# terms

id: GO:0035020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Rac protein signal transduction.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small GTPase mediated signal transduction","termid":"GO:0051056"},{"relation_name":"regulates","term_name":"Rac protein signal transduction","termid":"GO:0016601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Rac protein signal transduction","termid":"GO:0035020"}


id: PBO:0002308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin-protein ligase E3 Pub1","termid":"PBO:0002308"}


id: GO:0048369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the lateral mesoderm are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm morphogenesis","termid":"GO:0048332"},{"relation_name":"is_a","term_name":"mesenchyme morphogenesis","termid":"GO:0072132"},{"relation_name":"part_of","term_name":"lateral mesoderm development","termid":"GO:0048368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral mesoderm morphogenesis","synonyms":[{"name":"lateral plate mesoderm morphogenesis","type":"exact"}],"termid":"GO:0048369"}


id: GO:2000165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of planar cell polarity pathway involved in pericardium morphogenesis.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of planar cell polarity pathway involved in pericardium morphogenesis (obsolete GO:2000165)","termid":"GO:2000165"}


id: GO:0051034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of tRNA, transfer ribonucleic acid, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA transmembrane transporter activity","termid":"GO:0051033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"tRNA transmembrane transporter activity","termid":"GO:0051034"}


id: PBO:0053681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 868","termid":"PBO:0053681"}


id: PBO:0085016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-formyltyrosine oxidase; sporulation-specific microsomal enzyme involved in the production of N,N-bisformyl dityrosine required for spore wall maturation, homologous to cytochrome P-450s; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively","termid":"PBO:0085016"}


id: FYPO:0003673
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of ATP binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal ATP binding","termid":"FYPO:0003673"}


id: PBO:0042642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 17 pseudogene","termid":"PBO:0042642"}


id: GO:1903543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of exosomal secretion.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24105262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"positive regulation of exocytosis","termid":"GO:0045921"},{"relation_name":"is_a","term_name":"regulation of exosomal secretion","termid":"GO:1903541"},{"relation_name":"positively_regulates","term_name":"exosomal secretion","termid":"GO:1990182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192","GO:0044085"],"is_obsolete":false,"name":"positive regulation of exosomal secretion","synonyms":[{"name":"activation of exosomal protein secretion","type":"narrow"},{"name":"activation of exosomal secretion","type":"narrow"},{"name":"activation of exosomal secretory pathway","type":"narrow"},{"name":"activation of extracellular vesicular exosome secretion","type":"narrow"},{"name":"activation of secretion of exosome","type":"narrow"},{"name":"positive regulation of exosomal protein secretion","type":"narrow"},{"name":"positive regulation of exosomal secretory pathway","type":"exact"},{"name":"positive regulation of extracellular vesicular exosome secretion","type":"exact"},{"name":"positive regulation of secretion of exosome","type":"exact"},{"name":"up regulation of exosomal protein secretion","type":"narrow"},{"name":"up regulation of exosomal secretion","type":"exact"},{"name":"up regulation of exosomal secretory pathway","type":"exact"},{"name":"up regulation of extracellular vesicular exosome secretion","type":"exact"},{"name":"up regulation of secretion of exosome","type":"exact"},{"name":"up-regulation of exosomal protein secretion","type":"narrow"},{"name":"up-regulation of exosomal secretion","type":"exact"},{"name":"up-regulation of exosomal secretory pathway","type":"exact"},{"name":"up-regulation of extracellular vesicular exosome secretion","type":"exact"},{"name":"up-regulation of secretion of exosome","type":"exact"},{"name":"upregulation of exosomal protein secretion","type":"narrow"},{"name":"upregulation of exosomal secretion","type":"exact"},{"name":"upregulation of exosomal secretory pathway","type":"exact"},{"name":"upregulation of extracellular vesicular exosome secretion","type":"exact"},{"name":"upregulation of secretion of exosome","type":"exact"}],"termid":"GO:1903543"}


id: PR:Q12702
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pab1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q12702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase PP2A regulatory subunit B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.07c","synonyms":[{"name":"PR55 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pab1","type":"exact"},{"name":"protein phosphatase 2A 55 kDa regulatory subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q12702"}


id: PBO:0067141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 189, pseudogene","termid":"PBO:0067141"}


id: PBO:0090663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human mmtag2 ortholog, implicated in splicing","termid":"PBO:0090663"}


id: MONDO:0004851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute myocarditis","termid":"MONDO:0002815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"toxic myocarditis","secondary_identifiers":["ICD9:422.93","MEDGEN:510049","DOID:9694","SCTID:31993003","UMLS:C0155691"],"termid":"MONDO:0004851","xrefs":{"Monarch":{"xref_id":"0004851"}}}


id: PBO:0087430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit B of V1 peripheral membrane domain of vacuolar H+-ATPase; electrogenic proton pump found throughout the endomembrane system; contains nucleotide binding sites; also detected in the cytoplasm; protein abundance increases in response to DNA replication stress; human homolog ATP6V1B1, implicated in autosomal-recessive distal renal tubular acidosis (RTA) with sensorineural deafness, complements yeast null mutant","termid":"PBO:0087430"}


id: PBO:0072948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 28","termid":"PBO:0072948"}


id: PBO:0028206
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_mitotic_spindle_midzone","termid":"PBO:0028206"}


id: FYPO:0006004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic microtubule organization is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","GO:0031122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0000899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal interphase microtubule organization","synonyms":[{"name":"normal cytoplasmic microtubule organization during interphase during vegetative growth","type":"exact"},{"name":"normal cytoplasmic microtubule organization during interphase of mitotic cell cycle","type":"exact"},{"name":"normal cytoplasmic microtubule organization during mitotic interphase","type":"exact"},{"name":"normal interphase cytoplasmic microtubule organization","type":"exact"},{"name":"normal interphase microtubule organisation","type":"exact"}],"termid":"FYPO:0006004"}


id: GO:0070808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Hulle cell development, a process that leads to the formation of Hulle cells. Hulle cells are specialized multinucleate cells that originate from a nest-like aggregation of hyphae during sexual development and serve as nurse cells to the developing cleistothecium, or fruiting body.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"Hulle cell development","termid":"GO:0070792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of Hulle cell development","termid":"GO:0070808"}


id: MONDO:0009094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermochondrocorneal dystrophy is characterized by osteochondrodystrophy of the hands and feet, corneal dystrophy and the presence of skin nodules clustered around the metacarpophalangeal and interphalangeal joints, around the nose and ears and on the posterior surface of the elbow. Gingival lesions may also be present. It has been described in less than 20 patients. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:79149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dermochondrocorneal dystrophy","secondary_identifiers":["MEDGEN:98151","UMLS:C0432288","GARD:1815","ICD9:379.99","icd11.foundation:1305138145","MESH:C535375","OMIM:221800","SCTID:254150007"],"synonyms":[{"name":"DCCD","type":"related"},{"name":"Dermochondrocorneal dystrophy of François","type":"related"},{"name":"FranC'ois syndrome","type":"exact"},{"name":"Francois syndrome","type":"related"},{"name":"François syndrome","type":"exact"},{"name":"dermochondrocorneal dystrophy","type":"exact"}],"termid":"MONDO:0009094","xrefs":{"Monarch":{"xref_id":"0009094"}}}


id: MONDO:1012480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cervical vertebral compressive myelopathy, non-human animal","termid":"MONDO:1011891"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical vertebral compressive myelopathy, mountain zebra","secondary_identifiers":["OMIA:001894-9791"],"termid":"MONDO:1012480","xrefs":{"Monarch":{"xref_id":"1012480"}}}


id: PBO:0081325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 114 pseudogene 1","termid":"PBO:0081325"}


id: PR:O74968
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- usp102 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 small nuclear ribonucleoprotein usp102 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.07c","synonyms":[{"name":"Spom972h-usp102","type":"exact"},{"name":"U1 snRNP protein usp102 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74968"}


id: PBO:0038314
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_initial_curator_email","termid":"PBO:0038314"}


id: GO:0002452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of replacing receptors on B cells, in which RAG gene expression allows continued light-chain gene rearrangement and expression of a new light change which combines with the previous heavy chain to form a new receptor.","definition_xrefs":["ISBN:0781735149","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic recombination of immunoglobulin gene segments","termid":"GO:0016447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0010467","GO:0006310","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"B cell receptor editing","synonyms":[{"name":"B lymphocyte receptor editing","type":"exact"},{"name":"B-cell receptor editing","type":"exact"},{"name":"B-lymphocyte receptor editing","type":"exact"}],"termid":"GO:0002452"}


id: GO:0140991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cytoplasmic post-transcriptional gene silencing pathway in which piRNAs direct the cleavage of target mRNAs. The target mRNA, often transcribed from a transposable element, is destabilized by the activity of a PIWI class endonuclease within the piRNA-induced silencing complex. This may also be accompanied by mRNA deadenylation and decapping.","definition_xrefs":["PMID:29281264","PMID:33419460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA-mediated post-transcriptional gene silencing","termid":"GO:0035194"},{"relation_name":"is_a","term_name":"mRNA destabilization","termid":"GO:0061157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"piRNA-mediated gene silencing by mRNA destabilization","termid":"GO:0140991"}


id: GO:0021711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroblasts acquire specialized structural and/or functional features that characterize the mature unipolar brush cell in the cerebellum. Differentiation includes the processes involved in commitment of a neuroblast to a unipolar brush cell fate. A unipolar brush cell is a glutamatergic interneuron found in the cerebellar cortex.","definition_xrefs":["GOC:jid","PMID:15157725","GOC:dgh","GOC:cls","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in hindbrain","termid":"GO:0021533"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"part_of","term_name":"cerebellar granular layer formation","termid":"GO:0021684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar unipolar brush cell differentiation","termid":"GO:0021711"}


id: PBO:0054794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2208","termid":"PBO:0054794"}


id: PBO:0056195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member A6","termid":"PBO:0056195"}


id: GO:0071778
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A SWI/SNF-type complex that directly interacts with the vitamin D receptor (VDR) through the Williams syndrome transcription factor (WSTF), and mediates the recruitment of unliganded VDR to VDR target sites in promoters. The WINAC complex contains at least 13 subunits, including WSTF, several SWI/SNF components, and DNA replication-related factors.","definition_xrefs":["PMID:12837248","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete WINAC complex (obsolete GO:0071778)","synonyms":[{"name":"WINAC complex","type":"exact"}],"termid":"GO:0071778"}


id: GO:0061875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates stops, prevents, or reduces the frequency, rate or extent of hepatic stellate cell contraction.","definition_xrefs":["PMID:24204762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of hepatic stellate cell contraction","termid":"GO:0061873"},{"relation_name":"negatively_regulates","term_name":"hepatic stellate cell contraction","termid":"GO:0061872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hepatic stellate cell contraction","termid":"GO:0061875"}


id: GO:1904417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of xenophagy.","definition_xrefs":["GO_REF:0000058","PMID:21617041","GOC:pad","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macroautophagy","termid":"GO:0016239"},{"relation_name":"is_a","term_name":"positive regulation of defense response","termid":"GO:0031349"},{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"is_a","term_name":"regulation of xenophagy","termid":"GO:1904415"},{"relation_name":"positively_regulates","term_name":"xenophagy","termid":"GO:0098792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"positive regulation of xenophagy","synonyms":[{"name":"activation of xenophagy","type":"narrow"},{"name":"up regulation of xenophagy","type":"exact"},{"name":"up-regulation of xenophagy","type":"exact"},{"name":"upregulation of xenophagy","type":"exact"}],"termid":"GO:1904417"}


id: PBO:0073942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 18 member B1","termid":"PBO:0073942"}


id: GO:2000209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anoikis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"regulates","term_name":"anoikis","termid":"GO:0043276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of anoikis","synonyms":[{"name":"regulation of detachment induced cell death","type":"exact"},{"name":"regulation of suspension induced apoptosis","type":"exact"}],"termid":"GO:2000209"}


id: PR:000044705
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.3, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe) whose methylation type is trimethylation. Example: UniProtKB:P10651-1, 2-136, Lys-10, MOD:00083.","definition_xrefs":["PRO:DAN","PMID:23849629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hht3/Me(K9)","termid":"PR:000027604"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3, initiator methionine removed K9-trimethylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"Spom-hht3/InitMet-/K9me3","type":"exact"}],"termid":"PR:000044705"}


id: GO:0060209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The estrous cycle phase in which a female is sexually receptive.","definition_xrefs":["ISBN:0721662544","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"estrous cycle phase","termid":"GO:0060206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"estrus","synonyms":[{"name":"oestrus","type":"exact"}],"termid":"GO:0060209"}


id: MONDO:0014853
data:
  {"annotated_genes":["SJAG_02348"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85123],"is_not":false,"summary":null,"term":"MONDO:0014853"}]},"cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the MCM2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02348":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 70","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110592","OMIM:616968","UMLS:C4310775","MEDGEN:934742","GARD:18145"],"synonyms":[{"name":"DFNA70","type":"narrow"},{"name":"MCM2 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 70","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 70","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in MCM2","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 70","type":"narrow"},{"name":"autosomal dominant nonsyndromic hearing loss 70","type":"exact"},{"name":"deafness, autosomal dominant 70","type":"narrow"},{"name":"deafness, autosomal dominant type 70","type":"narrow"}],"termid":"MONDO:0014853","terms_by_termid":{"MONDO:0014853":null},"xrefs":{"Monarch":{"xref_id":"0014853"}}}


id: MONDO:0958018
data:
  {"annotated_genes":["SJAG_03144"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85585],"is_not":false,"summary":null,"term":"MONDO:0958018"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03144":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukodystrophy, hypomyelinating, 27","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620675","UMLS:C5882743","MEDGEN:1844996"],"termid":"MONDO:0958018","terms_by_termid":{"MONDO:0958018":null},"xrefs":{"Monarch":{"xref_id":"0958018"}}}


id: GO:0019927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cross-linking of a cysteine residue to tryptophyl quinone to form 4'-(S-L-cysteinyl)-L-tryptophyl quinone, a cofactor found at the active site of amine dehydrogenase.","definition_xrefs":["RESID:AA0313","PMID:11555656","PDB:1JJU","PMID:11717396"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 4'-(S-L-cysteinyl)-L-tryptophyl quinone (obsolete GO:0019927)","termid":"GO:0019927"}


id: MONDO:0014757
data:
  {"annotated_genes":["SJAG_04509"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85392],"is_not":false,"summary":null,"term":"MONDO:0014757"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital hematological disorder","termid":"MONDO:0009332"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"syndromic constitutional thrombocytopenia","termid":"MONDO:0018795"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"macrothrombocytopenia-lymphedema-developmental delay-facial dysmorphism-camptodactyly syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:487796","UMLS:C4225222","NANDO:2200985","GARD:17884","MEDGEN:906646","OMIM:616737"],"synonyms":[{"name":"TAKENOUCHI-Kosaki syndrome","type":"related"},{"name":"TKS","type":"related"},{"name":"Takenouchi-Kosaki syndrome","type":"exact"},{"name":"macrothrombocytopenia and intellectual disability syndrome","type":"related"},{"name":"macrothrombocytopenia and mental retardation syndrome","type":"related"}],"termid":"MONDO:0014757","terms_by_termid":{"MONDO:0014757":null},"xrefs":{"Monarch":{"xref_id":"0014757"}}}


id: MONDO:0003284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign smooth muscle neoplasm arising from the mediastium. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"},{"relation_name":"is_a","term_name":"benign neoplasm of mediastinum","termid":"MONDO:0021521"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediastinum leiomyoma","secondary_identifiers":["MEDGEN:277350","NCIT:C6598","DOID:5123","UMLS:C1334659"],"synonyms":[{"name":"leiomyoma of mediastinum","type":"exact"},{"name":"leiomyoma of the mediastinum","type":"exact"},{"name":"mediastinal leiomyoma","type":"exact"},{"name":"mediastinum leiomyoma","type":"exact"}],"termid":"MONDO:0003284","xrefs":{"Monarch":{"xref_id":"0003284"}}}


id: PR:O13813
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tom22 gene.","definition_xrefs":["UniProtKB:O13813","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import receptor subunit tom22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.16","synonyms":[{"name":"Spom972h-tom22","type":"exact"},{"name":"mitochondrial 22 kDa outer membrane protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"translocase of outer membrane 22 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13813"}


id: GO:0050298
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dihydroxy-L-phenylalanine + O2 = 5-(L-alanin-3-yl)-2-hydroxy-cis,cis-muconate 6-semialdehyde.","definition_xrefs":["EC:1.13.11.30","MetaCyc:STIZOLOBINATE-SYNTHASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"stizolobinate synthase activity","secondary_identifiers":["RHEA:18465"],"synonyms":[{"name":"3,4-dihydroxy-L-phenylalanine:oxygen 2,3-oxidoreductase (recyclizing)","type":"related"}],"termid":"GO:0050298"}


id: GO:1990797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The controlled release of cholecystokinin from a cell. Cholecystokinin is a peptide hormone that participates in pancreatic enzyme release in the gut and is also found in the brain.","definition_xrefs":["PMID:2755938"],"gene_count":0,"genotype_count":0,"name":"obsolete cholecystokinin secretion (obsolete GO:1990797)","synonyms":[{"name":"CCK secretion","type":"exact"}],"termid":"GO:1990797"}


id: PBO:0070764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L11","termid":"PBO:0070764"}


id: PBO:0031058
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_spores_and_divided_germinated_spores_(obsolete_FYPO:0000319)","termid":"PBO:0031058"}


id: PBO:0086137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for mismatch repair in mitosis and meiosis; also required for crossing over during meiosis; forms a complex with Pms1p and Msh2p-Msh3p during mismatch repair; required for silencing at the silent mating-type loci and telomeres; human homolog is associated with hereditary non-polyposis colon cancer","termid":"PBO:0086137"}


id: PBO:0087524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of ISW2/yCHRAC chromatin accessibility complex; ISW2/yCHRAC also includes Itc1p, Isw2p, and Dpb4p; involved in inheritance of telomeric silencing; DLS1 has a paralog, DPB3, that arose from the whole genome duplication","termid":"PBO:0087524"}


id: PBO:0081906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 863, pseudogene","termid":"PBO:0081906"}


