# terms

id: MONDO:0971178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant polycystic kidney disease","termid":"MONDO:0004691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005240"],"is_obsolete":false,"name":"polycystic kidney disease 8","secondary_identifiers":["OMIM:620903"],"termid":"MONDO:0971178","xrefs":{"Monarch":{"xref_id":"0971178"}}}


id: GO:0000737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of DNA, involving the hydrolysis of internal 3',5'-phosphodiester bonds in one or two strands of deoxyribonucleotides.","definition_xrefs":["GOC:elh","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA catabolic process, endonucleolytic (obsolete GO:0000737)","synonyms":[{"name":"DNA breakdown, endonucleolytic","type":"exact"},{"name":"DNA degradation, endonucleolytic","type":"exact"},{"name":"endonucleolytic DNA catabolism","type":"exact"},{"name":"endonucleolytic degradation of DNA","type":"exact"}],"termid":"GO:0000737"}


id: GO:0015556
data:
  {"annotated_genes":["SJAG_02140","SJAG_01406","SJAG_00671","SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015183"},{"annotations":[117953,101156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015140"},{"annotations":[101157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[87892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015131"},{"annotations":[101159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015141"},{"annotations":[101160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"}]},"cv_name":"molecular_function","definition":"Enables the transfer of C4-dicarboxylate from one side of a membrane to the other.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00671":null,"SJAG_01406":null,"SJAG_02140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"C4-dicarboxylate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015556","terms_by_termid":{"GO:0015131":null,"GO:0015140":null,"GO:0015141":null,"GO:0015183":null,"GO:0015366":null,"GO:0097434":null}}


id: PBO:0034809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex non-SMC MAGE family subunit Nse3","termid":"PBO:0034809"}


id: GO:0006055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of CMP-N-acetylneuraminate, a substance composed of 5-(acetylamino)-3,5-dideoxy-D-glycero-D-galacto-non-3-ulosonic acid in glycosidic linkage with cytidine monophosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"CMP-N-acetylneuraminate metabolic process","termid":"GO:0046381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"CMP-N-acetylneuraminate biosynthetic process","synonyms":[{"name":"CMP-N-acetylneuraminate anabolism","type":"exact"},{"name":"CMP-N-acetylneuraminate biosynthesis","type":"exact"},{"name":"CMP-N-acetylneuraminate formation","type":"exact"},{"name":"CMP-N-acetylneuraminate synthesis","type":"exact"}],"termid":"GO:0006055"}


id: PBO:0049883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 2","termid":"PBO:0049883"}


id: PR:O94580
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- udp7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin and WLM domain-containing metalloprotease SPCC1442.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.07c","synonyms":[{"name":"Spom972h-udp7","type":"exact"}],"termid":"PR:O94580"}


id: PBO:0026673
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_cellular_response_to_salt_stress","termid":"PBO:0026673"}


id: MONDO:0034673
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ectrodactyly with and without other manifestations (obsolete MONDO:0034673)","termid":"MONDO:0034673","xrefs":{"Monarch":{"xref_id":"0034673"}}}


id: MONDO:0021258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the optic choroid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optic choroid disorder","termid":"MONDO:0001898"},{"relation_name":"is_a","term_name":"uvea neoplasm","termid":"MONDO:0021225"},{"relation_name":"is_a","term_name":"vascular neoplasm","termid":"MONDO:0024296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"choroid neoplasm","secondary_identifiers":["MEDGEN:3059","NCIT:C2949","UMLS:C0008523"],"synonyms":[{"name":"choroid tumor","type":"exact"},{"name":"choroid tumour","type":"exact"},{"name":"choroidal neoplasm","type":"exact"},{"name":"choroidal tumor","type":"exact"},{"name":"choroidal tumour","type":"exact"},{"name":"neoplasm of choroid","type":"exact"},{"name":"neoplasm of optic choroid","type":"exact"},{"name":"neoplasm of the choroid","type":"exact"},{"name":"optic choroid neoplasm","type":"exact"},{"name":"optic choroid neoplasm (disease)","type":"exact"},{"name":"optic choroid tumor","type":"exact"},{"name":"optic choroid tumour","type":"exact"},{"name":"tumor of choroid","type":"exact"},{"name":"tumor of optic choroid","type":"exact"},{"name":"tumor of the choroid","type":"exact"},{"name":"tumour of choroid","type":"exact"},{"name":"tumour of optic choroid","type":"exact"},{"name":"tumour of the choroid","type":"exact"}],"termid":"MONDO:0021258","xrefs":{"Monarch":{"xref_id":"0021258"}}}


id: GO:0099581
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any ATPase coupled ion transmembrane transporter activity, occurring in the postsynaptic membrane, that is involved in regulation of postsynaptic membrane potential.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled ion transmembrane transporter activity","termid":"GO:0042625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ATPase coupled ion transmembrane transporter activity involved in regulation of postsynaptic membrane potential","synonyms":[{"name":"ATPase coupled ion transmembrane transporter activity involved in regulation of post-synaptic membrane potential","type":"exact"},{"name":"ATPase-coupled ion transmembrane transporter activity involved in regulation of postsynaptic membrane potential","type":"exact"}],"termid":"GO:0099581"}


id: PBO:0053274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor B1","termid":"PBO:0053274"}


id: FYPO:0005723
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of protein methyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abnormal protein methyltransferase activity","termid":"FYPO:0005723"}


id: PBO:0003826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII vesicle coat component Erp5/Erp6 (predicted)","termid":"PBO:0003826"}


id: PBO:0054261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1646","termid":"PBO:0054261"}


id: PBO:0036034
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K12_acetylation_at_subtelomere_during_vegetative_growth","termid":"PBO:0036034"}


id: PBO:0054437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1833","termid":"PBO:0054437"}


id: GO:0033714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: secondary alcohol + O2 = H2O2 + ketone.","definition_xrefs":["EC:1.1.3.18","RHEA:23180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"secondary-alcohol oxidase activity","secondary_identifiers":["KEGG_REACTION:R02277","MetaCyc:SECONDARY-ALCOHOL-OXIDASE-RXN"],"synonyms":[{"name":"polyvinyl alcohol oxidase activity","type":"related"},{"name":"secondary alcohol oxidase activity","type":"related"},{"name":"secondary-alcohol:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0033714"}


id: MONDO:0002174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A membrane on the vitreal surface of the retina resulting from the proliferation of one or more of three retinal elements: (1) fibrous astrocytes; (2) fibrocytes; and (3) retinal pigment epithelial cells. Localized epiretinal membranes may occur at the posterior pole of the eye without clinical signs or may cause marked loss of vision as a result of covering, distorting, or detaching the fovea centralis. Epiretinal membranes may cause vascular leakage and secondary retinal edema. In younger individuals some membranes appear to be developmental in origin and occur in otherwise normal eyes. The majority occur in association with retinal holes, ocular concussions, retinal inflammation, or after ocular surgery. (Newell, Ophthalmology: Principles and Concepts, 7th ed, p291)","definition_xrefs":["MESH:D019773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"degeneration of macula and posterior pole","termid":"MONDO:0002175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"preretinal fibrosis","secondary_identifiers":["ICD9:362.56","DOID:2006","UMLS:C0339543","MEDGEN:87388","ICD9:362.89","SCTID:367649002"],"synonyms":[{"name":"cellophane maculopathy","type":"exact"},{"name":"macular puckering of retina","type":"exact"},{"name":"macular retinal puckering","type":"exact"}],"termid":"MONDO:0002174","xrefs":{"Monarch":{"xref_id":"0002174"}}}


id: PBO:0060130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 31","termid":"PBO:0060130"}


id: PR:000044700
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.2, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe) whose methylation type is monomethylation. Example: UniProtKB:P09988-1, 2-136, Lys-10, MOD:00085.","definition_xrefs":["PRO:DAN","PMID:23849629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hht2/Me(K9)","termid":"PR:000027593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.2, initiator methionine removed K9-monomethylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"Spom-hht2/InitMet-/K9me1","type":"exact"}],"termid":"PR:000044700"}


id: MONDO:0022020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial syndrome combining short stature, microcephaly, mental deficiency, seizures, hearing loss, and skin lesions","definition_xrefs":["GARD:0000945"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Boudhina Yedes Khiari syndrome","secondary_identifiers":["MESH:C537939","UMLS:C2931668","MEDGEN:419467"],"termid":"MONDO:0022020","xrefs":{"Monarch":{"xref_id":"0022020"}}}


id: PBO:0074965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-7","termid":"PBO:0074965"}


id: FYPO:0002700
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal protein kinase activity","termid":"FYPO:0001381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"increased protein kinase activity","termid":"FYPO:0002700"}


id: GO:0033116
data:
  {"annotated_genes":["SJAG_01116"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[106512],"is_not":false,"summary":null,"term":"GO:0033116"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding any of the compartments of the endoplasmic reticulum (ER)-Golgi intermediate compartment system.","definition_xrefs":["PMID:16723730","GOC:mah","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"endoplasmic reticulum-Golgi intermediate compartment","termid":"GO:0005793"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01116":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"endoplasmic reticulum-Golgi intermediate compartment membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ER-Golgi intermediate compartment membrane","type":"exact"}],"termid":"GO:0033116","terms_by_termid":{"GO:0033116":null}}


id: PBO:0054896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2310","termid":"PBO:0054896"}


id: PBO:0042144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 4","termid":"PBO:0042144"}


id: PBO:0049482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.6 linker histone, cluster member","termid":"PBO:0049482"}


id: FYPO:0008060
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to a ubiquitin monomer is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:16138082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein-protein interaction","termid":"FYPO:0000703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000702"],"is_obsolete":false,"name":"normal mono ubiquitin binding","termid":"FYPO:0008060"}


id: MONDO:0020234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete craniofacial anomaly with cataract (obsolete MONDO:0020234)","secondary_identifiers":["Orphanet:98650"],"termid":"MONDO:0020234","xrefs":{"Monarch":{"xref_id":"0020234"}}}


id: PBO:0061606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleobindin 2","termid":"PBO:0061606"}


id: GO:0047307
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-2,4-diaminobutyrate + pyruvate = L-alanine + L-aspartate 4-semialdehyde.","definition_xrefs":["RHEA:12380","EC:2.6.1.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016769","GO:0016740"],"is_obsolete":false,"name":"diaminobutyrate-pyruvate transaminase activity","secondary_identifiers":["KEGG_REACTION:R02293","MetaCyc:2.6.1.46-RXN"],"synonyms":[{"name":"L-2,4-diaminobutanoate:pyruvate aminotransferase activity","type":"related"},{"name":"L-diaminobutyric acid transaminase activity","type":"related"},{"name":"diaminobutyrate--pyruvate aminotransferase activity","type":"related"},{"name":"diaminobutyrate-pyruvate aminotransferase activity","type":"exact"}],"termid":"GO:0047307"}


id: MONDO:0003204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma characterized by the presence of a villous architectural pattern. It may arise from a villous adenoma.","definition_xrefs":["NCIT:C4142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"villous adenocarcinoma","secondary_identifiers":["UMLS:C0334306","DOID:4917","MEDGEN:137741","ICDO:8262/3"],"synonyms":[{"name":"villous adenocarcinoma","type":"exact"},{"name":"villous adenocarcinoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003204","xrefs":{"Monarch":{"xref_id":"0003204"}}}


id: FYECO:0000042
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which a fatty acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:alock"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ fatty acid","termid":"FYECO:0000042"}


id: MONDO:0012448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary spastic paraplegia in which the cause of the disease is a mutation in the ZFYVE27 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 33","secondary_identifiers":["UMLS:C1853251","MEDGEN:339943","OMIM:610244","DOID:0110784","MESH:C565214"],"synonyms":[{"name":"SPG33","type":"exact"},{"name":"ZFYVE27 hereditary spastic paraplegia","type":"exact"},{"name":"autosomal dominant spastic paraplegia 33","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in ZFYVE27","type":"exact"},{"name":"hereditary spastic paraplegia type 33","type":"exact"},{"name":"spastic paraplegia 33, autosomal dominant","type":"related"}],"termid":"MONDO:0012448","xrefs":{"Monarch":{"xref_id":"0012448"}}}


id: PBO:0016541
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic RECombination deficient","termid":"PBO:0016541"}


id: PBO:0087706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; contributes to both positive and negative transcriptional regulation; dispensible for basal transcription","termid":"PBO:0087706"}


id: MONDO:0042915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Schmitt-Gillenwater-Kelly syndrome (obsolete MONDO:0042915)","termid":"MONDO:0042915","xrefs":{"Monarch":{"xref_id":"0042915"}}}


id: FYECO:0000201
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing peptone, yeast extract and other components. The concentration of glucose is typically around 2-3%. Note that peptone, which is a mixture of nutrients generated by proteolytic digestion of animal protein with trypsin, is not normally a component of S. pombe rich media (it is however normally present in S. cerevisiae rich media).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YPD","synonyms":[{"name":"glucose rich medium, peptone/YE nitrogen source","type":"broad"}],"termid":"FYECO:0000201"}


id: GO:1905189
data:
  {"annotated_genes":["SJAG_00145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905191"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metaphase/anaphase transition of meiosis II.","definition_xrefs":["PMID:21389117","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metaphase/anaphase transition of meiotic cell cycle","termid":"GO:1902102"},{"relation_name":"regulates","term_name":"metaphase/anaphase transition of meiosis II","termid":"GO:1990950"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of metaphase/anaphase transition of meiosis II","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of meiosis II metaphase/anaphase transition","type":"exact"}],"termid":"GO:1905189","terms_by_termid":{"GO:1905191":null}}


id: MONDO:0013535
data:
  {"annotated_genes":["SJAG_01596"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85439],"is_not":false,"summary":null,"term":"MONDO:0013535"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01596":null},"genotype_count":0,"is_obsolete":false,"name":"hydroxyacyl glutathione hydrolase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614033","MESH:C564215","UMLS:C3279657","MEDGEN:481287"],"synonyms":[{"name":"glyoxalase 2 deficiency","type":"related"},{"name":"glyoxalase II deficiency","type":"exact"},{"name":"hydroxyacyl glutathione hydrolase deficiency","type":"exact"}],"termid":"MONDO:0013535","terms_by_termid":{"MONDO:0013535":null},"xrefs":{"Monarch":{"xref_id":"0013535"}}}


id: GO:0018113
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine = D-lysine.","definition_xrefs":["EC:5.1.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"lysine racemase activity","secondary_identifiers":["RHEA:22864","MetaCyc:LYSINE-RACEMASE-RXN"],"termid":"GO:0018113"}


id: PBO:0082458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ca2+-dependent cysteine protease; may cleave specific substrates during the stress response; regulates apoptosis upon H2O2 treatment; required for clearance of insoluble protein aggregates during normal growth; implicated in cell cycle dynamics and lifespan extension; undergoes autocatalytic processing; similar to mammalian metacaspases, but exists as a monomer due to an extra pair of anti-parallel beta-strands that block potential dimerization","termid":"PBO:0082458"}


id: MONDO:0014402
data:
  {"annotated_genes":["SJAG_01537"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85768],"is_not":false,"summary":null,"term":"MONDO:0014402"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary lipodystrophy","termid":"MONDO:0020087"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"},{"relation_name":"is_a","term_name":"Mendelian encephalopathy","termid":"MONDO:0100198"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01537":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066","MONDO:0005559"],"is_obsolete":false,"name":"severe neurodegenerative syndrome with lipodystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17552","Orphanet:363400","UMLS:C4014700","OMIM:615924","MEDGEN:863137"],"synonyms":[{"name":"PELD","type":"related"},{"name":"encephalopathy, progressive, with or without lipodystrophy","type":"related"},{"name":"severe neurodegenerative syndrome due to BSCL2 deficiency","type":"exact"}],"termid":"MONDO:0014402","terms_by_termid":{"MONDO:0014402":null},"xrefs":{"Monarch":{"xref_id":"0014402"}}}


id: PBO:0051681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibin subunit beta C","termid":"PBO:0051681"}


id: PBO:0069382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 642, pseudogene","termid":"PBO:0069382"}


id: PBO:0004995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptide transmemembrane transporter (predicted)","termid":"PBO:0004995"}


id: GO:1905366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intralumenal vesicle formation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:bc","GOC:PARL","PMID:26911690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"negative regulation of endosome organization","termid":"GO:1904979"},{"relation_name":"is_a","term_name":"regulation of intralumenal vesicle formation","termid":"GO:1905365"},{"relation_name":"negatively_regulates","term_name":"intralumenal vesicle formation","termid":"GO:0070676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of intralumenal vesicle formation","synonyms":[{"name":"down regulation of endosome membrane budding","type":"exact"},{"name":"down regulation of intralumenal vesicle formation","type":"exact"},{"name":"down-regulation of endosome membrane budding","type":"exact"},{"name":"down-regulation of intralumenal vesicle formation","type":"exact"},{"name":"downregulation of endosome membrane budding","type":"exact"},{"name":"downregulation of intralumenal vesicle formation","type":"exact"},{"name":"inhibition of endosome membrane budding","type":"narrow"},{"name":"inhibition of intralumenal vesicle formation","type":"narrow"},{"name":"negative regulation of endosome membrane budding","type":"exact"}],"termid":"GO:1905366"}


id: FYPO:0005848
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which H3-K9 specific histone methyltransferase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal histone methyltransferase activity (H3-K9 specific) activity","termid":"FYPO:0005846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000652","FYPO:0000641","FYPO:0001985","FYPO:0000661","FYPO:0000002","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abolished histone methyltransferase activity (H3-K9 specific) activity","synonyms":[{"name":"abolished H3-K9 specific histone methyltransferase activity","type":"exact"},{"name":"histone methyltransferase activity (H3-K9 specific) activity abolished","type":"exact"}],"termid":"FYPO:0005848"}


id: MONDO:0958165
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A kidney sarcoma that is characterized by a proliferation of anaplastic spindle cells with bizarre, pleomorphic nuclei and atypical mitotic figures.","definition_xrefs":["DOID:0081418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney sarcoma","termid":"MONDO:0002930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"anaplastic sarcoma of the kidney","secondary_identifiers":["MEDGEN:1661979","UMLS:C4722276"],"termid":"MONDO:0958165","xrefs":{"Monarch":{"xref_id":"0958165"}}}


id: MONDO:0007701
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive familial heart block","termid":"MONDO:0019490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"progressive familial heart block type II","secondary_identifiers":["GARD:4879","SCTID:698251009","MEDGEN:333884","OMIM:140400","UMLS:C1841658","ICD9:426.6","DOID:0111075","MESH:C564202"],"synonyms":[{"name":"PFHB2","type":"exact"},{"name":"PFHBII","type":"related"},{"name":"heart block progressive familial type 2","type":"related"},{"name":"progressive familial heart block type 2","type":"related"},{"name":"progressive familial heart block, type II","type":"related"}],"termid":"MONDO:0007701","xrefs":{"Monarch":{"xref_id":"0007701"}}}


id: PBO:0030123
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_L-canavanine","termid":"PBO:0030123"}


id: PBO:0062743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily H member 2 pseudogene","termid":"PBO:0062743"}


id: PBO:0041386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C5orf34 antisense RNA 1","termid":"PBO:0041386"}


id: PBO:0036016
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-J-shaped_vegetative_cell","termid":"PBO:0036016"}


id: PBO:0041997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 43","termid":"PBO:0041997"}


id: PBO:0080018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 4","termid":"PBO:0080018"}


id: MOD:00408
data:
  {"annotated_genes":["SJAG_00733","SJAG_02522"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[80026,79928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00050"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino or imino hydrogen with an acetyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylated residue","termid":"MOD:00394"},{"relation_name":"is_a","term_name":"N-acylated residue","termid":"MOD:00670"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00733":null,"SJAG_02522":null},"genotype_count":0,"is_obsolete":false,"name":"N-acetylated residue","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"N-Acetyl","type":"exact"},{"name":"N-Acetylation","type":"exact"},{"name":"NAcRes","type":"exact"}],"termid":"MOD:00408","terms_by_termid":{"MOD:00050":null}}


id: MONDO:1010719
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperphosphatemia that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperphosphatemia, non-human animal","termid":"MONDO:1010110"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperphosphatemia, cattle","secondary_identifiers":["OMIA:002052-9913"],"termid":"MONDO:1010719","xrefs":{"Monarch":{"xref_id":"1010719"}}}


id: GO:1904842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitroglycerin stimulus.","definition_xrefs":["GO_REF:0000071","PMID:25626975","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nitroglycerin","synonyms":[{"name":"response to nitroglycerine","type":"exact"},{"name":"response to nitroglycerol","type":"exact"},{"name":"response to trinitroglycerin","type":"exact"},{"name":"response to trinitroglycerol","type":"exact"}],"termid":"GO:1904842"}


id: PBO:0076040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 38","termid":"PBO:0076040"}


id: PBO:0058944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIX23 pseudogene 3","termid":"PBO:0058944"}


id: GO:0035599
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the methylthiolation (-SCH3 addition) of the beta-carbon of peptidyl-aspartic acid to form peptidyl-L-beta-methylthioaspartic acid.","definition_xrefs":["RESID:AA0232","PMID:8844851","PMID:18252828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylthiotransferase activity","termid":"GO:0035596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016782","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"aspartic acid methylthiotransferase activity","termid":"GO:0035599"}


id: GO:1903266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ornithine catabolic process.","definition_xrefs":["GO_REF:0000058","PMID:12679340","GOC:TermGenie","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of ornithine metabolic process","termid":"GO:0090368"},{"relation_name":"regulates","term_name":"ornithine catabolic process","termid":"GO:0006593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"regulation of ornithine catabolic process","synonyms":[{"name":"regulation of ornithine breakdown","type":"exact"},{"name":"regulation of ornithine catabolism","type":"exact"},{"name":"regulation of ornithine degradation","type":"exact"}],"termid":"GO:1903266"}


id: GO:0002079
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The acrosomal membrane region that underlies the acrosomal vesicle and is located toward the sperm nucleus. This region is responsible for molecular interactions allowing the sperm to penetrate the zona pellucida and fuses with the egg plasma membrane.","definition_xrefs":["PMID:3899643","PMID:8936405","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"part_of","term_name":"acrosomal membrane","termid":"GO:0002080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"inner acrosomal membrane","termid":"GO:0002079"}


id: PBO:0043135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 3","termid":"PBO:0043135"}


id: MONDO:0032636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 33","secondary_identifiers":["MEDGEN:1648420","GARD:16332","OMIM:618253","DOID:0112097","UMLS:C4748840"],"synonyms":[{"name":"MC1DN33","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 33","type":"related"}],"termid":"MONDO:0032636","xrefs":{"Monarch":{"xref_id":"0032636"}}}


id: MOD:01971
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to N2-ornithine.","definition_xrefs":["RESID:AA0613","PubMed:23434852","ChEBI:136763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidated residue","termid":"MOD:00674"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-glutamyl N2-ornithine","synonyms":[{"name":"(2S)-5-amino-2-([(4S)-4-amino-4-carboxybutanoyl]amino)pentanoic acid","type":"exact"},{"name":"(2S)-5-amino-2-[(4S)-4-amino-4-carboxybutanamido]pentanoic acid","type":"exact"},{"name":"4-amino-5-[(4-amino-1-carboxy-butyl)amino]-5-ketovaleric acid","type":"exact"},{"name":"4-amino-5-[(4-amino-1-carboxy-butyl)amino]-5-oxopentanoic acid","type":"exact"},{"name":"5-glutamyl N2-ornithine","type":"exact"},{"name":"MOD_RES 5-glutamyl N2-ornithine","type":"exact"},{"name":"N2-(L-isoglutamyl)-L-ornithine","type":"exact"},{"name":"N2-(gamma-glutamyl)ornithine","type":"exact"},{"name":"gamma-glutamylornithine","type":"exact"}],"termid":"MOD:01971"}


id: PBO:0040572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-galactosyltransferase 6","termid":"PBO:0040572"}


id: PBO:0044527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dishevelled binding antagonist of beta catenin 1","termid":"PBO:0044527"}


id: GO:0030378
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine = D-serine.","definition_xrefs":["RHEA:10980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"serine racemase activity","secondary_identifiers":["EC:5.1.1.18","Reactome:R-HSA-9014766","MetaCyc:5.1.1.18-RXN"],"termid":"GO:0030378"}


id: GO:0031856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a parathyroid hormone receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"parathyroid hormone receptor binding","synonyms":[{"name":"parathyroid hormone receptor ligand","type":"narrow"}],"termid":"GO:0031856"}


id: PR:O74765
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proline--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03227","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC24C6.03","secondary_identifiers":["UniProtKB:O74765"],"synonyms":[{"name":"ProRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PARS2","type":"exact"},{"name":"prolyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74765"}


id: GO:0007323
data:
  {"annotated_genes":["SJAG_04923","SJAG_04398","SJAG_00730","SJAG_05016"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89042,100895],"is_not":false,"summary":null,"term":"GO:0007323"},{"annotations":[92661,87312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071432"}]},"cv_name":"biological_process","definition":"The generation of a mature, active peptide pheromone via processes unique to its processing and modification. An example of this process is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00730":null,"SJAG_04398":null,"SJAG_04923":null,"SJAG_05016":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"peptide pheromone maturation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0007324","GO:0046613","GO:0007326"],"synonyms":[{"name":"pheromone processing","type":"exact"}],"termid":"GO:0007323","terms_by_termid":{"GO:0007323":null,"GO:0071432":null}}


id: GO:0003106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which angiotensin directly decreases the rate of glomerular filtration in the kidney. Glomerular filtration is the process whereby blood is filtered by the glomerulus into the renal tubule.","definition_xrefs":["GOC:mah","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of renal output by angiotensin","termid":"GO:0003083"},{"relation_name":"part_of","term_name":"negative regulation of glomerular filtration","termid":"GO:0003105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glomerular filtration by angiotensin","synonyms":[{"name":"angiotensin-mediated regulation of glomerular filtration","type":"broad"},{"name":"regulation of glomerular filtration by angiotensin","type":"broad"}],"termid":"GO:0003106"}


