# terms

id: GO:0019722
data:
  {"annotated_genes":["SJAG_04871","SJAG_03486","SJAG_03799","SJAG_02858","SJAG_04471","SJAG_03793","SJAG_03879","SJAG_01181","SJAG_03501","SJAG_04551","SJAG_03631","SJAG_02429","SJAG_00296","SJAG_03802","SJAG_04668"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88203,90700,91884,97152,97602,116880],"is_not":false,"summary":null,"term":"GO:0019722"},{"annotations":[91882,97601,118069,112850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097720"},{"annotations":[117724,115977,115639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061762"},{"annotations":[115626,100493],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0106057"},{"annotations":[110468,101648],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0050850"}]},"cv_name":"biological_process","definition":"Any intracellular signal transduction in which the signal is passed on within the cell via calcium ions.","definition_xrefs":["GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signaling cassette","termid":"GO:0141124"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_01181":null,"SJAG_02429":null,"SJAG_02858":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03631":null,"SJAG_03793":null,"SJAG_03799":null,"SJAG_03802":null,"SJAG_03879":null,"SJAG_04471":null,"SJAG_04551":null,"SJAG_04668":null,"SJAG_04871":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"calcium-mediated signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Calcium_signaling"],"synonyms":[{"name":"calcium ion signaling","type":"exact"},{"name":"calcium signaling","type":"exact"},{"name":"calcium signalling","type":"exact"},{"name":"calcium-mediated signalling","type":"exact"}],"termid":"GO:0019722","terms_by_termid":{"GO:0019722":null,"GO:0050850":null,"GO:0061762":null,"GO:0097720":null,"GO:0106057":null}}


id: PBO:0087115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosome-associated protein; required for global translational elongation after recovery from stationary phase due to starvation; crosslinks to the 25S rRNA near the A site that overlaps the GTPase activation center, and to tRNAs; possible role in the iron deprivation response; localizes to the nucleus and cytoplasm, with enhanced nuclear localization under iron-replete conditions; null mutant exhibits slow growth during iron deprivation; orthologous to human CCDC124","termid":"PBO:0087115"}


id: PBO:0089689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar dipeptidyl peptidase","termid":"PBO:0089689"}


id: GO:1901551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endothelial cell development.","definition_xrefs":["PMID:19470579","GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of endothelial cell differentiation","termid":"GO:0045602"},{"relation_name":"is_a","term_name":"regulation of endothelial cell development","termid":"GO:1901550"},{"relation_name":"negatively_regulates","term_name":"endothelial cell development","termid":"GO:0001885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endothelial cell development","synonyms":[{"name":"down regulation of endothelial cell development","type":"exact"},{"name":"down-regulation of endothelial cell development","type":"exact"},{"name":"downregulation of endothelial cell development","type":"exact"},{"name":"inhibition of endothelial cell development","type":"narrow"}],"termid":"GO:1901551"}


id: PBO:0071012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 14","termid":"PBO:0071012"}


id: PBO:0045271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 18","termid":"PBO:0045271"}


id: PBO:0090379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine cleavage complex subunit P","termid":"PBO:0090379"}


id: GO:0015857
data:
  {"annotated_genes":["SJAG_03970","SJAG_04714"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87566],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905530"},{"annotations":[95023,87921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098721"}]},"cv_name":"biological_process","definition":"The directed movement of uracil, 2,4-dioxopyrimidine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase transport","termid":"GO:0015855"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03970":null,"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"uracil transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015857","terms_by_termid":{"GO:0098721":null,"GO:1905530":null}}


id: PATO:0002447
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer being divided into four parts.","definition_xrefs":["PATOC:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quadripartite","termid":"PATO:0002447"}


id: GO:0035876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the association between sister chromatids of a replicated chromosome along the length of the chromosome arms, is maintained as chromosomes condense, attach to the spindle in a bipolar orientation, and congress to the metaphase plate during a meiotic cell cycle.","definition_xrefs":["PMID:1708436","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete maintenance of meiotic sister chromatid cohesion, arms (obsolete GO:0035876)","synonyms":[{"name":"maintenance of meiotic sister chromatin cohesion along arms","type":"exact"},{"name":"maintenance of sister chromatin cohesion along arms at meiosis I","type":"exact"}],"termid":"GO:0035876"}


id: PBO:0031709
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mitophagy","termid":"PBO:0031709"}


id: PBO:0052858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 5-1","termid":"PBO:0052858"}


id: MONDO:0002993
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroendocrine tumor arising from the delta cells of the pancreas. It is characterized by inappropriate secretion of somatostatin and associated with diabetes mellitus, hypochlorhydria, gallbladder disease, diarrhea, steatorrhea, anemia, and weight loss.","definition_xrefs":["NCIT:C95595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic delta cell neuroendocrine tumor","termid":"MONDO:0002994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pancreatic somatostatinoma","secondary_identifiers":["MEDGEN:235079","UMLS:C1368041","DOID:4432"],"synonyms":[{"name":"pancreatic delta cell somatostatin producing neoplasm","type":"exact"},{"name":"pancreatic somatostatin cell tumor","type":"exact"},{"name":"pancreatic somatostatin cell tumour","type":"exact"}],"termid":"MONDO:0002993","xrefs":{"Monarch":{"xref_id":"0002993"}}}


id: PBO:0071230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 71","termid":"PBO:0071230"}


id: PBO:0073774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 4 member 8","termid":"PBO:0073774"}


id: PBO:0055178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2602","termid":"PBO:0055178"}


id: GO:0043954
data:
  {"annotated_genes":["SJAG_03812","SJAG_04841"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071788"},{"annotations":[96777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062195"}]},"cv_name":"biological_process","definition":"The organization process that preserves a cellular component in a stable functional or structural state.","definition_xrefs":["GOC:dph","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03812":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular component maintenance","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0071956"],"synonyms":[{"name":"cellular component maintenance at cellular level","type":"exact"}],"termid":"GO:0043954","terms_by_termid":{"GO:0062195":null,"GO:0071788":null}}


id: PBO:0036030
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete_septum","termid":"PBO:0036030"}


id: PBO:0042055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 116","termid":"PBO:0042055"}


id: PBO:0075487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily D member 5, pseudogene","termid":"PBO:0075487"}


id: PBO:0044208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin L pseudogene 8","termid":"PBO:0044208"}


id: GO:0034455
data:
  {"annotated_genes":["SJAG_01764","SJAG_02702","SJAG_00879","SJAG_05187","SJAG_02608","SJAG_03341"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88713,91528,92117,105469,106454,110058],"is_not":false,"summary":null,"term":"GO:0034455"}]},"cv_name":"cellular_component","definition":"A protein complex that forms a subcomplex of the 90S preribosome and is required for the subsequent assembly of the rest of the preribosome. In S. cerevisiae, it is composed of Utp5p, Utp4p, Nan1p, Utp8p, Utp9p, Utp10 and Utp15p.","definition_xrefs":["PMID:17515605","GOC:vw","GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00879":null,"SJAG_01764":null,"SJAG_02608":null,"SJAG_02702":null,"SJAG_03341":null,"SJAG_05187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005730"}],"interesting_parent_ids":["GO:0005730","GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"t-UTP complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Nan1p-containing subcomplex of 90S preribosome","type":"exact"}],"termid":"GO:0034455","terms_by_termid":{"GO:0034455":null}}


id: MONDO:0013591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any multiple epiphyseal dysplasia in which the cause of the disease is a mutation in the COL9A1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple epiphyseal dysplasia due to collagen 9 anomaly","termid":"MONDO:0015627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"epiphyseal dysplasia, multiple, 6","secondary_identifiers":["DOID:0070301","GARD:13376","MEDGEN:436517","OMIM:614135","UMLS:C2675767"],"synonyms":[{"name":"COL9A1 multiple epiphyseal dysplasia (disease)","type":"exact"},{"name":"EDM6","type":"related"},{"name":"epiphyseal dysplasia, multiple, 6","type":"exact"},{"name":"epiphyseal dysplasia, multiple, type 6","type":"exact"},{"name":"multiple epiphyseal dysplasia (disease) caused by mutation in COL9A1","type":"exact"},{"name":"multiple epiphyseal dysplasia 6","type":"related"}],"termid":"MONDO:0013591","xrefs":{"Monarch":{"xref_id":"0013591"}}}


id: GO:0140357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of heme from inside the vacuole across the vacuolar membrane and into the cytosol.","definition_xrefs":["PMID:28193844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"heme transmembrane transport","termid":"GO:0035351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"heme export from vacuole to cytoplasm","termid":"GO:0140357"}


id: GO:0098511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to detect low environmental humidity, convert this detection into a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["PMID:18269908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of humidity","termid":"GO:0098509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of low humidity","termid":"GO:0098511"}


id: GO:0001965
data:
  {"annotated_genes":["SJAG_02027"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71933],"is_not":false,"summary":null,"term":"GO:0001965"}]},"cv_name":"molecular_function","definition":"Binding to a G-protein alpha subunit. The alpha subunit binds a guanine nucleotide.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02027":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"G-protein alpha-subunit binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"G-alpha protein subunit binding","type":"exact"}],"termid":"GO:0001965","terms_by_termid":{"GO:0001965":null}}


id: MONDO:0004926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the lacrimal sac.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"acute inflammation of lacrimal passage","termid":"MONDO:0004055"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"},{"relation_name":"is_a","term_name":"nasolacrimal duct disorder","termid":"MONDO:0044984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"dacryocystitis","secondary_identifiers":["MESH:D003607","MEDGEN:3686","ICD9:375.30","DOID:9938","icd11.foundation:1034960983","NCIT:C34521","SCTID:85777005","UMLS:C0010930"],"synonyms":[{"name":"Dacryoadenitides","type":"exact"},{"name":"Dacryocystitides","type":"exact"},{"name":"dacryoadenitis","type":"related"},{"name":"inflammation of lacrimal sac","type":"exact"},{"name":"lacrimal sac inflammation","type":"exact"}],"termid":"MONDO:0004926","xrefs":{"Monarch":{"xref_id":"0004926"}}}


id: GO:0051715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The killing by an organism of a cell in another organism by means of the rupture of cell membranes and the loss of cytoplasm.","definition_xrefs":["GOC:ai","PMID:22484288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytolysis","termid":"GO:0019835"},{"relation_name":"is_a","term_name":"killing of cells of another organism","termid":"GO:0031640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytolysis in another organism","secondary_identifiers":["GO:0001901","GO:0044649"],"synonyms":[{"name":"cytolysis in other organism","type":"exact"},{"name":"cytolysis of cells of another organism","type":"exact"},{"name":"envenomation resulting in cytolysis in another organism","type":"narrow"},{"name":"envenomation resulting in cytolysis in other organism","type":"narrow"}],"termid":"GO:0051715"}


id: PBO:0074340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3","termid":"PBO:0074340"}


id: PBO:0044407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily E member 1","termid":"PBO:0044407"}


id: GO:1990243
data:
  {"annotated_genes":["SJAG_02311","SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92226,107453],"is_not":false,"summary":null,"term":"GO:1990243"}]},"cv_name":"cellular_component","definition":"A heterodimeric transcription factor complex composed of the bZIP proteins atf1 and pcr1. The heterodimer binds m26 sites (homologous to CRE).","definition_xrefs":["PMID:24224056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor AP-1 complex","termid":"GO:0035976"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"atf1-pcr1 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990243","terms_by_termid":{"GO:1990243":null}}


id: MONDO:0017159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome with pulmonary hypertension as a major feature (obsolete MONDO:0017159)","secondary_identifiers":["Orphanet:275853"],"termid":"MONDO:0017159","xrefs":{"Monarch":{"xref_id":"0017159"}}}


id: PBO:0054968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2382","termid":"PBO:0054968"}


id: GO:0048872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any biological process involved in the maintenance of the steady-state number of cells within a population of cells.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal-level homeostasis","termid":"GO:0048871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"homeostasis of number of cells","synonyms":[{"name":"cell population homeostasis","type":"exact"},{"name":"homeostasis of cell number","type":"exact"}],"termid":"GO:0048872"}


id: GO:0050865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell activation, the change in the morphology or behavior of a cell resulting from exposure to an activating factor such as a cellular or soluble ligand.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"cell activation","termid":"GO:0001775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell activation","termid":"GO:0050865"}


id: FYPO:0001939
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ubiquinol-cytochrome-c reductase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"},{"relation_name":"is_a","term_name":"abnormal transmembrane transporter activity","termid":"FYPO:0002116"},{"relation_name":"is_a","term_name":"abnormal proton transport","termid":"FYPO:0005971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002114","FYPO:0000002","FYPO:0000661","FYPO:0001985","FYPO:0000652","FYPO:0000654","FYPO:0000138","FYPO:0000707","FYPO:0005447"],"is_obsolete":false,"name":"abnormal ubiquinol-cytochrome-c reductase activity","termid":"FYPO:0001939"}


id: GO:0046554
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-malate + NADP+ = oxaloacetate + NADPH + H+.","definition_xrefs":["RHEA:10824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate dehydrogenase activity","termid":"GO:0016615"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"L-malate dehydrogenase (NADP+) activity","secondary_identifiers":["KEGG_REACTION:R00343","EC:1.1.1.82","MetaCyc:MALATE-DEHYDROGENASE-NADP+-RXN"],"synonyms":[{"name":"(S)-malate:NADP+ oxidoreductase activity","type":"related"},{"name":"NADP malate dehydrogenase activity","type":"related"},{"name":"NADP-linked malate dehydrogenase activity","type":"related"},{"name":"NADP-malate dehydrogenase activity","type":"related"},{"name":"malate NADP dehydrogenase activity","type":"related"},{"name":"malic dehydrogenase (nicotinamide adenine dinucleotide phosphate)","type":"related"}],"termid":"GO:0046554"}


id: PBO:0034173
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_transport_to_from_or_in","termid":"PBO:0034173"}


id: PBO:0003187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase Rhp16b (predicted)","termid":"PBO:0003187"}


id: PR:Q9Y7V1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC645.12c gene.","definition_xrefs":["UniProtKB:Q9Y7V1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C645.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC645.12c","synonyms":[{"name":"Spom972h-SPCC645.12c","type":"exact"}],"termid":"PR:Q9Y7V1"}


id: FYPO:0006332
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which the observed mating efficiency, as determined by counting zygotes, asci, and sometimes spores, is normal (i.e. the same as in wild-type cells) when the population in which the mating cells are found is in stationary phase.","definition_xrefs":["PMID:25204792","PomBase:mah","PMID:28160081","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mating efficiency","termid":"FYPO:0001147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal mating efficiency during stationary phase","termid":"FYPO:0006332"}


id: SO:0001016
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A purine-rich sequence in the group I introns which determines the locations of the splice sites in group I intron splicing and has catalytic activity.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron_domain","termid":"SO:0001014"},{"relation_name":"part_of","term_name":"group_I_intron","termid":"SO:0000587"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal_guide_sequence","synonyms":[{"name":"IGS","type":"exact"},{"name":"internal guide sequence","type":"exact"}],"termid":"SO:0001016"}


id: PBO:0088170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain containing protein of unknown function; binds to Mca1p, a caspase-related protease that regulates H2O2-induced apoptosis; overexpression causes G1 phase growth arrest and clonal death that is suppressed by overexpression of MCA1","termid":"PBO:0088170"}


id: PBO:0042239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine receptor 2","termid":"PBO:0042239"}


id: GO:0051017
data:
  {"annotated_genes":["SJAG_03011","SJAG_03088","SJAG_04522","SJAG_00677","SJAG_00970","SJAG_04703","SJAG_00938","SJAG_04621"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88803,93305,101215,104638,118135],"is_not":false,"summary":null,"term":"GO:0051017"},{"annotations":[107623,115677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070649"},{"annotations":[107103],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032231"}]},"cv_name":"biological_process","definition":"The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"actin filament bundle organization","termid":"GO:0061572"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00677":null,"SJAG_00938":null,"SJAG_00970":null,"SJAG_03011":null,"SJAG_03088":null,"SJAG_04522":null,"SJAG_04621":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036","GO:0044085"],"is_obsolete":false,"name":"actin filament bundle assembly","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0045011"],"synonyms":[{"name":"actin bundling activity","type":"related"},{"name":"actin cable assembly","type":"related"},{"name":"actin cable formation","type":"related"}],"termid":"GO:0051017","terms_by_termid":{"GO:0032231":null,"GO:0051017":null,"GO:0070649":null}}


id: GO:0052118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on, within or near its host organism towards a higher level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive energy taxis in host environment (obsolete GO:0052118)","synonyms":[{"name":"positive energy taxis in response to host environment","type":"exact"}],"termid":"GO:0052118"}


id: PBO:0052583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine rich nucleolar protein 1 pseudogene 1","termid":"PBO:0052583"}


id: PBO:0074122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC30A6 divergent transcript","termid":"PBO:0074122"}


id: SO:0001667
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sub element of the DCE core promoter element with consensus sequence AGC.","definition_xrefs":["SO:ke","PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"part_of","term_name":"DCE","termid":"SO:0001664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DCE_SIII","synonyms":[{"name":"DCE SIII","type":"exact"}],"termid":"SO:0001667"}


id: PATO:0000384
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an individual or a population whose sex organs contain only male gametes.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenotypic sex","termid":"PATO:0001894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male","termid":"PATO:0000384"}


id: PBO:0077541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 253","termid":"PBO:0077541"}


id: GO:0071114
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaV-beta3 integrin complex bound to tumstatin, the NC1 domain of the alpha3 chain of type IV collagen.","definition_xrefs":["PMID:12682293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alphaV-beta3 integrin-tumstatin complex","synonyms":[{"name":"ITGAV-ITGB3-COL4A3 complex","type":"narrow"}],"termid":"GO:0071114"}


id: PBO:0028217
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septation_following_abnormal_chromosome_segregation,_with_binucleate_and_anucleate_compartment_formation_during_cellular_response_to_salt_stress","termid":"PBO:0028217"}


id: FYPO:0006160
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad51 accumulates is lower than normal during prophase of the first meiotic nuclear division.","definition_xrefs":["PMID:16532353","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased number of Rad51 foci during meiotic prophase I","synonyms":[{"name":"decreased number of Rad51 foci during prophase I","type":"exact"},{"name":"reduced number of Rad51 foci during prophase I","type":"exact"}],"termid":"FYPO:0006160"}


id: MONDO:0016155
data:
  {"annotated_genes":["SJAG_04053","SJAG_03188","SJAG_01491","SJAG_04316"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012248"},{"annotations":[86154,86153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013162"},{"annotations":[85435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014142"},{"annotations":[85342,85341,85340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009364"},{"annotations":[85428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014140"},{"annotations":[86147,86148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013154"},{"annotations":[86152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013159"},{"annotations":[85433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014141"},{"annotations":[86150,86151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013160"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"disorder of protein O-glycosylation","termid":"MONDO:0017741"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of alpha-dystroglycan","termid":"MONDO:0018282"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01491":null,"SJAG_03188":null,"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"qualitative or quantitative defects of protein involved in O-glycosylation of alpha-dystroglycan","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:207113","UMLS:C5679795","GARD:20402","MEDGEN:1842564"],"synonyms":[{"name":"secondary alpha-dystroglycanopathy","type":"exact"},{"name":"secondary dystroglycanopathy","type":"exact"}],"termid":"MONDO:0016155","terms_by_termid":{"MONDO:0009364":null,"MONDO:0012248":null,"MONDO:0013154":null,"MONDO:0013159":null,"MONDO:0013160":null,"MONDO:0013162":null,"MONDO:0014140":null,"MONDO:0014141":null,"MONDO:0014142":null},"xrefs":{"Monarch":{"xref_id":"0016155"}}}


id: PBO:0036395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human MAPK organizer 1 (MORG1) family Wdr83 (predicted)","termid":"PBO:0036395"}


