# terms

id: MONDO:0859516
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with seizures, spasticity, and complete or partial agenesis of the corpus callosum","secondary_identifiers":["MEDGEN:1840932","OMIM:620250","UMLS:C5830296"],"termid":"MONDO:0859516","xrefs":{"Monarch":{"xref_id":"0859516"}}}


id: PBO:0043990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colony stimulating factor 3 receptor","termid":"PBO:0043990"}


id: GO:1905581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of low-density lipoprotein particle clearance.","definition_xrefs":["GO_REF:0000058","GOC:nc","PMID:22848640","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipoprotein particle clearance","termid":"GO:0010986"},{"relation_name":"is_a","term_name":"regulation of low-density lipoprotein particle clearance","termid":"GO:0010988"},{"relation_name":"positively_regulates","term_name":"low-density lipoprotein particle clearance","termid":"GO:0034383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of low-density lipoprotein particle clearance","synonyms":[{"name":"activation of LDL clearance","type":"narrow"},{"name":"activation of low-density lipoprotein particle clearance","type":"narrow"},{"name":"positive regulation of LDL clearance","type":"exact"},{"name":"up regulation of LDL clearance","type":"exact"},{"name":"up regulation of low-density lipoprotein particle clearance","type":"exact"},{"name":"up-regulation of LDL clearance","type":"exact"},{"name":"up-regulation of low-density lipoprotein particle clearance","type":"exact"},{"name":"upregulation of LDL clearance","type":"exact"},{"name":"upregulation of low-density lipoprotein particle clearance","type":"exact"}],"termid":"GO:1905581"}


id: PBO:0088348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent reductase for Dph3, Cbr1","termid":"PBO:0088348"}


id: PBO:0054036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1370","termid":"PBO:0054036"}


id: GO:0015312
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + polyamine(in) = H+(in) + polyamine(out).","definition_xrefs":["TC:2.A.1.2.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"polyamine transmembrane transporter activity","termid":"GO:0015203"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"polyamine:proton antiporter activity","synonyms":[{"name":"polyamine:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015312"}


id: MONDO:0024639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated neuroendocrine tumor that arises from the stomach. It produces serotonin and it may occasionally be found in association with a carcinoid syndrome.","definition_xrefs":["NCIT:C27443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric neuroendocrine tumor, well differentiated, low or intermediate grade","termid":"MONDO:0015062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastric enterochromaffin cell serotonin-producing neuroendocrine tumor","secondary_identifiers":["UMLS:C3274137","MEDGEN:475770"],"synonyms":[{"name":"gastric EC cell serotonin-producing NET","type":"exact"},{"name":"gastric EC-cell serotonin-producing neuroendocrine tumor","type":"exact"},{"name":"gastric EC-cell serotonin-producing neuroendocrine tumour","type":"exact"},{"name":"gastric enterochromaffin cell serotonin-producing neuroendocrine tumor","type":"exact"}],"termid":"MONDO:0024639","xrefs":{"Monarch":{"xref_id":"0024639"}}}


id: FYPO:0007930
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of phloxine B and hydrogen peroxide. Cells stop growing (and may die) at concentrations of phloxine B and hydrogen peroxide that allow wild type cells to grow.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to phloxine B and hydrogen peroxide","termid":"FYPO:0007930"}


id: PR:O42984
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1701 gene.","definition_xrefs":["UniProtKB:O42984","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S17-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.05c","synonyms":[{"name":"Spom972h-rps1701","type":"exact"}],"termid":"PR:O42984"}


id: PBO:0048804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha z","termid":"PBO:0048804"}


id: SO:0002353
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene encoding a stem-bulge RNA.","definition_xrefs":["PMID:30666901","PMID:25908866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sbRNA_gene","synonyms":[{"name":"Stem-bulge RNA gene","type":"exact"},{"name":"stem_bulge_RNA_gene","type":"exact"}],"termid":"SO:0002353"}


id: GO:0090062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of trehalose metabolism, the chemical reactions and pathways involving trehalose, a disaccharide that consists of two molecules of glucose and is isomeric with sucrose.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate metabolic process","termid":"GO:0006109"},{"relation_name":"regulates","term_name":"trehalose metabolic process","termid":"GO:0005991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of trehalose metabolic process","termid":"GO:0090062"}


id: PBO:0054897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2311","termid":"PBO:0054897"}


id: PBO:0044064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin 9 like","termid":"PBO:0044064"}


id: GO:0060340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of a type I interferon-mediated signaling pathway.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"},{"relation_name":"is_a","term_name":"regulation of type I interferon-mediated signaling pathway","termid":"GO:0060338"},{"relation_name":"positively_regulates","term_name":"type I interferon-mediated signaling pathway","termid":"GO:0060337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of type I interferon-mediated signaling pathway","synonyms":[{"name":"positive regulation of type I interferon-mediated signalling pathway","type":"exact"}],"termid":"GO:0060340"}


id: FYPO:0000481
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic recombination is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination during vegetative growth","termid":"FYPO:0001345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic recombination","synonyms":[{"name":"abnormal mitotic recombination during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic recombination during vegetative growth","type":"exact"},{"name":"mitotic recombination: abnormal","type":"related"}],"termid":"FYPO:0000481"}


id: PBO:0049550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 12 like","termid":"PBO:0049550"}


id: MONDO:1011089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal dysplasia that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal dysplasia, non-human animal","termid":"MONDO:1010268"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal dysplasia, horse","secondary_identifiers":["OMIA:001135-9796"],"termid":"MONDO:1011089","xrefs":{"Monarch":{"xref_id":"1011089"}}}


id: MONDO:0020062
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chromosome X structural anomaly (obsolete MONDO:0020062)","secondary_identifiers":["Orphanet:98159"],"termid":"MONDO:0020062","xrefs":{"Monarch":{"xref_id":"0020062"}}}


id: MONDO:0000164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete corneal dystrophy, Fuchs endothelial (obsolete MONDO:0000164)","termid":"MONDO:0000164","xrefs":{"Monarch":{"xref_id":"0000164"}}}


id: GO:0030733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a fatty acid = S-adenosyl-L-homocysteine + a fatty acid methyl ester.","definition_xrefs":["EC:2.1.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"fatty acid O-methyltransferase activity","secondary_identifiers":["MetaCyc:FATTY-ACID-O-METHYLTRANSFERASE-RXN","RHEA:23012"],"synonyms":[{"name":"S-adenosyl-L-methionine:fatty-acid O-methyltransferase activity","type":"related"},{"name":"fatty acid methyltransferase activity","type":"related"},{"name":"fatty-acid O-methyltransferase activity","type":"exact"}],"termid":"GO:0030733"}


id: PBO:0039634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amine oxidase copper containing 2","termid":"PBO:0039634"}


id: PBO:0031789
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_fusion_during_conjugation","termid":"PBO:0031789"}


id: MONDO:0015162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare syndromic intellectual disability.","gene_count":0,"genotype_count":0,"name":"obsolete rare syndromic intellectual disability (obsolete MONDO:0015162)","secondary_identifiers":["Orphanet:102369"],"synonyms":[{"name":"rare syndromic intellectual disability","type":"exact"}],"termid":"MONDO:0015162","xrefs":{"Monarch":{"xref_id":"0015162"}}}


id: PR:Q96WV4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An androgen-induced gene 1 protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02556","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0641 membrane protein PJ4664.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPJ4664.05","secondary_identifiers":["UniProtKB:Q96WV4"],"synonyms":[{"name":"Spom972h-AIG1","type":"exact"}],"termid":"PR:Q96WV4"}


id: PBO:0042068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC137 pseudogene 1","termid":"PBO:0042068"}


id: GO:0061701
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spherical, bilayered proteolipid vesicle released from gram-negative bacterial outer membranes.","definition_xrefs":["PMID:20596524","GOC:dph","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular vesicle","termid":"GO:1903561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"bacterial outer membrane vesicle","termid":"GO:0061701"}


id: GO:0097301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that regulates the internal concentration of potassium ions at the level of a cell by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:20412803","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of potassium ion concentration by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0097301)","synonyms":[{"name":"cellular potassium ion homeostasis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"potassium ion homeostasis by positive regulation of transcription from RNA polymerase II promoter","type":"broad"}],"termid":"GO:0097301"}


id: PBO:0038760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3B pseudogene 5","termid":"PBO:0038760"}


id: MONDO:1011165
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteoarthritis that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteoarthritis, non-human animal","termid":"MONDO:1010297"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoarthritis, sheep","secondary_identifiers":["OMIA:000747-9940"],"termid":"MONDO:1011165","xrefs":{"Monarch":{"xref_id":"1011165"}}}


id: PBO:0011953
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-component_or_sequence","termid":"PBO:0011953"}


id: PBO:0080108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP25 small subunit processome component","termid":"PBO:0080108"}


id: GO:0150075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of protein-glutamine gamma-glutamyltransferase activity.","definition_xrefs":["GOC:aruk","GOC:bc"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of protein-glutamine gamma-glutamyltransferase activity (obsolete GO:0150075)","termid":"GO:0150075"}


id: MONDO:0003596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of well differentiated liposarcoma characterized by the presence of bland spindle cells and lipoblasts within a myxoid or fibrous stroma.","definition_xrefs":["NCIT:C27489"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"atypical lipomatous tumor","termid":"MONDO:0006097"},{"relation_name":"is_a","term_name":"spindle cell sarcoma","termid":"MONDO:0002927"},{"relation_name":"is_a","term_name":"well-differentiated liposarcoma","termid":"MONDO:0005103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"spindle cell liposarcoma","secondary_identifiers":["MEDGEN:266156","UMLS:C1275275","ICD9:171.9","SCTID:404073009","DOID:5705"],"synonyms":[{"name":"spindle cell liposarcoma","type":"exact"}],"termid":"MONDO:0003596","xrefs":{"Monarch":{"xref_id":"0003596"}}}


id: GO:0032189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an actomyosin contractile ring is maintained in a location and prevented from moving elsewhere.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete maintenance of actomyosin contractile ring localization (obsolete GO:0032189)","synonyms":[{"name":"cytokinetic ring anchoring","type":"related"},{"name":"maintenance of contractile ring localisation involved in cell cycle cytokinesis","type":"exact"},{"name":"maintenance of contractile ring localization involved in cell cycle cytokinesis","type":"exact"},{"name":"maintenance of contractile ring localization involved in cytokinesis during cell cycle","type":"related"}],"termid":"GO:0032189"}


id: PBO:0084011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycogen phosphorylase required for the mobilization of glycogen; non-essential; regulated by cyclic AMP-mediated phosphorylation; phosphorylation by Cdc28p may coordinately regulate carbohydrate metabolism and the cell cycle; expression is regulated by stress-response elements and by the HOG MAP kinase pathway","termid":"PBO:0084011"}


id: GO:0050046
data:
  {"annotated_genes":["SJAG_03509","SJAG_00717"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89137,107021],"is_not":false,"summary":null,"term":"GO:0050046"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a delta(7)-sterol + 2 ferrocytochrome b5 + O2 + 2 H+ -> a delta(5,7)-sterol + 2 ferricytochrome b5 + 2 H2O.","definition_xrefs":["RHEA:54320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol desaturase activity","termid":"GO:0070704"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00717":null,"SJAG_03509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"delta7-sterol 5(6)-desaturase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-16378","EC:1.14.19.20"],"synonyms":[{"name":"5-DES","type":"related"},{"name":"delta7-sterol 5-desaturase activity","type":"related"},{"name":"delta7-sterol delta5-dehydrogenase activity","type":"related"},{"name":"delta7-sterol-C5(6)-desaturase activity","type":"related"},{"name":"lathosterol 5-desaturase activity","type":"related"},{"name":"lathosterol oxidase activity","type":"exact"}],"termid":"GO:0050046","terms_by_termid":{"GO:0050046":null}}


id: GO:0000701
data:
  {"annotated_genes":["SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94356],"is_not":false,"summary":null,"term":"GO:0000701"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of purines present in mismatches, especially opposite oxidized purines, by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic (AP) site.","definition_xrefs":["PMID:9224623","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch base pair DNA N-glycosylase activity","termid":"GO:0000700"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140097","GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"purine-specific mismatch base pair DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.2.2.31"],"synonyms":[{"name":"A/G-specific adenine DNA glycosylase activity","type":"narrow"}],"termid":"GO:0000701","terms_by_termid":{"GO:0000701":null}}


id: GO:0042979
data:
  {"annotated_genes":["SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008073"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of the enzyme ornithine decarboxylase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"ornithine decarboxylase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042979","terms_by_termid":{"GO:0008073":null}}


id: GO:0061278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of epithelial cells within a renal tubule that contributes to mesonephric nephron tubule morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration involved in nephron tubule morphogenesis","termid":"GO:0072155"},{"relation_name":"part_of","term_name":"mesonephric nephron tubule morphogenesis","termid":"GO:0061240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell migration involved in mesonephric nephron tubule morphogenesis","termid":"GO:0061278"}


id: MONDO:0700042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete X-linked mendelian susceptibility to mycobacterial diseases due to IKBKG deficiency (obsolete MONDO:0700042)","termid":"MONDO:0700042","xrefs":{"Monarch":{"xref_id":"0700042"}}}


id: PBO:0085514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S15 and bacterial S19","termid":"PBO:0085514"}


id: PBO:0058828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8058","termid":"PBO:0058828"}


id: MONDO:0024645
data:
  {"annotated_genes":["SJAG_00260","SJAG_01671","SJAG_01895"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011121"},{"annotations":[85121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007273"},{"annotations":[85330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013602"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the retroperitoneum.","definition_xrefs":["NCIT:C3357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null,"SJAG_01895":null},"genotype_count":0,"is_obsolete":false,"name":"retroperitoneal neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0035358","MEDGEN:48439"],"synonyms":[{"name":"neoplasm of retroperitoneal space","type":"exact"},{"name":"retroperitoneal neoplasm","type":"exact"},{"name":"retroperitoneal space neoplasm","type":"exact"},{"name":"retroperitoneal space tumor","type":"exact"},{"name":"retroperitoneal space tumour","type":"exact"},{"name":"tumor of retroperitoneal space","type":"exact"},{"name":"tumour of retroperitoneal space","type":"exact"}],"termid":"MONDO:0024645","terms_by_termid":{"MONDO:0007273":null,"MONDO:0011121":null,"MONDO:0013602":null},"xrefs":{"Monarch":{"xref_id":"0024645"}}}


id: PBO:0038501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 10","termid":"PBO:0038501"}


id: PBO:0005873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Serine, mitochondrial","termid":"PBO:0005873"}


id: RO:0002414
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"transitive form of directly_provides_input_for","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of","termid":"RO:0002411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transitively_provides_input_for","termid":"RO:0002414"}


id: PBO:0038416
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-acts_upstream_of_or_within,_negative_effect","termid":"PBO:0038416"}


id: PBO:0030365
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multinucleate_multiseptate_vegetative_cell,_septa_grouped","termid":"PBO:0030365"}


id: MONDO:0017332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyoderma gangrenosum-acne-suppurative hidradenitis syndrome","secondary_identifiers":["MEDGEN:1681766","GARD:21139","UMLS:C5191642","Orphanet:289478"],"synonyms":[{"name":"pash syndrome","type":"exact"}],"termid":"MONDO:0017332","xrefs":{"Monarch":{"xref_id":"0017332"}}}


id: PBO:0067165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 218, pseudogene","termid":"PBO:0067165"}


id: MONDO:0003610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An exceptionally rare cystadenoma that arises from the rete ovarii.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rete ovarii adenoma","termid":"MONDO:0004005"},{"relation_name":"is_a","term_name":"ovarian cystadenoma","termid":"MONDO:0005183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rete ovarii cystadenoma","secondary_identifiers":["UMLS:C1514907","NCIT:C40019","MEDGEN:308160","DOID:5725"],"synonyms":[{"name":"rete ovarii cystadenoma","type":"exact"}],"termid":"MONDO:0003610","xrefs":{"Monarch":{"xref_id":"0003610"}}}


id: MONDO:0018979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multifocal motor neuropathy (MMN) is a rare acquired immune-mediatedneuropathy characterized clinically by a purely motor deficit with conduction block and asymmetric multifocal weakness, fasciculations, and cramping.","definition_xrefs":["Orphanet:641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired peripheral neuropathy","termid":"MONDO:0015923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"multifocal motor neuropathy","secondary_identifiers":["GARD:11011","NANDO:1200031","NORD:1952","SCTID:230591002","ICD10CM:G61.82","UMLS:C0393847","MEDGEN:581615","ICD9:357.89"],"synonyms":[{"name":"MMN","type":"exact"},{"name":"MMNCB","type":"exact"},{"name":"multifocal motor neuropathy with conduction block","type":"exact"}],"termid":"MONDO:0018979","xrefs":{"Monarch":{"xref_id":"0018979"}}}


id: GO:0070557
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the cyclin-dependent protein kinase inhibitor p21WAF1/CIP1 bound to PCNA; formation of the complex inhibits DNA replication.","definition_xrefs":["PMID:7915843","GOC:mah","PMID:7911228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"PCNA-p21 complex","termid":"GO:0070557"}


id: GO:0070303
data:
  {"annotated_genes":["SJAG_04522","SJAG_05000","SJAG_01114","SJAG_04825","SJAG_02392","SJAG_03263"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95338,106534,98940,117813,103303,107100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signaling via the stress-activated protein kinase signaling cascade.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stress-activated protein kinase signaling cascade","termid":"GO:0070302"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"stress-activated protein kinase signaling cascade","termid":"GO:0031098"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01114":null,"SJAG_02392":null,"SJAG_03263":null,"SJAG_04522":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of stress-activated protein kinase signaling cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of stress-activated protein kinase signaling pathway","type":"exact"},{"name":"down-regulation of stress-activated protein kinase signaling pathway","type":"exact"},{"name":"downregulation of stress-activated protein kinase signaling pathway","type":"exact"},{"name":"inhibition of stress-activated protein kinase signaling pathway","type":"narrow"},{"name":"negative regulation of SAPK signaling pathway","type":"exact"},{"name":"negative regulation of stress-activated protein kinase signaling pathway","type":"exact"},{"name":"negative regulation of stress-activated protein kinase signalling pathway","type":"exact"}],"termid":"GO:0070303","terms_by_termid":{"GO:1903138":null}}


id: MONDO:0005460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute viral respiratory infection caused by a strain of influenza virus which is endemic in swine (pigs). Rarely reported in humans prior to 2009, the disease is caused by a mutated strain of swine influenza A (H1N1) virus. It is highly contagious and spreads mainly through coughing and sneezing. Signs and symptoms include fever, chills, coughing, sore throat headache, muscle ache, and generalized weakness. Antiviral medications are most effective in the first two days of the illness.","definition_xrefs":["NCIT:C80444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"influenza","termid":"MONDO:0005812"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swine influenza","secondary_identifiers":["EFO:0005226","SCTID:442696006","MEDGEN:1385137","UMLS:C0276357","DOID:0050211"],"synonyms":[{"name":"H1N1 Influenza","type":"exact"},{"name":"H1N1 Virus infection","type":"exact"},{"name":"H1N1 flu","type":"exact"},{"name":"Influenza A (H1N1)","type":"exact"},{"name":"Influenza A (H1N1) Virus infection","type":"exact"},{"name":"Swine influenza virus caused influenza","type":"exact"},{"name":"Swine influenza virus influenza","type":"exact"},{"name":"swine flu","type":"exact"}],"termid":"MONDO:0005460","xrefs":{"Monarch":{"xref_id":"0005460"}}}


id: PBO:0060538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase pseudogene","termid":"PBO:0060538"}


id: MONDO:0001806
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that arises from the squamous epithelium of the vagina. Representative examples include condyloma acuminatum, squamous papilloma, and squamous cell carcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell neoplasm","termid":"MONDO:0002532"},{"relation_name":"is_a","term_name":"vaginal neoplasm","termid":"MONDO:0021050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaginal squamous tumor","secondary_identifiers":["MEDGEN:274381","DOID:138","UMLS:C1519931","NCIT:C40242"],"synonyms":[{"name":"vagina squamous cell neoplasm","type":"exact"},{"name":"vaginal squamous neoplasm","type":"exact"},{"name":"vaginal squamous tumor","type":"exact"}],"termid":"MONDO:0001806","xrefs":{"Monarch":{"xref_id":"0001806"}}}


id: GO:0018157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl serine-peptidyl glycine, or peptidyl cysteine-peptidyl glycine cross-link by the condensation of the serine hydroxyl or cysteine thiol with the carbonyl of the preceding residue and alpha-beta dehydrogenation.","definition_xrefs":["GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via an oxazole or thiazole (obsolete GO:0018157)","synonyms":[{"name":"peptide heterocycle biosynthesis","type":"related"},{"name":"peptide heterocycle biosynthetic process","type":"related"},{"name":"peptide heterocycle formation","type":"related"},{"name":"peptide heterocycle synthesis","type":"related"}],"termid":"GO:0018157"}


id: PBO:0063891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class P pseudogene 4","termid":"PBO:0063891"}


id: PBO:0031047
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_acetylation","termid":"PBO:0031047"}


id: MONDO:0009759
data:
  {"annotated_genes":["SJAG_04699","SJAG_01082"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86268,86269],"is_not":false,"summary":null,"term":"MONDO:0009759"}]},"cv_name":"mondo","definition":"Any mosaic variegated aneuploidy syndrome in which the cause of the disease is a mutation in the BUB1B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mosaic variegated aneuploidy syndrome","termid":"MONDO:0000141"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_04699":null},"genotype_count":0,"is_obsolete":false,"name":"mosaic variegated aneuploidy syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:338026","OMIM:257300","UMLS:C1850343","DOID:0080141"],"synonyms":[{"name":"BUB1B mosaic variegated aneuploidy syndrome","type":"exact"},{"name":"MOSAIC variegated aneuploidy syndrome 1","type":"related"},{"name":"MVA syndrome","type":"related"},{"name":"MVA1","type":"related"},{"name":"Mosaic variegated aneuploidy syndrome type 1","type":"exact"},{"name":"mosaic variegated aneuploidy syndrome 1","type":"exact"},{"name":"mosaic variegated aneuploidy syndrome caused by mutation in BUB1B","type":"exact"},{"name":"mosaic variegated aneuploidy syndrome type 1","type":"exact"}],"termid":"MONDO:0009759","terms_by_termid":{"MONDO:0009759":null},"xrefs":{"Monarch":{"xref_id":"0009759"}}}


id: MONDO:0033635
data:
  {"annotated_genes":["SJAG_03173"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85221],"is_not":false,"summary":null,"term":"MONDO:0033635"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex IV deficiency, nuclear-type","termid":"MONDO:0033885"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03173":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 4 deficiency, nuclear type 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070492","OMIM:619046","MEDGEN:1764816","GARD:16404","UMLS:C5436682"],"synonyms":[{"name":"MC4DN3","type":"exact"},{"name":"mitochondrial complex IV deficiency, nuclear type 3","type":"exact"}],"termid":"MONDO:0033635","terms_by_termid":{"MONDO:0033635":null},"xrefs":{"Monarch":{"xref_id":"0033635"}}}


id: PBO:0046153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELAV like RNA binding protein 1","termid":"PBO:0046153"}


id: PBO:0054807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2220","termid":"PBO:0054807"}


id: PBO:0069301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 557, pseudogene","termid":"PBO:0069301"}


id: PBO:0045551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUSP5 divergent transcript","termid":"PBO:0045551"}


id: GO:0098638
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any laminin protein binding that occurs as part of cell-matrix adhesion.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin binding","termid":"GO:0043236"},{"relation_name":"is_a","term_name":"cell-matrix adhesion mediator activity","termid":"GO:0098634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0098631"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674","GO:0098631"],"is_obsolete":false,"name":"laminin binding involved in cell-matrix adhesion","termid":"GO:0098638"}


id: GO:0047901
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: formyl-CoA + H2O = CoA + formate + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete formyl-CoA hydrolase activity (obsolete GO:0047901)","synonyms":[{"name":"formyl coenzyme A hydrolase activity","type":"related"}],"termid":"GO:0047901"}


id: MONDO:0002073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor that arises in the pineal region. Representative examples include germinoma, immature teratoma, choriocarcinoma, embryonal carcinoma and yolk sac tumor.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system germ cell tumor","termid":"MONDO:0003000"},{"relation_name":"is_a","term_name":"extragonadal germ cell cancer","termid":"MONDO:0003113"},{"relation_name":"is_a","term_name":"pineal gland cancer","termid":"MONDO:0003249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant pineal area germ cell neoplasm","secondary_identifiers":["MEDGEN:233159","SCTID:277508009","DOID:1660","ICD9:239.7","UMLS:C1334612","NCIT:C6767"],"synonyms":[{"name":"malignant germ cell neoplasm of pineal gland","type":"exact"},{"name":"malignant germ cell neoplasm of pineal parenchyma","type":"exact"},{"name":"malignant germ cell neoplasm of the pineal gland","type":"exact"},{"name":"malignant germ cell neoplasm of the pineal parenchyma","type":"exact"},{"name":"malignant germ cell tumor of pineal gland","type":"exact"},{"name":"malignant germ cell tumor of pineal parenchyma","type":"exact"},{"name":"malignant germ cell tumor of the pineal gland","type":"exact"},{"name":"malignant germ cell tumor of the pineal parenchyma","type":"exact"},{"name":"malignant germ cell tumour of pineal gland","type":"exact"},{"name":"malignant germ cell tumour of pineal parenchyma","type":"exact"},{"name":"malignant germ cell tumour of the pineal gland","type":"exact"},{"name":"malignant germ cell tumour of the pineal parenchyma","type":"exact"},{"name":"malignant pineal area germ cell tumor","type":"exact"},{"name":"malignant pineal area germ cell tumour","type":"exact"},{"name":"malignant pineal gland germ cell neoplasm","type":"exact"},{"name":"malignant pineal gland germ cell tumor","type":"exact"},{"name":"malignant pineal gland germ cell tumour","type":"exact"},{"name":"malignant pineal parenchymal germ cell neoplasm","type":"exact"},{"name":"malignant pineal parenchymal germ cell tumor","type":"exact"},{"name":"malignant pineal parenchymal germ cell tumour","type":"exact"},{"name":"malignant pineal region germ cell neoplasm","type":"exact"},{"name":"malignant pineal region germ cell tumor","type":"exact"},{"name":"malignant pineal region germ cell tumour","type":"exact"},{"name":"pineal cell tumor","type":"related"},{"name":"pineal cell tumour","type":"related"},{"name":"pineal germ cell neoplasm, malignant","type":"exact"},{"name":"pineal germ cell tumor","type":"exact"},{"name":"pineal germ cell tumour","type":"exact"},{"name":"pineal region germ cell tumor","type":"exact"},{"name":"pineal region germ cell tumour","type":"exact"},{"name":"pineal region germinoma","type":"related"}],"termid":"MONDO:0002073","xrefs":{"Monarch":{"xref_id":"0002073"}}}


id: GO:0016191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of the protein coat on a synaptic vesicle following the pinching step at the end of budding from the presynaptic membrane.","definition_xrefs":["PMID:24596248","GOC:curators","PMID:10099709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin coat disassembly","termid":"GO:0072318"},{"relation_name":"part_of","term_name":"synaptic vesicle endocytosis","termid":"GO:0048488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"synaptic vesicle uncoating","synonyms":[{"name":"synaptic vesicle coat depolymerization","type":"exact"},{"name":"synaptic vesicle coat protein depolymerization","type":"exact"}],"termid":"GO:0016191"}