id: PBO:0024848
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Latrunculin Sensitive Cyclin knockout","termid":"PBO:0024848"}


id: FYPO:0003080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which genetic imprinting at the mating-type locus does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal genetic imprinting at mating-type locus","termid":"FYPO:0003079"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000293","FYPO:0001320"],"is_obsolete":false,"name":"abolished genetic imprinting at mating-type locus","synonyms":[{"name":"abolished genetic imprinting at mating-type locus during mitotic cell cycle","type":"related"},{"name":"genetic imprinting at mating-type locus abolished","type":"exact"},{"name":"genetic imprinting at mating-type locus abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003080"}


id: GO:0001192
data:
  {"annotated_genes":["SJAG_00119"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001193"}]},"cv_name":"biological_process","definition":"Suppression of the occurrence of transcriptional errors, such as substitutions and/or insertions of nucleotides that do not correctly match the template base, during the process of transcription elongation on a DNA template.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"},{"relation_name":"part_of","term_name":"DNA-templated transcription elongation","termid":"GO:0006354"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00119":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"maintenance of transcriptional fidelity during transcription elongation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0001194"],"synonyms":[{"name":"maintenance of transcriptional fidelity during DNA-dependent transcription elongation","type":"exact"},{"name":"maintenance of transcriptional fidelity during DNA-dependent transcription elongation from bacterial-type RNA polymerase promoter","type":"exact"},{"name":"maintenance of transcriptional fidelity during DNA-templated transcription elongation","type":"exact"},{"name":"maintenance of transcriptional fidelity during DNA-templated transcription elongation from bacterial-type RNA polymerase promoter","type":"narrow"}],"termid":"GO:0001192","terms_by_termid":{"GO:0001193":null}}


id: PBO:0076493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonyl-tRNA synthetase 1","termid":"PBO:0076493"}


id: GO:0007320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The introduction of semen or sperm into the genital tract of a female.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-organism reproductive process","termid":"GO:0044703"},{"relation_name":"is_a","term_name":"multi-multicellular organism process","termid":"GO:0044706"},{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"copulation","termid":"GO:0007620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"insemination","secondary_identifiers":["Wikipedia:Insemination"],"termid":"GO:0007320"}


id: PBO:0027779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_cytokinesis","termid":"PBO:0027779"}


id: PBO:0061888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPCML intronic transcript 1","termid":"PBO:0061888"}


id: GO:0015811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-cystine (also known as dicysteine) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid transport","termid":"GO:0000101"},{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"L-amino acid transport","termid":"GO:0015807"},{"relation_name":"is_a","term_name":"modified amino acid transport","termid":"GO:0072337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"L-cystine transport","termid":"GO:0015811"}


id: GO:0044764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that is carried out at the cellular level which involves another organism of the same or different species.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism cellular process (obsolete GO:0044764)","termid":"GO:0044764"}


id: PBO:0073663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SINHCAF pseudogene 3","termid":"PBO:0073663"}


id: GO:0004878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the C5a product of the complement cascade and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["ISBN:0781735149","GOC:add","GOC:pg","GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin receptor activity","termid":"GO:0001847"},{"relation_name":"is_a","term_name":"complement receptor activity","termid":"GO:0004875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"complement component C5a receptor activity","secondary_identifiers":["GO:0004944"],"synonyms":[{"name":"C5a anaphylatoxin receptor activity","type":"related"}],"termid":"GO:0004878"}


id: MONDO:1012917
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alzheimer disease that occurs in pigs due to a mutation in the PSEN1 gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"Alzheimer disease, non-human animal","termid":"MONDO:1011443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alzheimer disease, PSEN1-related, pig","secondary_identifiers":["OMIA:002493-9823"],"termid":"MONDO:1012917","xrefs":{"Monarch":{"xref_id":"1012917"}}}


id: PR:O42944
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- omh2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside alpha-1,2-mannosyltransferase homolog 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.09c","synonyms":[{"name":"Spom972h-omh2","type":"exact"}],"termid":"PR:O42944"}


id: FYPO:0005926
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during G1 phase of the mitotic cell cycle is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein level during mitotic G1 phase","synonyms":[{"name":"normal protein accumulation during mitotic G1 phase","type":"related"},{"name":"normal protein level during G1 phase of mitotic cell cycle","type":"related"},{"name":"normal protein level during mitotic G1 phase during vegetative growth","type":"exact"}],"termid":"FYPO:0005926"}


id: PBO:0075277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 19 pseudogene 2","termid":"PBO:0075277"}


id: GO:0050139
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nicotinate + UDP-D-glucose = N-(beta-D-glucosyl)nicotinate + UDP.","definition_xrefs":["EC:2.4.1.196","RHEA:19437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"nicotinate-N-glucosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01722","MetaCyc:NICOTINATE-GLUCOSYLTRANSFERASE-RXN"],"synonyms":[{"name":"UDP-glucose:nicotinate N-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:nicotinic acid-N-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:nicotinate N-glucosyltransferase activity","type":"related"},{"name":"nicotinate glucosyltransferase activity","type":"broad"},{"name":"uridine diphosphoglucose-nicotinate N-glucosyltransferase activity","type":"related"}],"termid":"GO:0050139"}


id: MONDO:1012231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary adenomatosis, non-human animal","termid":"MONDO:1011927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary adenomatosis, dog","secondary_identifiers":["OMIA:000840-9615"],"termid":"MONDO:1012231","xrefs":{"Monarch":{"xref_id":"1012231"}}}


id: GO:0035846
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the oviduct epithelium over time from its initial formation to the mature structure. An oviduct is a tube through which an ova passes from the ovary to the uterus, or from the ovary to the outside of the organism. The oviduct epithelium is the specialized epithelium that lines the oviduct.","definition_xrefs":["PMID:34496237","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"oviduct development","termid":"GO:0060066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oviduct epithelium development","synonyms":[{"name":"fallopian tube epithelium development","type":"narrow"}],"termid":"GO:0035846"}


id: PBO:0078091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex 2 pseudogene 8","termid":"PBO:0078091"}


id: GO:0097720
data:
  {"annotated_genes":["SJAG_04668","SJAG_03879","SJAG_03793","SJAG_03631","SJAG_03799","SJAG_02858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91882,97601,112850,118069],"is_not":false,"summary":null,"term":"GO:0097720"},{"annotations":[115626,100493],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0106057"}]},"cv_name":"biological_process","definition":"Any intracellular signal transduction in which the signal is passed on within the cell by activation of a transcription factor as a consequence of dephosphorylation by Ca(2+)-activated calcineurin. The process begins with calcium-dependent activation of the phosphatase calcineurin. Calcineurin is a calcium- and calmodulin-dependent serine/threonine protein phosphatase with a conserved function in eukaryotic species from yeast to humans. In yeast and fungi, calcineurin regulates stress signaling and cell cycle, and sporulation and virulence in pathogenic fungi. In metazoans, calcineurin is involved in cell commitment, organogenesis and organ development and immune function of T-lymphocytes. By a conserved mechanism, calcineurin phosphatase activates fungal Crz1 and mammalian NFATc by dephosphorylation and translocation of these transcription factors to the nucleus to regulate gene expression.","definition_xrefs":["PMID:26851544","PMID:25655284","GOC:di","PMID:25878052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-mediated signaling","termid":"GO:0019722"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02858":null,"SJAG_03631":null,"SJAG_03793":null,"SJAG_03799":null,"SJAG_03879":null,"SJAG_04668":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"calcineurin-mediated signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"calcineurin signaling","type":"related"},{"name":"calcineurin-mediated signalling","type":"exact"}],"termid":"GO:0097720","terms_by_termid":{"GO:0097720":null,"GO:0106057":null}}


id: FYPO:0008050
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in meiosis in which dimethylation of lysine at position 4 of histone H3 is abolished.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during meiotic cell cycle","termid":"FYPO:0006459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"abolished histone H3-K4 methylation during meiosis","termid":"FYPO:0008050"}


id: FYPO:0005915
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal at the portion of ribosomal DNA encoding 5S rRNA. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PomBase:mah","PMID:25798942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased nucleosome occupancy","termid":"FYPO:0004491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000641"],"is_obsolete":false,"name":"decreased nucleosome occupancy at 5S rRNA genes","synonyms":[{"name":"decreased nucleosome occupancy at 5S rRNA genes during mitotic cell cycle","type":"related"},{"name":"decreased nucleosome occupancy at 5S rRNA genes during vegetative growth","type":"exact"},{"name":"decreased nucleosome occupancy in 5S rRNA genes","type":"exact"},{"name":"reduced nucleosome occupancy at 5S rRNA genes","type":"exact"}],"termid":"FYPO:0005915"}


id: GO:0042446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hormone biosynthetic process","synonyms":[{"name":"hormone anabolism","type":"exact"},{"name":"hormone biosynthesis","type":"exact"},{"name":"hormone formation","type":"exact"},{"name":"hormone synthesis","type":"exact"}],"termid":"GO:0042446"}


id: PBO:0080315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 79 pseudogene","termid":"PBO:0080315"}


id: GO:0019435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sophorosyloxydocosanoate, 13-sophorosyloxydocosanoate 6',6''-diacetate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid biosynthetic process","termid":"GO:0009247"},{"relation_name":"is_a","term_name":"sophorosyloxydocosanoate metabolic process","termid":"GO:0019434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sophorosyloxydocosanoate biosynthetic process","secondary_identifiers":["MetaCyc:SOPHOROSYLOXYDOCOSANOATE-SYN-PWY"],"synonyms":[{"name":"sophorosyloxydocosanoate anabolism","type":"exact"},{"name":"sophorosyloxydocosanoate biosynthesis","type":"exact"},{"name":"sophorosyloxydocosanoate formation","type":"exact"},{"name":"sophorosyloxydocosanoate synthesis","type":"exact"}],"termid":"GO:0019435"}


id: MONDO:0859188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with seizures and brain abnormalities","secondary_identifiers":["OMIM:619517","MEDGEN:1794189","UMLS:C5561979"],"termid":"MONDO:0859188","xrefs":{"Monarch":{"xref_id":"0859188"}}}


id: PBO:0069567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 839, pseudogene","termid":"PBO:0069567"}


id: PBO:0083708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane localized phosphoryltransferase; adds phosphoethanolamine onto the third mannose residue of the glycosylphosphatidylinositol (GPI) anchor precursor; similar to human PIG-O protein","termid":"PBO:0083708"}


id: GO:0060222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the process in which a cell becomes committed to a retinal cone cell fate. Retinal cone cell fate commitment is the process in which the developmental fate of a cell becomes restricted such that it will develop into a retinal cone cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate commitment","termid":"GO:0010453"},{"relation_name":"regulates","term_name":"retinal cone cell fate commitment","termid":"GO:0046551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of retinal cone cell fate commitment","termid":"GO:0060222"}


id: PBO:0077461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 184C","termid":"PBO:0077461"}


id: GO:0036007
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A body present in the cytoplasm of some dinoflagellates, which is the source of bioluminescence; emits light on acidification in the presence of oxygen.","definition_xrefs":["GOC:pr","PMID:4501583","PMID:5642469","GOC:mag"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"scintillon","termid":"GO:0036007"}


id: PBO:0078840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon TGG) 3-4","termid":"PBO:0078840"}


id: PBO:0108570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Las1","termid":"PBO:0108570"}


id: MONDO:0006045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant glandular epithelial neoplasm characterized by the presence of clear and hobnail cells. It is highly associated with ovarian endometriosis, pelvic endometriosis and paraendocrine hypercalcemia.","definition_xrefs":["NCIT:C40078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian clear cell cancer","termid":"MONDO:0000548"},{"relation_name":"is_a","term_name":"ovarian adenocarcinoma","termid":"MONDO:0002752"},{"relation_name":"is_a","term_name":"clear cell adenocarcinoma","termid":"MONDO:0005004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian clear cell adenocarcinoma","secondary_identifiers":["GARD:21652","UMLS:C1518693","icd11.foundation:315825558","SCTID:763131005","DOID:5304","MEDGEN:276659","Orphanet:398971","EFO:1000042"],"synonyms":[{"name":"clear cell adenocarcinoma of ovary","type":"exact"},{"name":"clear cell adenocarcinoma of the ovary","type":"related"},{"name":"ovarian clear cell adenocarcinoma","type":"exact"},{"name":"ovary clear cell adenocarcinoma","type":"exact"}],"termid":"MONDO:0006045","xrefs":{"Monarch":{"xref_id":"0006045"}}}


id: PBO:0003485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage factor two Cft2/polyadenylation factor CPSF-73 (predicted)","termid":"PBO:0003485"}


id: GO:0032552
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a deoxyribonucleotide, any compound consisting of a deoxyribonucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the deoxyribose moiety.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide binding","termid":"GO:0000166"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"deoxyribonucleotide binding","termid":"GO:0032552"}


id: GO:1905648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of shell calcification.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:14648763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biomineral tissue development","termid":"GO:0070167"},{"relation_name":"regulates","term_name":"shell calcification","termid":"GO:0031215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of shell calcification","termid":"GO:1905648"}


id: GO:0071011
data:
  {"annotated_genes":["SJAG_02304","SJAG_00313","SJAG_01870","SJAG_03460","SJAG_02469","SJAG_03469","SJAG_01301","SJAG_01308","SJAG_03245","SJAG_03430","SJAG_01819","SJAG_00147","SJAG_00322","SJAG_05208","SJAG_04529","SJAG_03410"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92854,93651,94657,95082,98288,101686,102042,105324,105360,105927,110111,111936,112374,114426,115361],"is_not":false,"summary":null,"term":"GO:0071011"},{"annotations":[105124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071005"}]},"cv_name":"cellular_component","definition":"A spliceosomal complex that is formed by the recruitment of a preassembled U5-containing tri-snRNP to the prespliceosome. Although all 5 snRNPs are present, the precatalytic spliceosome is catalytically inactive. The precatalytic spliceosome includes many proteins in addition to those found in the associated snRNPs.","definition_xrefs":["GOC:mah","GOC:ab","PMID:18322460","GOC:krc","PMID:19239890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal complex","termid":"GO:0005681"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00147":null,"SJAG_00313":null,"SJAG_00322":null,"SJAG_01301":null,"SJAG_01308":null,"SJAG_01819":null,"SJAG_01870":null,"SJAG_02304":null,"SJAG_02469":null,"SJAG_03245":null,"SJAG_03410":null,"SJAG_03430":null,"SJAG_03460":null,"SJAG_03469":null,"SJAG_04529":null,"SJAG_05208":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"precatalytic spliceosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mammalian spliceosomal complex B","type":"narrow"},{"name":"mammalian spliceosomal complex B1","type":"narrow"},{"name":"yeast spliceosomal complex A2-1","type":"narrow"}],"termid":"GO:0071011","terms_by_termid":{"GO:0071005":null,"GO:0071011":null}}


id: GO:0061787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A peptidoglycan endopeptidase activity that acts on a peptidoglycan cross-bridge.","definition_xrefs":["GOC:dph","GOC:jh","PMID:22748813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycan endopeptidase activity","termid":"GO:0061785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0008233","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"peptidoglycan cross-bridge peptide endopeptidase activity","synonyms":[{"name":"lysostaphin activity","type":"narrow"}],"termid":"GO:0061787"}


id: PBO:0003580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-5 sterol desaturase Erg32","termid":"PBO:0003580"}


id: PATO:0000485
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000485 mild response (obsolete PATO:0000485)","termid":"PATO:0000485"}


id: PBO:0069866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1153, pseudogene","termid":"PBO:0069866"}


id: PBO:0058353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4726","termid":"PBO:0058353"}


id: GO:0019451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown into pyruvate of L-cystine, catalyzed by the enzyme cysteine dioxygenase (EC:1.13.11.20).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteine catabolic process to pyruvate","termid":"GO:0019450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006520","GO:0006790","GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-cysteine catabolic process to pyruvate, using cysteine dioxygenase","secondary_identifiers":["MetaCyc:CYSTEINE-DEG-PWY"],"synonyms":[{"name":"L-cysteine breakdown to pyruvate, using cysteine dioxygenase","type":"exact"},{"name":"L-cysteine degradation to pyruvate, using cysteine dioxygenase","type":"exact"}],"termid":"GO:0019451"}


id: PR:O13688
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nse6 gene.","definition_xrefs":["UniProtKB:O13688","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-structural maintenance of chromosome element 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.08c","synonyms":[{"name":"Spom972h-nse6","type":"exact"},{"name":"core protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"non-SMC element 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13688"}


id: PBO:0048688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLIPR1 antisense RNA 1","termid":"PBO:0048688"}


id: GO:0046156
data:
  {"annotated_genes":["SJAG_01786","SJAG_01192"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97288,114930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019354"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving siroheme, a tetrahydroporphyrin with adjacent, reduced pyrrole rings.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme metabolic process","termid":"GO:0042168"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01192":null,"SJAG_01786":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"siroheme metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sirohaem metabolic process","type":"exact"},{"name":"sirohaem metabolism","type":"exact"},{"name":"siroheme metabolism","type":"exact"}],"termid":"GO:0046156","terms_by_termid":{"GO:0019354":null}}


id: PATO:0001271
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of green hue and high saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"green","termid":"PATO:0000320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saturated green","synonyms":[{"name":"bright green","type":"related"}],"termid":"PATO:0001271"}


id: PBO:0089911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin-6 ATPase subunit","termid":"PBO:0089911"}


id: MONDO:0010186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rickets caused by a defect in the VDR gene, encoding the vitamin D receptor. This form of rickets is characterized by hypocalcemia, elevated 1,25-dihydroxyvitamin D (calcitriol) concentrations and may also manifest with alopecia.","definition_xrefs":["NCIT:C131075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D-dependent rickets, type 2","termid":"MONDO:0019642"},{"relation_name":"is_a","term_name":"abnormal mineralization disorder","termid":"MONDO:0800096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"vitamin D-dependent rickets, type 2A","secondary_identifiers":["MEDGEN:90989","MESH:C562794","OMIM:277440","GARD:18169","SCTID:237894002","UMLS:C0342646","DOID:0080884"],"synonyms":[{"name":"Pddr 2A","type":"related"},{"name":"Pseudovitamin D-deficiency, type 2A","type":"related"},{"name":"VDDR2A","type":"related"},{"name":"VDR vitamin D-dependent rickets, type 2","type":"exact"},{"name":"generalised resistance to 1,25-dihydroxyvitamin D","type":"related"},{"name":"generalized resistance to 1,25-dihydroxyvitamin D","type":"related"},{"name":"hereditary 1,25 dihydroxyvitamin D-resistant rickets with abnormal vitamin D receptor with alopecia","type":"exact"},{"name":"hypocalcemic vitamin D-resistant rickets","type":"related"},{"name":"rickets, hereditary vitamin D-resistant","type":"related"},{"name":"rickets, vitamin D-resistant, type IIA","type":"exact"},{"name":"rickets-alopecia syndrome","type":"related"},{"name":"vitamin D dependent rickets 2a","type":"exact"},{"name":"vitamin D receptor deficiency rickets","type":"exact"},{"name":"vitamin D-dependent rickets, type 2 caused by mutation in VDR","type":"exact"},{"name":"vitamin D-dependent rickets, type 2A","type":"exact"},{"name":"vitamin D-dependent rickets, type 2A, with or without alopecia","type":"related"},{"name":"vitamin D-resistant rickets with end-organ unresponsiveness to 1,25-dihydroxycholecalciferol","type":"related"},{"name":"vitamin d-dependent rickets type II with alopecia","type":"exact"}],"termid":"MONDO:0010186","xrefs":{"Monarch":{"xref_id":"0010186"}}}


id: GO:0008454
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + (N-acetyl-beta-D-glucosaminyl-1,2)-alpha-D-mannosyl-1,3-(beta-N-acetyl-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6)-beta-D-mannosyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,4-(N-acetyl-D-glucosaminyl-1,2)-alpha-D-mannosyl-1,3-(beta-N-acetyl-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6)-beta-D-mannosyl-R.","definition_xrefs":["EC:2.4.1.145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity","secondary_identifiers":["Reactome:R-HSA-975903","RHEA:16057","Reactome:R-HSA-9696980","MetaCyc:2.4.1.145-RXN"],"synonyms":[{"name":"GnTIV activity","type":"related"},{"name":"N-acetylglucosaminyltransferase IV activity","type":"related"},{"name":"N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase IV activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:3-[2-(N-acetyl-beta-D-glucosaminyl)-alpha-D-mannosyl]-glycoprotein 4-beta-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"alpha-1,3-mannosylglycoprotein beta-1,4-N-acetylglucosaminyltransferase activity","type":"exact"},{"name":"beta-acetylglucosaminyltransferase IV activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-glycopeptide beta-4-acetylglucosaminyltransferase IV activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-glycopeptide beta4-acetylglucosaminyltransferase IV","type":"related"}],"termid":"GO:0008454"}


id: PATO:0001769
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's location of features or characteristics along an axis.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"positional polarity","synonyms":[{"name":"cellular polarity","type":"related"}],"termid":"PATO:0001769"}


id: PBO:0058853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8082","termid":"PBO:0058853"}


id: PBO:0017710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase involved in depalmitoylation (predicted)","termid":"PBO:0017710"}


id: MONDO:0016182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete qualitative or quantitative defects of protein O-mannose beta1, 2N-acetylglucosaminyltransferase (obsolete MONDO:0016182)","secondary_identifiers":["Orphanet:209024"],"synonyms":[{"name":"qualitative or quantitative defects of protein POMGNT1","type":"exact"}],"termid":"MONDO:0016182","xrefs":{"Monarch":{"xref_id":"0016182"}}}


id: PBO:0086216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that binds to the Rap1p C-terminus; acts synergistically with Rif1p to help control telomere length and establish telomeric silencing; deletion results in telomere elongation; RIF2 has a paralog, ORC4, that arose from the whole genome duplication","termid":"PBO:0086216"}


id: _global:is_unit_of
data:
  {"annotation_feature_type":"gene","cv_name":"pato.ontology","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_unit_of","termid":"_global:is_unit_of"}


id: MONDO:0013031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"periventricular nodular heterotopia","termid":"MONDO:0020341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"chromosome 5Q14.3 deletion syndrome, distal","secondary_identifiers":["GARD:15589","UMLS:C2752071","OMIM:612881","MEDGEN:442882","MESH:C567876"],"synonyms":[{"name":"chromosome 5Q14.3 deletion syndrome, distal","type":"exact"},{"name":"heterotopia, periventricular, associated with chromosome 5Q deletion","type":"related"},{"name":"periventricular nodular heterotopia 5","type":"related"}],"termid":"MONDO:0013031","xrefs":{"Monarch":{"xref_id":"0013031"}}}


id: PBO:0047547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 7 pseudogene 6","termid":"PBO:0047547"}


id: GO:0047250
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + UDP-D-glucose = 4-(beta-D-glucosyloxy)benzoate + H+ + UDP.","definition_xrefs":["RHEA:15153","EC:2.4.1.194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-hydroxybenzoate 4-O-beta-D-glucosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01304","MetaCyc:2.4.1.194-RXN"],"synonyms":[{"name":"HBA glucosyltransferase activity","type":"related"},{"name":"PHB glucosyltransferase activity","type":"related"},{"name":"PHB-O-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:4-(beta-D-glucopyranosyloxy)benzoic acid glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:4-hydroxybenzoate 4-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:4-hydroxybenzoate 4-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"p-hydroxybenzoate glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-4-hydroxybenzoate glucosyltransferase activity","type":"related"}],"termid":"GO:0047250"}


id: MONDO:0006985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete subependymoma (obsolete MONDO:0006985)","termid":"MONDO:0006985","xrefs":{"Monarch":{"xref_id":"0006985"}}}


id: MONDO:1010079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Prekallikrein deficiency that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prekallikrein deficiency, non-human animal","secondary_identifiers":["OMIA:000819"],"termid":"MONDO:1010079","xrefs":{"Monarch":{"xref_id":"1010079"}}}


id: FYPO:0006124
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of peptidyl-arginine to form peptidyl-N(omega),N(omega)-dimethyl-L-arginine in one or more specific proteins, or of specific protein sites, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification during vegetative growth","termid":"FYPO:0000549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal asymmetric protein arginine dimethylation during vegetative growth","synonyms":[{"name":"normal asymmetric protein arginine dimethylation during mitotic cell cycle","type":"related"},{"name":"normal peptidyl-arginine methylation, to asymmetrical-dimethyl arginine, during vegetative growth","type":"exact"}],"termid":"FYPO:0006124"}


id: MONDO:0016912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 14q deletion is a chromosome abnormality that occurs when there is a missing (deleted) copy of genetic material on the long arm (q) of chromosome 14.","definition_xrefs":["GARD:0003722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the long arm of chromosome 14","secondary_identifiers":["Orphanet:262110","UMLS:C2931697","MEDGEN:444119","GARD:3722"],"synonyms":[{"name":"14q deletion","type":"related"},{"name":"14q monosomy","type":"related"},{"name":"chromosome 14q deletion","type":"related"},{"name":"deletion 14q","type":"related"},{"name":"monosomy 14q","type":"related"},{"name":"partial deletion of chromosome 14q","type":"exact"},{"name":"partial deletion of the long arm of chromosome type 14","type":"exact"},{"name":"partial monosomy 14q","type":"related"},{"name":"partial monosomy of chromosome 14q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome 14","type":"exact"}],"termid":"MONDO:0016912","xrefs":{"Monarch":{"xref_id":"0016912"}}}


id: PBO:0111295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase chadoprop types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"goa_version","termid":"PBO:0111295"}


id: PBO:0061981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AT member 2 pseudogene","termid":"PBO:0061981"}


id: PBO:0062729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily B member 3 pseudogene","termid":"PBO:0062729"}


