0030247","terms_by_termid":{"GO:0030247":null,"GO:0030248":null,"GO:2001065":null}}


id: GO:0102075
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: OPC4-3-hydroxyacyl-CoA = OPC4-trans-2-enoyl-CoA + H2O.","definition_xrefs":["GOC:pz","EC:4.2.1.17"],"gene_count":0,"genotype_count":0,"name":"obsolete OPC4-trans-2-enoyl-CoA hydratase activity (obsolete GO:0102075)","termid":"GO:0102075"}


id: MONDO:0006923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the family bacillaceae.","definition_xrefs":["MESH:D016863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gram-positive bacterial infections","termid":"MONDO:0021679"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bacillaceae infectious disease","secondary_identifiers":["MEDGEN:39271","UMLS:C0085389"],"synonyms":[{"name":"Bacillaceae caused disease or disorder","type":"exact"},{"name":"Bacillaceae disease or disorder","type":"exact"},{"name":"Bacillaceae infection","type":"related"},{"name":"infection, Bacillaceae","type":"related"},{"name":"infections, Bacillaceae","type":"related"}],"termid":"MONDO:0006923","xrefs":{"Monarch":{"xref_id":"0006923"}}}


id: PBO:0065048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B pseudogene 2","termid":"PBO:0065048"}


id: FYPO:0000701
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype in which caffeine does not override the DNA damage checkpoint (as it does in wild type cells), allowing mitotic cell cycle arrest to occur.","definition_xrefs":["PMID:10224243","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to caffeine","termid":"FYPO:0000207"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle checkpoint","termid":"FYPO:0001704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000298","FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abolished DNA damage checkpoint override in response to caffeine","synonyms":[{"name":"DNA damage checkpoint override in response to caffeine abolished","type":"exact"},{"name":"DNA damage checkpoint override in response to caffeine abolished during vegetative growth","type":"exact"},{"name":"abolished DNA damage checkpoint override in response to caffeine during mitotic cell cycle","type":"related"},{"name":"caffeine-mediated DNA damage checkpoint override abolished","type":"exact"}],"termid":"FYPO:0000701"}


id: MONDO:0007525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arthrochalasia Ehlers-Danlos syndrome (aEDS) is an inherited connective tissue disorder that is caused by defects in a protein called collagen. Common symptoms include severe joint hypermobility ; congenital hip dislocation; fragile, hyperextensible skin; hypotonia ; and kyphoscoliosis (kyphosis and scoliosis). EDS, arthrochalasia type is caused by changes (mutations) in the COL1A1 gene or the COL1A2 gene and is inherited in an autosomal dominant manner. Treatment and management is focused on preventing serious complications and relieving associated signs and symptoms.","definition_xrefs":["GARD:0002084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, arthrochalasia type","secondary_identifiers":["Orphanet:1899","NANDO:1200650","NANDO:2201260","NCIT:C125701","OMIM:130060","DOID:0080727","UMLS:C4551623","MESH:C562625","MEDGEN:1645042","GARD:2084","SCTID:4170004"],"synonyms":[{"name":"AEDS","type":"related"},{"name":"EDS 7A","type":"narrow"},{"name":"EDS 7B","type":"narrow"},{"name":"EDS VII","type":"exact"},{"name":"EDS VII, mutant procollagen type","type":"related"},{"name":"EDS7A (formerly)","type":"related"},{"name":"EDSARTH1","type":"related"},{"name":"Ehlers-Danlos syndrome type 7","type":"exact"},{"name":"Ehlers-Danlos syndrome type 7A (formerly)","type":"related"},{"name":"Ehlers-Danlos syndrome, arthrochalasia type","type":"exact"},{"name":"Ehlers-Danlos syndrome, arthrochalasia type, 1","type":"related"},{"name":"Ehlers-Danlos syndrome, type VII","type":"exact"},{"name":"Ehlers-Danlos syndrome, type VII, autosomal dominant","type":"related"},{"name":"Ehlers-Danlos syndrome, type VIIA, autosomal dominant","type":"related"},{"name":"arthrochalasia EDS","type":"related"},{"name":"arthrochalasia Ehlers-Danlos syndrome","type":"related"},{"name":"arthrochalasis multiplex congenita","type":"related"}],"termid":"MONDO:0007525","xrefs":{"Monarch":{"xref_id":"0007525"}}}


id: GO:0110101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-valine into the vacuole across the vacuolar membrane.","definition_xrefs":["PMID:20944394","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral amino acid transmembrane import into vacuole","termid":"GO:0034491"},{"relation_name":"is_a","term_name":"L-valine transmembrane transport","termid":"GO:1903785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"L-valine transmembrane import into vacuole","termid":"GO:0110101"}


id: PR:P0CT34
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-1 gene.","definition_xrefs":["UniProtKB:P0CT34","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-1 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.04","synonyms":[{"name":"Spom972h-Tf2-1","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT34"}


id: GO:0018538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the generic reaction: epoxide + CO2 + NAD+ + electron donor = beta-keto acid + NADH + reduced electron donor; the electron donor may be NADPH or a dithiol. This reaction is the ring opening and carboxylation of an epoxide; for example: epoxypropane + CO2 + NAD+ + NADPH = acetoacetate + NADH + NADP+.","definition_xrefs":["PMID:9555888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"epoxide carboxylase activity","termid":"GO:0018538"}


id: MOD:00701
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with a compound containing a nucleotide or a polynucleotide through formation of either a phosphodiester bond, a phosphoramide ester bond, or a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide or nucleic acid modified residue","synonyms":[{"name":"NucRes","type":"exact"}],"termid":"MOD:00701"}


id: PBO:0057571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 766","termid":"PBO:0057571"}


id: GO:0060432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process that results in the creation of defined areas or spaces within the lung, to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung pattern specification process","termid":"GO:0060432"}


id: PBO:0070256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U11 small nuclear","termid":"PBO:0070256"}


id: PBO:0059825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metadherin pseudogene 5","termid":"PBO:0059825"}


id: MONDO:0003434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A glandular epithelial neoplasm that arises from the vagina and shows intestinal differentiation.","definition_xrefs":["NCIT:C40256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginal glandular neoplasm","termid":"MONDO:0001704"},{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaginal adenoma","secondary_identifiers":["MEDGEN:274377","DOID:5402","UMLS:C1519913"],"synonyms":[{"name":"vagina adenoma","type":"exact"},{"name":"vaginal adenoma","type":"exact"}],"termid":"MONDO:0003434","xrefs":{"Monarch":{"xref_id":"0003434"}}}


id: MONDO:0021416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polyp that involves the gall bladder.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyp","termid":"MONDO:0005079"},{"relation_name":"is_a","term_name":"gallbladder disorder","termid":"MONDO:0005281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"polyp of gallbladder","secondary_identifiers":["SCTID:197433003","NCIT:C3909","MEDGEN:120463","icd11.foundation:839854600","UMLS:C0262493"],"synonyms":[{"name":"gall bladder polyp","type":"exact"},{"name":"gallbladder polyp","type":"exact"},{"name":"polyp of the gallbladder","type":"exact"}],"termid":"MONDO:0021416","xrefs":{"Monarch":{"xref_id":"0021416"}}}


id: PBO:0073580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shisa like 2A","termid":"PBO:0073580"}


id: PBO:0085451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Possible chaperone and cysteine protease; required for transcriptional reprogramming during the diauxic shift and for survival in stationary phase; similar to E. coli Hsp31 and S. cerevisiae Hsp31p, Hsp33p, and Sno4p; member of the DJ-1/ThiJ/PfpI superfamily, which includes human DJ-1 involved in Parkinson's disease and cancer","termid":"PBO:0085451"}


id: PR:Q9P6P8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein YIPF6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01130","PRO:DNx","PANTHER:PTHR21236:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein YIP4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.13c","secondary_identifiers":["UniProtKB:Q9P6P8"],"synonyms":[{"name":"Spom972h-YIPF6","type":"exact"},{"name":"YPT-interacting protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6P8"}


id: PBO:0034336
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-synapsed_via_type_Is_bouton_to","termid":"PBO:0034336"}


id: GO:0075192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a symbiont cell is formed, separated from the tip of an infection hypha by a septum. The haustorium mother cell usually contains 2-4 fungal nuclei, and its function is to attach and penetrate the host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of infection structure","termid":"GO:0075015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"haustorium mother cell formation","synonyms":[{"name":"haustorium mother cell formation on or near host","type":"exact"}],"termid":"GO:0075192"}