id: GO:1900092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of raffinose biosynthetic process.","definition_xrefs":["PMID:22307851","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of raffinose biosynthetic process","termid":"GO:1900091"},{"relation_name":"negatively_regulates","term_name":"raffinose biosynthetic process","termid":"GO:0033529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of raffinose biosynthetic process","synonyms":[{"name":"down regulation of raffinose anabolism","type":"exact"},{"name":"down regulation of raffinose biosynthesis","type":"exact"},{"name":"down regulation of raffinose biosynthetic process","type":"exact"},{"name":"down regulation of raffinose formation","type":"exact"},{"name":"down regulation of raffinose synthesis","type":"exact"},{"name":"down-regulation of raffinose anabolism","type":"exact"},{"name":"down-regulation of raffinose biosynthesis","type":"exact"},{"name":"down-regulation of raffinose biosynthetic process","type":"exact"},{"name":"down-regulation of raffinose formation","type":"exact"},{"name":"down-regulation of raffinose synthesis","type":"exact"},{"name":"downregulation of raffinose anabolism","type":"exact"},{"name":"downregulation of raffinose biosynthesis","type":"exact"},{"name":"downregulation of raffinose biosynthetic process","type":"exact"},{"name":"downregulation of raffinose formation","type":"exact"},{"name":"downregulation of raffinose synthesis","type":"exact"},{"name":"inhibition of raffinose anabolism","type":"exact"},{"name":"inhibition of raffinose biosynthesis","type":"exact"},{"name":"inhibition of raffinose biosynthetic process","type":"narrow"},{"name":"inhibition of raffinose formation","type":"exact"},{"name":"inhibition of raffinose synthesis","type":"exact"},{"name":"negative regulation of raffinose anabolism","type":"exact"},{"name":"negative regulation of raffinose biosynthesis","type":"exact"},{"name":"negative regulation of raffinose formation","type":"exact"},{"name":"negative regulation of raffinose synthesis","type":"exact"}],"termid":"GO:1900092"}


id: PBO:0054324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1717","termid":"PBO:0054324"}


id: MONDO:0012926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amelogenesis imperfecta in which the cause of the disease is a mutation in the MMP20 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta type 2","termid":"MONDO:0015048"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta hypomaturation type 2A2","secondary_identifiers":["UMLS:C2675858","DOID:0110060","MEDGEN:436540","OMIM:612529","GARD:15563","MESH:C567279"],"synonyms":[{"name":"AI2A2","type":"exact"},{"name":"MMP20 amelogenesis imperfecta","type":"exact"},{"name":"amelogenesis imperfecta caused by mutation in MMP20","type":"exact"},{"name":"amelogenesis imperfecta hypomaturation type IIA2","type":"exact"},{"name":"amelogenesis imperfecta pigmented hypomaturation type 2","type":"exact"},{"name":"amelogenesis imperfecta type IIA2","type":"exact"},{"name":"amelogenesis imperfecta, hypomaturation type, IIA2","type":"related"},{"name":"amelogenesis imperfecta, pigmented hypomaturation type, 2","type":"related"},{"name":"amelogenesis imperfecta, type IIA2","type":"exact"}],"termid":"MONDO:0012926","xrefs":{"Monarch":{"xref_id":"0012926"}}}


id: MONDO:0012133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lateral semicircular canal malformation, familial, with external and middle ear abnormalities","secondary_identifiers":["MESH:C537879","UMLS:C1837314","OMIM:608814","MEDGEN:373305"],"synonyms":[{"name":"lateral semicircular canal malformation, familial, with external and middle ear abnormalities","type":"exact"}],"termid":"MONDO:0012133","xrefs":{"Monarch":{"xref_id":"0012133"}}}


id: PBO:0048207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit epsilon","termid":"PBO:0048207"}


id: PBO:0048720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin pseudogene 3","termid":"PBO:0048720"}


id: PBO:0062603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily P member 1","termid":"PBO:0062603"}


id: PBO:0028812
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_kinase_activity","termid":"PBO:0028812"}


id: GO:0000121
data:
  {"annotated_genes":["SJAG_04964"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99761],"is_not":false,"summary":null,"term":"GO:0000121"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + sn-glycerol 1-phosphate = glycerol + phosphate.","definition_xrefs":["RHEA:46084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"glycerol-1-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"alpha-glycerol phosphatase activity","type":"related"},{"name":"alpha-glycerophosphatase activity","type":"related"},{"name":"glycerol 3-phosphatase activity","type":"related"},{"name":"glycerol 3-phosphate phosphohydrolase activity","type":"related"},{"name":"glycerol-1-phosphate phosphohydrolase activity","type":"related"},{"name":"glycerol-3-phosphate phosphatase activity","type":"related"}],"termid":"GO:0000121","terms_by_termid":{"GO:0000121":null}}


id: PBO:0072329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 15","termid":"PBO:0072329"}


id: GO:0008237
data:
  {"annotated_genes":["SJAG_03009","SJAG_02900","SJAG_00406","SJAG_01281","SJAG_01179","SJAG_03648","SJAG_01321","SJAG_03586","SJAG_04651","SJAG_03407","SJAG_00720","SJAG_00662","SJAG_00479","SJAG_00181","SJAG_03393","SJAG_01542","SJAG_00451","SJAG_03752","SJAG_00546","SJAG_03147","SJAG_03744","SJAG_02397","SJAG_04641","SJAG_03429","SJAG_00969","SJAG_01430","SJAG_00764","SJAG_03022","SJAG_01896","SJAG_00742","SJAG_02033","SJAG_04533","SJAG_02809","SJAG_03396","SJAG_00795","SJAG_01528","SJAG_04215","SJAG_00573","SJAG_02503","SJAG_04497","SJAG_03686","SJAG_00762","SJAG_02419","SJAG_06636","SJAG_04858","SJAG_01088","SJAG_00730","SJAG_02244","SJAG_04514","SJAG_01838","SJAG_02341","SJAG_01816","SJAG_04103","SJAG_01312","SJAG_01004"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89117,97511,98312,99601,106462,110191,114145,114654],"is_not":false,"summary":null,"term":"GO:0008237"},{"annotations":[95887,96031,105296,111255,114310,99371,104114,105132,91125,93625,87969,94784,114666,109829,114738,115452,113120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140492"},{"annotations":[109536,102791,92876,97335,87977,105251,87722,113949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070006"},{"annotations":[73772,93954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004181"},{"annotations":[96232,101763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070573"},{"annotations":[89043,89727,97813,112685,96821,100586,105078,107564,101713,116151,100545,91793,118235,108687,110487,96831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004222"},{"annotations":[113704,115694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008235"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activity","termid":"GO:0008233"}],"gene_count":55,"genes_by_uniquename":{"SJAG_00181":null,"SJAG_00406":null,"SJAG_00451":null,"SJAG_00479":null,"SJAG_00546":null,"SJAG_00573":null,"SJAG_00662":null,"SJAG_00720":null,"SJAG_00730":null,"SJAG_00742":null,"SJAG_00762":null,"SJAG_00764":null,"SJAG_00795":null,"SJAG_00969":null,"SJAG_01004":null,"SJAG_01088":null,"SJAG_01179":null,"SJAG_01281":null,"SJAG_01312":null,"SJAG_01321":null,"SJAG_01430":null,"SJAG_01528":null,"SJAG_01542":null,"SJAG_01816":null,"SJAG_01838":null,"SJAG_01896":null,"SJAG_02033":null,"SJAG_02244":null,"SJAG_02341":null,"SJAG_02397":null,"SJAG_02419":null,"SJAG_02503":null,"SJAG_02809":null,"SJAG_02900":null,"SJAG_03009":null,"SJAG_03022":null,"SJAG_03147":null,"SJAG_03393":null,"SJAG_03396":null,"SJAG_03407":null,"SJAG_03429":null,"SJAG_03586":null,"SJAG_03648":null,"SJAG_03686":null,"SJAG_03744":null,"SJAG_03752":null,"SJAG_04103":null,"SJAG_04215":null,"SJAG_04497":null,"SJAG_04514":null,"SJAG_04533":null,"SJAG_04641":null,"SJAG_04651":null,"SJAG_04858":null,"SJAG_06636":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0008233","GO:0140096","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"metallopeptidase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-157632","Reactome:R-HSA-2220944","Reactome:R-HSA-2220976","Reactome:R-HSA-5211356","Reactome:R-HSA-9604264","Reactome:R-HSA-9662837","Reactome:R-HSA-2022368","Reactome:R-HSA-2022396","Reactome:R-HSA-2730752","Reactome:R-HSA-193679","Reactome:R-HSA-2022399","Reactome:R-HSA-5211400","Reactome:R-HSA-3928660","Reactome:R-HSA-5211340","Reactome:R-HSA-5211387","Reactome:R-HSA-5211405","Reactome:R-HSA-157629","Reactome:R-HSA-5211391","Reactome:R-HSA-8986181","Reactome:R-HSA-9759522","Reactome:R-HSA-9013284","Reactome:R-HSA-2666278","Reactome:R-HSA-2022393"],"synonyms":[{"name":"metalloprotease activity","type":"narrow"},{"name":"metalloproteinase activity","type":"narrow"}],"termid":"GO:0008237","terms_by_termid":{"GO:0004181":null,"GO:0004222":null,"GO:0008235":null,"GO:0008237":null,"GO:0070006":null,"GO:0070573":null,"GO:0140492":null}}


id: MONDO:0005708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A febrile illness characterized by chills, aches, vomiting, leukopenia, and sometimes encephalitis. It is caused by the colorado tick fever virus, a reovirus transmitted by the tick Dermacentor andersoni.","definition_xrefs":["MESH:D003121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral encephalitis","termid":"MONDO:0006009"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Colorado tick fever","secondary_identifiers":["ICD9:066.1","MedDRA:10010022","GARD:19042","icd11.foundation:951357413","NORD:989","Orphanet:83595","UMLS:C0009400","MEDGEN:40398","ICD10CM:A93.2","DOID:4885","SCTID:6452009"],"synonyms":[{"name":"American mountain fever","type":"exact"},{"name":"Colorado tick encephalitis","type":"exact"},{"name":"Colorado tick fever virus caused disease or disorder","type":"exact"},{"name":"Colorado tick fever virus disease or disorder","type":"exact"},{"name":"Colorado tick fever virus infectious disease","type":"exact"},{"name":"Colorado tick-borne disease","type":"exact"},{"name":"Mountain fever","type":"exact"},{"name":"Mountain tick fever","type":"exact"},{"name":"Tick fever, American mountain","type":"exact"}],"termid":"MONDO:0005708","xrefs":{"Monarch":{"xref_id":"0005708"}}}


id: MONDO:1010214
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-hodgkin lymphoma that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma, non-human animal","termid":"MONDO:0700102"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-hodgkin lymphoma, non-human animal","secondary_identifiers":["OMIA:001708"],"termid":"MONDO:1010214","xrefs":{"Monarch":{"xref_id":"1010214"}}}


id: PBO:0090876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-5 family plus-end directed microtubule motor, bimC subfamily Cut7","termid":"PBO:0090876"}


id: PBO:0077052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THRB intronic transcript 1","termid":"PBO:0077052"}


id: PBO:0046814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor XIII B chain","termid":"PBO:0046814"}


id: PBO:0075658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spectrin beta, erythrocytic","termid":"PBO:0075658"}


id: PBO:0090695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp14","termid":"PBO:0090695"}


id: PBO:0000448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF complex subunit Snf5","termid":"PBO:0000448"}


id: MONDO:0000499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anterior ischemic optic neuropathy","termid":"MONDO:0006649"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-arteritic anterior ischemic optic neuropathy","secondary_identifiers":["MEDGEN:338887","DOID:0050864","Orphanet:415300","UMLS:C1852242","icd11.foundation:8640162"],"synonyms":[{"name":"NAION","type":"exact"},{"name":"non-arteritic aion","type":"exact"},{"name":"nonarteritic anterior ischaemic optic neuropathy","type":"exact"},{"name":"nonarteritic anterior ischemic optic neuropathy","type":"exact"}],"termid":"MONDO:0000499","xrefs":{"Monarch":{"xref_id":"0000499"}}}


id: GO:0031131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which one cell or group of cells receives, transduces, and responds to a signal generated by another cell or group of cells of different ancestry and developmental potential, such that the recipient cell(s) undergo a developmental change.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete reception of an inductive signal (obsolete GO:0031131)","termid":"GO:0031131"}


id: PBO:0053046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARP4B divergent transcript","termid":"PBO:0053046"}


id: FYPO:0006015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell has more than one septum, and forms a mating projection.","definition_xrefs":["PomBase:mah","PMID:28410370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiseptate cell","termid":"FYPO:0004295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"multiseptate cell with shmoo","synonyms":[{"name":"large non-mated cells","type":"related"},{"name":"multiseptate shmooing cell","type":"exact"}],"termid":"FYPO:0006015"}


id: GO:0034895
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pryidine-3,4-diol + O2 = 3-(N-formyl)-formiminopyruvate.","definition_xrefs":["UM-BBD_reactionID:r1398"],"gene_count":0,"genotype_count":0,"name":"obsolete pyridine-3,4-diol dioxygenase activity (obsolete GO:0034895)","termid":"GO:0034895"}


id: PBO:0063359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Purkinje cell protein 4 like 1","termid":"PBO:0063359"}


id: PBO:0003858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GINS complex subunit Psf1","termid":"PBO:0003858"}


id: PBO:0090597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-GATA-type","termid":"PBO:0090597"}


id: PBO:0038551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABHD17A pseudogene 6","termid":"PBO:0038551"}


id: GO:0006489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dolichyl diphosphate, a diphosphorylated dolichol derivative.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"dolichyl diphosphate metabolic process","termid":"GO:0046465"},{"relation_name":"part_of","term_name":"dolichol-linked oligosaccharide biosynthetic process","termid":"GO:0006488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"part_of","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0006486"],"is_obsolete":false,"name":"dolichyl diphosphate biosynthetic process","secondary_identifiers":["Reactome:R-HSA-446199"],"synonyms":[{"name":"dolichyl diphosphate anabolism","type":"exact"},{"name":"dolichyl diphosphate biosynthesis","type":"exact"},{"name":"dolichyl diphosphate formation","type":"exact"},{"name":"dolichyl diphosphate synthesis","type":"exact"}],"termid":"GO:0006489"}


id: PBO:0016974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mcp3","termid":"PBO:0016974"}


id: MONDO:0000225
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of ehrlichiosis associated with Ehrlichia chaffeensis, an obligate intracellular pathogen affecting monocytes and macrophages.","definition_xrefs":["Wikipedia:Human_monocytotropic_ehrlichiosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte disorder","termid":"MONDO:0004805"},{"relation_name":"is_a","term_name":"ehrlichiosis","termid":"MONDO:0016003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"human monocytic ehrlichiosis","secondary_identifiers":["SCTID:359747000","GARD:72","DOID:0050026","MEDGEN:1826179","UMLS:C3844799","ICD9:082.41","NORD:1254"],"synonyms":[{"name":"HME","type":"related"},{"name":"Human Monocytic Ehrlichiosis (HME)","type":"exact"},{"name":"Human ehrlichial infection, human monocytic type","type":"related"},{"name":"ehrlichiosis chafeensis","type":"related"},{"name":"human ehrlichiosis caused by Ehrlichia chaffeensis","type":"related"},{"name":"human ehrlichiosis due to Ehrlichia chaffeensis","type":"exact"}],"termid":"MONDO:0000225","xrefs":{"Monarch":{"xref_id":"0000225"}}}


id: PBO:0044063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin 9","termid":"PBO:0044063"}


id: PBO:0078258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable A/OR9-2 (pseudogene)","termid":"PBO:0078258"}


id: GO:0030950
data:
  {"annotated_genes":["SJAG_00661","SJAG_00030","SJAG_00152","SJAG_04461","SJAG_02392","SJAG_00424","SJAG_02838","SJAG_03748"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87943,88912,95335,98825,99669,104146,104847,110252],"is_not":false,"summary":null,"term":"GO:0030950"}]},"cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of polarized actin-based cytoskeletal structures.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin cytoskeleton organization","termid":"GO:0030036"},{"relation_name":"is_a","term_name":"establishment or maintenance of cytoskeleton polarity","termid":"GO:0030952"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00152":null,"SJAG_00424":null,"SJAG_00661":null,"SJAG_02392":null,"SJAG_02838":null,"SJAG_03748":null,"SJAG_04461":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0007163","GO:0030036"],"is_obsolete":false,"name":"establishment or maintenance of actin cytoskeleton polarity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030950","terms_by_termid":{"GO:0030950":null}}


id: GO:0012501
data:
  {"annotated_genes":["SJAG_00737","SJAG_03258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79057,73426],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0043065"}]},"cv_name":"biological_process","definition":"A process which begins when a cell receives an internal or external signal and activates a series of biochemical events (signaling pathway). The process ends with the death of the cell.","definition_xrefs":["GOC:lr","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell death","termid":"GO:0008219"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_03258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"programmed cell death","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Wikipedia:Programmed_cell_death","GO:0016244","Reactome:R-HSA-5357801"],"synonyms":[{"name":"PCD","type":"related"},{"name":"RCD","type":"related"},{"name":"caspase-independent apoptosis","type":"related"},{"name":"caspase-independent cell death","type":"narrow"},{"name":"non-apoptotic programmed cell death","type":"narrow"},{"name":"nonapoptotic programmed cell death","type":"narrow"},{"name":"regulated cell death","type":"broad"}],"termid":"GO:0012501","terms_by_termid":{"GO:0043065":null}}


id: MONDO:1011305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cancer or benign tumor that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305","xrefs":{"Monarch":{"xref_id":"1011305"}}}


id: PBO:0078155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 33 (pseudogene)","termid":"PBO:0078155"}


id: FYPO:0000041
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize phenylalanine, and therefore requires phenylalanine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for phenylalanine","synonyms":[{"name":"growth auxotrophic for phenylalanine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for phenylalanine during vegetative growth","type":"exact"},{"name":"phenylalanine auxotrophy","type":"exact"}],"termid":"FYPO:0000041"}


id: PBO:0091178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial methionine-tRNA ligase Msm1","termid":"PBO:0091178"}