id: MONDO:0016143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoglycanopathy","termid":"MONDO:0016140"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qualitative or quantitative defects of gamma-sarcoglycan","secondary_identifiers":["MEDGEN:1842385","GARD:20392","UMLS:C5680805","Orphanet:207067"],"synonyms":[{"name":"gamma-sarcoglycanopathy","type":"narrow"}],"termid":"MONDO:0016143","xrefs":{"Monarch":{"xref_id":"0016143"}}}


id: GO:1900506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of iron-sulfur-molybdenum cofactor assembly.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of iron-sulfur cluster assembly","termid":"GO:1903329"},{"relation_name":"regulates","term_name":"iron-sulfur-molybdenum cofactor assembly","termid":"GO:0044593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0016226"}],"interesting_parent_ids":["GO:0016226","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of iron-sulfur-molybdenum cofactor assembly","synonyms":[{"name":"regulation of FeMoco assembly","type":"exact"},{"name":"regulation of FeMoco biosynthetic process","type":"exact"},{"name":"regulation of iron molybdenum cofactor assembly","type":"exact"},{"name":"regulation of iron molybdenum cofactor biosynthesis","type":"exact"},{"name":"regulation of iron molybdenum cofactor biosynthetic process","type":"exact"}],"termid":"GO:1900506"}


id: GO:0060899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the commitment of a neurectodermal cell to a specialized neurectodermal cell that will give rise to the optic vesicle.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription involved in eye field cell fate commitment of camera-type eye (obsolete GO:0060899)","termid":"GO:0060899"}


id: PBO:0052467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 13","termid":"PBO:0052467"}


id: MONDO:0009342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extremely rare malformative association, described in only two siblings to date, and characterized by Hirschsprung disease (defined by the presence of an aganglionic segment of variable extent in the terminal part of the colon that leads to the symptoms of intestinal obstruction including constipation and abdominal distension), polydactyly of hands and/or feet, unilateral renal agenesis, hypertelorism and congenital deafness. There have been no further descriptions in the literature since 1988.","definition_xrefs":["Orphanet:2155"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"intestinal motility disease","termid":"MONDO:0021189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Hirschsprung disease-hearing loss-polydactyly syndrome","secondary_identifiers":["MESH:C565518","OMIM:235740","GARD:157","UMLS:C1856112","SCTID:721221000","MEDGEN:341066"],"synonyms":[{"name":"Hirschsprung disease associated with polydactyly, unilateral renal agenesis, hypertelorism, and congenital deafness","type":"narrow"},{"name":"Hirschsprung disease with polydactyly, renal agenesis, and deafness","type":"narrow"},{"name":"Hirschsprung disease, deafness and polydactyly","type":"narrow"},{"name":"Hirschsprung disease-deafness-polydactyly syndrome","type":"narrow"},{"name":"Santos Mateus Leal syndrome","type":"related"},{"name":"Santos-Mateus-Leal syndrome","type":"exact"}],"termid":"MONDO:0009342","xrefs":{"Monarch":{"xref_id":"0009342"}}}


id: MONDO:0011969
data:
  {"annotated_genes":["SJAG_01950"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84562],"is_not":false,"summary":null,"term":"MONDO:0011969"}]},"cv_name":"mondo","definition":"A form of congenital disorders of N-linked glycosylation that is characterized by gastrointestinal symptoms (diarrhea, vomiting, feeding problems with failure to thrive, protein-losing enteropathy), edema and ascites (including hydrops fetalis), hepatomegaly, renal tubulopathy, coagulation anomalies due to thrombocytopenia, brain involvement (psychomotor delay, seizures, ataxia), facial dysmorphism (low-set ears and retrognathia), pes equinovarus, and muscular hypotonia. Cataracts may also be observed. Prognosis is usually poor. The disease is caused by loss-of-function mutations in the gene ALG8 (11q14.1), resulting in a block in the initial step of protein glycosylation.","definition_xrefs":["Orphanet:79325"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"ALG8-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:419692","OMIM:608104","UMLS:C2931002","MESH:C535746","GARD:9834","SCTID:720977000","DOID:0080560"],"synonyms":[{"name":"ALG8-CDG","type":"exact"},{"name":"ALG8-CDG (CDG-Ih)","type":"related"},{"name":"ALG8-congenital disorder of glycosylation","type":"exact"},{"name":"CDG 1H","type":"related"},{"name":"CDG Ih","type":"related"},{"name":"CDG syndrome type Ih","type":"exact"},{"name":"CDG-Ih","type":"exact"},{"name":"CDG1H","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type Ih","type":"exact"},{"name":"congenital disorder of glycosylation type 1h","type":"exact"},{"name":"congenital disorder of glycosylation type Ih","type":"exact"},{"name":"congenital disorder of glycosylation, type Ih","type":"related"},{"name":"glucosyltransferase 2 deficiency","type":"exact"}],"termid":"MONDO:0011969","terms_by_termid":{"MONDO:0011969":null},"xrefs":{"Monarch":{"xref_id":"0011969"}}}


id: GO:0031545
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl L-proline + 2-oxoglutarate + O2 = peptidyl trans-4-hydroxy-L-proline + succinate + CO2.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-proline dioxygenase activity","termid":"GO:0031543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"peptidyl-proline 4-dioxygenase activity","secondary_identifiers":["Reactome:R-HSA-1234165","RHEA:63484","Reactome:R-HSA-1234166","Reactome:R-HSA-1234181","Reactome:R-HSA-1234179","Reactome:R-HSA-1234177","Reactome:R-HSA-1234173"],"synonyms":[{"name":"HIF-type prolyl 4-hydroxylase","type":"narrow"},{"name":"prolyl 4-hydroxylase","type":"broad"}],"termid":"GO:0031545"}


id: PBO:0001921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clp1-interacting protein Nsk1","termid":"PBO:0001921"}


id: PBO:0043918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crooked neck pre-mRNA splicing factor 1","termid":"PBO:0043918"}


id: GO:1904052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein targeting to vacuole involved in autophagy.","definition_xrefs":["GO_REF:0000058","GOC:pad","GOC:PARL","GOC:TermGenie","PMID:22020285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular protein transport","termid":"GO:0090317"},{"relation_name":"is_a","term_name":"negative regulation of vacuolar transport","termid":"GO:1903336"},{"relation_name":"is_a","term_name":"regulation of protein targeting to vacuole involved in autophagy","termid":"GO:1904051"},{"relation_name":"negatively_regulates","term_name":"protein targeting to vacuole involved in autophagy","termid":"GO:0071211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006605"},{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0006605"],"is_obsolete":false,"name":"negative regulation of protein targeting to vacuole involved in autophagy","synonyms":[{"name":"down regulation of protein targeting to vacuole involved in autophagy","type":"exact"},{"name":"down-regulation of protein targeting to vacuole involved in autophagy","type":"exact"},{"name":"downregulation of protein targeting to vacuole involved in autophagy","type":"exact"},{"name":"inhibition of protein targeting to vacuole involved in autophagy","type":"narrow"}],"termid":"GO:1904052"}


id: PATO:0000045
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000045 absolute frequency (obsolete PATO:0000045)","termid":"PATO:0000045"}


id: GO:1901028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrion organization","termid":"GO:0010821"},{"relation_name":"is_a","term_name":"regulation of mitochondrial membrane permeability","termid":"GO:0046902"},{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"mitochondrial outer membrane permeabilization","termid":"GO:0097345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0007005","GO:0006810","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway","synonyms":[{"name":"regulation of MOMP","type":"exact"},{"name":"regulation of mitochondrial outer membrane permeabilization","type":"broad"}],"termid":"GO:1901028"}


id: GO:0032034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the head/neck region of a myosin II heavy chain.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin head/neck binding","termid":"GO:0032028"},{"relation_name":"is_a","term_name":"myosin II heavy chain binding","termid":"GO:0032038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0008092","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"myosin II head/neck binding","termid":"GO:0032034"}


id: GO:0046508
data:
  {"annotated_genes":["SJAG_03556"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004013"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any carbon-sulfur bond, C-S.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03556":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"hydrolase activity, acting on carbon-sulfur bonds","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.13.-.-"],"synonyms":[{"name":"hydrolase activity, acting on carbon-sulphur bonds","type":"exact"}],"termid":"GO:0046508","terms_by_termid":{"GO:0004013":null}}


id: PBO:0078137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 16","termid":"PBO:0078137"}


id: GO:0044664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cellular process of the reversion of cells to their original cell type, occurring as part of the process of phenotypic switching. Phenotypic switching begins with changes in cell morphology and altered gene expression patterns and ends when the morphology of a population of cells has reverted back to the default state, accompanied by altered expression patterns.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete reversion of cell type to default state involved in phenotypic switching (obsolete GO:0044664)","termid":"GO:0044664"}


id: FYPO:0000416
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid separation begins before anaphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid separation","termid":"FYPO:0000670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000337","FYPO:0001320","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"premature mitotic sister chromatid separation","synonyms":[{"name":"advanced mitotic sister chromatid separation","type":"exact"},{"name":"chromosome segregation: premature","type":"broad"},{"name":"premature chromosome separation during vegetative growth","type":"exact"},{"name":"premature mitotic chromosome separation","type":"exact"},{"name":"premature sister chromatid separation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000416"}


id: GO:1901622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of smoothened signaling pathway involved in dorsal/ventral neural tube patterning.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smoothened signaling pathway","termid":"GO:0045880"},{"relation_name":"is_a","term_name":"regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","termid":"GO:1901620"},{"relation_name":"positively_regulates","term_name":"smoothened signaling pathway involved in dorsal/ventral neural tube patterning","termid":"GO:0060831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","synonyms":[{"name":"activation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"activation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"activation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"activation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"positive regulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"positive regulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"positive regulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up regulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up regulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up regulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up-regulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up-regulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up-regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up-regulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"upregulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"upregulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"upregulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"upregulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"}],"termid":"GO:1901622"}


id: PBO:0043168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cartilage intermediate layer protein","termid":"PBO:0043168"}


id: FYPO:0006003
data:
  {"alleles_by_uniquename":{"SJAG_04883:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04883","name":"ptp4delta","uniquename":"SJAG_04883:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001007"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of cellular component organization at the cellular level is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0016043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization phenotype","termid":"FYPO:0000334"},{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04883":null},"genotype_count":1,"genotypes_by_uniquename":{"ptp4delta":{"display_name":"ptp4delta","display_uniquename":"ptp4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04883:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular component organization","references_by_uniquename":{"PMID:36695178":null},"single_locus_annotated_genes":["SJAG_04883"],"single_locus_genotype_uniquenames":["ptp4delta"],"synonyms":[{"name":"normal cellular component organisation","type":"exact"},{"name":"normal cellular component organization at cellular level","type":"exact"}],"termid":"FYPO:0006003","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0001007":null}}


id: GO:0015146
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a pentose sugar from one side of a membrane to the other. Pentose is a monosaccharide with 5 carbon atoms.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide transmembrane transporter activity","termid":"GO:0015145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"pentose transmembrane transporter activity","termid":"GO:0015146"}


id: MOD:00830
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to an N-methyl-L-proline.","definition_xrefs":["PubMed:3127388","RESID:AA0419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated proline","termid":"MOD:01417"},{"relation_name":"is_a","term_name":"N-methylated proline","termid":"MOD:01462"},{"relation_name":"is_a","term_name":"alpha-amino monomethylated residue","termid":"MOD:01680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methyl-L-proline","synonyms":[{"name":"(S)-1-methylpyrrolidine-2-carboxylic acid","type":"exact"},{"name":"1-methylpyrrolidine-2-carboxylic acid","type":"exact"},{"name":"MOD_RES N-methylproline","type":"exact"},{"name":"N-methyl-L-proline","type":"exact"},{"name":"N-methylated L-proline","type":"exact"},{"name":"NMePro","type":"exact"},{"name":"hygric acid","type":"exact"}],"termid":"MOD:00830"}


id: GO:0005024
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a transforming growth factor beta (TGFbeta) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.","definition_xrefs":["GOC:signaling","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein serine/threonine kinase activity","termid":"GO:0004675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0140096","GO:0016740","GO:0003824","GO:0016301","GO:0003674","GO:0038023","GO:0004672"],"is_obsolete":false,"name":"transforming growth factor beta receptor activity","synonyms":[{"name":"TGF-beta receptor activity","type":"exact"},{"name":"TGFbeta receptor activity","type":"exact"},{"name":"TGFbeta-activated receptor activity","type":"exact"},{"name":"TGFbetaR","type":"exact"},{"name":"transforming growth factor beta-activated receptor activity","type":"exact"}],"termid":"GO:0005024"}


id: PBO:0028479
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_growing_cell_tip","termid":"PBO:0028479"}


id: PBO:0085567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein essential for meiotic DNA replication and sporulation; cytoplasmic protein; subunit of the MIS complex which controls mRNA methylation during during the induction of sporulation; also interacts with Orc2p, which is a component of the origin recognition complex","termid":"PBO:0085567"}


id: SO:0001704
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 14th residue (a lysine), from the start of the H3 histone protein is acetylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"histone_3_acetylation_site","termid":"SO:0001973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K14_acetylation_site","synonyms":[{"name":"H3K14 acetylation site","type":"exact"},{"name":"H3K14ac","type":"exact"}],"termid":"SO:0001704"}


id: GO:0046312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphoarginine, a phosphorylated derivative of the amino acid arginine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoarginine metabolic process","termid":"GO:0006604"},{"relation_name":"is_a","term_name":"phosphagen biosynthetic process","termid":"GO:0042396"},{"relation_name":"is_a","term_name":"L-amino acid biosynthetic process","termid":"GO:0170034"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"phosphoarginine biosynthetic process","synonyms":[{"name":"phosphoarginine anabolism","type":"exact"},{"name":"phosphoarginine biosynthesis","type":"exact"},{"name":"phosphoarginine formation","type":"exact"},{"name":"phosphoarginine synthesis","type":"exact"}],"termid":"GO:0046312"}


id: PBO:0049585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 3","termid":"PBO:0049585"}


id: PBO:0050143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 2 pseudogene 1","termid":"PBO:0050143"}


id: PBO:0047134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 171 member B","termid":"PBO:0047134"}


id: PBO:0003037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid transporter Aat1 (predicted)","termid":"PBO:0003037"}


id: GO:0003922
data:
  {"annotated_genes":["SJAG_00964","SJAG_04634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92906],"is_not":false,"summary":null,"term":"GO:0003922"},{"annotations":[100693],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0003921"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + XMP + L-glutamine + H2O = AMP + diphosphate + GMP + L-glutamate + 2H+.","definition_xrefs":["RHEA:11680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00964":null,"SJAG_04634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"GMP synthase (glutamine-hydrolyzing) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:GMP_synthase_(glutamine-hydrolysing)","Reactome:R-HSA-9748957","Reactome:R-HSA-73792","MetaCyc:GMP-SYN-GLUT-RXN","EC:6.3.5.2"],"synonyms":[{"name":"GMP synthase (glutamine-hydrolysing)","type":"related"},{"name":"GMP synthetase (glutamine-hydrolysing)","type":"related"},{"name":"GMP synthetase (glutamine-hydrolyzing) activity","type":"related"},{"name":"glutamine amidotransferase activity","type":"related"},{"name":"guanosine 5'-monophosphate synthetase activity","type":"related"},{"name":"guanosine monophosphate synthetase (glutamine-hydrolyzing)","type":"related"},{"name":"guanylate synthetase (glutamine-hydrolyzing)","type":"related"},{"name":"xanthosine 5'-phosphate amidotransferase activity","type":"related"},{"name":"xanthosine-5'-phosphate:L-glutamine amido-ligase (AMP-forming)","type":"related"}],"termid":"GO:0003922","terms_by_termid":{"GO:0003921":null,"GO:0003922":null}}


id: MONDO:0011888
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An immunodeficiency associated with increased susceptibility to invasive infections caused by pyogenic bacteria.","definition_xrefs":["Orphanet:70592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 67","secondary_identifiers":["MEDGEN:375137","NANDO:2200762","OMIM:607676","MESH:C564352","NANDO:1200361","UMLS:C1843256","MESH:C563662","GARD:10311"],"synonyms":[{"name":"IPD1","type":"related"},{"name":"IRAK-4 deficiency","type":"related"},{"name":"IRAK4 deficiency","type":"exact"},{"name":"IRAK4D","type":"related"},{"name":"Interleukin receptor-associated kinase deficiency","type":"related"},{"name":"immunodeficiency 67","type":"exact"},{"name":"immunodeficiency due to interleukin-1 receptor-associated kinase-4 deficiency","type":"exact"},{"name":"invasive pneumococcal disease, protection against","type":"related"},{"name":"invasive pneumococcal disease, recurrent isolated, 1","type":"exact"},{"name":"invasive pneumococcal disease, recurrent isolated, type 1","type":"exact"}],"termid":"MONDO:0011888","xrefs":{"Monarch":{"xref_id":"0011888"}}}


id: GO:0034424
data:
  {"annotated_genes":["SJAG_07012","SJAG_03511"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98366,112059],"is_not":false,"summary":null,"term":"GO:0034424"}]},"cv_name":"cellular_component","definition":"A membrane-associated protein complex that is required for a late stage of endosomal transport. In budding yeast, this complex consists of Vps55p and Vps68p proteins.","definition_xrefs":["PMID:18216282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"endosome membrane","termid":"GO:0010008"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03511":null,"SJAG_07012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737","GO:0005768","GO:0031410"],"is_obsolete":false,"name":"Vps55/Vps68 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034424","terms_by_termid":{"GO:0034424":null}}


id: GO:0031643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the formation of a myelin sheath around nerve axons.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myelination","termid":"GO:0031641"},{"relation_name":"is_a","term_name":"positive regulation of nervous system process","termid":"GO:0031646"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"positively_regulates","term_name":"myelination","termid":"GO:0042552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myelination","synonyms":[{"name":"activation of myelination","type":"narrow"},{"name":"stimulation of myelination","type":"narrow"},{"name":"up regulation of myelination","type":"exact"},{"name":"up-regulation of myelination","type":"exact"},{"name":"upregulation of myelination","type":"exact"}],"termid":"GO:0031643"}


id: PBO:0047549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 7 pseudogene 8","termid":"PBO:0047549"}


id: GO:0007319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate that oskar mRNAs are effectively translated into protein.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation","termid":"GO:0017148"},{"relation_name":"is_a","term_name":"regulation of oskar mRNA translation","termid":"GO:0046011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of oskar mRNA translation","synonyms":[{"name":"down regulation of oskar mRNA translation","type":"exact"},{"name":"down-regulation of oskar mRNA translation","type":"exact"},{"name":"downregulation of oskar mRNA translation","type":"exact"},{"name":"inhibition of oskar mRNA translation","type":"narrow"}],"termid":"GO:0007319"}


id: PBO:0083109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase required for nonhomologous end-joining (NHEJ); forms stable heterodimer with required cofactor Lif1p, interacts with Nej1p; involved in meiosis, not essential for vegetative growth; mutations in human ortholog lead to ligase IV syndrome and Dubowitz syndrome","termid":"PBO:0083109"}


id: SO:0001210
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of mRNA (not divisible by 3 bases) that is skipped or added during the process of translational frameshifting (GO:0006452), causing the reading frame to be different.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_region","termid":"SO:0000836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translational_frameshift","secondary_identifiers":["http://en.wikipedia.org/wiki/Translational_frameshift"],"synonyms":[{"name":"INSDC_qualifier:ribosomal_slippage","type":"exact"},{"name":"ribosomal frameshift","type":"exact"},{"name":"ribosomal slippage","type":"exact"},{"name":"translational frameshift","type":"exact"}],"termid":"SO:0001210"}


id: PBO:0036373
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uner Tan Syndrome","termid":"PBO:0036373"}


id: MONDO:0008861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any 3-methylcrotonyl-CoA carboxylase deficiency in which the cause of the disease is a mutation in the MCCC1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urea cycle disorder","termid":"MONDO:0004739"},{"relation_name":"is_a","term_name":"3-methylcrotonyl-CoA carboxylase deficiency","termid":"MONDO:0018950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"3-methylcrotonyl-CoA carboxylase 1 deficiency","secondary_identifiers":["MESH:C535308","DOID:0080579","MONDO:0022326","GARD:5665","OMIM:210200","UMLS:C0268600","MEDGEN:78691"],"synonyms":[{"name":"3 Alpha methylcrotonylglycinuria 1","type":"related"},{"name":"3 Methylcrotonyl-CoA carboxylase 1 deficiency","type":"related"},{"name":"3 Methylcrotonyl-CoA carboxylase deficiency","type":"related"},{"name":"3 alpha methylcrotonylglycinuria 1","type":"related"},{"name":"3 methylcrotonylglycinuria","type":"related"},{"name":"3-MCC deficiency","type":"related"},{"name":"3-METHYLCROTONYL-CoA carboxylase 1 deficiency","type":"related"},{"name":"3-Methylcrotonyl-Coa carboxylase 1 deficiency","type":"exact"},{"name":"3-Methylcrotonyl-Coa carboxylase deficiency","type":"related"},{"name":"3-Methylcrotonyl-Coenzyme A carboxylase deficiency","type":"related"},{"name":"3-methylcrotonyl-CoA carboxylase 1 deficiency","type":"exact"},{"name":"3-methylcrotonyl-CoA carboxylase deficiency caused by mutation in MCCC1","type":"exact"},{"name":"3-methylcrotonylglycinuria","type":"related"},{"name":"3-methylcrotonylglycinuria 1","type":"related"},{"name":"3-methylcrotonylglycinuria I","type":"related"},{"name":"Bmcc deficiency","type":"related"},{"name":"MCC 1 deficiency","type":"related"},{"name":"MCC deficiency","type":"related"},{"name":"MCC1 deficiency","type":"related"},{"name":"MCC1D","type":"related"},{"name":"MCCC1 3-methylcrotonyl-CoA carboxylase deficiency","type":"exact"},{"name":"MCCD type 1","type":"related"},{"name":"Mcc1 deficiency","type":"related"},{"name":"Mccd type 1","type":"related"},{"name":"Methylcrotonyl-Coa carboxylase deficiency","type":"related"},{"name":"deficiency of methylcrotonoyl-Coa carboxylase","type":"related"},{"name":"methylcrotonoyl-CoA carboxylase 1 deficiency","type":"related"},{"name":"methylcrotonylglycinuria type 1","type":"related"},{"name":"methylcrotonylglycinuria type I","type":"related"}],"termid":"MONDO:0008861","xrefs":{"Monarch":{"xref_id":"0008861"}}}


id: GO:0043721
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybutanoyl-CoA = vinylacetyl-CoA + H2O.","definition_xrefs":["EC:4.2.1.120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-hydroxybutanoyl-CoA dehydratase activity","secondary_identifiers":["RHEA:26530","KEGG_REACTION:R05337","MetaCyc:RXN-8890"],"synonyms":[{"name":"4-hydroxybutanoyl-CoA hydro-lyase","type":"exact"},{"name":"4-hydroxybutyryl-CoA dehydratase activity","type":"exact"},{"name":"gamma-hydroxybutanoyl-CoA dehydratase activity","type":"exact"},{"name":"gamma-hydroxybutyryl-CoA dehydratase activity","type":"exact"}],"termid":"GO:0043721"}


id: PBO:0081193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zic family member 5","termid":"PBO:0081193"}


id: GO:1904072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a presynaptic active zone into its constituent components.","definition_xrefs":["GOC:pr","ISBN:9780387325606","GOC:TermGenie","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"},{"relation_name":"is_a","term_name":"presynaptic active zone organization","termid":"GO:1990709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"presynaptic active zone disassembly","synonyms":[{"name":"pre-synaptic active zone component disassembly","type":"narrow"},{"name":"pre-synaptic active zone disassembly","type":"exact"}],"termid":"GO:1904072"}


id: PBO:0000962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beclin family protein, involved in autophagy","termid":"PBO:0000962"}


id: MONDO:0011731
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glucose-galactose malabsorption (GGM) is a very rare, potentially lethal, genetic metabolic disease characterized by impaired glucose-galactose absorption resulting in severe watery diarrhea and dehydration with onset inthe neonatal period.","definition_xrefs":["Orphanet:35710"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"is_a","term_name":"glucose transport disorder","termid":"MONDO:0019226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0004335"],"is_obsolete":false,"name":"glucose-galactose malabsorption","secondary_identifiers":["ICD9:271.3","MedDRA:10066388","icd11.foundation:2108415931","DOID:0070563","NORD:1190","MEDGEN:78647","UMLS:C0268186","GARD:6521","MESH:C562602","NANDO:2200909","SCTID:190749000","OMIM:606824"],"synonyms":[{"name":"Complex carbohydrate intolerance","type":"related"},{"name":"GGM","type":"related"},{"name":"SGLT1 deficiency","type":"exact"},{"name":"carbohydrate intolerance of glucose galactose","type":"related"},{"name":"glucose galactose malabsorption deficiency","type":"related"},{"name":"glucose-galactose malabsorption","type":"exact"},{"name":"glucose/galactose malabsorption","type":"related"},{"name":"monosaccharide malabsorption","type":"related"}],"termid":"MONDO:0011731","xrefs":{"Monarch":{"xref_id":"0011731"}}}


id: PBO:0049864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HELLP associated long non-coding RNA","termid":"PBO:0049864"}


id: PBO:0000040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symbol","termid":"PBO:0000040"}


id: MONDO:1011213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Coloboma that occurs in chicken.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"coloboma, non-human animal","termid":"MONDO:1010319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coloboma, chicken","secondary_identifiers":["OMIA:000219-9031"],"termid":"MONDO:1011213","xrefs":{"Monarch":{"xref_id":"1011213"}}}


id: PBO:0011983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"simialr to S. pombe SPBC12C2.03c (paralog)","termid":"PBO:0011983"}


id: PBO:0060612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurochondrin","termid":"PBO:0060612"}


id: CHEBI:29101
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium(1+)","termid":"CHEBI:29101"}