id: PBO:0030744
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_phosphatidylinositol-3-phosphate_level","termid":"PBO:0030744"}


id: PBO:0081375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF213 antisense RNA 1 (head to head)","termid":"PBO:0081375"}


id: PBO:0066725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 22","termid":"PBO:0066725"}


id: MONDO:1010911
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Muscular dystrophy that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, non-human animal","termid":"MONDO:0024965"},{"relation_name":"is_a","term_name":"myopathy, dog","termid":"MONDO:1010917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy, dog","secondary_identifiers":["OMIA:000679-9615"],"termid":"MONDO:1010911","xrefs":{"Monarch":{"xref_id":"1010911"}}}


id: PBO:0053625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 668","termid":"PBO:0053625"}


id: GO:0032440
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: n-alkanal + NAD(P)+ = alk-2-enal + NAD(P)H + H+.","definition_xrefs":["EC:1.3.1.74","PMID:16299173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"2-alkenal reductase [NAD(P)+] activity","synonyms":[{"name":"NAD(P)H-dependent alkenal/one oxidoreductase activity","type":"related"},{"name":"n-alkanal:NAD(P)+ 2-oxidoreductase activity","type":"related"}],"termid":"GO:0032440"}


id: PR:000024855
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteolytic cleavage product that is derived from P-factor precursor. In Schizosaccharomyces pombe 972h- the sequence is TYADFLRAYQSWNTFVNPDRPNL, corresponding to amino acids 66-88 or 134-156 of UniProtKB:Q09180-1.","definition_xrefs":["PRO:MSY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"map2/Clv:P-factor","pombase_gene_id":"SPCC1795.06","synonyms":[{"name":"PomBase_original_PRO_term_name: P-factor","type":"exact"},{"name":"map2/Clv:P-factor","type":"exact"}],"termid":"PR:000024855"}


id: MONDO:0008435
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Somatomedin, embryonic","secondary_identifiers":["MEDGEN:401103","OMIM:182400","UMLS:C1866879"],"synonyms":[{"name":"Somatomedin, embryonic","type":"exact"}],"termid":"MONDO:0008435","xrefs":{"Monarch":{"xref_id":"0008435"}}}


id: GO:0034900
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-(N-formyl)-formiminopyruvate + H2O = 3-formiminopyruvate + formate.","definition_xrefs":["UM-BBD_reactionID:r1399"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-(N-formyl)-formiminopyruvate hydrolase activity (obsolete GO:0034900)","termid":"GO:0034900"}


id: GO:0006832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete small molecule transport (obsolete GO:0006832)","synonyms":[{"name":"small molecule transport","type":"exact"}],"termid":"GO:0006832"}


id: PR:O42926
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps1302 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 13b (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.02c","synonyms":[{"name":"Spom972h-vps1302","type":"exact"}],"termid":"PR:O42926"}


id: GO:0016695
data:
  {"annotated_genes":["SJAG_02497"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008901"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen acts as an electron donor.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on hydrogen as donor","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.12.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on hydrogen as donor, other acceptors","type":"narrow"}],"termid":"GO:0016695","terms_by_termid":{"GO:0008901":null}}


id: PBO:0057636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1226","termid":"PBO:0057636"}


id: MONDO:0006420
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mucosa-associated lymphoid tissue lymphoma (MALT) that arises from the small intestine. The morphologic characteristics are similar to those seen in gastric MALT lymphomas, with the exception of the lymphoepithelial lesions that are less prominent in the small intestine.","definition_xrefs":["NCIT:C5635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine lymphoma","termid":"MONDO:0001852"},{"relation_name":"is_a","term_name":"spleen cancer","termid":"MONDO:0005966"},{"relation_name":"is_a","term_name":"MALT lymphoma","termid":"MONDO:0007650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"small intestinal mucosa-associated lymphoid tissue lymphoma","secondary_identifiers":["MEDGEN:233452","UMLS:C1336004"],"synonyms":[{"name":"MALT lymphoma of small bowel","type":"exact"},{"name":"MALT lymphoma of small intestine","type":"exact"},{"name":"MALT lymphoma of the small bowel","type":"exact"},{"name":"MALT lymphoma of the small intestine","type":"exact"},{"name":"MALToma of small bowel","type":"exact"},{"name":"MALToma of small intestine","type":"exact"},{"name":"MALToma of the small bowel","type":"exact"},{"name":"MALToma of the small intestine","type":"exact"},{"name":"mucosa-associated lymphoid tissue lymphoma of small bowel","type":"exact"},{"name":"mucosa-associated lymphoid tissue lymphoma of small intestine","type":"exact"},{"name":"mucosa-associated lymphoid tissue lymphoma of the small bowel","type":"exact"},{"name":"mucosa-associated lymphoid tissue lymphoma of the small intestine","type":"exact"},{"name":"small bowel MALT lymphoma","type":"exact"},{"name":"small bowel MALToma","type":"exact"},{"name":"small bowel mucosa-associated lymphoid tissue lymphoma","type":"exact"},{"name":"small intestinal mucosa-associated lymphoid tissue lymphoma","type":"exact"},{"name":"small intestine MALT lymphoma","type":"exact"},{"name":"small intestine MALToma","type":"exact"},{"name":"small intestine mucosa-associated lymphoid tissue lymphoma","type":"exact"}],"termid":"MONDO:0006420","xrefs":{"Monarch":{"xref_id":"0006420"}}}


id: GO:0036452
data:
  {"annotated_genes":["SJAG_05207","SJAG_04349","SJAG_03250","SJAG_00821","SJAG_04912","SJAG_01981","SJAG_01242","SJAG_00900","SJAG_03783","SJAG_00416","SJAG_04489","SJAG_04936","SJAG_04024"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91483,87594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000813"},{"annotations":[109282,110952,110123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000814"},{"annotations":[87427,102642,100385,97447,106047,103227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000815"},{"annotations":[90980,104460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033565"}]},"cv_name":"cellular_component","definition":"An endosomal sorting complex involved in membrane fission processes related to sorting of multivesicular bodies (MVB) in the endocytic pathway, cytokinesis and viral budding among other processes.","definition_xrefs":["PMID:16689637","VZ:1536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"endosome","termid":"GO:0005768"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00416":null,"SJAG_00821":null,"SJAG_00900":null,"SJAG_01242":null,"SJAG_01981":null,"SJAG_03250":null,"SJAG_03783":null,"SJAG_04024":null,"SJAG_04349":null,"SJAG_04489":null,"SJAG_04912":null,"SJAG_04936":null,"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737","GO:0031410","GO:0005768"],"is_obsolete":false,"name":"ESCRT complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:ESCRT"],"synonyms":[{"name":"endosomal sorting complex required for transport","type":"exact"}],"termid":"GO:0036452","terms_by_termid":{"GO:0000813":null,"GO:0000814":null,"GO:0000815":null,"GO:0033565":null}}


id: GO:0018784
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2-haloacid + H2O = (R)-2-hydroxyacid + halide.","definition_xrefs":["EC:3.8.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(S)-2-haloacid dehalogenase activity","secondary_identifiers":["RHEA:11192","UM-BBD_reactionID:r0090"],"synonyms":[{"name":"(S)-2-haloacid halidohydrolase activity","type":"related"},{"name":"2-haloacid dehalogenase activity","type":"exact"},{"name":"2-haloacid halidohydrolase activity","type":"related"},{"name":"2-haloalkanoic acid dehalogenase activity","type":"related"},{"name":"2-haloalkanoid acid halidohydrolase activity","type":"related"},{"name":"2-halocarboxylic acid dehalogenase II activity","type":"related"},{"name":"DL-2-haloacid dehalogenase activity","type":"related"},{"name":"L-2-haloacid dehalogenase activity","type":"related"},{"name":"L-DEX activity","type":"related"},{"name":"halocarboxylic acid halidohydrolase activity","type":"related"}],"termid":"GO:0018784"}


id: PBO:0014299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe sprecific protein","termid":"PBO:0014299"}


id: MONDO:0006642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute organic mental disorder induced by cessation or reduction in chronic alcohol consumption. Clinical characteristics include confusion; delusions; vivid hallucinations; tremor; agitation; insomnia; and signs of autonomic hyperactivity (e.g., elevated blood pressure and heart rate, dilated pupils, and diaphoresis). This condition may occasionally be fatal. It was formerly called delirium tremens. (From Adams et al., Principles of Neurology, 6th ed, p1175)","definition_xrefs":["MESH:D000430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol-induced mental disorder","termid":"MONDO:0002326"},{"relation_name":"is_a","term_name":"alcohol withdrawal","termid":"MONDO:0005433"},{"relation_name":"is_a","term_name":"alcohol-related disorders","termid":"MONDO:0021698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol withdrawal delirium","secondary_identifiers":["ICD9:291.0","MedDRA:10001610","SCTID:8635005","EFO:1000800","MEDGEN:1398","UMLS:C0001957"],"synonyms":[{"name":"alcohol withdrawal associated autonomic hyperactivity","type":"related"},{"name":"alcohol withdrawal hallucinosis","type":"related"},{"name":"alcohol withdrawal induced delirium Tremens","type":"related"},{"name":"alcohol withdrawal-induced delirium Tremens","type":"related"},{"name":"autonomic hyperactivity, alcohol withdrawal associated","type":"related"},{"name":"delirium Tremens","type":"related"},{"name":"delirium Tremens, alcohol withdrawal induced","type":"related"},{"name":"delirium, alcohol withdrawal","type":"related"},{"name":"hallucinosis, alcohol withdrawal","type":"related"}],"termid":"MONDO:0006642","xrefs":{"Monarch":{"xref_id":"0006642"}}}


id: PBO:0072381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 7","termid":"PBO:0072381"}


id: GO:0050485
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which X-H and Y-H form X-Y and the acceptor is disulfide.","definition_xrefs":["EC:1.21.4.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond","termid":"GO:0046992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor","synonyms":[{"name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulphide as acceptor","type":"exact"}],"termid":"GO:0050485"}


id: GO:0008538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the activation of the proteasome, a large multisubunit complex which performs regulated ubiquitin-dependent cytosolic and nuclear proteolysis.","definition_xrefs":["GOC:rn","PMID:10428771"],"gene_count":0,"genotype_count":0,"name":"obsolete proteasome activator activity (obsolete GO:0008538)","synonyms":[{"name":"PA28","type":"narrow"},{"name":"proteasome activator activity","type":"exact"}],"termid":"GO:0008538"}


id: SO:0001414
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The point within a chromosome where a insertion begins or ends.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_breakpoint","termid":"SO:0001021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insertion_breakpoint","synonyms":[{"name":"insertion breakpoint","type":"exact"}],"termid":"SO:0001414"}


id: GO:0035374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to chondroitin sulfate, a glycosaminoglycan made up of two alternating monosaccharides: D-glucuronic acid (GlcA) and N-acetyl-D-galactosamine (GalNAc).","definition_xrefs":["GOC:kmv","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan binding","termid":"GO:0005539"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"chondroitin sulfate binding","termid":"GO:0035374"}


id: PBO:0046528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum protein 27","termid":"PBO:0046528"}


id: MONDO:0042961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Cowden disease","termid":"MONDO:0016063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"sacral hemangiomas multiple congenital abnormalities","secondary_identifiers":["UMLS:C2931443","MESH:C537222","GARD:317","MEDGEN:419414"],"termid":"MONDO:0042961","xrefs":{"Monarch":{"xref_id":"0042961"}}}


id: MONDO:0014188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0014188 (obsolete MONDO:0014188)","termid":"MONDO:0014188","xrefs":{"Monarch":{"xref_id":"0014188"}}}


id: GO:0010296
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein C-terminal S-farnesyl-L-cysteine methyl ester + H2O = protein C-terminal S-farnesyl-L-cysteine + methanol + H+.","definition_xrefs":["RHEA:48520","PMID:16870359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methylesterase activity","termid":"GO:0051723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"prenylcysteine methylesterase activity","secondary_identifiers":["MetaCyc:RXN-8409"],"termid":"GO:0010296"}


id: PR:O13927
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tht2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twin horsetail protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.07","synonyms":[{"name":"Spom972h-tht2","type":"exact"},{"name":"meiotically up-regulated gene 22 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13927"}


id: PBO:0090242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like protein modifier Urm1","termid":"PBO:0090242"}


id: MONDO:0007585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any exostoses, multiple in which the cause of the disease is a mutation in the EXT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary multiple osteochondromas","termid":"MONDO:0005508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exostoses, multiple, type 1","secondary_identifiers":["GARD:2204","OMIM:133700"],"synonyms":[{"name":"EXT","type":"related"},{"name":"EXT1 exostoses, multiple","type":"exact"},{"name":"diaphyseal Aclasis","type":"related"},{"name":"exostoses, multiple caused by mutation in EXT1","type":"exact"},{"name":"exostoses, multiple, type 1","type":"exact"},{"name":"exostoses, multiple, type I","type":"related"},{"name":"multiple cartilaginous exostoses","type":"related"},{"name":"multiple osteochondromas","type":"related"},{"name":"osteochondromatosis","type":"related"}],"termid":"MONDO:0007585","xrefs":{"Monarch":{"xref_id":"0007585"}}}


id: PBO:0065777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyroglutamylated RFamide peptide receptor","termid":"PBO:0065777"}


id: PBO:0050414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNRNPDL pseudogene 3","termid":"PBO:0050414"}


id: PBO:0003907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3-containing 90S preribosome complex subunit (predicted)","termid":"PBO:0003907"}


id: GO:0070281
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to pyridoxamine, 4-(aminomethyl)-5-(hydroxymethyl)-2-methylpyridin-3-ol, a form of vitamin B6.","definition_xrefs":["GOC:mah","CHEBI:16410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"vitamin B6 binding","termid":"GO:0070279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"pyridoxamine binding","termid":"GO:0070281"}


id: PBO:0044310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 reductase like","termid":"PBO:0044310"}


id: MONDO:0009013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"convulsive disorder, familial, with prenatal or early onset","secondary_identifiers":["OMIM:217200","MESH:C565678","UMLS:C1857575","MEDGEN:387859"],"synonyms":[{"name":"convulsive disorder, familial, with prenatal or early onset","type":"exact"}],"termid":"MONDO:0009013","xrefs":{"Monarch":{"xref_id":"0009013"}}}


id: PR:O74518
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cid12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) RNA polymerase cid12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.12","synonyms":[{"name":"PAP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cid12","type":"exact"},{"name":"caffeine-induced death protein 12 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"polynucleotide adenylyltransferase cid12 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74518"}


id: PBO:0005248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retromer complex subunit Vps5","termid":"PBO:0005248"}


id: PBO:0108911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUP50 pseudogene 4","termid":"PBO:0108911"}


id: FYPO:0004849
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119110,119111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}],"single_locus_phenotype":[{"annotations":[119103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a protein metabolic process is normal (i.e. indistinguishable from wild type). A protein metabolic process is a series of chemical reactions and pathways involving a specific protein.","definition_xrefs":["GO:0019538","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process","termid":"FYPO:0002496"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03689","SJAG_03118","SJAG_02621"],"name":"normal protein metabolic process","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"normal cellular protein metabolic process","type":"exact"},{"name":"normal protein metabolism","type":"exact"}],"termid":"FYPO:0004849","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0006989":null}}


id: PBO:0087181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit A14","termid":"PBO:0087181"}


id: PBO:0079874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF3A pseudogene 1","termid":"PBO:0079874"}


id: RO:0002179
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between an collecting structure and another structure, where the collecting structure acts as a conduit channeling fluid, substance or energy away from the other structure.","direct_ancestors":[{"relation_name":"is_a","term_name":"connected_to","termid":"RO:0002170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drains","termid":"RO:0002179"}


id: GO:0042056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Providing the environmental signal that initiates the directed movement of a motile cell or organism towards a higher concentration of that signal.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor ligand activity","termid":"GO:0048018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0140677","GO:0005515","GO:0098772"],"is_obsolete":false,"name":"chemoattractant activity","synonyms":[{"name":"attractant","type":"broad"}],"termid":"GO:0042056"}


id: PBO:0044893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEP domain containing 5, GATOR1 subcomplex subunit","termid":"PBO:0044893"}


id: MONDO:1012002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitreous degeneration, non-human animal","secondary_identifiers":["OMIA:002409"],"termid":"MONDO:1012002","xrefs":{"Monarch":{"xref_id":"1012002"}}}


id: PBO:0082693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the INO80 chromatiin remodeling complex; target of the Mec1p/Tel1p DNA damage signaling pathway; proposed to link chromatin remodeling to replication checkpoint responses","termid":"PBO:0082693"}


id: PBO:0084436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Malate synthase; can accept butyryl-CoA as acyl-CoA donor in addition to traditional substrate acetyl-CoA; recycles glyoxylate generated during allantoin degradation; SWAT-GFP and mCherry fusion proteins localize to the cytosol; expression sensitive to nitrogen catabolite repression and induced by allophanate, an intermediate in allantoin degradation","termid":"PBO:0084436"}


id: PBO:0064492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit E","termid":"PBO:0064492"}


id: PBO:0038921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor G3","termid":"PBO:0038921"}


id: GO:0015917
data:
  {"annotated_genes":["SJAG_00669","SJAG_04370"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107009],"is_not":false,"summary":null,"term":"GO:0015917"},{"annotations":[68170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140331"}]},"cv_name":"biological_process","definition":"The directed movement of aminophospholipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Aminophospholipids contain phosphoric acid as a mono- or diester and an amino (NH2) group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transport","termid":"GO:0015914"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00669":null,"SJAG_04370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"aminophospholipid transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015917","terms_by_termid":{"GO:0015917":null,"GO:0140331":null}}


id: PBO:0005839
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.5.99.8","termid":"PBO:0005839"}


id: MONDO:0021160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An cystitis caused by infection with Neisseria gonorrhoeae.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonorrhea","termid":"MONDO:0004277"},{"relation_name":"is_a","term_name":"bacterial urinary tract infection","termid":"MONDO:0005247"},{"relation_name":"is_a","term_name":"cystitis","termid":"MONDO:0006032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonococcal cystitis","secondary_identifiers":["SCTID:197848003","UMLS:C0473230","MEDGEN:633096","icd11.foundation:638246732"],"synonyms":[{"name":"Neisseria gonorrhoeae caused cystitis","type":"exact"},{"name":"Neisseria gonorrhoeae cystitis","type":"exact"}],"termid":"MONDO:0021160","xrefs":{"Monarch":{"xref_id":"0021160"}}}


id: GO:0048017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals in which a cell uses an inositol-containing lipid to convert a signal into a response. Inositol lipids include the phosphoinositides (phosphatidylinositol and its phosphorylated derivatives), ceramides containing inositol, and inositol glycolipids.","definition_xrefs":["GOC:ceb","PMID:16088939","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol lipid-mediated signaling (obsolete GO:0048017)","synonyms":[{"name":"inositol lipid-mediated signal transduction","type":"exact"},{"name":"inositol lipid-mediated signalling","type":"exact"},{"name":"inositol phospholipid-mediated signaling","type":"narrow"}],"termid":"GO:0048017"}


id: PBO:0076379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGF-beta activated kinase 1/MAP3K7 binding protein 3 pseudogene 1","termid":"PBO:0076379"}


id: GO:0045628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T-helper 2 cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type 2 immune response","termid":"GO:0002828"},{"relation_name":"is_a","term_name":"regulation of T-helper cell differentiation","termid":"GO:0045622"},{"relation_name":"regulates","term_name":"T-helper 2 cell differentiation","termid":"GO:0045064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T-helper 2 cell differentiation","synonyms":[{"name":"regulation of T-helper 2 cell development","type":"related"}],"termid":"GO:0045628"}