id: PBO:0028210
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-queuosine_absent_from_tRNA","termid":"PBO:0028210"}


id: FYPO:0007130
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which homoserine O-acetyltransferase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal homoserine O-acetyltransferase activity","termid":"FYPO:0007129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"abolished homoserine O-acetyltransferase activity","synonyms":[{"name":"homoserine O-acetyltransferase activity abolished","type":"exact"}],"termid":"FYPO:0007130"}


id: MONDO:0011746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symphalangism, distal, with microdontia, dental pulp stones, and narrowed zygomatic arch","secondary_identifiers":["MESH:C538148","MEDGEN:376067","UMLS:C1847185","OMIM:606895"],"synonyms":[{"name":"distal symphalangism, hypoplastic carpal bones, microdontia, dental pulp stones, and narrowing of the zygomatic arch","type":"related"},{"name":"symphalangism, distal, with microdontia, dental pulp stones, and narrowed zygomatic arch","type":"exact"}],"termid":"MONDO:0011746","xrefs":{"Monarch":{"xref_id":"0011746"}}}


id: PBO:0048368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA","termid":"PBO:0048368"}


id: GO:0005221
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a monoatomic cation by a channel that opens when intracellular cyclic nucleotide has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly ligand-gated monoatomic ion channel activity","termid":"GO:0005217"},{"relation_name":"is_a","term_name":"cyclic nucleotide-activated monoatomic ion channel activity","termid":"GO:0043855"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"intracellularly cyclic nucleotide-activated monoatomic cation channel activity","secondary_identifiers":["Reactome:R-HSA-2514867"],"synonyms":[{"name":"intracellular cyclic nucleotide activated cation channel activity","type":"broad"},{"name":"intracellular cyclic nucleotide activated monoatomic cation channel activity","type":"exact"},{"name":"intracellular cyclic nucleotide-activated monoatomic cation channel activity","type":"exact"}],"termid":"GO:0005221"}


id: PBO:0088530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [2Fe-2S] cluster assembly protein Isu1","termid":"PBO:0088530"}


id: GO:0042845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycol, a diol in which the two hydroxy groups are on different carbon atoms, usually but not necessarily adjacent.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diol biosynthetic process","termid":"GO:0034312"},{"relation_name":"is_a","term_name":"glycol metabolic process","termid":"GO:0042844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glycol biosynthetic process","synonyms":[{"name":"dihydric alcohol biosynthesis","type":"broad"},{"name":"dihydric alcohol biosynthetic process","type":"broad"},{"name":"glycol anabolism","type":"exact"},{"name":"glycol biosynthesis","type":"exact"},{"name":"glycol formation","type":"exact"},{"name":"glycol synthesis","type":"exact"}],"termid":"GO:0042845"}


id: GO:0009926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The unidirectional movement of auxin in the stem from tip to base along the vector of gravity or basipetally.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin transport","termid":"GO:0060918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"auxin polar transport","termid":"GO:0009926"}


id: PBO:0063044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PALLD antisense RNA 1","termid":"PBO:0063044"}


id: FYPO:0007248
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the duration of cell cycle arrest or delay due to regulation by the mitotic G2 DNA damage checkpoint is shorter than in wild type during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah","PMID:9042863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation during cellular response to ionizing radiation","termid":"FYPO:0003489"},{"relation_name":"is_a","term_name":"decreased duration of mitotic G2 DNA damage checkpoint","termid":"FYPO:0004870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000298","FYPO:0005447","FYPO:0000631","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased duration of mitotic G2 DNA damage checkpoint during cellular response to ionizing radiation","synonyms":[{"name":"advanced mitotic G2 DNA damage checkpoint deactivation during cellular response to ionizing radiation","type":"exact"},{"name":"decreased duration of mitotic G2 DNA damage checkpoint during cellular response to IR","type":"exact"}],"termid":"FYPO:0007248"}


id: GO:0102971
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + phosphinothricin = H+ + coenzyme A(4-) + N-acetylphosphinatothricinate.","definition_xrefs":["GOC:pz","EC:2.3.1.183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"phosphinothricin N-acetyltransferase activity","secondary_identifiers":["MetaCyc:RXN-9382","RHEA:12597"],"termid":"GO:0102971"}


id: SO:0000330
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Region of sequence similarity by descent from a common ancestor.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved_region","secondary_identifiers":["http://en.wikipedia.org/wiki/Conserved_region"],"synonyms":[{"name":"INSDC_feature:misc_feature","type":"broad"},{"name":"INSDC_note:conserved_region","type":"exact"},{"name":"conserved region","type":"exact"}],"termid":"SO:0000330"}


id: PBO:0046512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate rich 6","termid":"PBO:0046512"}


id: PBO:0003744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VII Cox7 (predicted)","termid":"PBO:0003744"}


id: MONDO:0006172
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign melanocytic neoplasm that arises from the conjunctiva.","definition_xrefs":["NCIT:C4551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"},{"relation_name":"is_a","term_name":"benign conjunctival neoplasm","termid":"MONDO:0006105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"conjunctival nevus","secondary_identifiers":["DOID:0050906","EFO:1000205","MEDGEN:83422","SCTID:255006004","UMLS:C0346363"],"synonyms":[{"name":"Nevus of conjunctiva","type":"exact"},{"name":"Nevus of the conjunctiva","type":"exact"},{"name":"conjunctival nevus","type":"exact"}],"termid":"MONDO:0006172","xrefs":{"Monarch":{"xref_id":"0006172"}}}


id: GO:0002586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation of peptide antigen via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002580"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002583"},{"relation_name":"regulates","term_name":"antigen processing and presentation of peptide antigen via MHC class II","termid":"GO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation of peptide antigen via MHC class II","synonyms":[{"name":"regulation of peptide antigen processing and presentation via MHC class II","type":"exact"}],"termid":"GO:0002586"}


id: GO:0106003
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex involved in modulation of signaling and synaptic function in the brain, predominantly in the cerebral cortex and hippocampus. Forms dimers and multimers of amyloid beta peptide 40 and peptide 42 (proteolytic cleavage products of amyloid beta A4 protein, also known as amyloid beta precursor protein). Mostly found in the extracellular space with a proportion occurring as membrane-bound species. Influences synaptic plasticity through various receptors, mediates dendritic spine loss leading to decreased synapse density, inhibits long-term potentiation (LTP) and enhances long-term depression (LTD). Soluble multimeric form is the main pathogenic species linked to Alzheimer's disease.","definition_xrefs":["PMID:18568035","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"amyloid-beta complex","synonyms":[{"name":"ADDL complex","type":"narrow"},{"name":"Abeta complex","type":"exact"},{"name":"Abeta-derived diffusible ligand complex","type":"narrow"},{"name":"amyloid beta complex","type":"exact"},{"name":"amyloid beta dimer","type":"narrow"},{"name":"amyloid beta heterodimer","type":"narrow"},{"name":"amyloid beta heterooligomer","type":"narrow"},{"name":"amyloid beta heterotrimer","type":"narrow"},{"name":"amyloid beta homodimer","type":"narrow"},{"name":"amyloid beta homooligomer","type":"narrow"},{"name":"amyloid beta homotrimer","type":"narrow"},{"name":"amyloid beta oligomer","type":"narrow"},{"name":"amyloid beta trimer","type":"narrow"},{"name":"amyloid-beta protein 40 complex","type":"narrow"},{"name":"amyloid-beta protein 40/42 complex","type":"narrow"},{"name":"amyloid-beta protein 42 complex","type":"narrow"},{"name":"beta amyloid complex","type":"exact"},{"name":"beta-amyloid complex","type":"exact"},{"name":"betaA complex","type":"exact"},{"name":"heterodimer of amyloid beta protein","type":"narrow"},{"name":"heterooligomer of amyloid beta protein","type":"narrow"},{"name":"heterotrimer of amyloid beta protein","type":"narrow"},{"name":"homodimer of amyloid beta protein","type":"narrow"},{"name":"homooligomer of amyloid beta protein","type":"narrow"},{"name":"homotrimer of amyloid beta protein","type":"narrow"}],"termid":"GO:0106003"}