id: GO:0070840
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a dynein complex, a protein complex that contains two or three dynein heavy chains and several light chains, and has microtubule motor activity.","definition_xrefs":["GOC:mah","GOC:bf","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"dynein complex binding","secondary_identifiers":["GO:0045502"],"synonyms":[{"name":"dynein binding","type":"related"}],"termid":"GO:0070840"}


id: MONDO:0015776
data:
  {"annotated_genes":["SJAG_00326","SJAG_00702"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008972"},{"annotations":[85378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014743"}]},"cv_name":"mondo","definition":"Rhizomelic chondrodysplasia is a form chondrodysplasia punctata, a group of diseases in which the common characteristic is calcifications near joints at birth.","definition_xrefs":["Orphanet:177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"disorder of plasmalogens biosynthesis","termid":"MONDO:0017986"},{"relation_name":"is_a","term_name":"chondrodysplasia punctata","termid":"MONDO:0019701"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0002525","MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"rhizomelic chondrodysplasia punctata","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C85047","GARD:13160","UMLS:C0282529","MESH:D018902","MEDGEN:79471","icd11.foundation:260357080","SCTID:56692003","OMIMPS:215100","DOID:2580","ICD10CM:E71.540"],"synonyms":[{"name":"RCDP","type":"exact"},{"name":"chondrodysplasia punctata, rhizomelic form","type":"exact"},{"name":"rhizomelic chondrodysplasia punctata","type":"exact"},{"name":"rhizomelic chondrodysplasia punctata syndrome","type":"exact"},{"name":"rhizomelic dwarfism","type":"exact"}],"termid":"MONDO:0015776","terms_by_termid":{"MONDO:0008972":null,"MONDO:0014743":null},"xrefs":{"Monarch":{"xref_id":"0015776"}}}


id: PR:P40847
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sap1 gene.","definition_xrefs":["UniProtKB:P40847","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"switch-activating protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.02c","synonyms":[{"name":"Spom972h-sap1","type":"exact"}],"termid":"PR:P40847"}


id: MONDO:0054780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary elliptocytosis","termid":"MONDO:0017319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"elliptocytosis 3","secondary_identifiers":["OMIM:617948","MESH:C566678","UMLS:C1866810","GARD:16273","MEDGEN:357139"],"synonyms":[{"name":"EL3","type":"related"},{"name":"anemia, neonatal hemolytic, fatal or near-fatal","type":"exact"},{"name":"anemia, perinatal hemolytic, fatal or near-fatal","type":"related"},{"name":"elliptocytosis 3","type":"exact"},{"name":"elliptocytosis-3","type":"exact"}],"termid":"MONDO:0054780","xrefs":{"Monarch":{"xref_id":"0054780"}}}


id: MONDO:0001633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blockage of the central retinal artery.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal artery occlusion","termid":"MONDO:0006948"},{"relation_name":"is_a","term_name":"arterial occlusion","termid":"MONDO:0020673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"central retinal artery occlusion","secondary_identifiers":["DOID:13098","NCIT:C34456","MEDGEN:40177","Orphanet:648684","UMLS:C0007688","icd11.foundation:613330234","ICD9:362.31","SCTID:38742007","ICD10CM:H34.1"],"synonyms":[{"name":"central retinal arterial occlusion","type":"exact"}],"termid":"MONDO:0001633","xrefs":{"Monarch":{"xref_id":"0001633"}}}


id: PATO:0001332
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphology quality inhering in a bearer by virtue of the bearer's lack of distinct morphology.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphology","termid":"PATO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amorphous","termid":"PATO:0001332"}


id: GO:0050355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + inorganic triphosphate = diphosphate + phosphate.","definition_xrefs":["EC:3.6.1.25","RHEA:14157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"inorganic triphosphate phosphatase activity","secondary_identifiers":["KEGG_REACTION:R00138","MetaCyc:TRIPHOSPHATASE-RXN"],"synonyms":[{"name":"inorganic triphosphatase activity","type":"related"},{"name":"triphosphatase activity","type":"broad"},{"name":"triphosphate phosphohydrolase activity","type":"related"},{"name":"tripolyphosphatase activity","type":"exact"}],"termid":"GO:0050355"}


id: GO:0042597
data:
  {"annotated_genes":["SJAG_02093","SJAG_01970","SJAG_04067"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102476],"is_not":false,"summary":null,"term":"GO:0042597"},{"annotations":[109934,112824,109933,112823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030287"}]},"cv_name":"cellular_component","definition":"The region between the inner (cytoplasmic) and outer membrane (Gram-negative Bacteria) or cytoplasmic membrane and cell wall (Fungi and Gram-positive Bacteria).","definition_xrefs":["GOC:go_curators","GOC:md"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01970":null,"SJAG_02093":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"periplasmic space","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0005620"],"synonyms":[{"name":"periplasm","type":"exact"}],"termid":"GO:0042597","terms_by_termid":{"GO:0030287":null,"GO:0042597":null}}


id: GO:0004014
data:
  {"annotated_genes":["SJAG_03632"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112868],"is_not":false,"summary":null,"term":"GO:0004014"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + H+ = S-adenosylmethioninamine + CO2.","definition_xrefs":["EC:4.1.1.50","RHEA:15981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03632":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"adenosylmethionine decarboxylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-351222","KEGG_REACTION:R00178","MetaCyc:SAMDECARB-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine carboxy-lyase [(5-deoxy-5-adenosyl)(3-aminopropyl)-methylsulfonium-salt-forming]","type":"related"},{"name":"S-adenosyl-L-methionine carboxy-lyase activity","type":"related"},{"name":"S-adenosyl-L-methionine decarboxylase activity","type":"related"},{"name":"S-adenosylmethionine decarboxylase activity","type":"related"},{"name":"adenosyl methionine decarboxylase activity","type":"exact"}],"termid":"GO:0004014","terms_by_termid":{"GO:0004014":null}}


id: MONDO:0016516
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic condition characterized by long bone sclerosis and thickening, short stature, and head and eye anomalies. Many affected individuals have hypoparathyroidism with hypocalcemia.","definition_xrefs":["NCIT:C130991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kenny-Caffey syndrome","secondary_identifiers":["Orphanet:2333","SCTID:82837002","NORD:1325","OMIMPS:127000","MESH:C537020","GARD:16594","ICD9:759.89","MEDGEN:75560","UMLS:C0265291","DOID:0080724"],"synonyms":[{"name":"Kenny syndrome","type":"exact"}],"termid":"MONDO:0016516","xrefs":{"Monarch":{"xref_id":"0016516"}}}


id: PBO:0011133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydropteroatesynthase/2-amino-4-hydroxy-6-hydro xymethyldihydropteridinediphosphokinase/dihydroneopterin aldolase (predicted)","termid":"PBO:0011133"}


id: SO:2000061
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence referred to by an entry in a databank such as GenBank or SwissProt.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent","termid":"SO:0000695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"databank_entry","synonyms":[{"name":"accession","type":"related"},{"name":"databank entry","type":"exact"}],"termid":"SO:2000061"}


id: PATO:0002354
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of an physical object that is currently realizing one of its functions.","definition_xrefs":["PATOC:RH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activation quality","termid":"PATO:0002353"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"active","termid":"PATO:0002354"}


id: FYPO:0005217
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a proteasome to the nuclear periphery is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nuclear periphery","termid":"FYPO:0002338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"increased proteasome localization to nuclear periphery","synonyms":[{"name":"increased proteasome localisation to nuclear periphery","type":"related"},{"name":"increased proteasome localization to nuclear periphery during mitotic cell cycle","type":"related"},{"name":"increased proteasome localization to nuclear periphery during vegetative growth","type":"exact"}],"termid":"FYPO:0005217"}


id: GO:0071329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sucrose stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to sucrose","termid":"GO:0009744"},{"relation_name":"is_a","term_name":"cellular response to disaccharide stimulus","termid":"GO:0071324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sucrose stimulus","termid":"GO:0071329"}


id: PBO:0049647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 1","termid":"PBO:0049647"}


id: PBO:0050883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDNK gluconokinase","termid":"PBO:0050883"}


id: GO:0047163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dichloroaniline + malonyl-CoA = N-(3,4-dichlorophenyl)malonamate + CoA.","definition_xrefs":["EC:2.3.1.114","RHEA:21060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-malonyltransferase activity","termid":"GO:0050735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3,4-dichloroaniline N-malonyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.114-RXN","KEGG_REACTION:R04050"],"synonyms":[{"name":"malonyl-CoA:3,4-dichloroaniline N-malonyltransferase activity","type":"related"}],"termid":"GO:0047163"}


id: PBO:0053740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 965","termid":"PBO:0053740"}


id: PBO:0060710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 7","termid":"PBO:0060710"}


id: PBO:0048234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 2E","termid":"PBO:0048234"}


id: GO:0006049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of UDP-N-acetylglucosamine, a substance composed of N-acetylglucosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-N-acetylglucosamine metabolic process","termid":"GO:0006047"},{"relation_name":"is_a","term_name":"nucleotide-sugar catabolic process","termid":"GO:0009227"},{"relation_name":"is_a","term_name":"amino sugar catabolic process","termid":"GO:0046348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine catabolic process","synonyms":[{"name":"UDP-N-acetylglucosamine breakdown","type":"exact"},{"name":"UDP-N-acetylglucosamine catabolism","type":"exact"},{"name":"UDP-N-acetylglucosamine degradation","type":"exact"}],"termid":"GO:0006049"}


id: _global:precedes
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"x precedes y if and only if the time point at which x ends is before or equivalent to the time point at which y starts. Formally: x precedes y iff ω(x) <= α(y), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point.","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"_global:temporally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"precedes","secondary_identifiers":["BFO:0000063"],"termid":"_global:precedes"}


id: SOFP:citation
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citation","termid":"SOFP:citation"}


id: MONDO:0016805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete isolated oxidative phosphorylation complex disorder (obsolete MONDO:0016805)","secondary_identifiers":["Orphanet:254846"],"synonyms":[{"name":"isolated respiratory chain complex disorder","type":"exact"}],"termid":"MONDO:0016805","xrefs":{"Monarch":{"xref_id":"0016805"}}}


id: FYECO:0000383
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cells are grown in a culture, and wild-type cells of the opposite mating type are added to the culture.","definition_xrefs":["PomBase:mah","PMID:30279276","PomBase:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wild type cells of opposite mating type added to culture","synonyms":[{"name":"mating with WT","type":"related"}],"termid":"FYECO:0000383"}


id: PBO:0034100
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-genetically_interacts_with","termid":"PBO:0034100"}


id: GO:1902686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which the mitochondrial outer membrane becomes permeable to the passing of proteins and other molecules from the intermembrane space to the cytosol as part of a programmed cell death process.","definition_xrefs":["PMID:20151314","GOC:mtg_apoptosis","GOC:TermGenie","GO_REF:0000060","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitochondrial membrane permeability","termid":"GO:0035794"},{"relation_name":"part_of","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007005","GO:0008150","GO:0061024","GO:0006810"],"is_obsolete":false,"name":"mitochondrial outer membrane permeabilization involved in programmed cell death","synonyms":[{"name":"MPT involved in PCD","type":"narrow"},{"name":"MPT involved in caspase-independent apoptosis","type":"related"},{"name":"MPT involved in caspase-independent cell death","type":"narrow"},{"name":"MPT involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"MPT involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"MPT involved in programmed cell death","type":"narrow"},{"name":"MPT involved in regulated cell death","type":"related"},{"name":"mitochondrial membrane permeability transition involved in PCD","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in caspase-independent apoptosis","type":"related"},{"name":"mitochondrial membrane permeability transition involved in caspase-independent cell death","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in regulated cell death","type":"related"},{"name":"mitochondrial membrane permeabilization involved in PCD","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in caspase-independent apoptosis","type":"related"},{"name":"mitochondrial membrane permeabilization involved in caspase-independent cell death","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in regulated cell death","type":"related"},{"name":"mitochondrial outer membrane permeabilization during programmed cell death","type":"exact"},{"name":"mitochondrial permeability transition involved in PCD","type":"narrow"},{"name":"mitochondrial permeability transition involved in caspase-independent apoptosis","type":"related"},{"name":"mitochondrial permeability transition involved in caspase-independent cell death","type":"narrow"},{"name":"mitochondrial permeability transition involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial permeability transition involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial permeability transition involved in programmed cell death","type":"narrow"},{"name":"mitochondrial permeability transition involved in regulated cell death","type":"related"},{"name":"mitochondrion outer membrane permeabilization involved in programmed cell death","type":"exact"},{"name":"positive regulation of mitochondrial membrane permeability involved in PCD","type":"exact"},{"name":"positive regulation of mitochondrial membrane permeability involved in caspase-independent apoptosis","type":"related"},{"name":"positive regulation of mitochondrial membrane permeability involved in caspase-independent cell death","type":"narrow"},{"name":"positive regulation of mitochondrial membrane permeability involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"positive regulation of mitochondrial membrane permeability involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"positive regulation of mitochondrial membrane permeability involved in programmed cell death","type":"exact"},{"name":"positive regulation of mitochondrial membrane permeability involved in regulated cell death","type":"related"},{"name":"positive regulation of transport across mitochondrial membrane involved in PCD","type":"exact"},{"name":"positive regulation of transport across mitochondrial membrane involved in caspase-independent apoptosis","type":"related"},{"name":"positive regulation of transport across mitochondrial membrane involved in caspase-independent cell death","type":"narrow"},{"name":"positive regulation of transport across mitochondrial membrane involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"positive regulation of transport across mitochondrial membrane involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"positive regulation of transport across mitochondrial membrane involved in programmed cell death","type":"exact"},{"name":"positive regulation of transport across mitochondrial membrane involved in regulated cell death","type":"related"}],"termid":"GO:1902686"}


id: GO:0045635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of melanocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of melanocyte differentiation","termid":"GO:0045634"},{"relation_name":"is_a","term_name":"negative regulation of pigment cell differentiation","termid":"GO:0050941"},{"relation_name":"negatively_regulates","term_name":"melanocyte differentiation","termid":"GO:0030318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of melanocyte differentiation","synonyms":[{"name":"down regulation of melanocyte differentiation","type":"exact"},{"name":"down-regulation of melanocyte differentiation","type":"exact"},{"name":"downregulation of melanocyte differentiation","type":"exact"},{"name":"inhibition of melanocyte differentiation","type":"narrow"},{"name":"negative regulation of melanophore differentiation","type":"exact"}],"termid":"GO:0045635"}


id: FYPO:0005790
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is curved along the long axis to form a \\\"J\\\" shape. In a curved cell, the long axis follows a smooth bend rather than a straight line. In a J-shaped cell, the curve is centered away from the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved vegetative cell","termid":"FYPO:0000016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"J-shaped vegetative cell","synonyms":[{"name":"J-shaped cell","type":"exact"},{"name":"J-shaped cell during vegetative growth","type":"exact"},{"name":"J-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"cell morphology, J-shaped","type":"exact"}],"termid":"FYPO:0005790"}


id: PBO:0063019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenylalanine hydroxylase","termid":"PBO:0063019"}


id: GO:1990147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a talin, a family of related cytoskeletal proteins that play a role in assembly of actin filaments and migration of various cell types.","definition_xrefs":["PMID:23372168","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0008092","GO:0003674"],"is_obsolete":false,"name":"talin binding","termid":"GO:1990147"}


id: GO:0015752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-ribose is transported across a lipid bilayer, from one side of a membrane to the other. As beta-D-ribofuranose, D-ribose forms the glycose group of all ribonucleosides, ribonucleotides and ribonucleic acids, and also of ribose phosphates, various glycosides, some coenzymes and some forms of vitamin B12.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose transmembrane transport","termid":"GO:0015750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"D-ribose transmembrane transport","synonyms":[{"name":"D-ribose transport","type":"related"}],"termid":"GO:0015752"}


id: MONDO:0009240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Formiminoglutamic aciduria, in its moderate form and in the absence of histidine administration, is characterized by mild developmental delay and elevated concentrations of formiminoglutamate (FIGLU) in the urine. A more severe phenotype has been described in five members of a Japanese family and included severe intellectual deficit, psychomotor retardation and megaloblastic anemia.","definition_xrefs":["Orphanet:51208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megaloblastic anemia","termid":"MONDO:0001700"},{"relation_name":"is_a","term_name":"inherited deficiency anemia","termid":"MONDO:0016624"},{"relation_name":"is_a","term_name":"disorder of folate metabolism and transport","termid":"MONDO:0017313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005066","MONDO:0002280"],"is_obsolete":false,"name":"formiminoglutamic aciduria","secondary_identifiers":["DOID:0111679","ICD9:270.8","GARD:9279","SCTID:59761008","MESH:C537425","MEDGEN:82823","OMIM:229100","icd11.foundation:664824338","UMLS:C0268609"],"synonyms":[{"name":"Arakawa syndrome 1","type":"related"},{"name":"FTCD deficiency","type":"exact"},{"name":"Figlu-Uria","type":"related"},{"name":"Formiminoglutamicaciduria (FIGLU-Uria)","type":"related"},{"name":"formiminoglutamic acidemia","type":"related"},{"name":"formiminoglutamic aciduria","type":"exact"},{"name":"formiminotransferase cyclodeaminase deficiency","type":"exact"},{"name":"formiminotransferase deficiency","type":"related"},{"name":"formiminotransferase deficiency syndrome","type":"related"},{"name":"glutamate formiminotransferase deficiency","type":"exact"}],"termid":"MONDO:0009240","xrefs":{"Monarch":{"xref_id":"0009240"}}}


id: PBO:0077826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 target 3 family member E","termid":"PBO:0077826"}


id: PBO:0079638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q2 pseudogene 9","termid":"PBO:0079638"}


id: PBO:0045847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 37","termid":"PBO:0045847"}


id: PBO:0047484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferredoxin 1","termid":"PBO:0047484"}


id: PBO:0044270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine ligand 10","termid":"PBO:0044270"}


id: MONDO:0019807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesocardia","secondary_identifiers":["icd11.foundation:1251061251","HP:0011599","ICD9:746.87","Orphanet:95443","MEDGEN:488817","GARD:19259","UMLS:C0265865","SCTID:16567006"],"synonyms":[{"name":"Midline heart","type":"exact"},{"name":"mesocardia","type":"exact"},{"name":"mesocardia (disease)","type":"exact"}],"termid":"MONDO:0019807","xrefs":{"Monarch":{"xref_id":"0019807"}}}


id: PBO:0038472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 10","termid":"PBO:0038472"}


id: GO:0106026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of misacylated Gly-tRNA(Ala).","definition_xrefs":["PMID:28362257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA editing activity","termid":"GO:0002161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0140101","GO:0016787","GO:0140098","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"Gly-tRNA(Ala) hydrolase activity","termid":"GO:0106026"}


id: PBO:0034290
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_target_end_location","termid":"PBO:0034290"}


id: PBO:0113405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of the cyclic AMP-dependent protein kinase (PKA); PKA is a component of a signaling pathway that controls a variety of cellular processes, including metabolism, cell cycle, stress response, stationary phase, and sporulation; regulator of meiotic commitment","termid":"PBO:0113405"}


id: PBO:0039035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 12, pseudogene","termid":"PBO:0039035"}


id: GO:0009664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in the assembly and arrangement of constituent parts of the cellulose and pectin-containing cell wall, or in the disassembly of the cellulose and pectin-containing cell wall. This process is carried out at the cellular level. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall organization","termid":"GO:0071555"},{"relation_name":"is_a","term_name":"plant-type cell wall organization or biogenesis","termid":"GO:0071669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"plant-type cell wall organization","synonyms":[{"name":"cell wall organization and biogenesis","type":"narrow"},{"name":"cellulose and pectin-containing cell wall organization and biogenesis","type":"related"},{"name":"plant-type cell wall organisation","type":"exact"},{"name":"plant-type cell wall organization and biogenesis","type":"related"}],"termid":"GO:0009664"}


id: MONDO:0016573
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute fatty liver of pregnancy is a rare but severe complication occurring in the third trimester of pregnancy or in early postpartum period bearing a risk for perinatal and maternal mortality and characterized by jaundice, rise of hepatic injuries and evolving to acute liver failure and encephalopathy.","definition_xrefs":["Orphanet:243367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"},{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute fatty liver of pregnancy","secondary_identifiers":["UMLS:C1455728","MESH:C537957","icd11.foundation:1226221530","SCTID:716379000","MEDGEN:264102","MedDRA:10000746","GARD:9578"],"synonyms":[{"name":"AFLP","type":"exact"},{"name":"acute fatty liver, gestational","type":"related"}],"termid":"MONDO:0016573","xrefs":{"Monarch":{"xref_id":"0016573"}}}


id: MONDO:0016271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A adenoid cystic carcinoma that involves the body of uterus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoid cystic carcinoma","termid":"MONDO:0004971"},{"relation_name":"is_a","term_name":"uterine carcinoma","termid":"MONDO:0005213"},{"relation_name":"is_a","term_name":"uterine corpus cancer","termid":"MONDO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adenoid cystic carcinoma of the corpus uteri","secondary_identifiers":["icd11.foundation:350868040","Orphanet:213741"],"synonyms":[{"name":"body of uterus adenoid cystic carcinoma","type":"exact"},{"name":"endometrial adenoid cystic carcinoma","type":"exact"}],"termid":"MONDO:0016271","xrefs":{"Monarch":{"xref_id":"0016271"}}}


id: PBO:0060573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 9","termid":"PBO:0060573"}


id: PBO:0051874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISM1 antisense RNA 1","termid":"PBO:0051874"}


id: MONDO:0007874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Langer-Giedon syndrome, also known as trichorhinophalangeal syndrome type 2, is a very rare, genetic, multiple congenital anomaly disorder characterized by bone abnormalities, distinctive facial features, multiple exostoses, and intellectual disability.","definition_xrefs":["Orphanet:502"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 8","termid":"MONDO:0016907"},{"relation_name":"is_a","term_name":"trichorhinophalangeal syndrome","termid":"MONDO:0017951"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"trichorhinophalangeal syndrome type II","secondary_identifiers":["MESH:D015826","ICD9:759.89","SCTID:41069008","MedDRA:10050638","MEDGEN:6009","icd11.foundation:315453775","NCIT:C75118","NORD:1788","OMIM:150230","UMLS:C0023003","DOID:4998","GARD:7801"],"synonyms":[{"name":"Giedion-Langer syndrome","type":"related"},{"name":"Langer Giedion syndrome","type":"related"},{"name":"Langer-Giedion syndrome","type":"exact"},{"name":"TRPS 2","type":"related"},{"name":"TRPS2","type":"related"},{"name":"chromosome 8Q24.1 deletion syndrome","type":"related"},{"name":"deletion 8q24.1","type":"exact"},{"name":"monosomy 8q24.1","type":"exact"},{"name":"trichorhinophalangeal dysplasia type II","type":"exact"},{"name":"trichorhinophalangeal syndrome type 2","type":"exact"},{"name":"trichorhinophalangeal syndrome, type 2","type":"related"},{"name":"trichorhinophalangeal syndrome, type II","type":"related"}],"termid":"MONDO:0007874","xrefs":{"Monarch":{"xref_id":"0007874"}}}


id: MONDO:0030116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Silver-Russell syndrome","termid":"MONDO:0008394"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silver-russell syndrome 2","secondary_identifiers":["MEDGEN:1714148","OMIM:618905","UMLS:C5394446"],"synonyms":[{"name":"SILVER-RUSSELL SYNDROME 2","type":"exact"},{"name":"SRS2","type":"exact"},{"name":"Uniparental Disomy, Maternal, Chromosome 7","type":"exact"},{"name":"silver-russell syndrome 2","type":"exact"}],"termid":"MONDO:0030116","xrefs":{"Monarch":{"xref_id":"0030116"}}}


id: PBO:0086175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for the negative regulation by ammonia of Gap1p; Gap1p is a general amino acid permease","termid":"PBO:0086175"}


id: PBO:0000617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ type DNA helicase Rqh1","termid":"PBO:0000617"}


id: GO:0050465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-(hydroxyamino)quinoline N-oxide + 2 NAD(P)+ + H2O = 4-nitroquinoline N-oxide + 2 NAD(P)H + 2 H+.","definition_xrefs":["MetaCyc:1.7.1.9-RXN","EC:1.7.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","termid":"GO:0046857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"nitroquinoline-N-oxide reductase activity","synonyms":[{"name":"4-(hydroxyamino)quinoline N-oxide:NADP+ oxidoreductase activity","type":"related"},{"name":"4-nitroquinoline 1-oxide reductase activity","type":"related"},{"name":"4NQO reductase activity","type":"related"},{"name":"NAD(P)H2:4-nitroquinoline-N-oxide oxidoreductase activity","type":"related"},{"name":"NAD(P)H:4-nitroquinoline-N-oxide oxidoreductase activity","type":"related"}],"termid":"GO:0050465"}


id: PBO:0060242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin binding protein H like","termid":"PBO:0060242"}


id: MONDO:0008688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"WT limb-blood syndrome is characterized by hematological anomalies (Fanconi anemia, leukemia and lymphoma) often appearing during childhood. Anomalies of the limbs and hands are also present: bifid or hypoplastic thumbs, cutaneous syndactyly, and ulnar and radial defects. The syndrome has been described in several families. Transmission is autosomal dominant.","definition_xrefs":["Orphanet:3466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited aplastic anemia","termid":"MONDO:0001713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"WT limb-blood syndrome","secondary_identifiers":["OMIM:194350","icd11.foundation:1407849410","SCTID:719019000","UMLS:C1327917","GARD:39","MEDGEN:231231","MESH:C536751"],"synonyms":[{"name":"WT limb blood syndrome","type":"related"},{"name":"WT limb-blood syndrome","type":"exact"},{"name":"WTsyndrome","type":"related"},{"name":"radial-ulnar hypoplasia with bone marrow failure and/or leukaemia","type":"related"},{"name":"radial-ulnar hypoplasia with bone marrow failure and/or leukemia","type":"related"}],"termid":"MONDO:0008688","xrefs":{"Monarch":{"xref_id":"0008688"}}}