id: MONDO:0004950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the stomach.","direct_ancestors":[{"relation_name":"is_a","term_name":"gastric cancer","termid":"MONDO:0001056"},{"relation_name":"is_a","term_name":"digestive system carcinoma","termid":"MONDO:0006181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"gastric carcinoma","secondary_identifiers":["UMLS:C0699791","SCTID:92756002","ICD9:230.2","DOID:10538","MEDGEN:147066","NCIT:C4911","EFO:0000178","ICD9:151.3","DOID:5517","SCTID:187741001"],"synonyms":[{"name":"Ca fundus - stomach","type":"narrow"},{"name":"cancer of fundus of stomach","type":"narrow"},{"name":"cancer of stomach","type":"broad"},{"name":"cancer of the stomach","type":"broad"},{"name":"carcinoma of stomach","type":"exact"},{"name":"carcinoma of the stomach","type":"exact"},{"name":"fundus of stomach cancer","type":"narrow"},{"name":"gastric (stomach) cancer","type":"broad"},{"name":"gastric cancer","type":"broad"},{"name":"gastric cancer, NOS","type":"broad"},{"name":"gastric carcinoma","type":"exact"},{"name":"gastric fundus cancer","type":"narrow"},{"name":"malignant fundus of stomach neoplasm","type":"narrow"},{"name":"malignant neoplasm of fundus of stomach","type":"narrow"},{"name":"malignant tumor of fundus of stomach","type":"narrow"},{"name":"malignant tumour of fundus of stomach","type":"narrow"},{"name":"stomach cancer","type":"broad"},{"name":"stomach carcinoma","type":"exact"}],"termid":"MONDO:0004950","xrefs":{"Monarch":{"xref_id":"0004950"}}}


id: GO:0048325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of axial mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of axial mesodermal cell fate determination","termid":"GO:0048324"},{"relation_name":"is_a","term_name":"negative regulation of mesodermal cell fate determination","termid":"GO:0048335"},{"relation_name":"negatively_regulates","term_name":"axial mesodermal cell fate determination","termid":"GO:0048323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of axial mesodermal cell fate determination","synonyms":[{"name":"down regulation of axial mesodermal cell fate determination","type":"exact"},{"name":"down-regulation of axial mesodermal cell fate determination","type":"exact"},{"name":"downregulation of axial mesodermal cell fate determination","type":"exact"},{"name":"inhibition of axial mesodermal cell fate determination","type":"narrow"}],"termid":"GO:0048325"}


id: PBO:0044944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase","termid":"PBO:0044944"}


id: GO:0060260
data:
  {"annotated_genes":["SJAG_00904","SJAG_03421","SJAG_03590","SJAG_04647","SJAG_02551","SJAG_04705","SJAG_00297","SJAG_05203","SJAG_02391","SJAG_01952","SJAG_03061","SJAG_05341","SJAG_00150","SJAG_02849","SJAG_03573","SJAG_00342","SJAG_02494","SJAG_04099","SJAG_03622","SJAG_04820","SJAG_00766","SJAG_01771","SJAG_00909","SJAG_01403"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114683,89185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"},{"annotations":[105728,108523,93934,105861,90161,93824,98177,114794,105533,108237,86931,94866,98528,118431,108210,89845,114227,95350,101456,105185,102916,103177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060261"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a process involved in starting transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:txnOH","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase II","termid":"GO:0006357"},{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription initiation","termid":"GO:2000142"},{"relation_name":"regulates","term_name":"transcription initiation at RNA polymerase II promoter","termid":"GO:0006367"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00297":null,"SJAG_00342":null,"SJAG_00766":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_01403":null,"SJAG_01771":null,"SJAG_01952":null,"SJAG_02391":null,"SJAG_02494":null,"SJAG_02551":null,"SJAG_02849":null,"SJAG_03061":null,"SJAG_03421":null,"SJAG_03573":null,"SJAG_03590":null,"SJAG_03622":null,"SJAG_04099":null,"SJAG_04647":null,"SJAG_04705":null,"SJAG_04820":null,"SJAG_05203":null,"SJAG_05341":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150","GO:0006355"],"is_obsolete":false,"name":"regulation of transcription initiation by RNA polymerase II","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-212436"],"synonyms":[{"name":"regulation of transcription initiation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0060260","terms_by_termid":{"GO:0045899":null,"GO:0060261":null}}


id: GO:0035354
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex containing Toll-like receptor 1 (TLR1) and Toll-like receptor 2 (TLR2).","definition_xrefs":["PMID:17889651","GOC:signaling","PMID:21481769","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Toll-like receptor 1-Toll-like receptor 2 protein complex","secondary_identifiers":["GO:0038125"],"synonyms":[{"name":"TLR1-TLR2 protein complex","type":"exact"},{"name":"TLR1:TLR2 complex","type":"exact"},{"name":"TLR2:TLR1 heterodimer","type":"exact"},{"name":"toll-like receptor TLR1:TLR2 heterodimeric complex","type":"exact"}],"termid":"GO:0035354"}


id: GO:0160132
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell part that is composed of multifold plasma membrane of the epidermis where it is in direct contact with apical extracellular matrix. Meisosome, or multiple eisome is named because of its superficial similarity to yeast eisosome.","definition_xrefs":["PMID:36913486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"meisosome","termid":"GO:0160132"}


id: PBO:0073398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 1","termid":"PBO:0073398"}


id: PBO:0089976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNP assembly factor Naf1","termid":"PBO:0089976"}


id: PATO:0000596
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A volume which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased size","termid":"PATO:0000587"},{"relation_name":"is_a","term_name":"volume","termid":"PATO:0000918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased volume","synonyms":[{"name":"low volume","type":"exact"},{"name":"small volume","type":"related"}],"termid":"PATO:0000596"}


id: MONDO:0007673
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucoglycinuria","secondary_identifiers":["MESH:C562670","UMLS:C0268536","icd11.foundation:2034546543","MEDGEN:78686","OMIM:138070"],"synonyms":[{"name":"Glucoglycinuria","type":"exact"}],"termid":"MONDO:0007673","xrefs":{"Monarch":{"xref_id":"0007673"}}}


id: GO:0070018
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A receptor complex that consists of two transforming growth factor beta (TGF-beta) type I receptor monomers. TGF-beta type I receptor dimers form in the presence or absence of ligand, and can associate with ligand-bound TGF-beta type II receptor dimers.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta type I receptor homodimeric complex (obsolete GO:0070018)","synonyms":[{"name":"TGF-beta type I receptor complex","type":"exact"},{"name":"TGF-beta type I receptor dimer","type":"exact"},{"name":"TGFBR1 homodimer","type":"exact"},{"name":"transforming growth factor beta type I receptor complex","type":"exact"}],"termid":"GO:0070018"}


id: MONDO:0000803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergy involving a Penaeus monodon.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete tiger prawn allergy (obsolete MONDO:0000803)","secondary_identifiers":["DOID:0060528"],"synonyms":[{"name":"Penaeus monodon allergic disease","type":"exact"},{"name":"Penaeus monodon allergy","type":"exact"},{"name":"Penaeus monodon caused allergic disease","type":"exact"},{"name":"allergy of Penaeus monodon","type":"exact"}],"termid":"MONDO:0000803","xrefs":{"Monarch":{"xref_id":"0000803"}}}


id: MONDO:0020812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The result of pathological changes in the hard tissue of a tooth caused by carious lesions, mechanical factors, or trauma, which render the pulp susceptible to bacterial invasion from the external environment.","definition_xrefs":["MESH:D003789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dental pulp disorder","termid":"MONDO:0003394"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exposure, dental pulp","secondary_identifiers":["UMLS:C0011406","MEDGEN:41473"],"synonyms":[{"name":"DENT PULP EXPOSURE","type":"related"},{"name":"Dental Pulp Exposure","type":"related"},{"name":"EXPOSURE DENT PULP","type":"related"},{"name":"Exposure of tooth pulp","type":"related"},{"name":"Exposure, Dental Pulp","type":"related"},{"name":"PULP EXPOSURE DENT","type":"related"},{"name":"Pulp Exposure, Dental","type":"related"}],"termid":"MONDO:0020812","xrefs":{"Monarch":{"xref_id":"0020812"}}}


id: PBO:0050115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 25","termid":"PBO:0050115"}


id: PBO:0027731
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_cellular_response_to_calcium_ion","termid":"PBO:0027731"}


id: FYPO:0005503
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[118755],"is_not":false,"summary":null,"term":"FYPO:0005503"}],"single_locus_phenotype":[{"annotations":[118749,118804,118805,118807],"is_not":false,"summary":null,"term":"FYPO:0005503"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is normally localized to both cell tips is instead found at only one tip.","definition_xrefs":["PomBase:mah","PMID:26749213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip during vegetative growth","termid":"FYPO:0001584"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_01143":null,"SJAG_01794":null,"SJAG_02392":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_04280":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_02392"],"name":"abnormally monopolar protein localization to cell tip","references_by_uniquename":{"PMID:25866389":null,"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_04280","SJAG_02392"],"single_locus_genotype_uniquenames":["pom1delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal monopolar protein localization to one cell end","type":"exact"},{"name":"abnormally monopolar protein localisation to cell tip","type":"exact"},{"name":"abnormally monopolar protein localization to cell end","type":"exact"},{"name":"abnormally monopolar protein localization to cell tip during mitotic cell cycle","type":"related"},{"name":"abnormally monopolar protein localization to cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0005503","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0005503":null}}


id: PBO:0113146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-dependent zinc transferase; couples GTP hydrolysis to the activation of methionine aminopeptidase Map1p, especially during zinc starvation; deletion confers reduced fitness in saline; contains GTPase sequence motifs and a CxCC metal-binding motif","termid":"PBO:0113146"}


id: MONDO:0018815
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A locally aggressive and destructive benign cystic lesion of the bone. It is characterized by the formation of multiloculated hemorrhagic cystic spaces which are separated by fibrous septa. It can arise from any bone, but usually affects the metaphysis of long bones. It manifests with pain and swelling and may recur following curettage.","definition_xrefs":["NCIT:C3516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone neoplasm","termid":"MONDO:0019060"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aneurysmal bone cyst","secondary_identifiers":["GARD:21982","UMLS:C0152244","Orphanet:480553","EFO:1001760","icd11.foundation:1603788294","MEDGEN:57758","MESH:D017824","HP:0012063","ICD9:733.22","OMIM:606179","SCTID:203468000"],"synonyms":[{"name":"ABC","type":"exact"},{"name":"aneurysmal bone cyst","type":"exact"},{"name":"aneurysmal bone cyst (disease)","type":"exact"},{"name":"aneurysmal bone cysts","type":"exact"},{"name":"aneurysmal cyst of bone","type":"exact"},{"name":"aneurysmal cyst of the bone","type":"exact"}],"termid":"MONDO:0018815","xrefs":{"Monarch":{"xref_id":"0018815"}}}


id: PR:P78820
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An acetyl-CoA carboxylase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA carboxylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56E4.04c","secondary_identifiers":["UniProtKB:P78820"],"synonyms":[{"name":"ACC (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ACACA","type":"exact"},{"name":"cell untimely torn protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78820"}


id: PBO:0090136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein disulfide isomerase Pdi2","termid":"PBO:0090136"}


id: GO:0016643
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces an iron-sulfur protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor","secondary_identifiers":["EC:1.4.7.-"],"synonyms":[{"name":"oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulphur protein as acceptor","type":"exact"}],"termid":"GO:0016643"}


id: PATO:0000885
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000885 male fertility value (obsolete PATO:0000885)","termid":"PATO:0000885"}


id: PBO:0005746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfonate dioxygenase (predicted)","termid":"PBO:0005746"}


id: PBO:0002399
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.11","termid":"PBO:0002399"}


id: PBO:0079437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma complex associated protein 5","termid":"PBO:0079437"}


id: GO:0048032
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a galacturonate. Galacturonate is the anion of galacturonic acid, the uronic acid formally derived from galactose by oxidation of the hydroxymethylene group at C-6 to a carboxyl group.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"galacturonate binding","synonyms":[{"name":"galacturonic acid binding","type":"exact"}],"termid":"GO:0048032"}


id: FYPO:0006267
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere clustering and tethering at the nuclear periphery is increased during mitotic metaphase.","definition_xrefs":["PMID:25778919","GO:0120109","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal telomere localization","termid":"FYPO:0007418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased telomere clustering and tethering at nuclear periphery during mitotic metaphase","synonyms":[{"name":"decreased mitotic telomere dispersion during metaphase","type":"exact"},{"name":"increased telomere clustering and tethering at nuclear periphery during metaphase of mitotic cell cycle","type":"exact"},{"name":"increased telomere clustering and tethering at nuclear periphery during mitotic metaphase during vegetative growth","type":"exact"},{"name":"increased telomere clustering at nuclear periphery during mitotic metaphase","type":"related"}],"termid":"FYPO:0006267"}


id: PBO:0060104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 5","termid":"PBO:0060104"}


id: PBO:0064568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POP5 homolog, ribonuclease P/MRP subunit","termid":"PBO:0064568"}


id: GO:1900871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent alteration within the chloroplast of one or more nucleotides within an mRNA to produce an mRNA molecule with a sequence that differs from that coded genetically.","definition_xrefs":["GOC:TermGenie","PMID:1653905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA modification","termid":"GO:0016556"},{"relation_name":"is_a","term_name":"chloroplast RNA modification","termid":"GO:1900865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016071"],"is_obsolete":false,"name":"chloroplast mRNA modification","synonyms":[{"name":"chloroplast mRNA editing","type":"narrow"},{"name":"mRNA editing in chloroplast","type":"narrow"}],"termid":"GO:1900871"}


id: GO:0102522
data:
  {"annotated_genes":["SJAG_04735"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97564],"is_not":false,"summary":null,"term":"GO:0102522"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 4-demethylwyosine37 in tRNAPhe = 5'-S-methyl-5'-thioadenosine + H+ + 7-[(3S)-3-amino-3-carboxypropyl]-4-demethylwyosine37 in tRNAPhe.","definition_xrefs":["EC:2.5.1.114","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04735":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140101","GO:0016765","GO:0016740","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"tRNA 4-demethylwyosine alpha-amino-alpha-carboxypropyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:36355","MetaCyc:RXN-14518"],"termid":"GO:0102522","terms_by_termid":{"GO:0102522":null}}


id: PBO:0005098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule-associated protein Dis1","termid":"PBO:0005098"}


id: MONDO:1011170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteochondrosis that occurs in chicken.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"osteochondrosis, non-human animal","termid":"MONDO:1010299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteochondrosis, chicken","secondary_identifiers":["OMIA:000750-9031"],"termid":"MONDO:1011170","xrefs":{"Monarch":{"xref_id":"1011170"}}}


id: MONDO:0014476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary episodic ataxia","termid":"MONDO:0016227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"episodic ataxia type 8","secondary_identifiers":["GARD:17665","OMIM:616055","DOID:0050996","MEDGEN:863545","Orphanet:401953","UMLS:C4015108"],"synonyms":[{"name":"EA8","type":"related"},{"name":"episodic ataxia type 8","type":"exact"},{"name":"episodic ataxia with slurred speech","type":"related"},{"name":"episodic ataxia, type 8","type":"related"}],"termid":"MONDO:0014476","xrefs":{"Monarch":{"xref_id":"0014476"}}}


id: MONDO:0003280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital locomotor ataxia of lambs, thought to be associated with copper deficiency. It is characterized clinically by progressive incoordination of the hind limbs and pathologically by disruption of neuron and myelin development in the central nervous system. It is caused by a deficiency of metabolizable copper in the ewe during the last half of her pregnancy. (Dorland, 28th ed; Stedman, 26th ed)","definition_xrefs":["MESH:D013540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sheep disease","termid":"MONDO:0024985"},{"relation_name":"is_a","term_name":"nutritional deficiency disease, non-human animal","termid":"MONDO:0700103"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swayback","secondary_identifiers":["DOID:5112","SCTID:61960001"],"synonyms":[{"name":"swayback of sheep","type":"exact"}],"termid":"MONDO:0003280","xrefs":{"Monarch":{"xref_id":"0003280"}}}


id: MONDO:0020298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Prader-Willi syndrome","termid":"MONDO:0008300"},{"relation_name":"is_a","term_name":"chromosome 15 disorder","termid":"MONDO:0700022"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0700092"],"is_obsolete":false,"name":"Prader-Willi syndrome due to maternal uniparental disomy of chromosome 15","secondary_identifiers":["Orphanet:98754","UMLS:C5680343","GARD:16861","MEDGEN:1826079"],"synonyms":[{"name":"Prader-Willi syndrome due to maternal uniparental disomy of chromosome type 15","type":"exact"},{"name":"UPD(15)mat","type":"exact"}],"termid":"MONDO:0020298","xrefs":{"Monarch":{"xref_id":"0020298"}}}


id: GO:0052713
data:
  {"annotated_genes":["SJAG_01219"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052714"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: inositol phosphorylceramide + H2O = C26-phytoceramide + phosphorylinositol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphosphingolipid phospholipase activity","termid":"GO:0052712"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"inositol phosphorylceramide phospholipase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0052713","terms_by_termid":{"GO:0052714":null}}


id: PBO:0013120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Dbl5","termid":"PBO:0013120"}


id: SO:0000471
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The gene product is involved in its own transcriptional regulation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptionally_regulated","termid":"SO:0000123"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoregulated","termid":"SO:0000471"}


id: PBO:0045643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 1","termid":"PBO:0045643"}


id: PBO:0017074
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA substrate Km 20 nM, Vmax 1.1-2.5 nM/min","termid":"PBO:0017074"}


id: MONDO:0019659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pfeiffer syndrome type 1 (PS1) is a mild to moderately severe type of Pfeiffer syndrome (PS), characterized by bicoronal craniosynostosis, variable finger and toe malformations, and in most cases, normal intellectual development.","definition_xrefs":["Orphanet:93258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Pfeiffer syndrome","termid":"MONDO:0007043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Pfeiffer syndrome type 1","secondary_identifiers":["UMLS:C5438812","GARD:16807","MEDGEN:1726699","icd11.foundation:490354109"],"synonyms":[{"name":"Pfeiffer syndrome type 1","type":"exact"},{"name":"classic Pfeiffer syndrome","type":"exact"}],"termid":"MONDO:0019659","xrefs":{"Monarch":{"xref_id":"0019659"}}}


id: PBO:0071084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 86","termid":"PBO:0071084"}


id: PBO:0052191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium calcium-activated channel subfamily M regulatory beta subunit 1","termid":"PBO:0052191"}


id: PBO:0002463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3b (p84)","termid":"PBO:0002463"}


id: PBO:0110316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GEF for Sar1, WD repeat protein Spo14","termid":"PBO:0110316"}


id: PR:P87051
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptidyl-prolyl cis-trans isomerase-like 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11071:SF41","OMA:SCHPO00551","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase ppi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.03","secondary_identifiers":["UniProtKB:P87051"],"synonyms":[{"name":"PPIase ppi1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPIL1","type":"exact"},{"name":"cyclophilin ppi1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"rotamase ppi1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87051"}


id: GO:0048783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cyanophore differentiation.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cyanophore differentiation","termid":"GO:0048781"},{"relation_name":"is_a","term_name":"positive regulation of pigment cell differentiation","termid":"GO:0050942"},{"relation_name":"positively_regulates","term_name":"cyanophore differentiation","termid":"GO:0048774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cyanophore differentiation","synonyms":[{"name":"activation of cyanophore differentiation","type":"narrow"},{"name":"stimulation of cyanophore differentiation","type":"narrow"},{"name":"up regulation of cyanophore differentiation","type":"exact"},{"name":"up-regulation of cyanophore differentiation","type":"exact"},{"name":"upregulation of cyanophore differentiation","type":"exact"}],"termid":"GO:0048783"}