id: PBO:0086792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; transcription induced by the unfolded protein response; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus","termid":"PBO:0086792"}


id: PBO:0028975
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_nitrite","termid":"PBO:0028975"}


id: FYPO:0001893
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A sporulation phenotype in which azygotic asci that contain more or fewer than four spores form following conjugation, diploid growth, and subsequent azygotic sporulation. Azygotic ascus formation occurs when meiosis takes place within a diploid cell rather than in a zygote produced by sporulation. Zygotes can resume vegetative growth and form colonies of diploid cells if returned to rich media before commitment to meiosis; under nitrogen starvation, diploid cells heterozygous for mating type will undergo azygotic meiosis. Azygotic asci have a characteristic linear morphology resembling that of a single vegetatively growing cell.","definition_xrefs":["PomBase:mah","PMID:22558440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation resulting in formation of ascus with more or fewer than four spores","termid":"FYPO:0001894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0000121","FYPO:0001985"],"is_obsolete":false,"name":"abnormal sporulation resulting in formation of azygotic ascus with more or fewer than four spores","synonyms":[{"name":"abnormal sporulation resulting in formation of azygotic asci with more or fewer than four spores","type":"exact"},{"name":"sporulation defects, azygotic asci with more or fewer than four spores","type":"exact"}],"termid":"FYPO:0001893"}


id: FYPO:0005699
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of cytoplasmic microtubules from the spindle pole body (SPB) normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PMID:19001497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal interphase microtubule nucleation","termid":"FYPO:0003326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal interphase microtubule nucleation from spindle pole body","synonyms":[{"name":"normal cytoplasmic microtubule nucleation from SPB during mitotic interphase","type":"exact"},{"name":"normal cytoplasmic microtubule nucleation from spindle pole body during interphase during vegetative growth","type":"exact"},{"name":"normal cytoplasmic microtubule nucleation from spindle pole body during interphase of mitotic cell cycle","type":"exact"},{"name":"normal cytoplasmic microtubule nucleation from spindle pole body during mitotic interphase","type":"exact"},{"name":"normal interphase cytoplasmic microtubule nucleation from spindle pole body","type":"exact"}],"termid":"FYPO:0005699"}


id: SO:0002113
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A lncRNA transcript containing a retained intron.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lncRNA_primary_transcript","termid":"SO:0002035"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA_with_retained_intron","synonyms":[{"name":"lncRNA with retained intron","type":"exact"},{"name":"lncRNA_retained_intron","type":"exact"}],"termid":"SO:0002113"}


id: GO:1900940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of (Z)-nonadeca-1,14-diene metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of olefin metabolic process","termid":"GO:1900910"},{"relation_name":"is_a","term_name":"regulation of (Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900938"},{"relation_name":"positively_regulates","term_name":"(Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of (Z)-nonadeca-1,14-diene metabolic process","synonyms":[{"name":"activation of (Z)-nonadeca-1,14-diene metabolic process","type":"narrow"},{"name":"activation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"positive regulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene metabolic process","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene metabolic process","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene metabolic process","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"}],"termid":"GO:1900940"}


id: PBO:0043829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPSF1 pseudogene 2","termid":"PBO:0043829"}


id: PBO:0072203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 2","termid":"PBO:0072203"}


id: PBO:0048006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing 6","termid":"PBO:0048006"}


id: PBO:0060016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 4","termid":"PBO:0060016"}


id: GO:0043175
data:
  {"annotated_genes":["SJAG_04353","SJAG_00448","SJAG_00139","SJAG_00483","SJAG_01610","SJAG_01151","SJAG_02203","SJAG_04933","SJAG_02898","SJAG_03118","SJAG_01744"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66775],"is_not":false,"summary":null,"term":"GO:0043175"},{"annotations":[70963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001042"},{"annotations":[64691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099122"},{"annotations":[77578,72003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"},{"annotations":[71815,75907,70481,78158,78148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000993"},{"annotations":[73272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000994"}]},"cv_name":"molecular_function","definition":"Binding to an RNA polymerase core enzyme, containing a specific subunit composition defined as the core enzyme.","definition_xrefs":["GOC:jl","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase binding","termid":"GO:0070063"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00139":null,"SJAG_00448":null,"SJAG_00483":null,"SJAG_01151":null,"SJAG_01610":null,"SJAG_01744":null,"SJAG_02203":null,"SJAG_02898":null,"SJAG_03118":null,"SJAG_04353":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase core enzyme binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0043175","terms_by_termid":{"GO:0000993":null,"GO:0000994":null,"GO:0001042":null,"GO:0043175":null,"GO:0099122":null,"GO:1990269":null}}


id: MOD:01645
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-proline.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-proline removal","termid":"MOD:01645"}


id: PBO:0062690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily AB member 1 pseudogene","termid":"PBO:0062690"}


id: GO:0160139
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(2605) in 23S rRNA = pseudouridine(2605) in 23S rRNA.","definition_xrefs":["EC:5.4.99.22","RHEA:42520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA pseudouridine synthase activity","termid":"GO:0120159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824","GO:0140098"],"is_obsolete":false,"name":"23S rRNA pseudouridine(2605) synthase activity","termid":"GO:0160139"}


id: GO:0034599
data:
  {"annotated_genes":["SJAG_02515","SJAG_01292","SJAG_03924","SJAG_06622","SJAG_02044","SJAG_02249","SJAG_02858","SJAG_00996","SJAG_00027","SJAG_06621","SJAG_02495","SJAG_04403","SJAG_00668","SJAG_01855","SJAG_03828","SJAG_03896","SJAG_01734","SJAG_04788","SJAG_02573","SJAG_01199","SJAG_06611","SJAG_03330","SJAG_04399","SJAG_00419","SJAG_03414","SJAG_02945","SJAG_05181","SJAG_03303","SJAG_00365","SJAG_01162","SJAG_03653","SJAG_04823","SJAG_04125","SJAG_03903","SJAG_04953","SJAG_03166","SJAG_02485","SJAG_02433","SJAG_01084","SJAG_02135","SJAG_00984","SJAG_04311","SJAG_01216","SJAG_04632","SJAG_04036","SJAG_02592","SJAG_00141"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67730,74692,88038,88879,89572,89671,90370,91643,92749,93044,93851,95049,95475,97113,97443,100492,100841,101303,101356,104717,106094,107291,108420,108421,108422,108423,108424,108425,108426,112998,113963,114237,116221],"is_not":false,"summary":null,"term":"GO:0034599"},{"annotations":[94678,117787,108320,104534,116866,99497],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"},{"annotations":[99498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034614"},{"annotations":[109627,68142,88458,88880,92616,109583,57887,99654,64688,98774],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxidative stress","termid":"GO:0006979"},{"relation_name":"is_a","term_name":"cellular response to chemical stress","termid":"GO:0062197"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00141":null,"SJAG_00365":null,"SJAG_00419":null,"SJAG_00668":null,"SJAG_00984":null,"SJAG_00996":null,"SJAG_01084":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01292":null,"SJAG_01734":null,"SJAG_01855":null,"SJAG_02044":null,"SJAG_02135":null,"SJAG_02249":null,"SJAG_02433":null,"SJAG_02485":null,"SJAG_02495":null,"SJAG_02515":null,"SJAG_02573":null,"SJAG_02592":null,"SJAG_02858":null,"SJAG_02945":null,"SJAG_03166":null,"SJAG_03303":null,"SJAG_03330":null,"SJAG_03414":null,"SJAG_03653":null,"SJAG_03828":null,"SJAG_03896":null,"SJAG_03903":null,"SJAG_03924":null,"SJAG_04036":null,"SJAG_04125":null,"SJAG_04311":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null,"SJAG_06611":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to oxidative stress","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["Reactome:R-HSA-9707564","Reactome:R-HSA-3299685"],"synonyms":[{"name":"adaptive response to oxidative stress","type":"narrow"}],"termid":"GO:0034599","terms_by_termid":{"GO:0019430":null,"GO:0034599":null,"GO:0034614":null,"GO:0061692":null}}


id: MONDO:0019535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Drug-induced autoimmune hemolytic anemia is a type of autoimmune hemolytic anemia (AIHA) that occurs as a reaction to therapeutic drugs, and can be due to various mechanisms.","definition_xrefs":["Orphanet:90037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune hemolytic anemia","termid":"MONDO:0020108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"drug-induced autoimmune hemolytic anemia","secondary_identifiers":["UMLS:C0391817","SCTID:309742004","MEDGEN:580980","GARD:19102","ICD10CM:D59.0"],"synonyms":[{"name":"drug-induced AIHA","type":"exact"}],"termid":"MONDO:0019535","xrefs":{"Monarch":{"xref_id":"0019535"}}}


id: GO:0002052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate of neuroblast proliferation.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurogenesis","termid":"GO:0050769"},{"relation_name":"is_a","term_name":"regulation of neuroblast proliferation","termid":"GO:1902692"},{"relation_name":"is_a","term_name":"positive regulation of neural precursor cell proliferation","termid":"GO:2000179"},{"relation_name":"positively_regulates","term_name":"neuroblast proliferation","termid":"GO:0007405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuroblast proliferation","synonyms":[{"name":"activation of neuroblast proliferation","type":"narrow"},{"name":"stimulation of neuroblast proliferation","type":"narrow"},{"name":"up regulation of neuroblast proliferation","type":"exact"},{"name":"up-regulation of neuroblast proliferation","type":"exact"},{"name":"upregulation of neuroblast proliferation","type":"exact"}],"termid":"GO:0002052"}


id: PBO:0086856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative RNA-binding protein; involved in regulation of early and middle sporulation genes; forms amyloid-like aggregates under starvation that are active in translational repression","termid":"PBO:0086856"}


id: FYPO:0007571
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cortical endoplasmic reticulum (ER) organization is abnormal. Cortical ER organization results in the assembly, arrangement of constituent parts, or disassembly of the part of the endoplasmic reticulum that consists of highly dynamic tubules that are juxtaposed to the plasma membrane.","definition_xrefs":["GO:0032541","GO:0007029","PMID:19571115","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endoplasmic reticulum organization","termid":"FYPO:0000805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cortical endoplasmic reticulum organization","synonyms":[{"name":"abnormal cortical ER organization","type":"exact"},{"name":"abnormal cortical endoplasmic reticulum organisation","type":"exact"},{"name":"abnormal cortical endoplasmic reticulum organization during mitotic cell cycle","type":"related"},{"name":"abnormal cortical endoplasmic reticulum organization during vegetative growth","type":"exact"}],"termid":"FYPO:0007571"}


id: GO:0019209
data:
  {"annotated_genes":["SJAG_01411","SJAG_04509","SJAG_04502","SJAG_03371","SJAG_02026","SJAG_03453","SJAG_00296","SJAG_00236","SJAG_02785","SJAG_03936","SJAG_02232","SJAG_00333","SJAG_01401","SJAG_00439","SJAG_03695","SJAG_03340","SJAG_00142","SJAG_00424","SJAG_03618","SJAG_01000","SJAG_01605","SJAG_03090","SJAG_04140","SJAG_02057","SJAG_01213","SJAG_04200","SJAG_04666","SJAG_05017","SJAG_04020","SJAG_02605","SJAG_00318","SJAG_04614","SJAG_02332","SJAG_03699","SJAG_00457"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098744"},{"annotations":[91626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019912"},{"annotations":[116570,104508,101124,110407,108364,112462,111577,110696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061575"},{"annotations":[118406,88696,118407,98694,106633,115819,109330,111972,116774,87309,98587,90793,109329,110016,118286,110928,98586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030295"},{"annotations":[99484,104618,116775,88711,91915,90340,110037,90673,90672,117867,90625,88919,112463,108760,87382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043539"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a kinase, an enzyme which catalyzes of the transfer of a phosphate group, usually from ATP, to a substrate molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"},{"relation_name":"is_a","term_name":"kinase regulator activity","termid":"GO:0019207"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_00236":null,"SJAG_00296":null,"SJAG_00318":null,"SJAG_00333":null,"SJAG_00424":null,"SJAG_00439":null,"SJAG_00457":null,"SJAG_01000":null,"SJAG_01213":null,"SJAG_01401":null,"SJAG_01411":null,"SJAG_01605":null,"SJAG_02026":null,"SJAG_02057":null,"SJAG_02232":null,"SJAG_02332":null,"SJAG_02605":null,"SJAG_02785":null,"SJAG_03090":null,"SJAG_03340":null,"SJAG_03371":null,"SJAG_03453":null,"SJAG_03618":null,"SJAG_03695":null,"SJAG_03699":null,"SJAG_03936":null,"SJAG_04020":null,"SJAG_04140":null,"SJAG_04200":null,"SJAG_04502":null,"SJAG_04509":null,"SJAG_04614":null,"SJAG_04666":null,"SJAG_05017":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0140677","GO:0098772","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"kinase activator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019209","terms_by_termid":{"GO:0019912":null,"GO:0030295":null,"GO:0043539":null,"GO:0061575":null,"GO:0098744":null}}


id: MONDO:0011115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic paraplegia and Evans syndrome","secondary_identifiers":["MEDGEN:355764","MESH:C566652","UMLS:C1866619","OMIM:601608"],"synonyms":[{"name":"spastic paraplegia and Evans syndrome","type":"exact"}],"termid":"MONDO:0011115","xrefs":{"Monarch":{"xref_id":"0011115"}}}


id: MONDO:0002738
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of non-suppurative otitis media.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-suppurative otitis media","termid":"MONDO:0001212"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute transudative otitis media","secondary_identifiers":["ICD9:381.0","MEDGEN:543339","SCTID:359609001","UMLS:C0271432","ICD9:381.00","DOID:3697"],"synonyms":[{"name":"acute non-suppurative otitis media","type":"exact"},{"name":"acute nonsuppurative otitis media","type":"exact"},{"name":"acute otitis media with effusion","type":"exact"},{"name":"acute secretory otitis media","type":"exact"},{"name":"acute transudative otitis media","type":"exact"},{"name":"non-suppurative otitis media, acute","type":"exact"}],"termid":"MONDO:0002738","xrefs":{"Monarch":{"xref_id":"0002738"}}}


id: PBO:0046130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4H","termid":"PBO:0046130"}


id: GO:0036312
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a regulatory subunit of phosphatidylinositol 3-kinase. The regulatory subunit associates with the catalytic subunit to regulate both its activity and subcellular location.","definition_xrefs":["PMID:20505341","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol 3-kinase binding","termid":"GO:0043548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase regulatory subunit binding","synonyms":[{"name":"PI3K regulatory subunit binding","type":"exact"},{"name":"p85 binding","type":"related"}],"termid":"GO:0036312"}


id: PBO:0078374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trehalase pseudogene 1","termid":"PBO:0078374"}


id: GO:0033633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of cell-cell adhesion mediated by integrin.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-cell adhesion","termid":"GO:0022408"},{"relation_name":"is_a","term_name":"negative regulation of cell adhesion mediated by integrin","termid":"GO:0033629"},{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion mediated by integrin","termid":"GO:0033632"},{"relation_name":"negatively_regulates","term_name":"cell-cell adhesion mediated by integrin","termid":"GO:0033631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell-cell adhesion mediated by integrin","synonyms":[{"name":"negative regulation of cell-cell adhesion mediated by integrin complex","type":"exact"}],"termid":"GO:0033633"}


id: PBO:0028043
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cytoplasmic_microtubule_depolymerization_at_plus_end_at_cell_tip","termid":"PBO:0028043"}


id: MONDO:0008203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Passovoy factor defect","secondary_identifiers":["OMIM:168830","UMLS:C3149707","MEDGEN:461057"],"synonyms":[{"name":"Passovoy factor defect","type":"exact"}],"termid":"MONDO:0008203","xrefs":{"Monarch":{"xref_id":"0008203"}}}


id: GO:0090487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of secondary metabolites, the compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"secondary metabolite catabolic process","synonyms":[{"name":"secondary metabolite breakdown","type":"exact"},{"name":"secondary metabolite catabolism","type":"exact"},{"name":"secondary metabolite degradation","type":"exact"}],"termid":"GO:0090487"}


id: PBO:0081675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 596","termid":"PBO:0081675"}


id: MONDO:0010718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Absent radius-anogenital anomalies syndrome is a rare, genetic limb reduction defects syndrome characterized by bilateral radial aplasia/hypoplasia manifesting with absent/short forearms in association with anogenital abnormalities (e.g. hypospadias or imperforate anus). Additional features reported include hydrocephalus and absent preaxial digits. There have been no further descriptions in the literature since 1993.","definition_xrefs":["Orphanet:3016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"absent radius-anogenital anomalies syndrome","secondary_identifiers":["MEDGEN:333312","OMIM:312190","MESH:C535281","UMLS:C1839410","GARD:4633"],"synonyms":[{"name":"radial aplasia and anogenital anomalies","type":"related"},{"name":"radial aplasia, X-linked","type":"related"},{"name":"radius absent anogenital anomalies","type":"related"}],"termid":"MONDO:0010718","xrefs":{"Monarch":{"xref_id":"0010718"}}}


id: PBO:0080463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"visual system homeobox 2","termid":"PBO:0080463"}


id: GO:0003704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete specific RNA polymerase II transcription factor activity (obsolete GO:0003704)","synonyms":[{"name":"specific RNA polymerase II transcription factor activity","type":"exact"}],"termid":"GO:0003704"}


id: PBO:0001694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1/S-specific B-type cyclin Cig2","termid":"PBO:0001694"}


id: GO:1901112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of actinorhodin.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00173","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"},{"relation_name":"is_a","term_name":"actinorhodin metabolic process","termid":"GO:1901110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"actinorhodin biosynthetic process","synonyms":[{"name":"actinorhodin anabolism","type":"exact"},{"name":"actinorhodin biosynthesis","type":"exact"},{"name":"actinorhodin formation","type":"exact"},{"name":"actinorhodin synthesis","type":"exact"}],"termid":"GO:1901112"}


id: GO:1904654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lung alveolus development.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23962064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of lung alveolus development","termid":"GO:1904653"},{"relation_name":"negatively_regulates","term_name":"lung alveolus development","termid":"GO:0048286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lung alveolus development","synonyms":[{"name":"down regulation of alveolarization","type":"exact"},{"name":"down regulation of alveologenesis","type":"exact"},{"name":"down regulation of lung alveolus development","type":"exact"},{"name":"down-regulation of alveolarization","type":"exact"},{"name":"down-regulation of alveologenesis","type":"exact"},{"name":"down-regulation of lung alveolus development","type":"exact"},{"name":"downregulation of alveolarization","type":"exact"},{"name":"downregulation of alveologenesis","type":"exact"},{"name":"downregulation of lung alveolus development","type":"exact"},{"name":"inhibition of alveolarization","type":"narrow"},{"name":"inhibition of alveologenesis","type":"narrow"},{"name":"inhibition of lung alveolus development","type":"narrow"},{"name":"negative regulation of alveolarization","type":"exact"},{"name":"negative regulation of alveologenesis","type":"exact"}],"termid":"GO:1904654"}


id: PBO:0072214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 13","termid":"PBO:0072214"}


id: PBO:0074777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3J","termid":"PBO:0074777"}


id: PBO:0002017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain protein Dph1","termid":"PBO:0002017"}


id: PBO:0071758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P1 pseudogene 5","termid":"PBO:0071758"}


id: GO:0051867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The set of behavioral processes that occur as part of the general adaptation syndrome, the response of the body to a strong, stressful stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"},{"relation_name":"part_of","term_name":"general adaptation syndrome","termid":"GO:0051866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"general adaptation syndrome, behavioral process","synonyms":[{"name":"behavioral process during general adaptation syndrome","type":"exact"},{"name":"behavioral response during general adaptation syndrome","type":"exact"},{"name":"behavioural process during general adaptation syndrome","type":"exact"},{"name":"behavioural response during general adaptation syndrome","type":"exact"},{"name":"general adaptation syndrome, behavioral response","type":"exact"},{"name":"general adaptation syndrome, behavioural process","type":"exact"},{"name":"general adaptation syndrome, behavioural response","type":"exact"}],"termid":"GO:0051867"}


id: MONDO:0041008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete contact dermatitis caused by poison oak (obsolete MONDO:0041008)","secondary_identifiers":["SCTID:200824008"],"synonyms":[{"name":"contact dermatitis caused by poison oak","type":"exact"},{"name":"contact dermatitis due to poison oak","type":"exact"}],"termid":"MONDO:0041008","xrefs":{"Monarch":{"xref_id":"0041008"}}}


id: PATO:0001643
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality inhering in a bearer by virtue of the bearer's having a short, stocky build.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stubby","termid":"PATO:0001643"}


id: GO:1905364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endosomal vesicle fusion.","definition_xrefs":["PMID:26911690","GOC:PARL","GO_REF:0000058","GOC:bc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle fusion","termid":"GO:0031338"},{"relation_name":"regulates","term_name":"endosomal vesicle fusion","termid":"GO:0034058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"regulation of endosomal vesicle fusion","synonyms":[{"name":"regulation of endosome vesicle fusion","type":"exact"}],"termid":"GO:1905364"}


id: FYPO:0000549
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119110,119111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}],"single_locus_phenotype":[{"annotations":[119103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein modification is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"},{"relation_name":"is_a","term_name":"normal protein modification","termid":"FYPO:0002495"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03689","SJAG_03118","SJAG_02621"],"name":"normal protein modification during vegetative growth","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"normal protein modification during mitotic cell cycle","type":"related"},{"name":"normal protein/peptide modification during vegetative growth","type":"exact"}],"termid":"FYPO:0000549","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0006989":null}}


id: GO:1905270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a Meynert cell.","definition_xrefs":["GO_REF:0000086","GOC:TermGenie","PMID:4142639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyramidal neuron differentiation","termid":"GO:0021859"},{"relation_name":"is_a","term_name":"cerebral cortex neuron differentiation","termid":"GO:0021895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Meynert cell differentiation","termid":"GO:1905270"}


id: PBO:0077816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p53 inducible protein 13","termid":"PBO:0077816"}


id: GO:0048816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the ocellus are generated and organized. The ocellus is a simple visual organ of insects.","direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"is_a","term_name":"sensory organ morphogenesis","termid":"GO:0090596"},{"relation_name":"part_of","term_name":"eye-antennal disc morphogenesis","termid":"GO:0007455"},{"relation_name":"part_of","term_name":"ocellus development","termid":"GO:0008056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ocellus morphogenesis","termid":"GO:0048816"}


id: MONDO:1010783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ectodermal dysplasia/skin fragility syndrome that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia/skin fragility syndrome, non-human animal","termid":"MONDO:1010141"},{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex, dog","termid":"MONDO:1011500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectodermal dysplasia/skin fragility syndrome, dog","secondary_identifiers":["OMIA:001864-9615"],"termid":"MONDO:1010783","xrefs":{"Monarch":{"xref_id":"1010783"}}}


id: GO:0060426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a lung vasculature from an initial condition to its mature state. This process begins with the formation of the lung vasculature and ends with the mature structure. The lung vasculature is composed of the tubule structures that carry blood or lymph in the lungs.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasculature development","termid":"GO:0001944"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung vasculature development","synonyms":[{"name":"pulmonary vasculature development","type":"exact"}],"termid":"GO:0060426"}


id: MONDO:0033170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"statin toxicity","secondary_identifiers":["Orphanet:413696"],"termid":"MONDO:0033170","xrefs":{"Monarch":{"xref_id":"0033170"}}}


id: PBO:0042421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 27 pseudogene 5","termid":"PBO:0042421"}


id: MONDO:0005448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Liver injury resulting from hepatitis C infection.","definition_xrefs":["EFO:0005129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cirrhosis of liver","termid":"MONDO:0005155"},{"relation_name":"is_a","term_name":"post-viral disorder","termid":"MONDO:0021674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"hepatitis C induced liver cirrhosis","secondary_identifiers":["UMLS:C4763867","MEDGEN:1674707"],"termid":"MONDO:0005448","xrefs":{"Monarch":{"xref_id":"0005448"}}}


id: PBO:0071512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 15","termid":"PBO:0071512"}


id: PBO:0088049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin hydrolase; deubiquitinates intralumenal vesicle (ILVs) cargo proteins; required for recycling ubiquitin from proteasome-bound ubiquitinated intermediates, acts at the late endosome/prevacuolar compartment to recover ubiquitin from ubiquitinated membrane proteins destined for the vacuole; DOA4 has a paralog, UBP5, that arose from the whole genome duplication","termid":"PBO:0088049"}


id: GO:0098772
data:
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id: GO:0001978
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that modulates blood pressure by sensing the amount of stretch occurring in large arteries and responding to the input via central nervous system control.","definition_xrefs":["GOC:tb","GOC:dph","ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by baroreceptor feedback","termid":"GO:0003025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by carotid sinus baroreceptor feedback","synonyms":[{"name":"baroreceptor feedback control of blood pressure","type":"related"},{"name":"baroreceptor pressure buffer system","type":"related"},{"name":"carotid sinus baroreceptor feedback regulation of systemic arterial blood pressure","type":"exact"}],"termid":"GO:0001978"}


id: GO:0010457
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the two centrioles within a centrosome remain tightly paired.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"centrosome cycle","termid":"GO:0007098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0007010","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"centriole-centriole cohesion","termid":"GO:0010457"}


id: PBO:0082163
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adenylate kinase, required for purine metabolism; localized to the cytoplasm and the mitochondria; lacks cleavable signal sequence; protein abundance increases in response to DNA replication stress; mutations affecting Adk1p catalytic activity deregulate expression of phosphate utilization genes PHO5 and PHO84; human homolog AK1 can complement yeast adk1 mutant","termid":"PBO:0082163"}


id: MOD:01660
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction with 1-amino-4-{[3-(ethenylsulfonyl)phenyl]amino}-9,10-dioxo-9,10-dihydroanthracene-2-sulfonate, Uniblue A, to form Uniblue A cysteine adduct.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"Uniblue A derivatized residue","termid":"MOD:01659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"Uniblue A derivatized cysteine","synonyms":[{"name":"1-amino-4-{[3-(ethenylsulfonyl)phenyl]amino}-9,10-dioxo-9,10-dihydroanthracene-2-sulfonate","type":"exact"},{"name":"1-amino-9,10-dioxo-4-{[3-(vinylsulfonyl)phenyl]amino}-9,10-dihydroanthracene-2-sulfonate","type":"exact"},{"name":"SUniblueACys","type":"exact"},{"name":"Uniblue A","type":"exact"}],"termid":"MOD:01660"}


id: GO:0030540
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the female genitalia over time, from formation to the mature structure.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genitalia development","termid":"GO:0048806"},{"relation_name":"part_of","term_name":"female sex differentiation","termid":"GO:0046660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female genitalia development","synonyms":[{"name":"female genital development","type":"exact"}],"termid":"GO:0030540"}