id: MOD:00851
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a carboxamido group with a carboxyl group labeled with (18)O.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deamidated residue","termid":"MOD:00400"},{"relation_name":"is_a","term_name":"(18)O labeled residue","termid":"MOD:00844"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(18)O labeled deamidated residue","termid":"MOD:00851"}


id: PBO:0042223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin T1","termid":"PBO:0042223"}


id: PBO:0049433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 10","termid":"PBO:0049433"}


id: FYPO:0004455
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007073"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus","termid":"FYPO:0002956"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null},"genotype_count":1,"genotypes_by_uniquename":{"nur1delta":{"display_name":"nur1delta","display_uniquename":"nur1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to nucleus","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01050"],"single_locus_genotype_uniquenames":["nur1delta"],"synonyms":[{"name":"decreased protein localisation to nucleus","type":"exact"},{"name":"reduced protein localization to nucleus","type":"exact"}],"termid":"FYPO:0004455","terms_by_termid":{"FYECO:0000137":null,"FYPO:0007073":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: MONDO:0015638
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign partial epilepsy of infancy with complex partial seizures is a rare infantile epilepsy syndrome characterized by complex partial seizures presenting with motion arrest, decreased responsiveness, staring, automatisms and mild clonic movements, with or without apneas, normal interictal EEG and focal, mostly temporal discharges in ictal EEG. Most often, seizures occur in clusters and have a good response to treatment. Psychomotor development is normal.","definition_xrefs":["Orphanet:166299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign non-familial infantile seizures","termid":"MONDO:0015637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"benign partial epilepsy of infancy with complex partial seizures","secondary_identifiers":["GARD:20072","MEDGEN:1654146","UMLS:C4749347","icd11.foundation:147618459"],"termid":"MONDO:0015638","xrefs":{"Monarch":{"xref_id":"0015638"}}}


id: PBO:0060935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor of activated T cells 4","termid":"PBO:0060935"}


id: PR:O74857
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase III subunit RPC4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13408:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit rpc4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.07","secondary_identifiers":["UniProtKB:O74857"],"synonyms":[{"name":"RNA polymerase III subunit C4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C53 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC18.07","type":"related"},{"name":"Spom972h-POLR3D","type":"exact"},{"name":"rpc4","type":"related"}],"termid":"PR:O74857"}


id: MONDO:1012431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rod dysplasia, non-human animal","termid":"MONDO:1011991"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rod dysplasia, dog","secondary_identifiers":["OMIA:001670-9615"],"termid":"MONDO:1012431","xrefs":{"Monarch":{"xref_id":"1012431"}}}


id: MONDO:0008268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polydactyly-myopia syndrome is an exceedingly rare autosomal dominant developmental anomaly reported in 1986 in nine individuals among four generations of the same family. The syndrome is characterized clinically by four-limb postaxial polydactyly and progressive myopia. There have been no further descriptions in the literature since 1986.","definition_xrefs":["Orphanet:2917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly-myopia syndrome","secondary_identifiers":["SCTID:82639001","MEDGEN:357424","OMIM:174310","MESH:C536331","UMLS:C1868117","GARD:4413","ICD9:625.4"],"synonyms":[{"name":"Czeizel Brooser syndrome","type":"related"},{"name":"Czeizel-Brooser syndrome","type":"exact"},{"name":"PMS","type":"related"},{"name":"polydactyly myopia syndrome","type":"related"},{"name":"polydactyly, postaxial, with progressive myopia","type":"related"},{"name":"polydactyly-myopia syndrome","type":"exact"},{"name":"postaxial polydactyly with progressive myopia","type":"related"},{"name":"postaxial polydactyly-progressive myopia syndrome","type":"related"}],"termid":"MONDO:0008268","xrefs":{"Monarch":{"xref_id":"0008268"}}}


id: PBO:0074731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 89","termid":"PBO:0074731"}


id: GO:0071383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a steroid hormone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"},{"relation_name":"is_a","term_name":"response to steroid hormone","termid":"GO:0048545"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to steroid hormone stimulus","secondary_identifiers":["Reactome:R-HSA-3371497"],"termid":"GO:0071383"}


id: PR:O13620
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein 19 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02862","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple RNA-binding domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP22H7.02c","secondary_identifiers":["UniProtKB:O13620"],"synonyms":[{"name":"Spom972h-RBM19","type":"exact"}],"termid":"PR:O13620"}


id: PBO:0058212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4504","termid":"PBO:0058212"}


id: MONDO:0008768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronal ceroid lipofuscinosis in which the cause of the disease is a mutation in the CLN6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult neuronal ceroid lipofuscinosis","termid":"MONDO:0019260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005066","MONDO:0002525","MONDO:0005559","MONDO:0002561"],"is_obsolete":false,"name":"ceroid lipofuscinosis, neuronal, 6B (Kufs type)","secondary_identifiers":["UMLS:C5561927","OMIM:204300","GARD:6845","MEDGEN:1794137","Orphanet:228340","DOID:0110730"],"synonyms":[{"name":"CLN4A","type":"exact"},{"name":"CLN4A disease","type":"related"},{"name":"CLN6 neuronal ceroid lipofuscinosis","type":"exact"},{"name":"Kuf's disease type A","type":"related"},{"name":"Kuf's disease, autosomal recessive","type":"related"},{"name":"adult neuronal ceroid lipofuscinosis 4A","type":"related"},{"name":"autosomal recessive neuronal ceroid lipofuscinosis 4A","type":"exact"},{"name":"ceroid lipofuscinosis, neuronal, 4A, autosomal recessive","type":"related"},{"name":"neuronal ceroid lipofuscinosis 4A","type":"exact"},{"name":"neuronal ceroid lipofuscinosis caused by mutation in CLN6","type":"exact"},{"name":"neuronal ceroid lipofuscinosis type 4A","type":"exact"}],"termid":"MONDO:0008768","xrefs":{"Monarch":{"xref_id":"0008768"}}}


id: GO:0071087
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha11-beta1 integrin complex bound to a type I collagen.","definition_xrefs":["PMID:10464311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alpha11-beta1 integrin-collagen type I complex","synonyms":[{"name":"ITGA11-ITGB1-COL1A1 complex","type":"narrow"}],"termid":"GO:0071087"}


id: PBO:0001178
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.17","termid":"PBO:0001178"}


id: MONDO:1012291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal hepatitis, non-human animal","termid":"MONDO:1011779"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal hepatitis, dog","secondary_identifiers":["OMIA:001094-9615"],"termid":"MONDO:1012291","xrefs":{"Monarch":{"xref_id":"1012291"}}}


id: PBO:0053933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1232","termid":"PBO:0053933"}


id: PBO:0047497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fem-1 homolog B","termid":"PBO:0047497"}


id: GO:0019395
data:
  {"annotated_genes":["SJAG_00706"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001561"}]},"cv_name":"biological_process","definition":"The removal of one or more electrons from a fatty acid, with or without the concomitant removal of a proton or protons, by reaction with an electron-accepting substance, by addition of oxygen or by removal of hydrogen.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid metabolic process","termid":"GO:0006631"},{"relation_name":"is_a","term_name":"lipid oxidation","termid":"GO:0034440"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00706":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"fatty acid oxidation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019395","terms_by_termid":{"GO:0001561":null}}


id: MONDO:0020447
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronary sinus atresia","secondary_identifiers":["UMLS:C0344683","Orphanet:99118","GARD:19659","MEDGEN:576419"],"termid":"MONDO:0020447","xrefs":{"Monarch":{"xref_id":"0020447"}}}


id: PR:Q9P7F7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A charged multivesicular body protein 4b that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar-sorting protein snf7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1142.07c","secondary_identifiers":["UniProtKB:Q9P7F7"],"synonyms":[{"name":"SPAC1142.07c","type":"related"},{"name":"Spom972h-CHMP4B","type":"exact"},{"name":"vacuolar protein-sorting-associated protein 32 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vps32","type":"related"}],"termid":"PR:Q9P7F7"}


id: GO:0044545
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A histone acetyltransferase complex that catalyzes the acetylation of a histone H4 lysine residues at several positions. In human, it contains the catalytic subunit MOF, NSL1/KIAA1267, NSL2/KANSL2, NSL3/KANSL3, MCRS1, PHF20, OGT1, WDR5 and HCF1.","definition_xrefs":["GOC:lb","PMID:20018852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H4 histone acetyltransferase complex","termid":"GO:1902562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"NSL complex","synonyms":[{"name":"non-specific lethal complex","type":"exact"}],"termid":"GO:0044545"}


id: PBO:0038391
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-assayed_transcript","termid":"PBO:0038391"}


id: PBO:0051812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IRAG1 antisense RNA 1","termid":"PBO:0051812"}


id: PBO:0064770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase like 1 pseudogene 1","termid":"PBO:0064770"}


id: GO:0048461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the flower. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"flower morphogenesis","termid":"GO:0048439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flower structural organization","secondary_identifiers":["GO:0048412"],"synonyms":[{"name":"flower structural organisation","type":"exact"}],"termid":"GO:0048461"}


id: PBO:0002139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Uap56","termid":"PBO:0002139"}


id: SO:0002032
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-coding transcript encoded by sequences adjacent to the ends of the 5' and 3' miR-encoding sequences that abut the loop in precursor miRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small_regulatory_ncRNA","termid":"SO:0000370"},{"relation_name":"part_of","term_name":"pre_miRNA","termid":"SO:0001244"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"moR","synonyms":[{"name":"microRNA-offset RNA","type":"exact"}],"termid":"SO:0002032"}


id: MONDO:0013126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Bartter syndrome, type 4B (obsolete MONDO:0013126)","termid":"MONDO:0013126","xrefs":{"Monarch":{"xref_id":"0013126"}}}


id: GO:1905280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of retrograde transport, endosome to Golgi.","definition_xrefs":["GOC:bf","GOC:TermGenie","GOC:PARL","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of retrograde transport, endosome to Golgi","termid":"GO:1905279"},{"relation_name":"negatively_regulates","term_name":"retrograde transport, endosome to Golgi","termid":"GO:0042147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"negative regulation of retrograde transport, endosome to Golgi","synonyms":[{"name":"down regulation of retrograde (endosome to Golgi) transport","type":"exact"},{"name":"down regulation of retrograde transport, endosome to Golgi","type":"exact"},{"name":"down-regulation of retrograde (endosome to Golgi) transport","type":"exact"},{"name":"down-regulation of retrograde transport, endosome to Golgi","type":"exact"},{"name":"downregulation of retrograde (endosome to Golgi) transport","type":"exact"},{"name":"downregulation of retrograde transport, endosome to Golgi","type":"exact"},{"name":"inhibition of retrograde (endosome to Golgi) transport","type":"narrow"},{"name":"inhibition of retrograde transport, endosome to Golgi","type":"narrow"},{"name":"negative regulation of retrograde (endosome to Golgi) transport","type":"exact"}],"termid":"GO:1905280"}


id: GO:0060683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of salivary gland branching as a result of the transfer of information from the epithelial cells to the mesenchymal cells of the salivary gland.","definition_xrefs":["PMID:18559345","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial-mesenchymal cell signaling","termid":"GO:0060684"},{"relation_name":"is_a","term_name":"regulation of branching involved in salivary gland morphogenesis","termid":"GO:0060693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of branching involved in salivary gland morphogenesis by epithelial-mesenchymal signaling","synonyms":[{"name":"regulation of branching involved in salivary gland morphogenesis by epithelial-mesenchymal signalling","type":"exact"}],"termid":"GO:0060683"}


id: PBO:0061117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLRP7 pseudogene 1","termid":"PBO:0061117"}


id: PBO:0042433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 37 pseudogene 2","termid":"PBO:0042433"}


id: MONDO:0002168
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant soft tissue neoplasm that arises from the rectum. Representative examples include angiosarcoma, Kaposi sarcoma, and leiomyosarcoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoma","termid":"MONDO:0005089"},{"relation_name":"is_a","term_name":"rectal cancer","termid":"MONDO:0006519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"rectum sarcoma","secondary_identifiers":["NCIT:C5548","MEDGEN:277577","DOID:1995","UMLS:C1335688"],"synonyms":[{"name":"rectal sarcoma","type":"exact"},{"name":"rectum sarcoma","type":"exact"},{"name":"sarcoma of rectum","type":"exact"},{"name":"sarcoma of the rectum","type":"exact"}],"termid":"MONDO:0002168","xrefs":{"Monarch":{"xref_id":"0002168"}}}


id: PBO:0085041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential conserved protein with a role in mRNA decapping; specifically affects the function of the decapping enzyme Dcp1p; mediates decay of the RPS28B mRNA via binding to both Rps28Bp (or Rps28Ap) and the RPS28B mRNA; mediates decay of the YRA1 mRNA by a different, translation-independent mechanism; localizes to cytoplasmic mRNA processing bodies; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0085041"}


id: PBO:0080715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WRN RecQ like helicase","termid":"PBO:0080715"}


id: PBO:0091560
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial Morphology and Distribution","termid":"PBO:0091560"}


id: GO:0010920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of inositol phosphate biosynthesis. Inositol phosphate biosynthetic processes are the chemical reactions and pathways resulting in the formation of an inositol phosphate, 1,2,3,4,5,6-cyclohexanehexol, with one or more phosphate groups attached.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inositol phosphate biosynthetic process","termid":"GO:0010919"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of phosphate metabolic process","termid":"GO:0045936"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"},{"relation_name":"negatively_regulates","term_name":"inositol phosphate biosynthetic process","termid":"GO:0032958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of inositol phosphate biosynthetic process","synonyms":[{"name":"negative regulation of inositol phosphate biosynthesis","type":"exact"}],"termid":"GO:0010920"}


id: FYPO:0001560
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-threonine measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular threonine level","secondary_identifiers":["FYPO:0001614"],"synonyms":[{"name":"decreased cellular L-threonine level","type":"exact"},{"name":"decreased cellular threonine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular threonine level during vegetative growth","type":"exact"},{"name":"decreased level of threonine in cell","type":"exact"},{"name":"decreased threonine accumulation","type":"related"},{"name":"reduced cellular threonine level","type":"exact"},{"name":"reduced level of threonine in cell","type":"exact"}],"termid":"FYPO:0001560"}


id: MONDO:1011666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-specific digestive disorder, non-human animal","secondary_identifiers":["OMIA:001768"],"termid":"MONDO:1011666","xrefs":{"Monarch":{"xref_id":"1011666"}}}


id: PR:O74889
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sac3 gene.","definition_xrefs":["UniProtKB:O74889","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAC3 family protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.05","synonyms":[{"name":"Spom972h-sac3","type":"exact"}],"termid":"PR:O74889"}


id: MONDO:0100182
data:
  {"annotated_genes":["SJAG_01903"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010943"}]},"cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing schizophrenia.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01903":null},"genotype_count":0,"is_obsolete":false,"name":"schizophrenia, susceptibility to","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C2675945","MEDGEN:390920"],"termid":"MONDO:0100182","terms_by_termid":{"MONDO:0010943":null},"xrefs":{"Monarch":{"xref_id":"0100182"}}}


id: GO:0043885
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CO + H2O + oxidized ferredoxin = CO2 + reduced ferredoxin.","definition_xrefs":["RHEA:21040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor","termid":"GO:0016625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"anaerobic carbon-monoxide dehydrogenase activity","secondary_identifiers":["MetaCyc:1.2.7.4-RXN","UM-BBD_reactionID:r0652","EC:1.2.7.4"],"synonyms":[{"name":"CO dehydrogenase activity","type":"exact"},{"name":"CO-dehydrogenase (ferredoxin) activity","type":"exact"},{"name":"CO-dehydrogenase activity","type":"exact"},{"name":"CODH","type":"related"},{"name":"carbon monoxide dehydrogenase (ferredoxin) activity","type":"exact"},{"name":"carbon monoxide dehydrogenase activity","type":"broad"},{"name":"carbon-monoxide dehydrogenase (ferredoxin) activity","type":"exact"},{"name":"carbon-monoxide dehydrogenase activity","type":"broad"},{"name":"carbon-monoxide,water:ferredoxin oxidoreductase activity","type":"exact"},{"name":"carbon-monoxide:(acceptor) oxidoreductase activity","type":"exact"}],"termid":"GO:0043885"}


id: PBO:0064295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perilipin 3","termid":"PBO:0064295"}


id: MONDO:0012811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intracranial berry aneurysm","termid":"MONDO:0016483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aneurysm, intracranial berry, 8","secondary_identifiers":["MESH:C567405","OMIM:612162","MEDGEN:393712","DOID:0080971","UMLS:C2677336","GARD:18326"],"synonyms":[{"name":"ANIB8","type":"exact"},{"name":"aneurysm, intracranial BERRY, 8","type":"related"}],"termid":"MONDO:0012811","xrefs":{"Monarch":{"xref_id":"0012811"}}}


id: MONDO:0004355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic leukemia that occurs during childhood.","definition_xrefs":["NCIT:C4989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukemia","termid":"MONDO:0005059"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"childhood leukemia","secondary_identifiers":["UMLS:C1332977","MEDGEN:234132","NANDO:2100002","DOID:7757"],"synonyms":[{"name":"childhood leukaemia (disease)","type":"exact"},{"name":"childhood leukemia","type":"exact"},{"name":"childhood leukemia (disease)","type":"exact"},{"name":"leukaemia","type":"broad"},{"name":"leukaemia (disease) of childhood","type":"exact"},{"name":"leukemia","type":"broad"},{"name":"leukemia (disease) of childhood","type":"exact"},{"name":"paediatric leukaemia (disease)","type":"exact"},{"name":"pediatric leukemia (disease)","type":"exact"}],"termid":"MONDO:0004355","xrefs":{"Monarch":{"xref_id":"0004355"}}}


id: MONDO:0020423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"coronary artery congenital malformation","termid":"MONDO:0015203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stenosis or atrophy of the coronary ostium","secondary_identifiers":["Orphanet:99087","GARD:19643","MEDGEN:1842382","UMLS:C5575847"],"synonyms":[{"name":"coronary ostial stenosis or atresia","type":"exact"},{"name":"stenosis or atresia of the coronary ostium","type":"related"}],"termid":"MONDO:0020423","xrefs":{"Monarch":{"xref_id":"0020423"}}}


id: FYPO:0007863
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the mitotic or meiotic spindle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to spindle","synonyms":[{"name":"abnormal protein localisation to spindle","type":"exact"}],"termid":"FYPO:0007863"}


id: GO:0051098
data:
  {"annotated_genes":["SJAG_03088","SJAG_04887"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94774,104643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904530"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of binding, the selective interaction of a molecule with one or more specific sites on another molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of molecular function","termid":"GO:0065009"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03088":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051098","terms_by_termid":{"GO:1904530":null}}


id: GO:0075186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of symbiont infection cushion formation on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of infection cushion formation","termid":"GO:0075184"},{"relation_name":"negatively_regulates","term_name":"infection cushion formation","termid":"GO:0075183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of infection cushion formation","synonyms":[{"name":"negative regulation of infection cushion formation on or near host","type":"exact"}],"termid":"GO:0075186"}


id: PBO:0055663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and Ig domain containing 1","termid":"PBO:0055663"}


id: GO:0070932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the removal of one or more acetyl groups.","definition_xrefs":["GOC:BHF","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3 deacetylation (obsolete GO:0070932)","termid":"GO:0070932"}


id: FYPO:0003603
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the first meiotic nuclear division is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis","termid":"FYPO:0000051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abnormal meiosis I","synonyms":[{"name":"abnormal first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003603"}


id: MONDO:0022587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone dysplasia corpus callosum agenesis","secondary_identifiers":["GARD:921"],"termid":"MONDO:0022587","xrefs":{"Monarch":{"xref_id":"0022587"}}}


id: GO:0030366
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the conversion of precursor Z to molybdopterin, the final step in molybdopterin biosynthesis.","definition_xrefs":["PMID:18154309","PMID:8514783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016782","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"molybdopterin synthase activity","secondary_identifiers":["Reactome:R-HSA-947541","RHEA:26333","EC:2.8.1.12"],"termid":"GO:0030366"}


id: PR:O94726
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ER degradation-enhancing alpha-mannosidase-like protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11742:SF11","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER degradation-enhancing alpha-mannosidase-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23A1.04c","secondary_identifiers":["UniProtKB:O94726"],"synonyms":[{"name":"SPAC23A1.04c","type":"related"},{"name":"Spom972h-EDEM1","type":"exact"}],"termid":"PR:O94726"}


id: PBO:0049253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRTP1 antisense RNA 1","termid":"PBO:0049253"}


id: MONDO:0009928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pulmonary alveolar microlithiasis is a disorder in which tiny fragments (microliths) of calcium phosphate gradually accumulate in the small air sacs (alveoli) of the lungs. These deposits eventually cause widespread damage to the alveoli and surrounding lung tissue (interstitial lung disease). People with this disorder may also develop a persistent cough and difficulty breathing (dyspnea), especially during physical exertion. Chest pain that worsens when coughing, sneezing, or taking deep breaths is another common feature. People with pulmonary alveolar microlithiasismay also develop calcium phosphate deposits in other organs and tissue of the body. Though the course of the disease can be variable,many casesslowly progress to lung fibrosis, respiratory failure, or cor pulmonale. The only effective therapy is lung transplantation. In some cases, pulmonary alveolar microlithiasis is caused by mutations in the SLC34A2 gene and inherited in an autosomal recessive manner.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary alveolar microlithiasis","secondary_identifiers":["Orphanet:60025","GARD:11894","SCTID:87153008","NANDO:2200202","MedDRA:10037315","MESH:C562405","UMLS:C0155912","icd11.foundation:1220010076","ICD9:516.2","OMIM:265100","MEDGEN:56374","DOID:12117","ICD10CM:J84.02"],"synonyms":[{"name":"pulmonary alveolar microlithiasis","type":"exact"}],"termid":"MONDO:0009928","xrefs":{"Monarch":{"xref_id":"0009928"}}}


id: SOFP:ontology_term
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"A term from some ontology classifying the feature","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ontology_term","termid":"SOFP:ontology_term"}


id: MONDO:0006601
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mild, self-limited skin disorder that is most commonly seen in children and young adults. It is characterized by an initial large round spot on the chest, abdomen, or back, often referred to as a herald patch, that is usually followed within a week by a distinctive pattern of similar but smaller papules on the torso, arms, and legs. There may also be itching, especially when overheated.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"psoriasis","termid":"MONDO:0005083"},{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"exanthem","termid":"MONDO:0006547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pityriasis rosea","secondary_identifiers":["UMLS:C0032026","Wikipedia:Pityriasis_rosea","EFO:1000756","NCIT:C26855","DOID:8892","SCTID:77252004","MESH:D017515","ICD10CM:L42","icd11.foundation:919892859","ICD9:696.3","MEDGEN:18492"],"synonyms":[{"name":"Pityriasis circinata","type":"exact"},{"name":"Pityriasis rosea","type":"exact"}],"termid":"MONDO:0006601","xrefs":{"Monarch":{"xref_id":"0006601"}}}


id: MONDO:0009010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aortic arch interruption is a rare heart defect characterized by complete lack of anatomical continuity between the transverse aortic arch and the descending thoracic aorta. AAI should be distinguished anatomically from atresia of the aortic arch where continuity between these segments is achieved by an imperforate fibrous strand of various lengths.","definition_xrefs":["Orphanet:2299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of the great arteries","termid":"MONDO:0020292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aortic arch interruption","secondary_identifiers":["GARD:740","icd11.foundation:1769930414","NANDO:2200288","MedDRA:10022599","MEDGEN:57773","UMLS:C0152419","ICD9:745.11","ICD10CM:Q25.21"],"termid":"MONDO:0009010","xrefs":{"Monarch":{"xref_id":"0009010"}}}


id: PBO:0062511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily I member 4 pseudogene","termid":"PBO:0062511"}


id: PBO:0084856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; overproduction suppresses mutations in the COX2 leader peptide-encoding region","termid":"PBO:0084856"}


id: MONDO:0007887
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked diffuse leiomyomatosis-Alport syndrome","termid":"MONDO:0010641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"leiomyoma of vulva and esophagus","secondary_identifiers":["MEDGEN:320616","OMIM:150700","GARD:10097","MESH:C537006","UMLS:C1835488"],"synonyms":[{"name":"esophagogastric and vulvar leiomyomatosis","type":"related"},{"name":"leiomyoma of vulva and esophagus","type":"exact"},{"name":"leiomyomatosis, esophagogastric and vulvar","type":"related"}],"termid":"MONDO:0007887","xrefs":{"Monarch":{"xref_id":"0007887"}}}


id: MONDO:1010989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrocephalus that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocephalus, non-human animal","termid":"MONDO:1010233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus, pig","secondary_identifiers":["OMIA:000487-9823"],"termid":"MONDO:1010989","xrefs":{"Monarch":{"xref_id":"1010989"}}}


id: PBO:0044555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartyl-tRNA synthetase 1","termid":"PBO:0044555"}