id: FYPO:0005460
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at promoters that contain MCB sites is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to chromatin at promoter","termid":"FYPO:0006349"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin at protein coding gene","termid":"FYPO:0008249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to chromatin at MCB promoters","synonyms":[{"name":"abolished protein localisation to chromatin at MCB promoters during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromatin at MCB promoters during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to chromatin at MCB target genes","type":"related"},{"name":"abolished protein localization to chromatin at MCB-containing promoters","type":"exact"},{"name":"protein localization to chromatin at MCB promoters during vegetative growth abolished","type":"exact"}],"termid":"FYPO:0005460"}


id: PATO:0002335
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being dome-shaped.","definition_xrefs":["PATOC:dd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tholiform","termid":"PATO:0002335"}


id: GO:0044075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts vacuole organization in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:25139904"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host vacuole organization","synonyms":[{"name":"modulation by symbiont of host vacuole biogenesis","type":"related"},{"name":"modulation by symbiont of host vacuole organisation","type":"exact"},{"name":"modulation by symbiont of host vacuole organization","type":"exact"},{"name":"modulation of host vacuole organization by symbiont","type":"exact"},{"name":"regulation by symbiont of host vacuole organization","type":"exact"}],"termid":"GO:0044075"}


id: PBO:0040056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 2/3 complex subunit 3 pseudogene 4","termid":"PBO:0040056"}


id: GO:0010306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of rhamnogalacturonan II, a low molecular mass (5 - 10KDa) pectic polysaccharide, conserved in the primary walls of dicotyledenous and monocotyledenous plants and gymnosperms.","definition_xrefs":["PMID:12754267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhamnogalacturonan II metabolic process","termid":"GO:0010396"},{"relation_name":"is_a","term_name":"cell wall pectin biosynthetic process","termid":"GO:0052325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0071554","GO:0005975"],"is_obsolete":false,"name":"rhamnogalacturonan II biosynthetic process","termid":"GO:0010306"}


id: PBO:0048096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 17","termid":"PBO:0048096"}


id: MONDO:0000222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of gonococcal seminal vesiculitis.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonococcal seminal vesiculitis","termid":"MONDO:0001027"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seminal vesicle acute gonorrhea","secondary_identifiers":["UMLS:C0153194","MEDGEN:509196","SCTID:65049003","DOID:0050004"],"synonyms":[{"name":"acute gonococcal seminal vesiculitis","type":"exact"},{"name":"gonococcal seminal vesiculitis, acute","type":"exact"}],"termid":"MONDO:0000222","xrefs":{"Monarch":{"xref_id":"0000222"}}}


id: GO:0016617
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxy-L-proline + NAD+ = 4-oxoproline + NADH + H+.","definition_xrefs":["EC:1.1.1.104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4-oxoproline reductase activity","secondary_identifiers":["RHEA:13601","MetaCyc:4-OXOPROLINE-REDUCTASE-RXN"],"synonyms":[{"name":"4-hydroxy-L-proline:NAD+ oxidoreductase activity","type":"related"},{"name":"hydroxy-L-proline oxidase activity","type":"exact"},{"name":"hydroxyproline oxidase activity","type":"related"}],"termid":"GO:0016617"}


id: PBO:0067320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 408, pseudogene","termid":"PBO:0067320"}


id: GO:1901701
data:
  {"annotated_genes":["SJAG_01216","SJAG_03081","SJAG_01199","SJAG_04788","SJAG_01734","SJAG_03653","SJAG_02010","SJAG_04823","SJAG_00668","SJAG_00141","SJAG_01699","SJAG_01754","SJAG_00574","SJAG_04312","SJAG_04399","SJAG_05256","SJAG_00472","SJAG_05181","SJAG_06611","SJAG_01457","SJAG_03303","SJAG_04953","SJAG_04403","SJAG_01254","SJAG_01162","SJAG_02960","SJAG_02515","SJAG_04026","SJAG_02444","SJAG_04632"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101346,109008,93713,108500,106333,105395,105984,115027,116058],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"},{"annotations":[112223],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110095"},{"annotations":[108320,99497,94678,116866,117787,104534],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"},{"annotations":[104537],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140041"},{"annotations":[112997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071244"},{"annotations":[104716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036245"},{"annotations":[99498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034614"},{"annotations":[95020,102978],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0046294"},{"annotations":[64688,99654,57887,98774,92616,88880,109627,68142,109583,88458],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an oxygen-containing compound stimulus.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00472":null,"SJAG_00574":null,"SJAG_00668":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01254":null,"SJAG_01457":null,"SJAG_01699":null,"SJAG_01734":null,"SJAG_01754":null,"SJAG_02010":null,"SJAG_02444":null,"SJAG_02515":null,"SJAG_02960":null,"SJAG_03081":null,"SJAG_03303":null,"SJAG_03653":null,"SJAG_04026":null,"SJAG_04312":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null,"SJAG_05256":null,"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to oxygen-containing compound","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"cellular response to oxygen molecular entity","type":"exact"}],"termid":"GO:1901701","terms_by_termid":{"GO:0010619":null,"GO:0019430":null,"GO:0034614":null,"GO:0036245":null,"GO:0046294":null,"GO:0061692":null,"GO:0071244":null,"GO:0110095":null,"GO:0140041":null}}


id: PBO:0090015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase Plb2","termid":"PBO:0090015"}


id: FYPO:0003508
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing mercury ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002057","FYPO:0000003","FYPO:0000139","FYPO:0002060","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on mercury","synonyms":[{"name":"normal cell population growth in presence of mercury","type":"exact"},{"name":"normal cell population growth on mercury","type":"exact"},{"name":"normal cell population growth on mercury ion","type":"exact"},{"name":"normal cellular response to mercury","type":"related"},{"name":"normal growth on mercury ions","type":"exact"},{"name":"normal vegetative cell population growth on mercury","type":"exact"}],"termid":"FYPO:0003508"}


id: GO:0071673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of smooth muscle cell chemotaxis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smooth muscle cell migration","termid":"GO:0014911"},{"relation_name":"is_a","term_name":"positive regulation of chemotaxis","termid":"GO:0050921"},{"relation_name":"is_a","term_name":"regulation of smooth muscle cell chemotaxis","termid":"GO:0071671"},{"relation_name":"positively_regulates","term_name":"smooth muscle cell chemotaxis","termid":"GO:0071670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of smooth muscle cell chemotaxis","synonyms":[{"name":"activation of smooth muscle cell chemotaxis","type":"narrow"},{"name":"stimulation of smooth muscle cell chemotaxis","type":"narrow"},{"name":"up regulation of smooth muscle cell chemotaxis","type":"exact"},{"name":"up-regulation of smooth muscle cell chemotaxis","type":"exact"},{"name":"upregulation of smooth muscle cell chemotaxis","type":"exact"}],"termid":"GO:0071673"}


id: PBO:0091386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b translation regulator Cbp8","termid":"PBO:0091386"}


id: SO:0001293
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5-formyl-2'-O-methylcytidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_formyl_two_prime_O_methylcytidine","secondary_identifiers":["RNAMOD:095"],"synonyms":[{"name":"5-formyl-2'-O-methylcytidine","type":"exact"},{"name":"f5Cm","type":"exact"},{"name":"five formyl two prime O methylcytidine","type":"exact"}],"termid":"SO:0001293"}


id: PBO:0060797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit S5 pseudogene 3","termid":"PBO:0060797"}


id: GO:1904975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bleomycin stimulus.","definition_xrefs":["PMID:11553781","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to bleomycin","termid":"GO:1904975"}


id: PBO:0033767
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_spindle_pole_body_duplication","termid":"PBO:0033767"}


id: FYECO:0000168
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells are initially grown at a high temperature. This is followed by a heat shock where the temperature is increased to a higher temperature, followed by recovery at the initial temperature.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping heat shock","termid":"FYECO:0000116"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock and recovery at high temperature","synonyms":[{"name":"heat shock for 20-30 min at 48 degrees C, preceeded and followed by growth at high temperature","type":"narrow"}],"termid":"FYECO:0000168"}


id: PBO:0114535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PX/PXA domain protein, implicated in membrane organization or lipid metabolism","termid":"PBO:0114535"}


id: MOD:00614
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a fucose (6-deoxy-D-galactose) group through a glycosidic bond.","definition_xrefs":["PubMed:11344537","PubMed:15189151","Unimod:295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyhexosylated","termid":"MOD:00736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"fucosylated","synonyms":[{"name":"Fuc","type":"exact"},{"name":"Fucose","type":"related"},{"name":"dHex","type":"related"}],"termid":"MOD:00614"}


id: GO:0160065
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex associated with the mitotic spindle pole body during interphase and mitosis and comprises of the proteins of the septation initiation signaling network (SIN) of fission yeast or mitotic exit network (MEN) of budding yeast, organized by two scaffold/adaptor proteins.","definition_xrefs":["PMID:22684255","PMID:21131906","PMID:22525225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"outer plaque of mitotic spindle pole body","termid":"GO:0061499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005816"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0015630","GO:0005816"],"is_obsolete":false,"name":"SIN/MEN signaling complex","synonyms":[{"name":"Hippo signaling complex","type":"narrow"},{"name":"MEN signaling complex","type":"narrow"},{"name":"SIN signaling complex","type":"narrow"},{"name":"SIN/MEN signalling complex","type":"exact"}],"termid":"GO:0160065"}


id: SOFP:synonym
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"Historic community symbol, may have originally been symbol","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synonym","termid":"SOFP:synonym"}


id: GO:0031474
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myosin complex containing one or more class IV myosin heavy chains and associated light chains; myosin IV is relatively uncharacterized, but is predicted to have a single motor domain, one IQ motif and a tail with a Myosin Tail Homology (myTH4) domain homologous to that in the tails of myosins VII and XV.","definition_xrefs":["Wikipedia:Myosin"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0015629","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"myosin IV complex","termid":"GO:0031474"}


id: PBO:0004018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-amino-4-deoxychorismate lyase (predicted)","termid":"PBO:0004018"}


id: GO:0022010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of oligodendrocytes in the central nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier.","definition_xrefs":["GOC:dph","GOC:cls","GO_REF:0000021","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon ensheathment in central nervous system","termid":"GO:0032291"},{"relation_name":"is_a","term_name":"myelination","termid":"GO:0042552"},{"relation_name":"part_of","term_name":"oligodendrocyte development","termid":"GO:0014003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central nervous system myelination","synonyms":[{"name":"myelination in central nervous system","type":"exact"}],"termid":"GO:0022010"}


id: FYPO:0006477
data:
  {"alleles_by_uniquename":{"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118928,118832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"},{"annotations":[118648,118650,118649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000324"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the metaphase/anaphase transition of the mitotic cell cycle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle phase transition","termid":"FYPO:0005275"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01330":null,"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":4,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic metaphase/anaphase transition","references_by_uniquename":{"PMID:21802294":null,"PMID:23786411":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03575","SJAG_03351","SJAG_01330","SJAG_01956"],"single_locus_genotype_uniquenames":["mad2delta","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal cell cycle passage through mitotic metaphase-anaphase transition","type":"exact"},{"name":"abnormal cell cycle progression through the metaphase/anaphase transition","type":"exact"},{"name":"abnormal metaphase/anaphase transition during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle metaphase/anaphase transition","type":"exact"},{"name":"abnormal mitotic metaphase/anaphase cell cycle phase transition","type":"exact"},{"name":"abnormal mitotic metaphase/anaphase transition during vegetative growth","type":"exact"},{"name":"abnormal onset of mitotic anaphase","type":"related"}],"termid":"FYPO:0006477","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000324":null,"FYPO:0004318":null}}


id: SO:0000724
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a DNA molecule where transfer is initiated during the process of conjugation or mobilization.","direct_ancestors":[{"relation_name":"is_a","term_name":"origin_of_replication","termid":"SO:0000296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oriT","secondary_identifiers":["http://en.wikipedia.org/wiki/Origin_of_transfer"],"synonyms":[{"name":"INSDC_feature:oriT","type":"exact"},{"name":"origin of transfer","type":"exact"}],"termid":"SO:0000724"}


id: PBO:0027716
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nucleosome_occupancy","termid":"PBO:0027716"}


id: PBO:0057732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1307","termid":"PBO:0057732"}


id: PBO:0089464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seven transmembrane receptor protein","termid":"PBO:0089464"}


id: MONDO:0021720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fetal alcohol spectrum disorders (obsolete MONDO:0021720)","termid":"MONDO:0021720","xrefs":{"Monarch":{"xref_id":"0021720"}}}


id: PBO:0000456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Nrd1","termid":"PBO:0000456"}


id: MONDO:0018393
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Male infertility with azoospermia or oligospermia due to single gene mutation is a rare, genetic male infertility due to sperm disorder characterized by the absence of a measurable amount of spermatozoa in the ejaculate (azoospermia), or a number of sperm in the ejaculate inferior to 15 million/mL (oligozoospermia), resulting from a mutation in a single gene known to cause azoo- or oligo-spermia. Sperm morphology may be normal.","definition_xrefs":["Orphanet:399805"],"gene_count":0,"genotype_count":0,"name":"obsolete male infertility with azoospermia or oligozoospermia due to single gene mutation (obsolete MONDO:0018393)","termid":"MONDO:0018393","xrefs":{"Monarch":{"xref_id":"0018393"}}}


id: PBO:0060043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 31","termid":"PBO:0060043"}


id: GO:0003056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of vascular smooth muscle contraction.","definition_xrefs":["GOC:mtg_cardio","GOC:mtg_sensu","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle contraction","termid":"GO:0006940"},{"relation_name":"is_a","term_name":"regulation of vasoconstriction","termid":"GO:0019229"},{"relation_name":"regulates","term_name":"vascular associated smooth muscle contraction","termid":"GO:0014829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular associated smooth muscle contraction","synonyms":[{"name":"regulation of vascular smooth muscle contraction","type":"exact"}],"termid":"GO:0003056"}


id: PBO:0045783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EDAR associated via death domain","termid":"PBO:0045783"}


id: MONDO:0859215
data:
  {"annotated_genes":["SJAG_MIT09"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85579],"is_not":false,"summary":null,"term":"MONDO:0859215"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_MIT09":null},"genotype_count":0,"is_obsolete":false,"name":"dystonia, early-onset, and/or spastic paraplegia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5562051","DOID:0070445","OMIM:619681","MEDGEN:1794261"],"termid":"MONDO:0859215","terms_by_termid":{"MONDO:0859215":null},"xrefs":{"Monarch":{"xref_id":"0859215"}}}


id: PATO:0001246
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of brown hue and high brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brown","termid":"PATO:0000952"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light brown","termid":"PATO:0001246"}


id: PBO:0084642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microtubule-associated protein; component of the interface between microtubules and kinetochore, involved in sister chromatid separation; essential in polyploid cells but not in haploid or diploid cells; promotes plus-end directed movement of Dyn1p; ortholog of mammalian CLIP-170","termid":"PBO:0084642"}


id: PBO:0060070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 17","termid":"PBO:0060070"}


id: PBO:0062314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily W member 2","termid":"PBO:0062314"}


id: PBO:0048678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine decarboxylase pseudogene 1","termid":"PBO:0048678"}


id: PBO:0058064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4283-2","termid":"PBO:0058064"}


id: MONDO:0011538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frontoocular syndrome","secondary_identifiers":["UMLS:C1854405","MEDGEN:344278","OMIM:605321","MESH:C565340"],"synonyms":[{"name":"frontoocular syndrome","type":"exact"}],"termid":"MONDO:0011538","xrefs":{"Monarch":{"xref_id":"0011538"}}}


id: PBO:0111816
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMT family","termid":"PBO:0111816"}


id: GO:0043879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of glycolate from one side of a membrane to the other. Glycolate is the smallest alpha-hydroxy acid (AHA).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"glycolate transmembrane transporter activity","synonyms":[{"name":"glcA","type":"related"},{"name":"glycolate permease","type":"related"},{"name":"glycolic acid transmembrane transporter activity","type":"exact"},{"name":"hydroxyacetic acid transmembrane transporter activity","type":"exact"}],"termid":"GO:0043879"}


id: PR:O13877
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerases I, II, and III subunit RPABC5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23413:SF2","OMA:SCHPO02059","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerases I, II, and III subunit RPABC5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.12c","secondary_identifiers":["UniProtKB:O13877"],"synonyms":[{"name":"ABC10-beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DNA-directed RNA polymerases I, II, and III 8.3 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerases I, II, and III subunit ABC5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RPC8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR2L","type":"exact"}],"termid":"PR:O13877"}


id: PBO:0027258
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_tRNA_genes","termid":"PBO:0027258"}


id: MONDO:0100566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neonatal/infantile epilepsy syndrome that is characterized by the onset of myoclonic seizures between the ages of 6-18 months (range 4 months to 3 years). Males are twice as likely to be affected as females. Antecedent and birth history is unremarkable. Head size and neurological examination are normal. Prior development is usually normal. Cognitive, motor and behavioral difficulties are reported, especially if seizures are poorly controlled. Developmental outcome is normal in 60-85% of cases. Mild intellectual impairment and attention problems can be seen.","direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal/infantile epilepsy syndrome","termid":"MONDO:0100022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"myoclonic epilepsy in infancy","secondary_identifiers":["UMLS:C0751120","Orphanet:86909","GARD:19086","MEDGEN:148242"],"synonyms":[{"name":"MEI","type":"exact"},{"name":"benign myoclonic epilepsy of infancy","type":"exact"},{"name":"benign myoclonus epilepsy of infancy","type":"exact"}],"termid":"MONDO:0100566","xrefs":{"Monarch":{"xref_id":"0100566"}}}


id: PR:P40371
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ptc1 gene.","definition_xrefs":["UniProtKB:P40371","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2C homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4F11.02","synonyms":[{"name":"PP2C-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ptc1","type":"exact"}],"termid":"PR:P40371"}


id: PBO:0073302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 24","termid":"PBO:0073302"}


id: GO:0022855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + glucose(out) = protein histidine + glucose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"D-glucose transmembrane transporter activity","termid":"GO:0055056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-glucose phosphotransferase system transporter activity","synonyms":[{"name":"glucose PTS transporter activity","type":"exact"}],"termid":"GO:0022855"}


id: GO:0102405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-taxifolin(1-) + O2 + NADPH(4-) + H+ = (+)-dihydromyricetin + NADP(3-) + H2O.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(+)-taxifolin 5'-hydroxylase activity","secondary_identifiers":["RHEA:61116","MetaCyc:RXN-13718"],"termid":"GO:0102405"}


id: PBO:0085968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; potential Cdc28p substrate; overproduction confers resistance to methylmercury","termid":"PBO:0085968"}