id: GO:1990566
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An inward rectifier potassium channel complex expressed in cardiac muscle, specifically the sinoatrial node and atria, where it controls the heart rate, via regulation by G protein-coupled receptor signaling. In mammals it is composed of GIRK1 (or Kir3.1) and GIRK4 (or Kir3.4) subunits.","definition_xrefs":["PMID:9765280","GOC:ame"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inward rectifier potassium channel complex","termid":"GO:1902937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"I(KACh) inward rectifier potassium channel complex","synonyms":[{"name":"GIRK1-GIRK4 G protein-coupled atrial inward rectifier potassium channel complex","type":"related"},{"name":"Kir3.1-Kir3.4 G protein-coupled atrial inward rectifier potassium channel complex","type":"related"},{"name":"muscarinic potassium channel complex","type":"related"}],"termid":"GO:1990566"}


id: PBO:0034245
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_assembly_of","termid":"PBO:0034245"}


id: GO:0043392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the frequency, rate or extent of DNA binding. DNA binding is any process in which a gene product interacts selectively with DNA (deoxyribonucleic acid).","definition_xrefs":["GOC:dph","GOC:jl","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of binding","termid":"GO:0051100"},{"relation_name":"is_a","term_name":"regulation of DNA binding","termid":"GO:0051101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA binding","synonyms":[{"name":"down regulation of DNA binding","type":"exact"},{"name":"down-regulation of DNA binding","type":"exact"},{"name":"downregulation of DNA binding","type":"exact"},{"name":"inhibition of DNA binding","type":"narrow"}],"termid":"GO:0043392"}


id: GO:1905936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of germ cell proliferation.","definition_xrefs":["PMID:15342467","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"germ cell proliferation","termid":"GO:0036093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of germ cell proliferation","termid":"GO:1905936"}


id: PBO:0091327
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae CMD1","termid":"PBO:0091327"}


id: FYPO:0004590
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which localization of the gamma-tubulin complex to the spindle pole body takes place abnormally after the cell has undergone a normal mitotic nuclear division and passed through the subsequent mitotic interphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body","termid":"FYPO:0004589"},{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype following normal mitosis","termid":"FYPO:0004593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body following normal mitosis","synonyms":[{"name":"abnormal gamma-tubulin complex localisation to mitotic spindle pole body following normal mitosis","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to mitotic SPB following normal mitosis","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body following normal mitosis and interphase","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body following normal mitosis and passage through mitotic G1 phase","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body following normal mitosis during vegetative growth","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body nuclear division following normal mitotic nuclear division","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to spindle pole body following normal nuclear division during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004590"}


id: GO:0036115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a fatty-acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group.","definition_xrefs":["PMID:10578051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA metabolic process","termid":"GO:0035337"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"purine-containing compound catabolic process","termid":"GO:0072523"},{"relation_name":"is_a","term_name":"nucleoside phosphate catabolic process","termid":"GO:1901292"},{"relation_name":"is_a","term_name":"fatty acid derivative catabolic process","termid":"GO:1901569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0055086","GO:0008150","GO:0006790","GO:0044248"],"is_obsolete":false,"name":"fatty-acyl-CoA catabolic process","synonyms":[{"name":"fatty-acyl-CoA breakdown","type":"exact"},{"name":"fatty-acyl-CoA catabolism","type":"exact"},{"name":"fatty-acyl-CoA degradation","type":"exact"}],"termid":"GO:0036115"}


id: PBO:0036035
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H4-K20_trimethylation_during_vegetative_growth","termid":"PBO:0036035"}


id: MONDO:0800455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Birt-Hogg-Dube syndrome caused by the mutations in PRDM10.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Birt-Hogg-Dube syndrome","termid":"MONDO:0800444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Birt-Hogg-Dube syndrome 2","secondary_identifiers":["MEDGEN:1841312","UMLS:C5830676","OMIM:620459"],"synonyms":[{"name":"BHD2","type":"exact"}],"termid":"MONDO:0800455","xrefs":{"Monarch":{"xref_id":"0800455"}}}


id: GO:0048386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of retinoic acid receptor signaling pathway activity.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of retinoic acid receptor signaling pathway","termid":"GO:0048385"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"retinoic acid receptor signaling pathway","termid":"GO:0048384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of retinoic acid receptor signaling pathway","synonyms":[{"name":"activation of retinoic acid receptor signaling pathway","type":"narrow"},{"name":"positive regulation of RAR signaling pathway","type":"exact"},{"name":"positive regulation of retinoic acid receptor signalling pathway","type":"exact"},{"name":"stimulation of retinoic acid receptor signaling pathway","type":"narrow"},{"name":"up regulation of retinoic acid receptor signaling pathway","type":"exact"},{"name":"up-regulation of retinoic acid receptor signaling pathway","type":"exact"},{"name":"upregulation of retinoic acid receptor signaling pathway","type":"exact"}],"termid":"GO:0048386"}


id: PBO:0074826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 22","termid":"PBO:0074826"}


id: PBO:0088140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar protein sorting (VPS) protein; required for cytoplasm to vacuole targeting of proteins; VPS62 has a paralog, TDA6, that arose from the whole genome duplication","termid":"PBO:0088140"}


id: GO:0044826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The insertion into a host genome of viral DNA, usually by the action of an integrase enzyme. Once integrated, the provirus persists in the host cell and serves as a template for the transcription of viral genes and replication of the viral genome, leading to the production of new viruses.","definition_xrefs":["PMID:19091057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral life cycle","termid":"GO:0019058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral genome integration into host DNA","synonyms":[{"name":"viral genome integration","type":"exact"}],"termid":"GO:0044826"}


id: GO:0019482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-alanine (3-aminopropanoic acid), an achiral amino acid and an isomer of alanine. It occurs free (e.g. in brain) and in combination (e.g. in pantothenate) but it is not a constituent of proteins.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"beta-alanine metabolic process","secondary_identifiers":["Wikipedia:Beta-alanine"],"synonyms":[{"name":"beta-alanine metabolism","type":"exact"}],"termid":"GO:0019482"}


id: PBO:0046323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase 1 pseudogene 4","termid":"PBO:0046323"}


id: GO:0070195
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A receptor complex that consists of two identical subunits and binds growth hormone.","definition_xrefs":["GOC:vk","GOC:mah","PMID:11445442","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"growth hormone receptor complex","termid":"GO:0070195"}


id: PATO:0002391
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having three rays or radiating branches.","definition_xrefs":["merriam-webster:merriam-webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triradiate","termid":"PATO:0002391"}


id: MONDO:0008440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by variable spastic paraplegia, bilateral sensorineural deafness, intellectual deficit and progressive nephropathy.","definition_xrefs":["Orphanet:2820"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"autosomal dominant complex spastic paraplegia","termid":"MONDO:0015087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"spastic paraplegia-nephritis-deafness syndrome","secondary_identifiers":["OMIM:182690","MESH:C537937","UMLS:C1866853","MEDGEN:355816","GARD:2342"],"synonyms":[{"name":"Fitzsimmons Walson Mellor syndrome","type":"related"},{"name":"Fitzsimmons-Walson-Mellor syndrome","type":"exact"},{"name":"spastic paraplegia - nephritis - deafness","type":"related"},{"name":"spastic paraplegia, bilateral sensorineural deafness, intellectual retardation, and progressive nephropathy","type":"related"},{"name":"spastic paraplegia, sensorineural deafness, intellectual disability, and progressive nephropathy","type":"related"},{"name":"spastic paraplegia, sensorineural deafness, mental retardation, and progressive nephropathy","type":"related"}],"termid":"MONDO:0008440","xrefs":{"Monarch":{"xref_id":"0008440"}}}


id: FYPO:0001472
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing tacrolimus during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal growth during cellular response to osmotic stress","termid":"FYPO:0001021"},{"relation_name":"is_a","term_name":"normal growth on tacrolimus","termid":"FYPO:0001470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000257","FYPO:0000003","FYPO:0002057","FYPO:0002058","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on tacrolimus during osmotic stress","synonyms":[{"name":"normal cell population growth in presence of tacrolimus during osmotic stress","type":"exact"},{"name":"normal cell population growth on tacrolimus and sorbitol","type":"narrow"},{"name":"normal cell population growth on tacrolimus during osmotic stress","type":"exact"},{"name":"normal cellular response to FK506 during osmotic stress","type":"exact"},{"name":"normal cellular response to tacrolimus and osmotic stress","type":"related"},{"name":"normal cellular response to tacrolimus and sorbitol","type":"related"},{"name":"normal cellular response to tacrolimus during osmotic stress","type":"related"},{"name":"normal vegetative cell population growth on tacrolimus during osmotic stress","type":"exact"}],"termid":"FYPO:0001472"}