id: GO:0004527
data:
  {"annotated_genes":["SJAG_04519","SJAG_04171","SJAG_01832","SJAG_01836","SJAG_00966","SJAG_01822","SJAG_02298","SJAG_00814","SJAG_03734","SJAG_01798","SJAG_04818","SJAG_06586","SJAG_01173","SJAG_04767","SJAG_04407","SJAG_16455","SJAG_00377","SJAG_05373","SJAG_05197","SJAG_02658","SJAG_01648","SJAG_04587","SJAG_03276","SJAG_04410","SJAG_05280","SJAG_02540","SJAG_03745","SJAG_02275","SJAG_02818","SJAG_04084","SJAG_02908","SJAG_04369","SJAG_04153","SJAG_00081","SJAG_01163","SJAG_01431","SJAG_00401","SJAG_02993","SJAG_03876","SJAG_04824","SJAG_04006","SJAG_00841","SJAG_03132","SJAG_03994"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94883],"is_not":false,"summary":null,"term":"GO:0004527"},{"annotations":[104427,71400,102329,115855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008408"},{"annotations":[104725,108600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008296"},{"annotations":[102443,107980,98444,95112,115156,103174,116101,106955,101590,103913,110743,89456,91741,104762,107272,114826,117807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000175"},{"annotations":[92481,87870,96616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035312"},{"annotations":[102698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008409"},{"annotations":[89792,94447,90105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004534"},{"annotations":[115181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033699"},{"annotations":[109450,88027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008311"},{"annotations":[96619,107248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051908"},{"annotations":[113928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008859"},{"annotations":[102701,109452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004528"},{"annotations":[107273,92891,115161,112416,116102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004535"},{"annotations":[93211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990838"},{"annotations":[106958,99121,100538,91742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004532"},{"annotations":[88030,100642,106848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008310"},{"annotations":[111080,96621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045145"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end.","definition_xrefs":["GOC:mah","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease activity","termid":"GO:0004518"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00377":null,"SJAG_00401":null,"SJAG_00814":null,"SJAG_00841":null,"SJAG_00966":null,"SJAG_01163":null,"SJAG_01173":null,"SJAG_01431":null,"SJAG_01648":null,"SJAG_01798":null,"SJAG_01822":null,"SJAG_01832":null,"SJAG_01836":null,"SJAG_02275":null,"SJAG_02298":null,"SJAG_02540":null,"SJAG_02658":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_02993":null,"SJAG_03132":null,"SJAG_03276":null,"SJAG_03734":null,"SJAG_03745":null,"SJAG_03876":null,"SJAG_03994":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04171":null,"SJAG_04369":null,"SJAG_04407":null,"SJAG_04410":null,"SJAG_04519":null,"SJAG_04587":null,"SJAG_04767":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_05197":null,"SJAG_05280":null,"SJAG_05373":null,"SJAG_06586":null,"SJAG_16455":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"exonuclease activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0008857"],"synonyms":[{"name":"exonuclease IX activity","type":"narrow"}],"termid":"GO:0004527","terms_by_termid":{"GO:0000175":null,"GO:0004527":null,"GO:0004528":null,"GO:0004532":null,"GO:0004534":null,"GO:0004535":null,"GO:0008296":null,"GO:0008310":null,"GO:0008311":null,"GO:0008408":null,"GO:0008409":null,"GO:0008859":null,"GO:0033699":null,"GO:0035312":null,"GO:0045145":null,"GO:0051908":null,"GO:1990838":null}}


id: GO:1905479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of glutamate-ammonia ligase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:10377385"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of glutamate-ammonia ligase activity (obsolete GO:1905479)","synonyms":[{"name":"down regulation of L-glutamate:ammonia ligase (ADP-forming)","type":"exact"},{"name":"down regulation of L-glutamine synthetase activity","type":"exact"},{"name":"down regulation of glutamate-ammonia ligase activity","type":"exact"},{"name":"down regulation of glutamine synthetase activity","type":"exact"},{"name":"down regulation of glutamylhydroxamic synthetase activity","type":"exact"},{"name":"down-regulation of L-glutamate:ammonia ligase (ADP-forming)","type":"exact"},{"name":"down-regulation of L-glutamine synthetase activity","type":"exact"},{"name":"down-regulation of glutamate-ammonia ligase activity","type":"exact"},{"name":"down-regulation of glutamine synthetase activity","type":"exact"},{"name":"down-regulation of glutamylhydroxamic synthetase activity","type":"exact"},{"name":"downregulation of L-glutamate:ammonia ligase (ADP-forming)","type":"exact"},{"name":"downregulation of L-glutamine synthetase activity","type":"exact"},{"name":"downregulation of glutamate-ammonia ligase activity","type":"exact"},{"name":"downregulation of glutamine synthetase activity","type":"exact"},{"name":"downregulation of glutamylhydroxamic synthetase activity","type":"exact"},{"name":"inhibition of L-glutamate:ammonia ligase (ADP-forming)","type":"narrow"},{"name":"inhibition of L-glutamine synthetase activity","type":"narrow"},{"name":"inhibition of glutamate-ammonia ligase activity","type":"narrow"},{"name":"inhibition of glutamine synthetase activity","type":"narrow"},{"name":"inhibition of glutamylhydroxamic synthetase activity","type":"narrow"},{"name":"negative regulation of L-glutamate:ammonia ligase (ADP-forming)","type":"exact"},{"name":"negative regulation of L-glutamine synthetase activity","type":"exact"},{"name":"negative regulation of glutamine synthetase activity","type":"exact"},{"name":"negative regulation of glutamylhydroxamic synthetase activity","type":"exact"}],"termid":"GO:1905479"}


id: PBO:0084448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannoprotein that exhibits a tight association with the cell wall; required for cell wall stability in the absence of GPI-anchored mannoproteins; has a high serine-threonine content; expression is induced in cell wall mutants; SRL1 has a paralog, SVS1, that arose from the whole genome duplication","termid":"PBO:0084448"}


id: PBO:0056856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIA SH3 domain ER export factor 2","termid":"PBO:0056856"}


id: PBO:0114653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein with ubiquitin-like domain, DUF2420 family, implicated in meiotic recombination, Rmr1","termid":"PBO:0114653"}


id: GO:0001748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the optic placode over time, from its formation to the mature structure. During embryonic stage 12 the placode starts to invaginate, forming a pouch. Cells that will form Bolwig's organ segregate from the ventral lip of this pouch, remaining in the head epidermis. The remainder of the invagination loses contact with the outer surface and becomes the optic lobe. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:8402833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"insect visual primordium development","secondary_identifiers":["GO:0048049"],"synonyms":[{"name":"optic lobe and Bolwig's organ precursor development","type":"exact"},{"name":"optic lobe placode development","type":"exact"},{"name":"optic placode development","type":"broad"}],"termid":"GO:0001748"}


id: GO:0031313
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of an endosome membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"endosome membrane","termid":"GO:0010008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005768","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of endosome membrane","synonyms":[{"name":"extrinsic to endosome membrane","type":"narrow"}],"termid":"GO:0031313"}


id: GO:0021910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened that results in the spatial identity of regions along the dorsal-ventral axis of the spinal cord.","definition_xrefs":["GOC:tb","GOC:dgh","GOC:dph","GOC:cls","GOC:jid","PMID:11262869","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smoothened signaling pathway","termid":"GO:0007224"},{"relation_name":"part_of","term_name":"spinal cord dorsal/ventral patterning","termid":"GO:0021513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"smoothened signaling pathway involved in ventral spinal cord patterning","synonyms":[{"name":"hedgehog signaling pathway involved in ventral spinal cord patterning","type":"exact"},{"name":"hh signaling pathway involved in ventral spinal cord patterning","type":"exact"},{"name":"smoothened signalling pathway in ventral spinal cord patterning","type":"exact"}],"termid":"GO:0021910"}


id: FYPO:0005193
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of torin1 than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002682","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"resistance to torin1","synonyms":[{"name":"resistance to torin 1","type":"exact"},{"name":"resistance to torin1 during mitotic cell cycle","type":"related"},{"name":"resistance to torin1 during vegetative growth","type":"exact"},{"name":"resistant to torin1","type":"exact"}],"termid":"FYPO:0005193"}


id: PBO:0072083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 13","termid":"PBO:0072083"}


id: GO:0046342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of CDP-diacylglycerol, CDP-1,2-diacylglycerol, a substance composed of diacylglycerol in glycosidic linkage with cytidine diphosphate.","definition_xrefs":["PMID:6147353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDP-diacylglycerol metabolic process","termid":"GO:0046341"},{"relation_name":"is_a","term_name":"glycerophospholipid catabolic process","termid":"GO:0046475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"CDP-diacylglycerol catabolic process","synonyms":[{"name":"CDP-diacylglycerol breakdown","type":"exact"},{"name":"CDP-diacylglycerol catabolism","type":"exact"},{"name":"CDP-diacylglycerol degradation","type":"exact"}],"termid":"GO:0046342"}


id: PBO:0029799
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short,_misoriented_actin_cables","termid":"PBO:0029799"}


id: MONDO:0002926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant neoplasm with melanocytic differentiation characterized by the presence of polygonal or spindle shaped clear cells. This sarcoma usually affects the tendons and aponeuroses and is associated with a poor prognosis due to recurrences and metastases.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"clear cell sarcoma","secondary_identifiers":["UMLS:C0206651","EFO:0008498","NANDO:2200062","MESH:D018227","ICD9:171.9","ICDO:9044/3","NCIT:C3745","ONCOTREE:CCS","SCTID:402561003","MEDGEN:104909","DOID:4233"],"synonyms":[{"name":"adult soft part clear cell sarcoma","type":"exact"},{"name":"chordoid sarcoma","type":"exact"},{"name":"clear cell sarcoma (morphologic abnormality)","type":"exact"},{"name":"clear cell sarcoma - not kidney","type":"exact"},{"name":"clear cell sarcoma of soft parts","type":"exact"},{"name":"clear cell sarcoma of soft tissue","type":"exact"},{"name":"clear cell sarcoma/malignant melanoma of soft parts (excluding clear cell sarcoma of the kidney)","type":"exact"},{"name":"malignant melanoma of soft parts","type":"related"},{"name":"malignant melanoma of soft tissues","type":"exact"},{"name":"malignant melanoma of the soft parts","type":"exact"},{"name":"melanoma, malignant, of soft parts","type":"exact"}],"termid":"MONDO:0002926","xrefs":{"Monarch":{"xref_id":"0002926"}}}


id: GO:0097162
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a MADS box domain, a protein domain that encodes the DNA-binding MADS domain. The MADS domain binds to DNA sequences of high similarity to the motif CC[A/T]6GG termed the CArG-box. MADS-domain proteins are generally transcription factors. The length of the MADS-box is in the range of 168 to 180 base pairs.","definition_xrefs":["PMID:18296735","Wikipedia:MADS-box","GOC:yaf","InterPro:IPR002100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"MADS box domain binding","termid":"GO:0097162"}


id: GO:0042802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an identical protein or proteins.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"identical protein binding","synonyms":[{"name":"isoform-specific homophilic binding","type":"exact"},{"name":"protein homopolymerization","type":"related"}],"termid":"GO:0042802"}


id: PBO:0079559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBAC2 antisense RNA 1","termid":"PBO:0079559"}


id: PR:Q9USU1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- efc25 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USU1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras guanine nucleotide exchange factor efc25 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.03","synonyms":[{"name":"Spom972h-efc25","type":"exact"},{"name":"exchange factor cdc25p-like protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USU1"}


id: PBO:0068762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5F small nuclear 7, pseudogene","termid":"PBO:0068762"}


id: PBO:0058082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4300","termid":"PBO:0058082"}


id: PBO:0049600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 3","termid":"PBO:0049600"}


id: PBO:0039603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acidic nuclear phosphoprotein 32 family member C","termid":"PBO:0039603"}


id: PBO:0046640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 21","termid":"PBO:0046640"}


id: PBO:0062315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily A member 2","termid":"PBO:0062315"}


id: GO:0150089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a synapse between a multiple synapse bouton and one or more dendritic spines.","definition_xrefs":["PMID:18501438","PMID:11248111","PMID:11466428","GOC:aruk","PMID:22028887","PMID:7482800","GOC:bc","PMID:10586883","PMID:8366344","PMID:29774619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multiple spine synapse organization","synonyms":[{"name":"multi-synapse organisation","type":"broad"},{"name":"multi-synapse organization","type":"broad"},{"name":"multi-synaptic organisation","type":"broad"},{"name":"multi-synaptic organization","type":"broad"},{"name":"multiple spine synapse organisation","type":"exact"},{"name":"multisynapse organisation","type":"broad"},{"name":"multisynapse organization","type":"broad"},{"name":"multisynaptic organisation","type":"broad"},{"name":"multisynaptic organization","type":"broad"}],"termid":"GO:0150089"}


id: PBO:0004646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA thioesterase (predicted)","termid":"PBO:0004646"}


id: GO:0060854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of the coordinated growth and sprouting of lymph vessels giving rise to the organized lymphatic system.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branching morphogenesis of an epithelial tube","termid":"GO:0048754"},{"relation_name":"part_of","term_name":"lymphangiogenesis","termid":"GO:0001946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branching involved in lymph vessel morphogenesis","synonyms":[{"name":"patterning of lymph vessels","type":"broad"}],"termid":"GO:0060854"}


id: PBO:0046368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleoside triphosphate diphosphohydrolase 4","termid":"PBO:0046368"}


id: MONDO:0002654
data:
  {"annotated_genes":["SJAG_01156","SJAG_02748","SJAG_01419"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86749,84532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011962"},{"annotations":[86610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032747"}]},"cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects the uterine corpus or the cervix. Representative examples of non-neoplastic disorders include endometritis and cervicitis. Representative examples of neoplastic disorders include endometrial carcinoma, carcinosarcoma, and cervical carcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01156":null,"SJAG_01419":null,"SJAG_02748":null},"genotype_count":0,"is_obsolete":false,"name":"uterine disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D014591","NCIT:C26907","DOID:345","SCTID:12337004","ICD9:621.9","ICD9:621.8","MEDGEN:22590","UMLS:C0042131"],"synonyms":[{"name":"disease of uterus","type":"exact"},{"name":"disease or disorder of uterus","type":"exact"},{"name":"disorder of uterus","type":"exact"},{"name":"uterine disease","type":"exact"},{"name":"uterine disorder","type":"exact"},{"name":"uterus disease","type":"exact"},{"name":"uterus disease or disorder","type":"exact"}],"termid":"MONDO:0002654","terms_by_termid":{"MONDO:0011962":null,"MONDO:0032747":null},"xrefs":{"Monarch":{"xref_id":"0002654"}}}


id: GO:0022834
data:
  {"annotated_genes":["SJAG_02322","SJAG_03895"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95471,108862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005227"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a solute by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gated channel activity","termid":"GO:0022836"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02322":null,"SJAG_03895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ligand-gated channel activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0022834","terms_by_termid":{"GO:0005227":null}}


id: MONDO:0013017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hypotrichosis that has material basis in a mutation on chromosome 1p21.1-q21.3.","definition_xrefs":["DOID:0110702","PMID:16185270"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Marie Unna hereditary hypotrichosis","termid":"MONDO:0018631"},{"relation_name":"is_a","term_name":"Marie Unna hereditary hypotrichosis","termid":"MONDO:0018631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis 5","secondary_identifiers":["MESH:C567554","OMIM:612841","UMLS:C2748535","GARD:15585","MEDGEN:440568"],"synonyms":[{"name":"HYPT5","type":"exact"},{"name":"MUHH2","type":"exact"},{"name":"Marie Unna hereditary hypotrichosis 2","type":"exact"},{"name":"Muhh2","type":"exact"},{"name":"hypotrichosis 5","type":"exact"},{"name":"hypotrichosis type 5","type":"exact"},{"name":"hypt5","type":"exact"}],"termid":"MONDO:0013017","xrefs":{"Monarch":{"xref_id":"0013017"}}}


id: GO:0071590
data:
  {"annotated_genes":["SJAG_03096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107991],"is_not":false,"summary":null,"term":"GO:0071590"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinamide riboside, the product of the formation of a glycosidic bond between ribose and nicotinamide.","definition_xrefs":["GOC:mah","PMID:19846558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nicotinamide riboside metabolic process","termid":"GO:0046495"},{"relation_name":"is_a","term_name":"pyridine nucleoside biosynthetic process","termid":"GO:0071589"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"nicotinamide riboside biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"N-ribosylnicotinamide biosynthetic process","type":"exact"},{"name":"nicotinamide riboside anabolism","type":"exact"},{"name":"nicotinamide riboside biosynthesis","type":"exact"},{"name":"nicotinamide riboside formation","type":"exact"},{"name":"nicotinamide riboside synthesis","type":"exact"}],"termid":"GO:0071590","terms_by_termid":{"GO:0071590":null}}


id: GO:0005848
data:
  {"annotated_genes":["SJAG_03853","SJAG_01791","SJAG_02037","SJAG_01412","SJAG_03594","SJAG_04022"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92944,97629,98592,99124,109310,111061],"is_not":false,"summary":null,"term":"GO:0005848"}]},"cv_name":"cellular_component","definition":"A protein complex required for mRNA cleavage but not for poly(A) addition.","definition_xrefs":["GOC:mah","PMID:10357856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA cleavage factor complex","termid":"GO:0005849"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01412":null,"SJAG_01791":null,"SJAG_02037":null,"SJAG_03594":null,"SJAG_03853":null,"SJAG_04022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"mRNA cleavage stimulating factor complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CstF complex","type":"narrow"},{"name":"cleavage stimulation factor activity","type":"related"}],"termid":"GO:0005848","terms_by_termid":{"GO:0005848":null}}


id: MONDO:0008201
data:
  {"annotated_genes":["SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86234],"is_not":false,"summary":null,"term":"MONDO:0008201"}]},"cv_name":"mondo","definition":"Perry syndrome is a rare inherited neurodegenerative disorder characterized by rapidly progressive early-onset parkinsonism, central hypoventilation, weight loss, insomnia and depression.","definition_xrefs":["Orphanet:178509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"parkinsonian disorder","termid":"MONDO:0021095"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02695":null},"genotype_count":0,"is_obsolete":false,"name":"Perry syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1441227658","NANDO:1200547","ICD9:348.89","MESH:C566822","UMLS:C1868594","SCTID:699184009","GARD:10453","MEDGEN:357007","DOID:0060486","OMIM:168605"],"synonyms":[{"name":"Parkinsonism with alveolar hypoventilation and mental depression","type":"exact"},{"name":"Perry syndrome","type":"exact"},{"name":"parkinsonism with alveolar hypoventilation and mental depression","type":"exact"}],"termid":"MONDO:0008201","terms_by_termid":{"MONDO:0008201":null},"xrefs":{"Monarch":{"xref_id":"0008201"}}}


id: MONDO:0011842
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A frontotemporal dementia characterized by variable phenotypic expression typically including social, behavioral, or language deterioration, rather than memory or motor deficits and the presence of TARDBP-positive inclusions that has material basis in mutation in the GRN gene on chromosome 17q21.31.","definition_xrefs":["DOID:0060672","PMID:16862116","PMID:16983677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frontotemporal dementia","termid":"MONDO:0017276"},{"relation_name":"is_a","term_name":"primary progressive aphasia","termid":"MONDO:0019806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"GRN-related frontotemporal lobar degeneration with Tdp43 inclusions","secondary_identifiers":["OMIM:607485","MEDGEN:375285","UMLS:C1843792"],"synonyms":[{"name":"FTLD-TDP, GRN-related","type":"related"},{"name":"aphasia, primary progressive","type":"related"},{"name":"dementia, hereditary dysphasic disinhibition","type":"related"},{"name":"frontotemporal dementia with TDP43 inclusions, GRN-related","type":"related"},{"name":"frontotemporal dementia, ubiquitin-positive","type":"related"},{"name":"frontotemporal lobar degeneration with TDP43 inclusions, GRN-related","type":"related"},{"name":"frontotemporal lobar degeneration with ubiquitin-positive inclusions","type":"related"}],"termid":"MONDO:0011842","xrefs":{"Monarch":{"xref_id":"0011842"}}}


id: MOD:00548
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:195","PubMed:15283597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APTA-d0","synonyms":[{"name":"APTA-d0","type":"related"},{"name":"QAT","type":"related"}],"termid":"MOD:00548"}


id: GO:1904856
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any cytoplasmic membrane-bounded vesicle lumen that is part of a cytolytic granule.","definition_xrefs":["PMID:17272266","GO_REF:0000064","GOC:TermGenie","PMID:21247065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar lumen","termid":"GO:0005775"},{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"cytolytic granule","termid":"GO:0044194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005773","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"cytolytic granule lumen","synonyms":[{"name":"cytolytic granule cytoplasmic membrane-bounded vesicle lumen","type":"exact"},{"name":"cytoplasmic membrane-bounded vesicle lumen of cytolytic granule","type":"exact"},{"name":"cytoplasmic membrane-enclosed vesicle lumen of cytolytic granule","type":"exact"}],"termid":"GO:1904856"}


id: PBO:0061779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OCIA domain containing 1","termid":"PBO:0061779"}


id: PBO:0071526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 29","termid":"PBO:0071526"}


id: GO:0061364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The apoptotic process that contributes to luteolysis.","definition_xrefs":["PMID:18566128","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in development","termid":"GO:1902742"},{"relation_name":"part_of","term_name":"luteolysis","termid":"GO:0001554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in luteolysis","synonyms":[{"name":"apoptosis involved in luteolysis","type":"narrow"},{"name":"structural luteolysis","type":"exact"}],"termid":"GO:0061364"}


id: GO:0018764
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-isopropylammelide + H2O = cyanuric acid + isopropylamine.","definition_xrefs":["EC:3.5.4.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"N-isopropylammelide isopropylaminohydrolase activity","secondary_identifiers":["UM-BBD_enzymeID:r0115","MetaCyc:R123-RXN","RHEA:23608"],"synonyms":[{"name":"AtzC","type":"related"}],"termid":"GO:0018764"}


id: PBO:0031093
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-small_vacuoles_present_in_increased_numbers_during_vegetative_growth","termid":"PBO:0031093"}


id: PR:Q92340
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- shu1 gene.","definition_xrefs":["UniProtKB:Q92340","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized GPI-anchored protein C1F8.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F8.02c","synonyms":[{"name":"Spom972h-shu1","type":"exact"}],"termid":"PR:Q92340"}


id: PBO:0070779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 9","termid":"PBO:0070779"}


id: PATO:0000851
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000851 absolute auditory threshold (obsolete PATO:0000851)","termid":"PATO:0000851"}


id: FYPO:0001406
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A septation phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a septum that is thicker than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum morphology during vegetative growth","termid":"FYPO:0002023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000032","FYPO:0000002","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"increased septum thickness","synonyms":[{"name":"increased septal material","type":"related"},{"name":"increased septum thickness during mitotic cell cycle","type":"related"},{"name":"increased septum thickness during vegetative growth","type":"exact"},{"name":"thick septum","type":"exact"}],"termid":"FYPO:0001406"}


id: PBO:0065654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type E","termid":"PBO:0065654"}


id: PBO:0076571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3L","termid":"PBO:0076571"}


id: PBO:0029924
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ergosterol_absent_from_cell","termid":"PBO:0029924"}


id: GO:0052111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of an anatomical structure of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disruption of anatomical structure in another organism","termid":"GO:0141060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host anatomical structure","synonyms":[{"name":"cytopathogenic effect","type":"related"},{"name":"disruption by symbiont of host anatomical structure","type":"exact"},{"name":"modification by symbiont of host anatomical structure","type":"exact"},{"name":"modification by symbiont of host structure","type":"related"}],"termid":"GO:0052111"}


id: PBO:0084153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity plasma membrane H+-biotin (vitamin H) symporter; mutation results in fatty acid auxotrophy; 12 transmembrane domain containing major facilitator subfamily member; mRNA levels negatively regulated by iron deprivation and biotin","termid":"PBO:0084153"}


id: GO:0061195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the taste bud from unspecified parts. The taste bud is a specialized area of the tongue that contains taste receptors.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"taste bud morphogenesis","termid":"GO:0061194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"taste bud formation","termid":"GO:0061195"}


id: FYPO:0005910
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to endoplasmic reticulum stress is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"decreased protein level during cellular response to endoplasmic reticulum stress","synonyms":[{"name":"decreased protein accumulation during cellular response to endoplasmic reticulum stress","type":"related"},{"name":"decreased protein level during cellular response to ER stress","type":"exact"},{"name":"decreased protein level during cellular response to endoplasmic reticulum stress during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to endoplasmic reticulum stress during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to endoplasmic reticulum stress","type":"exact"}],"termid":"FYPO:0005910"}


id: PBO:0036073
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_dimethylation_at_centromere_during_vegetative_growth","termid":"PBO:0036073"}


id: PBO:0028651
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rRNA_precursor_level","termid":"PBO:0028651"}


id: GO:0097133
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin D3 and cyclin-dependent kinase 6 (CDK6). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:15935619","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cyclin D3-CDK6 complex","termid":"GO:0097133"}


id: PBO:0086549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YEL008W is not an essential gene; predicted to be involved in metabolism","termid":"PBO:0086549"}


id: MONDO:0859282
data:
  {"annotated_genes":["SJAG_01918"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85216],"is_not":false,"summary":null,"term":"MONDO:0859282"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01918":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with microcephaly, movement abnormalities, and seizures","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620023","UMLS:C5774208","MEDGEN:1823981"],"termid":"MONDO:0859282","terms_by_termid":{"MONDO:0859282":null},"xrefs":{"Monarch":{"xref_id":"0859282"}}}


id: GO:0042762
data:
  {"annotated_genes":["SJAG_01187","SJAG_02380","SJAG_02406","SJAG_03538","SJAG_01402"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110863,114976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[113177,88514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090180"},{"annotations":[98532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010510"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving sulfur, the nonmetallic element sulfur or compounds that contain sulfur.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01187":null,"SJAG_01402":null,"SJAG_02380":null,"SJAG_02406":null,"SJAG_03538":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"regulation of sulfur metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of sulfur metabolism","type":"exact"},{"name":"regulation of sulphur metabolic process","type":"exact"},{"name":"regulation of sulphur metabolism","type":"exact"}],"termid":"GO:0042762","terms_by_termid":{"GO:0010510":null,"GO:0090180":null,"GO:2001211":null}}


id: PBO:0054200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1580","termid":"PBO:0054200"}


id: PBO:0078110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor associated transmembrane adaptor 1","termid":"PBO:0078110"}


id: PBO:0059340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPS9 antisense RNA 2","termid":"PBO:0059340"}