id: MOD:00745
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a selenium atom or a cluster containing selenium for hydrogen atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenium containing residue","synonyms":[{"name":"SeRes","type":"exact"}],"termid":"MOD:00745"}


id: PR:Q9P6P2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrp36 gene.","definition_xrefs":["UniProtKB:Q9P6P2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA biogenesis protein rrp36 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.04","synonyms":[{"name":"Spom972h-rrp36","type":"exact"},{"name":"ribosomal RNA-processing protein 36 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6P2"}


id: PBO:0083083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DL-glycerol-3-phosphate phosphatase involved in glycerol biosynthesis; also known as glycerol-1-phosphatase; induced in response to hyperosmotic or oxidative stress, and during diauxic shift; GPP2 has a paralog, GPP1, that arose from the whole genome duplication","termid":"PBO:0083083"}


id: PBO:0027329
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_translation_of_ribosomal_proteins","termid":"PBO:0027329"}


id: FYPO:0006563
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which MBF complex assembly is abolished during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished MBF complex assembly during mitotic G1 phase","synonyms":[{"name":"MBF complex assembly abolished during mitotic G1 phase","type":"exact"},{"name":"abolished MBF complex assembly during G1 phase during vegetative growth","type":"exact"},{"name":"abolished MBF complex assembly during G1 phase of mitotic cell cycle","type":"exact"},{"name":"abolished MBF transcription complex assembly during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0006563"}


id: GO:0015993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of molecular hydrogen (H2) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete molecular hydrogen transport (obsolete GO:0015993)","termid":"GO:0015993"}


id: GO:0140797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + histone H3 L-arginyl (position 17)= histone H3 L-citrullyl (position 17) + NH4+, resulting in histone H3 citrullination at position 17.","definition_xrefs":["PMID:15339660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 arginine deiminase activity","termid":"GO:0141057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016810","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"histone H3R17 arginine deiminase activity","synonyms":[{"name":"H3-R17 citrullination","type":"exact"},{"name":"histone H3-R17 arginine deiminase activity","type":"exact"},{"name":"histone-arginine deiminase activity (H3-R17 specific)","type":"exact"}],"termid":"GO:0140797"}


id: PBO:0053587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 612","termid":"PBO:0053587"}


id: PBO:0018102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NiCoT heavy metal ion transmembrane transporter Nic1","termid":"PBO:0018102"}


id: PBO:0040504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activator of transcription and developmental regulator AUTS2","termid":"PBO:0040504"}


id: PBO:0047356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein, pseudogene","termid":"PBO:0047356"}


id: MONDO:0011932
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypotrichosis in which the cause of the disease is a mutation in the DSG4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypotrichosis","termid":"MONDO:0003037"},{"relation_name":"is_a","term_name":"hypotrichosis simplex","termid":"MONDO:0018914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis 6","secondary_identifiers":["OMIM:607903","GARD:15423","MEDGEN:335812","DOID:0110703","MESH:C564312","UMLS:C1842839"],"synonyms":[{"name":"DSG4 hypotrichosis","type":"exact"},{"name":"HYPT6","type":"exact"},{"name":"Htl","type":"related"},{"name":"LAH1","type":"exact"},{"name":"Lah1","type":"exact"},{"name":"autosomal recessive localised hypotrichosis","type":"exact"},{"name":"autosomal recessive localized hypotrichosis","type":"exact"},{"name":"hypotrichosis 6","type":"exact"},{"name":"hypotrichosis caused by mutation in DSG4","type":"exact"},{"name":"hypotrichosis type 6","type":"exact"},{"name":"hypotrichosis, localized, autosomal recessive","type":"related"},{"name":"hypotrichosis, localized, autosomal recessive 1","type":"exact"},{"name":"monilethrix-like hypotrichosis","type":"exact"}],"termid":"MONDO:0011932","xrefs":{"Monarch":{"xref_id":"0011932"}}}


id: GO:0097254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The elimination of substances from peritubular capillaries (or surrounding hemolymph in invertebrates) into the renal tubules to be incorporated subsequently into the urine. Substances that are secreted include organic anions, ammonia, potassium and drugs.","definition_xrefs":["PMID:25287933","GOC:rph","Wikipedia:Renal_secretion#Secretion"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process","termid":"GO:0003014"},{"relation_name":"is_a","term_name":"excretion","termid":"GO:0007588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal tubular secretion","termid":"GO:0097254"}


id: PBO:0090721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermidine synthase Srm1","termid":"PBO:0090721"}


id: PBO:0052760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 52","termid":"PBO:0052760"}


id: PR:O14363
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl102 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L1-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.18c","synonyms":[{"name":"L10a (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpl102","type":"exact"}],"termid":"PR:O14363"}


id: PBO:0088304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linear element protein Mug20","termid":"PBO:0088304"}


id: PBO:0081634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 562","termid":"PBO:0081634"}


id: FYPO:0003319
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell adhesion phenotype observed in the vegetative growth phase of the life cycle in which mannose-specific flocculation is increased. Mannose-specific flocculation is the non-sexual aggregation of cells, mediated via the binding of cell wall proteins on one cell to mannose residues on the other, and when it is increased cells adhere to each other more strongly or to a greater extent than normal.","definition_xrefs":["GO:0036350","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell-cell adhesion","termid":"FYPO:0005760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased mannose-specific flocculation","synonyms":[{"name":"increased cell-cell adhesion involved in mannose-specific flocculation","type":"exact"},{"name":"increased mannose-specific flocculation during mitotic cell cycle","type":"related"},{"name":"increased mannose-specific flocculation during vegetative growth","type":"exact"}],"termid":"FYPO:0003319"}


id: PBO:0110488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor kinase PRP4K","termid":"PBO:0110488"}


id: PBO:0040969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 40","termid":"PBO:0040969"}


id: PBO:0064405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic lipase related protein 3","termid":"PBO:0064405"}


id: FYPO:0002606
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a greater extent than normal at ribosomal DNA during S phase of the mitotic cell cycle. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H2A phosphorylation at rDNA during vegetative growth","termid":"FYPO:0002604"},{"relation_name":"is_a","term_name":"increased protein phosphorylation during mitotic S phase","termid":"FYPO:0004353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0002494","FYPO:0000002","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at rDNA during mitotic S phase","synonyms":[{"name":"increased histone H2A phosphorylation at rDNA during mitotic S phase during vegetative growth","type":"exact"},{"name":"increased histone H2A phosphorylation at ribosomal DNA during mitotic S phase","type":"exact"}],"termid":"FYPO:0002606"}


id: MONDO:0011436
data:
  {"annotated_genes":["SJAG_03495"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84745],"is_not":false,"summary":null,"term":"MONDO:0011436"}]},"cv_name":"mondo","definition":"Spinal muscular atrophy with respiratory distress type 1 is a rare genetic motor neuron disease characterized by severe respiratory distress/respiratory failure in association with diaphragmatic eventration and palsy, as well as progressive, symmetrical, distal-to-proximal muscle weakness and atrophy (in lower limbs especially). Patients typically have a history of intrauterine growth retardation, low birth weight, feeble cry, weak suck and failure to thrive and present with inspiratory stridor, recurrent episodes of dyspnea or apnea, cyanosis and absent deep tendon reflexes. Kyphosis/scoliosis, foot deformities and joint contractures are frequently associated features.","definition_xrefs":["Orphanet:98920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal muscular atrophy","termid":"MONDO:0001516"},{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal recessive","termid":"MONDO:0015363"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive distal spinal muscular atrophy 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:711483003","ICD9:335.19","MEDGEN:388083","NORD:1994","MESH:C536880","DOID:0111064","OMIM:604320","UMLS:C1858517","GARD:8592"],"synonyms":[{"name":"DSMA1","type":"exact"},{"name":"HMN 6","type":"related"},{"name":"HMN VI","type":"related"},{"name":"Hmn6","type":"related"},{"name":"IGHMBP2 spinal muscular atrophy","type":"exact"},{"name":"SIANRF","type":"exact"},{"name":"SMARD1","type":"exact"},{"name":"Spinal Muscular Atrophy with Respiratory Distress","type":"exact"},{"name":"autosomal recessive distal spinal muscular atrophy 1","type":"exact"},{"name":"autosomal recessive distal spinal muscular atrophy type 1","type":"exact"},{"name":"autosomal recessive spinal muscular atrophy with respiratory distress","type":"exact"},{"name":"dHMN6","type":"exact"},{"name":"dSMA1","type":"exact"},{"name":"diaphragmatic spinal muscular atrophy","type":"exact"},{"name":"distal hereditary motor neuropathy type 6","type":"exact"},{"name":"distal-HMN type 6","type":"exact"},{"name":"neuronopathy, Severe infantile axonal, with respiratory failure","type":"related"},{"name":"neuronopathy, distal hereditary motor, type 6","type":"related"},{"name":"neuronopathy, distal hereditary motor, type VI","type":"related"},{"name":"severe infantile axonal neuropathy with respiratory failure","type":"related"},{"name":"severe infantile axonal neuropathy with respiratory failure type 1","type":"exact"},{"name":"spinal muscular atrophy caused by mutation in IGHMBP2","type":"exact"},{"name":"spinal muscular atrophy with respiratory distress 1","type":"related"},{"name":"spinal muscular atrophy with respiratory distress type 1","type":"exact"},{"name":"spinal muscular atrophy, diaphragmatic","type":"related"},{"name":"spinal muscular atrophy, distal, autosomal recessive, 1","type":"related"},{"name":"spinal muscular atrophy, distal, autosomal recessive, type 1","type":"exact"}],"termid":"MONDO:0011436","terms_by_termid":{"MONDO:0011436":null},"xrefs":{"Monarch":{"xref_id":"0011436"}}}


id: GO:0103105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-oxo-6-methylthiohexanoate + a standard alpha amino acid = dihomomethionine + a 2-oxo carboxylate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-oxo-6-methylthiohexanoate aminotransferase activity (obsolete GO:0103105)","termid":"GO:0103105"}


id: MONDO:0009565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by intellectual deficit, marfanoid habitus, microcephaly, and glomerulonephritis.","definition_xrefs":["Orphanet:2172"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly-glomerulonephritis-marfanoid habitus syndrome","secondary_identifiers":["MEDGEN:343327","OMIM:248760","GARD:3615","UMLS:C1855348","MESH:C565411"],"synonyms":[{"name":"MARFANOID habitus with microcephaly and glomerulonephritis","type":"related"},{"name":"microcephaly glomerulonephritis Marfanoid habitus","type":"related"}],"termid":"MONDO:0009565","xrefs":{"Monarch":{"xref_id":"0009565"}}}


id: GO:0004032
data:
  {"annotated_genes":["SJAG_03958","SJAG_04660","SJAG_01869","SJAG_02010"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91297,94505,112224],"is_not":false,"summary":null,"term":"GO:0004032"},{"annotations":[95240,100681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032866"},{"annotations":[100682,95241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032867"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an alditol + NADP+ = an aldose + NADPH + H+.","definition_xrefs":["EC:1.1.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NADP+) activity","termid":"GO:0008106"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01869":null,"SJAG_02010":null,"SJAG_03958":null,"SJAG_04660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"aldose reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:12789","Reactome:R-HSA-5652172","Reactome:R-HSA-196060","KEGG_REACTION:R02820"],"synonyms":[{"name":"aldehyde reductase activity","type":"related"},{"name":"alditol:NADP+ 1-oxidoreductase activity","type":"exact"},{"name":"aldose reductase activity","type":"related"},{"name":"polyol dehydrogenase (NADP(+)) activity","type":"related"}],"termid":"GO:0004032","terms_by_termid":{"GO:0004032":null,"GO:0032866":null,"GO:0032867":null}}


id: MONDO:0017029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Langerhans cell histiocytosis that occurs during adulthood.","definition_xrefs":["NCIT:C114929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial lung disease specific to adulthood","termid":"MONDO:0017026"},{"relation_name":"is_a","term_name":"Langerhans cell histiocytosis","termid":"MONDO:0018310"},{"relation_name":"is_a","term_name":"lung neoplasm","termid":"MONDO:0021117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"Langerhans cell histiocytosis specific to adulthood","secondary_identifiers":["MEDGEN:859694","NANDO:2200031","Orphanet:264750","UMLS:C3900100"],"synonyms":[{"name":"Langerhans cell granulomatosis specific to adulthood","type":"exact"},{"name":"Langerhans cell histiocytosis","type":"broad"},{"name":"adult Langerhans cell histiocytosis","type":"exact"},{"name":"histiocytosis X specific to adulthood","type":"exact"}],"termid":"MONDO:0017029","xrefs":{"Monarch":{"xref_id":"0017029"}}}


id: FYECO:0000390
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which torin1 was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ torin1","synonyms":[{"name":"Torin1","type":"exact"}],"termid":"FYECO:0000390"}


id: PR:O36014
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An aspartyl aminopeptidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10761:SF2","PRO:DNx","OMA:SCHPO02005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartyl aminopeptidase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.02","secondary_identifiers":["UniProtKB:O36014"],"synonyms":[{"name":"Spom972h-DNPEP","type":"exact"}],"termid":"PR:O36014"}


id: SO:1000143
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"LS is an autosynaptic chromosome carrying the two left (L = levo) telomeres.","definition_xrefs":["FB:manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosynaptic_chromosome","termid":"SO:1000136"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laevosynaptic_chromosome","synonyms":[{"name":"laevosynaptic chromosome","type":"exact"}],"termid":"SO:1000143"}


id: PBO:0079049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 5-1","termid":"PBO:0079049"}


id: MONDO:0042982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder arising from deficiency in the GATA2 with a wide spectrum of phenotypes. Autosomal dominant mutations of GATA2 cause a haploinsufficiency, which, in consequence, cause individuals to develop hematological, immunological, lymphatic, or other presentations. These often progress to severe organ (e.g. lung) failure, opportunistic infections, myelodysplastic syndrome, and/or acute myeloid leukemia. The most common clinical denominator is the propensity for myeloid neoplasia (myelodysplastic syndrome [MDS], myeloproliferative neoplasms [MPN], chronic myelomonocytic leukemia [CMML], acute myeloid leukemia [AML]).","definition_xrefs":["PMID:25397911","PMID:28637621","PMID:25619630","PMID:25624456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"GATA2 deficiency with susceptibility to MDS/AML","secondary_identifiers":["NCIT:C126349"],"synonyms":[{"name":"GATA2 deficiency","type":"exact"},{"name":"GATA2 deficiency with susceptibility to MDS/AML","type":"exact"},{"name":"GATA2 deficiency/MonoMac syndrome","type":"narrow"}],"termid":"MONDO:0042982","xrefs":{"Monarch":{"xref_id":"0042982"}}}


id: PBO:0004998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNA biogenesis protein (predicted)","termid":"PBO:0004998"}


id: GO:0045324
data:
  {"annotated_genes":["SJAG_03783","SJAG_05303","SJAG_01586","SJAG_00416","SJAG_01229","SJAG_00900","SJAG_16459","SJAG_00204","SJAG_01598","SJAG_04024","SJAG_03756","SJAG_01876","SJAG_04643","SJAG_05207","SJAG_00380","SJAG_07012","SJAG_04489","SJAG_02049","SJAG_03005","SJAG_04349","SJAG_01527","SJAG_03403","SJAG_03892","SJAG_03511","SJAG_01981","SJAG_05245","SJAG_00777","SJAG_04023","SJAG_00301","SJAG_02584","SJAG_02349","SJAG_00821","SJAG_04552","SJAG_02234","SJAG_04966","SJAG_04912","SJAG_02117","SJAG_04070","SJAG_02315","SJAG_03250","SJAG_04936","SJAG_04822","SJAG_01242","SJAG_01281","SJAG_02912","SJAG_04047"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87430,87600,89657,90987,91121,91485,92109,95450,96036,97450,99749,99809,100388,100617,101482,101631,103546,104466,105204,106050,106228,107116,108479,109285,109301,110125,110380,110957,116395,117929],"is_not":false,"summary":null,"term":"GO:0045324"},{"annotations":[106617,103625,112060,88087,98367,98188,91122,102645,109702,114371,103231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032511"},{"annotations":[104467,106052,87432,110958,108864,100390,109286,114205,115886,91772,91486,87601,90037,90988,95452,106861,91123,97452,110126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043328"}]},"cv_name":"biological_process","definition":"The directed movement of substances from late endosomes to the vacuole. In yeast, after transport to the prevacuolar compartment, endocytic content is delivered to the late endosome and on to the vacuole. This pathway is analogous to endosome to lysosome transport.","definition_xrefs":["PMID:11872141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transport","termid":"GO:0007034"},{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":46,"genes_by_uniquename":{"SJAG_00204":null,"SJAG_00301":null,"SJAG_00380":null,"SJAG_00416":null,"SJAG_00777":null,"SJAG_00821":null,"SJAG_00900":null,"SJAG_01229":null,"SJAG_01242":null,"SJAG_01281":null,"SJAG_01527":null,"SJAG_01586":null,"SJAG_01598":null,"SJAG_01876":null,"SJAG_01981":null,"SJAG_02049":null,"SJAG_02117":null,"SJAG_02234":null,"SJAG_02315":null,"SJAG_02349":null,"SJAG_02584":null,"SJAG_02912":null,"SJAG_03005":null,"SJAG_03250":null,"SJAG_03403":null,"SJAG_03511":null,"SJAG_03756":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_04023":null,"SJAG_04024":null,"SJAG_04047":null,"SJAG_04070":null,"SJAG_04349":null,"SJAG_04489":null,"SJAG_04552":null,"SJAG_04643":null,"SJAG_04822":null,"SJAG_04912":null,"SJAG_04936":null,"SJAG_04966":null,"SJAG_05207":null,"SJAG_05245":null,"SJAG_05303":null,"SJAG_07012":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"late endosome to vacuole transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0045324","terms_by_termid":{"GO:0032511":null,"GO:0043328":null,"GO:0045324":null}}


id: PBO:0036325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic kinetochore protein (Meikin) Moa1","termid":"PBO:0036325"}