id: PBO:0069892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1181, pseudogene","termid":"PBO:0069892"}


id: GO:0021772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the olfactory bulb over time from its initial formation until its mature state. The olfactory bulb coordinates neuronal signaling involved in the perception of smell. It receives input from the sensory neurons and outputs to the olfactory cortex.","definition_xrefs":["ISBN:0878937420","GOC:jid","GOC:dph","GO_REF:0000021","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"olfactory lobe development","termid":"GO:0021988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory bulb development","termid":"GO:0021772"}


id: PBO:0003368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial D-lactate dehydrogenase, cytochrome (predicted)","termid":"PBO:0003368"}


id: GO:0050505
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hydroquinone + UDP-D-glucose = H+ + hydroquinone O-beta-D-glucopyranoside + UDP.","definition_xrefs":["RHEA:12560","EC:2.4.1.218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"hydroquinone glucosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R05769","MetaCyc:2.4.1.218-RXN"],"synonyms":[{"name":"UDP-glucose:hydroquinone-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:hydroquinone-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"arbutin synthase activity","type":"related"},{"name":"hydroquinone:O-glucosyltransferase activity","type":"related"}],"termid":"GO:0050505"}


id: SO:0001090
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Binding involving a covalent bond.","definition_xrefs":["EBIBS:GAR"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001090 covalent_binding_site (obsolete SO:0001090)","synonyms":[{"name":"covalent binding site","type":"exact"}],"termid":"SO:0001090"}


id: MONDO:0013032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any generalized epilepsy in which the cause of the disease is a mutation in the CASR gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, idiopathic generalized, susceptibility to, 8","secondary_identifiers":["MEDGEN:414549","OMIM:612899","DOID:0111322","UMLS:C2752062"],"synonyms":[{"name":"CASR generalised epilepsy","type":"exact"},{"name":"CASR generalized epilepsy","type":"exact"},{"name":"EIG8","type":"related"},{"name":"epilepsy idiopathic generalized, susceptibility to, 8","type":"exact"},{"name":"epilepsy, idiopathic generalized, susceptibility to, 8","type":"exact"},{"name":"epilepsy, idiopathic generalized, susceptibility to, type 8","type":"exact"},{"name":"generalised epilepsy caused by mutation in CASR","type":"exact"},{"name":"generalized epilepsy caused by mutation in CASR","type":"exact"},{"name":"susceptibility to idiopathic generalised epilepsy 8","type":"related"},{"name":"susceptibility to idiopathic generalized epilepsy 8","type":"related"}],"termid":"MONDO:0013032","xrefs":{"Monarch":{"xref_id":"0013032"}}}


id: GO:0042835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BRE RNA element (Bruno response element).","definition_xrefs":["PMID:10893231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"BRE binding","termid":"GO:0042835"}


id: PBO:0087896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; component of the heteromeric Ino2p/Ino4p basic helix-loop-helix transcription activator that binds inositol/choline-responsive elements (ICREs), required for derepression of phospholipid biosynthetic genes in response to inositol depletion; involved in diauxic shift","termid":"PBO:0087896"}


id: GO:1904118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of otic vesicle morphogenesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25677106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"otic vesicle morphogenesis","termid":"GO:0071600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of otic vesicle morphogenesis","termid":"GO:1904118"}


id: PBO:0045870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 beta 2 pseudogene 3","termid":"PBO:0045870"}


id: MONDO:0030989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 53","secondary_identifiers":["MEDGEN:1787013","OMIM:619258","DOID:0112279","UMLS:C5543253"],"synonyms":[{"name":"SPGF53","type":"exact"},{"name":"spermatogenic failure 53","type":"exact"}],"termid":"MONDO:0030989","xrefs":{"Monarch":{"xref_id":"0030989"}}}


id: MONDO:1011903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"renal disease, non-human animal","termid":"MONDO:1011909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal amyloidosis, non-human animal","secondary_identifiers":["OMIA:000040"],"termid":"MONDO:1011903","xrefs":{"Monarch":{"xref_id":"1011903"}}}


id: PBO:0075111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 160","termid":"PBO:0075111"}


id: GO:1900949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of isoprene biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"is_a","term_name":"positive regulation of olefin biosynthetic process","termid":"GO:1900913"},{"relation_name":"is_a","term_name":"positive regulation of isoprene metabolic process","termid":"GO:1900946"},{"relation_name":"is_a","term_name":"regulation of isoprene biosynthetic process","termid":"GO:1900947"},{"relation_name":"positively_regulates","term_name":"isoprene biosynthetic process","termid":"GO:0043612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of isoprene biosynthetic process","synonyms":[{"name":"activation of 2-methyl-1,3-butadiene biosynthesis","type":"narrow"},{"name":"activation of 2-methyl-1,3-butadiene biosynthetic process","type":"narrow"},{"name":"activation of hemiterpene biosynthesis","type":"narrow"},{"name":"activation of hemiterpene biosynthetic process","type":"narrow"},{"name":"activation of isoprene biosynthetic process","type":"narrow"},{"name":"positive regulation of 2-methyl-1,3-butadiene biosynthesis","type":"exact"},{"name":"positive regulation of 2-methyl-1,3-butadiene biosynthetic process","type":"exact"},{"name":"positive regulation of hemiterpene biosynthesis","type":"exact"},{"name":"positive regulation of hemiterpene biosynthetic process","type":"exact"},{"name":"up regulation of 2-methyl-1,3-butadiene biosynthesis","type":"exact"},{"name":"up regulation of 2-methyl-1,3-butadiene biosynthetic process","type":"exact"},{"name":"up regulation of hemiterpene biosynthesis","type":"exact"},{"name":"up regulation of hemiterpene biosynthetic process","type":"exact"},{"name":"up regulation of isoprene biosynthetic process","type":"exact"},{"name":"up-regulation of 2-methyl-1,3-butadiene biosynthesis","type":"exact"},{"name":"up-regulation of 2-methyl-1,3-butadiene biosynthetic process","type":"exact"},{"name":"up-regulation of hemiterpene biosynthesis","type":"exact"},{"name":"up-regulation of hemiterpene biosynthetic process","type":"exact"},{"name":"up-regulation of isoprene biosynthetic process","type":"exact"},{"name":"upregulation of 2-methyl-1,3-butadiene biosynthesis","type":"exact"},{"name":"upregulation of 2-methyl-1,3-butadiene biosynthetic process","type":"exact"},{"name":"upregulation of hemiterpene biosynthesis","type":"exact"},{"name":"upregulation of hemiterpene biosynthetic process","type":"exact"},{"name":"upregulation of isoprene biosynthetic process","type":"exact"}],"termid":"GO:1900949"}


id: FYPO:0007954
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which the rate or speed of microtubule depolymerization, i.e. the removal of tubulin dimers from a microtubule, is abnormal.","definition_xrefs":["PomBase:mlr","PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule depolymerization during vegetative growth","termid":"FYPO:0000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal rate of microtubule depolymerization during vegetative growth","termid":"FYPO:0007954"}


id: MONDO:0004824
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A fungal infection by any of the Candida species in a newborn infant up to 28 days old.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"candidiasis","termid":"MONDO:0002026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal candidiasis","secondary_identifiers":["MEDGEN:547484","SCTID:414821002","NCIT:C116810","UMLS:C0276682","DOID:9577","ICD10CM:P37.5","ICD9:771.7"],"synonyms":[{"name":"neonatal Candida infection","type":"exact"},{"name":"neonatal Monilia infection","type":"exact"},{"name":"neonatal candida infection","type":"exact"},{"name":"neonatal moniliasis","type":"exact"}],"termid":"MONDO:0004824","xrefs":{"Monarch":{"xref_id":"0004824"}}}


id: PBO:0075281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin family member 21","termid":"PBO:0075281"}


id: PBO:0057755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1914","termid":"PBO:0057755"}


id: GO:0035181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Digging into the substrate by non-feeding larvae in search for food-free sites suitable for pupation.","definition_xrefs":["PMID:12848939","PMID:12848927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larval locomotory behavior","termid":"GO:0008345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval burrowing behavior","synonyms":[{"name":"larval burrowing behaviour","type":"exact"}],"termid":"GO:0035181"}