id: GO:0047350
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-phospho-alpha-D-glucuronate + UTP = diphosphate + UDP-alpha-D-glucuronate.","definition_xrefs":["EC:2.7.7.44","RHEA:16325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uridylyltransferase activity","termid":"GO:0070569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016779","GO:0016740"],"is_obsolete":false,"name":"glucuronate-1-phosphate uridylyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01381","MetaCyc:2.7.7.44-RXN"],"synonyms":[{"name":"UDP-D-glucuronic acid pyrophosphorylase activity","type":"related"},{"name":"UDP-glucuronate pyrophosphorylase activity","type":"related"},{"name":"UDP-glucuronic acid pyrophosphorylase activity","type":"related"},{"name":"UTP:1-phospho-alpha-D-glucuronate uridylyltransferase activity","type":"related"},{"name":"UTP:glucuronate-1-phosphate uridylyltransferase activity","type":"exact"},{"name":"uridine diphosphoglucuronic pyrophosphorylase activity","type":"related"}],"termid":"GO:0047350"}


id: PBO:0055132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2551","termid":"PBO:0055132"}


id: PBO:0085330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol transfer protein; has a potential role in regulating lipid and fatty acid metabolism under heme-depleted conditions; interacts specifically with thioredoxin peroxidase; may have a role in oxidative stress resistance; protein abundance increases in response to DNA replication stress","termid":"PBO:0085330"}


id: GO:0016236
data:
  {"annotated_genes":["SJAG_01716","SJAG_01561","SJAG_00115","SJAG_03100","SJAG_00645","SJAG_01415","SJAG_05289","SJAG_04219","SJAG_02852","SJAG_04837","SJAG_01783","SJAG_04963","SJAG_03435","SJAG_03718","SJAG_00974","SJAG_01382","SJAG_03170","SJAG_04991","SJAG_00114","SJAG_04552","SJAG_02539","SJAG_00004","SJAG_04023","SJAG_00355","SJAG_01367","SJAG_05017","SJAG_04021","SJAG_04232","SJAG_02100","SJAG_00380","SJAG_02433","SJAG_04496","SJAG_05261","SJAG_02525","SJAG_01274","SJAG_00029","SJAG_01251","SJAG_02699","SJAG_03345","SJAG_00053","SJAG_02441","SJAG_04294","SJAG_02414","SJAG_00850","SJAG_04435","SJAG_00059","SJAG_04860","SJAG_01876","SJAG_02655","SJAG_01283","SJAG_00763","SJAG_02640","SJAG_01467","SJAG_01722","SJAG_04502","SJAG_01073","SJAG_03851","SJAG_06309","SJAG_00732","SJAG_04655","SJAG_02723","SJAG_00079","SJAG_03136","SJAG_01135","SJAG_00820","SJAG_03467"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87304,87687,88143,89563,90485,91103,92110,92390,93011,93400,94114,94300,96804,97083,97097,97366,98105,98611,99477,99780,100618,101632,102033,103089,103241,104389,104457,108050,108139,109265,109302,109322,109768,110151,111009,111183,113143,114658,117313],"is_not":false,"summary":null,"term":"GO:0016236"},{"annotations":[91101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035973"},{"annotations":[104100,113141,97081,103088,97365,108915,117312,94299,99476,109262,87303,94111,91102,89559,92389,96123,79070,113331,111182,92108,72131],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000045"},{"annotations":[88736,113142,89560],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0097352"},{"annotations":[94112],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016240"},{"annotations":[108137,89562,97096,99779,109264,98104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061723"},{"annotations":[104324,89446,103090,92111,110152,114033,72132,111184,114720,91104,117314,97367,79071,88524,94115,94454,87305,92391,113145,99199,99478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000423"},{"annotations":[106141],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0016242"},{"annotations":[109266,98900,97098,98106,99781,108051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044804"},{"annotations":[99782,99479,108140,87306,97099,97084,101633,98107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000425"},{"annotations":[111185,72130,89564,79069,115719,108141,104325,107691,91105,99200,103091,97368,93404,93733,117315,87307,99480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034727"},{"annotations":[108052,108142],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2000786"},{"annotations":[97114],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1901098"},{"annotations":[97499,105751],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0016239"},{"annotations":[88998],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140501"},{"annotations":[117317,114721,116092,102931,108143,99481,104327,89892,79073,72134,98901,99202,108053,103881,110153,103092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061709"},{"annotations":[99482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034517"}]},"cv_name":"biological_process","definition":"The autophagic process that proceeds via the formation of an autophagosome.","definition_xrefs":["PMID:24366339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autophagy","termid":"GO:0006914"}],"gene_count":66,"genes_by_uniquename":{"SJAG_00004":null,"SJAG_00029":null,"SJAG_00053":null,"SJAG_00059":null,"SJAG_00079":null,"SJAG_00114":null,"SJAG_00115":null,"SJAG_00355":null,"SJAG_00380":null,"SJAG_00645":null,"SJAG_00732":null,"SJAG_00763":null,"SJAG_00820":null,"SJAG_00850":null,"SJAG_00974":null,"SJAG_01073":null,"SJAG_01135":null,"SJAG_01251":null,"SJAG_01274":null,"SJAG_01283":null,"SJAG_01367":null,"SJAG_01382":null,"SJAG_01415":null,"SJAG_01467":null,"SJAG_01561":null,"SJAG_01716":null,"SJAG_01722":null,"SJAG_01783":null,"SJAG_01876":null,"SJAG_02100":null,"SJAG_02414":null,"SJAG_02433":null,"SJAG_02441":null,"SJAG_02525":null,"SJAG_02539":null,"SJAG_02640":null,"SJAG_02655":null,"SJAG_02699":null,"SJAG_02723":null,"SJAG_02852":null,"SJAG_03100":null,"SJAG_03136":null,"SJAG_03170":null,"SJAG_03345":null,"SJAG_03435":null,"SJAG_03467":null,"SJAG_03718":null,"SJAG_03851":null,"SJAG_04021":null,"SJAG_04023":null,"SJAG_04219":null,"SJAG_04232":null,"SJAG_04294":null,"SJAG_04435":null,"SJAG_04496":null,"SJAG_04502":null,"SJAG_04552":null,"SJAG_04655":null,"SJAG_04837":null,"SJAG_04860":null,"SJAG_04963":null,"SJAG_04991":null,"SJAG_05017":null,"SJAG_05261":null,"SJAG_05289":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"macroautophagy","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1632852","GO:0034262","Reactome:R-HSA-5205685","Reactome:R-HSA-8934903"],"synonyms":[{"name":"autophagy","type":"broad"},{"name":"selective autophagy","type":"narrow"}],"termid":"GO:0016236","terms_by_termid":{"GO:0000045":null,"GO:0000423":null,"GO:0000425":null,"GO:0016236":null,"GO:0016239":null,"GO:0016240":null,"GO:0016242":null,"GO:0034517":null,"GO:0034727":null,"GO:0035973":null,"GO:0044804":null,"GO:0061709":null,"GO:0061723":null,"GO:0097352":null,"GO:0140501":null,"GO:1901098":null,"GO:2000786":null}}


id: PBO:0064395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNN interacting serine and arginine rich protein","termid":"PBO:0064395"}


id: PBO:0055266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2693","termid":"PBO:0055266"}


id: GO:0042796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of small nuclear RNA (snRNA) from a DNA template by RNA Polymerase III (Pol III), originating at a Pol III promoter.","definition_xrefs":["ISBN:0321000382","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"},{"relation_name":"is_a","term_name":"snRNA transcription","termid":"GO:0009301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467","GO:0016073"],"is_obsolete":false,"name":"snRNA transcription by RNA polymerase III","synonyms":[{"name":"snRNA transcription from Pol III promoter","type":"exact"},{"name":"snRNA transcription from RNA polymerase III promoter","type":"exact"}],"termid":"GO:0042796"}


id: MONDO:1012339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"reduced glutathione deficiency, non-human animal","termid":"MONDO:1011699"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reduced glutathione deficiency, sheep","secondary_identifiers":["OMIA:001235-9940"],"termid":"MONDO:1012339","xrefs":{"Monarch":{"xref_id":"1012339"}}}


id: GO:0031546
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a brain-derived neurotrophic factor receptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotrophin receptor binding","termid":"GO:0005165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"brain-derived neurotrophic factor receptor binding","synonyms":[{"name":"BDNF receptor binding","type":"exact"},{"name":"brain-derived neurotrophic factor ligand","type":"narrow"}],"termid":"GO:0031546"}


id: GO:0001952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of attachment of a cell to the extracellular matrix.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-substrate adhesion","termid":"GO:0010810"},{"relation_name":"regulates","term_name":"cell-matrix adhesion","termid":"GO:0007160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of cell-matrix adhesion","termid":"GO:0001952"}


id: PR:O59771
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UMP-CMP kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04532","PANTHER:PTHR23359:SF23","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridylate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1795.05c","secondary_identifiers":["UniProtKB:O59771"],"synonyms":[{"name":"ATP:UMP phosphotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CMPK1","type":"exact"},{"name":"UK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"UMP kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"UMPK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"dCMP kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"deoxycytidylate kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"uridine monophosphate kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59771"}


id: PBO:0000334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GTPase binding protein (predicted)","termid":"PBO:0000334"}


id: MONDO:0100301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing capillary infantile hemangioma.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemangioma, capillary infantile, susceptibility to","secondary_identifiers":["MEDGEN:864857","UMLS:C4016420"],"termid":"MONDO:0100301","xrefs":{"Monarch":{"xref_id":"0100301"}}}


id: FYPO:0005548
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to brefeldin A.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"increased protein phosphorylation during cellular response to brefeldin A","synonyms":[{"name":"increased protein phosphorylation during cellular response to brefeldin A during mitotic cell cycle","type":"related"},{"name":"increased protein phosphorylation during cellular response to brefeldin A during vegetative growth","type":"exact"}],"termid":"FYPO:0005548"}


id: GO:0008944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of oligopeptides, with broad specificity. Gly or Ala commonly occur as P1 or P1' residues, but more distant residues are also important, as is shown by the fact that Z-Gly-Pro-Gly-Gly-Pro-Ala is cleaved at the Gly-Gly bond, but not Z-(Gly)5.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete oligopeptidase A activity (obsolete GO:0008944)","synonyms":[{"name":"68000-M signalpeptide hydrolase activity","type":"related"},{"name":"oligopeptidase A activity","type":"exact"}],"termid":"GO:0008944"}


id: GO:0018793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3,5-dibromo-4-hydroxybenzoate + H+ = CO2 + 2,6-dibromophenol.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 3,5-dibromo-4-hydroxybenzoate decarboxylase activity (obsolete GO:0018793)","termid":"GO:0018793"}


id: GO:0019865
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an immunoglobulin.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"immunoglobulin binding","termid":"GO:0019865"}


id: FYPO:0002685
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of trehalose measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell","termid":"FYPO:0000990"},{"relation_name":"is_a","term_name":"altered cellular trehalose level","termid":"FYPO:0001446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular trehalose level","synonyms":[{"name":"increased trehalose accumulation","type":"related"}],"termid":"FYPO:0002685"}


id: MONDO:0009756
data:
  {"annotated_genes":["SJAG_00570"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86406],"is_not":false,"summary":null,"term":"MONDO:0009756"}]},"cv_name":"mondo","definition":"Niemann-Pick disease type A is a very severe subtype of Niemann-Pick disease, an autosomal recessive lysosomal disease, and is characterized clinically by onset in infancy or early childhood with failure to thrive, hepatosplenomegaly, and rapidly progressive neurodegenerative disorders.","definition_xrefs":["Orphanet:77292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"acid sphingomyelinase deficiency","termid":"MONDO:0100464"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00570":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0002561","MONDO:0005046","MONDO:0005066","MONDO:0005328","MONDO:0006025"],"is_obsolete":false,"name":"Niemann-Pick disease type A","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:78650","NCIT:C126561","UMLS:C0268242","NANDO:2201206","DOID:0070111","icd11.foundation:530611243","NANDO:1200061","OMIM:257200","MESH:D052536","GARD:7206","SCTID:52165006"],"synonyms":[{"name":"Niemann-PICK disease, type A","type":"related"},{"name":"Niemann-Pick disease, Intermediate, protracted neurovisceral","type":"related"},{"name":"sphingomyelin lipidosis","type":"related"},{"name":"sphingomyelinase deficiency","type":"related"}],"termid":"MONDO:0009756","terms_by_termid":{"MONDO:0009756":null},"xrefs":{"Monarch":{"xref_id":"0009756"}}}


id: PBO:0083077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dipeptidyl aminopeptidase; synthesized as a glycosylated precursor; localizes to the vacuolar membrane; similar to Ste13p","termid":"PBO:0083077"}


id: PBO:0113529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar carboxypeptidase Y (proteinase C, CPY); broad-specificity C-terminal exopeptidase involved in non-specific protein degradation in vacuole; involved, along with functional homolog Prc1p, in vacuolar zymogen activation, breakdown of autophagic body, and autophagosome-dependent protein synthesis; role in phytochelatin synthesis; targeted to vacuole via Vps10p-dependent endosomal vacuolar protein sorting pathway; member of serine carboxypeptidase family; N-glycosylated","termid":"PBO:0113529"}


id: PBO:0044288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome X open reading frame 51B","termid":"PBO:0044288"}


id: PBO:0062132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily E member 1","termid":"PBO:0062132"}


id: GO:0035273
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a phthalate, any ester or salt of phthalic acid.","definition_xrefs":["PMID:31116073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"phthalate binding","termid":"GO:0035273"}


id: GO:0071980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell gliding that results from the actions of cell surface adhesin proteins that are propelled by membrane motor proteins.","definition_xrefs":["PMID:18461074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell gliding","termid":"GO:0071976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell surface adhesin-mediated gliding motility","termid":"GO:0071980"}


id: PBO:0030825
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_heterothallic_h+_cells","termid":"PBO:0030825"}


id: GO:1905691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a lipid particle into its constituent components.","definition_xrefs":["GO_REF:0000079","GOC:pr","GOC:autophagy","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid droplet organization","termid":"GO:0034389"},{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipid droplet disassembly","synonyms":[{"name":"adiposome disassembly","type":"exact"},{"name":"lipid body disassembly","type":"exact"},{"name":"lipid droplet reserve breakdown","type":"exact"},{"name":"lipid particle disassembly","type":"exact"}],"termid":"GO:1905691"}


id: GO:0006664
data:
  {"annotated_genes":["SJAG_06383","SJAG_02488","SJAG_05327","SJAG_02776","SJAG_06425","SJAG_03672","SJAG_04881","SJAG_03066","SJAG_04924","SJAG_00831","SJAG_03801","SJAG_02523","SJAG_01570","SJAG_00846","SJAG_01860","SJAG_04975","SJAG_04119","SJAG_01227","SJAG_02168","SJAG_02913","SJAG_01416","SJAG_04878","SJAG_00295","SJAG_02804","SJAG_00506","SJAG_00068","SJAG_03292","SJAG_05278","SJAG_03878","SJAG_04337","SJAG_04165","SJAG_03506","SJAG_05311","SJAG_03115","SJAG_04913","SJAG_03953"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115632,114282,97596,91712,92476,103274,108072,93998,103212,89029,88402,111847,88128,116732,114708,101104,90881,113434,98161,109421,86915,107037,98370,93013,111091,99723,92566,90708,102541,99789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[96995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006676"},{"annotations":[91290,95217,112026,94736,90218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051999"},{"annotations":[91291,112027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006675"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycolipids, a class of 1,2-di-O-acylglycerols joined at oxygen 3 by a glycosidic linkage to a carbohydrate part (usually a mono-, di- or tri-saccharide). Some substances classified as bacterial glycolipids have the sugar group acylated by one or more fatty acids and the glycerol group may be absent.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane lipid metabolic process","termid":"GO:0006643"},{"relation_name":"is_a","term_name":"liposaccharide metabolic process","termid":"GO:1903509"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00068":null,"SJAG_00295":null,"SJAG_00506":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_01227":null,"SJAG_01416":null,"SJAG_01570":null,"SJAG_01860":null,"SJAG_02168":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_03953":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04337":null,"SJAG_04878":null,"SJAG_04881":null,"SJAG_04913":null,"SJAG_04924":null,"SJAG_04975":null,"SJAG_05278":null,"SJAG_05311":null,"SJAG_05327":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"glycolipid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glycolipid metabolism","type":"exact"}],"termid":"GO:0006664","terms_by_termid":{"GO:0006506":null,"GO:0006675":null,"GO:0006676":null,"GO:0051999":null}}


id: PBO:0047016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A19","termid":"PBO:0047016"}


id: PR:O59736
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- leu3 gene.","definition_xrefs":["UniProtKB:O59736","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-isopropylmalate synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.16c","synonyms":[{"name":"Spom972h-leu3","type":"exact"},{"name":"alpha-IPM synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"alpha-isopropylmalate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59736"}


id: PBO:0002480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase pseudogene","termid":"PBO:0002480"}


id: MONDO:0045029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Deuteromycetes infectious disease (obsolete MONDO:0045029)","secondary_identifiers":["SCTID:59258008"],"synonyms":[{"name":"infection by Deuteromycetes","type":"exact"},{"name":"infection caused by Deuteromycetes","type":"related"}],"termid":"MONDO:0045029","xrefs":{"Monarch":{"xref_id":"0045029"}}}


id: FYPO:0001459
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the level of transcription from a calcineurin-dependent response element (CDRE)-containing promoter is higher than normal in the absence of a calcium ion stimulus.","definition_xrefs":["PomBase:mah","PMID:21811607"],"gene_count":0,"genotype_count":0,"name":"obsolete increased basal transcription from CDRE promoter (obsolete FYPO:0001459)","synonyms":[{"name":"increased basal transcription from CDRE promoter during mitotic cell cycle","type":"related"},{"name":"increased basal transcription from CDRE promoter during vegetative growth","type":"exact"},{"name":"increased transcription from CRDE promoter in the absence of calcium","type":"exact"}],"termid":"FYPO:0001459"}


id: PBO:0088228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydantoin racemase family","termid":"PBO:0088228"}


id: MONDO:0010750
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ulnar hypoplasia-split foot syndrome is characterized by the association of severe ulnar hypoplasia, absence of fingers two to five, and split-foot. It has been described in four males belonging to two generations of the same family. X-linked recessive inheritance is suggested, but autosomal dominant transmission cannot be excluded.","definition_xrefs":["Orphanet:1122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"ulnar hypoplasia-split foot syndrome","secondary_identifiers":["GARD:5400","MEDGEN:333256","MESH:C536936","OMIM:314360","UMLS:C1839123"],"synonyms":[{"name":"Van De Berghe Dequeker syndrome","type":"related"},{"name":"Van den Berghe-Dequecker syndrome","type":"exact"},{"name":"complete absence of the ulna and of fingers 2 to 5, together with lobster-claw deformity of the feet","type":"related"},{"name":"familial ulnar aplasia and lobster claw syndrome","type":"related"},{"name":"severe ulnar aplasia and lobster claw feet","type":"related"},{"name":"ulnar hypoplasia lobster claw deformity of feet","type":"related"},{"name":"ulnar hypoplasia with lobster-claw deformity of feet","type":"related"},{"name":"ulnar hypoplasia-lobster-claw deformity of feet syndrome","type":"exact"}],"termid":"MONDO:0010750","xrefs":{"Monarch":{"xref_id":"0010750"}}}


id: MONDO:0006473
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tracheal squamous cell carcinoma (obsolete MONDO:0006473)","termid":"MONDO:0006473","xrefs":{"Monarch":{"xref_id":"0006473"}}}


id: MONDO:0017980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"syngnathia multiple anomalies","secondary_identifiers":["UMLS:C5190737","MEDGEN:1678646","Orphanet:3262","GARD:5092"],"synonyms":[{"name":"dobrow syndrome","type":"exact"},{"name":"syngnathia-multiple anomalies syndrome","type":"exact"}],"termid":"MONDO:0017980","xrefs":{"Monarch":{"xref_id":"0017980"}}}


id: MONDO:0100444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinopathy caused by bialleleic variants in the RLBP1 gene, often involving flecks in the retina.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"RLBP1-related retinopathy","synonyms":[{"name":"Bothnia retinal dystrophy","type":"narrow"},{"name":"NFRCD","type":"narrow"},{"name":"Newfoundland ROD-cone dystrophy","type":"narrow"},{"name":"Newfoundland rod-cone dystrophy","type":"narrow"},{"name":"RLBP1 cone-rod dystrophy","type":"narrow"},{"name":"RLBP1 retinopathy","type":"exact"},{"name":"Vasterbotten dystrophy","type":"narrow"},{"name":"Västerbotten dystrophy","type":"narrow"},{"name":"cone-rod dystrophy caused by mutation in RLBP1","type":"narrow"},{"name":"fundus albipunctatus","type":"narrow"},{"name":"pigmentary retinal dystrophy","type":"narrow"},{"name":"retinitis punctata albescens","type":"narrow"}],"termid":"MONDO:0100444","xrefs":{"Monarch":{"xref_id":"0100444"}}}


id: GO:0043509
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nonsteroidal regulator, composed of two covalently linked inhibin beta-A subunits (sometimes known as activin beta-A or activin/inhibin beta-A).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activin complex","termid":"GO:0048180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005576"],"is_obsolete":false,"name":"activin A complex","secondary_identifiers":["GO:0048181"],"termid":"GO:0043509"}


id: PBO:0045814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 4","termid":"PBO:0045814"}


id: GO:0009001
data:
  {"annotated_genes":["SJAG_04305"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101392],"is_not":false,"summary":null,"term":"GO:0009001"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + acetyl-CoA = O-acetyl-L-serine + CoA.","definition_xrefs":["RHEA:24560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine O-acyltransferase activity","termid":"GO:0016412"},{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"serine O-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00586","EC:2.3.1.30","MetaCyc:SERINE-O-ACETTRAN-RXN"],"synonyms":[{"name":"L-serine acetyltransferase activity","type":"related"},{"name":"SATase activity","type":"related"},{"name":"acetyl-CoA:L-serine O-acetyltransferase activity","type":"related"},{"name":"serine acetyltransferase activity","type":"related"},{"name":"serine transacetylase activity","type":"related"}],"termid":"GO:0009001","terms_by_termid":{"GO:0009001":null}}


id: MONDO:0002830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ovary transitional cell carcinoma (obsolete MONDO:0002830)","termid":"MONDO:0002830","xrefs":{"Monarch":{"xref_id":"0002830"}}}


id: GO:0018556
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,3-dihydroxybenzenoid + O2 = H+ + distal extradiol ring cleavage. Substrates are 2,2',3-trihydroxybiphenyl (forms 2-hydroxy-6-oxo-6-(2-hydroxyphenyl)-hexa-2,4-dienoate) and 2,2',3-trihydroxydiphenylether (forms 2,3-hydroxy-6-oxo-6-(2-hydroxyphenyl)-hexa-2,4-dienoate).","definition_xrefs":["UM-BBD_enzymeID:e0032"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,2',3-trihydroxybiphenyl dioxygenase activity (obsolete GO:0018556)","termid":"GO:0018556"}


id: PBO:0000925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase, NIMA related Fin1","termid":"PBO:0000925"}


id: PBO:0000209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intergenic RNA (predicted), possible alternative UTR","termid":"PBO:0000209"}


id: PBO:0042899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor H related 3","termid":"PBO:0042899"}


id: PBO:0074057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 36","termid":"PBO:0074057"}


id: FYPO:0003083
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at the mating-type locus is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest","termid":"FYPO:0003088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"abnormal replication fork arrest at mating-type locus","synonyms":[{"name":"abnormal replication fork arrest at mating-type locus during mitotic cell cycle","type":"related"},{"name":"abnormal replication fork arrest at mating-type locus during vegetative growth","type":"exact"}],"termid":"FYPO:0003083"}


id: PBO:0086575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; contains a zinc finger motif similar to that of Adr1p","termid":"PBO:0086575"}


id: MONDO:0800075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any dysostosis that involves the vertebrae, with or without involvement of the the ribs or the upper sides of the body.","gene_count":0,"genotype_count":0,"name":"obsolete dysostosis with predominant vertebral with and without costal involvement (obsolete MONDO:0800075)","termid":"MONDO:0800075","xrefs":{"Monarch":{"xref_id":"0800075"}}}


id: GO:0001972
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to retinoic acid, 3,7-dimethyl-9-(2,6,-trimethyl-1-cyclohexen-1-yl)-2,4,6,8-nonatetraenoic acid.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoid binding","termid":"GO:0005501"},{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"retinoic acid binding","termid":"GO:0001972"}


id: MONDO:1012298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"displaced abomasum, non-human animal","termid":"MONDO:1011663"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"displaced abomasum, water buffalo","secondary_identifiers":["OMIA:001119-89462"],"termid":"MONDO:1012298","xrefs":{"Monarch":{"xref_id":"1012298"}}}


id: GO:0006554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lysine, 2,6-diaminohexanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine metabolic process","termid":"GO:0006553"},{"relation_name":"is_a","term_name":"alpha-amino acid catabolic process","termid":"GO:1901606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"lysine catabolic process","secondary_identifiers":["Reactome:R-HSA-71064"],"synonyms":[{"name":"lysine breakdown","type":"exact"},{"name":"lysine catabolism","type":"exact"},{"name":"lysine degradation","type":"exact"}],"termid":"GO:0006554"}


id: PBO:0045012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIP2A intronic transcript 1","termid":"PBO:0045012"}


id: PBO:0000182
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness","termid":"PBO:0000182"}


id: PBO:0086739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; partially overlaps verified gene ERV2/YPR037C but doesn't share phenotypes; also overlaps dubious ORF YPR039W; null mutant displays increased levels of spontaneous Rad52p foci, increased biofilm information, different altered sensitivities to various chemcicals","termid":"PBO:0086739"}


id: MONDO:0018532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adenocarcinoma of liver and intrahepatic biliary tract (obsolete MONDO:0018532)","secondary_identifiers":["Orphanet:424943"],"synonyms":[{"name":"adenocarcinoma of liver and IBT","type":"exact"},{"name":"adenocarcinoma of the liver and IBT","type":"exact"},{"name":"adenocarcinoma of the liver and intrahepatic biliary tract","type":"exact"}],"termid":"MONDO:0018532","xrefs":{"Monarch":{"xref_id":"0018532"}}}