id: GO:0120048
data:
  {"annotated_genes":["SJAG_01958"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94675],"is_not":false,"summary":null,"term":"GO:0120048"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine in U6 snRNA + S-adenosyl-L-methionine = H+ + N(6)-methyladenosine in U6 snRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:28525753","PMID:32266935","RHEA:52808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA methyltransferase activity","termid":"GO:0106346"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01958":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"U6 snRNA (adenine-(43)-N(6))-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.1.1.346","MetaCyc:RXN-18779"],"termid":"GO:0120048","terms_by_termid":{"GO:0120048":null}}


id: GO:0031853
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nociceptin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opioid receptor binding","termid":"GO:0031628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"nociceptin receptor binding","synonyms":[{"name":"nociceptin receptor ligand","type":"narrow"}],"termid":"GO:0031853"}


id: PBO:0061764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine aminotransferase pseudogene 1","termid":"PBO:0061764"}


id: PBO:0064808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 2","termid":"PBO:0064808"}


id: PBO:0046045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit C like","termid":"PBO:0046045"}


id: GO:0033717
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-gluconate + acceptor = 2-dehydro-D-gluconate + reduced acceptor.","definition_xrefs":["RHEA:12769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gluconate dehydrogenase activity","termid":"GO:0008875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"gluconate 2-dehydrogenase (acceptor) activity","secondary_identifiers":["EC:1.1.99.3","MetaCyc:GLUCONATE-2-DEHYDROGENASE-RXN"],"synonyms":[{"name":"2-ketogluconate reductase activity","type":"broad"},{"name":"D-gluconate dehydrogenase activity","type":"related"},{"name":"D-gluconate dehydrogenase, 2-keto-D-gluconate-yielding activity","type":"related"},{"name":"D-gluconate:(acceptor) 2-oxidoreductase activity","type":"related"},{"name":"D-gluconate:acceptor 2-oxidoreductase activity","type":"related"},{"name":"gluconate oxidase activity","type":"related"},{"name":"gluconic acid dehydrogenase activity","type":"related"},{"name":"gluconic dehydrogenase activity","type":"related"}],"termid":"GO:0033717"}


id: GO:0070774
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a phytoceramide + H2O = a fatty acid + phytosphingosine.","definition_xrefs":["GOC:pde","PMID:11356846"],"gene_count":0,"genotype_count":0,"name":"obsolete phytoceramidase activity (obsolete GO:0070774)","secondary_identifiers":["Reactome:R-HSA-428262"],"termid":"GO:0070774"}


id: GO:0042259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-asparagine to form peptidyl-L-beta-methylthioasparagine, typical of bacterial ribosomal protein S12.","definition_xrefs":["GOC:jsg","RESID:AA0320"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-beta-methylthioasparagine biosynthetic process from peptidyl-asparagine (obsolete GO:0042259)","synonyms":[{"name":"peptidyl-L-beta-methylthioasparagine anabolism from peptidyl-asparagine","type":"exact"},{"name":"peptidyl-L-beta-methylthioasparagine formation from peptidyl-asparagine","type":"exact"},{"name":"peptidyl-L-beta-methylthioasparagine synthesis from peptidyl-asparagine","type":"exact"}],"termid":"GO:0042259"}


id: GO:0072040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the occurrence or rate of mesenchymal stem cell death by apoptotic process that contributes to the shaping of the nephron.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:0072039"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic process involved in morphogenesis","termid":"GO:1902338"},{"relation_name":"is_a","term_name":"negative regulation of somatic stem cell population maintenance","termid":"GO:1904673"},{"relation_name":"is_a","term_name":"negative regulation of mesenchymal cell apoptotic process","termid":"GO:2001054"},{"relation_name":"negatively_regulates","term_name":"mesenchymal stem cell maintenance involved in nephron morphogenesis","termid":"GO:0072038"},{"relation_name":"negatively_regulates","term_name":"mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:1901145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis","synonyms":[{"name":"negative regulation of mesenchymal stem cell apoptosis involved in nephron morphogenesis","type":"narrow"},{"name":"negative regulation of mesenchymal stem cell apoptotic process involved in nephron morphogenesis","type":"exact"}],"termid":"GO:0072040"}


id: PBO:0051919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit beta 3","termid":"PBO:0051919"}


id: PBO:0055370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2799","termid":"PBO:0055370"}


id: PBO:0042687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cat eye syndrome chromosome region","termid":"PBO:0042687"}


id: MONDO:0013025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"6q25 microdeletion syndrome is a recently described syndrome characterized by developmental delay, facial dysmorphism and hearing loss.","definition_xrefs":["Orphanet:251056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 6","termid":"MONDO:0016905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6q24-q25 deletion syndrome","secondary_identifiers":["OMIM:612863","GARD:3764","SCTID:719663005","UMLS:C3150215","DOID:0060424","NCIT:C36470","MEDGEN:461565"],"synonyms":[{"name":"6q25 microdeletion syndrome","type":"exact"},{"name":"Del(6)(q25)","type":"exact"},{"name":"chromosome 6q24-q25 deletion syndrome","type":"exact"},{"name":"chromosome 6q25 microdeletion syndrome","type":"related"},{"name":"chromosome 6q25-q25 deletion syndrome","type":"exact"},{"name":"del(6q25)","type":"related"},{"name":"deletion 6q25","type":"related"},{"name":"monosomy 6q25","type":"exact"}],"termid":"MONDO:0013025","xrefs":{"Monarch":{"xref_id":"0013025"}}}


id: GO:0002723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of B cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of B cell mediated immunity","termid":"GO:0002714"},{"relation_name":"is_a","term_name":"positive regulation of cytokine production involved in immune response","termid":"GO:0002720"},{"relation_name":"is_a","term_name":"regulation of B cell cytokine production","termid":"GO:0002721"},{"relation_name":"positively_regulates","term_name":"B cell cytokine production","termid":"GO:0002368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of B cell cytokine production","synonyms":[{"name":"activation of B cell cytokine production","type":"narrow"},{"name":"positive regulation of B lymphocyte cytokine production","type":"exact"},{"name":"positive regulation of B-cell cytokine production","type":"exact"},{"name":"positive regulation of B-lymphocyte cytokine production","type":"exact"},{"name":"stimulation of B cell cytokine production","type":"narrow"},{"name":"up regulation of B cell cytokine production","type":"exact"},{"name":"up-regulation of B cell cytokine production","type":"exact"},{"name":"upregulation of B cell cytokine production","type":"exact"}],"termid":"GO:0002723"}


id: GO:0006749
data:
  {"annotated_genes":["SJAG_04726","SJAG_01995","SJAG_01162","SJAG_00903","SJAG_02599","SJAG_01612","SJAG_05181","SJAG_01351","SJAG_03494","SJAG_03316","SJAG_00988","SJAG_04858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87453,98773,102294,104718],"is_not":false,"summary":null,"term":"GO:0006749"},{"annotations":[96504,92791,117677,107921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006750"},{"annotations":[98703,97870,108205,101762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006751"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00903":null,"SJAG_00988":null,"SJAG_01162":null,"SJAG_01351":null,"SJAG_01612":null,"SJAG_01995":null,"SJAG_02599":null,"SJAG_03316":null,"SJAG_03494":null,"SJAG_04726":null,"SJAG_04858":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"glutathione metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glutathione metabolism","type":"exact"},{"name":"oxidized glutathione reduction","type":"narrow"}],"termid":"GO:0006749","terms_by_termid":{"GO:0006749":null,"GO:0006750":null,"GO:0006751":null}}


id: FYPO:0006959
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of succinate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular succinate level","synonyms":[{"name":"increased cellular succinate level during mitotic cell cycle","type":"related"},{"name":"increased cellular succinate level during vegetative growth","type":"exact"},{"name":"increased cellular succinate(2-) level","type":"exact"},{"name":"increased succinate accumulation","type":"related"}],"termid":"FYPO:0006959"}


id: GO:0016577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by removal of methyl groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histone demethylation (obsolete GO:0016577)","termid":"GO:0016577"}


id: PBO:0061953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 5","termid":"PBO:0061953"}


id: PBO:0044099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member A7","termid":"PBO:0044099"}


id: GO:0051394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the activity of the nerve growth factor (NGF) receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling receptor activity","termid":"GO:0010469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of nerve growth factor receptor activity","synonyms":[{"name":"regulation of NGF receptor activity","type":"exact"}],"termid":"GO:0051394"}


id: MONDO:1010057
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital hypothyroidism that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypothyroidism, non-human animal","secondary_identifiers":["OMIA:000536"],"termid":"MONDO:1010057","xrefs":{"Monarch":{"xref_id":"1010057"}}}


id: PBO:0047194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 210 member B","termid":"PBO:0047194"}


id: PBO:0072865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAM and SH3 domain containing 3","termid":"PBO:0072865"}


id: GO:0090587
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + glucosamine (out) = protein cysteine + glucosamine-6-phosphate (in).","definition_xrefs":["PMID:8246840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0005215","GO:0003824","GO:0016740","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"protein-phosphocysteine-glucosamine phosphotransferase system transporter activity","termid":"GO:0090587"}


id: MONDO:0031012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune form of uveitis (disease).","definition_xrefs":["MONDO:patterns/autoimmune"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease of ear, nose and throat","termid":"MONDO:0000587"},{"relation_name":"is_a","term_name":"uveitis","termid":"MONDO:0020283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005328"],"is_obsolete":false,"name":"autoimmune uveitis","secondary_identifiers":["DOID:0040088","MEDGEN:1843501","UMLS:C3888523"],"synonyms":[{"name":"autoimmune uveitis (disease)","type":"exact"}],"termid":"MONDO:0031012","xrefs":{"Monarch":{"xref_id":"0031012"}}}


id: PBO:0042367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD164 molecule like 2","termid":"PBO:0042367"}


id: GO:0004192
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds. Specificity similar to, but narrower than, that of pepsin A. Does not cleave the Gln4-His5 bond in the B chain of insulin.","definition_xrefs":["EC:3.4.23.5"],"gene_count":0,"genotype_count":0,"name":"obsolete cathepsin D activity (obsolete GO:0004192)","synonyms":[{"name":"cathepsin D activity","type":"exact"}],"termid":"GO:0004192"}


id: MONDO:0019880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal trisomy 5q is a rare chromosomal anomaly syndrome, resulting from a partial duplication of the long arm of chromosome 5, characterized by short stature, moderate intellectual disability, and craniofacial dysmorphism (microcephaly, flat facies, large, low-set dysplastic ears, down-slanted, almond-shaped palpebral fissures, hypertelorism, epicanthal folds, small nose, long philtrum, small mouth with thin upper lip, and micrognathia). Patients also frequently present speech and cognitive delay, cardiac (ventriculomegaly, ventricular septum defect) and skeletal abnormalities (craniosynostosis, radial agenesis, ulnar hypoplasia, brachydactyly) and genital malformations (hypospadias, cryptorchidism).","definition_xrefs":["Orphanet:96097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial trisomy of the long arm of chromosome 5","termid":"MONDO:0016956"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 5q","secondary_identifiers":["GARD:19313","MEDGEN:1646186","UMLS:C4706363","SCTID:763274002"],"synonyms":[{"name":"distal duplication 5q","type":"exact"},{"name":"distal trisomy type 5q","type":"exact"},{"name":"telomeric duplication 5q","type":"exact"},{"name":"trisomy 5qter","type":"exact"}],"termid":"MONDO:0019880","xrefs":{"Monarch":{"xref_id":"0019880"}}}


id: GO:0018776
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: trans-3-chloroacrylic acid + H2O = H+ + malonate semialdehyde.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-chloroacrylic acid dehalogenase activity (obsolete GO:0018776)","termid":"GO:0018776"}


id: GO:0004895
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding by a cell-adhesion protein on the cell surface to an extracellular matrix component, to mediate adhesion of the cell to the external substrate or to another cell and to initiate intracellular signaling. Cell adhesion receptors include integrins and cadherins.","definition_xrefs":["Wikipedia:Cell_adhesion","GOC:BHF-UCL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"},{"relation_name":"is_a","term_name":"cell adhesion mediator activity","termid":"GO:0098631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0098631"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0038023","GO:0005515","GO:0098631"],"is_obsolete":false,"name":"cell adhesion receptor activity","termid":"GO:0004895"}


id: GO:0010833
data:
  {"annotated_genes":["SJAG_03685","SJAG_05979","SJAG_01864","SJAG_02194","SJAG_02212","SJAG_04586","SJAG_03092","SJAG_01677","SJAG_03855","SJAG_04266","SJAG_01378","SJAG_00939"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91322,104601,105633],"is_not":false,"summary":null,"term":"GO:0010833"},{"annotations":[94573],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032210"},{"annotations":[90119,113319,90120,107606,88650,111045,99224,115444,107424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007004"}]},"cv_name":"biological_process","definition":"Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and lengthening the telomeric DNA.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance","termid":"GO:0000723"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00939":null,"SJAG_01378":null,"SJAG_01677":null,"SJAG_01864":null,"SJAG_02194":null,"SJAG_02212":null,"SJAG_03092":null,"SJAG_03685":null,"SJAG_03855":null,"SJAG_04266":null,"SJAG_04586":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0032200","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"telomere maintenance via telomere lengthening","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010833","terms_by_termid":{"GO:0007004":null,"GO:0010833":null,"GO:0032210":null}}


id: PBO:0079279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTK protein kinase","termid":"PBO:0079279"}


id: SO:0002341
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene encoding a 7SK RNA (SO:0002340).","definition_xrefs":["PMID:21853533","PMID:19246988","PMID:27369380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_7SK_gene","synonyms":[{"name":"7SK RNA gene","type":"exact"},{"name":"RNA 7SK gene","type":"exact"}],"termid":"SO:0002341"}


id: GO:0005053
data:
  {"annotated_genes":["SJAG_00326"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89917],"is_not":false,"summary":null,"term":"GO:0005053"}]},"cv_name":"molecular_function","definition":"Binding to a type 2 peroxisome targeting signal, a nonapeptide with a broad consensus sequence of (R/K)-(L/V/I)-(XXXXX)-(H/Q)-(L/A/F).","definition_xrefs":["PMID:11687502","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome targeting sequence binding","termid":"GO:0000268"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00326":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005048"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005048"],"is_obsolete":false,"name":"peroxisome matrix targeting signal-2 binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PEX7","type":"narrow"},{"name":"PTS2 binding","type":"exact"},{"name":"PTS2 receptor","type":"exact"},{"name":"peroxisomal targeting signal 2 (PTS2) binding","type":"exact"},{"name":"peroxisome targeting signal-2 binding","type":"exact"},{"name":"peroxisome targeting signal-2 receptor","type":"narrow"}],"termid":"GO:0005053","terms_by_termid":{"GO:0005053":null}}


id: GO:0106372
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + primary fluorescent dioxobilin-type chlorophyll catabolite = H+ + methanol + O13(4)-desmethyl pFCC.","definition_xrefs":["RHEA:67176","PMID:23723324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"primary fluorescent dioxobilin-type chlorophyll catabolite methylesterase activity","termid":"GO:0106372"}


id: MONDO:0016174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete paraneoplastic sensory ganglionopathy (obsolete MONDO:0016174)","secondary_identifiers":["Orphanet:208999"],"synonyms":[{"name":"paraneoplastic sensory neuronopathy","type":"exact"}],"termid":"MONDO:0016174","xrefs":{"Monarch":{"xref_id":"0016174"}}}


id: PBO:0054943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2357","termid":"PBO:0054943"}


id: MONDO:0044642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"c11orf73-related autosomal recessive hypomyelinating leukodystrophy","secondary_identifiers":["MEDGEN:1798879","Orphanet:495844","UMLS:C5567456","GARD:17910"],"synonyms":[{"name":"C11ORF73-related autosomal recessive hypomyelinating leukoencephalopathy","type":"exact"},{"name":"hypomyelinating leukodystrophy due to hikeshi deficiency","type":"exact"}],"termid":"MONDO:0044642","xrefs":{"Monarch":{"xref_id":"0044642"}}}


id: MONDO:0044743
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm affecting the major salivary glands. Representative examples include carcinoma, lymphoma, and sarcoma.","definition_xrefs":["NCIT:C4762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland cancer","termid":"MONDO:0004669"},{"relation_name":"is_a","term_name":"neoplasm of major salivary gland","termid":"MONDO:0021368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"major salivary gland cancer","secondary_identifiers":["MEDGEN:96919","SCTID:363378008","UMLS:C0496763"],"synonyms":[{"name":"cancer of major salivary gland","type":"exact"},{"name":"malignant major salivary gland neoplasm","type":"exact"},{"name":"malignant major salivary gland tumor","type":"exact"},{"name":"malignant major salivary gland tumour","type":"exact"},{"name":"malignant neoplasm of major salivary gland","type":"exact"},{"name":"malignant neoplasm of major salivary glands","type":"related"},{"name":"malignant neoplasm of the major salivary gland","type":"exact"},{"name":"malignant tumor of major salivary gland","type":"exact"},{"name":"malignant tumor of the major salivary gland","type":"exact"},{"name":"malignant tumour of major salivary gland","type":"exact"},{"name":"malignant tumour of the major salivary gland","type":"exact"}],"termid":"MONDO:0044743","xrefs":{"Monarch":{"xref_id":"0044743"}}}


id: MONDO:0006467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rapidly growing primary carcinoma of the thyroid gland composed of malignant squamous cells. The clinical course is usually aggressive.","definition_xrefs":["NCIT:C46008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"thyroid gland carcinoma","termid":"MONDO:0015075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thyroid gland squamous cell carcinoma","secondary_identifiers":["UMLS:C1710177","EFO:1000594","MEDGEN:328050"],"synonyms":[{"name":"squamous cell thyroid gland carcinoma","type":"exact"},{"name":"thyroid gland squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0006467","xrefs":{"Monarch":{"xref_id":"0006467"}}}


id: PR:Q8NKC0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB21E7.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8NKC0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-asparaginase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB21E7.09","synonyms":[{"name":"L-asparagine amidohydrolase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBPB21E7.09","type":"exact"}],"termid":"PR:Q8NKC0"}


id: SO:0002301
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA regions delimited by different nonspurious TSS-TTS pairs.","definition_xrefs":["Bacterial_regulation_working_group:CMA","PMID:32665585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unit_of_gene_expression","termid":"SO:0002300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription_unit","synonyms":[{"name":"transcription unit","type":"exact"}],"termid":"SO:0002301"}