id: GO:0050196
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [phosphorylase a] + 4 H2O = 2 [phosphorylase b] + 4 phosphate.","definition_xrefs":["MetaCyc:PHOSPHORYLASE-PHOSPHATASE-RXN","EC:3.1.3.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0140096","GO:0004721","GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"[phosphorylase] phosphatase activity","synonyms":[{"name":"PR-enzyme","type":"related"},{"name":"glycogen phosphorylase phosphatase activity","type":"related"},{"name":"phosphorylase a phosphatase activity","type":"related"},{"name":"phosphorylase a phosphohydrolase activity","type":"related"},{"name":"phosphorylase phosphatase activity","type":"exact"},{"name":"protein phosphatase C","type":"related"},{"name":"type 1 protein phosphatase activity","type":"related"}],"termid":"GO:0050196"}


id: PBO:0081554
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF473 cis regulating lncRNA","termid":"PBO:0081554"}


id: PBO:0081684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 606","termid":"PBO:0081684"}


id: PBO:0058518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5706","termid":"PBO:0058518"}


id: PBO:0082289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arginase, catabolizes arginine to ornithine and urea; expression responds to both induction by arginine and nitrogen catabolite repression; disruption decreases production of carcinogen ethyl carbamate during wine fermentation and also enhances freeze tolerance","termid":"PBO:0082289"}


id: PBO:0039073
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase 1","termid":"PBO:0039073"}


id: GO:0043940
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  {"annotated_genes":["SJAG_02169","SJAG_04140","SJAG_04853","SJAG_00993"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[101792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[90209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"},{"annotations":[91673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034307"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the formation of cellular spores derived from the products of meiosis.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sexual sporulation","termid":"GO:0034306"},{"relation_name":"is_a","term_name":"regulation of sporulation resulting in formation of a cellular spore","termid":"GO:0042173"},{"relation_name":"regulates","term_name":"sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043935"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_02169":null,"SJAG_04140":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of sexual sporulation resulting in formation of a cellular spore","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043940","terms_by_termid":{"GO:0034307":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: PBO:0029350
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_tRNA_level_during_vegetative_growth","termid":"PBO:0029350"}


id: PBO:0087138
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein that associates with polysomes; may be involved in regulating mRNA translation; involved in the copper-dependent mineralization of copper sulfide complexes on cell surface in cells cultured in copper salts; SLF1 has a paralog, SRO9, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0087138"}


id: GO:0034977
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the precursor form of NF-kappaB (p105), the NF-kappaB inhibitor ABIN-2, and the kinase TPL-2 (MAP3K8); the complex stabilizes TPL-2 and is involved in signaling in lipopolysaccharide (LPS)-stimulated macrophages.","definition_xrefs":["PMID:15169888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"ABIN2-NFKB1-MAP3K8 complex","synonyms":[{"name":"ABIN2-NFKB1-TPL-1 complex","type":"exact"}],"termid":"GO:0034977"}


id: PBO:0057981
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3908","termid":"PBO:0057981"}


id: GO:0043930
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Increase in size of primary follicles including oocyte growth and granulosa and/or theca cell proliferation until more than one layer of granulosa cells is present (preantral follicle) as part of the primary follicle stage of oogenesis.","definition_xrefs":["GOC:mtg_mpo"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ovarian follicle growth","termid":"GO:0001545"},{"relation_name":"part_of","term_name":"primary follicle stage","termid":"GO:0048160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary ovarian follicle growth involved in primary follicle stage","synonyms":[{"name":"primary ovarian follicle growth during primary follicle stage","type":"related"}],"termid":"GO:0043930"}


id: GO:0061723
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  {"annotated_genes":["SJAG_00115","SJAG_04963","SJAG_06309","SJAG_03851","SJAG_01561","SJAG_01783"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89562,97096,98104,99779,108137,109264],"is_not":false,"summary":null,"term":"GO:0061723"}]},"cv_name":"biological_process","definition":"The selective degradation of glycogen by macroautophagy.","definition_xrefs":["GOC:autophagy","PMID:21893048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen catabolic process","termid":"GO:0005980"},{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_01561":null,"SJAG_01783":null,"SJAG_03851":null,"SJAG_04963":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0006091","GO:0006914","GO:0005975"],"is_obsolete":false,"name":"glycophagy","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061723","terms_by_termid":{"GO:0061723":null}}


id: PBO:0075762
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/arginine repetitive matrix 2","termid":"PBO:0075762"}


id: MONDO:0003963
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This is usually an oligoclonal CD8+ lymphocytic infiltration of various organs.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diffuse infiltrative lymphocytosis syndrome","secondary_identifiers":["DOID:6677","NCIT:C35699","SCTID:449784008","UMLS:C1333292","MEDGEN:232428"],"synonyms":[{"name":"diffuse infiltra. lymph. sydrome","type":"exact"},{"name":"diffuse infiltra. lymph. syndrome","type":"exact"}],"termid":"MONDO:0003963","xrefs":{"Monarch":{"xref_id":"0003963"}}}


id: PR:O74401
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ERO1-like protein beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERO1-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.16c","secondary_identifiers":["UniProtKB:O74401"],"synonyms":[{"name":"SPBC4F6.16c","type":"related"},{"name":"Spom972h-ERO1LB","type":"exact"},{"name":"endoplasmic reticulum oxidoreductin-1-like protein A (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74401"}


id: GO:0035630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The deposition of hydroxyapatite, involved in the progression of the skeleton from its formation to its mature state.","definition_xrefs":["GOC:bf","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone mineralization","termid":"GO:0030282"},{"relation_name":"part_of","term_name":"ossification involved in bone maturation","termid":"GO:0043931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone mineralization involved in bone maturation","termid":"GO:0035630"}


id: MONDO:0012697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"otosclerosis","termid":"MONDO:0005349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otosclerosis 7","secondary_identifiers":["MESH:C566913","OMIM:611572","MEDGEN:409738","UMLS:C1969044","DOID:0060925"],"synonyms":[{"name":"OTSC7","type":"exact"},{"name":"otosclerosis 7","type":"exact"}],"termid":"MONDO:0012697","xrefs":{"Monarch":{"xref_id":"0012697"}}}


id: PBO:0070694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L8 pseudogene 3","termid":"PBO:0070694"}


id: MONDO:0006926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the genus haemophilus.","definition_xrefs":["MESH:D006192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haemophilus infectious disease","secondary_identifiers":["SCTID:41659003","NCIT:C34654","EFO:1001127"],"synonyms":[{"name":"Haemophilus caused disease or disorder","type":"exact"},{"name":"Haemophilus disease or disorder","type":"exact"},{"name":"Haemophilus infection","type":"related"},{"name":"Haemophilus infectious disease","type":"exact"},{"name":"Hemophilus infection","type":"related"},{"name":"Hemophilus infections","type":"related"},{"name":"haemophilus infectious disease","type":"exact"},{"name":"infection, Haemophilus","type":"related"},{"name":"infection, Hemophilus","type":"related"},{"name":"infections, Haemophilus","type":"related"},{"name":"infections, Hemophilus","type":"related"}],"termid":"MONDO:0006926","xrefs":{"Monarch":{"xref_id":"0006926"}}}


id: PATO:0001301
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An optical quality that is the mixture, purity or pattern of wavelengths of light perceived by the observer.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optical quality","termid":"PATO:0001300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatic property","termid":"PATO:0001301"}


id: PBO:0070144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 58 pseudogene","termid":"PBO:0070144"}


id: PBO:0005484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-coA desaturase (predicted)","termid":"PBO:0005484"}


id: FYPO:0001768
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional addition of methyl groups to the C38 residue in a tRNA-Asp molecule is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished RNA modification","termid":"FYPO:0000371"},{"relation_name":"is_a","term_name":"abnormal tRNA methylation","termid":"FYPO:0001766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000294","FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished tRNA-Asp C38 methylation","synonyms":[{"name":"abolished tRNA-Asp C38 methylation during mitotic cell cycle","type":"related"},{"name":"abolished tRNA-Asp C38 methylation during vegetative growth","type":"exact"},{"name":"abolished tRNA-Asp methylation on C38","type":"exact"},{"name":"tRNA-Asp C38 methylation abolished","type":"exact"}],"termid":"FYPO:0001768"}


id: GO:0005168
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neurotrophin TRKA receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotrophin TRK receptor binding","termid":"GO:0005167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"neurotrophin TRKA receptor binding","synonyms":[{"name":"neurotrophin TRKA receptor ligand","type":"narrow"}],"termid":"GO:0005168"}


id: MOD:00927
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces two hydrogen atoms of a residue containing common isotopes with two (13)C,3x(2)H labeled methyl groups to form a 2x(13)C,6x(2)H labeled dimethylated residue.","definition_xrefs":["PubMed:16335955","PubMed:3802193","Unimod:510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium labeled residue","termid":"MOD:00839"},{"relation_name":"is_a","term_name":"(13)C labeled residue","termid":"MOD:00842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2x(13)C,4x(2)H labeled dimethylated residue","synonyms":[{"name":"DiMethyl-C13HD2","type":"related"},{"name":"Dimethyl:2H(4)13C(2)","type":"related"}],"termid":"MOD:00927"}


id: MOD:01442
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-valine residue and an L-tyrosine residue by an ether bond to form 3-(O4'-L-tyrosyl)-L-valine.","definition_xrefs":["PubMed:19321420","RESID:AA0490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"},{"relation_name":"is_a","term_name":"crosslinked L-valine residue","termid":"MOD:02059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-(O4'-L-tyrosyl)-L-valine","synonyms":[{"name":"(2S)-2-amino-3-(4-[(2S)-2-amino-2-carboxyethyl]phenoxy)-3-methylbutanoic acid","type":"exact"},{"name":"3-(O4'-L-tyrosyl)-L-valine","type":"exact"},{"name":"CROSSLNK 3-(O4'-tyrosyl)-valine (Val-Tyr)","type":"exact"}],"termid":"MOD:01442"}


id: FYPO:0006271
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to floxuridine (5-fluoro-2'-deoxyuridine). Cells stop growing (and may die) at a concentration of floxuridine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002683","FYPO:0000139","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to floxuridine","synonyms":[{"name":"hypersensitive to floxuridine","type":"exact"},{"name":"sensitive to 5-fluoro-2'-deoxyuridine","type":"exact"},{"name":"sensitive to 5-fluoro-2-deoxyuridine","type":"exact"},{"name":"sensitive to FUDR","type":"exact"},{"name":"sensitive to FdU","type":"exact"},{"name":"sensitive to floxuridin","type":"exact"},{"name":"sensitive to floxuridine during mitotic cell cycle","type":"related"},{"name":"sensitive to floxuridine during vegetative growth","type":"exact"}],"termid":"FYPO:0006271"}


id: PBO:0067214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 280, pseudogene","termid":"PBO:0067214"}


id: PBO:0038858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTSL4 antisense RNA 1","termid":"PBO:0038858"}


id: PBO:0028952
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-curved_cell_during_recovery_from_stationary_phase","termid":"PBO:0028952"}


id: PBO:0017039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial endonuclease, possibly DNA damage related (predicted)","termid":"PBO:0017039"}


id: PR:Q09785
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glycine dehydrogenase [decarboxylating], mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11773:SF0","PRO:DNx","OMA:SCHPO00067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine dehydrogenase (decarboxylating), mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.06c","secondary_identifiers":["UniProtKB:Q09785"],"synonyms":[{"name":"Spom972h-GLDC","type":"exact"},{"name":"glycine cleavage system P protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glycine decarboxylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glycine dehydrogenase (aminomethyl-transferring) (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09785"}


id: GO:0004498
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: calcidiol + H+ + NADPH + O2 = calcitriol + H2O + NADP+.","definition_xrefs":["EC:1.14.15.18","RHEA:20573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"calcidiol 1-monooxygenase activity","secondary_identifiers":["Reactome:R-HSA-209868","MetaCyc:CALCIDIOL-1-MONOOXYGENASE-RXN","Reactome:R-HSA-5602186","KEGG_REACTION:R03610"],"synonyms":[{"name":"1-hydroxylase-25-hydroxyvitamin D3 activity","type":"related"},{"name":"25-OHD-1 alpha-hydroxylase activity","type":"related"},{"name":"25-hydroxy D3-1alpha-hydroxylase activity","type":"related"},{"name":"25-hydroxy vitamin D3 1-alpha-hydroxylase activity","type":"exact"},{"name":"25-hydroxycholecalciferol 1-hydroxylase activity","type":"exact"},{"name":"25-hydroxycholecalciferol 1-monooxygenase activity","type":"related"},{"name":"25-hydroxycholecalciferol 1alpha-hydroxylase activity","type":"related"},{"name":"25-hydroxycholecalciferol-1-hydroxylase activity","type":"related"},{"name":"25-hydroxyvitamin D-1 alpha hydroxylase activity","type":"related"},{"name":"25-hydroxyvitamin D3 1alpha-hydroxylase activity","type":"related"},{"name":"calcidiol,NADPH:oxygen oxidoreductase (1-hydroxylating)","type":"exact"},{"name":"cytochrome P450 CYP27B","type":"narrow"}],"termid":"GO:0004498"}


id: GO:0051204
data:
  {"annotated_genes":["SJAG_05300","SJAG_01917","SJAG_01405","SJAG_03633","SJAG_05302"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114192],"is_not":false,"summary":null,"term":"GO:0051204"},{"annotations":[98510,112842,100413,114191,88275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"}]},"cv_name":"biological_process","definition":"The process that results in the incorporation of a protein into a mitochondrial membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein insertion into membrane","termid":"GO:0051205"},{"relation_name":"is_a","term_name":"establishment of protein localization to mitochondrial membrane","termid":"GO:0090151"},{"relation_name":"part_of","term_name":"protein localization to mitochondrion","termid":"GO:0070585"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01405":null,"SJAG_01917":null,"SJAG_03633":null,"SJAG_05300":null,"SJAG_05302":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0061024","GO:0051179","GO:0007005","GO:0008150"],"is_obsolete":false,"name":"protein insertion into mitochondrial membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"integral mitochondrial membrane protein localization","type":"exact"},{"name":"integral mitochondrial membrane protein positioning","type":"exact"},{"name":"localization of protein in mitochondrial membrane","type":"exact"},{"name":"positioning of protein in mitochondrial membrane","type":"exact"},{"name":"protein insertion into mitochondrion membrane","type":"exact"},{"name":"protein-mitochondrial membrane insertion","type":"exact"},{"name":"protein-mitochondrion membrane insertion","type":"exact"}],"termid":"GO:0051204","terms_by_termid":{"GO:0032979":null,"GO:0051204":null}}


id: MONDO:0005185
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An older, deprecated term that encompassed three major types of autoimmune or autoinflammatory arthritis in children: systemic-onset, pauciarticular, or polyarticular arthritis. The juvenile rheumatoid arthritis classification system has been replaced by the International League of Associations for Rheumatology (ILAR) juvenile idiopathic arthritis classification system.","definition_xrefs":["NCIT:C27179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatoid arthritis","termid":"MONDO:0008383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"chronic childhood arthritis","secondary_identifiers":["SCTID:410793008","Wikipedia:Juvenile_idiopathic_arthritis","MEDGEN:732010","UMLS:C1444838"],"synonyms":[{"name":"JRA","type":"exact"},{"name":"Juvenile rheumatoid arthritis","type":"exact"},{"name":"Juvenile rheumatoid arthritis (AQ)","type":"exact"}],"termid":"MONDO:0005185","xrefs":{"Monarch":{"xref_id":"0005185"}}}


id: PBO:0073153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC31 homolog A, COPII coat complex component","termid":"PBO:0073153"}


id: GO:0031713
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a B2 bradykinin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bradykinin receptor binding","termid":"GO:0031711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"B2 bradykinin receptor binding","synonyms":[{"name":"B2 bradykinin receptor ligand","type":"narrow"}],"termid":"GO:0031713"}


id: GO:0001710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell differentiation process that results in commitment of a cell to become part of the mesoderm.","definition_xrefs":["ISBN:0878932437","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment involved in formation of primary germ layer","termid":"GO:0060795"},{"relation_name":"part_of","term_name":"mesodermal cell differentiation","termid":"GO:0048333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesodermal cell fate commitment","synonyms":[{"name":"mesoderm cell fate commitment","type":"exact"}],"termid":"GO:0001710"}


id: SO:0000190
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intron that is the most 5-prime in a given transcript.","direct_ancestors":[{"relation_name":"is_a","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_intron","synonyms":[{"name":"5' intron","type":"exact"},{"name":"5' intron sequence","type":"exact"},{"name":"five prime intron","type":"exact"}],"termid":"SO:0000190"}


id: PBO:0077032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit 1","termid":"PBO:0077032"}


id: PBO:0070760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 16","termid":"PBO:0070760"}


id: PBO:0075020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-31","termid":"PBO:0075020"}


id: GO:0031619
data:
  {"annotated_genes":["SJAG_05019","SJAG_01224","SJAG_03926","SJAG_07002","SJAG_05295","SJAG_01805","SJAG_03327","SJAG_03698","SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87286,89764,93276,98121,100831,107309,113276,115033,116556],"is_not":false,"summary":null,"term":"GO:0031619"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the sister centromeres and kinetochores of one chromosome are fused and orientated so the chromosomes attach to microtubules that emanate from the same spindle pole. This process ensures that homologous l chromosomes are segregated at anaphase of meiosis I.","definition_xrefs":["PMID:15062096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome localization","termid":"GO:0050000"},{"relation_name":"part_of","term_name":"meiotic metaphase I homologous chromosome alignment","termid":"GO:0043060"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01224":null,"SJAG_01805":null,"SJAG_03327":null,"SJAG_03698":null,"SJAG_03926":null,"SJAG_04259":null,"SJAG_05019":null,"SJAG_05295":null,"SJAG_07002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"homologous chromosome orientation in meiotic metaphase I","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"homologous chromosome orientation during meiosis","type":"related"},{"name":"homologous chromosome orientation during meiosis I","type":"related"}],"termid":"GO:0031619","terms_by_termid":{"GO:0031619":null}}


id: CHEBI:27266
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"valine","termid":"CHEBI:27266"}


id: FYPO:0005459
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break repair via nonhomologous end joining (NHEJ) does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished double-strand break repair","termid":"FYPO:0005436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000293","FYPO:0000002","FYPO:0001320","FYPO:0000298","FYPO:0005447"],"is_obsolete":false,"name":"abolished double-strand break repair via nonhomologous end joining","synonyms":[{"name":"abolished double-strand break repair via NHEJ","type":"exact"},{"name":"abolished double-strand break repair via nonhomologous end joining during mitotic cell cycle","type":"related"},{"name":"abolished double-strand break repair via nonhomologous end joining during vegetative growth","type":"exact"},{"name":"double-strand break repair via nonhomologous end joining abolished","type":"exact"}],"termid":"FYPO:0005459"}


id: GO:0140849
data:
  {"annotated_genes":["SJAG_02571"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87460],"is_not":false,"summary":null,"term":"GO:0140849"}]},"cv_name":"molecular_function","definition":"A histone chaperone that mediates the exchange of histone H2A-H2B dimer and histone H2AZ-H2B dimers in a nucleosome, driven by ATP hydrolysis. Some chaperones insert H2AZ-H2B dimers and remove H2A-H2B, while others do the opposite.","definition_xrefs":["PMID:21241891","PMID:30309918","PMID:23580526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent histone chaperone activity","termid":"GO:0140674"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02571":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0140597"},{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003824","GO:0140104","GO:0140096","GO:0003674","GO:0140097","GO:0140597"],"is_obsolete":false,"name":"ATP-dependent H2AZ histone chaperone activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP-dependent H2A.Z histone chaperone activity","type":"exact"},{"name":"H2AZ histone exchange activity","type":"related"}],"termid":"GO:0140849","terms_by_termid":{"GO:0140849":null}}


id: PATO:0000872
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000872 anxious (obsolete PATO:0000872)","termid":"PATO:0000872"}


id: GO:1903960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of anion transmembrane transport.","definition_xrefs":["GOC:vw","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transmembrane transport","termid":"GO:0034766"},{"relation_name":"is_a","term_name":"negative regulation of monoatomic anion transport","termid":"GO:1903792"},{"relation_name":"is_a","term_name":"regulation of monoatomic anion transmembrane transport","termid":"GO:1903959"},{"relation_name":"negatively_regulates","term_name":"monoatomic anion transmembrane transport","termid":"GO:0098656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of anion transmembrane transport","synonyms":[{"name":"down regulation of anion transmembrane transport","type":"exact"},{"name":"down-regulation of anion transmembrane transport","type":"exact"},{"name":"downregulation of anion transmembrane transport","type":"exact"},{"name":"inhibition of anion transmembrane transport","type":"narrow"}],"termid":"GO:1903960"}


id: PATO:0002481
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a slanting direction or position : neither perpendicular nor parallel.","definition_xrefs":["merriam-wester:http://www.merriam-webster.com/dictionary/oblique"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oblique orientation","termid":"PATO:0002481"}


id: FYPO:0003098
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin assembly is abnormal in centromere outer repeat regions. Heterochromatin assembly is the assembly of chromatin into a compact and highly condensed form that is often, but not always, transcriptionally silent.","definition_xrefs":["PomBase:mah","GO:0031507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin assembly","termid":"FYPO:0003044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"abnormal heterochromatin assembly at centromere outer repeat during vegetative growth","synonyms":[{"name":"abnormal heterochromatin assembly at centromere outer repeat at centromere otr during vegetative growth","type":"exact"},{"name":"abnormal heterochromatin assembly at centromere outer repeat at centromeric outer repeat during vegetative growth","type":"exact"},{"name":"abnormal heterochromatin assembly at centromere outer repeat at pericentric region during vegetative growth","type":"related"},{"name":"abnormal heterochromatin assembly at centromere outer repeat at pericentromeric region during vegetative growth","type":"related"},{"name":"abnormal heterochromatin assembly at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abnormal heterochromatin formation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0003098"}


id: MONDO:0012862
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"attention deficit-hyperactivity disorder","termid":"MONDO:0007743"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attention deficit-hyperactivity disorder, susceptibility to, 5","secondary_identifiers":["MEDGEN:394114","OMIM:612311","UMLS:C2676741"],"synonyms":[{"name":"ADHD5","type":"exact"},{"name":"attention Deficit-hyperactivity disorder, susceptibility to, type 5","type":"exact"},{"name":"attention deficit-hyperactivity disorder, susceptibility to, 5","type":"exact"},{"name":"motor timing quantitative trait locus","type":"related"}],"termid":"MONDO:0012862","xrefs":{"Monarch":{"xref_id":"0012862"}}}


id: FYPO:0005952
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is normal (i.e. indistinguishable from wild type) in chromatin regions where RNA polymerase II actively transcribes genes. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:28218250","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nucleosome positioning in euchromatin","termid":"FYPO:0000857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal nucleosome occupancy at highly transcribed RNA polymerase II genes","synonyms":[{"name":"normal nucleosome occupancy at highly transcribed RNA polymerase II genes during mitotic cell cycle","type":"related"},{"name":"normal nucleosome occupancy at highly transcribed RNA polymerase II genes during vegetative growth","type":"exact"}],"termid":"FYPO:0005952"}


id: PBO:0076430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 11 like 6","termid":"PBO:0076430"}


id: GO:1900899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of heptadecane metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"heptadecane metabolic process","termid":"GO:1900635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heptadecane metabolic process","synonyms":[{"name":"regulation of heptadecane metabolism","type":"exact"}],"termid":"GO:1900899"}


id: PBO:0059637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 3","termid":"PBO:0059637"}


id: PBO:0057373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ao","termid":"PBO:0057373"}


id: FYPO:0007335
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing does not occur at centromere inner repeat regions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at centromere","termid":"FYPO:0000146"},{"relation_name":"is_a","term_name":"abolished chromatin silencing","termid":"FYPO:0007333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished chromatin silencing at centromere inner repeat","synonyms":[{"name":"abolished chromatin silencing at centromere imr","type":"exact"},{"name":"abolished chromatin silencing at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"abolished chromatin silencing at centromere inner repeat during vegetative growth","type":"exact"},{"name":"abolished chromatin silencing at centromeric inner repeat region","type":"exact"},{"name":"abolished heterochromatin silencing at centromere inner repeat","type":"exact"},{"name":"chromatin silencing at centromere inner repeatabolished","type":"exact"}],"termid":"FYPO:0007335"}


id: GO:0071553
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a pyrimidine nucleotide and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:sl","PMID:10736418","PMID:12369950","PMID:15796906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"nucleotide receptor activity","termid":"GO:0016502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled pyrimidinergic nucleotide receptor activity","synonyms":[{"name":"G protein coupled pyrimidinergic nucleotide receptor activity","type":"exact"},{"name":"G-protein coupled pyrimidinergic nucleotide receptor activity","type":"exact"},{"name":"pyrimidinergic nucleotide receptor activity, G protein coupled","type":"exact"},{"name":"pyrimidinergic nucleotide receptor activity, G-protein coupled","type":"exact"}],"termid":"GO:0071553"}


id: FYPO:0002542
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of threonine residues N-terminal to proline residues (i.e. in Thr-Pro sequences) occurs to a lower extent than normal during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein threonine phosphorylation at Thr-Pro site during cellular response to hydrogen peroxide (obsolete FYPO:0002542)","synonyms":[{"name":"decreased protein threonine phosphorylation at TP site during cellular response to hydrogen peroxide","type":"exact"},{"name":"decreased protein threonine phosphorylation at Thr-Pro site during cellular response to H2O2","type":"exact"},{"name":"decreased protein threonine phosphorylation at Thr-Pro site during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"decreased protein threonine phosphorylation at Thr-Pro site during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"decreased protein threonine phosphorylation at threonine-proline site during cellular response to hydrogen peroxide","type":"exact"},{"name":"reduced protein threonine phosphorylation at Thr-Pro site during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0002542"}


id: MONDO:0018722
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary lymphedema with associated anomalies (obsolete MONDO:0018722)","secondary_identifiers":["Orphanet:458841"],"termid":"MONDO:0018722","xrefs":{"Monarch":{"xref_id":"0018722"}}}


id: MONDO:0001417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare lymphoma that arises from the trachea. Signs and symptoms include dyspnea, cough, wheezing, and stridor.","definition_xrefs":["NCIT:C6248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tracheal cancer","termid":"MONDO:0001407"},{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"tracheal lymphoma","secondary_identifiers":["DOID:12001","MEDGEN:277825","UMLS:C1336773"],"synonyms":[{"name":"lymphoma of the trachea","type":"exact"},{"name":"lymphoma of trachea","type":"exact"},{"name":"primary tracheal lymphoma","type":"exact"},{"name":"trachea lymphoma","type":"exact"},{"name":"tracheal lymphoma","type":"exact"}],"termid":"MONDO:0001417","xrefs":{"Monarch":{"xref_id":"0001417"}}}


id: PBO:0029478
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cerulenin","termid":"PBO:0029478"}


id: FYPO:0004282
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of xanthine DNA N-glycosylase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal xanthine DNA N-glycosylase activity","termid":"FYPO:0004281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"decreased xanthine DNA N-glycosylase activity","synonyms":[{"name":"reduced xanthine DNA N-glycosylase activity","type":"exact"}],"termid":"FYPO:0004282"}