id: GO:0007105
data:
  {"annotated_genes":["SJAG_00256","SJAG_00845","SJAG_02380","SJAG_01889","SJAG_02838","SJAG_01787","SJAG_02392","SJAG_01215","SJAG_03596","SJAG_03309","SJAG_00807"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87749,95809,110254,108341,118760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902408"},{"annotations":[110256,95342,118761,103204,90250],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903617"},{"annotations":[110867,87326,100885],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902472"}]},"cv_name":"biological_process","definition":"The process in which a contractile ring is positioned in a specific location. This process is critical for both for both symmetric and asymmetric cell divisions.","definition_xrefs":["PMID:26553932","PMID:28162898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinetic process","termid":"GO:0032506"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00256":null,"SJAG_00807":null,"SJAG_00845":null,"SJAG_01215":null,"SJAG_01787":null,"SJAG_01889":null,"SJAG_02380":null,"SJAG_02392":null,"SJAG_02838":null,"SJAG_03309":null,"SJAG_03596":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"cytokinesis, division site positioning","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null},"secondary_identifiers":["GO:0010687"],"synonyms":[{"name":"contractile ring localization","type":"related"},{"name":"cytokinesis, site selection","type":"exact"},{"name":"division plane positioning","type":"exact"},{"name":"site selection involved in cell cycle cytokinesis","type":"exact"},{"name":"site selection involved in cytokinesis","type":"exact"}],"termid":"GO:0007105","terms_by_termid":{"GO:1902408":null,"GO:1902472":null,"GO:1903617":null}}


id: GO:0006682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of galactosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of galactose by a ceramide group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosylceramide metabolic process","termid":"GO:0006681"},{"relation_name":"is_a","term_name":"galactolipid biosynthetic process","termid":"GO:0019375"},{"relation_name":"is_a","term_name":"glycosylceramide biosynthetic process","termid":"GO:0046476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"galactosylceramide biosynthetic process","synonyms":[{"name":"galactosylceramide anabolism","type":"exact"},{"name":"galactosylceramide biosynthesis","type":"exact"},{"name":"galactosylceramide formation","type":"exact"},{"name":"galactosylceramide synthesis","type":"exact"}],"termid":"GO:0006682"}


id: PBO:0080559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain binding protein 4","termid":"PBO:0080559"}


id: PBO:0057659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1251","termid":"PBO:0057659"}


id: PBO:0002092
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAs Like","termid":"PBO:0002092"}


id: PBO:0064040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 74","termid":"PBO:0064040"}


id: MONDO:0006297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenoid cystic carcinoma that arises from the maxillary sinus. It usually has an aggressive clinical course.","definition_xrefs":["NCIT:C6239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maxillary sinus carcinoma","termid":"MONDO:0001748"},{"relation_name":"is_a","term_name":"paranasal sinus adenoid cystic carcinoma","termid":"MONDO:0006352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"maxillary sinus adenoid cystic carcinoma","secondary_identifiers":["UMLS:C1334643","DOID:7198","MEDGEN:233168","EFO:1000365"],"synonyms":[{"name":"adenoid cystic carcinoma of maxillary sinus","type":"related"},{"name":"adenoid cystic carcinoma of the maxillary sinus","type":"exact"},{"name":"maxillary sinus adenoid cystic carcinoma","type":"exact"}],"termid":"MONDO:0006297","xrefs":{"Monarch":{"xref_id":"0006297"}}}


id: PBO:0058738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6862-2","termid":"PBO:0058738"}


id: GO:0035740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a CD8-positive, alpha-beta T cell population by cell division.","definition_xrefs":["GOC:BHF","CL:0000625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD8-positive, alpha-beta T cell activation","termid":"GO:0036037"},{"relation_name":"is_a","term_name":"alpha-beta T cell proliferation","termid":"GO:0046633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD8-positive, alpha-beta T cell proliferation","termid":"GO:0035740"}


id: GO:0048093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of a pattern of pigment in males.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental pigmentation","termid":"GO:0048087"},{"relation_name":"is_a","term_name":"regulation of male pigmentation","termid":"GO:0048088"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"male pigmentation","termid":"GO:0048094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of male pigmentation","synonyms":[{"name":"activation of male pigmentation","type":"narrow"},{"name":"stimulation of male pigmentation","type":"narrow"},{"name":"up regulation of male pigmentation","type":"exact"},{"name":"up-regulation of male pigmentation","type":"exact"},{"name":"upregulation of male pigmentation","type":"exact"}],"termid":"GO:0048093"}


id: MONDO:0004354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leukemia that occurs during the neonatal period.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood leukemia","termid":"MONDO:0004355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"neonatal leukemia","secondary_identifiers":["DOID:7756","NCIT:C3845","UMLS:C0235813","MEDGEN:116003"],"synonyms":[{"name":"neonatal leukemia","type":"exact"}],"termid":"MONDO:0004354","xrefs":{"Monarch":{"xref_id":"0004354"}}}


id: PBO:0060516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"napsin A aspartic peptidase","termid":"PBO:0060516"}


id: GO:0060781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of mesenchymal cells, resulting in the expansion of a cell population that contributes to the progression of the prostate gland over time.","definition_xrefs":["PMID:12221011","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell proliferation","termid":"GO:0010463"},{"relation_name":"part_of","term_name":"prostate gland development","termid":"GO:0030850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell proliferation involved in prostate gland development","termid":"GO:0060781"}


id: PBO:0060682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDRG family member 2","termid":"PBO:0060682"}


id: GO:2000052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of non-canonical Wnt-activated signaling pathway.","definition_xrefs":["GOC:yaf","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of Wnt signaling pathway","termid":"GO:0030177"},{"relation_name":"is_a","term_name":"regulation of non-canonical Wnt signaling pathway","termid":"GO:2000050"},{"relation_name":"positively_regulates","term_name":"non-canonical Wnt signaling pathway","termid":"GO:0035567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of non-canonical Wnt signaling pathway","synonyms":[{"name":"positive regulation of beta-catenin-independent Wnt receptor signaling pathway","type":"exact"},{"name":"positive regulation of non-canonical Wnt receptor signaling pathway","type":"exact"},{"name":"positive regulation of non-canonical Wnt receptor signalling pathway","type":"exact"},{"name":"positive regulation of non-canonical Wnt-activated signaling pathway","type":"exact"}],"termid":"GO:2000052"}


id: GO:0008130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of interstitial collagens in the triple helical domain. Unlike EC:3.4.24.7, this enzyme cleaves type III collagen more slowly than type I.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete neutrophil collagenase activity (obsolete GO:0008130)","synonyms":[{"name":"MMP-8","type":"exact"},{"name":"PMNL collagenase activity","type":"related"},{"name":"matrix metalloproteinase 8 activity","type":"related"},{"name":"neutrophil collagenase activity","type":"exact"}],"termid":"GO:0008130"}


id: FYPO:0003846
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which spores germinate to a lower extent than wild type following exposure to acetone.","definition_xrefs":["PMID:24727291","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"spores sensitive to acetone","termid":"FYPO:0003846"}


id: MONDO:0015484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cysticercosis is a parasitic infectious disease characterized by cyst formation in the target tissue of Taenia solium (tapeworm) parasite larvae ingested via the feces of a human with a tapeworm (human-to-human fecal-oral transmission) leading to variable clinical manifestations in muscle, the brain, spinal cord, and eyes. Infection of muscle tissue is generally asymptomatic. Cyst development in the brain and spinal cord is known as neurocysticercosis (NCC) and may cause seizures and headache. NCC can follow a serious course and may be life-threatening. Severe cases of cysticercosis are treated with albendazole and anti-inflammatory drugs.","definition_xrefs":["Orphanet:1560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taeniasis","termid":"MONDO:0000367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"cysticercosis","secondary_identifiers":["DOID:10079","EFO:0007231","MEDGEN:4122","NCIT:C34520","MedDRA:10011775","UMLS:C0010678","ICD9:123.1","icd11.foundation:1324863907","GARD:8194","ICD10CM:B69","MESH:D003551","NORD:1027","SCTID:59051007"],"synonyms":[{"name":"intestinal taenia solium infection","type":"exact"},{"name":"neurocysticercosis","type":"related"},{"name":"pork tapeworm infection","type":"exact"},{"name":"tapeworm infection: [intestinal taenia solium] or [pork]","type":"exact"},{"name":"tapeworm infection: intestinal taenia solum","type":"exact"},{"name":"tapeworm infection: pork","type":"exact"},{"name":"tenia solium infectious disease","type":"exact"}],"termid":"MONDO:0015484","xrefs":{"Monarch":{"xref_id":"0015484"}}}