id: GO:0043474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a pigment, any general or particular coloring matter in living organisms, resulting in the deposition or aggregation of pigment in an organism, tissue or cell.","definition_xrefs":["GOC:tb","GOC:dph","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment metabolic process","termid":"GO:0042440"},{"relation_name":"part_of","term_name":"pigmentation","termid":"GO:0043473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment metabolic process involved in pigmentation","synonyms":[{"name":"pigment metabolic process during pigmentation","type":"related"},{"name":"pigment metabolism during pigmentation","type":"related"}],"termid":"GO:0043474"}


id: GO:0102786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: O2 + a stearoyl-[acp] + a reduced ferredoxin = 2 H2O + an oleoyl-[acp] + an oxidized ferredoxin.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete stearoyl-[acp] desaturase activity (obsolete GO:0102786)","termid":"GO:0102786"}


id: GO:0042405
data:
  {"annotated_genes":["SJAG_03300","SJAG_03543","SJAG_00082","SJAG_01408","SJAG_01837","SJAG_04055","SJAG_04645","SJAG_00302","SJAG_00335","SJAG_04140","SJAG_01186","SJAG_00471","SJAG_01374","SJAG_04768","SJAG_01805","SJAG_00178","SJAG_04855","SJAG_03745","SJAG_03048","SJAG_03161","SJAG_04187","SJAG_04601"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[114985,110683,112085,114385,114984,90431,101775,98538,91723,101855,89465,104873,116160,86969,93274,112087,103799,88213,88214,103706,111537,105235,88473,112086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140602"}]},"cv_name":"cellular_component","definition":"An intranuclear focus at which aggregated proteins have been sequestered.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body","termid":"GO:0016234"},{"relation_name":"part_of","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00178":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00471":null,"SJAG_01186":null,"SJAG_01374":null,"SJAG_01408":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03161":null,"SJAG_03300":null,"SJAG_03543":null,"SJAG_03745":null,"SJAG_04055":null,"SJAG_04140":null,"SJAG_04187":null,"SJAG_04601":null,"SJAG_04645":null,"SJAG_04768":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nuclear inclusion body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042405","terms_by_termid":{"GO:0140602":null}}


id: FYECO:0000274
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose, salts, water and with adenine as the nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, adenine nitrogen source","termid":"FYECO:0000274"}


id: PR:Q9UT27
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pvg1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvyl transferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8F11.10c","synonyms":[{"name":"PvGal synthesis protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pvg1","type":"exact"},{"name":"pyruvylated Gal-beta-1,3-epitope synthesis protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT27"}


id: PBO:0054457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1854","termid":"PBO:0054457"}


id: GO:0031954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the phosphorylation by a protein of one or more of its own residues.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein phosphorylation","termid":"GO:0001934"},{"relation_name":"is_a","term_name":"regulation of protein autophosphorylation","termid":"GO:0031952"},{"relation_name":"positively_regulates","term_name":"protein autophosphorylation","termid":"GO:0046777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein autophosphorylation","synonyms":[{"name":"activation of protein amino acid autophosphorylation","type":"narrow"},{"name":"positive regulation of protein amino acid autophosphorylation","type":"exact"},{"name":"stimulation of protein amino acid autophosphorylation","type":"narrow"},{"name":"up regulation of protein amino acid autophosphorylation","type":"exact"},{"name":"up-regulation of protein amino acid autophosphorylation","type":"exact"},{"name":"upregulation of protein amino acid autophosphorylation","type":"exact"}],"termid":"GO:0031954"}


id: PBO:0068530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 131, pseudogene","termid":"PBO:0068530"}


id: PBO:0064683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 19","termid":"PBO:0064683"}


id: PBO:0077117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 29","termid":"PBO:0077117"}


id: GO:0038123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding of a heterodimeric TLR1:TLR2 complex, followed by transmission of the signal by the activated receptor, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:17318230","GOC:signaling","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toll-like receptor signaling pathway","termid":"GO:0002224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"toll-like receptor TLR1:TLR2 signaling pathway","secondary_identifiers":["Reactome:R-HSA-168179"],"synonyms":[{"name":"TLR2:TLR1 signaling pathway","type":"exact"},{"name":"toll-like receptor TLR1:TLR2 signalling pathway","type":"exact"}],"termid":"GO:0038123"}


id: PBO:0083139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data","termid":"PBO:0083139"}


id: MONDO:0003178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete laryngeal adenoid cystic carcinoma (obsolete MONDO:0003178)","termid":"MONDO:0003178","xrefs":{"Monarch":{"xref_id":"0003178"}}}


id: GO:0071876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of signal initiation in which epinephrine or norepinephrine causes activation of an adrenergic receptor.","definition_xrefs":["GOC:BHF","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete initiation of adrenergic receptor signal transduction (obsolete GO:0071876)","synonyms":[{"name":"initiation of adrenergic receptor signal transduction","type":"exact"}],"termid":"GO:0071876"}


id: PBO:0061064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium/potassium transporting ATPase interacting 3","termid":"PBO:0061064"}


id: GO:1901220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac chamber morphogenesis.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of cardiac chamber morphogenesis","termid":"GO:1901219"},{"relation_name":"negatively_regulates","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac chamber morphogenesis","synonyms":[{"name":"down regulation of cardiac chamber morphogenesis","type":"exact"},{"name":"down regulation of heart chamber morphogenesis","type":"exact"},{"name":"down-regulation of cardiac chamber morphogenesis","type":"exact"},{"name":"down-regulation of heart chamber morphogenesis","type":"exact"},{"name":"downregulation of cardiac chamber morphogenesis","type":"exact"},{"name":"downregulation of heart chamber morphogenesis","type":"exact"},{"name":"inhibition of cardiac chamber morphogenesis","type":"narrow"},{"name":"inhibition of heart chamber morphogenesis","type":"narrow"},{"name":"negative regulation of heart chamber morphogenesis","type":"exact"}],"termid":"GO:1901220"}


id: PBO:0061738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexophilin and PC-esterase domain family member 2","termid":"PBO:0061738"}


id: PBO:0042714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell migration inducing hyaluronidase 2","termid":"PBO:0042714"}


id: GO:0106264
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: GTP + L-seryl-[protein] = GDP + H+ + O-phospho-L-seryl-[protein].","definition_xrefs":["RHEA:64020","GOC:sp","PMID:32322062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0004672","GO:0016301","GO:0140096","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"protein serine kinase activity (using GTP as donor)","termid":"GO:0106264"}


id: FYPO:0007454
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of ATP binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ATP binding","termid":"FYPO:0003671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased ATP binding","synonyms":[{"name":"reduced ATP binding","type":"exact"}],"termid":"FYPO:0007454"}


id: MONDO:0007470
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by multiple doughnut-shaped hyperostotic or osteosclerotic lesions of the calvaria.","definition_xrefs":["Orphanet:85192"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"calvarial doughnut lesions-bone fragility syndrome","secondary_identifiers":["OMIM:126550","DOID:0080721","GARD:16739","MESH:C565089","MEDGEN:377572","SCTID:720598005","UMLS:C1852022"],"synonyms":[{"name":"calvarial doughnut lesions with bone fragility with or without spondylometaphyseal dysplasia","type":"exact"},{"name":"doughnut lesions of skull, familial","type":"related"},{"name":"familial doughnut lesions of skull","type":"exact"}],"termid":"MONDO:0007470","xrefs":{"Monarch":{"xref_id":"0007470"}}}


id: GO:0031591
data:
  {"annotated_genes":["SJAG_04265","SJAG_01261","SJAG_05334","SJAG_04735"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94187,97562,105424,113313],"is_not":false,"summary":null,"term":"GO:0031591"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of wybutosine, 3H-imidazo[1,2-alpha]purine-7-butanoic acid, 4,9-dihydro- alpha-[(methoxycarbonyl)amino]- 4,6-dimethyl-9-oxo- 3-beta-D-ribofuranosyl methyl ester, a modified nucleoside found in some tRNA molecules.","definition_xrefs":["RNAmods:037","GOC:mah","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"},{"relation_name":"is_a","term_name":"wybutosine metabolic process","termid":"GO:0031590"},{"relation_name":"is_a","term_name":"glycosyl compound biosynthetic process","termid":"GO:1901659"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01261":null,"SJAG_04265":null,"SJAG_04735":null,"SJAG_05334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"wybutosine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"yW biosynthesis","type":"exact"},{"name":"yW biosynthetic process","type":"exact"}],"termid":"GO:0031591","terms_by_termid":{"GO:0031591":null}}


id: GO:0051188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a cofactor, a substance that is required for the activity of an enzyme or other protein.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cofactor biosynthetic process (obsolete GO:0051188)","synonyms":[{"name":"cofactor anabolism","type":"exact"},{"name":"cofactor biosynthesis","type":"exact"},{"name":"cofactor formation","type":"exact"},{"name":"cofactor synthesis","type":"exact"}],"termid":"GO:0051188"}


id: PBO:0018098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L15 Mrp15 (predicted)","termid":"PBO:0018098"}


id: MONDO:0022432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"alves Castelo dos Santos syndrome","secondary_identifiers":["UMLS:C2931256","MEDGEN:419758","MESH:C536593"],"synonyms":[{"name":"ectodermal dysplasia syndrome of hypotrichosis, onychodysplasia, hyperkeratosis, kyphoscoliosis, and cataract","type":"related"}],"termid":"MONDO:0022432","xrefs":{"Monarch":{"xref_id":"0022432"}}}


id: GO:0051046
data:
  {"annotated_genes":["SJAG_02366","SJAG_00661","SJAG_03763","SJAG_04509"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045921"},{"annotations":[87376,97899,93329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017157"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the controlled release of a substance from a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"secretion","termid":"GO:0046903"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00661":null,"SJAG_02366":null,"SJAG_03763":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of secretion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051046","terms_by_termid":{"GO:0017157":null,"GO:0045921":null}}


id: MONDO:1011626
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperkinesis, non-human animal","secondary_identifiers":["OMIA:000503"],"termid":"MONDO:1011626","xrefs":{"Monarch":{"xref_id":"1011626"}}}


id: SO:0001271
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A bacterial RNA with both tRNA and mRNA like properties.","direct_ancestors":[{"relation_name":"has_quality","term_name":"tmRNA_encoding","termid":"SO:0000659"},{"relation_name":"is_a","term_name":"sncRNA_gene","termid":"SO:0002342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tmRNA_gene","synonyms":[{"name":"tmRNA gene","type":"exact"}],"termid":"SO:0001271"}


id: PBO:0084279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein of the endoplasmic reticulum; required for normal content of cell wall beta-1,6-glucan","termid":"PBO:0084279"}


id: GO:0003991
data:
  {"annotated_genes":["SJAG_00636"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97655],"is_not":false,"summary":null,"term":"GO:0003991"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + N-acetyl-L-glutamate = ADP + N-acetyl-L-glutamate-5-phosphate.","definition_xrefs":["EC:2.7.2.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00636":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"acetylglutamate kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ACETYLGLUTKIN-RXN","RHEA:14629"],"synonyms":[{"name":"ATP:N-acetyl-L-glutamate 5-phosphotransferase activity","type":"related"},{"name":"N-acetylglutamate 5-phosphotransferase activity","type":"related"},{"name":"N-acetylglutamate kinase activity","type":"related"},{"name":"N-acetylglutamate phosphokinase activity","type":"related"},{"name":"N-acetylglutamic 5-phosphotransferase activity","type":"related"},{"name":"acetylglutamate phosphokinase activity","type":"related"}],"termid":"GO:0003991","terms_by_termid":{"GO:0003991":null}}


id: PBO:0047585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor receptor 3 pseudogene 5","termid":"PBO:0047585"}


id: FYPO:0003822
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a ribonuclease activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribonuclease activity","termid":"FYPO:0003821"},{"relation_name":"is_a","term_name":"decreased nuclease activity","termid":"FYPO:0004253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"decreased ribonuclease activity","synonyms":[{"name":"reduced ribonuclease activity","type":"exact"}],"termid":"FYPO:0003822"}


id: GO:0062012
data:
  {"annotated_genes":["SJAG_02104","SJAG_05006","SJAG_05314","SJAG_04018","SJAG_02785","SJAG_03130","SJAG_02406","SJAG_00685","SJAG_01187","SJAG_01307","SJAG_03538","SJAG_02044","SJAG_02380","SJAG_04422","SJAG_01672","SJAG_01402"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"},{"annotations":[110753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045717"},{"annotations":[72581,75550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[110863,114976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[109345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"},{"annotations":[96064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001172"},{"annotations":[89168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"},{"annotations":[88514,113177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090180"},{"annotations":[88667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904775"},{"annotations":[98532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010510"},{"annotations":[109346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045540"},{"annotations":[88039,88040,105332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032443"},{"annotations":[98533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010906"},{"annotations":[88690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006110"},{"annotations":[117502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905706"},{"annotations":[75549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a small molecule metabolic process.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_01187":null,"SJAG_01307":null,"SJAG_01402":null,"SJAG_01672":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_02380":null,"SJAG_02406":null,"SJAG_02785":null,"SJAG_03130":null,"SJAG_03538":null,"SJAG_04018":null,"SJAG_04422":null,"SJAG_05006":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of small molecule metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9861718"],"synonyms":[{"name":"regulation of small molecule metabolism","type":"exact"}],"termid":"GO:0062012","terms_by_termid":{"GO:0006110":null,"GO:0010510":null,"GO:0010895":null,"GO:0010906":null,"GO:0032443":null,"GO:0043456":null,"GO:0045540":null,"GO:0045717":null,"GO:0045820":null,"GO:0070452":null,"GO:0090180":null,"GO:1904775":null,"GO:1905706":null,"GO:1905857":null,"GO:2001172":null,"GO:2001211":null}}


id: PBO:0050012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexokinase domain containing 1","termid":"PBO:0050012"}


id: PBO:0085653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in mitochondrial fission and peroxisome abundance; may have a distinct role in tethering protein aggregates to mitochondria in order to retain them in the mother cell; required for localization of Dnm1p and Mdv1p during mitochondrial division; mediates ethanol-induced apoptosis and ethanol-induced mitochondrial fragmentation","termid":"PBO:0085653"}


id: MONDO:0030293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary angioedema","termid":"MONDO:0019623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"angioedema, hereditary, 5","secondary_identifiers":["UMLS:C5543508","OMIM:619361","MEDGEN:1780904"],"synonyms":[{"name":"HAE5","type":"exact"},{"name":"angioedema, hereditary, 5","type":"exact"}],"termid":"MONDO:0030293","xrefs":{"Monarch":{"xref_id":"0030293"}}}


id: MONDO:0019306
data:
  {"annotated_genes":["SJAG_02085","SJAG_02842"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84764,84765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014010"}]},"cv_name":"mondo","definition":"A variant of autosomal recessive congenital ichthyosis (ARCI), a rare epidermal disease, characterized by fine, whitish scales on a background of erythematous skin over the whole body.","definition_xrefs":["Orphanet:79394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"autosomal recessive congenital ichthyosis","termid":"MONDO:0017265"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02085":null,"SJAG_02842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0006025"],"is_obsolete":false,"name":"congenital non-bullous ichthyosiform erythroderma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:205550003","MEDGEN:38180","DOID:1699","NANDO:1200617","NCIT:C84805","GARD:9736","HP:0007431","icd11.foundation:546439698","MESH:D017490","NANDO:1200616","UMLS:C0079154"],"synonyms":[{"name":"CIE","type":"exact"},{"name":"alligator skin","type":"exact"},{"name":"congenital ichthyosiform erythroderma","type":"exact"},{"name":"congenital ichthyosiform erythroderma (disease)","type":"exact"},{"name":"congenital non bullous ichthyosiform erythroderma","type":"exact"},{"name":"erythrodermic ichthyosis","type":"exact"},{"name":"ichthyosiform erythroderma","type":"exact"},{"name":"lamellar desquamation of the newborn","type":"related"},{"name":"lamellar ichthyosis","type":"related"},{"name":"non-bullous congenital ichthyosiform erythroderma","type":"exact"},{"name":"nonbullous congenital ichthyosiform erythroderma","type":"exact"}],"termid":"MONDO:0019306","terms_by_termid":{"MONDO:0014010":null},"xrefs":{"Monarch":{"xref_id":"0019306"}}}


id: PBO:0077570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 276","termid":"PBO:0077570"}


id: PBO:0082728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rix1 complex and pre-replicative complexes (pre-RCs); required for processing of ITS2 sequences from 35S pre-rRNA; component of the pre-60S ribosomal particle with the dynein-related AAA-type ATPase Mdn1p; required for pre-RC formation and maintenance during DNA replication licensing; highly conserved protein which contains several WD40 motifs; IPI3 is an essential gene; other members include Rix1p, Ipi1p, and Ipi3p","termid":"PBO:0082728"}


id: FYPO:0002172
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more RNAs that are normally expressed during nitrogen starvation measured in a cell is higher than normal (i.e. higher than observed in wild-type cells during vegetative growth).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased level of nitrogen starvation gene mRNA during vegetative growth","synonyms":[{"name":"increased level of cellular response to nitrogen starvation gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of nitrogen depletion gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of nitrogen deprivation gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of nitrogen starvation gene RNA during vegetative growth","type":"exact"},{"name":"increased level of nitrogen starvation gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of nitrogen starvation gene transcripts during vegetative growth","type":"exact"},{"name":"increased nitrogen starvation gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0002172"}


id: PBO:0058327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4700","termid":"PBO:0058327"}


id: FYPO:0007681
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate or other catalytic property of a RNA-DNA hybrid ribonuclease activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribonuclease activity","termid":"FYPO:0003821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"abnormal RNA-DNA hybrid ribonuclease activity","termid":"FYPO:0007681"}


id: MONDO:0012350
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"atypical hemolytic-uremic syndrome","termid":"MONDO:0016244"},{"relation_name":"is_a","term_name":"hereditary nephritis","termid":"MONDO:0005334"},{"relation_name":"is_a","term_name":"non-immunoglobulin-mediated membranoproliferative glomerulonephritis","termid":"MONDO:0018013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"complement factor H deficiency","secondary_identifiers":["MESH:C562875","SCTID:234622003","GARD:18551","ICD9:279.8","MEDGEN:96024","NANDO:2200791","OMIM:609814","UMLS:C0398777"],"synonyms":[{"name":"CFHD","type":"related"},{"name":"Cfh deficiency","type":"related"},{"name":"complement factor H deficiency","type":"exact"},{"name":"factor H deficiency","type":"related"}],"termid":"MONDO:0012350","xrefs":{"Monarch":{"xref_id":"0012350"}}}