id: MONDO:0020512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute lymphoblastic leukemia","termid":"MONDO:0004967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"precursor T-cell acute lymphoblastic leukemia","secondary_identifiers":["GARD:19694","icd11.foundation:803161771","Orphanet:99861","EFO:1001830"],"synonyms":[{"name":"T-ALL","type":"broad"},{"name":"precursor T-cell acute lymphoblastic leukemia/lymphoma","type":"exact"},{"name":"precursor T-cell acute lymphocytic leukaemia","type":"exact"},{"name":"precursor T-cell acute lymphocytic leukemia","type":"exact"},{"name":"precursor T-cell acute lymphocytic leukemia/lymphoma","type":"exact"}],"termid":"MONDO:0020512","xrefs":{"Monarch":{"xref_id":"0020512"}}}


id: PBO:0027710
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-small_binucleate_cell_during_stationary_phase","termid":"PBO:0027710"}


id: PBO:0110385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3122","termid":"PBO:0110385"}


id: MONDO:0013811
data:
  {"annotated_genes":["SJAG_01413"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85948],"is_not":false,"summary":null,"term":"MONDO:0013811"}]},"cv_name":"mondo","definition":"Combined oxidative phosphorylation defect type 9 is a rare mitochondrial disease due to a defect in mitochondrial protein synthesis characterized by initially normal growth and development followed by the infantile-onset of failure to thrive, psychomotor delay, poor feeding, dyspnea, severe hypertrophic cardiomyopathy and hepatomegaly. Laboratory studies report increased plasma lactate and alanine, abnormal liver enzymes and decreased activity of mitochondrial respiratory chain complexes I, III, IV, and V.","definition_xrefs":["Orphanet:319509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01413":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation defect type 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4706315","SCTID:763209008","DOID:0111472","MEDGEN:1634481","OMIM:614582","GARD:17453"],"synonyms":[{"name":"COXPD9","type":"exact"},{"name":"MRPL3 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 9","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in MRPL3","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 9","type":"exact"}],"termid":"MONDO:0013811","terms_by_termid":{"MONDO:0013811":null},"xrefs":{"Monarch":{"xref_id":"0013811"}}}


id: MONDO:0035151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, multiple congenital anomalies/dysmorphic features-intellectual disability syndrome characterized by developmental and speech delay, intellectual disability, feeding difficulties, failure to thrive, growth retardation, and associated malformations such as abnormality of fingers and toes (i.e. clinodactyly of the 5th finger, 2-3 toe syndactyly), microcephaly, heart defects, and upper airways anomalies. Observed facial dysmorphism includes hypertelorism, small, narrow or downslanting palpebral fissures, ptosis, epicanthus, ear malformations, broad nasal bridge, bulbous/prominent nose, short philtrum, thin lips, retrognathia/micrognathia, arched/cleft palate, and dental anomalies. Additional variable manifestations include hearing and visual impairment, seizures, joint anomalies, obesity, and behavioral/psychiatric disorders.","definition_xrefs":["Orphanet:529962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 17","termid":"MONDO:0016915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"17q24.2 microdeletion syndrome","secondary_identifiers":["UMLS:C5680185","GARD:22202","MEDGEN:1808156"],"synonyms":[{"name":"Del(17)(q24)","type":"exact"}],"termid":"MONDO:0035151","xrefs":{"Monarch":{"xref_id":"0035151"}}}


id: MONDO:1011743
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nodular dermatofibrosis and kidney disease, non-human animal","secondary_identifiers":["OMIA:001195"],"termid":"MONDO:1011743","xrefs":{"Monarch":{"xref_id":"1011743"}}}


id: MONDO:0021271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A villous adenoma that involves the colon.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"villous adenoma","termid":"MONDO:0000502"},{"relation_name":"is_a","term_name":"colon adenoma","termid":"MONDO:0000527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"villous adenoma of colon","secondary_identifiers":["MEDGEN:56207","SCTID:309084001","UMLS:C0149862","NCIT:C3495"],"synonyms":[{"name":"colon villous adenoma","type":"exact"},{"name":"colonic villous adenoma","type":"exact"},{"name":"villous adenoma of the colon","type":"exact"}],"termid":"MONDO:0021271","xrefs":{"Monarch":{"xref_id":"0021271"}}}


id: PBO:0062190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily Q member 2 (gene/pseudogene)","termid":"PBO:0062190"}


id: MONDO:0000973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign adipose tissue neoplasm of the external ear.","definition_xrefs":["NCIT:C4618"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"},{"relation_name":"is_a","term_name":"external ear neoplasm","termid":"MONDO:0021235"},{"relation_name":"is_a","term_name":"benign neoplasm of ear","termid":"MONDO:0021474"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"external ear lipoma","secondary_identifiers":["MEDGEN:91130","ICD9:215.0","SCTID:188988008","UMLS:C0347423","DOID:10203"],"synonyms":[{"name":"external Ear lipoma","type":"exact"},{"name":"external auditory meatus lipoma","type":"exact"},{"name":"external ear lipoma","type":"exact"},{"name":"lipoma of external Ear","type":"exact"},{"name":"lipoma of external auditory meatus","type":"exact"},{"name":"lipoma of external ear","type":"exact"},{"name":"lipoma of the external Ear","type":"exact"},{"name":"lipoma of the external auditory meatus","type":"exact"},{"name":"lipoma of the external ear","type":"exact"}],"termid":"MONDO:0000973","xrefs":{"Monarch":{"xref_id":"0000973"}}}


id: SO:0000004
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A coding exon that is not the most 3-prime or the most 5-prime in a given transcript.","direct_ancestors":[{"relation_name":"is_a","term_name":"coding_exon","termid":"SO:0000195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interior_coding_exon","synonyms":[{"name":"interior coding exon","type":"exact"}],"termid":"SO:0000004"}


id: PBO:0044858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta 4-desaturase, sphingolipid 1","termid":"PBO:0044858"}


id: PBO:0053696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 896","termid":"PBO:0053696"}


id: GO:0008626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals induced by granzymes which triggers the apoptotic death of a cell. The pathway starts with reception of a granzyme signal, and ends when the execution phase of apoptosis is triggered. Granzymes are serine proteases that are secreted by cytotoxic T cells and natural killer cells to induce apoptosis in target cells.","definition_xrefs":["GOC:mtg_apoptosis","PMID:17158907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic signaling pathway","termid":"GO:0097190"},{"relation_name":"is_a","term_name":"granzyme-mediated programmed cell death signaling pathway","termid":"GO:0140507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"granzyme-mediated apoptotic signaling pathway","synonyms":[{"name":"apoptotic signaling pathway in response to granzyme","type":"related"},{"name":"induction of apoptosis by granzyme","type":"related"}],"termid":"GO:0008626"}


id: PR:Q9UTM8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC139.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTM8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-semialdehyde dehydrogenase C139.05 [NADP(+)] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC139.05","synonyms":[{"name":"SSDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC139.05","type":"exact"}],"termid":"PR:Q9UTM8"}


id: PBO:0001246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein Mdm31 (predicted)","termid":"PBO:0001246"}


id: GO:0141156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette that starts with production of cyclic AMP (cAMP) by adenylate cyclase (either transmembrane or soluble), which activates protein kinase A, and ends with activation of downstream effectors such as the transcription factor CREB that further transmit the signal within the cell.","definition_xrefs":["PMID:23209152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signaling cassette","termid":"GO:0141124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cAMP/PKA signal transduction","synonyms":[{"name":"PKA signaling","type":"broad"},{"name":"cAMP signaling","type":"broad"},{"name":"cAMP/PKA signaling cassette","type":"exact"},{"name":"protein kinase A signaling","type":"broad"}],"termid":"GO:0141156"}


id: GO:1904863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of beta-catenin-TCF complex assembly.","definition_xrefs":["GOC:bf","GO_REF:0000058","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"beta-catenin-TCF complex assembly","termid":"GO:1904837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"regulation of beta-catenin-TCF complex assembly","synonyms":[{"name":"regulation of beta-catenin-TCF complex formation","type":"exact"},{"name":"regulation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"regulation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"regulation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"regulation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"regulation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"regulation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"}],"termid":"GO:1904863"}


id: GO:0045146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The activation, by acetate, of the chemical reactions and pathways resulting in the breakdown of acetate.","definition_xrefs":["PMID:11741859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"initiation of acetate catabolic process","termid":"GO:0043077"},{"relation_name":"part_of","term_name":"response to acetate","termid":"GO:0010034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"initiation of acetate catabolic process by acetate","synonyms":[{"name":"initiation of acetate breakdown by acetate","type":"exact"},{"name":"initiation of acetate degradation by acetate","type":"exact"}],"termid":"GO:0045146"}


id: MOD:01842
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts two L-cysteine residues to S-(2-aminovinyl)-L-cysteine.","definition_xrefs":["RESID:AA0548","PubMed:20805503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-(2-aminovinyl)-cysteine","termid":"MOD:01851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(2-aminovinyl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(Z)-2-aminoethenyl]sulfanyl)propanoic acid","type":"exact"},{"name":"(R,Z)-S-(2-aminovinyl)cysteine","type":"exact"},{"name":"S-(2-aminovinyl)-L-cysteine","type":"exact"}],"termid":"MOD:01842"}


id: PBO:0017579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-phosphoadenosine 5'-phosphosulfate/ 5'-adenylyl sulfate transmembrane transporter (predicted)","termid":"PBO:0017579"}


id: PBO:0044925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol kinase beta","termid":"PBO:0044925"}


id: MONDO:0000633
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"}]},"cv_name":"mondo","definition":"A benign neoplasm that involves the sense organ.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system benign neoplasm","termid":"MONDO:0000648"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"is_obsolete":false,"name":"sensory organ benign neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060096"],"synonyms":[{"name":"sense organ benign neoplasm","type":"exact"}],"termid":"MONDO:0000633","terms_by_termid":{"MONDO:0008097":null},"xrefs":{"Monarch":{"xref_id":"0000633"}}}


id: MONDO:0015377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cysts and fistulae of the face and oral cavity","termid":"MONDO:0015476"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"third branchial cleft anomaly","secondary_identifiers":["MEDGEN:850398","UMLS:C3874314","Orphanet:141030","SCTID:73391000119102","GARD:19935"],"synonyms":[{"name":"third branchial cleft cyst","type":"exact"},{"name":"third branchial cleft fistula","type":"exact"}],"termid":"MONDO:0015377","xrefs":{"Monarch":{"xref_id":"0015377"}}}


id: PBO:0011074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-methyl-2-oxobutanoatehydroxymethyltransferase (predicted)","termid":"PBO:0011074"}


id: PBO:0042043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 96","termid":"PBO:0042043"}


id: PBO:0001200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-anchor transamidase complex subunit Gaa1 (predicted)","termid":"PBO:0001200"}


id: PATO:0000333
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color pattern inhering in a bearer by virtue of bearer's being marked with a round area of different hue or degree of saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-colored","termid":"PATO:0001533"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spotted","termid":"PATO:0000333"}


id: MONDO:0020081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete macrophage or histiocytic tumor (obsolete MONDO:0020081)","secondary_identifiers":["Orphanet:98288"],"termid":"MONDO:0020081","xrefs":{"Monarch":{"xref_id":"0020081"}}}


id: MONDO:0011408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant spastic paraplegia type 10 (SPG10) is a rare type of hereditary spastic paraplegia that can present as either a pure form of spastic paraplegia with lower limb spasticity, hyperreflexia and extensor plantar responses, presenting in childhood or adolescence, or as a complex phenotype associated with additional manifestations including peripheral neuropathy with upper limb amyotrophy, moderate intellectual disability and parkinsonism. Deafness and retinitis pigmentosa were reported in one case.","definition_xrefs":["Orphanet:100991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 10","secondary_identifiers":["MEDGEN:349003","DOID:0110763","GARD:9590","OMIM:604187","MESH:C537482","SCTID:732948003","UMLS:C1858712"],"synonyms":[{"name":"KIF5A hereditary spastic paraplegia","type":"exact"},{"name":"SPG10","type":"exact"},{"name":"autosomal dominant spastic paraplegia","type":"related"},{"name":"autosomal dominant spastic paraplegia 10","type":"exact"},{"name":"autosomal dominant spastic paraplegia type 10","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in KIF5A","type":"exact"},{"name":"hereditary spastic paraplegia type 10","type":"exact"},{"name":"spastic paraplegia 10","type":"related"},{"name":"spastic paraplegia 10 with or without peripheral neuropathy","type":"related"},{"name":"spastic paraplegia 10, autosomal dominant","type":"related"}],"termid":"MONDO:0011408","xrefs":{"Monarch":{"xref_id":"0011408"}}}


id: PBO:0067912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 214","termid":"PBO:0067912"}


id: GO:0035505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of myosin light chain kinase activity.","definition_xrefs":["GOC:bf","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of myosin light chain kinase activity (obsolete GO:0035505)","termid":"GO:0035505"}


id: PBO:0004523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-6-phosphate isomerase (predicted)","termid":"PBO:0004523"}


id: MONDO:0006848
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The lack of sufficient energy or protein to meet the body's metabolic demands, as a result of either an inadequate dietary intake of protein, intake of poor quality dietary protein, increased demands due to disease, or increased nutrient losses.","definition_xrefs":["EFO:1001033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-energy malnutrition","termid":"MONDO:0001371"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"marasmus","secondary_identifiers":["SCTID:29740003","DOID:12328","MedDRA:10026820","ICD10CM:E41","MEDGEN:39251","ICD9:261","UMLS:C0086588"],"synonyms":[{"name":"nutritional atrophy","type":"exact"},{"name":"nutritional marasmus","type":"exact"}],"termid":"MONDO:0006848","xrefs":{"Monarch":{"xref_id":"0006848"}}}


id: FYPO:0005853
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which filamentous actin (F-actin) is present in the cytoplasm in the form of dense, irregularly shaped aggregates.","definition_xrefs":["PMID:12764130","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton morphology during vegetative growth","termid":"FYPO:0000350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0004803","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"aggregated filamentous actin in cytoplasm","synonyms":[{"name":"aggregated cytoplasmic filamentous actin","type":"exact"},{"name":"aggregated filamentous actin in cytoplasm during mitotic cell cycle","type":"related"},{"name":"F-actin accumulation in cytoplasm","type":"related"},{"name":"aggregated F- actin in cytoplasm","type":"exact"},{"name":"aggregated cytoplasmic F-actin","type":"exact"},{"name":"aggregated filamentous actin in cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0005853"}


id: PBO:0001256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phytochelatin synthetase","termid":"PBO:0001256"}


id: GO:0002352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process leading to negative selection in B cells. Mechanisms of negative selection include anergy and deletion.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell selection","termid":"GO:0002339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell negative selection","synonyms":[{"name":"B lymphocyte negative selection","type":"exact"},{"name":"B-cell negative selection","type":"exact"},{"name":"B-lymphocyte negative selection","type":"exact"}],"termid":"GO:0002352"}


id: MONDO:1012932
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary chondrodysplasia that occurs in cats due to a mutation in the UGDH gene.","definition_xrefs":["PMID:32605545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia, domestic cat","termid":"MONDO:1011195"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondrodysplasia, UGDH-related, domestic cat","secondary_identifiers":["OMIA:002541-9685"],"termid":"MONDO:1012932","xrefs":{"Monarch":{"xref_id":"1012932"}}}


id: MONDO:0013300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Greatly exaggerated width of the mouth, resulting from failure of union of the maxillary and mandibular processes, with extension of the oral orifice toward the ear. The defect may be unilateral or bilateral. (Dorland, 27th ed)","definition_xrefs":["MESH:D008265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facial cleft","termid":"MONDO:0015411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"commissural facial cleft","secondary_identifiers":["ICD9:744.83","icd11.foundation:1460924303","MEDGEN:462142","GARD:16975","OMIM:613545","UMLS:C3150792","Orphanet:141276","SCTID:40159009"],"synonyms":[{"name":"commissural cleft, isolated","type":"related"},{"name":"lateral cleft, isolated","type":"related"},{"name":"macrostomia","type":"exact"},{"name":"macrostomia, isolated","type":"related"},{"name":"transverse cleft, isolated","type":"related"}],"termid":"MONDO:0013300","xrefs":{"Monarch":{"xref_id":"0013300"}}}


id: GO:0008973
data:
  {"annotated_genes":["SJAG_00134"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115339],"is_not":false,"summary":null,"term":"GO:0008973"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribose 1-phosphate = D-ribose 5-phosphate. Also converts 2-deoxy-alpha-D-ribose 1-phosphate into 2-deoxy-D-ribose 5-phosphate.","definition_xrefs":["EC:5.4.2.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular phosphotransferase activity","termid":"GO:0016868"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00134":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphopentomutase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6787329","Reactome:R-HSA-8982667","MetaCyc:PPENTOMUT-RXN"],"synonyms":[{"name":"D-ribose 1,5-phosphomutase activity","type":"related"},{"name":"alpha-D-glucose-1,6-bisphosphate:deoxy-D-ribose-1-phosphate phosphotransferase activity","type":"related"},{"name":"alpha-D-ribose 1,5-phosphomutase activity","type":"related"},{"name":"deoxyribomutase activity","type":"related"},{"name":"deoxyribose phosphomutase activity","type":"related"},{"name":"phosphodeoxyribomutase activity","type":"related"},{"name":"phosphoribomutase activity","type":"related"}],"termid":"GO:0008973","terms_by_termid":{"GO:0008973":null}}


id: MONDO:1012216
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"platelet function defect, non-human animal","termid":"MONDO:1011691"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet function defect, cattle","secondary_identifiers":["OMIA:000803-9913"],"termid":"MONDO:1012216","xrefs":{"Monarch":{"xref_id":"1012216"}}}


id: FYPO:0002834
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at centromeric regions is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at centromere","termid":"FYPO:0000146"},{"relation_name":"is_a","term_name":"decreased chromatin silencing","termid":"FYPO:0002353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"decreased chromatin silencing at centromere","synonyms":[{"name":"decreased chromatin silencing at centromere during mitotic cell cycle","type":"related"},{"name":"decreased chromatin silencing at centromere during vegetative growth","type":"exact"},{"name":"decreased heterochromatin silencing at centromere","type":"related"},{"name":"reduced chromatin silencing at centromere","type":"exact"}],"termid":"FYPO:0002834"}


id: PBO:0084138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity cyclic AMP phosphodiesterase; component of the cAMP-dependent protein kinase signaling system, protects the cell from extracellular cAMP, contains readthrough motif surrounding termination codon","termid":"PBO:0084138"}


id: GO:0047142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: oxidized glutathione + [xanthine dehydrogenase] = reduced glutathione + xanthine-oxidase.","definition_xrefs":["EC:1.8.4.7","MetaCyc:1.8.4.7-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","termid":"GO:0016671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"enzyme-thiol transhydrogenase (glutathione-disulfide) activity","synonyms":[{"name":"[xanthine-dehydrogenase]:oxidized-glutathione S-oxidoreductase activity","type":"related"},{"name":"enzyme-thiol transhydrogenase (glutathione-disulphide) activity","type":"exact"},{"name":"enzyme-thiol transhydrogenase (oxidized-glutathione) activity","type":"exact"},{"name":"glutathione-dependent thiol:disulfide oxidoreductase activity","type":"related"},{"name":"thiol:disulfide oxidoreductase activity","type":"related"},{"name":"thiol:disulphide oxidoreductase activity","type":"related"},{"name":"xanthine-dehydrogenase:glutathione-disulfide S-oxidoreductase activity","type":"related"},{"name":"xanthine-dehydrogenase:oxidized-glutathione S-oxidoreductase activity","type":"related"}],"termid":"GO:0047142"}


id: PR:O59709
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- git7 gene.","definition_xrefs":["UniProtKB:O59709","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-insensitive transcription protein 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36.12c","synonyms":[{"name":"Spom972h-git7","type":"exact"}],"termid":"PR:O59709"}


id: PBO:0074623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 21B","termid":"PBO:0074623"}


id: MOD:00112
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-12-hydroxyfarnesyl-L-cysteine.","definition_xrefs":["Unimod:376","PubMed:17790543","RESID:AA0103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenylated cysteine","termid":"MOD:01110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"},{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:01155","MOD:00905"],"is_obsolete":false,"name":"S-12-hydroxyfarnesyl-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2E,6E,10Z)-12-hydroxy-3,7,11-trimethyldodeca-2,6,10-trien-1-yl]sulfanyl)propanoic acid","type":"exact"},{"name":"2-amino-3-(12-hydroxy-3,7,11-trimethyl-3,6,10-dodecatrienylthio)propanoic acid","type":"exact"},{"name":"Hydroxyfarnesyl","type":"related"},{"name":"LIPID S-12-hydroxyfarnesyl cysteine","type":"exact"},{"name":"S-12-hydroxyfarnesyl-L-cysteine","type":"exact"},{"name":"S12HyFarnCys","type":"exact"},{"name":"hydroxyfarnesyl","type":"related"}],"termid":"MOD:00112"}


id: SO:0002077
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that intersects the 5' UTR of an incompletely annotated transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete_transcript_variant","termid":"SO:0002075"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incomplete_transcript_5UTR_variant","secondary_identifiers":["http://annovar.openbioinformatics.org/en/latest/user-guide/gene/"],"synonyms":[{"name":"ANNOVAR:ncRNA_UTR5","type":"exact"},{"name":"incomplete transcript 5UTR variant","type":"exact"}],"termid":"SO:0002077"}


id: GO:0070300
data:
  {"annotated_genes":["SJAG_03563","SJAG_00368"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105703,106086],"is_not":false,"summary":null,"term":"GO:0070300"}]},"cv_name":"molecular_function","definition":"Binding to phosphatidic acid, any of a class of glycerol phosphate in which both the remaining hydroxyl groups of the glycerol moiety are esterified with fatty acids.","definition_xrefs":["GOC:jp","CHEBI:16337","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid binding","termid":"GO:0005543"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00368":null,"SJAG_03563":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"phosphatidic acid binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidate binding","type":"exact"}],"termid":"GO:0070300","terms_by_termid":{"GO:0070300":null}}


id: FYPO:0003921
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at abnormal replication fork arrest at sites within the eukaryotic rDNA repeat spacer occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest at rDNA repeats","termid":"FYPO:0003089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"increased replication fork arrest at rDNA repeats","synonyms":[{"name":"increased replication fork arrest at rDNA repeats during mitotic cell cycle","type":"related"},{"name":"increased replication fork arrest at rDNA repeats during vegetative growth","type":"exact"},{"name":"increased replication fork arrest at ribosomal DNA repeats","type":"exact"}],"termid":"FYPO:0003921"}


id: GO:0032396
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a MHC class I protein complex to mediate signaling that inhibits activation of a lymphocyte.","definition_xrefs":["PMID:9368779","PMID:9597134","GOC:add","PMID:11858820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC class I receptor activity","termid":"GO:0032393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"inhibitory MHC class I receptor activity","termid":"GO:0032396"}


id: GO:0034628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide (NAD), beginning with the synthesis of aspartate from simpler precursors; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH.","definition_xrefs":["GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate metabolic process","termid":"GO:0006531"},{"relation_name":"is_a","term_name":"'de novo' NAD biosynthetic process","termid":"GO:0034627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520","GO:0055086"],"is_obsolete":false,"name":"'de novo' NAD biosynthetic process from aspartate","secondary_identifiers":["GO:0019355"],"synonyms":[{"name":"de novo NAD biosynthetic process from aspartate","type":"related"},{"name":"nicotinamide nucleotide anabolism from aspartate","type":"exact"},{"name":"nicotinamide nucleotide biosynthetic process from aspartate","type":"exact"},{"name":"nicotinamide nucleotide formation from aspartate","type":"exact"},{"name":"nicotinamide nucleotide synthesis from aspartate","type":"exact"}],"termid":"GO:0034628"}


id: GO:0103015
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (Kdo)2-lipid A + 2 4-amino-4-deoxy-alpha-L-arabinopyranosyl di-trans,poly-cis-undecaprenyl phosphate = (beta-L-Ara4N)2-(KDO)2-lipid A + 2 ditrans,polycis-undecaprenyl phosphate.","definition_xrefs":["EC:2.4.2.43","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"4-amino-4-deoxy-L-arabinose transferase activity","secondary_identifiers":["RHEA:35371","MetaCyc:RXN0-2001"],"termid":"GO:0103015"}


id: GO:0030795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a jasmonate = S-adenosyl-L-homocysteine + a methyljasmonate.","definition_xrefs":["RHEA:13349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"methyl jasmonate methylesterase activity","secondary_identifiers":["GO:0102078","GO:0045546","EC:2.1.1.141","MetaCyc:RXN-10768"],"synonyms":[{"name":"S-adenosyl-L-methionine:jasmonate O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:jasmonic acid carboxyl methyltransferase activity","type":"exact"},{"name":"jasmonic acid carboxyl methyltransferase activity","type":"related"}],"termid":"GO:0030795"}


id: PBO:0054602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2006","termid":"PBO:0054602"}


id: MONDO:0014818
data:
  {"annotated_genes":["SJAG_03182"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85314],"is_not":false,"summary":null,"term":"MONDO:0014818"}]},"cv_name":"mondo","definition":"Any familial nephrotic syndrome in which the cause of the disease is a mutation in the NUP205 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial idiopathic steroid-resistant nephrotic syndrome","termid":"MONDO:0019006"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03182":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome, type 13","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16167","MEDGEN:900240","OMIM:616893","DOID:0080381","UMLS:C4225165"],"synonyms":[{"name":"NPHS13","type":"exact"},{"name":"NUP205 familial nephrotic syndrome","type":"exact"},{"name":"familial nephrotic syndrome caused by mutation in NUP205","type":"exact"},{"name":"nephrotic syndrome, type 13","type":"exact"},{"name":"nephrotic syndrome, type 13; NPHS13","type":"exact"}],"termid":"MONDO:0014818","terms_by_termid":{"MONDO:0014818":null},"xrefs":{"Monarch":{"xref_id":"0014818"}}}


id: GO:0061370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of testosterone, an androgen having 17beta-hydroxy and 3-oxo groups, together with unsaturation at C-4 C-5.","definition_xrefs":["GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"testosterone biosynthetic process","termid":"GO:0061370"}


id: GO:0019339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of parathion, a highly toxic organophosphate compound. Degradation of parathion by sunlight or liver enzymes can result in the formation of the active compound paraoxon which interferes with the nervous system through cholinesterase inhibition.","definition_xrefs":["MetaCyc:PARATHION-DEGRADATION-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parathion metabolic process","termid":"GO:0018952"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"parathion catabolic process","secondary_identifiers":["UM-BBD_pathwayID:pthn"],"synonyms":[{"name":"parathion breakdown","type":"exact"},{"name":"parathion catabolism","type":"exact"},{"name":"parathion degradation","type":"exact"}],"termid":"GO:0019339"}


id: PBO:0086987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Repressible vacuolar alkaline phosphatase; controls polyphosphate content; regulated by levels of Pi and by Pho4p, Pho9p, Pho80p, Pho81p and Pho85p; dephosphorylates phosphotyrosyl peptides; contributes to NAD+ metabolism by producing nicotinamide riboside from NMN","termid":"PBO:0086987"}


id: GO:0061010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the gallbladder over time, from its initial formation to the mature structure. The gallbladder is a cavitated organ that stores bile.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"hepaticobiliary system development","termid":"GO:0061008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gallbladder development","termid":"GO:0061010"}


id: PBO:0002253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional regulator Pcc1 (predicted)","termid":"PBO:0002253"}