id: PR:Q10328
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- phx1 gene.","definition_xrefs":["UniProtKB:Q10328","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox transcription factor phx1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC32A11.03c","synonyms":[{"name":"Spom972h-phx1","type":"exact"}],"termid":"PR:Q10328"}


id: PBO:0065636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN11 pseudogene 5","termid":"PBO:0065636"}


id: GO:0072027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the connecting tubule over time, from its formation to the mature structure. The connecting tubule is a tubular segment of the nephron; it connects the distal convoluted tubule to the collecting duct.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"connecting tubule development","synonyms":[{"name":"connecting duct development","type":"exact"}],"termid":"GO:0072027"}


id: PBO:0044302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 type A pseudogene 5","termid":"PBO:0044302"}


id: MOD:00608
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotin polyethyleneoxide amine","synonyms":[{"name":"Biotin polyethyleneoxide amine","type":"related"},{"name":"Biotin-PEO-Amine","type":"related"}],"termid":"MOD:00608"}


id: PR:Q9UUJ8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1952.10c gene.","definition_xrefs":["UniProtKB:Q9UUJ8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0658 Golgi apparatus membrane protein C1952.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.10c","synonyms":[{"name":"Spom972h-SPAC1952.10c","type":"exact"}],"termid":"PR:Q9UUJ8"}


id: PBO:0018281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med17","termid":"PBO:0018281"}


id: GO:1902242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of copal-8-ol diphosphate(3-).","definition_xrefs":["GOC:TermGenie","PMID:22672125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid catabolic process","termid":"GO:0009395"},{"relation_name":"is_a","term_name":"diterpenoid catabolic process","termid":"GO:0016103"},{"relation_name":"is_a","term_name":"copal-8-ol diphosphate(3-) metabolic process","termid":"GO:1902241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"copal-8-ol diphosphate(3-) catabolic process","synonyms":[{"name":"copal-8-ol diphosphate(3-) breakdown","type":"exact"},{"name":"copal-8-ol diphosphate(3-) catabolism","type":"exact"},{"name":"copal-8-ol diphosphate(3-) degradation","type":"exact"}],"termid":"GO:1902242"}


id: FYPO:0003745
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H3 acetylation occurs to a greater extent than normal in the central core of the centromeric regions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3 acetylation during vegetative growth","termid":"FYPO:0002363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3 acetylation at centromere central core during vegetative growth","synonyms":[{"name":"increased histone H3 acetylation at centromere central core during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003745"}


id: PBO:0076314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synemin","termid":"PBO:0076314"}


id: GO:1904698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of acinar cell proliferation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:9788538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"is_a","term_name":"regulation of acinar cell proliferation","termid":"GO:1904697"},{"relation_name":"negatively_regulates","term_name":"acinar cell proliferation","termid":"GO:1990863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of acinar cell proliferation","synonyms":[{"name":"down regulation of acinar cell proliferation","type":"exact"},{"name":"down regulation of acinic cell proliferation","type":"exact"},{"name":"down regulation of acinous cell proliferation","type":"exact"},{"name":"down-regulation of acinar cell proliferation","type":"exact"},{"name":"down-regulation of acinic cell proliferation","type":"exact"},{"name":"down-regulation of acinous cell proliferation","type":"exact"},{"name":"downregulation of acinar cell proliferation","type":"exact"},{"name":"downregulation of acinic cell proliferation","type":"exact"},{"name":"downregulation of acinous cell proliferation","type":"exact"},{"name":"inhibition of acinar cell proliferation","type":"narrow"},{"name":"inhibition of acinic cell proliferation","type":"narrow"},{"name":"inhibition of acinous cell proliferation","type":"narrow"},{"name":"negative regulation of acinic cell proliferation","type":"exact"},{"name":"negative regulation of acinous cell proliferation","type":"exact"}],"termid":"GO:1904698"}


id: PBO:0038870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aarF domain containing kinase 1","termid":"PBO:0038870"}


id: GO:0052341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of pectin in the cell wall of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by organism of cell wall pectin in other organism involved in symbiotic interaction (obsolete GO:0052341)","synonyms":[{"name":"catabolism by organism of cell wall pectin in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052341"}


id: MONDO:0016689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare variant of diffuse astrocytoma. It is characterized by the presence of a conspicuous, though variable, fraction of gemistocytic neoplastic astrocytes. Gemistocytes are round to oval astrocytes with abundant, glassy, non-fibrillary cytoplasm which appears to displace the dark, angulated nucleus to the periphery of the cell. To make the diagnosis of gemistocytic astrocytoma, gemistocytes should amount to more than approximately 20% of all tumor cells. (Adapted from WHO)","definition_xrefs":["NCIT:C4321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse astrocytoma","termid":"MONDO:0016686"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gemistocytic astrocytoma","secondary_identifiers":["ICDO:9411/3","DOID:7005","MEDGEN:87269","UMLS:C0334581","GARD:20709","Orphanet:251604"],"synonyms":[{"name":"Gemistocytoma","type":"exact"},{"name":"gemistocytic astrocytic tumor","type":"exact"},{"name":"gemistocytic astrocytic tumour","type":"exact"},{"name":"gemistocytic astrocytoma","type":"exact"},{"name":"gemistocytic astrocytoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0016689","xrefs":{"Monarch":{"xref_id":"0016689"}}}


id: MONDO:0012859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive malignant osteopetrosis in which the cause of the disease is a mutation in the TNFRS11A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"autosomal recessive osteopetrosis","termid":"MONDO:0019026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005046","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive osteopetrosis 7","secondary_identifiers":["DOID:0110946","UMLS:C2676766","MESH:C567354","GARD:10106","MEDGEN:436770","OMIM:612301","Orphanet:178389"],"synonyms":[{"name":"OPTB7","type":"exact"},{"name":"TNFRSF11A osteopetrosis (disease)","type":"exact"},{"name":"autosomal recessive osteoclast-poor osteopetrosis with hypogammaglobulinemia","type":"exact"},{"name":"autosomal recessive osteopetrosis type 7","type":"exact"},{"name":"osteoclast-poor osteopetrosis with hypogammaglobulinemia","type":"exact"},{"name":"osteopetrosis (disease) caused by mutation in TNFRSF11A","type":"exact"},{"name":"osteopetrosis autosomal recessive 7","type":"related"},{"name":"osteopetrosis osteoclast-poor with hypogammaglobulinemia","type":"related"},{"name":"osteopetrosis, autosomal recessive 7","type":"related"},{"name":"osteopetrosis, autosomal recessive type 7","type":"exact"},{"name":"osteopetrosis, osteoclast-poor, with hypogammaglobulinemia","type":"related"},{"name":"osteopetrosis-hypogammaglobulinemia syndrome","type":"exact"}],"termid":"MONDO:0012859","xrefs":{"Monarch":{"xref_id":"0012859"}}}


id: PBO:0075519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member C","termid":"PBO:0075519"}


id: PBO:0046588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 30","termid":"PBO:0046588"}


id: GO:0090700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the identity of a plant organ is maintained. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["PMID:9090883","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"part_of","term_name":"plant organ development","termid":"GO:0099402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of plant organ identity","termid":"GO:0090700"}


id: MONDO:0000818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lethal congenital contracture syndrome 4 (obsolete MONDO:0000818)","termid":"MONDO:0000818","xrefs":{"Monarch":{"xref_id":"0000818"}}}


id: GO:0016573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a histone by the addition of an acetyl group.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histone acetylation (obsolete GO:0016573)","termid":"GO:0016573"}


id: GO:1900241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phenotypic switching.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of phenotypic switching","termid":"GO:1900239"},{"relation_name":"positively_regulates","term_name":"phenotypic switching","termid":"GO:0036166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phenotypic switching","synonyms":[{"name":"activation of phenotypic dimorphism","type":"related"},{"name":"activation of phenotypic switching","type":"narrow"},{"name":"positive regulation of phenotypic dimorphism","type":"related"},{"name":"up regulation of phenotypic dimorphism","type":"related"},{"name":"up regulation of phenotypic switching","type":"exact"},{"name":"up-regulation of phenotypic dimorphism","type":"related"},{"name":"up-regulation of phenotypic switching","type":"exact"},{"name":"upregulation of phenotypic dimorphism","type":"related"},{"name":"upregulation of phenotypic switching","type":"exact"}],"termid":"GO:1900241"}