id: GO:0006246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dTDP, deoxyribosylthymine diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside diphosphate catabolic process","termid":"GO:0009198"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide catabolic process","termid":"GO:0009223"},{"relation_name":"is_a","term_name":"dTDP metabolic process","termid":"GO:0046072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dTDP catabolic process","synonyms":[{"name":"dTDP breakdown","type":"exact"},{"name":"dTDP catabolism","type":"exact"},{"name":"dTDP degradation","type":"exact"}],"termid":"GO:0006246"}


id: GO:0010870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency or rate of receptor biosynthesis. Receptor biosynthesis is the collection of chemical reactions and pathways resulting in the formation of a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.","definition_xrefs":["GOC:BHF","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of receptor biosynthetic process (obsolete GO:0010870)","termid":"GO:0010870"}


id: GO:1904702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to adherens junction. An adherens junction is a cell-cell junction composed of the epithelial cadherin-catenin complex at which the cytoplasmic face of the plasma membrane is attached to actin filaments.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:aruk","GOC:bc","GOC:kmv","PMID:26412237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell-cell junction","termid":"GO:0150106"},{"relation_name":"regulates","term_name":"protein localization to adherens junction","termid":"GO:0071896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to adherens junction","synonyms":[{"name":"regulation of protein localisation in cell-cell adherens junction","type":"exact"},{"name":"regulation of protein localisation to cell-cell adherens junction","type":"exact"},{"name":"regulation of protein localization in cell-cell adherens junction","type":"exact"}],"termid":"GO:1904702"}


id: PBO:0071549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 14","termid":"PBO:0071549"}


id: PR:O74441
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ctl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline transporter-like protein ctl1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.11c","synonyms":[{"name":"Spom972h-ctl1","type":"exact"}],"termid":"PR:O74441"}


id: PBO:0013843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPT oligopeptide transporter family protein Opt3","termid":"PBO:0013843"}


id: PBO:0043948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin beta A4","termid":"PBO:0043948"}


id: GO:0015896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of nalidixic acid into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Nalidixic acid is a synthetic antibiotic that interferes with DNA gyrase and inhibits prokaryotic replication.","definition_xrefs":["PMID:12702699","PubChem_Compound:4221","GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete nalidixic acid transport (obsolete GO:0015896)","termid":"GO:0015896"}


id: PBO:0059463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSH2 overlapping transcript 1","termid":"PBO:0059463"}


id: GO:1904450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of aspartate secretion.","definition_xrefs":["PMID:2342602","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"positive regulation of secretion by cell","termid":"GO:1903532"},{"relation_name":"is_a","term_name":"regulation of aspartate secretion","termid":"GO:1904448"},{"relation_name":"positively_regulates","term_name":"aspartate secretion","termid":"GO:0061528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of aspartate secretion","synonyms":[{"name":"activation of aspartate secretion","type":"narrow"},{"name":"up regulation of aspartate secretion","type":"exact"},{"name":"up-regulation of aspartate secretion","type":"exact"},{"name":"upregulation of aspartate secretion","type":"exact"}],"termid":"GO:1904450"}


id: PR:O14156
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein phosphatase 1K, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01064","PANTHER:PTHR13832:SF93","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2C homolog 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.03c","secondary_identifiers":["UniProtKB:O14156"],"synonyms":[{"name":"PP2C-4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPM1K","type":"exact"}],"termid":"PR:O14156"}


id: PBO:0067725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 23","termid":"PBO:0067725"}


id: PBO:0054627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2032","termid":"PBO:0054627"}


id: GO:0003944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycoprotein N-acetyl-D-glucosaminyl-phospho-D-mannose + H2O = N-acetyl-D-glucosamine + glycoprotein phospho-D-mannose.","definition_xrefs":["EC:3.1.4.45"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosaminidase activity","termid":"GO:0015929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase activity","secondary_identifiers":["MetaCyc:3.1.4.45-RXN","RHEA:24372"],"synonyms":[{"name":"2-acetamido-2-deoxy-alpha-D-glucose 1-phosphodiester acetamidodeoxyglucohydrolase activity","type":"related"},{"name":"alpha-N-acetyl-D-glucosamine-1-phosphodiester N-acetylglucosaminidase activity","type":"related"},{"name":"alpha-N-acetylglucosaminyl phosphodiesterase activity","type":"related"},{"name":"glycoprotein-N-acetyl-D-glucosaminyl-phospho-D-mannose N-acetyl-D-glucosaminylphosphohydrolase activity","type":"related"},{"name":"lysosomal alpha-N-acetylglucosaminidase activity","type":"narrow"},{"name":"phosphodiester glycosidase activity","type":"related"}],"termid":"GO:0003944"}


id: MONDO:0044874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most common subtype of the myelodysplastic syndromes affecting children. It is characterized by persistent cytopenia with less than 5% blasts in the bone marrow and less than 2% blasts in the peripheral blood.","definition_xrefs":["NCIT:C82596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"refractory hematologic cancer","termid":"MONDO:0004111"},{"relation_name":"is_a","term_name":"childhood myelodysplastic syndrome","termid":"MONDO:0044873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"refractory cytopenia of childhood","secondary_identifiers":["ONCOTREE:RCYC","MEDGEN:417430","icd11.foundation:699075426","UMLS:C2826323"],"synonyms":[{"name":"RCC","type":"exact"},{"name":"refractory cytopenia of childhood","type":"exact"}],"termid":"MONDO:0044874","xrefs":{"Monarch":{"xref_id":"0044874"}}}


id: PBO:0058193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4486","termid":"PBO:0058193"}


id: GO:0047264
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: heteroglycan + GDP-mannose = alpha-D-mannosylheteroglycan + GDP. 1,2- and 1,3-mannosyl bonds are formed.","definition_xrefs":["EC:2.4.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase activity","termid":"GO:0000030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"heteroglycan alpha-mannosyltransferase activity","synonyms":[{"name":"GDP mannose alpha-mannosyltransferase activity","type":"related"},{"name":"GDP-mannose:heteroglycan 2-(or 3-)-alpha-D-mannosyltransferase activity","type":"related"},{"name":"guanosine diphosphomannose-heteroglycan alpha-mannosyltransferase activity","type":"related"},{"name":"heteropolysaccharide alpha-mannosyltransferase activity","type":"exact"}],"termid":"GO:0047264"}


id: PBO:0074860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 46","termid":"PBO:0074860"}


id: MONDO:0007081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete allergic bronchopulmonary aspergillosis (obsolete MONDO:0007081)","termid":"MONDO:0007081","xrefs":{"Monarch":{"xref_id":"0007081"}}}


id: PBO:0079372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 7","termid":"PBO:0079372"}


id: PBO:0000885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 2' O-ribose methyltransferase Mrm2-like (predicted)","termid":"PBO:0000885"}


id: PBO:0052709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 1","termid":"PBO:0052709"}


id: GO:0008364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synthesis and deposition of a chitin-based pupal cuticle. At the end of the prepupal period the insect is covered by the pupal cuticle which continues to be elaborated into the pupal period. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cuticle development involved in chitin-based cuticle molting cycle","termid":"GO:0042337"},{"relation_name":"part_of","term_name":"pupal development","termid":"GO:0035209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pupal chitin-based cuticle development","synonyms":[{"name":"pupal cuticle anabolism","type":"broad"},{"name":"pupal cuticle formation","type":"broad"},{"name":"pupal cuticle synthesis","type":"broad"}],"termid":"GO:0008364"}


id: MONDO:0009792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ichthyosis-oral and digital anomalies syndrome is characterized by ichthyosis, unusual facies (small mouth with a thin upper lip and lower lip with a midline groove) and digital anomalies (tapered fingers with a lack of distal flexion creases and wide spacing between the second and third fingers). It has been described in two sibs born to first cousin parents. Transmission appears to be autosomal recessive.","definition_xrefs":["Orphanet:2272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"inherited ichthyosis","termid":"MONDO:0015947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ichthyosis-oral and digital anomalies syndrome","secondary_identifiers":["UMLS:C1850268","GARD:2960","MESH:C536272","MEDGEN:342457","OMIM:258840"],"synonyms":[{"name":"Clayton Smith-Donnai syndrome","type":"exact"},{"name":"ichthyosis tapered fingers midline groove up","type":"related"},{"name":"oral and digital anomalies with ichthyosis","type":"related"},{"name":"unusual facies, digital abnormalities, and ichthyosis","type":"related"}],"termid":"MONDO:0009792","xrefs":{"Monarch":{"xref_id":"0009792"}}}


id: GO:0003941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine = pyruvate + NH3.","definition_xrefs":["EC:4.3.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"L-serine ammonia-lyase activity","secondary_identifiers":["MetaCyc:4.3.1.17-RXN","RHEA:19169"],"synonyms":[{"name":"L-hydroxyaminoacid dehydratase activity","type":"broad"},{"name":"L-serine ammonia-lyase (pyruvate-forming) activity","type":"related"},{"name":"L-serine deaminase activity","type":"exact"},{"name":"L-serine dehydratase activity","type":"broad"},{"name":"L-serine dehydration activity","type":"related"},{"name":"L-serine hydro-lyase (deaminating) activity","type":"exact"},{"name":"serine deaminase activity","type":"broad"}],"termid":"GO:0003941"}


id: PBO:0087610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the COMPASS (Set1C) complex; COMPASS methylates lysine 4 of histone H3 and is required in chromatin silencing at telomeres; contains a Dpy-30 domain that mediates interaction with Bre2p; similar to C. elegans and human DPY-30","termid":"PBO:0087610"}


id: PBO:0072610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L24 domain containing 1 pseudogene 5","termid":"PBO:0072610"}


id: MONDO:0009356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive form of humeroradial synostosis (disease).","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"humeroradial synostosis","termid":"MONDO:0007737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005497"],"is_obsolete":false,"name":"autosomal recessive humeroradial synostosis","secondary_identifiers":["MEDGEN:343467","OMIM:236400","UMLS:C1856055"],"synonyms":[{"name":"autosomal recessive humeroradial synostosis (disease)","type":"exact"},{"name":"humeroradial synostosis","type":"related"},{"name":"humeroradial synostosis (disease), autosomal recessive","type":"exact"},{"name":"humeroradial/multiple synostosis syndrome","type":"related"}],"termid":"MONDO:0009356","xrefs":{"Monarch":{"xref_id":"0009356"}}}


id: PBO:0040556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9","termid":"PBO:0040556"}


id: GO:0033807
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: stearoyl-CoA + malonyl-CoA + 2 NAD(P)H + 2 H+ = icosanoyl-CoA + CO2 + 2 NAD(P)+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete icosanoyl-CoA synthase activity (obsolete GO:0033807)","synonyms":[{"name":"C18-CoA elongase activity","type":"related"},{"name":"acyl-CoA elongase activity","type":"related"},{"name":"stearoyl-CoA elongase activity","type":"related"},{"name":"stearoyl-CoA:malonyl-CoA C-acyltransferase (decarboxylating, oxoacyl- and enoyl-reducing) activity","type":"related"}],"termid":"GO:0033807"}


id: MONDO:0002100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the cardiovascular system.","definition_xrefs":["NCIT:C114940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"cardiovascular neoplasm","termid":"MONDO:0024757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cardiovascular cancer","secondary_identifiers":["DOID:176","UMLS:C3898472","MEDGEN:858066"],"synonyms":[{"name":"cancer of cardiovascular system","type":"exact"},{"name":"cardiovascular neoplasm","type":"broad"},{"name":"cardiovascular system cancer","type":"exact"},{"name":"cardiovascular tumors","type":"exact"},{"name":"cardiovascular tumours","type":"exact"},{"name":"malignant cardiovascular neoplasm","type":"exact"},{"name":"malignant cardiovascular system neoplasm","type":"exact"},{"name":"malignant neoplasm of cardiovascular system","type":"exact"}],"termid":"MONDO:0002100","xrefs":{"Monarch":{"xref_id":"0002100"}}}


id: PBO:0038980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylserine hydrolase","termid":"PBO:0038980"}


id: GO:0060108
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The extracellular matrix part that is a regularly spaced indentation in the outer cortical layer of the cuticle. The pattern of annular furrows corresponds to sites of invaginations in hypodermal cell membranes that, in turn, correspond to submembranous regions where actin microfilament bundles assemble early in lethargus, the first phase of the molting cycle in which activity and feeding decline.","definition_xrefs":["ISSN:15518507","GOC:kmv","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cortical layer of collagen and cuticulin-based cuticle extracellular matrix","termid":"GO:0060106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"annular furrow extracellular matrix","termid":"GO:0060108"}


id: MONDO:0007462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple sclerosis, susceptibility to","secondary_identifiers":["MEDGEN:358269","OMIMPS:126200","UMLS:C1868685"],"synonyms":[{"name":"MS","type":"related"},{"name":"disseminated sclerosis","type":"related"}],"termid":"MONDO:0007462","xrefs":{"Monarch":{"xref_id":"0007462"}}}


id: FYPO:0002787
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which vacuoles are smaller than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar morphology","termid":"FYPO:0002257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"small vacuoles","synonyms":[{"name":"decreased vacuole size","type":"exact"},{"name":"reduced vacuole size","type":"exact"}],"termid":"FYPO:0002787"}


id: GO:0090316
data:
  {"annotated_genes":["SJAG_03453","SJAG_01805","SJAG_03048","SJAG_02592","SJAG_04312","SJAG_01245","SJAG_04464"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93289,99937,101350,110501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[93857,90331,101887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of proteins within cells.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"is_a","term_name":"positive regulation of protein transport","termid":"GO:0051222"},{"relation_name":"positively_regulates","term_name":"intracellular protein transport","termid":"GO:0006886"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01245":null,"SJAG_01805":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_04312":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of intracellular protein transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090316","terms_by_termid":{"GO:0042307":null,"GO:0046827":null}}


id: PR:G2TRN1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1071.13 gene.","definition_xrefs":["UniProtKB:G2TRN1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1071.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1071.13","synonyms":[{"name":"Spom972h-SPAC1071.13","type":"exact"}],"termid":"PR:G2TRN1"}


id: PBO:0085920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; identical to Pau1p","termid":"PBO:0085920"}


id: GO:0003910
data:
  {"annotated_genes":["SJAG_00198","SJAG_02527"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92046,113389],"is_not":false,"summary":null,"term":"GO:0003910"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + deoxyribonucleotide(n) + deoxyribonucleotide(m) = AMP + diphosphate + deoxyribonucleotide(n+m).","definition_xrefs":["EC:6.5.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA ligase activity","termid":"GO:0003909"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00198":null,"SJAG_02527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0140097","GO:0003824"],"is_obsolete":false,"name":"DNA ligase (ATP) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:DNA-LIGASE-ATP-RXN","Reactome:R-HSA-9914903"],"synonyms":[{"name":"DNA joinase activity","type":"broad"},{"name":"DNA repair enzyme activity","type":"related"},{"name":"DNA-joining enzyme","type":"related"},{"name":"deoxyribonucleate ligase","type":"broad"},{"name":"deoxyribonucleic acid joinase","type":"broad"},{"name":"deoxyribonucleic acid ligase","type":"broad"},{"name":"deoxyribonucleic acid repair enzyme","type":"related"},{"name":"deoxyribonucleic acid-joining enzyme","type":"related"},{"name":"deoxyribonucleic joinase","type":"broad"},{"name":"deoxyribonucleic ligase","type":"broad"},{"name":"deoxyribonucleic repair enzyme","type":"related"},{"name":"deoxyribonucleic-joining enzyme","type":"related"},{"name":"poly(deoxyribonucleotide):poly(deoxyribonucleotide) ligase (AMP-forming)","type":"related"},{"name":"polydeoxyribonucleotide synthase (ATP) activity","type":"related"},{"name":"polynucleotide ligase","type":"broad"},{"name":"polynucleotide ligase (ATP) activity","type":"related"},{"name":"sealase activity","type":"related"}],"termid":"GO:0003910","terms_by_termid":{"GO:0003910":null}}


id: PBO:0063354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"procollagen C-endopeptidase enhancer 2","termid":"PBO:0063354"}


id: PBO:0044647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dopachrome tautomerase","termid":"PBO:0044647"}


id: PR:O94326
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pir2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein C725.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.08","synonyms":[{"name":"Spom972h-pir2","type":"exact"}],"termid":"PR:O94326"}


id: MOD:00148
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts three L-cysteine residues and a three-iron four-sulfur cluster to tris-L-cysteinyl triiron tetrasulfide.","definition_xrefs":["PubMed:9063899","RESID:AA0139","PubMed:6848518","PubMed:2056535","PubMed:7819255","PubMed:10555576","PubMed:3422475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"tris-L-cysteinyl triiron tetrasulfide","synonyms":[{"name":"METAL Iron-sulfur (3Fe-4S)","type":"exact"},{"name":"mu3-sulfido tri-mu-sulfido tris-S-L-cysteinyl triiron","type":"exact"},{"name":"mu3-sulfido-tri-mu-sulfido-triscysteinato-1kappaS,2kappaS,3kappaS-triiron","type":"exact"},{"name":"tris-L-cysteinyl triiron tetrasulfide","type":"exact"},{"name":"tris-L-cysteinyl triiron tetrasulfide C3 cluster","type":"exact"},{"name":"tris-L-cysteinyl triiron tetrasulfide cubane form","type":"exact"},{"name":"tris-L-cysteinyl triiron tetrasulfide cuboid cluster","type":"exact"},{"name":"tris-L-cysteinyl triiron tetrasulfide trigonal cluster","type":"exact"}],"termid":"MOD:00148"}


id: GO:0103074
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD + D-glucopyranose 6-phosphate = NADH + H+ + 3-dehydro-D-glucose 6-phosphate.","definition_xrefs":["GOC:pz","RHEA:37547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"glucose-6-phosphate 3-dehydrogenase activity","secondary_identifiers":["EC:1.1.1.361","MetaCyc:RXN8J2-136"],"termid":"GO:0103074"}


id: SO:0001118
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The pi helix has 4.1 residues per turn and a translation of 1.15 (=0.115 nm) along the helical axis. The N-H group of an amino acid forms a hydrogen bond with the C=O group of the amino acid five residues earlier.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"right_handed_peptide_helix","termid":"SO:0001116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"pi_helix","secondary_identifiers":["BS:00153","http://en.wikipedia.org/wiki/Pi_helix"],"synonyms":[{"name":"pi helix","type":"exact"}],"termid":"SO:0001118"}


id: GO:0060065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reproductive developmental process whose specific outcome is the progression of the uterus over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uterus development","synonyms":[{"name":"Mullerian tract development","type":"related"}],"termid":"GO:0060065"}


id: GO:0043027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a cysteine-type endopeptidase involved in the apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:jl","Wikipedia:Caspase","PMID:14744432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type endopeptidase regulator activity involved in apoptotic process","termid":"GO:0043028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"cysteine-type endopeptidase inhibitor activity involved in apoptotic process","synonyms":[{"name":"caspase inhibitor activity","type":"broad"}],"termid":"GO:0043027"}


id: MONDO:0020675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease of the large or small intestine that is caused by inadequate blood supply.","definition_xrefs":["NCIT:C35212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"is_a","term_name":"ischemic disease","termid":"MONDO:0005053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"ischemic bowel disorder","secondary_identifiers":["UMLS:C2004435","MEDGEN:412148"],"synonyms":[{"name":"ischaemic bowel disease","type":"exact"},{"name":"ischemic bowel disease","type":"exact"}],"termid":"MONDO:0020675","xrefs":{"Monarch":{"xref_id":"0020675"}}}