id: GO:0034308
data:
  {"annotated_genes":["SJAG_03362","SJAG_01742","SJAG_04067","SJAG_03370","SJAG_00381","SJAG_02406","SJAG_04866","SJAG_03786","SJAG_00827","SJAG_02420","SJAG_03743","SJAG_02421","SJAG_01970","SJAG_01414","SJAG_03822","SJAG_02047","SJAG_03538","SJAG_04282","SJAG_05006","SJAG_00240"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006068"},{"annotations":[98228,87981,114110,98229,114111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019655"},{"annotations":[96064],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2001172"},{"annotations":[88514,113177],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[113090,113501,115517,93777,106867,99024,113084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[58605,99026,65695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006772"},{"annotations":[99027,109940,109939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving primary alcohols. A primary alcohol is any alcohol in which a hydroxy group, -OH, is attached to a saturated carbon atom which has either three hydrogen atoms attached to it or only one other carbon atom and two hydrogen atoms attached to it.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00240":null,"SJAG_00381":null,"SJAG_00827":null,"SJAG_01414":null,"SJAG_01742":null,"SJAG_01970":null,"SJAG_02047":null,"SJAG_02406":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_03362":null,"SJAG_03370":null,"SJAG_03538":null,"SJAG_03743":null,"SJAG_03786":null,"SJAG_03822":null,"SJAG_04067":null,"SJAG_04282":null,"SJAG_04866":null,"SJAG_05006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"primary alcohol metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"monohydric alcohol metabolic process","type":"exact"},{"name":"primary alcohol metabolism","type":"exact"}],"termid":"GO:0034308","terms_by_termid":{"GO:0006068":null,"GO:0006772":null,"GO:0009228":null,"GO:0019655":null,"GO:0036172":null,"GO:0090180":null,"GO:2001172":null}}


id: PR:Q10254
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00454"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.06c","secondary_identifiers":["UniProtKB:Q10254"],"synonyms":[{"name":"Spom972h-ALG10B","type":"exact"},{"name":"alpha-1,2-glucosyltransferase alg10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"alpha-2-glucosyltransferase alg10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"asparagine-linked glycosylation protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"dolichyl-phosphoglucose-dependent glucosyltransferase alg10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10254"}


id: GO:0005436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + phosphate(out) = Na+(in) + phosphate(in).","definition_xrefs":["TC:2.A.1.14.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate transmembrane transporter activity","termid":"GO:0005315"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"sodium:phosphate symporter activity","secondary_identifiers":["Reactome:R-HSA-427605","Reactome:R-HSA-5625123","Reactome:R-HSA-5651697","Reactome:R-HSA-5651971","Reactome:R-HSA-428609","Reactome:R-HSA-427656","Reactome:R-HSA-427645","Reactome:R-HSA-5651685","Reactome:R-HSA-5687585","GO:0015321","Reactome:R-HSA-2872498"],"synonyms":[{"name":"sodium-dependent phosphate transmembrane transporter activity","type":"related"},{"name":"sodium/phosphate symporter activity","type":"exact"}],"termid":"GO:0005436"}


id: GO:2000523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T cell costimulation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell activation","termid":"GO:0050863"},{"relation_name":"is_a","term_name":"regulation of leukocyte cell-cell adhesion","termid":"GO:1903037"},{"relation_name":"regulates","term_name":"T cell costimulation","termid":"GO:0031295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of T cell costimulation","synonyms":[{"name":"regulation of T cell co-stimulation","type":"exact"},{"name":"regulation of T lymphocyte costimulation","type":"exact"},{"name":"regulation of T-cell co-stimulation","type":"exact"},{"name":"regulation of T-cell costimulation","type":"exact"},{"name":"regulation of T-lymphocyte costimulation","type":"exact"}],"termid":"GO:2000523"}


id: FYPO:0005385
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the first meiotic nuclear division (part of the meiotic cell cycle) is arrested in metaphase under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abolished mitotic sister chromatid separation","termid":"FYPO:0001946"},{"relation_name":"is_a","term_name":"abnormally arrested meiosis I","termid":"FYPO:0002817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abnormal cell cycle arrest in meiotic metaphase I","secondary_identifiers":["FYPO:0006769"],"synonyms":[{"name":"abnormal cell cycle arrest in metaphase I","type":"exact"},{"name":"abnormal cell cycle arrest in metaphase I during meiotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest in metaphase during first meiotic nuclear division","type":"exact"},{"name":"abnormal cell cycle arrest in metaphase of meiosis I","type":"exact"},{"name":"abnormal meiotic cell cycle arrest in metaphase I","type":"exact"},{"name":"abolished meiosis I metaphase/anaphase transition","type":"related"}],"termid":"FYPO:0005385"}


id: PBO:0091654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane uricil/uridine transmembrane transporter transmembrane transporter family","termid":"PBO:0091654"}


id: GO:0018830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gamma-hexachlorocyclohexane + HCl = 1,3(R),4(S),5(S),6(R)-pentachlorocyclohexene.","definition_xrefs":["UM-BBD_enzymeID:e0359"],"gene_count":0,"genotype_count":0,"name":"obsolete gamma-hexachlorocyclohexane dehydrochlorinase activity (obsolete GO:0018830)","termid":"GO:0018830"}


id: PBO:0066692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RMDN2 antisense RNA 1","termid":"PBO:0066692"}


id: PBO:0116207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase, implicated in vacuole related processes","termid":"PBO:0116207"}


id: PBO:0063225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 10","termid":"PBO:0063225"}


id: PBO:0049983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxia inducible lipid droplet associated","termid":"PBO:0049983"}


id: GO:0072132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a mesenchymal tissue are generated and organized. A mesenchymal tissue is made up of loosely packed stellate cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"mesenchyme development","termid":"GO:0060485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchyme morphogenesis","termid":"GO:0072132"}


id: PBO:0074063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 39 pseudogene 1","termid":"PBO:0074063"}


id: MONDO:0004344
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant hemangiopericytoma occurring in childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangiopericytoma, malignant","termid":"MONDO:0009330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood malignant hemangiopericytoma","secondary_identifiers":["UMLS:C0279983","MEDGEN:124686","DOID:7731","NCIT:C8090"],"synonyms":[{"name":"malignant childhood hemangiopericytoma","type":"exact"},{"name":"malignant hemangiopericytoma","type":"broad"},{"name":"malignant paediatric hemangiopericytoma","type":"exact"},{"name":"malignant pediatric hemangiopericytoma","type":"exact"}],"termid":"MONDO:0004344","xrefs":{"Monarch":{"xref_id":"0004344"}}}


id: PBO:0090763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial copper chaperone for cytochrome c oxidase Sco1","termid":"PBO:0090763"}


id: PBO:0028863
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mRNA_level_during_vegetative_growth","termid":"PBO:0028863"}


id: MONDO:0020814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"miliaria","termid":"MONDO:0006580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"miliaria alba","secondary_identifiers":["SCTID:201191004","MEDGEN:590455","UMLS:C0406493"],"termid":"MONDO:0020814","xrefs":{"Monarch":{"xref_id":"0020814"}}}


id: GO:0001512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-(beta-D-ribofuranosyl)-1,4-dihydronicotinamide + a quinone = 1-(beta-D-ribofuranosyl)nicotinamide + a hydroquinone.","definition_xrefs":["RHEA:12364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors","termid":"GO:0016679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"dihydronicotinamide riboside quinone reductase activity","secondary_identifiers":["Reactome:R-HSA-8936519","EC:1.10.5.1","MetaCyc:1.10.99.2-RXN"],"synonyms":[{"name":"N-ribosyldihydronicotinamide dehydrogenase (quinone) activity","type":"related"},{"name":"NQO2","type":"related"},{"name":"NQO2 activity","type":"related"},{"name":"NRH:quinone oxidoreductase 2 activity","type":"narrow"},{"name":"QR2 activity","type":"related"},{"name":"quinone reductase 2 activity","type":"related"},{"name":"ribosyldihydronicotinamide dehydrogenase (quinone) activity","type":"exact"}],"termid":"GO:0001512"}


id: GO:0061538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of histamine by a cell, in which the histamine acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histamine secretion","termid":"GO:0001821"},{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"aromatic amino acid transport","termid":"GO:0015801"},{"relation_name":"is_a","term_name":"L-amino acid transport","termid":"GO:0015807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"histamine secretion, neurotransmission","termid":"GO:0061538"}


id: GO:0071906
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CRD (context dependent regulatory) domain, a domain of about 130 residues that is the most divergent region among the LEF/TCF proteins.","definition_xrefs":["PMID:19460168","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"CRD domain binding","synonyms":[{"name":"context dependent regulatory domain binding","type":"exact"}],"termid":"GO:0071906"}


id: PBO:0086901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transporter of the MRP subfamily; contains a stop codon in S288C; adjacent ORFs YKR103W and YKR104W are merged in different strain backgrounds; MRP stands for multidrug resistance-associated protein","termid":"PBO:0086901"}


id: MONDO:0016922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal duplication","termid":"MONDO:0000762"},{"relation_name":"is_a","term_name":"chromosome 2 disorder","termid":"MONDO:0700009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of chromosome 2","secondary_identifiers":["SCTID:726340005","MEDGEN:1372476","GARD:20843","UMLS:C4518490","Orphanet:262196"],"synonyms":[{"name":"partial duplication of chromosome type 2","type":"exact"},{"name":"partial trisomy of chromosome 2","type":"exact"}],"termid":"MONDO:0016922","xrefs":{"Monarch":{"xref_id":"0016922"}}}


id: GO:0072740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an anisomycin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to anisomycin","termid":"GO:0072739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to anisomycin","termid":"GO:0072740"}


id: PBO:0065407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha 6 pseudogene 3","termid":"PBO:0065407"}


id: MOD:00633
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"bis-N-I-sulfonerahodamine","synonyms":[{"name":"Xlink:B10621","type":"related"},{"name":"bis-((N-iodoacetyl)piperazinyl)sulfonerhodamine","type":"exact"},{"name":"bis-N-I-sulfonerahodamine","type":"related"}],"termid":"MOD:00633"}


id: PBO:0066189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 11 pseudogene 1","termid":"PBO:0066189"}


id: PBO:0052410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, two Ig domains and short cytoplasmic tail 4","termid":"PBO:0052410"}


id: GO:0102998
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (5-oxo-2-sulfonato-2,5-dihydrofuran-2-yl)acetate + H2O = maleylacetate + sulfite + 2 H+.","definition_xrefs":["EC:3.1.1.92"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"4-sulfomuconolactone hydrolase activity","secondary_identifiers":["MetaCyc:RXN-9733","RHEA:33711","UM-BBD_reactionID:r0583"],"termid":"GO:0102998"}


id: MONDO:0004112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the bladder due to irradiation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystitis","termid":"MONDO:0006032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiation cystitis","secondary_identifiers":["ICD10CM:N30.4","DOID:7127","ICD9:595.82","NCIT:C123174","MEDGEN:510221","SCTID:11251000","UMLS:C0156270"],"synonyms":[{"name":"irradiation cystitis","type":"exact"}],"termid":"MONDO:0004112","xrefs":{"Monarch":{"xref_id":"0004112"}}}


id: PBO:0039809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF4 antisense RNA 1","termid":"PBO:0039809"}


id: MONDO:0013343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"C1q deficiency is a rare disorder associated with recurrent skin lesions, chronic infections, systemic lupus erythematosus (SLE) or SLE-like diseases. It has also been associated with a kidney disease known as mesangial proliferative glomerulonephritis. C1q is a complex and together with other proteins, C1r and C1s, it forms the C1 complex. This complex is important for the activation of the complement system (a group of proteins that work with the immune system). It also disposes cells that are dead. C1q deficiency presents in 2 different forms, absent C1q protein or abnormal C1q protein. Symptoms include infections (ear infections (otitis media), meningitis, urinary tract infections, oral infections); skin lesions (small blisters (vesicles), dark patches, and atrophic areas) that get worse upon light exposure; cataracts; loss of eyelashes, eyebrows, and scalp hair; blood in urine; and glomerulonephritis. About 93% of cases are associated with systemic lupus erythematosus. It can be caused by mutations in the C1QA, C1QB or C1QC genes and is inherited in an autosomal recessive pattern. Treatment depends on the symptoms. Recently, it was shown that C1q production can be restored by allogeneic hematopoietic stem cell transplantation, a procedure in which a person receives blood-forming stem cells (cells from which all blood cells develop) from a genetically similar, but not identical donor.","definition_xrefs":["PMID:29449492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency due to a classical component pathway complement deficiency","termid":"MONDO:0015699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"C1Q deficiency","secondary_identifiers":["NANDO:2200777","NCIT:C119990","GARD:12958","UMLS:C3150902","OMIMPS:613652","MEDGEN:462252"],"synonyms":[{"name":"C1Q deficiency","type":"exact"},{"name":"C1QD","type":"exact"},{"name":"C1q deficiency","type":"exact"}],"termid":"MONDO:0013343","xrefs":{"Monarch":{"xref_id":"0013343"}}}


id: PBO:0065618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 phosphatase activator","termid":"PBO:0065618"}


id: GO:1900978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tatiopterin metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phosphorus metabolic process","termid":"GO:0010563"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of tatiopterin metabolic process","termid":"GO:1900977"},{"relation_name":"negatively_regulates","term_name":"tatiopterin metabolic process","termid":"GO:1900869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tatiopterin metabolic process","synonyms":[{"name":"down regulation of tatiopterin metabolic process","type":"exact"},{"name":"down regulation of tatiopterin metabolism","type":"exact"},{"name":"down-regulation of tatiopterin metabolic process","type":"exact"},{"name":"down-regulation of tatiopterin metabolism","type":"exact"},{"name":"downregulation of tatiopterin metabolic process","type":"exact"},{"name":"downregulation of tatiopterin metabolism","type":"exact"},{"name":"inhibition of tatiopterin metabolic process","type":"narrow"},{"name":"inhibition of tatiopterin metabolism","type":"exact"},{"name":"negative regulation of tatiopterin metabolism","type":"exact"}],"termid":"GO:1900978"}


id: PBO:0051583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 18","termid":"PBO:0051583"}


id: GO:0043759
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 2-methylbutanoate + CoA = AMP + diphosphate + 2-methylbutanoyl-CoA.","definition_xrefs":["RHEA:46180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acid-CoA ligase activity","termid":"GO:0031955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"2-methylbutanoate-CoA ligase activity","synonyms":[{"name":"branched chain acyl CoA synthetase (ADP-forming) activity","type":"exact"},{"name":"branched chain acyl-CoA synthetase (ADP-forming) activity","type":"exact"},{"name":"branched-chain acyl CoA synthetase (ADP-forming) activity","type":"exact"},{"name":"branched-chain acyl-CoA synthetase (ADP-forming) activity","type":"related"}],"termid":"GO:0043759"}


id: PBO:0001567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Imp4 (predicted)","termid":"PBO:0001567"}


id: SO:0001370
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_carboxymethylaminomethyl_2_prime_O_methyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_carboxymethylaminomethyl_two_prime_O_methyluridine","secondary_identifiers":["RNAMOD:078"],"synonyms":[{"name":"5-carboxymethylaminomethyl- 2'-O-methyluridine","type":"exact"},{"name":"cmnm5Um","type":"exact"},{"name":"five carboxymethylaminomethyl two prime O methyluridine","type":"exact"}],"termid":"SO:0001370"}


id: GO:0036290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation by a protein of a residue on an identical protein. For example, phosphorylation by the other kinase within a homodimer.","definition_xrefs":["PMID:20516151","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein autophosphorylation","termid":"GO:0046777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein trans-autophosphorylation","synonyms":[{"name":"trans-autophosphorylation","type":"exact"}],"termid":"GO:0036290"}


id: GO:0010265
data:
  {"annotated_genes":["SJAG_05297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88725],"is_not":false,"summary":null,"term":"GO:0010265"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the SKP1-Cullin/Cdc53-F-box protein ubiquitin ligase (SCF) complex.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05297":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"SCF complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010265","terms_by_termid":{"GO:0010265":null}}


id: PBO:0041467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 10 open reading frame 143","termid":"PBO:0041467"}


id: PBO:0000870
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathionuria","termid":"PBO:0000870"}


id: GO:0071240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a food stimulus; food is anything which, when taken into the body, serves to nourish or build up the tissues or to supply body heat.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to food","termid":"GO:0032094"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to food","termid":"GO:0071240"}


id: GO:0106202
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of amno acids and peptides linked to a decarboxylation reaction.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on amino acids and peptides linked to a decarboxylation reaction (obsolete GO:0106202)","termid":"GO:0106202"}


id: PBO:0046829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5 pseudogene 2","termid":"PBO:0046829"}


id: GO:0048238
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membranes of the smooth endoplasmic reticulum.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum lumen","termid":"GO:0005788"},{"relation_name":"part_of","term_name":"smooth endoplasmic reticulum","termid":"GO:0005790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005783"],"is_obsolete":false,"name":"smooth endoplasmic reticulum lumen","secondary_identifiers":["NIF_Subcellular:sao927884761"],"synonyms":[{"name":"SER lumen","type":"exact"},{"name":"smooth ER lumen","type":"exact"}],"termid":"GO:0048238"}


id: PBO:0012046
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"processive helicase activity of Mcm4/6/7 complex requires 3' and 5' overhangs","termid":"PBO:0012046"}


id: PBO:0112595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein, copper-binding, Cmc2","termid":"PBO:0112595"}


id: PBO:0024854
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cowden syndrome","termid":"PBO:0024854"}


id: SO:0001386
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified glycine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_glycine","secondary_identifiers":["MOD:00908"],"synonyms":[{"name":"ModGly","type":"exact"},{"name":"modified glycine","type":"exact"}],"termid":"SO:0001386"}


id: PBO:0003645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyltransferase complex subunit Alg2 (predicted)","termid":"PBO:0003645"}


id: PBO:0053694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 892","termid":"PBO:0053694"}


id: PBO:0086860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative S-adenosylmethionine-dependent methyltransferase; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively; YMR209C is not an essential gene","termid":"PBO:0086860"}


id: PBO:0078837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon TGG) 3-1","termid":"PBO:0078837"}


id: PBO:0027119
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_azygotic_meiosis_II","termid":"PBO:0027119"}


id: PBO:0074296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAFB like transcription modulator","termid":"PBO:0074296"}


id: MONDO:1011917
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urinary system disorder, non-human animal","termid":"MONDO:1011365"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic hypercalciuria, non-human animal","secondary_identifiers":["OMIA:002384"],"termid":"MONDO:1011917","xrefs":{"Monarch":{"xref_id":"1011917"}}}


id: GO:0072478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about whether the spindle is correctly assembled, and chromosomes are attached to the spindle, is received and converted into a molecular signal, contributing to a mitotic cell cycle spindle assembly checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in mitotic spindle assembly checkpoint (obsolete GO:0072478)","synonyms":[{"name":"detection of stimulus involved in Dma1-dependent checkpoint","type":"narrow"},{"name":"detection of stimulus involved in SAC-independent checkpoint","type":"exact"},{"name":"detection of stimulus involved in mitotic cell cycle spindle assembly checkpoint","type":"exact"},{"name":"mitotic cell cycle spindle assembly checkpoint sensor mechanism","type":"related"},{"name":"mitotic cell cycle spindle assembly checkpoint sensor process","type":"related"},{"name":"perception of stimulus involved in DMA1-dependent checkpoint","type":"related"},{"name":"perception of stimulus involved in SAC-independent checkpoint","type":"related"},{"name":"sensing involved in mitotic cell cycle spindle assembly checkpoint","type":"related"},{"name":"stimulus detection involved in DMA1-dependent checkpoint","type":"narrow"},{"name":"stimulus detection involved in SAC-independent checkpoint","type":"exact"},{"name":"stimulus sensing involved in DMA1-dependent checkpoint","type":"related"},{"name":"stimulus sensing involved in SAC-independent checkpoint","type":"related"}],"termid":"GO:0072478"}


id: MONDO:0014516
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any microcephaly and chorioretinopathy in which the cause of the disease is a mutation in the PLK4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microcephaly and chorioretinopathy","termid":"MONDO:0000181"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly and chorioretinopathy 2","secondary_identifiers":["DOID:0080106","MEDGEN:863825","OMIM:616171","UMLS:C4015388"],"synonyms":[{"name":"MCCRP2","type":"related"},{"name":"PLK4 microcephaly and chorioretinopathy","type":"exact"},{"name":"microcephaly and chorioretinopathy caused by mutation in PLK4","type":"exact"},{"name":"microcephaly and chorioretinopathy type 2","type":"exact"},{"name":"microcephaly and chorioretinopathy, autosomal recessive, 2","type":"related"},{"name":"microcephaly and chorioretinopathy, autosomal recessive, type 2","type":"exact"}],"termid":"MONDO:0014516","xrefs":{"Monarch":{"xref_id":"0014516"}}}


id: PBO:0053859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1132","termid":"PBO:0053859"}


id: GO:0045881
data:
  {"annotated_genes":["SJAG_04853","SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[90209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sporulation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporulation resulting in formation of a cellular spore","termid":"GO:0042173"},{"relation_name":"is_a","term_name":"positive regulation of sporulation","termid":"GO:0043938"},{"relation_name":"positively_regulates","term_name":"sporulation resulting in formation of a cellular spore","termid":"GO:0030435"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02169":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sporulation resulting in formation of a cellular spore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of sporulation","type":"narrow"},{"name":"stimulation of sporulation","type":"narrow"},{"name":"up regulation of sporulation","type":"exact"},{"name":"up-regulation of sporulation","type":"exact"},{"name":"upregulation of sporulation","type":"exact"}],"termid":"GO:0045881","terms_by_termid":{"GO:0075296":null,"GO:1903024":null}}


id: MONDO:0035405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"serous or mucinous cystadenoma of childhood","termid":"MONDO:0016092"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seromucinous cystadenoma of childhood","secondary_identifiers":["Orphanet:563676","ICD10CM:D27","MEDGEN:1702847","UMLS:C5231009","GARD:22258"],"synonyms":[{"name":"Seromucinous cystadenoma of ovary in childhood","type":"exact"}],"termid":"MONDO:0035405","xrefs":{"Monarch":{"xref_id":"0035405"}}}


id: GO:0071253
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a connexin, any of a group of related proteins that assemble to form gap junctions.","definition_xrefs":["PMID:19864490","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"connexin binding","termid":"GO:0071253"}


id: FYPO:0002095
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to a DNA damage stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0002494","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"increased protein phosphorylation during cellular response to DNA damage","synonyms":[{"name":"increased protein phosphorylation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"increased protein phosphorylation during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"increased protein phosphorylation during cellular response to DNA damaging agent","type":"related"},{"name":"increased protein phosphorylation during response to DNA damage stimulus","type":"exact"}],"termid":"FYPO:0002095"}


id: GO:1905194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chloroplast fission.","definition_xrefs":["GOC:TermGenie","PMID:26862170","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of chloroplast fission","termid":"GO:1905192"},{"relation_name":"positively_regulates","term_name":"chloroplast fission","termid":"GO:0010020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chloroplast fission","synonyms":[{"name":"activation of chloroplast division","type":"narrow"},{"name":"activation of chloroplast fission","type":"narrow"},{"name":"positive regulation of chloroplast division","type":"exact"},{"name":"up regulation of chloroplast division","type":"exact"},{"name":"up regulation of chloroplast fission","type":"exact"},{"name":"up-regulation of chloroplast division","type":"exact"},{"name":"up-regulation of chloroplast fission","type":"exact"},{"name":"upregulation of chloroplast division","type":"exact"},{"name":"upregulation of chloroplast fission","type":"exact"}],"termid":"GO:1905194"}


id: PBO:0081006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 43","termid":"PBO:0081006"}


id: PBO:0090054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP-specific glutamate dehydrogenase Gdh1","termid":"PBO:0090054"}


id: GO:0036397
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: formate + a quinone = CO2 + a quinol.","definition_xrefs":["RHEA:48592","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor","termid":"GO:0033695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"formate dehydrogenase (quinone) activity","secondary_identifiers":["MetaCyc:FORMATEDEHYDROG-RXN","KEGG_REACTION:R09494","EC:1.17.5.3"],"synonyms":[{"name":"Fdh-N activity","type":"related"},{"name":"formate dehydrogenase-N activity","type":"related"},{"name":"formate:quinone oxidoreductase activity","type":"related"}],"termid":"GO:0036397"}


id: PBO:0017444
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-produces","termid":"PBO:0017444"}


id: PBO:0076037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 33 pseudogene 1","termid":"PBO:0076037"}


id: MONDO:1011608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vitamin-K-dependent blood coagulation factors deficiency that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin-K-dependent blood coagulation factors deficiency, non-human animal","termid":"MONDO:1011410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin-K-dependent blood coagulation factors deficiency, dog","secondary_identifiers":["OMIA:001054-9615"],"termid":"MONDO:1011608","xrefs":{"Monarch":{"xref_id":"1011608"}}}


id: MONDO:0023041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ectodermal dysplasia Berlin type (obsolete MONDO:0023041)","termid":"MONDO:0023041","xrefs":{"Monarch":{"xref_id":"0023041"}}}


id: PBO:0081192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZIC4 antisense RNA 1","termid":"PBO:0081192"}


id: GO:0045498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the sex comb over time, from its formation to the mature structure. The sex combs are the male specific chaetae located on the prothoracic tarsal segment of the prothoracic leg.","direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sex comb development","termid":"GO:0045498"}


id: PBO:0073003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel beta subunit 3","termid":"PBO:0073003"}


id: GO:0140972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of AIM2 inflammasome complex assembly.","definition_xrefs":["PMID:33467177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of AIM2 inflammasome complex assembly","termid":"GO:0140971"},{"relation_name":"negatively_regulates","term_name":"AIM2 inflammasome complex assembly","termid":"GO:0140970"},{"relation_name":"part_of","term_name":"negative regulation of inflammasome-mediated signaling pathway","termid":"GO:0141086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"negative regulation of AIM2 inflammasome complex assembly","termid":"GO:0140972"}


id: FYPO:0003254
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of arginine into the cell is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished amino acid import during vegetative growth","termid":"FYPO:0003253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abolished arginine import","synonyms":[{"name":"abolished L-arginine import across plasma membrane","type":"exact"},{"name":"abolished L-arginine import into cell","type":"exact"},{"name":"abolished arginine import during mitotic cell cycle","type":"related"},{"name":"abolished arginine import during vegetative growth","type":"exact"},{"name":"abolished arginine import into cell","type":"exact"},{"name":"abolished arginine uptake","type":"exact"},{"name":"arginine import abolished","type":"exact"}],"termid":"FYPO:0003254"}


id: PBO:0076082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striatin","termid":"PBO:0076082"}


id: PBO:0081590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF516 divergent transcript","termid":"PBO:0081590"}


id: FYPO:0001935
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of proton-transporting ATP synthase activity by a rotational mechanism is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"},{"relation_name":"is_a","term_name":"abnormal transmembrane transporter activity","termid":"FYPO:0002116"},{"relation_name":"is_a","term_name":"abnormal proton transport","termid":"FYPO:0005971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000138","FYPO:0000707","FYPO:0005447","FYPO:0000654","FYPO:0001985","FYPO:0000002","FYPO:0002114","FYPO:0000661"],"is_obsolete":false,"name":"abnormal proton-transporting ATP synthase activity, rotational mechanism","synonyms":[{"name":"abnormal hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"abnormal mitochondrial proton-transporting ATP synthase activity","type":"narrow"},{"name":"abnormal proton-transporting ATP synthase activity","type":"related"}],"termid":"FYPO:0001935"}