id: PBO:0066669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ripply transcriptional repressor 2","termid":"PBO:0066669"}


id: FYPO:0003413
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, forms one or more branches near a septum, is elongated, and has more than one septum.","definition_xrefs":["PMID:18256290","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched, elongated, multiseptate cell","termid":"FYPO:0000134"},{"relation_name":"is_a","term_name":"inviable elongated multiseptate vegetative cell","termid":"FYPO:0001494"},{"relation_name":"is_a","term_name":"inviable branched, elongated vegetative cell","termid":"FYPO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000032","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"inviable branched, elongated, multiseptate vegetative cell","synonyms":[{"name":"inviable branched, elongated, multiseptate cell during vegetative growth","type":"exact"},{"name":"inviable branched, elongated, multiseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable branched, long, multiseptate cell","type":"exact"},{"name":"lethal; branched, elongated, multiseptate vegetative cell","type":"exact"}],"termid":"FYPO:0003413"}


id: MONDO:0005435
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Group of systemic vasculitis with a strong association with ANCA. The disorders are characterized by necrotizing inflammation of small and medium size vessels, with little or no immune-complex deposits in vessel walls.","definition_xrefs":["EFO:0004826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"anti-neutrophil antibody associated vasculitis","termid":"MONDO:0005435","xrefs":{"Monarch":{"xref_id":"0005435"}}}


id: PBO:0057530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR646 host gene","termid":"PBO:0057530"}


id: FYPO:0000168
data:
  {"alleles_by_uniquename":{"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118832,118928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the spindle assembly checkpoint of a mitotic cell cycle is abnormal. The mitotic spindle assembly checkpoint normally delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["GO:0007094","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic metaphase/anaphase transition","termid":"FYPO:0000200"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle checkpoint","termid":"FYPO:0001704"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01330":null},"genotype_count":1,"genotypes_by_uniquename":{"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000298","FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic spindle assembly checkpoint","references_by_uniquename":{"PMID:21802294":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01330"],"single_locus_genotype_uniquenames":["mad2delta"],"synonyms":[{"name":"abnormal mitotic cell cycle spindle assembly checkpoint","type":"exact"},{"name":"abnormal mitotic spindle assembly checkpoint activation","type":"related"}],"termid":"FYPO:0000168","terms_by_termid":{"FYECO:0000162":null,"FYPO:0004318":null}}


id: PBO:0050560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HTLV-1 related endogenous sequence","termid":"PBO:0050560"}


id: PBO:0041985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC28A antisense RNA 1","termid":"PBO:0041985"}


id: SO:0001518
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inversion event that includes the centromere.","direct_ancestors":[{"relation_name":"is_a","term_name":"inversion_attribute","termid":"SO:0001517"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pericentric","termid":"SO:0001518"}


id: FYPO:0004290
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding at microsatellite repeat regions by a gene product is decreased, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased double-stranded DNA binding","termid":"FYPO:0005018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000653"],"is_obsolete":false,"name":"decreased microsatellite DNA binding","synonyms":[{"name":"decreased microsatellite repeat binding","type":"exact"},{"name":"reduced microsatellite DNA binding","type":"exact"}],"termid":"FYPO:0004290"}


id: SO:0000413
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region where the sequence differs from that of a specified sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"remark","termid":"SO:0000700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_difference","synonyms":[{"name":"INSDC_feature:misc_difference","type":"exact"},{"name":"sequence difference","type":"exact"}],"termid":"SO:0000413"}


id: PR:O14118
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- efm3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-lysine N-methyltransferase efm3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.03","synonyms":[{"name":"Spom972h-efm3","type":"exact"},{"name":"elongation factor methyltransferase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14118"}


id: FYPO:0006868
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell cortex is decreased during prophase of the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex","termid":"FYPO:0006867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to cell cortex during meiotic prophase I","synonyms":[{"name":"decreased protein localisation to cell cortex during meiotic prophase I","type":"exact"},{"name":"decreased protein localization to cell cortex during prophase I","type":"exact"},{"name":"decreased protein localization to cell cortex during prophase of meiosis I","type":"exact"},{"name":"decreased protein localization to cell cortex in zygote","type":"related"},{"name":"reduced protein localization to cell cortex during meiotic prophase I","type":"exact"}],"termid":"FYPO:0006868"}


id: FYPO:0005857
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of antisense RNA measured in a cell differs from normal when the cell is in the vegetative growth phase of the life cycle. Total antisense RNA or a specific antisense RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered mature ncRNA level during vegetative growth","termid":"FYPO:0006465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"altered antisense RNA level during vegetative growth","synonyms":[{"name":"abnormal antisense RNA level during vegetative growth","type":"exact"},{"name":"altered antisense RNA level during mitotic cell cycle","type":"related"},{"name":"altered antisense RNA transcript level during vegetative growth","type":"exact"},{"name":"altered cellular antisense RNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0005857"}


id: PBO:0036485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine specific carbamoyl-phosphate synthase subunit Arg5","termid":"PBO:0036485"}


id: PBO:0113371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with structural similarity to lipid transport protein Vps13p; localizes to multiple membrane contact sites between organelles including mitochondria–ER contact sites; non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0113371"}


id: PBO:0077431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM167A pseudogene 2","termid":"PBO:0077431"}


id: GO:0098033
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A fiber attached to the neck at the base of some icosahedral viral capsids.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral capsid, fiber","termid":"GO:0098022"},{"relation_name":"part_of","term_name":"icosahedral viral capsid, neck","termid":"GO:0098030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"icosahedral viral capsid, neck fiber","termid":"GO:0098033"}


id: PR:Q09864
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mcp60 gene.","definition_xrefs":["UniProtKB:Q09864","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 60, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.04","synonyms":[{"name":"HSP60 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mcp60","type":"exact"}],"termid":"PR:Q09864"}


id: GO:0031033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a filament composed of myosin molecules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin cytoskeleton organization","termid":"GO:0030036"},{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"myosin filament organization","synonyms":[{"name":"myosin filament assembly or disassembly","type":"related"},{"name":"myosin filament organisation","type":"exact"},{"name":"myosin polymerization or depolymerization","type":"related"}],"termid":"GO:0031033"}


id: PBO:0034550
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_6-azauracil","termid":"PBO:0034550"}


id: PBO:0075818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"slingshot protein phosphatase 2","termid":"PBO:0075818"}


id: SO:0000867
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A frameshift caused by deleting two bases.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift","termid":"SO:0000865"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus_2_frameshift","synonyms":[{"name":"minus 2 frameshift","type":"exact"}],"termid":"SO:0000867"}


id: GO:0019187
data:
  {"annotated_genes":["SJAG_02102"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004578"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a mannose residue to an oligosaccharide, forming a beta-(1->4) linkage.","definition_xrefs":["GOC:mcc","PMID:8166646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase activity","termid":"GO:0000030"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02102":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"beta-1,4-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019187","terms_by_termid":{"GO:0004578":null}}


id: MONDO:0020758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0020758 (obsolete MONDO:0020758)","termid":"MONDO:0020758","xrefs":{"Monarch":{"xref_id":"0020758"}}}


id: PBO:0076902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 56, pseudogene","termid":"PBO:0076902"}


id: GO:1900800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cspyrone B1.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"cspyrone B1 metabolic process","synonyms":[{"name":"cspyrone B1 metabolism","type":"exact"}],"termid":"GO:1900800"}


id: MONDO:0018218
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"autosomal recessive cerebral atrophy","secondary_identifiers":["GARD:21560","Orphanet:363969","UMLS:C4755252","MEDGEN:1653890"],"termid":"MONDO:0018218","xrefs":{"Monarch":{"xref_id":"0018218"}}}


id: GO:0043240
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of the Fanconi anaemia (FA) proteins including A, C, E, G and F (FANCA-F). Functions in the activation of the downstream protein FANCD2 by monoubiquitylation, and is essential for protection against chromosome breakage.","definition_xrefs":["GOC:jl","PMID:12093742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"Fanconi anaemia nuclear complex","synonyms":[{"name":"FA complex","type":"exact"},{"name":"FA core complex","type":"exact"},{"name":"FA nuclear complex","type":"exact"},{"name":"Fanconi anaemia complex","type":"exact"}],"termid":"GO:0043240"}