id: PBO:0039862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 26","termid":"PBO:0039862"}


id: PATO:0001484
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process which occurs near to or not long before the present.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"onset quality","termid":"PATO:0002325"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recent","termid":"PATO:0001484"}


id: MONDO:1011799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inherited periodic spasticity, non-human animal","secondary_identifiers":["OMIA:001453"],"termid":"MONDO:1011799","xrefs":{"Monarch":{"xref_id":"1011799"}}}


id: PBO:0056779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mex-3 RNA binding family member A","termid":"PBO:0056779"}


id: PBO:0031900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein level, annotation_extension=during(GO:0000090)","termid":"PBO:0031900"}


id: MONDO:0010292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"FHL1-related myopathy","termid":"MONDO:0800462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"Uruguay Faciocardiomusculoskeletal syndrome","secondary_identifiers":["DOID:0112148","MEDGEN:335320","MESH:C564544","OMIM:300280","UMLS:C1846010"],"synonyms":[{"name":"FCMSU","type":"related"},{"name":"Fcms","type":"related"},{"name":"URUGUAY FACIOCARDIOMUSCULOSKELETAL syndrome","type":"related"},{"name":"Uruguay Faciocardiomusculoskeletal syndrome","type":"exact"},{"name":"faciocardiomusculoskeletal syndrome, Uruguay type","type":"related"},{"name":"uruguay faciocardiomusculoskeletal syndrome, X-linked recessive","type":"exact"}],"termid":"MONDO:0010292","xrefs":{"Monarch":{"xref_id":"0010292"}}}


id: PBO:0076700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCERG1 pseudogene 2","termid":"PBO:0076700"}


id: MONDO:0033336
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic tracheal anomaly (obsolete MONDO:0033336)","secondary_identifiers":["Orphanet:435612"],"termid":"MONDO:0033336","xrefs":{"Monarch":{"xref_id":"0033336"}}}


id: MONDO:1010157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperostosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperostosis, non-human animal","secondary_identifiers":["OMIA:000507"],"termid":"MONDO:1010157","xrefs":{"Monarch":{"xref_id":"1010157"}}}


id: FYPO:0005745
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype in which the export of protein from the nucleus is abnormal. Export of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear transport","termid":"FYPO:0005573"},{"relation_name":"is_a","term_name":"abnormal protein transport","termid":"FYPO:0005744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein export from nucleus","termid":"FYPO:0005745"}


id: GO:0051124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a synapse at a neuromuscular junction.","definition_xrefs":["PMID:20215342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse assembly","termid":"GO:0007416"},{"relation_name":"is_a","term_name":"neuromuscular junction development","termid":"GO:0007528"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"synaptic assembly at neuromuscular junction","synonyms":[{"name":"cholinergic synaptogenesis","type":"related"},{"name":"synaptic growth at neuromuscular junction","type":"related"}],"termid":"GO:0051124"}


id: MONDO:0015139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare epilepsy.","gene_count":0,"genotype_count":0,"name":"obsolete rare epilepsy (obsolete MONDO:0015139)","secondary_identifiers":["Orphanet:101998"],"synonyms":[{"name":"rare epilepsy","type":"exact"}],"termid":"MONDO:0015139","xrefs":{"Monarch":{"xref_id":"0015139"}}}


id: GO:0043590
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a bacterial cell to which the DNA is confined.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoid","termid":"GO:0009295"},{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial nucleoid","termid":"GO:0043590"}


id: GO:0052506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of symbiont ethylene-mediated signal transduction pathways during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont ethylene-mediated signal transduction pathway (obsolete GO:0052506)","synonyms":[{"name":"activation by organism of defense-related symbiont ethylene-mediated signal transduction pathway","type":"narrow"},{"name":"induction by organism of defense-related symbiont ethylene-mediated signal transduction pathway","type":"narrow"},{"name":"positive regulation by organism of defense-related symbiont ethylene-mediated signal transduction pathway","type":"exact"},{"name":"upregulation by organism of defense-related symbiont ethylene-mediated signal transduction pathway","type":"narrow"}],"termid":"GO:0052506"}


id: PBO:0029974
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_cell_cycle_arrest","termid":"PBO:0029974"}


id: PBO:0039762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APRG1 tumor suppressor candidate","termid":"PBO:0039762"}


id: PBO:0074507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear RNA activating complex polypeptide 5 pseudogene 1","termid":"PBO:0074507"}


id: GO:0045687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glia cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gliogenesis","termid":"GO:0014015"},{"relation_name":"is_a","term_name":"regulation of glial cell differentiation","termid":"GO:0045685"},{"relation_name":"positively_regulates","term_name":"glial cell differentiation","termid":"GO:0010001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glial cell differentiation","synonyms":[{"name":"activation of glial cell differentiation","type":"narrow"},{"name":"positive regulation of glia cell differentiation","type":"exact"},{"name":"positive regulation of neuroglia differentiation","type":"exact"},{"name":"stimulation of glial cell differentiation","type":"narrow"},{"name":"up regulation of glial cell differentiation","type":"exact"},{"name":"up-regulation of glial cell differentiation","type":"exact"},{"name":"upregulation of glial cell differentiation","type":"exact"}],"termid":"GO:0045687"}


id: GO:0010032
data:
  {"annotated_genes":["SJAG_03161"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111540],"is_not":false,"summary":null,"term":"GO:0010032"}]},"cv_name":"biological_process","definition":"Compaction of chromatin structure prior to meiosis in eukaryotic cells.","definition_xrefs":["PMID:10072401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome condensation","termid":"GO:0030261"},{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03161":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"meiotic chromosome condensation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"chromosome condensation involved in meiotic cell cycle","type":"exact"}],"termid":"GO:0010032","terms_by_termid":{"GO:0010032":null}}


id: MONDO:0010327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, life-threatening neurometabolic disease characterized by a progressive neurodegenerative course, epilepsy, retinopathy and progressive cardiomyopathy.","definition_xrefs":["Orphanet:391417"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"inborn mitochondrial metabolism disorder","termid":"MONDO:0004069"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"HSD10 mitochondrial disease","secondary_identifiers":["OMIM:300438","GARD:10716","SCTID:791000124107","MESH:C564560","OMIM:300220","DOID:0060810","UMLS:C3266731","MESH:C536080","MEDGEN:781653"],"synonyms":[{"name":"17 beta-hydroxysteroid dehydrogenase type 10 deficiency","type":"related"},{"name":"17-beta-hydroxysteroid dehydrogenase 10 deficiency","type":"exact"},{"name":"17-beta-hydroxysteroid dehydrogenase X deficiency","type":"exact"},{"name":"2-methyl-3-hydroxybutyric aciduria","type":"exact"},{"name":"2-methyl-3-hydroxybutyryl-CoA dehydrogenase deficiency","type":"exact"},{"name":"2M3HBA","type":"related"},{"name":"3-hydroxy-2-methylbutyryl-CoA dehydrogenase deficiency","type":"related"},{"name":"3-hydroxyacyl-CoA dehydrogenase 2 deficiency","type":"exact"},{"name":"3H2MBD deficiency","type":"related"},{"name":"HSD10 deficiency","type":"exact"},{"name":"HSD10 deficiency, atypical type","type":"narrow"},{"name":"HSD10 mitochondrial disease","type":"exact"},{"name":"HSD10 mitochondrial disease, X-linked dominant","type":"exact"},{"name":"HSD10MD","type":"exact"},{"name":"HSD17B10 deficiency","type":"exact"},{"name":"MHBD deficiency","type":"exact"},{"name":"MRXS10","type":"exact"},{"name":"X-linked intellectual disability-choreoathetosis-abnormal behavior syndrome","type":"narrow"},{"name":"X-linked intellectual disability-choreoathetosis-abnormal behaviour syndrome","type":"narrow"},{"name":"chorioathetosis with mental retardation and abnormal behavior","type":"exact"},{"name":"chorioathetosis with mental retardation and abnormal behaviour","type":"exact"},{"name":"hydroxyacyl-CoA dehydrogenase II deficiency","type":"related"},{"name":"mental retardation with chorioathetosis and abnormal behavior","type":"exact"},{"name":"mental retardation with chorioathetosis and abnormal behaviour","type":"exact"},{"name":"mental retardation, X-linked syndromic 10","type":"exact"},{"name":"mental retardation, X-linked, syndromic 10","type":"exact"},{"name":"mental retardation, X-linked, syndromic type 10","type":"exact"},{"name":"syndromic X-linked intellectual disability type 10","type":"narrow"}],"termid":"MONDO:0010327","xrefs":{"Monarch":{"xref_id":"0010327"}}}


id: GO:0006314
data:
  {"annotated_genes":["SJAG_MIT07","SJAG_MIT05","SJAG_MIT06"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118532,118533,118540,118541],"is_not":false,"summary":null,"term":"GO:0006314"}]},"cv_name":"biological_process","definition":"Lateral transfer of an intron to a homologous allele that lacks the intron, mediated by a site-specific endonuclease encoded within the mobile intron.","definition_xrefs":["PMID:10487208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":3,"genes_by_uniquename":{"SJAG_MIT05":null,"SJAG_MIT06":null,"SJAG_MIT07":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"intron homing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006314","terms_by_termid":{"GO:0006314":null}}


id: PBO:0005638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine 5'-monophosphoramidase (predicted)","termid":"PBO:0005638"}


id: PBO:0029085
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_clotrimazole","termid":"PBO:0029085"}


id: PBO:0044193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin B","termid":"PBO:0044193"}


id: GO:1903650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of cytoplasmic transport.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:25049409"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cytoplasmic transport (obsolete GO:1903650)","synonyms":[{"name":"down regulation of cytoplasmic streaming","type":"narrow"},{"name":"down regulation of cytoplasmic transport","type":"exact"},{"name":"down-regulation of cytoplasmic streaming","type":"narrow"},{"name":"down-regulation of cytoplasmic transport","type":"exact"},{"name":"downregulation of cytoplasmic streaming","type":"narrow"},{"name":"downregulation of cytoplasmic transport","type":"exact"},{"name":"inhibition of cytoplasmic streaming","type":"narrow"},{"name":"inhibition of cytoplasmic transport","type":"narrow"},{"name":"negative regulation of cytoplasmic streaming","type":"narrow"}],"termid":"GO:1903650"}


id: GO:1902985
data:
  {"annotated_genes":["SJAG_02074","SJAG_00247","SJAG_02607"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102823,110052,114517],"is_not":false,"summary":null,"term":"GO:1902985"}]},"cv_name":"biological_process","definition":"Any pre-replicative complex assembly involved in mitotic cell cycle DNA replication.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-replicative complex assembly involved in nuclear cell cycle DNA replication","termid":"GO:0006267"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_02074":null,"SJAG_02607":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0007049","GO:0006260","GO:0065003","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"mitotic pre-replicative complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear pre-replicative complex assembly involved in mitotic cell cycle","type":"exact"},{"name":"pre-replicative complex assembly involved in mitotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902985","terms_by_termid":{"GO:1902985":null}}


id: PBO:0075591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine peptidase inhibitor, Kunitz type 3","termid":"PBO:0075591"}


id: PBO:0078815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trophinin associated protein","termid":"PBO:0078815"}


id: GO:0097511
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A branched cellular projection (or cytoplasmic extension) that is extended from the surface of a dendritic immune cell, and which enables the cell to sample luminal pathogens and increase the surface area for antigen presentation to T cells.","definition_xrefs":["GOC:cjm","GOC:BHF","CL:0000451","PMID:12200351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic cell dendrite","termid":"GO:0097511"}


id: PBO:0055043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2458","termid":"PBO:0055043"}


id: PBO:0013122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MS calcium ion channel protein Msy1","termid":"PBO:0013122"}


id: GO:0072728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a Gentian violet stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to Gentian violet","synonyms":[{"name":"response to crystal violet","type":"exact"},{"name":"response to {4-[Bis-(4-dimethylamino-phenyl)-methylene]-cyclohexa-2,5-dienylidene}-dimethyl-ammonium chloride","type":"exact"}],"termid":"GO:0072728"}


id: FYPO:0008170
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a cyclin-dependent protein kinase activity is decreased.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity","termid":"FYPO:0001382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"decreased cyclin-dependent protein kinase activity","termid":"FYPO:0008170"}


id: PBO:0083222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps verified gene SSA1/YAL005C","termid":"PBO:0083222"}


id: GO:0071877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an adenylate cyclase-inhibiting adrenergic receptor signaling pathway activity. An adrenergic receptor signaling pathway is the series of molecular signals generated as a consequence of an adrenergic receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"regulates","term_name":"adenylate cyclase-inhibiting adrenergic receptor signaling pathway","termid":"GO:0071881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of adenylate cyclase-inhibiting adrenergic receptor signaling pathway","synonyms":[{"name":"regulation of adrenergic receptor signaling pathway","type":"exact"},{"name":"regulation of adrenergic receptor signalling pathway","type":"exact"}],"termid":"GO:0071877"}


id: MONDO:0005774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition resulting from infection by Burkholderia mallei, which mainly affects horses.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"burkholderia infectious disease","termid":"MONDO:0043953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glanders","secondary_identifiers":["SCTID:4639008","DOID:13444","EFO:0007286","icd11.foundation:1563156715","MESH:D005896","ICD10CM:A24.0","NCIT:C34638","MEDGEN:42221","UMLS:C0017589","ICD9:024","Orphanet:659908"],"synonyms":[{"name":"Burkholderia mallei","type":"related"},{"name":"Burkholderia mallei caused disease or disorder","type":"exact"},{"name":"Burkholderia mallei disease or disorder","type":"exact"},{"name":"Burkholderia mallei infection","type":"related"},{"name":"Burkholderia mallei infectious disease","type":"exact"},{"name":"farcy pipes","type":"exact"},{"name":"infection due to Pseudomonas mallei","type":"exact"}],"termid":"MONDO:0005774","xrefs":{"Monarch":{"xref_id":"0005774"}}}


id: PBO:0055674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIPC antisense RNA 1","termid":"PBO:0055674"}


id: MONDO:0000559
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0000559 (obsolete MONDO:0000559)","termid":"MONDO:0000559","xrefs":{"Monarch":{"xref_id":"0000559"}}}


id: MONDO:0005729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection with flukes of the genus Dicrocoelium.","definition_xrefs":["MESH:D004011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dicrocoeliasis","secondary_identifiers":["icd11.foundation:1114361195","ICD9:121.8","SCTID:105668007","DOID:1219","MEDGEN:3813","UMLS:C0012102"],"synonyms":[{"name":"Dicrocoelium caused disease or disorder","type":"exact"},{"name":"Dicrocoelium disease or disorder","type":"exact"},{"name":"Dicrocoelium infectious disease","type":"exact"},{"name":"disease due to Dicrocoeliidae","type":"exact"}],"termid":"MONDO:0005729","xrefs":{"Monarch":{"xref_id":"0005729"}}}


id: MONDO:0017273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal ichthyosis syndrome with fatal disease course (obsolete MONDO:0017273)","secondary_identifiers":["Orphanet:281241"],"termid":"MONDO:0017273","xrefs":{"Monarch":{"xref_id":"0017273"}}}


id: SO:0005847
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is a member of a gene cassette, which is a mobile genetic element.","direct_ancestors":[{"relation_name":"is_a","term_name":"gene_cassette_member","termid":"SO:0005848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cassette_array_member","synonyms":[{"name":"cassette array member","type":"exact"}],"termid":"SO:0005847"}


id: PR:O74832
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pet127 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA degradation protein pet127, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.04c","synonyms":[{"name":"Spom972h-pet127","type":"exact"}],"termid":"PR:O74832"}


id: PBO:0089894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent epimerase/dehydratase","termid":"PBO:0089894"}


id: GO:1905760
data:
  {"annotated_genes":["SJAG_02045"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90867],"is_not":false,"summary":null,"term":"GO:1905760"}]},"cv_name":"cellular_component","definition":"Any microtubule end that is part of a post-anaphase array microtubule.","definition_xrefs":["PMID:11007487","GO_REF:0000064","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule end","termid":"GO:1990752"},{"relation_name":"part_of","term_name":"post-anaphase array microtubule","termid":"GO:1905759"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02045":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"post-anaphase array microtubule end","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule end of microtubule of PAA","type":"exact"},{"name":"microtubule end of microtubule of post-anaphase array","type":"exact"},{"name":"microtubule end of microtubule of post-anaphase microtubule array","type":"exact"},{"name":"microtubule end of microtubuli of PAA","type":"exact"},{"name":"microtubule end of microtubuli of post-anaphase array","type":"exact"},{"name":"microtubule end of microtubuli of post-anaphase microtubule array","type":"exact"},{"name":"microtubule end of microtubulus of PAA","type":"exact"},{"name":"microtubule end of microtubulus of post-anaphase array","type":"exact"},{"name":"microtubule end of microtubulus of post-anaphase microtubule array","type":"exact"},{"name":"microtubule end of neurotubule of PAA","type":"narrow"},{"name":"microtubule end of neurotubule of post-anaphase array","type":"narrow"},{"name":"microtubule end of neurotubule of post-anaphase microtubule array","type":"narrow"},{"name":"microtubule end of post-anaphase array microtubule","type":"exact"}],"termid":"GO:1905760","terms_by_termid":{"GO:1905760":null}}


id: MONDO:0008745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculocutaneous albinism type 1A (OCA1A) is the most severe form of OCA, where no melanin is produced, and is characterized by white hair and skin, blue, fully translucent irises, nystagmus and misrouting of the optic nerves.","definition_xrefs":["Orphanet:79431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism type 1","termid":"MONDO:0018135"},{"relation_name":"is_a","term_name":"autosomal recessive ocular albinism","termid":"MONDO:0040653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0006025","MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"oculocutaneous albinism type 1A","secondary_identifiers":["GARD:16721","ICD9:270.2","SCTID:6483008","DOID:0070094","MEDGEN:1643910","NCIT:C168731","OMIM:203100","UMLS:C4551504","icd11.foundation:1168847652"],"synonyms":[{"name":"OCA1A","type":"exact"},{"name":"TYR oculocutaneous albinism","type":"exact"},{"name":"Tyr oculocutaneous albinism","type":"exact"},{"name":"albinism 1","type":"related"},{"name":"albinism, oculocutaneous, type 1A","type":"related"},{"name":"albinism, oculocutaneous, type IA","type":"related"},{"name":"oculocutaneous albinism caused by mutation in TYR","type":"exact"},{"name":"oculocutaneous albinism caused by mutation in Tyr","type":"exact"},{"name":"oculocutaneous albinism type IA","type":"related"},{"name":"oculocutaneous albinism, type 1","type":"related"},{"name":"oculocutaneous albinism, tyrosinase-negative","type":"exact"},{"name":"tyrosinase-negative oculocutaneous albinism","type":"exact"}],"termid":"MONDO:0008745","xrefs":{"Monarch":{"xref_id":"0008745"}}}