id: MONDO:0859200
data:
  {"annotated_genes":["SJAG_04153"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85738],"is_not":false,"summary":null,"term":"MONDO:0859200"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04153":null},"genotype_count":0,"is_obsolete":false,"name":"cerebellar ataxia, brain abnormalities, and cardiac conduction defects","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1794215","OMIM:619576","Orphanet:641361","UMLS:C5562005"],"synonyms":[{"name":"neurodevelopmental delay-hypotonia-cerebellar ataxia-cardiac conduction defects syndrome","type":"exact"}],"termid":"MONDO:0859200","terms_by_termid":{"MONDO:0859200":null},"xrefs":{"Monarch":{"xref_id":"0859200"}}}


id: PATO:0001405
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A nucleate quality inhering in a bearer by virtue of the bearer's having no nucleus.","definition_xrefs":["Biology-online:Biology-online"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleate quality","termid":"PATO:0001404"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anucleate","termid":"PATO:0001405"}


id: GO:0050839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cell adhesion molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cell adhesion molecule binding","synonyms":[{"name":"CAM binding","type":"exact"},{"name":"adhesive extracellular matrix constituent","type":"related"},{"name":"cell adhesion molecule activity","type":"related"},{"name":"cell adhesion receptor activity","type":"related"}],"termid":"GO:0050839"}


id: GO:0047049
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-2-hydroxystearate + NAD+ = 2-oxostearate + H+ + NADH.","definition_xrefs":["RHEA:15949","EC:1.1.1.98"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(R)-2-hydroxy-fatty acid dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.98-RXN","KEGG_REACTION:R03021"],"synonyms":[{"name":"(R)-2-hydroxy-fatty-acid dehydrogenase activity","type":"exact"},{"name":"(R)-2-hydroxystearate:NAD+ oxidoreductase activity","type":"related"},{"name":"2-hydroxy fatty acid oxidase","type":"broad"},{"name":"D-2-hydroxy fatty acid dehydrogenase activity","type":"related"}],"termid":"GO:0047049"}


id: PBO:0091910
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD Finger protein","termid":"PBO:0091910"}


id: PBO:0090028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex, metallo-beta-lactamase/beta-CASP protein Cft2","termid":"PBO:0090028"}


id: GO:0004043
data:
  {"annotated_genes":["SJAG_00869"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100702],"is_not":false,"summary":null,"term":"GO:0004043"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-2-aminoadipate 6-semialdehyde + NADP+ + H2O = L-2-aminoadipate + NADPH + H+.","definition_xrefs":["EC:1.2.1.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00869":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-aminoadipate-semialdehyde dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-70941","RHEA:12308","MetaCyc:1.2.1.31-RXN"],"synonyms":[{"name":"2-aminoadipate semialdehyde dehydrogenase activity","type":"related"},{"name":"2-aminoadipic semialdehyde dehydrogenase activity","type":"related"},{"name":"AAR","type":"related"},{"name":"L-2-aminoadipate-6-semialdehyde:NAD(P)+ 6-oxidoreductase","type":"related"},{"name":"L-alpha-aminoadipate delta-semialdehyde oxidoreductase activity","type":"related"},{"name":"L-alpha-aminoadipate delta-semialdehyde:NAD oxidoreductase activity","type":"related"},{"name":"L-alpha-aminoadipate delta-semialdehyde:nicotinamide adenine dinucleotide oxidoreductase activity","type":"related"},{"name":"alpha-aminoadipate reductase activity","type":"related"},{"name":"alpha-aminoadipate-semialdehyde dehydrogenase activity","type":"related"},{"name":"aminoadipate semialdehyde dehydrogenase activity","type":"related"},{"name":"aminoadipate-semialdehyde dehydrogenase activity","type":"related"}],"termid":"GO:0004043","terms_by_termid":{"GO:0004043":null}}


id: PBO:0065749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrin domain containing 1","termid":"PBO:0065749"}


id: GO:1900334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of methane biosynthetic process from 3-(methylthio)propionic acid.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fatty acid metabolic process","termid":"GO:0045922"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from 3-(methylthio)propionic acid","termid":"GO:1900333"},{"relation_name":"is_a","term_name":"negative regulation of alkane biosynthetic process","termid":"GO:1901578"},{"relation_name":"is_a","term_name":"negative regulation of cellular respiration","termid":"GO:1901856"},{"relation_name":"negatively_regulates","term_name":"methane biosynthetic process from 3-(methylthio)propionic acid","termid":"GO:2001132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006091","GO:0006629","GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"negative regulation of methane biosynthetic process from 3-(methylthio)propionic acid","synonyms":[{"name":"down regulation of methane biosynthetic process from 3-(methylthio)propionic acid","type":"exact"},{"name":"down-regulation of methane biosynthetic process from 3-(methylthio)propionic acid","type":"exact"},{"name":"downregulation of methane biosynthetic process from 3-(methylthio)propionic acid","type":"exact"},{"name":"inhibition of methane biosynthetic process from 3-(methylthio)propionic acid","type":"narrow"}],"termid":"GO:1900334"}


id: PBO:0083289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; null mutant exhibits synthetic phenotype with alpha-synuclein","termid":"PBO:0083289"}


id: GO:0033420
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CUG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"CUG codon-amino acid adaptor activity","synonyms":[{"name":"CTG codon-amino acid adaptor activity","type":"exact"},{"name":"leucine tRNA","type":"related"}],"termid":"GO:0033420"}


id: PBO:0050152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 8","termid":"PBO:0050152"}


id: MONDO:0013648
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial progressive hyperpigmentation is a rare, genetic, skin pigmentation anomaly disorder characterized by irregular patches of hyperpigmented skin which present at birth or in early infancy and increase in size, number and confluence with age. Affected areas of the body include the face, neck, trunk and limbs, as well as the palms, soles, oral mucosa and conjuctiva. No hypogmentation macules are observed and no systemic diseases are associated.","definition_xrefs":["Orphanet:79146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"familial progressive hyperpigmentation","secondary_identifiers":["SCTID:715630006","icd11.foundation:1808730427","OMIM:614233","GARD:16706"],"synonyms":[{"name":"FPH1","type":"related"},{"name":"Fph","type":"related"},{"name":"hyperpigmentation, familial progressive, 1","type":"related"},{"name":"melanosis diffusa congenita","type":"exact"},{"name":"melanosis universalis hereditaria","type":"exact"},{"name":"universal melanosis","type":"exact"}],"termid":"MONDO:0013648","xrefs":{"Monarch":{"xref_id":"0013648"}}}


id: GO:0140298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Uptake of iron into a cell via binding to an extracellular receptor, which is internalized by endocytosis.","definition_xrefs":["PMID:23092063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor-mediated endocytosis","termid":"GO:0006898"},{"relation_name":"is_a","term_name":"iron import into cell","termid":"GO:0033212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0098771","GO:0008150","GO:0016192","GO:0051179"],"is_obsolete":false,"name":"endocytic iron import into cell","synonyms":[{"name":"iron import into cell by endocytosis","type":"exact"}],"termid":"GO:0140298"}


id: GO:0102195
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate + D-lysinium(1+) + ATP = UDP-N-acetylmuramoyl-L-alanyl-gamma-D-glutamyl-D-lysine + ADP + hydrogenphosphate + H+.","definition_xrefs":["EC:6.3.2.37","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--D-lysine ligase activity","secondary_identifiers":["RHEA:25273","MetaCyc:RXN-12042"],"termid":"GO:0102195"}


id: PBO:0082797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the yeast dynactin complex; consisting of Nip100p, Jnm1p, and Arp1p; required for proper nuclear migration and spindle partitioning during mitotic anaphase B","termid":"PBO:0082797"}


id: MONDO:0011550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibromatosis, gingival, with hypertrichosis and intellectual disability","secondary_identifiers":["MESH:C565331","MEDGEN:344255","OMIM:605400","UMLS:C1854306"],"synonyms":[{"name":"fibromatosis, gingival, with hypertrichosis and intellectual disability","type":"exact"},{"name":"fibromatosis, gingival, with hypertrichosis and mental retardation","type":"exact"}],"termid":"MONDO:0011550","xrefs":{"Monarch":{"xref_id":"0011550"}}}


id: PBO:0026970
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_plasma_membrane_sterol_distribution","termid":"PBO:0026970"}


id: PBO:0061243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP58 ribonucleoprotein","termid":"PBO:0061243"}


id: PBO:0054417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1813","termid":"PBO:0054417"}


id: PBO:0042673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule pseudogene 7","termid":"PBO:0042673"}


id: MONDO:0019321
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A heterogeneous group of cases that are clinically diagnosed as Werner syndrome (WS) but do not carry WRN gene mutations. Similar to classical WS caused by WRN mutations, patients generally exhibit an aged appearance and common age-related disorders at earlier ages compared to the general population.","definition_xrefs":["Orphanet:79474"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"progeroid syndrome","termid":"MONDO:0015333"},{"relation_name":"is_a","term_name":"laminopathy","termid":"MONDO:0021106"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical Werner syndrome","secondary_identifiers":["SCTID:715633008","icd11.foundation:1661142154","UMLS:C4275075","GARD:11910","MEDGEN:894770"],"synonyms":[{"name":"atypical progeroid syndrome","type":"exact"}],"termid":"MONDO:0019321","xrefs":{"Monarch":{"xref_id":"0019321"}}}


id: MONDO:0012113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"idiopathic generalized epilepsy","termid":"MONDO:0005579"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, idiopathic generalized, susceptibility to, 3","secondary_identifiers":["MEDGEN:373335","OMIM:608762","DOID:0111318","UMLS:C1837468"],"synonyms":[{"name":"EIG3","type":"exact"},{"name":"epilepsy, idiopathic generalized, susceptibility to, 3","type":"exact"},{"name":"epilepsy, idiopathic generalized, susceptibility to, locus on chromosome 9","type":"exact"}],"termid":"MONDO:0012113","xrefs":{"Monarch":{"xref_id":"0012113"}}}


id: PBO:0088398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin Snx3","termid":"PBO:0088398"}


id: PBO:0074292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STE20 like kinase","termid":"PBO:0074292"}


id: GO:0042702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of the endometrium and blood vessels in the uterus following menstruation, resulting from a rise in progesterone levels.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"luteinization","termid":"GO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uterine wall growth","termid":"GO:0042702"}


id: GO:0097134
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin E1 and cyclin-dependent kinase 2 (CDK2). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:15935619","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cyclin E1-CDK2 complex","termid":"GO:0097134"}


id: PR:O94485
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC417.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C417.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC417.04","synonyms":[{"name":"Spom972h-SPCC417.04","type":"exact"}],"termid":"PR:O94485"}


id: PBO:0069895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1186, pseudogene","termid":"PBO:0069895"}


id: GO:0015448
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete type III protein (virulence-related) secretor activity (obsolete GO:0015448)","synonyms":[{"name":"type III protein (virulence-related) secretor activity","type":"exact"}],"termid":"GO:0015448"}


id: PBO:0000204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase Sty1","termid":"PBO:0000204"}


id: GO:0036285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a SAGA complex, a SAGA-type histone acetyltransferase complex that contains Spt8 (in budding yeast) or a homolog thereof.","definition_xrefs":["GOC:mah","PMID:22456315","PMID:10637607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"SAGA complex assembly","synonyms":[{"name":"SAGA complex formation","type":"exact"}],"termid":"GO:0036285"}


id: PBO:0086600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression is increased greatly during sporulation; YEL023C is not an essential gene","termid":"PBO:0086600"}


id: PBO:0053505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 488","termid":"PBO:0053505"}


id: GO:0046186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of acetaldehyde, a colorless, flammable liquid intermediate in the metabolism of alcohol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetaldehyde metabolic process","termid":"GO:0006117"},{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acetaldehyde biosynthetic process","synonyms":[{"name":"acetaldehyde anabolism","type":"exact"},{"name":"acetaldehyde biosynthesis","type":"exact"},{"name":"acetaldehyde formation","type":"exact"},{"name":"acetaldehyde synthesis","type":"exact"}],"termid":"GO:0046186"}


id: PBO:0062004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily H member 4 pseudogene","termid":"PBO:0062004"}


id: PBO:0091281
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HydroxyUrea Sensitive","termid":"PBO:0091281"}


id: PATO:0001075
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001075 absolute momentum (obsolete PATO:0001075)","termid":"PATO:0001075"}


id: PBO:0003609
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.3.1.1","termid":"PBO:0003609"}


id: GO:0036389
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex that forms at the bacterial oriC during the initial step of DNA replication and allows the origin to become competent, or 'licensed', for replication.","definition_xrefs":["GOC:jh2","GOC:bhm","PMID:19833870","Wikipedia:Pre-replication_complex","PMID:21035377","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-replicative complex","termid":"GO:0036387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"bacterial pre-replicative complex","synonyms":[{"name":"bacterial pre-RC","type":"exact"}],"termid":"GO:0036389"}


id: MONDO:0002034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extranodal lymphoma that arises from the cecum. The majority are B-cell non-Hodgkin lymphomas.","definition_xrefs":["NCIT:C5515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cecum cancer","termid":"MONDO:0002033"},{"relation_name":"is_a","term_name":"colon lymphoma","termid":"MONDO:0002035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"cecum lymphoma","secondary_identifiers":["MEDGEN:232035","UMLS:C1332867","DOID:1522"],"synonyms":[{"name":"caecum lymphoma","type":"exact"},{"name":"cecal lymphoma","type":"exact"},{"name":"cecum lymphoma","type":"exact"},{"name":"lymphoma of caecum","type":"exact"},{"name":"lymphoma of cecum","type":"exact"},{"name":"lymphoma of the cecum","type":"exact"},{"name":"primary cecum lymphoma","type":"exact"}],"termid":"MONDO:0002034","xrefs":{"Monarch":{"xref_id":"0002034"}}}


id: PBO:0070959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 14","termid":"PBO:0070959"}


id: GO:0048179
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that acts as an activin receptor. Heterodimeric activin receptors, comprising one Type I activin receptor and one Type II receptor polypeptide, and heterotrimeric receptors have been observed.","definition_xrefs":["PMID:8307945","PMID:8622651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"},{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"activin receptor complex","termid":"GO:0048179"}


id: MONDO:0018749
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary persistence of fetal hemoglobin (HPFH) associated with beta-thalassemia is characterized by high hemoglobin (Hb) F levels and an increased number of fetal-Hb-containing-cells.","definition_xrefs":["Orphanet:46532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-thalassemia and related diseases","termid":"MONDO:0017145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"hereditary persistence of fetal hemoglobin-beta-thalassemia syndrome","secondary_identifiers":["GARD:18642","HGNC:5153","MEDGEN:543715","icd11.foundation:418601307","UMLS:C0271994","HGNC:3627"],"synonyms":[{"name":"HPFH-beta-thalassemia syndrome","type":"exact"}],"termid":"MONDO:0018749","xrefs":{"Monarch":{"xref_id":"0018749"}}}


id: PBO:0057207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 376a-2","termid":"PBO:0057207"}


id: PBO:0085242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-prolyl cis-trans isomerase (cyclophilin); catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; potential role in the secretory pathway; CPR8 has a paralog, CPR4, that arose from the whole genome duplication","termid":"PBO:0085242"}


id: PBO:0069364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 624, pseudogene","termid":"PBO:0069364"}


id: MONDO:0009174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pathological conditions in the intestines that are characterized by the gastrointestinal loss of serum proteins, including serum albumin; immunoglobulins; and at times lymphocytes. Severe condition can result in hypogammaglobulinemia or lymphopenia. Protein-losing enteropathies are associated with a number of diseases including intestinal lymphangiectasis; whipple'S disease; and neoplasms of the small intestine.","definition_xrefs":["MESH:D011504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"protein-losing enteropathy","secondary_identifiers":["icd11.foundation:1821383469","Orphanet:566175","DOID:10611","SCTID:22542007","ICD9:579.8","MEDGEN:19522","OMIM:226300","UMLS:C0033680","GARD:15003","HP:0002243"],"synonyms":[{"name":"CHAPLE","type":"related"},{"name":"complement hyperactivation, ANGIOPATHIC thrombosis, and PROTEIN-losing enteropathy","type":"related"},{"name":"complement hyperactivation, Angiopathic thrombosis, and Protein-losing enteropathy","type":"related"},{"name":"enteropathy, PROTEIN-losing","type":"related"},{"name":"enteropathy, exudative","type":"exact"},{"name":"exudative enteropathy","type":"exact"},{"name":"protein-losing enteropathy","type":"exact"},{"name":"protein-losing enteropathy (disease)","type":"exact"}],"termid":"MONDO:0009174","xrefs":{"Monarch":{"xref_id":"0009174"}}}


id: MONDO:0020030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic renal disease (obsolete MONDO:0020030)","secondary_identifiers":["Orphanet:98056"],"termid":"MONDO:0020030","xrefs":{"Monarch":{"xref_id":"0020030"}}}


id: null:local:computer file
data:
  {"annotation_feature_type":"gene","cv_name":"null","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"computer file","termid":"null:local:computer file"}


id: GO:0051071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the pyruvylated galactose residue 4-6-O-[(R)(1-carboxyethylidine)]-Gal-beta-1,3-. The galactose residue is part of a larger polysaccharide chain.","definition_xrefs":["GOC:ai","PMID:15173185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"4,6-pyruvylated galactose residue metabolic process","synonyms":[{"name":"4,6-pyruvylated galactose residue metabolism","type":"exact"},{"name":"4-6-O-[(R)(1-carboxyethylidine)]-Gal-beta-1,3 metabolic process","type":"exact"},{"name":"4-6-O-[(R)(1-carboxyethylidine)]-Gal-beta-1,3 metabolism","type":"exact"},{"name":"PvGal metabolic process","type":"exact"},{"name":"PvGal metabolism","type":"exact"}],"termid":"GO:0051071"}


id: MONDO:0018726
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immunodeficiency due to a complement cascade component deficiency (obsolete MONDO:0018726)","termid":"MONDO:0018726","xrefs":{"Monarch":{"xref_id":"0018726"}}}


id: PBO:0086798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YBR219C is not an essential gene","termid":"PBO:0086798"}


id: PR:000027596
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.3 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PMID:20929775","PMID:11242054","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal histone H3.3","termid":"PR:000027595"},{"relation_name":"is_a","term_name":"core histone (Schizosaccharomyces pombe)","termid":"PR:000041293"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"Spom-hht3","type":"exact"}],"termid":"PR:000027596"}


id: MONDO:0005035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroblastic tumor characterized by the presence of neuroblastic cells, ganglion cells, and a stroma with Schwannian differentiation constituting more than fifty-percent of the tumor volume. There are two histologic subtypes identified: ganglioneuroblastoma, intermixed and ganglioneuroblastoma, nodular.","definition_xrefs":["NCIT:C3790"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"neuroblastoma","termid":"MONDO:0005072"},{"relation_name":"is_a","term_name":"neuroblastic tumor","termid":"MONDO:0006316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ganglioneuroblastoma","secondary_identifiers":["Orphanet:251877","HP:0006747","NIFSTD:birnlex_12633","MedDRA:10017708","GARD:20719","ICDO:9490/3","ONCOTREE:GNBL","DOID:4163","ICD9:171.9","EFO:0000502","MEDGEN:60218","MESH:D018305","UMLS:C0206718","SCTID:116381000119105","NANDO:2200041"],"synonyms":[{"name":"ganglioneuroblastoma","type":"exact"},{"name":"ganglioneuroblastoma (disease)","type":"exact"},{"name":"ganglioneuroblastoma (morphologic abnormality)","type":"exact"},{"name":"ganglioneuroblastoma, malignant","type":"exact"}],"termid":"MONDO:0005035","xrefs":{"Monarch":{"xref_id":"0005035"}}}


id: MONDO:0700194
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lymphoma that occurs in a chicken.","definition_xrefs":["NCIT:C135004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma, non-human animal","termid":"MONDO:0700102"},{"relation_name":"is_a","term_name":"chicken neoplasm","termid":"MONDO:0700189"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chicken lymphoma","termid":"MONDO:0700194","xrefs":{"Monarch":{"xref_id":"0700194"}}}


id: GO:0006631
data:
  {"annotated_genes":["SJAG_01356","SJAG_04972","SJAG_03198","SJAG_02769","SJAG_00902","SJAG_03526","SJAG_00221","SJAG_00947","SJAG_04107","SJAG_00706","SJAG_03313","SJAG_00734","SJAG_03471","SJAG_01402","SJAG_04570","SJAG_03943","SJAG_01396","SJAG_03180","SJAG_01238","SJAG_02763","SJAG_03130","SJAG_00305","SJAG_02717","SJAG_01300","SJAG_04913","SJAG_01458","SJAG_02007","SJAG_03909","SJAG_02885","SJAG_03972","SJAG_00099","SJAG_00102","SJAG_01946","SJAG_03553","SJAG_00630"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91289,92997,100720,101140,108200,115259],"is_not":false,"summary":null,"term":"GO:0006631"},{"annotations":[111323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001561"},{"annotations":[90925,94493,101553,100237,111993,97856,97174,96807,97763,87592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006633"},{"annotations":[90943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009062"},{"annotations":[97699,105375,110812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030497"},{"annotations":[91427,88982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034625"},{"annotations":[91428,88983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019367"},{"annotations":[112180,96656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009107"},{"annotations":[97175,100238,103824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042759"},{"annotations":[113255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042758"},{"annotations":[112914,105087,107852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001676"},{"annotations":[110753],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045717"},{"annotations":[97177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900535"},{"annotations":[98532],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010510"},{"annotations":[113896,69777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006636"},{"annotations":[102973,88985,91431,105377,110813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042761"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid metabolic process","termid":"GO:0006629"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00099":null,"SJAG_00102":null,"SJAG_00221":null,"SJAG_00305":null,"SJAG_00630":null,"SJAG_00706":null,"SJAG_00734":null,"SJAG_00902":null,"SJAG_00947":null,"SJAG_01238":null,"SJAG_01300":null,"SJAG_01356":null,"SJAG_01396":null,"SJAG_01402":null,"SJAG_01458":null,"SJAG_01946":null,"SJAG_02007":null,"SJAG_02717":null,"SJAG_02763":null,"SJAG_02769":null,"SJAG_02885":null,"SJAG_03130":null,"SJAG_03180":null,"SJAG_03198":null,"SJAG_03313":null,"SJAG_03471":null,"SJAG_03526":null,"SJAG_03553":null,"SJAG_03909":null,"SJAG_03943":null,"SJAG_03972":null,"SJAG_04107":null,"SJAG_04570":null,"SJAG_04913":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"fatty acid metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Fatty_acid_metabolism","Reactome:R-HSA-8978868","Reactome:R-HSA-211935","Reactome:R-HSA-434313"],"synonyms":[{"name":"fatty acid metabolism","type":"exact"}],"termid":"GO:0006631","terms_by_termid":{"GO:0001561":null,"GO:0001676":null,"GO:0006631":null,"GO:0006633":null,"GO:0006636":null,"GO:0009062":null,"GO:0009107":null,"GO:0010510":null,"GO:0019367":null,"GO:0030497":null,"GO:0034625":null,"GO:0042758":null,"GO:0042759":null,"GO:0042761":null,"GO:0045717":null,"GO:1900535":null}}


id: GO:0042856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of eugenol, a colorless, aromatic, liquid hydrocarbon (C10H12O2) found in clove oil.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"eugenol metabolic process","termid":"GO:0042854"},{"relation_name":"is_a","term_name":"phenylpropanoid catabolic process","termid":"GO:0046271"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"eugenol catabolic process","synonyms":[{"name":"4-allyl-2-methoxyphenol catabolic process","type":"exact"},{"name":"4-allyl-2-methoxyphenol catabolism","type":"exact"},{"name":"eugenic acid catabolic process","type":"exact"},{"name":"eugenic acid catabolism","type":"exact"},{"name":"eugenol breakdown","type":"exact"},{"name":"eugenol catabolism","type":"exact"},{"name":"eugenol degradation","type":"exact"}],"termid":"GO:0042856"}


id: PBO:0059526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded 12S rRNA","termid":"PBO:0059526"}


id: PATO:0000169
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An organismal quality inhering in a bearer or a population by virtue of the bearer's disposition to survive and develop normally or the number of surviving individuals in a given population.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organismal quality","termid":"PATO:0001995"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"viability","termid":"PATO:0000169"}


id: GO:0050193
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-xylulose 5-phosphate + phosphate = acetyl phosphate + D-glyceraldehyde 3-phosphate + H2O.","definition_xrefs":["EC:4.1.2.9","MetaCyc:PHOSPHOKETOLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"phosphoketolase activity","secondary_identifiers":["RHEA:10468"],"synonyms":[{"name":"D-xylulose-5-phosphate D-glyceraldehyde-3-phosphate-lyase (adding phosphate; acetyl-phosphate-forming)","type":"related"},{"name":"D-xylulose-5-phosphate D-glyceraldehyde-3-phosphate-lyase (phosphate-acetylating) activity","type":"related"},{"name":"xylulose-5-phosphate phosphoketolase activity","type":"related"}],"termid":"GO:0050193"}


id: SO:0002265
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"LTR retrotransposons in the Gypsy superfamily contain elements coding for specific proteins in this order: GAG, AP, RT, RH, INT. GAG is a structural protein for virus-like particles. AP is aspartic proteinase. INT is a DDE integrase. RT is a reverse transcriptase. RH is RNAse H.","definition_xrefs":["PMID:17984973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gypsy_LTR_retrotransposon","synonyms":[{"name":"Gypsy LTR retrotransposon","type":"exact"},{"name":"RLG retrotransposon","type":"exact"},{"name":"Ty3 retrotransposon","type":"exact"}],"termid":"SO:0002265"}


id: GO:0032560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a guanyl deoxyribonucleotide, any compound consisting of guanosine esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the deoxyribose moiety.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanyl nucleotide binding","termid":"GO:0019001"},{"relation_name":"is_a","term_name":"purine deoxyribonucleotide binding","termid":"GO:0032554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"guanyl deoxyribonucleotide binding","termid":"GO:0032560"}


id: PBO:0085899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may be involved in chitin biosynthesis by regulation of Chs3p export from the ER; relocalizes from bud neck to ER upon DNA replication stress","termid":"PBO:0085899"}


id: MONDO:0011987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cone-rod dystrophy in which the cause of the disease is a mutation in the RPGRIP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cone-rod dystrophy 13","secondary_identifiers":["MEDGEN:413025","MESH:C567698","OMIM:608194","UMLS:C2750720","DOID:0111016","GARD:15426"],"synonyms":[{"name":"CORD13","type":"exact"},{"name":"RPGRIP1 cone-rod dystrophy","type":"exact"},{"name":"cone-rod dystrophy 13","type":"exact"},{"name":"cone-rod dystrophy caused by mutation in RPGRIP1","type":"exact"},{"name":"cone-rod dystrophy type 13","type":"exact"}],"termid":"MONDO:0011987","xrefs":{"Monarch":{"xref_id":"0011987"}}}