id: MONDO:0019783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neovascular glaucoma is the most common type of secondary glaucoma, usually caused by diabetic retinopathy, central retinal vein occlusion and carotid artery obstruction but sometimes by trauma, uvietis or ocular tumors, and characterized by severe eye pain, synechial angle glaucoma, high intraocular pressure and leading to loss of vision.","definition_xrefs":["Orphanet:94058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glaucoma","termid":"MONDO:0005041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"neovascular glaucoma","secondary_identifiers":["icd11.foundation:700864997","SCTID:232086000","EFO:1001060","MEDGEN:4898","MESH:D015355","DOID:1687","UMLS:C0017609","MedDRA:10062891","GARD:19245"],"synonyms":[{"name":"secondary angle-closure glaucoma with rubeosis","type":"exact"}],"termid":"MONDO:0019783","xrefs":{"Monarch":{"xref_id":"0019783"}}}


id: GO:0021897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of an astrocyte that resides in the forebrain, from initial commitment of the cell to its fate, to the fully functional differentiated cell. An astrocyte is the most abundant type of glial cell. Astrocytes provide support for neurons and regulate the environment in which they function.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astrocyte development","termid":"GO:0014002"},{"relation_name":"part_of","term_name":"forebrain astrocyte differentiation","termid":"GO:0021896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain astrocyte development","termid":"GO:0021897"}


id: MONDO:0011735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of Hyper IgM syndrome characterized by mutations of the CD40 gene. In this type, Immature B cells cannot receive signal 2 from helper T cells which is necessary to mature into mature B cells.","definition_xrefs":["Wikipedia:Hyper-IgM_syndrome_type_3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyper-IgM syndrome","termid":"MONDO:0003947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"hyper-IgM syndrome type 3","secondary_identifiers":["OMIM:606843","Orphanet:101090","MEDGEN:328419","UMLS:C1720957","GARD:10579","DOID:0060023"],"synonyms":[{"name":"CD40 deficiency","type":"related"},{"name":"CD40 hyper-IgM syndrome","type":"exact"},{"name":"HIGM3","type":"exact"},{"name":"hyper IgM syndrome 3","type":"related"},{"name":"hyper-IgM syndrome 3","type":"related"},{"name":"hyper-IgM syndrome caused by mutation in CD40","type":"exact"},{"name":"hyper-IgM syndrome due to CD40 deficiency","type":"exact"},{"name":"immunodeficiency with hyper IgM type 3","type":"related"},{"name":"immunodeficiency with hyper-IgM type 3","type":"exact"},{"name":"immunodeficiency with hyper-IgM, type 3","type":"related"},{"name":"type 3 hyper-IgM immunodeficiency","type":"exact"}],"termid":"MONDO:0011735","xrefs":{"Monarch":{"xref_id":"0011735"}}}


id: GO:0032926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of any activin receptor signaling pathway.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of activin receptor signaling pathway","termid":"GO:0032925"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090101"},{"relation_name":"negatively_regulates","term_name":"activin receptor signaling pathway","termid":"GO:0032924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of activin receptor signaling pathway","synonyms":[{"name":"down regulation of activin receptor signaling pathway","type":"exact"},{"name":"down-regulation of activin receptor signaling pathway","type":"exact"},{"name":"downregulation of activin receptor signaling pathway","type":"exact"},{"name":"inhibition of activin receptor signaling pathway","type":"narrow"},{"name":"negative regulation of activin receptor signalling pathway","type":"exact"},{"name":"negative regulation of activin signaling pathway","type":"related"},{"name":"negative regulation of activin signalling pathway","type":"related"}],"termid":"GO:0032926"}


id: PBO:0047909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(9)(p21)","termid":"PBO:0047909"}


id: MONDO:1010822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Split hand that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"split hand, non-human animal","termid":"MONDO:1010159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"split hand, domestic cat","secondary_identifiers":["OMIA:000942-9685"],"termid":"MONDO:1010822","xrefs":{"Monarch":{"xref_id":"1010822"}}}


id: MONDO:0004479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor that occurs during childhood.","definition_xrefs":["NCIT:C6541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood germ cell tumor","termid":"MONDO:0003751"},{"relation_name":"is_a","term_name":"malignant germ cell tumor","termid":"MONDO:0006290"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant childhood germ cell neoplasm","secondary_identifiers":["UMLS:C1334574","MEDGEN:233150","DOID:8149"],"synonyms":[{"name":"malignant childhood germ cell neoplasm","type":"exact"},{"name":"malignant childhood germ cell tumor","type":"related"},{"name":"malignant childhood germ cell tumour","type":"related"},{"name":"malignant paediatric germ cell neoplasm","type":"related"},{"name":"malignant paediatric germ cell tumour","type":"exact"},{"name":"malignant pediatric germ cell neoplasm","type":"related"},{"name":"malignant pediatric germ cell tumor","type":"exact"}],"termid":"MONDO:0004479","xrefs":{"Monarch":{"xref_id":"0004479"}}}


id: FYECO:0000293
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A sequential growth condition in which cells are first grown at a low temperature followed by growth at standard temperature.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temperature shift, low to high","termid":"FYECO:0000293"}


id: PBO:0050775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histatin 3","termid":"PBO:0050775"}


id: MOD:02054
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-proline residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-proline residue","synonyms":[{"name":"XlnkPro","type":"exact"}],"termid":"MOD:02054"}


id: MOD:00567
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because Unimod entry 244 is redundant with Unimod 348. Remap to MOD:00775.","definition_xrefs":["PubMed:15736973","PubMed:5681232","PubMed:6692818","RESID:AA0003","PubMed:9789001","Unimod:244","ChEBI:29956"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00567 histidine oxidation to asparagine (obsolete MOD:00567)","termid":"MOD:00567"}


id: FYPO:0007354
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is normal (i.e. indistinguishable from wild type) at a cis-acting homologous chromosome pairing region on chromosome 3.","definition_xrefs":["PomBase:vw","PomBase:mah","PMID:31811152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal homologous chromosome pairing at cis-acting homologous chromosome pairing region on chromosome 3","synonyms":[{"name":"normal homologous chromosome pairing at RNA584 locus","type":"narrow"},{"name":"normal homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region on chromosome 3","type":"exact"},{"name":"normal synapsis at cis-acting homologous chromosome pairing region on chromosome 3","type":"exact"}],"termid":"FYPO:0007354"}


id: MONDO:0001799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"scleral disorder","termid":"MONDO:0001269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"localized anterior staphyloma","secondary_identifiers":["DOID:13787","ICD9:379.14","MEDGEN:509936","SCTID:21946002","UMLS:C0155362"],"synonyms":[{"name":"anterior staphyloma, localised","type":"exact"},{"name":"anterior staphyloma, localized","type":"exact"}],"termid":"MONDO:0001799","xrefs":{"Monarch":{"xref_id":"0001799"}}}


id: PBO:0038789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase domain containing 1","termid":"PBO:0038789"}


id: MONDO:0002584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syringomyelia (obsolete MONDO:0002584)","termid":"MONDO:0002584","xrefs":{"Monarch":{"xref_id":"0002584"}}}


id: SO:0000723
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic sequence removed from the genome, as a normal event, by a process of recombination.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recombination_feature","termid":"SO:0000298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iDNA","synonyms":[{"name":"INSDC_feature:iDNA","type":"exact"},{"name":"intervening DNA","type":"exact"}],"termid":"SO:0000723"}


id: PBO:0039044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL4 intronic transcript 1","termid":"PBO:0039044"}


id: MONDO:0013567
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85454,85455],"is_not":false,"summary":null,"term":"MONDO:0013567"}]},"cv_name":"mondo","definition":"Any atrial heart septal defect in which the cause of the disease is a mutation in the MYH6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septal defect","termid":"MONDO:0006664"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial septal defect 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15755","OMIM:614089","DOID:0110108","UMLS:C3279790","MEDGEN:481420","MESH:C563540"],"synonyms":[{"name":"ASD3","type":"exact"},{"name":"MYH6 atrial heart septal defect","type":"exact"},{"name":"atrial heart septal defect caused by mutation in MYH6","type":"exact"},{"name":"atrial heart septal defect type 3","type":"exact"},{"name":"atrial septal defect 3","type":"exact"},{"name":"atrial septal defect type 3","type":"exact"}],"termid":"MONDO:0013567","terms_by_termid":{"MONDO:0013567":null},"xrefs":{"Monarch":{"xref_id":"0013567"}}}


id: MONDO:0011008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft lip/palate - intestinal malrotation - cardiopathy is a multiple congenital anomaly syndrome described in 5 patients to date, characterized by flat face, hypertelorism, flat occiput, upward slanting palpebral fissures, cleft palate, micrognathia, short neck, and severe congenital heart defects which were lethal in 3 of the 5 patients reported. Malrotation of the intestine, bilateral clinodactyly, bilobed tongue, short fourth metatarsals and bifid thumbs were reported in individual cases. There have been no further descriptions in the literature since 1997.","definition_xrefs":["Orphanet:2001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft lip/palate-intestinal malrotation-cardiopathy syndrome","secondary_identifiers":["UMLS:C2931750","MEDGEN:444135","SCTID:719456001","MESH:C538160","OMIM:601165","GARD:3430"],"synonyms":[{"name":"McPherson Clemens syndrome","type":"related"},{"name":"McPherson-Clemens syndrome","type":"exact"},{"name":"cleft LIP/palate with characteristic facies, intestinal malrotation, and lethal congenital heart disease","type":"related"},{"name":"cleft lip, cleft palate, characteristic facies, intestinal malrotation, and lethal congenital heart disease","type":"related"}],"termid":"MONDO:0011008","xrefs":{"Monarch":{"xref_id":"0011008"}}}


id: PBO:0047040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 106 member A","termid":"PBO:0047040"}


id: PBO:0011076
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defect in REplication","termid":"PBO:0011076"}


id: PBO:0089411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase, human DHX29 ortholog","termid":"PBO:0089411"}


id: PBO:0068286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H2 subunit C","termid":"PBO:0068286"}


id: PBO:0085762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase of the PAK/Ste20 family, required for cell integrity; physically interacts with Cdc31p (centrin), which is a component of the spindle pole body; phosphorylates Cbk1p kinase after allosteric activation by Hym1p; part of the RAM network that regulates cellular polarity and morphogenesis","termid":"PBO:0085762"}


id: PBO:0030607
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_calcium_starvation","termid":"PBO:0030607"}


id: PBO:0067297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 382, pseudogene","termid":"PBO:0067297"}


id: PBO:0091759
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.2108180_2108181insA","termid":"PBO:0091759"}


id: GO:0019000
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["PMID:12444964","PMID:12928502","PMID:12941691"],"gene_count":0,"genotype_count":0,"name":"obsolete endonuclease G activity (obsolete GO:0019000)","synonyms":[{"name":"endonuclease G activity","type":"exact"}],"termid":"GO:0019000"}


id: PBO:0059767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 41","termid":"PBO:0059767"}


id: PBO:0052498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 10","termid":"PBO:0052498"}


id: PBO:0063207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCBP2 pseudogene 3","termid":"PBO:0063207"}


id: GO:0003784
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete barbed-end actin capping/severing activity (obsolete GO:0003784)","synonyms":[{"name":"barbed-end actin capping/severing activity","type":"exact"}],"termid":"GO:0003784"}


id: PBO:0033797
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-progressively_decreasing_vegetative_cell_population_growth_rate_followed_by_return_to_normal_growth_rate","termid":"PBO:0033797"}


id: GO:0140363
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein granule located in the cytoplasm that is formed by the RNA-binding protein TIS11B and RNA molecules, enriched in membrane protein-encoding mRNAs with multiple AU-rich elements. TIS granules are reticular meshworks intertwined with the endoplasmic reticulum (ER).","definition_xrefs":["PMID:30479375","Wikipedia:TIGER_domain","PMID:30449617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ribonucleoprotein granule","termid":"GO:0036464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"TIS granule","termid":"GO:0140363"}


id: PBO:0068725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 14, pseudogene","termid":"PBO:0068725"}


id: PBO:0089022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shelterin complex subunit Tpz1","termid":"PBO:0089022"}


id: GO:0035220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Progression of the wing disc over time, from its initial formation through to its metamorphosis to form adult structures including the wing hinge, wing blade and pleura.","definition_xrefs":["ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc development","termid":"GO:0007444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wing disc development","termid":"GO:0035220"}


id: PBO:0056784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microfibril associated protein 1 pseudogene 1","termid":"PBO:0056784"}


id: MONDO:0008786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sideroblastic anemia","termid":"MONDO:0015194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"pyridoxine-responsive sideroblastic anemia","secondary_identifiers":["MEDGEN:395346","MESH:C565954","UMLS:C1859787","DOID:0060066","SCTID:191260004","OMIM:206000"],"synonyms":[{"name":"B6-responsive sideroblastic anaemia","type":"related"},{"name":"B6-responsive sideroblastic anemia","type":"related"},{"name":"anaemia congenital sideroblastic B6-responsive","type":"related"},{"name":"anemia congenital sideroblastic B6-responsive","type":"related"},{"name":"anemia, congenital sideroblastic, B6-responsive","type":"related"},{"name":"anemia, sideroblastic, pyridoxine-responsive, autosomal recessive","type":"related"},{"name":"sideroblastic anaemia pyridoxine-responsive autosomal recessive","type":"related"},{"name":"sideroblastic anemia pyridoxine-responsive autosomal recessive","type":"related"}],"termid":"MONDO:0008786","xrefs":{"Monarch":{"xref_id":"0008786"}}}


id: MONDO:0015589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disorder characterized by degenerative changes in the limbic area of the brain. Causes include infections and autoimmune conditions; it may also manifest as a paraneoplastic syndrome, most often caused by small cell lung carcinoma. Signs and symptoms include behavioral changes, hallucinations and dementia.","definition_xrefs":["NCIT:C4350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"limbic encephalitis","termid":"MONDO:0015588"},{"relation_name":"is_a","term_name":"paraneoplastic neurologic syndrome","termid":"MONDO:0018215"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraneoplastic limbic encephalitis","secondary_identifiers":["SCTID:445014002","Orphanet:163895","icd11.foundation:1147819644","ICD9:323.81"],"synonyms":[{"name":"limbic encephalitis","type":"broad"}],"termid":"MONDO:0015589","xrefs":{"Monarch":{"xref_id":"0015589"}}}


id: FYPO:0002773
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell undergoes an abnormal nuclear division after meiosis II is complete.","definition_xrefs":["PMID:23628763","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis","termid":"FYPO:0000051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"third meiotic division","synonyms":[{"name":"meiosis III","type":"related"},{"name":"meiosis termination defect","type":"exact"},{"name":"third meiotic nuclear division","type":"exact"}],"termid":"FYPO:0002773"}


id: PBO:0090554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase complex subunit","termid":"PBO:0090554"}


id: PBO:0076409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 5 like","termid":"PBO:0076409"}


id: FYPO:0002051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is swollen, elongated, has no septum, and contains more than one nucleus. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen elongated cell","termid":"FYPO:0001429"},{"relation_name":"is_a","term_name":"elongated multinucleate aseptate vegetative cell","termid":"FYPO:0002049"},{"relation_name":"is_a","term_name":"swollen multinucleate vegetative cell","termid":"FYPO:0004257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000032","FYPO:0000631","FYPO:0005447","FYPO:0000005"],"is_obsolete":false,"name":"swollen elongated multinucleate aseptate vegetative cell","synonyms":[{"name":"elongated multinucleate aseptate vegetative cell with increased cell volume","type":"exact"},{"name":"enlarged elongated multinucleate aseptate vegetative cell","type":"related"},{"name":"large elongated multinucleate aseptate vegetative cell","type":"related"},{"name":"swollen elongated multinucleate aseptate cell during vegetative growth","type":"exact"},{"name":"swollen elongated multinucleate aseptate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002051"}


id: MONDO:0005970
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pneumonia caused by infections with bacteria of the genus staphylococcus, usually with staphylococcus aureus.","definition_xrefs":["MESH:D011023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial pneumonia","termid":"MONDO:0004652"},{"relation_name":"is_a","term_name":"staphylococcal infection","termid":"MONDO:0024313"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staphylococcal pneumonia","secondary_identifiers":["EFO:0007496","ICD9:482.49","MEDGEN:18532","UMLS:C0032308","ICD9:482.40","ICD9:482.4","SCTID:22754005"],"synonyms":[{"name":"Staphylococcus caused pneumonia","type":"exact"},{"name":"Staphylococcus pneumonia","type":"exact"}],"termid":"MONDO:0005970","xrefs":{"Monarch":{"xref_id":"0005970"}}}


id: PBO:0069818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1104, pseudogene","termid":"PBO:0069818"}


id: PBO:0012525
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_results_in_division_of","termid":"PBO:0012525"}


id: PBO:0073566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Src homology 2 domain containing F","termid":"PBO:0073566"}


id: PBO:0017504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium ion transmembrane transporter Trk2","termid":"PBO:0017504"}


id: MONDO:0007670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypotrichosis - lymphedema - telangiectasia is an extremely rare syndromic lymphedema disorder characterized by early-onset hypotrichosis, childhood-onset lymphedema, and variable telangiectasia, particularly of the palms.","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"primary lymphedema","termid":"MONDO:0019175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"hypotrichosis-lymphedema-telangiectasia syndrome (grouping)","secondary_identifiers":["GARD:12827","Orphanet:69735"],"synonyms":[{"name":"hypotrichosis lymphedema telangiectasia syndrome","type":"related"}],"termid":"MONDO:0007670","xrefs":{"Monarch":{"xref_id":"0007670"}}}


id: PBO:0042052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 112","termid":"PBO:0042052"}


id: PBO:0059803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 29","termid":"PBO:0059803"}


id: PBO:0064375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase, mitochondrial processing subunit beta","termid":"PBO:0064375"}


id: PBO:0017854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC transmembrane transporter Abc3, unknown specificity","termid":"PBO:0017854"}


id: PR:O74465
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hrr1 gene.","definition_xrefs":["UniProtKB:O74465","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helicase required for RNAi-mediated heterochromatin assembly 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.03","synonyms":[{"name":"Spom972h-hrr1","type":"exact"}],"termid":"PR:O74465"}


id: GO:0098505
data:
  {"annotated_genes":["SJAG_02194"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94576],"is_not":false,"summary":null,"term":"GO:0098505"}]},"cv_name":"molecular_function","definition":"Binding to G-rich, single-stranded, telomere-associated DNA.","definition_xrefs":["PMID:11349150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-stranded telomeric DNA binding","termid":"GO:0043047"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"G-rich strand telomeric DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0098505","terms_by_termid":{"GO:0098505":null}}


id: PBO:0003288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Rrp14-C (predicted)","termid":"PBO:0003288"}


id: FYPO:0007363
data:
  {"alleles_by_uniquename":{"SJAG_02796:allele-1":{"allele_type":"amino_acid_mutation","description":"A343T","gene_uniquename":"SJAG_02796","name":"pyk1-A343T","uniquename":"SJAG_02796:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118686],"is_not":false,"summary":null,"term":"FYPO:0007363"}]},"cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of pyruvate kinase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02796":null},"genotype_count":1,"genotypes_by_uniquename":{"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pyk1-A343T(aa)","display_uniquename":"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02796:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000002","FYPO:0000661","FYPO:0005447","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abnormal pyruvate kinase activity","references_by_uniquename":{"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_02796"],"single_locus_genotype_uniquenames":["pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type"],"termid":"FYPO:0007363","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYPO:0007363":null,"FYPO_EXT:0000002":null}}


id: GO:0061882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of mitochondria along microtubules in axons away from the cell body and towards the presynapse.","definition_xrefs":["PMID:24302729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of anterograde axonal transport of mitochondrion","termid":"GO:0061880"},{"relation_name":"negatively_regulates","term_name":"anterograde axonal transport of mitochondrion","termid":"GO:0098957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of anterograde axonal transport of mitochondrion","synonyms":[{"name":"negative regulation of anterograde axon transport of mitochondria","type":"exact"}],"termid":"GO:0061882"}