id: FYPO:0002299
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable germinated spores with curved germ tubes, and in which some cells divide once and others do not divide. In the cells that divide once, an inviable cell forms from the growing end of the germ tube, but does not divide further.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including divided and undivided germinated spores, with curved germ tubes (obsolete FYPO:0002299)","termid":"FYPO:0002299"}


id: PBO:0068425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein with serine rich domain 1 pseudogene 1","termid":"PBO:0068425"}


id: GO:0032991
data:
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id: GO:0010014
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id: GO:0014818
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id: FYPO:0003674
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id: MONDO:1011585
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id: PBO:0051073
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id: MONDO:0958257
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id: PBO:0081934
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id: GO:0098622
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id: PBO:0030923
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id: PBO:0028494
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id: PBO:0074106
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id: GO:0015629
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id: GO:0102993
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a (9Z,12Z)-octadecadienoyl-containing glycerolipid + 2 H+ + O2 + 2 reduced [2Fe-2S]-[ferredoxin] = (9Z,12Z,15Z)-octadecatrienoyl-containing glycerolipid + 2 H2O + 2 oxidized [2Fe-2S]-[ferredoxin]. Also converts a (7Z,10Z)-hexadecadienoyl-containing glycerolipid into a (7Z,10Z,13Z)-hexadecatrienoyl-containing glycerolipid.","definition_xrefs":["EC:1.14.19.35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"sn-2 acyl-lipid omega-3 desaturase (ferredoxin) activity","secondary_identifiers":["MetaCyc:RXN-9667"],"synonyms":[{"name":"linolenate delta15 desaturase activity","type":"exact"}],"termid":"GO:0102993"}


id: PBO:0064974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 30, pseudogene","termid":"PBO:0064974"}


id: PR:O13810
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutamate 5-kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00832","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate 5-kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.13c","secondary_identifiers":["UniProtKB:O13810"],"synonyms":[{"name":"GK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-proB","type":"exact"},{"name":"gamma-glutamyl kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13810"}


id: GO:1900805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of brevianamide F. Brevianamide F is the biosynthetic precursor of a large family of biologically active prenylated tryptophan-proline 2,5-diketopiperazines that are produced by some fungi.","definition_xrefs":["PMID:16755625","PMID:17464044","GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole alkaloid biosynthetic process","termid":"GO:0035835"},{"relation_name":"is_a","term_name":"indole-containing compound biosynthetic process","termid":"GO:0042435"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"brevianamide F biosynthetic process","secondary_identifiers":["GO:1900803"],"synonyms":[{"name":"C16H17N3O2 anabolism","type":"related"},{"name":"C16H17N3O2 biosynthesis","type":"related"},{"name":"C16H17N3O2 biosynthetic process","type":"related"},{"name":"C16H17N3O2 formation","type":"related"},{"name":"C16H17N3O2 synthesis","type":"related"},{"name":"L-prolyl-L-tryptophan anhydride anabolism","type":"related"},{"name":"L-prolyl-L-tryptophan anhydride biosynthesis","type":"related"},{"name":"L-prolyl-L-tryptophan anhydride biosynthetic process","type":"related"},{"name":"L-prolyl-L-tryptophan anhydride formation","type":"related"},{"name":"L-prolyl-L-tryptophan anhydride synthesis","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride anabolism","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride biosynthesis","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride biosynthetic process","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride formation","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride synthesis","type":"related"},{"name":"brevianamide F anabolism","type":"exact"},{"name":"brevianamide F biosynthesis","type":"exact"},{"name":"brevianamide F formation","type":"exact"},{"name":"brevianamide F metabolic process","type":"narrow"},{"name":"brevianamide F synthesis","type":"exact"},{"name":"cyclo-(Trp-Pro) anabolism","type":"related"},{"name":"cyclo-(Trp-Pro) biosynthesis","type":"related"},{"name":"cyclo-(Trp-Pro) biosynthetic process","type":"related"},{"name":"cyclo-(Trp-Pro) formation","type":"related"},{"name":"cyclo-(Trp-Pro) synthesis","type":"related"},{"name":"cyclo-L-Trp-L-Pro anabolism","type":"related"},{"name":"cyclo-L-Trp-L-Pro biosynthesis","type":"related"},{"name":"cyclo-L-Trp-L-Pro biosynthetic process","type":"related"},{"name":"cyclo-L-Trp-L-Pro formation","type":"related"},{"name":"cyclo-L-Trp-L-Pro synthesis","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline anabolism","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline biosynthesis","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline biosynthetic process","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline formation","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline synthesis","type":"related"},{"name":"tryptophan-proline diketopiperazine anabolism","type":"related"},{"name":"tryptophan-proline diketopiperazine biosynthesis","type":"related"},{"name":"tryptophan-proline diketopiperazine biosynthetic process","type":"related"},{"name":"tryptophan-proline diketopiperazine formation","type":"related"},{"name":"tryptophan-proline diketopiperazine synthesis","type":"related"}],"termid":"GO:1900805"}


id: PR:Q9USG9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tyrosyl-DNA phosphodiesterase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04352","PANTHER:PTHR12415:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosyl-DNA phosphodiesterase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP31B10.05","secondary_identifiers":["UniProtKB:Q9USG9"],"synonyms":[{"name":"Spom972h-TDP1","type":"exact"},{"name":"Tyr-DNA phosphodiesterase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USG9"}


id: PBO:0057472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 590","termid":"PBO:0057472"}


id: MONDO:0019285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A nail anomaly that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"gene_count":0,"genotype_count":0,"name":"obsolete syndromic nail anomaly (obsolete MONDO:0019285)","secondary_identifiers":["Orphanet:79370"],"synonyms":[{"name":"syndrome associated with nail anomaly","type":"exact"},{"name":"syndromic nail anomaly","type":"exact"}],"termid":"MONDO:0019285","xrefs":{"Monarch":{"xref_id":"0019285"}}}


id: MONDO:0100422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly RUNX1 gene mutation. (A change in the nucleotide sequence of the RUNX1 gene.)","definition_xrefs":["NCIT:C38362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"acute myeloid leukemia, RUNX1 gene mutation","secondary_identifiers":["DOID:0081091","NCIT:C129786"],"synonyms":[{"name":"AML, AML1 Gene Mutation","type":"exact"},{"name":"AML, AML1 Mutation","type":"exact"},{"name":"AML, AMLCR1 Gene Mutation","type":"exact"},{"name":"AML, Acute Myeloid Leukaemia 1 Gene Mutation","type":"exact"},{"name":"AML, Acute Myeloid Leukemia 1 Gene Mutation","type":"exact"},{"name":"AML, CBFA2 Gene Mutation","type":"exact"},{"name":"AML, CBFalpha2 Mutation","type":"exact"},{"name":"AML, RUNX1 gene mutation","type":"exact"},{"name":"AML, Runt-Related Transcription Factor 1 Gene Mutation","type":"exact"}],"termid":"MONDO:0100422","xrefs":{"Monarch":{"xref_id":"0100422"}}}


id: MONDO:0005947
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pneumonia caused by infection with bacteria of the family rickettsiaceae.","definition_xrefs":["MESH:D011022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rickettsiaceae infectious disease","termid":"MONDO:0006927"},{"relation_name":"is_a","term_name":"pneumonia caused by gram negative bacteria","termid":"MONDO:0041850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rickettsial pneumonia","secondary_identifiers":["UMLS:C0032307","ICD9:484.8","MEDGEN:45973","SCTID:233621003"],"synonyms":[{"name":"Rickettsiaceae caused pneumonia","type":"exact"},{"name":"Rickettsiaceae pneumonia","type":"exact"}],"termid":"MONDO:0005947","xrefs":{"Monarch":{"xref_id":"0005947"}}}


id: MONDO:0016622
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Melhem-Fahl syndrome was described in two siblings born to consanguineous parents in 1985 and was characterized by the presence of 15 dorsal vertebrae and rib pairs. No other cases have been documented since the initial report.","definition_xrefs":["Orphanet:2482"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Melhem-Fahl syndrome","secondary_identifiers":["MESH:C537238","SCTID:732263008","UMLS:C2931453","GARD:3462","icd11.foundation:999539082","MEDGEN:444059"],"synonyms":[{"name":"Melhem Fahl syndrome","type":"related"},{"name":"fifteen dorsal vertebrae and rib pairs","type":"related"}],"termid":"MONDO:0016622","xrefs":{"Monarch":{"xref_id":"0016622"}}}


id: PR:O94603
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- epe1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94603"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JmjC domain-containing histone demethylation protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.16c","synonyms":[{"name":"Spom972h-epe1","type":"exact"},{"name":"[Histone-H3]-lysine-36 demethylase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"heterochromatin-destabilizing protein epe1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94603"}


id: GO:0000184
data:
  {"annotated_genes":["SJAG_04360","SJAG_03223","SJAG_03886","SJAG_00226","SJAG_03805","SJAG_05276","SJAG_01521","SJAG_00854","SJAG_04118","SJAG_04818","SJAG_03276","SJAG_01218","SJAG_00507","SJAG_01252","SJAG_05014","SJAG_04084","SJAG_01818","SJAG_04153","SJAG_03179","SJAG_04321","SJAG_04006","SJAG_01830","SJAG_04824","SJAG_04056"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89276,89380,89790,91007,99273,104255,105382,113076,114874],"is_not":false,"summary":null,"term":"GO:0000184"},{"annotations":[106950,91006,104756,89275,117801,101585,100736,95405,115384,115647,105958,116723,88231,96740,92558,103907,108313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070478"}]},"cv_name":"biological_process","definition":"The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins.","definition_xrefs":["PMID:10025395","GOC:krc","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear-transcribed mRNA catabolic process","termid":"GO:0000956"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00226":null,"SJAG_00507":null,"SJAG_00854":null,"SJAG_01218":null,"SJAG_01252":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_01830":null,"SJAG_03179":null,"SJAG_03223":null,"SJAG_03276":null,"SJAG_03805":null,"SJAG_03886":null,"SJAG_04006":null,"SJAG_04056":null,"SJAG_04084":null,"SJAG_04118":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04360":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_05014":null,"SJAG_05276":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016071"],"is_obsolete":false,"name":"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-927802","Wikipedia:Nonsense-mediated_mRNA_decay","Wikipedia:Nonsense-mediated_decay"],"synonyms":[{"name":"mRNA breakdown, nonsense-mediated decay","type":"exact"},{"name":"mRNA catabolic process, nonsense-mediated","type":"exact"},{"name":"mRNA catabolism, nonsense-mediated","type":"exact"},{"name":"mRNA degradation, nonsense-mediated decay","type":"exact"},{"name":"nonsense-mediated mRNA decay","type":"exact"},{"name":"nuclear mRNA catabolic process, nonsense-mediated decay","type":"exact"}],"termid":"GO:0000184","terms_by_termid":{"GO:0000184":null,"GO:0070478":null}}


id: GO:0102955
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-demethylmenaquinol-7 + S-adenosyl-L-methionine = menaquinol-7 + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["PMID:1444716","PMID:9045837","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete S-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase activity (obsolete GO:0102955)","termid":"GO:0102955"}


id: MONDO:0100001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An IgE antibody response to a mammalian oligosaccharide epitope, galactose-alpha-1,3-galactose (alpha-gal).","definition_xrefs":["PMID:25747720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allergic disease","termid":"MONDO:0005271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"alpha-gal syndrome","secondary_identifiers":["UMLS:C5442181","MEDGEN:1778444"],"synonyms":[{"name":"AGS","type":"exact"},{"name":"allergic galactose-alpha-1,3-galactose disease","type":"exact"},{"name":"alpha-gal allergy","type":"exact"},{"name":"red meat allergy","type":"exact"},{"name":"tick bite meat allergy","type":"exact"}],"termid":"MONDO:0100001","xrefs":{"Monarch":{"xref_id":"0100001"}}}


id: GO:0140704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 3',2' cyclic GMP-AMP (cGAMP) nucleotide, a cyclic purine dinucleotide that consists of AMP and GMP units cyclized via 3',5' and 2',5' linkages.","definition_xrefs":["PMID:34261127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"3',2'-cyclic GMP-AMP binding","synonyms":[{"name":"3',2' cyclic-GMP-AMP binding","type":"exact"},{"name":"3',2'-cGAMP binding","type":"exact"},{"name":"3',2'-cyclic GAMP binding","type":"exact"}],"termid":"GO:0140704"}


id: GO:1900682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of octadecene.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene biosynthetic process","termid":"GO:0043450"},{"relation_name":"is_a","term_name":"octadecene metabolic process","termid":"GO:1900681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"octadecene biosynthetic process","synonyms":[{"name":"1-octadecene biosynthetic process","type":"exact"},{"name":"octadecene anabolism","type":"exact"},{"name":"octadecene biosynthesis","type":"exact"},{"name":"octadecene formation","type":"exact"},{"name":"octadecene synthesis","type":"exact"}],"termid":"GO:1900682"}


id: GO:1900966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of methanophenazine metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of methanophenazine metabolic process","termid":"GO:1900965"},{"relation_name":"negatively_regulates","term_name":"methanophenazine metabolic process","termid":"GO:1900629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of methanophenazine metabolic process","synonyms":[{"name":"down regulation of methanophenazine metabolic process","type":"exact"},{"name":"down regulation of methanophenazine metabolism","type":"exact"},{"name":"down-regulation of methanophenazine metabolic process","type":"exact"},{"name":"down-regulation of methanophenazine metabolism","type":"exact"},{"name":"downregulation of methanophenazine metabolic process","type":"exact"},{"name":"downregulation of methanophenazine metabolism","type":"exact"},{"name":"inhibition of methanophenazine metabolic process","type":"narrow"},{"name":"inhibition of methanophenazine metabolism","type":"exact"},{"name":"negative regulation of methanophenazine metabolism","type":"exact"}],"termid":"GO:1900966"}


id: GO:0052438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of callose deposition by the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of defense-related symbiont callose deposition (obsolete GO:0052438)","synonyms":[{"name":"modulation by organism of defense-related symbiont callose deposition","type":"exact"}],"termid":"GO:0052438"}


id: GO:0047289
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-diacyl-3-beta-D-galactosyl-sn-glycerol + CMP-N-acetyl-beta-neuraminate = 1,2-diacyl-3-[3-(alpha-D-N-acetylneuraminyl)-beta-D-galactosyl]-sn-glycerol + CMP + H+.","definition_xrefs":["EC:2.4.3.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialyltransferase activity","termid":"GO:0008373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"galactosyldiacylglycerol alpha-2,3-sialyltransferase activity","secondary_identifiers":["MetaCyc:2.4.99.5-RXN","RHEA:11664","KEGG_REACTION:R03468"],"termid":"GO:0047289"}


id: GO:0036493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, or increases the frequency, rate or extent of translation as a result of endoplasmic reticulum stress.","definition_xrefs":["GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translation in response to stress","termid":"GO:0032056"},{"relation_name":"is_a","term_name":"regulation of translation in response to endoplasmic reticulum stress","termid":"GO:0036490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of translation in response to endoplasmic reticulum stress","synonyms":[{"name":"positive regulation of translation in response to ER stress","type":"exact"}],"termid":"GO:0036493"}


id: MONDO:0000661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An agnosia that is a deficiency in understanding, processing, or describing emotions.","definition_xrefs":["DOID:0060131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"agnosia","termid":"MONDO:0005638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alexithymia","secondary_identifiers":["UMLS:C0002020","MEDGEN:194"],"termid":"MONDO:0000661","xrefs":{"Monarch":{"xref_id":"0000661"}}}


id: MONDO:0010867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"PARC syndrome is a rare genetic developmental defect during embryogenesis syndrome characterized by the association of congenital poikiloderma (P), generalized alopecia (A), retrognathism (R) and cleft palate (C). There have been no further descriptions in the literature since 1990.","definition_xrefs":["Orphanet:2825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARC syndrome","secondary_identifiers":["MESH:C537174","GARD:4223","MEDGEN:373923","UMLS:C1838256","OMIM:600331"],"synonyms":[{"name":"PARC syndrome","type":"exact"},{"name":"poikiloderma, alopecia, retrognathism, and cleft palate","type":"related"},{"name":"poikiloderma-alopecia-retrognathism-cleft palate syndrome","type":"exact"}],"termid":"MONDO:0010867","xrefs":{"Monarch":{"xref_id":"0010867"}}}


id: MONDO:0008999
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cohen syndrome (CS) is a rare genetic developmental disorder characterized by microcephaly, characteristic facial features, hypotonia, non-progressive intellectual deficit, myopia and retinal dystrophy, neutropenia and truncal obesity.","definition_xrefs":["Orphanet:193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"constitutional neutropenia","termid":"MONDO:0015134"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0002320"],"is_obsolete":false,"name":"Cohen syndrome","secondary_identifiers":["MedDRA:10049066","NORD:986","OMIM:216550","MEDGEN:78539","DOID:0111590","NANDO:2200750","SCTID:56604005","GARD:6126","UMLS:C0265223","icd11.foundation:1188737383","ICD9:759.89","MESH:C536438"],"synonyms":[{"name":"COH1","type":"related"},{"name":"Chs1","type":"related"},{"name":"Chs1, formerly","type":"related"},{"name":"Coh","type":"related"},{"name":"Cohen syndrome","type":"exact"},{"name":"cutis verticis gyrata, retinitis pigmentosa, and sensorineural deafness","type":"exact"},{"name":"hypotonia, obesity, and prominent incisors","type":"related"},{"name":"pepper syndrome","type":"related"}],"termid":"MONDO:0008999","xrefs":{"Monarch":{"xref_id":"0008999"}}}