id: PBO:0076385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming acidic coiled-coil containing protein 2","termid":"PBO:0076385"}


id: SO:0002143
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A histone 2B modification where the modification is the acetylation of the residue.","definition_xrefs":["ISBN:0815341059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_acetylation_site","termid":"SO:0001702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"histone_2B_acetylation_site","synonyms":[{"name":"H2Bac","type":"exact"},{"name":"histone 2B acetylation site","type":"exact"}],"termid":"SO:0002143"}


id: PBO:0091144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial mini protein, single membrane pass Min8, meiosis specific splicing in fission yeast","termid":"PBO:0091144"}


id: MONDO:0011796
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, partial, with pericentral spikes","secondary_identifiers":["OMIM:607221","UMLS:C1846609","MEDGEN:337614","MESH:C564605"],"synonyms":[{"name":"Epps","type":"related"},{"name":"PEPS","type":"exact"},{"name":"epilepsy, partial, with pericentral spikes","type":"exact"}],"termid":"MONDO:0011796","xrefs":{"Monarch":{"xref_id":"0011796"}}}


id: SO:0000070
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a gene when it is located within the intron of another gene and on the opposite strand.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inside_intron","termid":"SO:0000069"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inside_intron_antiparallel","synonyms":[{"name":"inside intron antiparallel","type":"exact"}],"termid":"SO:0000070"}


id: PBO:0084071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase required for ribosomal subunit synthesis and rRNA processing; required for synthesis of 40S ribosomal subunits and for processing the 35S pre-rRNA at sites A0, A1, and A2; interacts with Rcl1p, which stimulates its GTPase and U3 snoRNA binding activities; has similarity to Tsr1p","termid":"PBO:0084071"}


id: MONDO:0020035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare otorhinolaryngologic tumor (obsolete MONDO:0020035)","secondary_identifiers":["Orphanet:98061"],"synonyms":[{"name":"rare ORL cancer","type":"exact"},{"name":"rare ORL neoplasm","type":"exact"},{"name":"rare ORL tumor","type":"exact"}],"termid":"MONDO:0020035","xrefs":{"Monarch":{"xref_id":"0020035"}}}


id: PBO:0087531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of nuclear RNase P; nuclear RNase P cleaves tRNA precursors to generate mature 5' ends and facilitates turnover of nuclear RNAs; not shared between RNase MRP and RNase P, in contrast to all other RNase P protein subunits; protein abundance increases in response to DNA replication stress","termid":"PBO:0087531"}


id: PBO:0054924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2338","termid":"PBO:0054924"}


id: MONDO:0020339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete X-linked complex spastic paraplegia (obsolete MONDO:0020339)","secondary_identifiers":["Orphanet:98888"],"synonyms":[{"name":"Complex X-linked HSP","type":"exact"},{"name":"Complex X-linked SPG","type":"exact"},{"name":"X-linked complicated spastic paraplegia","type":"exact"},{"name":"complicated X-linked HSP","type":"exact"},{"name":"complicated X-linked SPG","type":"exact"}],"termid":"MONDO:0020339","xrefs":{"Monarch":{"xref_id":"0020339"}}}


id: PATO:0001804
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A texture quality inhering in a bearer by virtue of the bearer's being covered or partially covered with scales.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"texture","termid":"PATO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scaly","synonyms":[{"name":"squamous","type":"related"}],"termid":"PATO:0001804"}


id: PBO:0029434
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_curved_septated_vegetative_cell","termid":"PBO:0029434"}


id: PBO:0074806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 13 pseudogene 1","termid":"PBO:0074806"}


id: GO:0060391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of SMAD protein signal transduction.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of SMAD protein signal transduction","termid":"GO:0060390"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090100"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"SMAD protein signal transduction","termid":"GO:0060395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of SMAD protein signal transduction","synonyms":[{"name":"positive regulation of SMAD protein import into nucleus","type":"narrow"},{"name":"positive regulation of SMAD protein nuclear translocation","type":"narrow"}],"termid":"GO:0060391"}


id: GO:0010491
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-L-arabinose 1-phosphate + UTP = UDP-L-arabinose + diphosphate.","definition_xrefs":["PMID:17341835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTP-monosaccharide-1-phosphate uridylyltransferase activity","termid":"GO:0051748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003674","GO:0016779","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"UTP:arabinose-1-phosphate uridylyltransferase activity","termid":"GO:0010491"}


id: MONDO:0020351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blake pouch cyst is a non-syndromic, usually benign, cystic malformation of the posterior fossa characterized by a midline outpouching of the superior medullary velum into the cisterna magna that results from failure of the rudimental fourth ventricular tela choroidea to regress during embryogenesis. Patients can be asymptomatic or present in childhood or adulthood with clinical manifestations of hydrocephalus, such as headache, hypotonia, vertigo, syncope, vomiting, blurred or double vision, nystagmus, papilledema, and delayed gait development.","definition_xrefs":["Orphanet:98922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystic malformation of the posterior fossa","termid":"MONDO:0020134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"Blake pouch cyst","secondary_identifiers":["GARD:19603","UMLS:C3662124","MEDGEN:783279"],"termid":"MONDO:0020351","xrefs":{"Monarch":{"xref_id":"0020351"}}}


id: FYPO:0005336
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of histone H3 measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular histone level","termid":"FYPO:0004981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal level of histone H3 in cell","synonyms":[{"name":"normal accumulation of histone H3 in cell","type":"related"},{"name":"normal cellular histone H3 level","type":"exact"},{"name":"normal histone H3 level during vegetative growth","type":"exact"},{"name":"normal level of histone H3 in cell during mitotic cell cycle","type":"related"},{"name":"normal level of histone H3 in cell during vegetative growth","type":"exact"}],"termid":"FYPO:0005336"}


id: GO:0050181
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + phorbol 12,13-dibutanoate = butanoate + H+ + phorbol 13-butanoate.","definition_xrefs":["EC:3.1.1.51","RHEA:21316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"phorbol-diester hydrolase activity","secondary_identifiers":["KEGG_REACTION:R04119","MetaCyc:PHORBOL-DIESTER-HYDROLASE-RXN"],"synonyms":[{"name":"12,13-diacylphorbate 12-acylhydrolase activity","type":"related"},{"name":"PDEH","type":"related"},{"name":"diacylphorbate 12-hydrolase activity","type":"related"},{"name":"phorbol-12,13-diester 12-ester hydrolase activity","type":"related"}],"termid":"GO:0050181"}


id: PBO:0062186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily N member 5","termid":"PBO:0062186"}


id: GO:1902498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein autoubiquitination.","definition_xrefs":["GOC:rb","GOC:TermGenie","PMID:24069405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein ubiquitination","termid":"GO:0031396"},{"relation_name":"regulates","term_name":"protein autoubiquitination","termid":"GO:0051865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"regulation of protein autoubiquitination","synonyms":[{"name":"regulation of protein auto-ubiquitination","type":"exact"},{"name":"regulation of protein auto-ubiquitinylation","type":"exact"},{"name":"regulation of protein autoubiquitinylation","type":"exact"},{"name":"regulation of protein self-ubiquitination","type":"exact"},{"name":"regulation of protein self-ubiquitinylation","type":"exact"}],"termid":"GO:1902498"}


id: GO:0042020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-23 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-23 receptor activity","synonyms":[{"name":"IL-23 receptor activity","type":"exact"},{"name":"IL-23R","type":"exact"}],"termid":"GO:0042020"}


id: PBO:0048293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanidinoacetate N-methyltransferase","termid":"PBO:0048293"}


id: GO:0047124
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3S,5S)-3,5-diaminohexanoate + H2O + NAD+ = (S)-5-amino-3-oxo-hexanoate + H+ + NADH + NH4.","definition_xrefs":["EC:1.4.1.11","RHEA:19633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"L-erythro-3,5-diaminohexanoate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03349","MetaCyc:1.4.1.11-RXN"],"synonyms":[{"name":"L-3,5-diaminohexanoate dehydrogenase activity","type":"related"},{"name":"L-erythro-3,5-diaminohexanoate:NAD+ oxidoreductase (deaminating)","type":"related"}],"termid":"GO:0047124"}


id: PBO:0004040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol-glycerol-3-phosphate3-phosphatidyltransferase(predicted)","termid":"PBO:0004040"}


id: PBO:0007714
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible frameshifted","termid":"PBO:0007714"}


id: GO:0060984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cardiac vascular smooth muscle cell that was derived from the epicardium over time, from its formation to the mature state.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac vascular smooth muscle cell development","termid":"GO:0060948"},{"relation_name":"part_of","term_name":"epicardium-derived cardiac vascular smooth muscle cell differentiation","termid":"GO:0060983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epicardium-derived cardiac vascular smooth muscle cell development","termid":"GO:0060984"}


id: PBO:0046214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 7","termid":"PBO:0046214"}


id: MONDO:0012685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bipolar disorder","termid":"MONDO:0004985"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major affective disorder 5","secondary_identifiers":["MEDGEN:372672","UMLS:C1970944","OMIM:611535","MESH:C567074"],"synonyms":[{"name":"MAFD5","type":"exact"},{"name":"MAJOR affective disorder 5","type":"related"},{"name":"bipolar affective disorder","type":"related"},{"name":"major affective disorder 5","type":"exact"}],"termid":"MONDO:0012685","xrefs":{"Monarch":{"xref_id":"0012685"}}}


id: PR:Q9UTJ2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphomannomutase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01572","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomannomutase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1556.07","secondary_identifiers":["UniProtKB:Q9UTJ2"],"synonyms":[{"name":"PMM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PMM1","type":"exact"}],"termid":"PR:Q9UTJ2"}


id: GO:1900066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ethanol catabolic process.","definition_xrefs":["GOC:TermGenie","PMID:7760841","PMID:10608811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ethanol catabolic process","termid":"GO:1900065"},{"relation_name":"is_a","term_name":"positive regulation of alcohol catabolic process","termid":"GO:1900421"},{"relation_name":"positively_regulates","term_name":"ethanol catabolic process","termid":"GO:0006068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of ethanol catabolic process","synonyms":[{"name":"activation of ethanol breakdown","type":"narrow"},{"name":"activation of ethanol catabolic process","type":"narrow"},{"name":"activation of ethanol catabolism","type":"narrow"},{"name":"activation of ethanol degradation","type":"narrow"},{"name":"positive regulation of ethanol breakdown","type":"exact"},{"name":"positive regulation of ethanol catabolism","type":"exact"},{"name":"positive regulation of ethanol degradation","type":"exact"},{"name":"up regulation of ethanol breakdown","type":"exact"},{"name":"up regulation of ethanol catabolic process","type":"related"},{"name":"up regulation of ethanol catabolism","type":"exact"},{"name":"up regulation of ethanol degradation","type":"exact"},{"name":"up-regulation of ethanol breakdown","type":"exact"},{"name":"up-regulation of ethanol catabolic process","type":"related"},{"name":"up-regulation of ethanol catabolism","type":"exact"},{"name":"up-regulation of ethanol degradation","type":"exact"},{"name":"upregulation of ethanol breakdown","type":"exact"},{"name":"upregulation of ethanol catabolic process","type":"related"},{"name":"upregulation of ethanol catabolism","type":"exact"},{"name":"upregulation of ethanol degradation","type":"exact"}],"termid":"GO:1900066"}


id: PBO:0090462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer beta subunit","termid":"PBO:0090462"}


id: PBO:0084618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Metallothionein; binds copper and mediates resistance to high concentrations of copper and cadmium; locus is variably amplified in different strains, with two copies, CUP1-1 and CUP1-2, in the genomic sequence reference strain S288C; CUP1-2 has a paralog, CUP1-1, that arose from a segmental duplication","termid":"PBO:0084618"}


id: MONDO:0014139
data:
  {"annotated_genes":["SJAG_00183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85519],"is_not":false,"summary":null,"term":"MONDO:0014139"}]},"cv_name":"mondo","definition":"Any Ehlers-Danlos syndrome, spondylodysplastic type in which the cause of the disease is a mutation in the B3GALT6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, spondylodysplastic type","termid":"MONDO:0007526"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"Ehlers-Danlos syndrome, spondylodysplastic type, 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3809210","Orphanet:536467","MEDGEN:815540","OMIM:615349","GARD:15947"],"synonyms":[{"name":"B3GALT6 Ehlers-Danlos syndrome progeroid type","type":"exact"},{"name":"B3GALT6-related spEDS","type":"exact"},{"name":"B3GALT6-related spondylodysplastic EDS","type":"exact"},{"name":"Beta3GalT6-deficient EDS","type":"exact"},{"name":"EDSP2","type":"exact"},{"name":"EDSSPD2","type":"exact"},{"name":"Ehlers-Danlos syndrome progeroid type 2","type":"exact"},{"name":"Ehlers-Danlos syndrome progeroid type caused by mutation in B3GALT6","type":"exact"},{"name":"Ehlers-Danlos syndrome, progeroid type, 2","type":"exact"},{"name":"Ehlers-Danlos syndrome, progeroid type, 2, formerly","type":"related"},{"name":"Ehlers-Danlos syndrome, spondylodysplastic type, 2","type":"exact"},{"name":"spEDS-B3GALT6","type":"exact"}],"termid":"MONDO:0014139","terms_by_termid":{"MONDO:0014139":null},"xrefs":{"Monarch":{"xref_id":"0014139"}}}


id: GO:1904252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of bile acid metabolic process.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid metabolic process","termid":"GO:0045939"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of bile acid metabolic process","termid":"GO:1904251"},{"relation_name":"negatively_regulates","term_name":"bile acid metabolic process","termid":"GO:0008206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"negative regulation of bile acid metabolic process","synonyms":[{"name":"down regulation of bile acid metabolic process","type":"exact"},{"name":"down regulation of bile acid metabolism","type":"exact"},{"name":"down-regulation of bile acid metabolic process","type":"exact"},{"name":"down-regulation of bile acid metabolism","type":"exact"},{"name":"downregulation of bile acid metabolic process","type":"exact"},{"name":"downregulation of bile acid metabolism","type":"exact"},{"name":"inhibition of bile acid metabolic process","type":"narrow"},{"name":"inhibition of bile acid metabolism","type":"narrow"},{"name":"negative regulation of bile acid metabolism","type":"exact"}],"termid":"GO:1904252"}


id: GO:0002026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent of heart contraction, changing the force with which blood is propelled.","definition_xrefs":["GOC:dph","PMID:10358008","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart contraction","termid":"GO:0008016"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of the force of heart contraction","synonyms":[{"name":"cardiac inotropy","type":"exact"},{"name":"heart inotropy","type":"exact"}],"termid":"GO:0002026"}


id: PBO:0075397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SP100 nuclear antigen","termid":"PBO:0075397"}


id: PBO:0031091
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_chromosome_fragmentation_upon_segregation","termid":"PBO:0031091"}


id: MONDO:0000471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the tricuspid valve.","direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve disorder","termid":"MONDO:0002869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"tricuspid valve disorder","secondary_identifiers":["ICD9:397.0","UMLS:C0264882","NCIT:C78649","EFO:0009568","MEDGEN:120507","DOID:0050826","SCTID:20721001"],"synonyms":[{"name":"RH. tricuspid valve disease","type":"narrow"},{"name":"disease of tricuspid valve","type":"exact"},{"name":"disease or disorder of tricuspid valve","type":"exact"},{"name":"disorder of tricuspid valve","type":"exact"},{"name":"rheumatic disease of tricuspid valve","type":"narrow"},{"name":"rheumatic tricuspid valve disease","type":"narrow"},{"name":"tricuspid disease","type":"exact"},{"name":"tricuspid valve disease","type":"exact"},{"name":"tricuspid valve disease or disorder","type":"exact"},{"name":"tricuspid valve disorder","type":"exact"}],"termid":"MONDO:0000471","xrefs":{"Monarch":{"xref_id":"0000471"}}}


id: GO:0140412
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: zinc(out) + HCO3-(out) = zinc(in) + HCO3-(in).","definition_xrefs":["PMID:27166256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion transmembrane transporter activity","termid":"GO:0005385"},{"relation_name":"is_a","term_name":"monoatomic cation:bicarbonate symporter activity","termid":"GO:0140410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"zinc:bicarbonate symporter activity","synonyms":[{"name":"zinc:hydrogencarbonate symporter activity","type":"exact"}],"termid":"GO:0140412"}


id: PBO:0084502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein required for prospore membrane morphogenesis; required for the proper shape of the prospore membrane (PSM) and for spore wall formation; functions cooperatively with SPO71 in PSM elongation; physically interacts with Spo71p; genetically antagonistic to SPO1, similar to SPO71; localizes to the PSM; required for spore wall formation during sporulation; dispensable for both nuclear divisions during meiosis; dysferlin domain-only protein","termid":"PBO:0084502"}


id: GO:1902294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA replication termination that is involved in cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication termination","termid":"GO:0006274"},{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"cell cycle DNA replication","termid":"GO:0044786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006260","GO:0007049"],"is_obsolete":false,"name":"cell cycle DNA replication termination","synonyms":[{"name":"DNA replication termination involved in cell cycle DNA replication","type":"exact"}],"termid":"GO:1902294"}


id: PBO:0050198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 15","termid":"PBO:0050198"}


id: PBO:0036444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dom34-Hbs1 translation release factor complex subunit Hbs1 (predicted)","termid":"PBO:0036444"}


id: PBO:0111534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flocculin-like protein","termid":"PBO:0111534"}


id: PBO:0080426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 10","termid":"PBO:0080426"}


id: PBO:0031862
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cellular_component_organization_phenotype","termid":"PBO:0031862"}


id: PBO:0059573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1X pseudogene 1","termid":"PBO:0059573"}


id: GO:0032208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a recombinational process involved in the maintenance of proper telomeric length.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of telomere maintenance","termid":"GO:0032205"},{"relation_name":"is_a","term_name":"regulation of telomere maintenance via recombination","termid":"GO:0032207"},{"relation_name":"is_a","term_name":"negative regulation of mitotic recombination","termid":"GO:0045950"},{"relation_name":"is_a","term_name":"negative regulation of DNA recombination at telomere","termid":"GO:0048239"},{"relation_name":"negatively_regulates","term_name":"telomere maintenance via recombination","termid":"GO:0000722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0032200"},{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0032200","GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of telomere maintenance via recombination","synonyms":[{"name":"down regulation of telomere maintenance via recombination","type":"exact"},{"name":"down-regulation of telomere maintenance via recombination","type":"exact"},{"name":"downregulation of telomere maintenance via recombination","type":"exact"},{"name":"inhibition of telomere maintenance via recombination","type":"narrow"}],"termid":"GO:0032208"}


id: FYPO:0006042
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic metaphase chromosome recapture is increased.","definition_xrefs":["PMID:27146110","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic metaphase chromosome recapture","termid":"FYPO:0005362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0000641","FYPO:0000337"],"is_obsolete":false,"name":"increased rate of mitotic metaphase chromosome recapture","synonyms":[{"name":"decreased time to mitotic metaphase chromosome recapture","type":"related"},{"name":"increased rate of chromosome recapture during mitosis","type":"exact"},{"name":"increased rate of chromosome recapture during mitotic metaphase","type":"exact"},{"name":"increased rate of kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"increased rate of metaphase chromosome recapture during mitotic cell cycle","type":"related"},{"name":"increased rate of mitotic kinetochore retrieval","type":"exact"},{"name":"increased rate of mitotic metaphase chromosome recapture during vegetative growth","type":"exact"},{"name":"increased rate of mitotic metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"increased rate of mitotic sister kinetochore recapture","type":"exact"}],"termid":"FYPO:0006042"}


id: PBO:0004981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein (predicted), DUF2429 family","termid":"PBO:0004981"}


id: GO:0015939
data:
  {"annotated_genes":["SJAG_05200","SJAG_01139","SJAG_00043","SJAG_03679","SJAG_03632","SJAG_04481"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[88367,98236,112865,102256,98240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015940"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pantothenate, the anion of pantothenic acid, the amide of beta-alanine and pantoic acid. It is a B complex vitamin that is a constituent of coenzyme A and is distributed ubiquitously in foods.","definition_xrefs":["ISBN:0721662544","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"water-soluble vitamin metabolic process","termid":"GO:0006767"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_01139":null,"SJAG_03632":null,"SJAG_03679":null,"SJAG_04481":null,"SJAG_05200":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"pantothenate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006770","Reactome:R-HSA-199220"],"synonyms":[{"name":"pantothenate metabolism","type":"exact"},{"name":"vitamin B5 metabolic process","type":"exact"},{"name":"vitamin B5 metabolism","type":"exact"}],"termid":"GO:0015939","terms_by_termid":{"GO:0015940":null,"GO:1990181":null}}


id: PBO:0055906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 30","termid":"PBO:0055906"}


id: GO:0030141
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell and upon stimulation, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory vesicle","termid":"GO:0099503"},{"relation_name":"part_of","term_name":"endomembrane system","termid":"GO:0012505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"secretory granule","synonyms":[{"name":"secretory vesicle","type":"broad"}],"termid":"GO:0030141"}


id: GO:0047700
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + cellobiose = ADP + 6-phospho-beta-D-glucosyl-(1,4)-D-glucose.","definition_xrefs":["EC:2.7.1.85","MetaCyc:BETA-GLUCOSIDE-KINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"beta-glucoside kinase activity","secondary_identifiers":["RHEA:21944"],"synonyms":[{"name":"ATP:cellobiose 6-phosphotransferase activity","type":"related"},{"name":"b-glucoside kinase activity","type":"exact"},{"name":"beta-D-glucoside kinase (phosphorylating)","type":"related"}],"termid":"GO:0047700"}


id: GO:0010244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the detection of a low fluence blue light stimulus by the blue low-fluence system. Blue light is electromagnetic radiation with a wavelength of between 440 and 500nm. The blue low-fluence system responds to blue light at or below 0.1 micromols/m2. In certain species excitation of the blue low fluence system induces the transcription of a number of nuclear and plastid coded genes.","definition_xrefs":["PMID:10398709","GOC:mtg_far_red"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to blue light","termid":"GO:0009637"},{"relation_name":"is_a","term_name":"response to low light intensity stimulus","termid":"GO:0009645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to low fluence blue light stimulus by blue low-fluence system","synonyms":[{"name":"response to low fluence blue light","type":"broad"},{"name":"response to low fluence blue light by blf system","type":"exact"}],"termid":"GO:0010244"}


id: PBO:0077021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioesterase superfamily member 4","termid":"PBO:0077021"}


id: GO:1904871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to Cajal body.","definition_xrefs":["GOC:TermGenie","PMID:25467444","GOC:BHF","GOC:BHF_telomere","GO_REF:0000058","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization to nucleus","termid":"GO:1900182"},{"relation_name":"is_a","term_name":"regulation of protein localization to Cajal body","termid":"GO:1904869"},{"relation_name":"positively_regulates","term_name":"protein localization to Cajal body","termid":"GO:1904867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to Cajal body","synonyms":[{"name":"activation of protein localisation in Cajal body","type":"narrow"},{"name":"activation of protein localisation to Cajal body","type":"narrow"},{"name":"activation of protein localization in Cajal body","type":"narrow"},{"name":"activation of protein localization to Cajal body","type":"narrow"},{"name":"positive regulation of protein localisation in Cajal body","type":"exact"},{"name":"positive regulation of protein localisation to Cajal body","type":"exact"},{"name":"positive regulation of protein localization in Cajal body","type":"exact"},{"name":"up regulation of protein localisation in Cajal body","type":"exact"},{"name":"up regulation of protein localisation to Cajal body","type":"exact"},{"name":"up regulation of protein localization in Cajal body","type":"exact"},{"name":"up regulation of protein localization to Cajal body","type":"exact"},{"name":"up-regulation of protein localisation in Cajal body","type":"exact"},{"name":"up-regulation of protein localisation to Cajal body","type":"exact"},{"name":"up-regulation of protein localization in Cajal body","type":"exact"},{"name":"up-regulation of protein localization to Cajal body","type":"exact"},{"name":"upregulation of protein localisation in Cajal body","type":"exact"},{"name":"upregulation of protein localisation to Cajal body","type":"exact"},{"name":"upregulation of protein localization in Cajal body","type":"exact"},{"name":"upregulation of protein localization to Cajal body","type":"exact"}],"termid":"GO:1904871"}


id: GO:0070934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An mRNA stabilization process in which one or more RNA-binding proteins associate with a sequence in the open reading frame called the coding region instability determinant (CRD).","definition_xrefs":["GOC:mah","PMID:19029303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA stabilization","termid":"GO:0048255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"CRD-mediated mRNA stabilization","synonyms":[{"name":"coding region determinant-mediated mRNA stabilization","type":"exact"}],"termid":"GO:0070934"}


id: GO:0071028
data:
  {"annotated_genes":["SJAG_02622","SJAG_01431","SJAG_00961","SJAG_02879","SJAG_03984","SJAG_04768","SJAG_03448","SJAG_04025","SJAG_01818","SJAG_00452","SJAG_04500","SJAG_00456","SJAG_03454","SJAG_04084","SJAG_02720","SJAG_04824","SJAG_05243","SJAG_01540","SJAG_00854","SJAG_01521","SJAG_01529","SJAG_01331","SJAG_04153","SJAG_03745","SJAG_01412","SJAG_03179","SJAG_04198","SJAG_04321","SJAG_01867","SJAG_04601","SJAG_04818","SJAG_03883","SJAG_02005","SJAG_00425","SJAG_02275","SJAG_02382","SJAG_02723","SJAG_04006","SJAG_01191"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88559,88923,92555,94443,95402,96021,100535,101582,103904,104753,105955,114940,115381,117798],"is_not":false,"summary":null,"term":"GO:0071028"},{"annotations":[89262],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0120271"},{"annotations":[108727,103803,86972,90350,90274,91347,96218,98595,106945,108746,110792,117611,91730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033621"},{"annotations":[96736,92925,112756,117612,106946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071031"},{"annotations":[115828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071032"},{"annotations":[105799,86973,90275,94485,109280,115045,91850,108747,88314,117613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071030"},{"annotations":[106146],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0120272"}]},"cv_name":"biological_process","definition":"A process that identifies and degrades defective or aberrant mRNAs within the nucleus.","definition_xrefs":["PMID:14718167","GOC:krc","GOC:dgf","PMID:11586364","PMID:12417728","PMID:18644474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear-transcribed mRNA catabolic process","termid":"GO:0000956"},{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00425":null,"SJAG_00452":null,"SJAG_00456":null,"SJAG_00854":null,"SJAG_00961":null,"SJAG_01191":null,"SJAG_01331":null,"SJAG_01412":null,"SJAG_01431":null,"SJAG_01521":null,"SJAG_01529":null,"SJAG_01540":null,"SJAG_01818":null,"SJAG_01867":null,"SJAG_02005":null,"SJAG_02275":null,"SJAG_02382":null,"SJAG_02622":null,"SJAG_02720":null,"SJAG_02723":null,"SJAG_02879":null,"SJAG_03179":null,"SJAG_03448":null,"SJAG_03454":null,"SJAG_03745":null,"SJAG_03883":null,"SJAG_03984":null,"SJAG_04006":null,"SJAG_04025":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04198":null,"SJAG_04321":null,"SJAG_04500":null,"SJAG_04601":null,"SJAG_04768":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_05243":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016071"],"is_obsolete":false,"name":"nuclear mRNA surveillance","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0071033","GO:0071049","GO:0071048"],"synonyms":[{"name":"nuclear aberrant mRNA catabolic process","type":"exact"},{"name":"nuclear mRNA quality control","type":"exact"},{"name":"nuclear retention of pre-mRNA at the site of transcription","type":"narrow"},{"name":"nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription","type":"narrow"},{"name":"nuclear retention of unspliced pre-mRNA at the site of transcription","type":"narrow"}],"termid":"GO:0071028","terms_by_termid":{"GO:0033621":null,"GO:0071028":null,"GO:0071030":null,"GO:0071031":null,"GO:0071032":null,"GO:0120271":null,"GO:0120272":null}}