id: GO:2000975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pro-B cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lymphoid progenitor cell differentiation","termid":"GO:1905458"},{"relation_name":"is_a","term_name":"regulation of pro-B cell differentiation","termid":"GO:2000973"},{"relation_name":"positively_regulates","term_name":"pro-B cell differentiation","termid":"GO:0002328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pro-B cell differentiation","synonyms":[{"name":"positive regulation of pro-B cell development","type":"related"},{"name":"positive regulation of pro-B lymphocyte differentiation","type":"exact"}],"termid":"GO:2000975"}


id: PBO:0063096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"par-3 family cell polarity regulator beta","termid":"PBO:0063096"}


id: MONDO:1010932
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An early onset syndrome of impaired neuromuscular transmission associated with an acetylcholinesterase deficiency in dogs due to a variation in the COLQ gene.","definition_xrefs":["PMID:32668077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"congenital neuromuscular disease, non-human animal","termid":"MONDO:1011851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital myasthenic syndrome, COLQ-related, dog","secondary_identifiers":["OMIA:001928-9615"],"termid":"MONDO:1010932","xrefs":{"Monarch":{"xref_id":"1010932"}}}


id: PBO:0076261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small VCP interacting protein","termid":"PBO:0076261"}


id: PBO:0075826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal sequence receptor subunit 1 pseudogene 2","termid":"PBO:0075826"}


id: MOD:00047
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-phospho-L-threonine.","definition_xrefs":["ChEBI:21967","DeltaMass:0","OMSSA:7","RESID:AA0038","Unimod:21#T","PubMed:7678926","PubMed:12923550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 181.00-181.02 Da","termid":"MOD:00773"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"},{"relation_name":"is_a","term_name":"O-phosphorylated residue","termid":"MOD:01455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"O-phospho-L-threonine","synonyms":[{"name":"(2S,3R)-2-amino-3-(phosphonooxy)butanoic acid","type":"exact"},{"name":"2-amino-3-hydroxybutanoic acid 3-phosphate","type":"exact"},{"name":"2-azanyl-3-(phosphonooxy)butanoic acid","type":"exact"},{"name":"MOD_RES Phosphothreonine","type":"exact"},{"name":"O-phospho-L-threonine","type":"exact"},{"name":"O-phosphorylated L-threonine","type":"exact"},{"name":"O3-phosphothreonine","type":"exact"},{"name":"OPThr","type":"exact"},{"name":"Phospho","type":"related"},{"name":"Phospho Threonyl","type":"exact"},{"name":"Phosphorylation","type":"related"},{"name":"phosphorylationt","type":"exact"},{"name":"threonine phosphate ester","type":"exact"}],"termid":"MOD:00047"}


id: PBO:0078641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase RNA component interacting RNase","termid":"PBO:0078641"}


id: PBO:0074737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 95","termid":"PBO:0074737"}


id: PBO:0056614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYST/Esa1 associated factor 6","termid":"PBO:0056614"}


id: GO:0008377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the detection of light triggers the release of internally sequestered calcium ions.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete light-induced release of internally sequestered calcium ion (obsolete GO:0008377)","synonyms":[{"name":"light-induced release of calcium from internal store","type":"exact"},{"name":"light-induced release of internally sequestered calcium ion (Ca2+)","type":"exact"},{"name":"light-induced release of internally stored calcium ion (Ca2+)","type":"exact"}],"termid":"GO:0008377"}


id: GO:0051407
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glycerone phosphate(out) + phosphate(in) = glycerone phosphate(in) + phosphate(out).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"organophosphate:phosphate antiporter activity","termid":"GO:0015315"},{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"glycerone phosphate:phosphate antiporter activity","synonyms":[{"name":"dihydroxyacetone-phosphate:inorganic phosphate antiporter activity","type":"exact"},{"name":"glycerone phosphate:inorganic phosphate antiporter activity","type":"exact"}],"termid":"GO:0051407"}


id: PBO:0113273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIK-related protein kinase and rapamycin target; subunit of TORC1, a complex that regulates growth in response to nutrients and TORC2, a complex that regulates plasma membrane (PM) homeostasis and cell-cycle dependent polarization of the actin cytoskeleton; involved in meiosis; PM retention is dependent on Avo3p; malonyl-CoA is a direct ATP-competitive inhibitor of TORC1; TOR2 has a paralog, TOR1, that arose from the whole genome duplication","termid":"PBO:0113273"}


id: PBO:0060411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 38, NatC auxiliary subunit","termid":"PBO:0060411"}


id: PBO:0053500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 482","termid":"PBO:0053500"}


id: PBO:0062406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 31 pseudogene","termid":"PBO:0062406"}


id: FYPO:0002782
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a greater extent than normal during a cellular response to a salt stress. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000294","FYPO:0001320","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased transcription during cellular response to salt stress","synonyms":[{"name":"increased transcription during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"increased transcription during cellular response to salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0002782"}


id: PBO:0002757
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.2.9","termid":"PBO:0002757"}


id: PBO:0083744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the outer kinetochore MIND complex; joins kinetochore subunits contacting DNA to those contacting microtubules; required for kinetochore bi-orientation and accurate chromosome segregation; complex consists of Mtw1p, Nnf1p, Nsl1p and Dsn1p; homologous to metazoan CENP-H proteins","termid":"PBO:0083744"}


id: PATO:0002033
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A reflective quality that is the light scattering occurring at wide angle (around 90 degrees) to the incident beam.","definition_xrefs":["PATOC:mc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation reflective quality","termid":"PATO:0001294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"side scatter","termid":"PATO:0002033"}


id: FYPO:0002348
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which stress granule assembly does not occur.","definition_xrefs":["PMID:21098141","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal stress granule assembly during vegetative growth","termid":"FYPO:0002347"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished stress granule assembly during vegetative growth","synonyms":[{"name":"abolished cytoplasmic stress granule assembly during vegetative growth","type":"exact"},{"name":"abolished stress granule assembly during mitotic cell cycle","type":"related"},{"name":"abolished stress granule formation during vegetative growth","type":"exact"}],"termid":"FYPO:0002348"}


id: MOD:00462
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to L-kynurenine.","definition_xrefs":["OMSSA:66","PubMed:11029593","PubMed:9252331","DeltaMass:357","Unimod:351#W"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-kynurenine","synonyms":[{"name":"(2S)-2-amino-4-(2-aminophenyl)-4-oxo-butanoic acid","type":"exact"},{"name":"Trp->Kynurenin","type":"related"},{"name":"kynureninw","type":"exact"},{"name":"tryptophan oxidation to kynurenin","type":"related"}],"termid":"MOD:00462"}


id: GO:0060860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of floral organ abscission, the controlled shedding of floral organs.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"floral organ abscission","termid":"GO:0010227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of floral organ abscission","termid":"GO:0060860"}


id: GO:1900095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of dosage compensation, by inactivation of X chromosome.","definition_xrefs":["Wikipedia:XY_sex-determination_system","GOC:TermGenie","GOC:mr","PMID:20622855"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of dosage compensation by inactivation of X chromosome (obsolete GO:1900095)","synonyms":[{"name":"regulation of Barr body formation","type":"related"},{"name":"regulation of X chromosome inactivation","type":"exact"},{"name":"regulation of chromosome inactivation","type":"broad"}],"termid":"GO:1900095"}


id: PBO:0040295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3","termid":"PBO:0040295"}


id: FYPO:0009060
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of wortmannin than normal.","definition_xrefs":["PMID:26891792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0002682","FYPO:0005447"],"is_obsolete":false,"name":"resistance to wortmannin","synonyms":[{"name":"resistance to wortmannin during vegetative growth","type":"exact"},{"name":"resistant to wortmannin","type":"exact"}],"termid":"FYPO:0009060"}


id: MONDO:0020744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by an electrocardiographic finding of intermittent failure of atrial electrical impulse conduction to the ventricles, characterized by a progressively lengthening PR interval prior to the block of an atrial impulse. (CDISC)","definition_xrefs":["NCIT:C62017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"second-degree atrioventricular block","termid":"MONDO:0000467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Mobitz type I atrioventricular block","secondary_identifiers":["MEDGEN:82687","UMLS:C0264907"],"synonyms":[{"name":"AV block second degree Mobitz type I","type":"exact"},{"name":"AV block second degree Möbitz type I","type":"exact"},{"name":"Mobitz I","type":"exact"},{"name":"Mobitz type I","type":"exact"},{"name":"Mobitz type I second degree AV block","type":"exact"},{"name":"Möbitz I","type":"exact"},{"name":"Möbitz type I second degree AV block","type":"exact"},{"name":"Wenckebach block","type":"exact"},{"name":"second degree atrioventricular block Mobitz type I","type":"exact"},{"name":"second degree atrioventricular block Möbitz type I","type":"exact"},{"name":"type 1 2nd degree AV block","type":"exact"},{"name":"type 1 second degree AV block","type":"exact"},{"name":"type 1 second degree atrioventricular block","type":"exact"}],"termid":"MONDO:0020744","xrefs":{"Monarch":{"xref_id":"0020744"}}}


id: GO:0060010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the cellular identity of Sertoli cells is acquired and determined.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"epithelial cell fate commitment","termid":"GO:0072148"},{"relation_name":"part_of","term_name":"Sertoli cell differentiation","termid":"GO:0060008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Sertoli cell fate commitment","termid":"GO:0060010"}


id: PBO:0045532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deltex E3 ubiquitin ligase 3","termid":"PBO:0045532"}


id: GO:0062242
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of the two endoplasmic reticulum-derived lipid bilayer membranes that bound a double membrane vesicle viral factory.","definition_xrefs":["PMID:22440839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasmic vesicle membrane","termid":"GO:0044162"},{"relation_name":"part_of","term_name":"double membrane vesicle viral factory","termid":"GO:0039718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"double membrane vesicle viral factory membrane","synonyms":[{"name":"membrane of double membrane vesicle viral factory","type":"exact"}],"termid":"GO:0062242"}


id: MONDO:0958187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"C1Q deficiency","termid":"MONDO:0013343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"C1Q deficiency 2","secondary_identifiers":["MEDGEN:1841058","UMLS:C5830422","OMIM:620321"],"termid":"MONDO:0958187","xrefs":{"Monarch":{"xref_id":"0958187"}}}


id: MONDO:0006220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the gallbladder. It is composed entirely by malignant squamous epithelial cells.","definition_xrefs":["NCIT:C9170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gallbladder carcinoma","termid":"MONDO:0003220"},{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992","MONDO:0002515"],"is_obsolete":false,"name":"gallbladder squamous cell carcinoma","secondary_identifiers":["UMLS:C0279658","MEDGEN:83539","DOID:5535","EFO:1000267"],"synonyms":[{"name":"epidermoid carcinoma of gallbladder","type":"exact"},{"name":"epidermoid carcinoma of the gallbladder","type":"exact"},{"name":"epidermoid gallbladder carcinoma","type":"exact"},{"name":"gall bladder squamous cell carcinoma","type":"exact"},{"name":"gallbladder squamous cell cancer","type":"exact"},{"name":"gallbladder squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of gallbladder","type":"exact"},{"name":"squamous cell carcinoma of the gallbladder","type":"exact"},{"name":"squamous cell gallbladder carcinoma","type":"exact"}],"termid":"MONDO:0006220","xrefs":{"Monarch":{"xref_id":"0006220"}}}


id: PBO:0108579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASTRA complex subunit, armadillo-type fold Tti1","termid":"PBO:0108579"}


id: PBO:0046008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 1 pseudogene 3","termid":"PBO:0046008"}


id: MONDO:0002859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal tumor with skeletal muscle differentiation affecting the breast.","definition_xrefs":["NCIT:C5190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast sarcoma","termid":"MONDO:0002490"},{"relation_name":"is_a","term_name":"rhabdomyosarcoma","termid":"MONDO:0005212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast rhabdomyosarcoma","secondary_identifiers":["UMLS:C1332637","DOID:4060","MEDGEN:231970"],"synonyms":[{"name":"breast rhabdomyosarcoma","type":"exact"},{"name":"breast rhabdomyosarcoma (disease)","type":"exact"},{"name":"rhabdomyosarcoma (disease) of breast","type":"exact"},{"name":"rhabdomyosarcoma of breast","type":"exact"},{"name":"rhabdomyosarcoma of the breast","type":"exact"}],"termid":"MONDO:0002859","xrefs":{"Monarch":{"xref_id":"0002859"}}}


id: GO:0034994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a microtubule organizing center attachment site. A microtubule organizing center attachment site is a region of the nuclear envelope to which a microtubule organizing center (MTOC) attaches.","definition_xrefs":["PMID:18692466","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"part_of","term_name":"nuclear envelope organization","termid":"GO:0006998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"microtubule organizing center attachment site organization","synonyms":[{"name":"MAS organization","type":"exact"},{"name":"MTOC attachment site organization","type":"exact"},{"name":"microtubule organising centre attachment site organisation","type":"related"}],"termid":"GO:0034994"}


id: PBO:0059831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal regulatory transcription factor 1","termid":"PBO:0059831"}


id: MONDO:0020504
data:
  {"annotated_genes":["SJAG_02763"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009992"}]},"cv_name":"mondo","definition":"An inborn error of metabolism characterized by abnormal urinary excretion of myoglobin due to acute destruction of skeletal muscle fibers.","definition_xrefs":["Orphanet:99845"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete muscular lipidosis (obsolete MONDO:0016117)","termid":"MONDO:0016117"},{"relation_name":"excluded_subClassOf","term_name":"obsolete disorder of phospholipids, sphingolipids and fatty acids biosynthesis with skeletal muscle predominant involvement (obsolete MONDO:0018120)","termid":"MONDO:0018120"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02763":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hereditary recurrent myoglobinuria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16916","SCTID:716721003","ICD10CM:R82.1","MEDGEN:901659","UMLS:C4274324"],"synonyms":[{"name":"genetic recurrent myoglobinuria","type":"exact"}],"termid":"MONDO:0020504","terms_by_termid":{"MONDO:0009992":null},"xrefs":{"Monarch":{"xref_id":"0020504"}}}


id: FYPO:0003021
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ethyl N-phenylcarbamate (EPC). Cells stop growing (and may die) at a concentration of EPC that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to EPC","synonyms":[{"name":"hypersensitive to EPC","type":"exact"},{"name":"sensitive to EPC during mitotic cell cycle","type":"related"},{"name":"sensitive to EPC during vegetative growth","type":"exact"},{"name":"sensitive to ethyl N-phenylcarbamate","type":"exact"}],"termid":"FYPO:0003021"}


id: PBO:0088110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar amino acid transporter; member of a family of seven S. cerevisiae genes (AVT1-7) related to vesicular GABA-glycine transporters","termid":"PBO:0088110"}


id: PBO:0025529
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chylomicron retention disease","termid":"PBO:0025529"}


id: MONDO:0009892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chuvash erythrocytosis is a rare, genetic, congenital secondary polycythemia disorder characterized by increased hemoglobin, hematocrit and erythropoietin serum levels and normal oxygen affinity, which usually manifests with headache, dizziness, dyspnea and/or plethora. Patients present an increased risk of hemorrhage, thrombosis and early death.","definition_xrefs":["Orphanet:238557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial polycythemia","termid":"MONDO:0001115"},{"relation_name":"is_a","term_name":"congenital secondary polycythemia","termid":"MONDO:0016540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"Chuvash polycythemia","secondary_identifiers":["OMIM:263400","UMLS:C1837915","GARD:17176","DOID:0060474","MEDGEN:332974","MESH:C563918"],"synonyms":[{"name":"Chuvash erythrocytosis","type":"related"},{"name":"Chuvash erythromatosis","type":"exact"},{"name":"Chuvash polycythemia","type":"exact"},{"name":"Chuvash type polycythemia","type":"exact"},{"name":"ECYT2","type":"related"},{"name":"VHL familial polycythemia","type":"exact"},{"name":"Von Hippel-Lindau-dependent polycythemia","type":"exact"},{"name":"autosomal recessive benign erythrocytosis","type":"exact"},{"name":"erythrocytosis, autosomal recessive benign","type":"related"},{"name":"erythrocytosis, familial, 2","type":"related"},{"name":"erythrocytosis, familial, type 2","type":"exact"},{"name":"familial erythrocytosis 2","type":"exact"},{"name":"familial polycythemia caused by mutation in VHL","type":"exact"},{"name":"polycythemia, Chuvash type","type":"related"},{"name":"polycythemia, VHL-dependent","type":"related"}],"termid":"MONDO:0009892","xrefs":{"Monarch":{"xref_id":"0009892"}}}


id: GO:0009441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycolate, the anion of hydroxyethanoic acid (glycolic acid).","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glycolate metabolic process","secondary_identifiers":["MetaCyc:GLYCOLATEMET-PWY"],"synonyms":[{"name":"glycolate metabolism","type":"exact"}],"termid":"GO:0009441"}


id: PBO:0080842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 1 pseudogene 6","termid":"PBO:0080842"}


id: MONDO:0017979
data:
  {"annotated_genes":["SJAG_01787","SJAG_00610","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86138],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013767"},{"annotations":[85308,85309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000024"}]},"cv_name":"mondo","definition":"Autoimmune lymphoproliferative syndrome (ALPS) is a rare, inherited disorder characterized by non-malignant lymphoproliferation, multilineage cytopenias, and a lifelong increased risk of Hodgkin's and non-Hodgkin's lymphoma.","definition_xrefs":["Orphanet:3261"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"lymphoid hemopathy","termid":"MONDO:0015757"},{"relation_name":"is_a","term_name":"type IV hypersensitivity disease","termid":"MONDO:0002459"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"},{"relation_name":"is_a","term_name":"lymphoproliferative syndrome","termid":"MONDO:0016537"},{"relation_name":"is_a","term_name":"neoplastic syndrome","termid":"MONDO:0021058"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune lymphoproliferative syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:6688","ICD9:279.41","MedDRA:10069521","icd11.foundation:1072688797","CSP:1560-5548","MESH:D056735","GARD:8686","NANDO:1200352","NANDO:2200726","NCIT:C37864"],"synonyms":[{"name":"ALPS","type":"exact"},{"name":"ALPS (autoimmune lymphoproliferative syndrome)","type":"exact"},{"name":"Canale-Smith syndrome","type":"exact"},{"name":"FAS deficiency","type":"exact"},{"name":"autoimmune lymphoproliferative syndrome type 1, autosomal dominant","type":"related"}],"termid":"MONDO:0017979","terms_by_termid":{"MONDO:0013767":null,"MONDO:8000024":null},"xrefs":{"Monarch":{"xref_id":"0017979"}}}


id: GO:0044857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of plasma membrane rafts.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane raft organization","termid":"GO:0031579"},{"relation_name":"part_of","term_name":"plasma membrane organization","termid":"GO:0007009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"plasma membrane raft organization","termid":"GO:0044857"}


id: MONDO:0018708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tongue squamous cell carcinoma","termid":"MONDO:0000500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"squamous cell carcinoma of the oral tongue","secondary_identifiers":["Orphanet:457252"],"synonyms":[{"name":"OTSCC","type":"exact"},{"name":"oral tongue squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0018708","xrefs":{"Monarch":{"xref_id":"0018708"}}}


id: GO:0034188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an apolipoprotein A-I receptor ligand and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:rl","GOC:bf","GOC:BHF","PMID:16443932","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"},{"relation_name":"is_a","term_name":"apolipoprotein receptor activity","termid":"GO:0030226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038024"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674","GO:0038024"],"is_obsolete":false,"name":"apolipoprotein A-I receptor activity","termid":"GO:0034188"}


id: PBO:0017097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin family Schizosaccharomyces specific protein Mug170","termid":"PBO:0017097"}


id: PBO:0025455
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperoxaluria","termid":"PBO:0025455"}