id: MONDO:0044675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRP5-related primary osteoporosis","secondary_identifiers":["UMLS:C5567241","GARD:22031","Orphanet:498481","MEDGEN:1798664"],"termid":"MONDO:0044675","xrefs":{"Monarch":{"xref_id":"0044675"}}}


id: PBO:0027566
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_mitotic_spindle_microtubules_protruding_beyond_spindle_pole_body","termid":"PBO:0027566"}


id: PR:O13875
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B3.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized Sel1-like repeat-containing protein C1B3.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.10c","synonyms":[{"name":"Spom972h-SPAC1B3.10c","type":"exact"}],"termid":"PR:O13875"}


id: GO:0047232
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: D-galactosyl-1,4-N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-beta-D-glucosylceramide + UDP-N-acetyl-D-glucosamine = N-acetyl-D-glucosaminyl-1,6-beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-beta-D-glucosyceramide + UDP.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete galactosyl-N-acetylglucosaminylgalactosylglucosyl-ceramide beta-1,6-N-acetylglucosaminyltransferase activity (obsolete GO:0047232)","synonyms":[{"name":"UDP-N-acetyl-D-glucosamine:D-galactosyl-1,4-N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-beta-D-glucosylceramide beta-1,6-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-acetyllactosaminide beta1->6-acetylglucosaminyltransferase","type":"broad"}],"termid":"GO:0047232"}


id: MONDO:0008678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic multisystemic neurodevelopmental disorder characterized by a distinct facial appearance, cardiac anomalies (most frequently supravalvular aortic stenosis), cognitive and developmental abnormalities, and connective tissue abnormalities (such as joint laxity)","definition_xrefs":["Orphanet:904"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"excluded_subClassOf","term_name":"heart disorder","termid":"MONDO:0005267"},{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"obsolete motor stereotypies (obsolete MONDO:0017656)","termid":"MONDO:0017656"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic epicanthus (obsolete MONDO:0020165)","termid":"MONDO:0020165"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 7","termid":"MONDO:0016906"},{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Williams syndrome","secondary_identifiers":["NANDO:2200286","DOID:1928","MESH:D018980","MedDRA:10049644","NORD:1854","NANDO:1200664","SCTID:63247009","UMLS:C0175702","NCIT:C85232","DECIPHER:3","GARD:7891","ICD9:759.89","MEDGEN:59799","OMIM:194050"],"synonyms":[{"name":"Fanconi Schlesinger syndrome","type":"exact"},{"name":"WBS","type":"related"},{"name":"WMS","type":"related"},{"name":"Williams syndrome","type":"exact"},{"name":"Williams-Beuren syndrome","type":"exact"},{"name":"Williams-Beuren syndrome (WBS)","type":"exact"},{"name":"chromosome 7Q11.23 deletion syndrome, 1.5- to 1.8-Mb","type":"related"},{"name":"deletion 7q11.23","type":"exact"},{"name":"monosomy 7q11.23","type":"exact"}],"termid":"MONDO:0008678","xrefs":{"Monarch":{"xref_id":"0008678"}}}


id: MOD:00516
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["RESID:AA0151#var","Unimod:148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"Hex1HexNAc2 N4-glycosylated asparagine","synonyms":[{"name":"Hex(1)HexNAc(2)","type":"related"},{"name":"Hex1HexNAc2","type":"related"}],"termid":"MOD:00516"}


id: FYPO:0005903
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring contraction begins, but stops before the ring completely constricts and is disassembled.","definition_xrefs":["PomBase:mah","PMID:19570908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000032"],"is_obsolete":false,"name":"incomplete actomyosin contractile ring contraction","synonyms":[{"name":"incomplete actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"incomplete actomyosin contractile ring contraction during vegetative growth","type":"exact"}],"termid":"FYPO:0005903"}


id: GO:0007291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The resolution of the male germline syncytium or cyst into individual gametes by packaging each spermatid into its own plasma membrane.","definition_xrefs":["GOC:bf","PMID:9550716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellularization","termid":"GO:0007349"},{"relation_name":"part_of","term_name":"spermatid development","termid":"GO:0007286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sperm individualization","termid":"GO:0007291"}


id: PBO:0051811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol 1,4,5-triphosphate receptor associated 1","termid":"PBO:0051811"}


id: FYPO:0003808
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the movement of mitochondria is normal (i.e. indistinguishable from wild type). Mitochondria normally form tips that grow and shrink stochastically.","definition_xrefs":["PomBase:mah","PMID:19373772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitochondrion","termid":"FYPO:0006034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal mitochondrial motility","synonyms":[{"name":"normal mitochondrial dynamics","type":"exact"},{"name":"normal mitochondrial mobility","type":"exact"},{"name":"normal mitochondrial motility during mitotic cell cycle","type":"exact"},{"name":"normal mitochondrial motility during vegetative growth","type":"exact"},{"name":"normal nuclear membrane morphology","type":"narrow"}],"termid":"FYPO:0003808"}


id: FYPO:0003660
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break repair occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break repair during vegetative growth","termid":"FYPO:0000777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000293","FYPO:0000298","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased double-strand break repair during vegetative growth","synonyms":[{"name":"decreased double-strand break repair during mitotic cell cycle","type":"related"},{"name":"reduced double-strand break repair during vegetative growth","type":"exact"}],"termid":"FYPO:0003660"}


id: MONDO:0021118
data:
  {"annotated_genes":["SJAG_03453","SJAG_02748","SJAG_00980","SJAG_04394","SJAG_02231","SJAG_04699","SJAG_01620","SJAG_04206","SJAG_00260","SJAG_02426","SJAG_02187","SJAG_03920","SJAG_02226","SJAG_01837","SJAG_01082"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85969,85973,85971,85967,85972,85968,86818,85966,85970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0005575"},{"annotations":[86294,86295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011719"},{"annotations":[85858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007356"},{"annotations":[84679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012249"},{"annotations":[85129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013699"},{"annotations":[85131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013710"},{"annotations":[85141,85142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008018"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm involving the small or large intestine.","definition_xrefs":["NCIT:C3141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"is_a","term_name":"digestive system neoplasm","termid":"MONDO:0021223"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_00980":null,"SJAG_01082":null,"SJAG_01620":null,"SJAG_01837":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02231":null,"SJAG_02426":null,"SJAG_02748":null,"SJAG_03453":null,"SJAG_03920":null,"SJAG_04206":null,"SJAG_04394":null,"SJAG_04699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:43932","ONCOTREE:BOWEL","SCTID:126769007","DOID:4610","UMLS:C0021841"],"synonyms":[{"name":"bowel neoplasm","type":"related"},{"name":"intestinal benign neoplasm","type":"related"},{"name":"intestinal neoplasm","type":"exact"},{"name":"intestinal neoplasms","type":"exact"},{"name":"intestinal tumor","type":"exact"},{"name":"intestinal tumors","type":"exact"},{"name":"intestinal tumour","type":"exact"},{"name":"intestinal tumours","type":"exact"},{"name":"intestine growth","type":"exact"},{"name":"intestine neoplasm","type":"exact"},{"name":"intestine neoplasm (disease)","type":"exact"},{"name":"intestine tumor","type":"exact"},{"name":"intestine tumour","type":"exact"},{"name":"neoplasm of intestinal tract","type":"exact"},{"name":"neoplasm of intestine","type":"exact"},{"name":"neoplasm of intestines","type":"exact"},{"name":"neoplasm of the intestines","type":"exact"},{"name":"tumor of intestine","type":"exact"},{"name":"tumor of intestines","type":"exact"},{"name":"tumor of the intestines","type":"exact"},{"name":"tumour of intestine","type":"exact"},{"name":"tumour of intestines","type":"exact"},{"name":"tumour of the intestines","type":"exact"}],"termid":"MONDO:0021118","terms_by_termid":{"MONDO:0005575":null,"MONDO:0007356":null,"MONDO:0008018":null,"MONDO:0011719":null,"MONDO:0012249":null,"MONDO:0013699":null,"MONDO:0013710":null},"xrefs":{"Monarch":{"xref_id":"0021118"}}}