id: GO:0043114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent to which blood vessels can be pervaded by fluid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular process in circulatory system","termid":"GO:0003018"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"},{"relation_name":"part_of","term_name":"blood circulation","termid":"GO:0008015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular permeability","termid":"GO:0043114"}


id: MONDO:0015466
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cranio-osteoarthropathy (COA) is a form of primary hypertrophic osteoarthropathy characterized by delayed closure of the cranial sutures and fontanels, digital clubbing, arthropathy, and periostosis.","definition_xrefs":["Orphanet:1525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary hypertrophic osteoarthropathy","termid":"MONDO:0016620"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cranio-osteoarthropathy","secondary_identifiers":["GARD:1564","icd11.foundation:225223076","SCTID:720753002","UMLS:C2678439","MEDGEN:394824"],"synonyms":[{"name":"Currarino disease","type":"exact"},{"name":"Currarino idiopathic osteoarthropathy","type":"exact"},{"name":"Reginato-Schiapachasse syndrome","type":"exact"},{"name":"cranio osteoarthropathy","type":"related"}],"termid":"MONDO:0015466","xrefs":{"Monarch":{"xref_id":"0015466"}}}


id: GO:0004973
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete N-methyl-D-aspartate receptor-associated protein activity (obsolete GO:0004973)","synonyms":[{"name":"N-methyl-D-aspartate receptor-associated protein activity","type":"exact"}],"termid":"GO:0004973"}


id: PBO:0058105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4320","termid":"PBO:0058105"}


id: MONDO:0850230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An urticaria that is characterized by the presence of urticaria for a period exceeding 6 weeks, assuming symptoms for most days of the week.","definition_xrefs":["DOID:0080747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urticaria","termid":"MONDO:0005492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"chronic urticaria","secondary_identifiers":["UMLS:C0263338","MEDGEN:537829","icd11.foundation:901000137"],"termid":"MONDO:0850230","xrefs":{"Monarch":{"xref_id":"0850230"}}}


id: PBO:0069272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 528, pseudogene","termid":"PBO:0069272"}


id: GO:0031139
data:
  {"annotated_genes":["SJAG_00990","SJAG_00256","SJAG_00117","SJAG_04312","SJAG_02785","SJAG_06638","SJAG_00993","SJAG_03309","SJAG_02066","SJAG_05153","SJAG_04682","SJAG_04206","SJAG_04813","SJAG_02723","SJAG_03623","SJAG_03735","SJAG_01794","SJAG_01978","SJAG_01718","SJAG_01254","SJAG_00210","SJAG_02380","SJAG_01509","SJAG_00664","SJAG_02773","SJAG_00472","SJAG_02266","SJAG_02233","SJAG_02444","SJAG_01699","SJAG_03081","SJAG_03453","SJAG_03067","SJAG_01311","SJAG_04009","SJAG_03501","SJAG_02923","SJAG_02379","SJAG_03346","SJAG_01113","SJAG_00526","SJAG_00781","SJAG_05000","SJAG_00600","SJAG_02592","SJAG_01084","SJAG_00975","SJAG_03486","SJAG_01345","SJAG_04026","SJAG_03802","SJAG_02730","SJAG_03340","SJAG_02472","SJAG_00514","SJAG_04509"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87617,90328,98055,98945,99620,101255,104404,106627,110864,115773],"is_not":false,"summary":null,"term":"GO:0031139"},{"annotations":[97919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031141"},{"annotations":[115082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031142"},{"annotations":[108292,115083,99001,87503,115980,115640,88688,117725,105766,106539,118581,118582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010514"},{"annotations":[100036,92406,104002,106140,101347,105303,90893,93854,93714,105397,105985,106334,113966,115568,87680,115028,108501],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010515"},{"annotations":[92805],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0090029"},{"annotations":[88710,92806,95865,105769,91672,96534],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071507"},{"annotations":[87616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000750"},{"annotations":[87325,100884,103946,99993,102865,99002,106541,108063,108293,115774,118585,118586],"is_not":false,"rel_names":["is_a","positively_regulates","regulates"],"summary":null,"term":"GO:1900237"},{"annotations":[89344,92959,110856,90329,87370],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902917"},{"annotations":[90334,110857,115085,105869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032005"}]},"cv_name":"biological_process","definition":"Any process that increases the rate or frequency of conjugation with cellular fusion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of conjugation with cellular fusion","termid":"GO:0031137"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"conjugation with cellular fusion","termid":"GO:0000747"}],"gene_count":56,"genes_by_uniquename":{"SJAG_00117":null,"SJAG_00210":null,"SJAG_00256":null,"SJAG_00472":null,"SJAG_00514":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00664":null,"SJAG_00781":null,"SJAG_00975":null,"SJAG_00990":null,"SJAG_00993":null,"SJAG_01084":null,"SJAG_01113":null,"SJAG_01254":null,"SJAG_01311":null,"SJAG_01345":null,"SJAG_01509":null,"SJAG_01699":null,"SJAG_01718":null,"SJAG_01794":null,"SJAG_01978":null,"SJAG_02066":null,"SJAG_02233":null,"SJAG_02266":null,"SJAG_02379":null,"SJAG_02380":null,"SJAG_02444":null,"SJAG_02472":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02730":null,"SJAG_02773":null,"SJAG_02785":null,"SJAG_02923":null,"SJAG_03067":null,"SJAG_03081":null,"SJAG_03309":null,"SJAG_03340":null,"SJAG_03346":null,"SJAG_03453":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03623":null,"SJAG_03735":null,"SJAG_03802":null,"SJAG_04009":null,"SJAG_04026":null,"SJAG_04206":null,"SJAG_04312":null,"SJAG_04509":null,"SJAG_04682":null,"SJAG_04813":null,"SJAG_05000":null,"SJAG_05153":null,"SJAG_06638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0000747","GO:0008150"],"is_obsolete":false,"name":"positive regulation of conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of conjugation with cellular fusion","type":"narrow"},{"name":"stimulation of conjugation with cellular fusion","type":"narrow"},{"name":"up regulation of conjugation with cellular fusion","type":"exact"},{"name":"up-regulation of conjugation with cellular fusion","type":"exact"},{"name":"upregulation of conjugation with cellular fusion","type":"exact"}],"termid":"GO:0031139","terms_by_termid":{"GO:0000750":null,"GO:0010514":null,"GO:0010515":null,"GO:0031139":null,"GO:0031141":null,"GO:0031142":null,"GO:0032005":null,"GO:0071507":null,"GO:0090029":null,"GO:1900237":null,"GO:1902917":null}}


id: MONDO:0018159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"atypical hemolytic-uremic syndrome","termid":"MONDO:0016244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"atypical hemolytic-uremic syndrome with DGKE deficiency","secondary_identifiers":["Orphanet:357008","UMLS:C5679921","DOID:0080388","MEDGEN:1826167","GARD:17543"],"synonyms":[{"name":"D-HUS with DGKE deficiency","type":"exact"},{"name":"aHUS with DGKE deficiency","type":"exact"},{"name":"atypical HUS with DGKE deficiency","type":"exact"},{"name":"hemolytic-uremic syndrome without diarrhea with DGKE deficiency","type":"exact"},{"name":"hemolytic-uremic syndrome without diarrhoea with DGKE deficiency","type":"exact"}],"termid":"MONDO:0018159","xrefs":{"Monarch":{"xref_id":"0018159"}}}


id: GO:0090379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of inextensible cellulose- and pectin-containing cell walls that are formed between the plasma membrane and primary cell wall of seed trichomes after cell expansion is complete.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type secondary cell wall biogenesis","termid":"GO:0009834"},{"relation_name":"part_of","term_name":"seed trichome differentiation","termid":"GO:0090376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"secondary cell wall biogenesis involved in seed trichome differentiation","synonyms":[{"name":"secondary cell wall biosynthesis involved in seed trichome differentiation","type":"exact"},{"name":"seed trichome secondary wall biosynthesis","type":"related"}],"termid":"GO:0090379"}


id: GO:0047626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + H2O = S-methyl-5'-thioadenosine + L-homoserine + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete adenosylmethionine hydrolase activity (obsolete GO:0047626)","synonyms":[{"name":"adenosyl methionine hydrolase activity","type":"exact"}],"termid":"GO:0047626"}


id: PBO:0043934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytotoxic and regulatory T cell molecule","termid":"PBO:0043934"}


id: GO:0050648
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 5(S)-hydroxyperoxy-6E,8Z,11Z,14Z-icosatetraenoic acid, a straight-chain fatty acid with twenty carbon atoms and four double bonds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid binding","termid":"GO:0036041"},{"relation_name":"is_a","term_name":"icosanoid binding","termid":"GO:0050542"},{"relation_name":"is_a","term_name":"fatty acid derivative binding","termid":"GO:1901567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"5(S)-hydroxyperoxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding","synonyms":[{"name":"5(S)-hydroxyperoxy-6E,8Z,11Z,14Z-eicosatetraenoic acid binding","type":"exact"}],"termid":"GO:0050648"}


id: PBO:0083516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF MES1/YGR264C, which encodes methionyl-tRNA synthetase","termid":"PBO:0083516"}


id: PBO:0075302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOCS2 antisense RNA 1","termid":"PBO:0075302"}


id: FYPO:0004528
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial translation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial translation phenotype","termid":"FYPO:0000632"},{"relation_name":"is_a","term_name":"abnormal translation","termid":"FYPO:0001797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitochondrial translation","synonyms":[{"name":"abnormal mitochondrial protein biosynthesis","type":"exact"},{"name":"abnormal mitochondrial protein synthesis","type":"exact"},{"name":"abnormal mitochondrial translation during mitotic cell cycle","type":"related"},{"name":"abnormal mitochondrial translation during vegetative growth","type":"exact"}],"termid":"FYPO:0004528"}


id: PBO:0090602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transaldolase Tal1","termid":"PBO:0090602"}


id: MONDO:0859614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low grade glioma that is characterized by a gene alteration that results in a MAPK pathway abnormality, with morphological features of astrocytoma or oligodendroglioma.","definition_xrefs":["DOID:0081260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"low grade glioma","termid":"MONDO:0021637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diffuse low-grade glioma, MAPK pathway–altered","termid":"MONDO:0859614","xrefs":{"Monarch":{"xref_id":"0859614"}}}


id: PBO:0090781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor zf-C2H2 type","termid":"PBO:0090781"}


id: PBO:0042513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin related family member 18, pseudogene","termid":"PBO:0042513"}


id: PBO:0062198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily U member 1 pseudogene","termid":"PBO:0062198"}


id: GO:0019095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which mitochondrial ribosomal RNA is transported to, or maintained in, the oocyte pole plasm. An example of this is found in Drosophila melanogaster.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pole plasm RNA localization","termid":"GO:0007316"},{"relation_name":"is_a","term_name":"mitochondrial RNA localization","termid":"GO:0019093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"pole plasm mitochondrial rRNA localization","secondary_identifiers":["GO:0048117"],"synonyms":[{"name":"establishment and maintenance of mitochondrial rRNA localization in pole plasm","type":"exact"},{"name":"oocyte pole plasm mitochondrial rRNA localization","type":"exact"},{"name":"pole plasm mitochondrial rRNA localisation","type":"exact"}],"termid":"GO:0019095"}


id: PBO:0085755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase involved in bud growth and assembly of the septin ring; proposed to have kinase-dependent and kinase-independent activities; negatively regulates Fpk1p kinase that stimulates phospholipid flippases Dnf1p and Dnf2p; undergoes autophosphorylation; similar to Hsl1p; GIN4 has a paralog, KCC4, that arose from the whole genome duplication","termid":"PBO:0085755"}


id: GO:0036219
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + H2O = GMP + H+ + diphosphate.","definition_xrefs":["RHEA:29391","GOC:dgf","PMID:22531138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0047429"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0047429","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"GTP diphosphatase activity","secondary_identifiers":["KEGG_REACTION:R00426"],"synonyms":[{"name":"GTP diphosphohydrolase (diphosphate-forming); guanosine 5'-triphosphate pyrophosphohydrolase","type":"exact"},{"name":"GTP diphosphohydrolase activity","type":"exact"},{"name":"GTP pyrophosphatase activity","type":"exact"}],"termid":"GO:0036219"}


id: MONDO:0014241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any precursor B-cell acute lymphoblastic leukemia in which the cause of the disease is a mutation in the PAX5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"precursor B-cell acute lymphoblastic leukemia","termid":"MONDO:0020511"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukemia, acute lymphoblastic, susceptibility to, 3","secondary_identifiers":["MEDGEN:816204","OMIM:615545","UMLS:C3809874"],"synonyms":[{"name":"ALL3","type":"related"},{"name":"PAX5 precursor B-cell acute lymphoblastic leukaemia","type":"exact"},{"name":"PAX5 precursor B-cell acute lymphoblastic leukemia","type":"exact"},{"name":"leukemia, acute lymphoblastic, susceptibility to, 3","type":"exact"},{"name":"leukemia, acute lymphoblastic, susceptibility to, type 3","type":"exact"},{"name":"precursor B-cell acute lymphoblastic leukaemia caused by mutation in PAX5","type":"exact"},{"name":"precursor B-cell acute lymphoblastic leukemia caused by mutation in PAX5","type":"exact"},{"name":"susceptibility to acute lymphoblastic leukaemia 3","type":"related"},{"name":"susceptibility to acute lymphoblastic leukemia 3","type":"related"}],"termid":"MONDO:0014241","xrefs":{"Monarch":{"xref_id":"0014241"}}}


id: PR:000050548
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A LIM domain-containing protein C4F6.12 (Schizosaccharomyces pombe) that has been phosphorylated at positions equivalent to Ser-3, Ser-24, Ser-31, Thr-55, Thr-64, Ser-67, Ser-97, Ser-136, and Thr-214 of the amino acid sequence represented by UniProtKB:O74398. Example: UniProtKB:O74398, Ser-3/Ser-24/Ser-31/Ser-67/Ser-97/Ser-136, MOD:00046|Thr-55/Thr-64/Thr-214, MOD:00047.","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:34133210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LIM domain-containing protein C4F6.12 (Schizosaccharomyces pombe)","termid":"PR:000050547"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pxl1/Phos(S3,S24,S31,T55,T64,S67,S97,S136,T214)","pombase_gene_id":"SPBC4F6.12","synonyms":[{"name":"PomBase_original_PRO_term_name: LIM domain-containing protein C4F6.12 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-pxl1/Phos:1","type":"exact"},{"name":"UniProtKB:O74398, Ser-3/Ser-24/Ser-31/Ser-67/Ser-97/Ser-136, MOD:00046|Thr-55/Thr-64/Thr-214, MOD:00047","type":"narrow"},{"name":"pxl1/Phos(S3,S24,S31,T55,T64,S67,S97,S136,T214)","type":"exact"}],"termid":"PR:000050548"}


id: PBO:0027675
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_metaphase_with_abnormal_spindle","termid":"PBO:0027675"}


id: GO:0046193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring, in the absence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"anaerobic phenol-containing compound metabolic process","termid":"GO:0042215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic phenol-containing compound catabolic process","synonyms":[{"name":"anaerobic phenol-containing compound breakdown","type":"exact"},{"name":"anaerobic phenol-containing compound catabolism","type":"exact"},{"name":"anaerobic phenol-containing compound degradation","type":"exact"}],"termid":"GO:0046193"}


id: GO:0072168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the tubules of the anterior mesonephros acquire their identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification involved in kidney development","termid":"GO:0072098"},{"relation_name":"is_a","term_name":"specification of mesonephric tubule identity","termid":"GO:0072167"},{"relation_name":"part_of","term_name":"anterior mesonephric tubule development","termid":"GO:0072165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of anterior mesonephric tubule identity","termid":"GO:0072168"}


id: PR:Q8WZJ7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A C-1-tetrahydrofolate synthase, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02532","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-1-tetrahydrofolate synthase, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.16","secondary_identifiers":["UniProtKB:Q8WZJ7"],"synonyms":[{"name":"C1-THF synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MTHFD1","type":"exact"}],"termid":"PR:Q8WZJ7"}


id: PBO:0086651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the vacuole and is induced in response to the DNA-damaging agent MMS; gene expression increases in response to Zymoliase treatment","termid":"PBO:0086651"}


id: PBO:0071709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 7","termid":"PBO:0071709"}


id: PBO:0027432
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_replication_fork_arrest_at_tRNA_locus","termid":"PBO:0027432"}


id: PBO:0050030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DQ beta 2","termid":"PBO:0050030"}


id: GO:1905927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of invadopodium disassembly.","definition_xrefs":["GOC:TermGenie","PMID:15684033","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of invadopodium disassembly (obsolete GO:1905927)","termid":"GO:1905927"}


id: GO:0110155
data:
  {"annotated_genes":["SJAG_02374"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91181],"is_not":false,"summary":null,"term":"GO:0110155"}]},"cv_name":"biological_process","definition":"Cleavage of the 5'-NAD-cap of an RNA. The NAD-cap is present at the 5'-end of some RNAs in both bacetria and eukaryotes. While it promotes RNA stability in bacteria, it promotes RNA decay in eukaryotes.","definition_xrefs":["PMID:25533955","GOC:sp","PMID:31101919","PMID:28283058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA decapping","termid":"GO:0110154"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02374":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"NAD-cap decapping","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110155","terms_by_termid":{"GO:0110155":null}}


id: PATO:0002142
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bracket","termid":"PATO:0002142"}


id: GO:0140070
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of hydrogen peroxide through a transmembrane aqueous pore or channel.","definition_xrefs":["PMID:23541115","PMID:27256569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"},{"relation_name":"is_a","term_name":"inorganic molecular entity transmembrane transporter activity","termid":"GO:0015318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"hydrogen peroxide channel activity","synonyms":[{"name":"hydrogen peroxide transmembrane transporter activity","type":"related"}],"termid":"GO:0140070"}


id: GO:0034887
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,4-dihydroisonicotinate + O2 = gamma-N-formylaminovinylacetaldehyde + CO2.","definition_xrefs":["UM-BBD_reactionID:r1348"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,4-dihydroisonicotinate 2,3-dioxygenase activity (obsolete GO:0034887)","synonyms":[{"name":"1,4-dihydroisonicotinate 2,3-dioxygenase activity","type":"exact"}],"termid":"GO:0034887"}


id: GO:0016735
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 8 reduced ferredoxin + 8 H+ + nitrogen + 16 ATP = 8 oxidized ferredoxin + 2 NH3 + 16 ADP + 16 phosphate.","definition_xrefs":["EC:1.18.6.1"],"gene_count":0,"genotype_count":0,"name":"obsolete vanadium-iron nitrogenase activity (obsolete GO:0016735)","synonyms":[{"name":"vanadium-iron nitrogenase activity","type":"exact"}],"termid":"GO:0016735"}


id: MONDO:0016688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most frequent histological variant of diffuse astrocytoma. It is predominantly composed of fibrillary neoplastic astrocytes. Nuclear atypia is a diagnostic criterion but mitotic activity, necrosis and microvascular proliferation are absent. The occasional or regional occurrence of gemistocytic neoplastic cells is compatible with the diagnosis of fibrillary astrocytoma. (WHO)","definition_xrefs":["NCIT:C4322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse astrocytoma","termid":"MONDO:0016686"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrillary astrocytoma","secondary_identifiers":["ICDO:9420/3","UMLS:C0334582","Orphanet:251601","GARD:20708","MedDRA:10065889","DOID:6726","MEDGEN:87270"],"synonyms":[{"name":"fibrillary astrocytic tumors","type":"exact"},{"name":"fibrillary astrocytic tumours","type":"exact"},{"name":"fibrillary astrocytoma","type":"exact"}],"termid":"MONDO:0016688","xrefs":{"Monarch":{"xref_id":"0016688"}}}


id: MONDO:0015226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome with limb malformations as a major feature (obsolete MONDO:0015226)","secondary_identifiers":["Orphanet:109009"],"termid":"MONDO:0015226","xrefs":{"Monarch":{"xref_id":"0015226"}}}


id: PBO:0054311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1703","termid":"PBO:0054311"}


id: PBO:0084480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maturase-like protein","termid":"PBO:0084480"}


id: PBO:0005355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR10","termid":"PBO:0005355"}


id: GO:0070037
data:
  {"annotated_genes":["SJAG_02024"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90805],"is_not":false,"summary":null,"term":"GO:0070037"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a pseudouridine residue in an rRNA molecule.","definition_xrefs":["GOC:imk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA methyltransferase activity","termid":"GO:0008649"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0140098","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"rRNA (pseudouridine) methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6790906"],"termid":"GO:0070037","terms_by_termid":{"GO:0070037":null}}


id: PBO:0111936
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKC subfamily","termid":"PBO:0111936"}


id: GO:0002187
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An octomeric protein complex having creatine kinase activity.","definition_xrefs":["PMID:16236486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"creatine kinase complex","termid":"GO:0002185"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737","GO:0005739"],"is_obsolete":false,"name":"mitochondrial creatine kinase complex","termid":"GO:0002187"}


id: PBO:0070177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 92 pseudogene","termid":"PBO:0070177"}


id: GO:0043744
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + N-acetyl-L-2-aminoadipate = ADP + N-acetyl-L-2-aminoadipate 6-phosphate.","definition_xrefs":["PMID:26966182","PMID:25392000","RHEA:41944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"},{"relation_name":"is_a","term_name":"amino acid kinase activity","termid":"GO:0019202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"N2-acetyl-L-aminoadipate kinase activity","secondary_identifiers":["GO:0043868","MetaCyc:RXN-5182"],"synonyms":[{"name":"N-acetyl-L-aminoadipate 5-phosphotransferase activity","type":"exact"},{"name":"N-acetylaminoadipate kinase activity","type":"exact"},{"name":"[LysW]-aminoadipate kinase","type":"related"},{"name":"acetylaminoadipate kinase activity","type":"exact"}],"termid":"GO:0043744"}


id: GO:0120202
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Stack of disc membranes located inside a rod photoreceptor outer segment, and containing densely packed molecules of rhodopsin photoreceptor proteins that traverse the lipid bilayer. It is thought that rod disc membranes arise as evaginations of the ciliary membrane near the base of the outer segment, which then become completely separated from the ciliary membrane, during the development of the rod outer segment.","definition_xrefs":["PMID:26574505","GOC:krc","PMID:6771304","GOC:pde","PMID:19501669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"photoreceptor disc membrane","termid":"GO:0097381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"rod photoreceptor disc membrane","termid":"GO:0120202"}


id: PBO:0057339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 525","termid":"PBO:0057339"}


id: GO:1900527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of nucleus size that is involved in G1 to G0 transition.","definition_xrefs":["GOC:TermGenie","GOC:al","PMID:19366728"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of nucleus size involved in G1 to G0 transition (obsolete GO:1900527)","synonyms":[{"name":"regulation of nuclear size involved in G1 to G0 transition","type":"exact"},{"name":"regulation of nuclear size involved in G1/G0 transition","type":"exact"},{"name":"regulation of nuclear size involved in cell cycle quiescence","type":"related"},{"name":"regulation of nuclear size involved in establishment of cell quiescence","type":"exact"},{"name":"regulation of nuclear size involved in stationary phase","type":"related"},{"name":"regulation of nuclear volume involved in G1 to G0 transition","type":"exact"},{"name":"regulation of nuclear volume involved in G1/G0 transition","type":"exact"},{"name":"regulation of nuclear volume involved in cell cycle quiescence","type":"related"},{"name":"regulation of nuclear volume involved in establishment of cell quiescence","type":"exact"},{"name":"regulation of nuclear volume involved in stationary phase","type":"related"},{"name":"regulation of nucleus size involved in G1 to G0 transition","type":"exact"},{"name":"regulation of nucleus size involved in G1/G0 transition","type":"exact"},{"name":"regulation of nucleus size involved in cell cycle quiescence","type":"related"},{"name":"regulation of nucleus size involved in establishment of cell quiescence","type":"exact"},{"name":"regulation of nucleus size involved in stationary phase","type":"related"}],"termid":"GO:1900527"}


id: PBO:0038574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABRA C-terminal like","termid":"PBO:0038574"}


id: FYPO:0005679
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the deubiquitination of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal after cells have been exposed to hydroxyurea.","definition_xrefs":["PomBase:mah","PMID:27151298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased proteolysis during vegetative growth","termid":"FYPO:0005443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0000002","FYPO:0002274","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein deubiquitination following cellular response to hydroxyurea during vegetative growth","synonyms":[{"name":"decreased protein deubiquitination during cellular response to hydroxyurea","type":"related"},{"name":"decreased protein deubiquitination following cellular response to HU","type":"exact"},{"name":"decreased protein deubiquitination following cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"decreased protein deubiquitylation following cellular response to hydroxyurea","type":"exact"},{"name":"reduced protein deubiquitination following cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0005679"}


id: PBO:0072717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"relaxin family peptide/INSL5 receptor 4","termid":"PBO:0072717"}


id: PBO:0075292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 31","termid":"PBO:0075292"}


id: GO:0033272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of myo-inositol hexakisphosphate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"myo-inositol phosphate transport","termid":"GO:0033271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"myo-inositol hexakisphosphate transport","synonyms":[{"name":"phytate transport","type":"exact"}],"termid":"GO:0033272"}


id: PBO:0081141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP41 zinc finger protein","termid":"PBO:0081141"}


id: PBO:0052513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 26","termid":"PBO:0052513"}


id: GO:0031640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in an organism that results in the killing of cells of another organism, including in some cases the death of the other organism. Killing here refers to the induction of death in one cell by another cell, not cell-autonomous death due to internal or other environmental conditions.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell killing","termid":"GO:0001906"},{"relation_name":"is_a","term_name":"disruption of cell in another organism","termid":"GO:0141061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"killing of cells of another organism","secondary_identifiers":["GO:0001908"],"synonyms":[{"name":"killing of cells of other organism","type":"exact"}],"termid":"GO:0031640"}


id: MONDO:0002249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease characterized by higher than normal platelet counts in the peripheral blood.","direct_ancestors":[{"relation_name":"is_a","term_name":"blood platelet disease","termid":"MONDO:0002245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocytosis disease","secondary_identifiers":["ICD9:289.9","MEDGEN:163397","DOID:2228","MESH:D013922","NCIT:C35530","UMLS:C0836924","SCTID:6631009"],"synonyms":[{"name":"Platelet count increased","type":"exact"},{"name":"Thrombocythaemia","type":"exact"},{"name":"elevated Platelet count","type":"exact"},{"name":"thrombocytosis","type":"related"}],"termid":"MONDO:0002249","xrefs":{"Monarch":{"xref_id":"0002249"}}}