id: PBO:0027150
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vacuolar_serine_level","termid":"PBO:0027150"}


id: PBO:0050732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 18","termid":"PBO:0050732"}


id: PBO:0039570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 65","termid":"PBO:0039570"}


id: PBO:0031450
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_pre-replicative_complex_assembly","termid":"PBO:0031450"}


id: PBO:0078057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 47","termid":"PBO:0078057"}


id: PBO:0085556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein containing an N-terminal epsin-like domain; involved in clathrin recruitment and traffic between the Golgi and endosomes; associates with the clathrin adaptor Gga2p","termid":"PBO:0085556"}


id: PBO:0047190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 207 member C, pseudogene","termid":"PBO:0047190"}


id: PBO:0040995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BOLA3 divergent transcript","termid":"PBO:0040995"}


id: PBO:0065658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type H","termid":"PBO:0065658"}


id: GO:0019467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ornithine by decarboxylation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ornithine catabolic process","termid":"GO:0006593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248","GO:0006520"],"is_obsolete":false,"name":"ornithine catabolic process, by decarboxylation","secondary_identifiers":["MetaCyc:ORNDEG-PWY"],"synonyms":[{"name":"ornithine breakdown, by decarboxylation","type":"exact"},{"name":"ornithine degradation, by decarboxylation","type":"exact"}],"termid":"GO:0019467"}


id: FYPO:0005743
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of invertase activity (beta-fructofuranosidase activity) is normal (i.e. indistinguishable from wild type) under conditions of glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal invertase activity during glucose starvation","synonyms":[{"name":"normal beta-fructofuranosidase activity during glucose starvation","type":"exact"},{"name":"normal invertase activity during cellular response to glucose starvation","type":"exact"},{"name":"normal invertase activity during glucose depletion","type":"exact"},{"name":"normal invertase activity during glucose deprivation","type":"exact"},{"name":"normal invertase activity during glucose limitation","type":"related"}],"termid":"FYPO:0005743"}


id: MONDO:0011412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodegenerative disease that is characterized by intraneuronal inclusions of mutant neuroserpin resulting in progressive encephalopathy, dementia and seizures and has material basis in a mutation in the SERPINI1 gene inherited in an in autosomal dominant pattern.","definition_xrefs":["DOID:0050831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"},{"relation_name":"is_a","term_name":"Mendelian encephalopathy","termid":"MONDO:0100198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"familial encephalopathy with neuroserpin inclusion bodies","secondary_identifiers":["MEDGEN:346965","icd11.foundation:453919434","NORD:1123","MESH:C536841","GARD:10037","Orphanet:85110","OMIM:604218","SCTID:702421006","ICD9:348.39","UMLS:C1858680"],"synonyms":[{"name":"FENIB","type":"exact"},{"name":"encephalopathy, familial, with Collins bodies","type":"related"},{"name":"encephalopathy, familial, with neuroserpin inclusion bodies","type":"related"}],"termid":"MONDO:0011412","xrefs":{"Monarch":{"xref_id":"0011412"}}}


id: FYPO:0003311
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of phosphoribosylaminoimidazolecarboxamide formyltransferase (AICAR formyltransferase) activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abnormal phosphoribosylaminoimidazolecarboxamide formyltransferase activity","synonyms":[{"name":"abnormal AICAR formyltransferase activity","type":"exact"}],"termid":"FYPO:0003311"}


id: PBO:0056793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFF pseudogene 2","termid":"PBO:0056793"}


id: GO:0120118
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A mobile transmembrane junction at the tip of the flagellum of some kinetoplastid species linking the tip of a new growing flagellum to an older flagellum.","definition_xrefs":["PMID:26820516","PMID:11641501","PMID:15075226","PMID:16954145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell junction","termid":"GO:0030054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"flagella connector","termid":"GO:0120118"}


id: PATO:0002125
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's consisting a knot-like mass.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nodular","termid":"PATO:0002125"}


id: PBO:0035753
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_deactivation_of_mitotic_spindle_assembly_checkpoint","termid":"PBO:0035753"}


id: PBO:0081860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 792","termid":"PBO:0081860"}


id: MONDO:0054577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"bleeding disorder, platelet-type, 21","secondary_identifiers":["GARD:16230","OMIM:617443","MEDGEN:1386863","UMLS:C4479515"],"synonyms":[{"name":"BDPLT21","type":"related"},{"name":"bleeding disorder, platelet-type, 21","type":"exact"}],"termid":"MONDO:0054577","xrefs":{"Monarch":{"xref_id":"0054577"}}}


id: RO:0002450
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between molecular entities A and B where A can physically interact with B and in doing so positively regulates a process that B is capable of.  For example, A and B may be gene products and binding of B by A positively regulates the kinase activity of B.","direct_ancestors":[{"relation_name":"is_a","term_name":"activity_directly_regulates_activity_of","termid":"RO:0002448"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activity_directly_positively_regulates_activity_of","synonyms":[{"name":"molecularly increases activity of","type":"exact"}],"termid":"RO:0002450"}


id: GO:0003307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell, resulting a change in cell state that contributes to the progression of the heart over time.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Wnt signaling pathway","termid":"GO:0030111"},{"relation_name":"regulates","term_name":"Wnt signaling pathway involved in heart development","termid":"GO:0003306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Wnt signaling pathway involved in heart development","synonyms":[{"name":"regulation of Wnt receptor signaling pathway involved in heart development","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway involved in heart development","type":"exact"},{"name":"regulation of Wnt-activated signaling pathway involved in heart development","type":"exact"}],"termid":"GO:0003307"}


id: GO:0016043
data:
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id: PBO:0075946
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id: PBO:0066651
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras and Rab interactor like","termid":"PBO:0066651"}


id: GO:0102940
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phloroglucinol + S-adenosyl-L-methionine = H+ + 3,5-dihydroxyanisole + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete phloroglucinol O-methyltransferase activity (obsolete GO:0102940)","termid":"GO:0102940"}


id: MONDO:0012883
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive form of acute myeloid leukemia (AML), characterized by arrest of leukocyte differentiation at the promyelocyte stage, due to a specific chromosomal translocation t(15;17) in myeloid cells. APL manifests with easy bruising, hemorrhagic diathesis and fatigue.","definition_xrefs":["Orphanet:520"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bilineal acute myeloid leukemia","termid":"MONDO:0011118"},{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"acute promyelocytic leukemia","secondary_identifiers":["MEDGEN:44127","MESH:D015473","NORD:2003","NANDO:2200007","EFO:0000224","MedDRA:10001019","SCTID:110004001","UMLS:C0023487","DOID:0060318","OMIM:612376","GARD:538","DOID:0081081","ICDO:9866/3","NCIT:C3182"],"synonyms":[{"name":"AML M3","type":"exact"},{"name":"AML with t(15;17)(q22;q12)","type":"exact"},{"name":"AML with t(15;17)(q22;q12);(PML/RARalpha) and variants","type":"exact"},{"name":"APL","type":"exact"},{"name":"APML","type":"exact"},{"name":"APML - acute promyelocytic leukaemia","type":"exact"},{"name":"APML - acute promyelocytic leukemia","type":"exact"},{"name":"FAB M3","type":"exact"},{"name":"acute myeloblastic leukaemia 3","type":"exact"},{"name":"acute myeloblastic leukaemia type 3","type":"exact"},{"name":"acute myeloblastic leukemia 3","type":"exact"},{"name":"acute myeloblastic leukemia type 3","type":"exact"},{"name":"acute myeloid leukaemia M3","type":"exact"},{"name":"acute myeloid leukaemia with t(15;17)(q22;q12);(PML/RARalpha) and variants","type":"exact"},{"name":"acute myeloid leukemia M3","type":"exact"},{"name":"acute myeloid leukemia with t(15;17)(q22;q12);(PML/RARalpha) and variants","type":"exact"},{"name":"acute promyelocytic leukaemia with PML-rara","type":"exact"},{"name":"acute promyelocytic leukaemia with t(15;17)(q22;q12); PML-rara","type":"exact"},{"name":"acute promyelocytic leukaemia with t(15;17)(q22;q12); PML/rara","type":"exact"},{"name":"acute promyelocytic leukemia","type":"exact"},{"name":"acute promyelocytic leukemia with PML-rara","type":"exact"},{"name":"acute promyelocytic leukemia with t(15;17)(q22;q12); PML-rara","type":"exact"},{"name":"acute promyelocytic leukemia with t(15;17)(q22;q12); PML/rara","type":"exact"},{"name":"leukemia, acute promyelocytic","type":"related"},{"name":"leukemia, acute promyelocytic, somatic","type":"exact"},{"name":"promyelocytic leukaemia","type":"exact"},{"name":"promyelocytic leukemia","type":"exact"}],"termid":"MONDO:0012883","xrefs":{"Monarch":{"xref_id":"0012883"}}}


id: PBO:0005216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf10","termid":"PBO:0005216"}


id: PBO:0004170
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  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"present in a complex with Rlc1 and Cdc15","termid":"PBO:0004170"}


id: GO:0019673
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  {"annotated_genes":["SJAG_02783","SJAG_03188","SJAG_02648","SJAG_00890"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88679,115580,107876,102587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009298"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving GDP-mannose, a substance composed of mannose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00890":null,"SJAG_02648":null,"SJAG_02783":null,"SJAG_03188":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"GDP-mannose metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GDP-mannose metabolism","type":"exact"}],"termid":"GO:0019673","terms_by_termid":{"GO:0009298":null}}


id: PBO:0046557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group 48 member 1, envelope","termid":"PBO:0046557"}


id: PBO:0065480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome activator subunit 1","termid":"PBO:0065480"}


id: PBO:0057719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1302-4","termid":"PBO:0057719"}


id: GO:0019472
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 4-hydroxyproline, C5H9NO3, a derivative of the amino acid proline.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-hydroxyproline metabolic process","termid":"GO:0019471"},{"relation_name":"is_a","term_name":"modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic process","termid":"GO:1901607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"4-hydroxyproline biosynthetic process","synonyms":[{"name":"4-hydroxyproline anabolism","type":"exact"},{"name":"4-hydroxyproline biosynthesis","type":"exact"},{"name":"4-hydroxyproline formation","type":"exact"},{"name":"4-hydroxyproline synthesis","type":"exact"}],"termid":"GO:0019472"}


id: GO:0050587
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chloride + O2 = chlorite.","definition_xrefs":["EC:1.13.11.49","RHEA:21404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"chlorite O2-lyase activity","secondary_identifiers":["KEGG_REACTION:R05721","MetaCyc:1.13.11.49-RXN","UM-BBD_reactionID:r0982","GO:0030065"],"synonyms":[{"name":"chloride:oxygen oxidoreductase activity","type":"related"},{"name":"chlorite dismutase activity","type":"related"}],"termid":"GO:0050587"}


id: MONDO:0100203
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with parainfluenza virus type 1.","definition_xrefs":["PMID:27197630","MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respirovirus infectious disease","termid":"MONDO:0005940"},{"relation_name":"is_a","term_name":"parainfluenza infectious disease","termid":"MONDO:0100197"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parainfluenza virus type 1 infectious disease","synonyms":[{"name":"human respirovirus 1 infectious disease","type":"exact"},{"name":"infection caused by human parainfluenza virus 1","type":"exact"},{"name":"infection due to human parainfluenza virus 1","type":"exact"},{"name":"parainfluenza 1 infection","type":"related"}],"termid":"MONDO:0100203","xrefs":{"Monarch":{"xref_id":"0100203"}}}


id: GO:0006459
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete binding unfolded ER proteins (obsolete GO:0006459)","synonyms":[{"name":"binding unfolded ER proteins","type":"exact"}],"termid":"GO:0006459"}


id: PBO:0018126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HD domain protein (predicted)","termid":"PBO:0018126"}


id: GO:0047395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-(sn-glycero-3-phospho)-1D-myo-inositol + H2O = sn-glycerol 3-phosphate + myo-inositol + H+.","definition_xrefs":["EC:3.1.4.44","RHEA:16501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"glycerophosphoinositol glycerophosphodiesterase activity","secondary_identifiers":["MetaCyc:3.1.4.44-RXN","KEGG_REACTION:R01193","Reactome:R-HSA-6813740"],"synonyms":[{"name":"1-(sn-glycero-3-phospho)-1D-myo-inositol glycerophosphohydrolase activity","type":"related"},{"name":"sn-glycero(3)phosphoinositol glycerophosphohydrolase activity","type":"related"},{"name":"sn-glycero-3-phospho-1-inositol glycerophosphohydrolase activity","type":"related"}],"termid":"GO:0047395"}


id: PBO:0044519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DAAM2 antisense RNA 1","termid":"PBO:0044519"}


id: GO:0019864
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an immunoglobulin of an IgG isotype.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin binding","termid":"GO:0019865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"IgG binding","termid":"GO:0019864"}


id: GO:0100016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates thiamine biosynthetic process.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of thiamine biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100016)","termid":"GO:0100016"}


id: GO:0072318
data:
  {"annotated_genes":["SJAG_05296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89775],"is_not":false,"summary":null,"term":"GO:0072318"}]},"cv_name":"biological_process","definition":"The disaggregation of a clathrin coat into its constituent components; results in stripping or removing the clathrin coat from clathrin-coated vesicles (CCV) before fusing with their targets. CVVs transport cargo from plasma membrane and trans-Golgi to the endosomal system.","definition_xrefs":["PMID:8524399","PMID:11084334","PMID:11146663"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle uncoating","termid":"GO:0072319"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05296":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"clathrin coat disassembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"clathrin-coat disassembly","type":"exact"},{"name":"clathrin-coat uncoating","type":"exact"},{"name":"clathrin-coated vesicle uncoating","type":"exact"}],"termid":"GO:0072318","terms_by_termid":{"GO:0072318":null}}


id: PBO:0061061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NKAIN1 pseudogene 1","termid":"PBO:0061061"}


id: GO:0140285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which early and late endosomes undergo budding and fission reactions that separate regions destined for lysosomal degradation from carriers to be recycled to the plasma membrane.","definition_xrefs":["PMID:25416943","PMID:30220460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle fission","termid":"GO:0048285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endosome fission","termid":"GO:0140285"}


id: PBO:0079700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubinuclein 1","termid":"PBO:0079700"}


id: GO:0004157
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,6-dihydrouracil + H2O = 3-ureidopropionate.","definition_xrefs":["EC:3.5.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dihydropyrimidinase activity","secondary_identifiers":["MetaCyc:DIHYDROPYRIMIDINASE-RXN","RHEA:16121","Reactome:R-HSA-73589","Reactome:R-HSA-73618"],"synonyms":[{"name":"5,6-dihydropyrimidine amidohydrolase activity","type":"related"},{"name":"D-hydantoinase activity","type":"related"},{"name":"hydantoin peptidase activity","type":"related"},{"name":"hydantoinase activity","type":"related"},{"name":"hydropyrimidine hydrase activity","type":"related"},{"name":"pyrimidine hydrase activity","type":"related"}],"termid":"GO:0004157"}


id: PBO:0061985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily B member 4 pseudogene","termid":"PBO:0061985"}


id: GO:0043090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of amino acids into a cell or organelle.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"amino acid import","synonyms":[{"name":"amino acid uptake","type":"exact"}],"termid":"GO:0043090"}


id: GO:1904109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cholesterol import.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16772292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cholesterol transport","termid":"GO:0032376"},{"relation_name":"is_a","term_name":"regulation of cholesterol import","termid":"GO:0060620"},{"relation_name":"positively_regulates","term_name":"cholesterol import","termid":"GO:0070508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of cholesterol import","synonyms":[{"name":"activation of cholesterol import","type":"narrow"},{"name":"activation of cholesterol uptake","type":"narrow"},{"name":"positive regulation of cholesterol uptake","type":"exact"},{"name":"up regulation of cholesterol import","type":"exact"},{"name":"up regulation of cholesterol uptake","type":"exact"},{"name":"up-regulation of cholesterol import","type":"exact"},{"name":"up-regulation of cholesterol uptake","type":"exact"},{"name":"upregulation of cholesterol import","type":"exact"},{"name":"upregulation of cholesterol uptake","type":"exact"}],"termid":"GO:1904109"}


id: PBO:0067603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 767, pseudogene","termid":"PBO:0067603"}


id: GO:0042068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving pteridine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"pteridine metabolic process","termid":"GO:0019889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pteridine metabolic process","synonyms":[{"name":"regulation of pteridine metabolism","type":"exact"}],"termid":"GO:0042068"}


id: PBO:0061844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OIP5 antisense RNA 1","termid":"PBO:0061844"}


id: PBO:0003830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ksp1 (predicted)","termid":"PBO:0003830"}


id: PBO:0054972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2386","termid":"PBO:0054972"}


id: MONDO:0002064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign diffuse vascular proliferation in the breast. It is characterized by the formation of capillary-sized and cavernous vascular spaces.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"capillary disorder","termid":"MONDO:0001574"},{"relation_name":"is_a","term_name":"breast disorder","termid":"MONDO:0002657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast angiomatosis","secondary_identifiers":["NCIT:C40381","DOID:1637","UMLS:C1511284","MEDGEN:307304"],"termid":"MONDO:0002064","xrefs":{"Monarch":{"xref_id":"0002064"}}}


id: GO:0030262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Alterations undergone by nuclei at the molecular and morphological level as part of the execution phase of apoptosis.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly involved in execution phase of apoptosis","termid":"GO:0006921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic nuclear changes","synonyms":[{"name":"apoptotic nuclear change","type":"narrow"}],"termid":"GO:0030262"}


id: PBO:0046677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extended synaptotagmin 3","termid":"PBO:0046677"}


id: PBO:0077106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 10","termid":"PBO:0077106"}


id: PBO:0111424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Exo3","termid":"PBO:0111424"}


id: MONDO:1011327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammatory disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inflammatory disease, non-human animal","termid":"MONDO:1011327","xrefs":{"Monarch":{"xref_id":"1011327"}}}


id: GO:0140818
data:
  {"annotated_genes":["SJAG_04488"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98486],"is_not":false,"summary":null,"term":"GO:0140818"}]},"cv_name":"molecular_function","definition":"A 5'-end triphospho-[mRNA] + H2O = a 5'-end diphospho-[mRNA] + H+ + phosphate.","definition_xrefs":["PMID:9473487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04488":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"mRNA 5'-triphosphate monophosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.6.1.74","MetaCyc:POLYNUCLEOTIDE-5-PHOSPHATASE-RXN","RHEA:67004"],"synonyms":[{"name":"mRNA 5'-phosphatase activity","type":"exact"}],"termid":"GO:0140818","terms_by_termid":{"GO:0140818":null}}


id: PBO:0085389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane localized uracil permease; expression is tightly regulated by uracil levels and environmental cues; conformational alterations induced by unfolding or substrate binding result in Rsp5p-mediated ubiquitination and degradation","termid":"PBO:0085389"}


id: PBO:0045265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNL-type zinc finger","termid":"PBO:0045265"}


id: GO:0010977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of neuron projection development. Neuron projection development is the process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites).","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron projection development","termid":"GO:0010975"},{"relation_name":"is_a","term_name":"negative regulation of cell projection organization","termid":"GO:0031345"},{"relation_name":"negatively_regulates","term_name":"neuron projection development","termid":"GO:0031175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuron projection development","synonyms":[{"name":"growth cone collapse","type":"related"},{"name":"negative regulation of neurite biosynthesis","type":"narrow"},{"name":"negative regulation of neurite development","type":"narrow"},{"name":"negative regulation of neurite formation","type":"narrow"},{"name":"negative regulation of neurite growth","type":"narrow"}],"termid":"GO:0010977"}


id: MONDO:0011926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"psoriasis, susceptibility to","termid":"MONDO:0100171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psoriasis 9, susceptibility to","secondary_identifiers":["UMLS:C1842897","DOID:0111284","MEDGEN:334635","OMIM:607857"],"synonyms":[{"name":"PSORS9","type":"exact"},{"name":"psoriasis 9, susceptibility to","type":"exact"},{"name":"psoriasis susceptibility 9","type":"exact"}],"termid":"MONDO:0011926","xrefs":{"Monarch":{"xref_id":"0011926"}}}


id: PBO:0054706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2115","termid":"PBO:0054706"}


id: PBO:0055134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2553","termid":"PBO:0055134"}


id: MONDO:0013557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Hermansky-Pudlak syndrome in which the cause of the disease is a mutation in the HPS5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hermansky-Pudlak syndrome without pulmonary fibrosis","termid":"MONDO:0016502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"Hermansky-Pudlak syndrome 5","secondary_identifiers":["OMIM:614074","MEDGEN:854711","DOID:0060543","UMLS:C3888004","GARD:18334"],"synonyms":[{"name":"HPS5","type":"related"},{"name":"HPS5 Hermansky-Pudlak syndrome","type":"exact"},{"name":"Hermansky-Pudlak syndrome 5","type":"exact"},{"name":"Hermansky-Pudlak syndrome caused by mutation in HPS5","type":"exact"},{"name":"Hermansky-Pudlak syndrome type 5","type":"exact"}],"termid":"MONDO:0013557","xrefs":{"Monarch":{"xref_id":"0013557"}}}


id: GO:2000908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucomannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucomannan catabolic process","termid":"GO:2000898"},{"relation_name":"is_a","term_name":"positive regulation of mannan catabolic process","termid":"GO:2000996"},{"relation_name":"positively_regulates","term_name":"glucomannan catabolic process","termid":"GO:2000884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of glucomannan catabolic process","synonyms":[{"name":"positive regulation of glucomannan catabolism","type":"exact"}],"termid":"GO:2000908"}


id: GO:0005416
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: amino acid(out) + cation(out) = amino acid(in) + cation(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"},{"relation_name":"is_a","term_name":"solute:monoatomic cation symporter activity","termid":"GO:0015294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"amino acid:monoatomic cation symporter activity","synonyms":[{"name":"amino acid:cation symporter activity","type":"broad"},{"name":"cation/amino acid symporter activity","type":"exact"},{"name":"cation:amino acid symporter activity","type":"exact"}],"termid":"GO:0005416"}


id: MOD:01673
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an N-acetylaminohexose group through a glycosidic bond.","definition_xrefs":["Unimod:43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylhexosaminylated residue","termid":"MOD:00436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N-acetylaminohexosylated residue","synonyms":[{"name":"HexNAc","type":"related"},{"name":"HexNAcRes","type":"exact"},{"name":"N-Acetylhexosamine","type":"related"}],"termid":"MOD:01673"}


id: PBO:0065136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cAMP-dependent X-linked catalytic subunit","termid":"PBO:0065136"}


id: PBO:0034502
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_localization_to_telomere","termid":"PBO:0034502"}


id: PBO:0031238
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_osmotic_stress","termid":"PBO:0031238"}


id: FYPO:0001556
data:
  {"alleles_by_uniquename":{"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118892,118893,118896,118900,118905,118908],"is_not":false,"summary":null,"term":"FYPO:0001556"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more nuclear envelope than normal. Excess nuclear envelopes may take the form of intranuclear membrane stacks or invaginations, or small cytoplasmic spheres that are attached to the nucleus, have double lipid bilayer membranes, and may contain structures resembling nuclear pores.","definition_xrefs":["PomBase:mah","PMID:22156749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology during vegetative growth","termid":"FYPO:0000769"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01906":null,"SJAG_02763":null,"SJAG_03940":null},"genotype_count":6,"genotypes_by_uniquename":{"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1cat(D422E,D424E aa)","display_uniquename":"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-2","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002403"],"is_obsolete":false,"name":"excess nuclear envelope present","references_by_uniquename":{"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_02763","SJAG_01906","SJAG_03940"],"single_locus_genotype_uniquenames":["nem2delta","ned1delta","nem1delta","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"excess nuclear envelope present during mitotic cell cycle","type":"related"},{"name":"excess nuclear envelope present during vegetative growth","type":"exact"},{"name":"increased nuclear envelope proliferation","type":"related"},{"name":"nuclear envelope present in greater amount","type":"exact"}],"termid":"FYPO:0001556","terms_by_termid":{"FYPO:0001556":null,"FYPO_EXT:0000001":null}}


id: PBO:0069227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 482, pseudogene","termid":"PBO:0069227"}


id: PBO:0091655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine ribohydrolase Urh1","termid":"PBO:0091655"}


id: PBO:0067298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 383, pseudogene","termid":"PBO:0067298"}


id: MONDO:0007516
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectrodactyly and ectodermal dysplasia without cleft lip/palate","secondary_identifiers":["MEDGEN:377536","MESH:C565065","Orphanet:1888","OMIM:129810","UMLS:C1851849"],"synonyms":[{"name":"EEC syndrome without cleft Lip/palate","type":"related"},{"name":"ectrodactyly and ectodermal dysplasia without cleft lip/palate","type":"exact"},{"name":"ectrodactyly-ectodermal dysplasia without clefting syndrome","type":"exact"}],"termid":"MONDO:0007516","xrefs":{"Monarch":{"xref_id":"0007516"}}}


id: MOD:00054
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to N-acetyl-L-glutamine.","definition_xrefs":["RESID:AA0045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamine residue","termid":"MOD:00907"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N-acetyl-L-glutamine","synonyms":[{"name":"(2S)-2-acetamido-5-pentanediamic acid","type":"exact"},{"name":"2-acetylamino-5-amino-5-oxopentanoic acid","type":"exact"},{"name":"2-acetylamino-5-pentanediamic acid","type":"exact"},{"name":"2-acetylazanyl-5-azanyl-5-oxopentanoic acid","type":"exact"},{"name":"AcGln","type":"exact"},{"name":"N-acetyl-L-glutamine","type":"exact"},{"name":"N-acetylated L-glutamine","type":"exact"},{"name":"acetylglutamine","type":"exact"}],"termid":"MOD:00054"}


id: GO:0150048
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse of a granule cell fiber onto the dendrites of a Purkinje cell in cerebellum.","definition_xrefs":["GOC:aruk","PMID:12427822","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric, glutamatergic, excitatory synapse","termid":"GO:0098985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cerebellar granule cell to Purkinje cell synapse","synonyms":[{"name":"cerebellar parallel fiber to Purkinje cell synapse","type":"exact"}],"termid":"GO:0150048"}


id: GO:0003958
data:
  {"annotated_genes":["SJAG_04397","SJAG_04270","SJAG_00972"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87699,92675,107201],"is_not":false,"summary":null,"term":"GO:0003958"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H+ + n oxidized hemoprotein = NADP+ + n reduced hemoprotein.","definition_xrefs":["EC:1.6.2.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor","termid":"GO:0016653"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00972":null,"SJAG_04270":null,"SJAG_04397":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"NADPH-hemoprotein reductase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:24040","MetaCyc:NADPH--FERRIHEMOPROTEIN-REDUCTASE-RXN","Reactome:R-HSA-76494"],"synonyms":[{"name":"CPR activity","type":"related"},{"name":"FAD-cytochrome c reductase activity","type":"related"},{"name":"NADP--cytochrome c reductase activity","type":"narrow"},{"name":"NADP--cytochrome reductase activity","type":"narrow"},{"name":"NADPH--cytochrome P450 oxidoreductase activity","type":"narrow"},{"name":"NADPH--cytochrome P450 reductase activity","type":"narrow"},{"name":"NADPH--cytochrome c oxidoreductase activity","type":"narrow"},{"name":"NADPH--cytochrome c reductase activity","type":"narrow"},{"name":"NADPH--ferricytochrome c oxidoreductase activity","type":"narrow"},{"name":"NADPH--ferrihemoprotein reductase activity","type":"narrow"},{"name":"NADPH-cytochrome P-450 oxidoreductase activity","type":"related"},{"name":"NADPH-cytochrome p-450 reductase activity","type":"related"},{"name":"NADPH-dependent cytochrome c reductase activity","type":"narrow"},{"name":"NADPH-ferrihemoprotein reductase activity","type":"exact"},{"name":"NADPH:P-450 reductase activity","type":"related"},{"name":"NADPH:P450 reductase activity","type":"narrow"},{"name":"NADPH:cytochrome P450 reductase activity","type":"exact"},{"name":"NADPH:cytochrome c reductase activity","type":"exact"},{"name":"NADPH:ferrihemoprotein oxidoreductase activity","type":"related"},{"name":"NADPH:hemoprotein oxidoreductase activity","type":"related"},{"name":"POR","type":"related"},{"name":"TPNH(2) cytochrome c reductase activity","type":"narrow"},{"name":"TPNH-cytochrome c reductase activity","type":"narrow"},{"name":"TPNH2 cytochrome c reductase activity","type":"related"},{"name":"aldehyde reductase (NADPH-dependent) activity","type":"related"},{"name":"cytochrome P-450 reductase activity","type":"related"},{"name":"cytochrome P450 reductase activity","type":"narrow"},{"name":"cytochrome c reductase (reduced nicotinamide adenine dinucleotide phosphate, NADPH, NADPH-dependent) activity","type":"narrow"},{"name":"dihydroxynicotinamide adenine dinucleotide phosphate-cytochrome c reductase activity","type":"narrow"},{"name":"ferrihemoprotein P-450 reductase activity","type":"related"},{"name":"reduced nicotinamide adenine dinucleotide phosphate-cytochrome c reductase activity","type":"narrow"},{"name":"reductase, cytochrome c (reduced nicotinamide adenine dinucleotide phosphate) activity","type":"narrow"}],"termid":"GO:0003958","terms_by_termid":{"GO:0003958":null}}


id: GO:1903933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of DNA primase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:14766746"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of DNA primase activity (obsolete GO:1903933)","synonyms":[{"name":"down regulation of DNA primase activity","type":"exact"},{"name":"down-regulation of DNA primase activity","type":"exact"},{"name":"downregulation of DNA primase activity","type":"exact"},{"name":"inhibition of DNA primase activity","type":"narrow"}],"termid":"GO:1903933"}


id: GO:0015655
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: alanine(out) + Na+(out) = alanine(in) + Na+(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:sodium symporter activity","termid":"GO:0005283"},{"relation_name":"is_a","term_name":"organic acid:sodium symporter activity","termid":"GO:0005343"},{"relation_name":"is_a","term_name":"alanine transmembrane transporter activity","termid":"GO:0022858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"alanine:sodium symporter activity","secondary_identifiers":["GO:0044670","MetaCyc:TRANS-RXN-125","RHEA:29283"],"synonyms":[{"name":"sodium:alanine symporter activity","type":"exact"}],"termid":"GO:0015655"}


id: FYPO:0005017
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which ribosome biogenesis is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal ribosome biogenesis","synonyms":[{"name":"abnormal ribosome biogenesis during mitotic cell cycle","type":"related"},{"name":"abnormal ribosome biogenesis during vegetative growth","type":"exact"}],"termid":"FYPO:0005017"}


id: MONDO:0010783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Alzheimer disease, susceptibility to, mitochondrial (obsolete MONDO:0010783)","termid":"MONDO:0010783","xrefs":{"Monarch":{"xref_id":"0010783"}}}


id: MONDO:0008698
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A finding indicating the lack of adequate relaxation of the lower esophageal sphincter resulting in difficulty swallowing food.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"idiopathic achalasia","termid":"MONDO:0019635"},{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"achalasia","secondary_identifiers":["ICD9:530.0","SCTID:235630008","MEDGEN:5023","UMLS:C0014848","DOID:9164","HP:0002571","icd11.foundation:636464846"],"synonyms":[{"name":"achalasia","type":"exact"},{"name":"achalasia (disease)","type":"exact"},{"name":"achalasia of cardia","type":"exact"},{"name":"achalasia of esophagus","type":"exact"},{"name":"achalasia of oesophagus","type":"exact"},{"name":"cardiospasm","type":"exact"},{"name":"esophageal achalasia","type":"exact"},{"name":"hypertensive lower esophageal sphincter","type":"exact"},{"name":"lack of reflex relaxation of lower oesophageal sphincter","type":"exact"}],"termid":"MONDO:0008698","xrefs":{"Monarch":{"xref_id":"0008698"}}}


id: PBO:0049182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gremlin 2, DAN family BMP antagonist","termid":"PBO:0049182"}


id: MONDO:0015873
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paget disease of the nipple describes a rare presentation of breast cancer, seen most frequently in women aged 50-60, manifesting with nipple drainage and itching, erythema, crusty and excoriated nipple, thickened plaques, and hyperpigmentation (less frequently). It is due to tumor cells invading the nipple-areola complex and represents 1-3% of all new breast cancer diagnoses.","definition_xrefs":["Orphanet:180275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammary Paget disease","termid":"MONDO:0002648"},{"relation_name":"is_a","term_name":"nipple carcinoma","termid":"MONDO:0003950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"Paget disease of the nipple","secondary_identifiers":["MedDRA:10033367","GARD:7303","MEDGEN:352830","icd11.foundation:1295910447","SCTID:403946000","ONCOTREE:PD","UMLS:C1704323","NCIT:C3301","NORD:1544"],"synonyms":[{"name":"PD","type":"related"},{"name":"Paget disease of the breast","type":"broad"},{"name":"Paget disease of the nipple","type":"exact"},{"name":"Paget's Disease of the Breast","type":"exact"},{"name":"Paget's disease of nipple","type":"exact"},{"name":"Paget's disease of the nipple","type":"exact"},{"name":"Paget's disease, mammary","type":"related"},{"name":"mammary Paget disease","type":"broad"},{"name":"nipple Paget's disease","type":"exact"}],"termid":"MONDO:0015873","xrefs":{"Monarch":{"xref_id":"0015873"}}}


id: PBO:0004824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific UPF0300 family protein 4","termid":"PBO:0004824"}


id: GO:0042690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of crystal cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of crystal cell differentiation","termid":"GO:0042689"},{"relation_name":"is_a","term_name":"negative regulation of hemocyte differentiation","termid":"GO:0045611"},{"relation_name":"negatively_regulates","term_name":"crystal cell differentiation","termid":"GO:0042688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of crystal cell differentiation","synonyms":[{"name":"down regulation of crystal cell differentiation","type":"exact"},{"name":"down-regulation of crystal cell differentiation","type":"exact"},{"name":"downregulation of crystal cell differentiation","type":"exact"},{"name":"inhibition of crystal cell differentiation","type":"narrow"}],"termid":"GO:0042690"}


id: PBO:0062061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily Y member 1","termid":"PBO:0062061"}


id: PBO:0063640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pepsinogen A3","termid":"PBO:0063640"}


id: MONDO:0016241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neurodevelopmental disorder characterized by recurrent episodes of hemiplegia and paroxysmal disturbances associated with persistent developmental delay and cognitive impairment.","definition_xrefs":["Orphanet:2131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemiplegia","termid":"MONDO:0001170"},{"relation_name":"is_a","term_name":"alternating hemiplegia","termid":"MONDO:0016210"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"alternating hemiplegia of childhood","secondary_identifiers":["MEDGEN:90925","NANDO:2200883","GARD:11","NANDO:1200403","NANDO:2100239","NANDO:2200357","MESH:C536589","NANDO:1200525","SCTID:230466004","NCIT:C35261","DOID:0050635","UMLS:C0338488","OMIMPS:104290","icd11.foundation:301329822","NORD:758"],"synonyms":[{"name":"AHC","type":"exact"},{"name":"adrenal hypoplasia congenita","type":"exact"},{"name":"alternating hemiplegia","type":"related"},{"name":"alternating hemiplegia of childhood","type":"exact"},{"name":"alternating hemiplegia syndrome","type":"related"},{"name":"childhood alternating hemiplegia","type":"exact"},{"name":"congenital adrenal Hypoplasia","type":"exact"},{"name":"congenital adrenal gland hypoplasia","type":"exact"},{"name":"paediatric alternating hemiplegia","type":"exact"},{"name":"pediatric alternating hemiplegia","type":"exact"}],"termid":"MONDO:0016241","xrefs":{"Monarch":{"xref_id":"0016241"}}}


id: PBO:0110188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial poly(A) RNA polymerase Atp25","termid":"PBO:0110188"}


id: PBO:0063639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 5, pseudogene","termid":"PBO:0063639"}


id: PR:Q10163
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- smb1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein-associated protein B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.08","synonyms":[{"name":"Sm protein B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Sm-B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SmB (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-smb1","type":"exact"},{"name":"snRNP-B (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10163"}


id: MONDO:0021289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the caecum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colon carcinoma in situ","termid":"MONDO:0004663"},{"relation_name":"is_a","term_name":"cecum carcinoma","termid":"MONDO:0006029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"carcinoma in situ of cecum","secondary_identifiers":["NCIT:C4594","MEDGEN:83854","UMLS:C0347126","SCTID:92559007"],"synonyms":[{"name":"caecum carcinoma in situ","type":"exact"},{"name":"caecum in situ carcinoma","type":"exact"},{"name":"carcinoma in situ of caecum","type":"exact"},{"name":"carcinoma in situ of the cecum","type":"exact"},{"name":"cecum carcinoma in situ","type":"exact"},{"name":"cecum carcinoma in situ aJCC v6","type":"exact"},{"name":"cecum carcinoma in situ aJCC v7","type":"exact"},{"name":"stage 0 caecum carcinoma","type":"exact"},{"name":"stage 0 cecum carcinoma","type":"exact"}],"termid":"MONDO:0021289","xrefs":{"Monarch":{"xref_id":"0021289"}}}


id: PBO:0071610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 28","termid":"PBO:0071610"}


id: MOD:00480
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["Unimod:105#C","URL:http://www.appliedbiosystems.com/products/productdetail.cfm?prod_id=153","OMSSA:129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Applied Biosystems cleavable ICAT(TM) light","synonyms":[{"name":"Applied Biosystems cleavable ICAT(TM) light","type":"related"},{"name":"ICAT-C","type":"related"},{"name":"icatlight","type":"exact"}],"termid":"MOD:00480"}


id: PBO:0077003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 12 pseudogene 5","termid":"PBO:0077003"}


id: GO:0120133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the assembly of actin cortical patches.","definition_xrefs":["PMID:19962315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin cytoskeleton organization","termid":"GO:0032956"},{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"negatively_regulates","term_name":"actin cortical patch assembly","termid":"GO:0000147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of actin cortical patch assembly","synonyms":[{"name":"down regulation of actin cortical patch assembly","type":"exact"},{"name":"down-regulation of actin cortical patch assembly","type":"exact"},{"name":"downregulation of actin cortical patch assembly","type":"exact"},{"name":"inhibition of actin cortical patch assembly","type":"narrow"}],"termid":"GO:0120133"}


id: PBO:0067544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 690, pseudogene","termid":"PBO:0067544"}


id: MOD:00410
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(N-isopropylcarboxamidomethyl)-L-cysteine.","definition_xrefs":["Unimod:17#C","PubMed:11465505","PubMed:8465942","OMSSA:84"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(N-isopropylcarboxamidomethyl)-L-cysteine","synonyms":[{"name":"N-isopropylcarboxamidomethyl","type":"related"},{"name":"NIPCAM","type":"related"},{"name":"nipcam","type":"exact"}],"termid":"MOD:00410"}


id: GO:0060835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by an extracellular ligand binding to a transforming growth factor beta receptor on the surface of a target cell, which contributes to the specification of the oral/aboral axis.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor receptor beta signaling pathway involved in oral/aboral axis specification (obsolete GO:0060835)","synonyms":[{"name":"transforming growth factor receptor beta signalling pathway involved in oral/aboral axis specification","type":"exact"}],"termid":"GO:0060835"}