id: GO:0031265
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed upon binding of Fas/CD95/APO-1 to its ligand. The complex includes FADD/Mort1, procaspase-8/10 and c-FLIP in addition to the ligand-bound receptor.","definition_xrefs":["PMID:12628743","PMID:12655293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"death-inducing signaling complex","termid":"GO:0031264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"CD95 death-inducing signaling complex","synonyms":[{"name":"CD95 DISC","type":"exact"},{"name":"CD95 death-inducing signalling complex","type":"exact"},{"name":"Fas death-inducing signaling complex","type":"exact"}],"termid":"GO:0031265"}


id: PBO:0052491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 5","termid":"PBO:0052491"}


id: PBO:0040930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 1","termid":"PBO:0040930"}


id: _global:contains_process
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"[copied from inverse property 'occurs in'] b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contains_process","secondary_identifiers":["BFO:0000067"],"termid":"_global:contains_process"}


id: PBO:0085731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the synthesis of GlcNAc-PI; GlcNAc-PI is the first intermediate in the synthesis of glycosylphosphatidylinositol (GPI) anchors; homologous to the human PIG-C protein; GlcNAc-PI stands for N-acetylglucosaminyl phosphatidylinositol","termid":"PBO:0085731"}


id: GO:0019841
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to retinol, vitamin A1, 2,6,6-trimethyl-1-(9'-hydroxy-3',7'-dimethylnona-1',3',5',7'-tetraenyl)cyclohex-1-ene, one of the three components that makes up vitamin A. Retinol is an intermediate in the vision cycle and it also plays a role in growth and differentiation.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoid binding","termid":"GO:0005501"},{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"},{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"retinol binding","synonyms":[{"name":"vitamin A1 alcohol binding","type":"exact"},{"name":"vitamin A1 binding","type":"exact"}],"termid":"GO:0019841"}


id: PBO:0055675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase E, hormone sensitive type","termid":"PBO:0055675"}


id: PBO:0058366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4738","termid":"PBO:0058366"}


id: GO:0030738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + tyramine = N-methyltyramine + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:14865","EC:2.1.1.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"tyramine N-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02384","MetaCyc:TYRAMINE-N-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"DIB O-methyltransferase (3,5-diiodo-4-hydroxy-benzoic acid)","type":"related"},{"name":"S-adenosyl-L-methionine:tyramine N-methyltransferase activity","type":"related"},{"name":"S-adenosyl-methionine:tyramine N-methyltransferase activity","type":"related"},{"name":"tyramine methylpherase activity","type":"related"}],"termid":"GO:0030738"}


id: SO:0002176
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A substitution that is the result of base-calling or assembly error.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration_artifact","termid":"SO:0002172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"substitution_artifact","synonyms":[{"name":"substitution artifact","type":"exact"}],"termid":"SO:0002176"}


id: MONDO:0030890
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia","termid":"MONDO:0020135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia, IIA 17","secondary_identifiers":["UMLS:C5676999","OMIM:619909","MEDGEN:1809583"],"synonyms":[{"name":"PCH17","type":"exact"},{"name":"pontocerebellar hypoplasia, IIA 17","type":"exact"}],"termid":"MONDO:0030890","xrefs":{"Monarch":{"xref_id":"0030890"}}}


id: GO:0030418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotianamine, 2(S),3'2(S),3''(S)-N-(N-(3-amino-3-carboxypropyl)-3-amino-3-carboxypropyl)-azetidine-2-carboxylic acid.","definition_xrefs":["PMID:10069850","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid biosynthetic process","termid":"GO:0008652"},{"relation_name":"is_a","term_name":"nicotianamine metabolic process","termid":"GO:0030417"},{"relation_name":"is_a","term_name":"biogenic amine biosynthetic process","termid":"GO:0042401"},{"relation_name":"is_a","term_name":"tricarboxylic acid biosynthetic process","termid":"GO:0072351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"nicotianamine biosynthetic process","synonyms":[{"name":"nicotianamine anabolism","type":"exact"},{"name":"nicotianamine biosynthesis","type":"exact"},{"name":"nicotianamine formation","type":"exact"},{"name":"nicotianamine synthesis","type":"exact"}],"termid":"GO:0030418"}


id: PBO:0001932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Nob1 (predicted)","termid":"PBO:0001932"}


id: PBO:0090333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER GPI biosynthesis protein Rft1","termid":"PBO:0090333"}


id: PBO:0081715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 641","termid":"PBO:0081715"}


id: PBO:0092018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Leucine (uaa), mitochondrial","termid":"PBO:0092018"}


id: PR:Q9UUI3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sap145 gene.","definition_xrefs":["UniProtKB:Q9UUI3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor sap145 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.10c","synonyms":[{"name":"Spom972h-sap145","type":"exact"},{"name":"spliceosome-associated protein 145 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUI3"}


id: MONDO:0011936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microphthalmia with brain and digit anomalies is characterized by anophthalmia or microphthalmia, retinal dystrophy, and/or myopia, associated in some cases with cerebral anomalies. It has been described in two families. Polydactyly may also be present. Linkage analysis allowed identification of mutations in the BMP4 gene, which has already been shown to play a role in eye development.","definition_xrefs":["Orphanet:139471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic microphthalmia","termid":"MONDO:0016073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia with brain and digit anomalies","secondary_identifiers":["DOID:0111805","OMIM:607932","GARD:3645","UMLS:C1864689","MESH:C566440","SCTID:721878003","MEDGEN:355268"],"synonyms":[{"name":"Bakrania-Ragge syndrome","type":"exact"},{"name":"MCOPS6","type":"exact"},{"name":"anophthalmia clinical with micrognathia malformed ears digital anomalies and abnormal external genitalia","type":"related"},{"name":"anophthalmia, clinical, with micrognathia, malformed ears, digital anomalies, and abnormal external genitalia","type":"related"},{"name":"microphthalmia and pituitary anomalies","type":"related"},{"name":"microphthalmia syndromic 6","type":"related"},{"name":"microphthalmia with brain and digit anomalies","type":"exact"},{"name":"microphthalmia with brain and digit developmental anomalies","type":"related"},{"name":"microphthalmia, syndromic 6","type":"related"},{"name":"microphthalmia, syndromic type 6","type":"exact"},{"name":"syndromic microphthalmia type 6","type":"exact"}],"termid":"MONDO:0011936","xrefs":{"Monarch":{"xref_id":"0011936"}}}


id: GO:0033526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next, from other compounds, including L-glutamate.","definition_xrefs":["MetaCyc:PWY-5188","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate metabolic process","termid":"GO:0006536"},{"relation_name":"is_a","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0033013","GO:0044281"],"is_obsolete":false,"name":"tetrapyrrole biosynthetic process from glutamate","synonyms":[{"name":"tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"tetrapyrrole formation from glutamate","type":"exact"},{"name":"tetrapyrrole synthesis from glutamate","type":"exact"}],"termid":"GO:0033526"}


id: GO:0097017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A renal system process in which proteins are taken up from the collecting ducts, glomerulus and proximal and distal loops of the nephron. In non-mammalian species, absorption may occur in related structures (e.g. protein absorption is observed in nephrocytes in Drosophila, see PMID:23264686).","definition_xrefs":["GOC:yaf","PMID:18431508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal absorption","termid":"GO:0070293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal protein absorption","termid":"GO:0097017"}


id: FYPO:0002698
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of methylenetetrahydrofolate reductase (NADPH) activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal methylenetetrahydrofolate reductase (NADPH) activity","termid":"FYPO:0002695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"increased methylenetetrahydrofolate reductase (NADPH) activity","termid":"FYPO:0002698"}


id: GO:0050837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a selenide-sulfide bond to form the cystine-like L-cysteinyl-L-selenocysteine, as in vertebrate selenopeptide P.","definition_xrefs":["RESID:AA0358"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-cysteinyl-L-selenocysteine (obsolete GO:0050837)","termid":"GO:0050837"}


id: GO:0060600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an epithelial cord, rod or tube bifurcates at its end.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"part_of","term_name":"morphogenesis of a branching epithelium","termid":"GO:0061138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dichotomous subdivision of an epithelial terminal unit","synonyms":[{"name":"primary branching of an epithelium","type":"related"}],"termid":"GO:0060600"}


id: PBO:0016881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein","termid":"PBO:0016881"}


id: PBO:0001187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf11 (predicted)","termid":"PBO:0001187"}


id: PBO:0030699
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_catalase_activity","termid":"PBO:0030699"}


id: GO:0097744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The elimination of urate salt or uric acid from peritubular capillaries (or surrounding hemolymph in invertebrates) into the renal tubules to be incorporated subsequently into the urine.","definition_xrefs":["PMID:3906799","Wikipedia:Renal_physiology#Secretion","GOC:jl","PMID:25287933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal tubular secretion","termid":"GO:0097254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal urate salt excretion","synonyms":[{"name":"urate excretion","type":"broad"},{"name":"urate salt excretion","type":"broad"}],"termid":"GO:0097744"}


id: GO:0097531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a mast cell within or between different tissues and organs of the body.","definition_xrefs":["PMID:24152847","GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte migration","termid":"GO:0097529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mast cell migration","termid":"GO:0097531"}


id: MONDO:0015974
data:
  {"annotated_genes":["SJAG_04199","SJAG_02038","SJAG_02527","SJAG_00677","SJAG_05024"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012650"},{"annotations":[86555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011686"},{"annotations":[85136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009973"},{"annotations":[85388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014168"},{"annotations":[85939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014391"}]},"cv_name":"mondo","definition":"Severe combined immunodeficiency (SCID) comprises a group of rare monogenic primary immunodeficiency disorders characterized by a lack of functional peripheral T lymphocytes resulting in early-onset severe respiratory infections and failure to thrive. They are classified according to immunological phenotype into SCID with absence of T cells but presence of B cells (T-B+ SCID) or SCID with absence of both (T-B- SCID). Both of these groups include several forms, with or without natural killer (NK) cells.","definition_xrefs":["Orphanet:183660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined immunodeficiency","termid":"MONDO:0015131"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00677":null,"SJAG_02038":null,"SJAG_02527":null,"SJAG_04199":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"severe combined immunodeficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:31323000","NCIT:C3472","MedDRA:10069566","DOID:627","GARD:7628","icd11.foundation:963193284","HP:0004430","MEDGEN:88328","MESH:D016511","NORD:1706","UMLS:C0085110"],"synonyms":[{"name":"SCID","type":"exact"},{"name":"combined T and B cell inborn immunodeficiency","type":"exact"},{"name":"severe combined immunodeficiency","type":"exact"},{"name":"severe combined immunodeficiency (disease)","type":"exact"},{"name":"severe combined immunodeficiency disease","type":"exact"}],"termid":"MONDO:0015974","terms_by_termid":{"MONDO:0009973":null,"MONDO:0011686":null,"MONDO:0012650":null,"MONDO:0014168":null,"MONDO:0014391":null},"xrefs":{"Monarch":{"xref_id":"0015974"}}}


id: PATO:0000062
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sleep quality defined by the mathematic properties of the relative time frames of the sleep cycle.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral quality of a process","termid":"PATO:0001530"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sleep pattern","termid":"PATO:0000062"}


id: PBO:0078554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 43B","termid":"PBO:0078554"}


id: PBO:0090382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRC complex (ER membrane insertion) subunit Get4","termid":"PBO:0090382"}


id: MONDO:0005199
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete peripartum cardiomyopathy (obsolete MONDO:0005199)","termid":"MONDO:0005199","xrefs":{"Monarch":{"xref_id":"0005199"}}}


id: MONDO:0014466
data:
  {"annotated_genes":["SJAG_02791"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86365],"is_not":false,"summary":null,"term":"MONDO:0014466"}]},"cv_name":"mondo","definition":"Any Neu-Laxova syndrome in which the cause of the disease is a mutation in the PSAT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Neu-Laxova syndrome","termid":"MONDO:0000179"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02791":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"Neu-Laxova syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:22335","OMIM:616038","Orphanet:583602","DOID:0080075","UMLS:C4015019","MEDGEN:863456"],"synonyms":[{"name":"NEU-Laxova syndrome 2","type":"related"},{"name":"NLS2","type":"related"},{"name":"Neu-Laxova syndrome 2","type":"exact"},{"name":"Neu-Laxova syndrome caused by mutation in PSAT1","type":"exact"},{"name":"Neu-Laxova syndrome due to phosphoserine aminotransferase deficiency","type":"exact"},{"name":"Neu-Laxova syndrome type 2","type":"exact"},{"name":"PSAT1 Neu-Laxova syndrome","type":"exact"},{"name":"phosphoserine aminotransferase deficiency, prenatal form","type":"exact"}],"termid":"MONDO:0014466","terms_by_termid":{"MONDO:0014466":null},"xrefs":{"Monarch":{"xref_id":"0014466"}}}


id: GO:0033002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a muscle cell population by cell division.","definition_xrefs":["CL:0000187","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle cell proliferation","synonyms":[{"name":"myocyte proliferation","type":"exact"}],"termid":"GO:0033002"}


id: PBO:0044078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin like 1","termid":"PBO:0044078"}


id: GO:1900960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of 17-methylnonadec-1-ene metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of olefin metabolic process","termid":"GO:1900909"},{"relation_name":"is_a","term_name":"regulation of 17-methylnonadec-1-ene metabolic process","termid":"GO:1900959"},{"relation_name":"negatively_regulates","term_name":"17-methylnonadec-1-ene metabolic process","termid":"GO:1900882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of 17-methylnonadec-1-ene metabolic process","synonyms":[{"name":"down regulation of 17-methylnonadec-1-ene metabolic process","type":"exact"},{"name":"down regulation of 17-methylnonadec-1-ene metabolism","type":"exact"},{"name":"down-regulation of 17-methylnonadec-1-ene metabolic process","type":"exact"},{"name":"down-regulation of 17-methylnonadec-1-ene metabolism","type":"exact"},{"name":"downregulation of 17-methylnonadec-1-ene metabolic process","type":"exact"},{"name":"downregulation of 17-methylnonadec-1-ene metabolism","type":"exact"},{"name":"inhibition of 17-methylnonadec-1-ene metabolic process","type":"narrow"},{"name":"inhibition of 17-methylnonadec-1-ene metabolism","type":"exact"},{"name":"negative regulation of 17-methylnonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900960"}


id: PBO:0091955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf meiotic drive poison Wtf13","termid":"PBO:0091955"}


id: GO:0070093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of glucagon.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucagon secretion","termid":"GO:0070092"},{"relation_name":"is_a","term_name":"negative regulation of peptide hormone secretion","termid":"GO:0090278"},{"relation_name":"negatively_regulates","term_name":"glucagon secretion","termid":"GO:0070091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"negative regulation of glucagon secretion","synonyms":[{"name":"down regulation of glucagon secretion","type":"exact"},{"name":"down-regulation of glucagon secretion","type":"exact"},{"name":"downregulation of glucagon secretion","type":"exact"},{"name":"inhibition of glucagon secretion","type":"narrow"}],"termid":"GO:0070093"}


id: PBO:0077319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 54","termid":"PBO:0077319"}


id: GO:0043186
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small cytoplasmic, non-membranous RNA/protein complex aggregate in the primordial germ cells of many higher eukaryotes.","definition_xrefs":["GOC:kmv","PMID:11262230","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ribonucleoprotein granule","termid":"GO:0036464"},{"relation_name":"part_of","term_name":"germ plasm","termid":"GO:0060293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"P granule","secondary_identifiers":["GO:0018994"],"synonyms":[{"name":"germline granule","type":"broad"},{"name":"nuage","type":"narrow"},{"name":"polar granule","type":"narrow"}],"termid":"GO:0043186"}


id: GO:0030893
data:
  {"annotated_genes":["SJAG_05019","SJAG_03926","SJAG_01831","SJAG_03698"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87282,107224,107304,116554],"is_not":false,"summary":null,"term":"GO:0030893"}]},"cv_name":"cellular_component","definition":"A cohesin complex that mediates sister chromatid cohesion during meiosis; has a subunit composition distinct from that of the mitotic cohesin complex.","definition_xrefs":["GOC:mah","PMID:12750522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cohesin complex","termid":"GO:0008278"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01831":null,"SJAG_03698":null,"SJAG_03926":null,"SJAG_05019":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"meiotic cohesin complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0034991"],"synonyms":[{"name":"nuclear meiotic cohesin complex","type":"related"}],"termid":"GO:0030893","terms_by_termid":{"GO:0030893":null}}


id: PBO:0046329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase superfamily member 1","termid":"PBO:0046329"}


id: MONDO:0024338
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glandular cell neoplasm","termid":"MONDO:0024276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucinous neoplasm","secondary_identifiers":["MEDGEN:235339","NCIT:C7070","UMLS:C1334811"],"synonyms":[{"name":"mucinous neoplasm","type":"exact"},{"name":"mucinous tumor","type":"exact"},{"name":"mucinous tumour","type":"exact"}],"termid":"MONDO:0024338","xrefs":{"Monarch":{"xref_id":"0024338"}}}


id: PBO:0059465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mutS homolog 4","termid":"PBO:0059465"}


id: MONDO:1010605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital hypothyroidism that occurs in goat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypothyroidism, non-human animal","termid":"MONDO:1010057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypothyroidism, goat","secondary_identifiers":["OMIA:000536-9925"],"termid":"MONDO:1010605","xrefs":{"Monarch":{"xref_id":"1010605"}}}


id: GO:0120084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a filopodium, a thin, stiff protrusion extended by the endothelial tip cell of a vascular sprout.","definition_xrefs":["GOC:cvs","PMID:28264837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filopodium assembly","termid":"GO:0046847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"endothelial tip cell filopodium assembly","termid":"GO:0120084"}


id: GO:0045654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of megakaryocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid cell differentiation","termid":"GO:0045639"},{"relation_name":"is_a","term_name":"regulation of megakaryocyte differentiation","termid":"GO:0045652"},{"relation_name":"positively_regulates","term_name":"megakaryocyte differentiation","termid":"GO:0030219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of megakaryocyte differentiation","synonyms":[{"name":"activation of megakaryocyte differentiation","type":"narrow"},{"name":"stimulation of megakaryocyte differentiation","type":"narrow"},{"name":"up regulation of megakaryocyte differentiation","type":"exact"},{"name":"up-regulation of megakaryocyte differentiation","type":"exact"},{"name":"upregulation of megakaryocyte differentiation","type":"exact"}],"termid":"GO:0045654"}


id: GO:0014883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of conversion of fast-contracting muscle fibers to a slower character. This may involve slowing of contractile rate, slow myosin gene induction, increase in oxidative metabolic properties, altered electrophysiology and altered innervation. This process also regulates skeletal muscle adapatation.","definition_xrefs":["GOC:ef","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle adaptation","termid":"GO:0014733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transition between fast and slow fiber","synonyms":[{"name":"transition between fast and slow fibre","type":"exact"},{"name":"transition fast-slow fiber","type":"exact"},{"name":"transition fast-slow fibre","type":"exact"}],"termid":"GO:0014883"}


id: MONDO:0021157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cervicitis","termid":"MONDO:0002345"},{"relation_name":"is_a","term_name":"gonorrhea","termid":"MONDO:0004277"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonococcal cervicitis","secondary_identifiers":["MEDGEN:678343","SCTID:237083000","UMLS:C0812378","icd11.foundation:1706835456"],"synonyms":[{"name":"gonorrhea of cervix","type":"exact"},{"name":"gonorrhea of uterine cervix","type":"exact"},{"name":"gonorrhoea of cervix","type":"exact"},{"name":"gonorrhoea of uterine cervix","type":"exact"}],"termid":"MONDO:0021157","xrefs":{"Monarch":{"xref_id":"0021157"}}}


id: PBO:0013785
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli MutY","termid":"PBO:0013785"}


id: PBO:0047182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 200 member C","termid":"PBO:0047182"}


id: PBO:0089704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER fusion GTPase, atlastin Sey1","termid":"PBO:0089704"}


id: PBO:0089188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maf-like protein, nucleoside-triphosphate diphosphatase, human ASMTL ortholog","termid":"PBO:0089188"}


id: PBO:0043414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyopathy associated 5","termid":"PBO:0043414"}


id: PBO:0084455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannosyltransferase; involved in adding the 4th and 5th mannose residues of O-linked glycans","termid":"PBO:0084455"}


id: PBO:0044849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 131D (pseudogene)","termid":"PBO:0044849"}


id: MONDO:0013238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"17q23.1q23.2 microdeletion syndrome is a recently described syndrome characterized by developmental delay, microcephaly, short stature, heart defects and limb abnormalities.","definition_xrefs":["Orphanet:261279"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 17","termid":"MONDO:0016915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 17q23.1-q23.2 deletion syndrome","secondary_identifiers":["GARD:10936","DOID:0060405","OMIM:613355","MEDGEN:461957","UMLS:C3150607","SCTID:719584008"],"synonyms":[{"name":"17q23.1-q23.2 microdeletion syndrome","type":"exact"},{"name":"17q23.1q23.2 microdeletion syndrome","type":"exact"},{"name":"Del(17)(q23.1q23.2)","type":"exact"},{"name":"chromosome 17q23.1-q23.2 deletion syndrome","type":"exact"},{"name":"chromosome 17q23.1-q23.2 deletion syndrome, isolated cases","type":"exact"},{"name":"monosomy 17q23.1-q23.2","type":"exact"},{"name":"monosomy 17q23.1q23.2","type":"exact"}],"termid":"MONDO:0013238","xrefs":{"Monarch":{"xref_id":"0013238"}}}


id: PBO:0028302
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_mitosis","termid":"PBO:0028302"}


id: PBO:0062456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 129 pseudogene","termid":"PBO:0062456"}


id: GO:1990595
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with basic secretagogues to initiate pseudo-allergic reactions in mast cells.","definition_xrefs":["PMID:25517090","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"mast cell secretagogue receptor activity","termid":"GO:1990595"}


id: PBO:0091827
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipid Transfer at Contact site","termid":"PBO:0091827"}


id: MONDO:0008396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculodental syndrome, Rutherfurd type is a rare genetic disorder that is primarily characterized by the classical triad of gingival fibromatosis, non-eruption of tooth and corneal dystrophy (bilateral corneal vascularization and opacity). Abnormally shaped teeth have also been reported. The syndrome is transmitted as an autosomal dominant trait.","definition_xrefs":["Orphanet:2709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculodental syndrome, Rutherfurd type","secondary_identifiers":["ICD9:759.89","GARD:212","MESH:C537732","MEDGEN:163222","OMIM:180900","SCTID:699754008","icd11.foundation:183543626","UMLS:C0796140"],"synonyms":[{"name":"Rutherfurd syndrome","type":"exact"},{"name":"corneal dystrophy with gum Hypertrophy","type":"exact"},{"name":"corneal dystrophy with gum hypertrophy","type":"exact"},{"name":"gingival Hypertrophy with corneal dystrophy","type":"exact"},{"name":"gingival hypertrophy corneal dystrophy","type":"exact"},{"name":"gingival hypertrophy-corneal dystrophy","type":"exact"}],"termid":"MONDO:0008396","xrefs":{"Monarch":{"xref_id":"0008396"}}}


id: CHEBI:17713
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dAMP","termid":"CHEBI:17713"}


id: MONDO:0035162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete PIK3CA-related overgrowth syndrome (obsolete MONDO:0035162)","secondary_identifiers":["Orphanet:530313"],"synonyms":[{"name":"PIK3CA-Related Overgrowth Spectrum","type":"exact"},{"name":"PROS","type":"exact"}],"termid":"MONDO:0035162","xrefs":{"Monarch":{"xref_id":"0035162"}}}


id: GO:1903762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization.","definition_xrefs":["GOC:BHF","GO_REF:0000059","GOC:TermGenie","GOC:mtg_cardiac_conduct_nov11","PMID:18337493","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization (obsolete GO:1903762)","synonyms":[{"name":"activation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"activation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"activation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"narrow"},{"name":"activation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"activation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"positive regulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"positive regulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"positive regulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"positive regulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up regulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"up regulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"exact"},{"name":"up regulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up regulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up-regulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"up-regulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up-regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"exact"},{"name":"up-regulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up-regulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"upregulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"upregulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"upregulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"exact"},{"name":"upregulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"upregulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"}],"termid":"GO:1903762"}


id: PBO:0084678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial assembly factor; important for assembly of the mitochondrial respiratory chain bc1 complex (complex III), cytochrome oxidase (complex IV), and the complex III-complex IV supercomplex; embedded in the mitochondrial inner membrane, facing the intermembrane space","termid":"PBO:0084678"}


id: PBO:0063865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIF1 5'-to-3' DNA helicase","termid":"PBO:0063865"}


id: GO:1900036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to heat.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of cellular response to heat","termid":"GO:1900034"},{"relation_name":"positively_regulates","term_name":"cellular response to heat","termid":"GO:0034605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to heat","synonyms":[{"name":"activation of cellular response to heat","type":"related"},{"name":"activation of cellular response to heat stress","type":"exact"},{"name":"positive regulation of cellular response to heat stress","type":"exact"},{"name":"up regulation of cellular response to heat","type":"related"},{"name":"up regulation of cellular response to heat stress","type":"exact"},{"name":"up-regulation of cellular response to heat","type":"related"},{"name":"up-regulation of cellular response to heat stress","type":"exact"},{"name":"upregulation of cellular response to heat","type":"related"},{"name":"upregulation of cellular response to heat stress","type":"exact"}],"termid":"GO:1900036"}


id: GO:0097754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A membrane bending process mediated by clathrin.","definition_xrefs":["GOC:pr","Wikipedia:Membrane_curvature"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane bending","termid":"GO:0097753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"clathrin-mediated membrane bending","termid":"GO:0097754"}


id: GO:1901092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein tetramerization.","definition_xrefs":["GOC:pm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein oligomerization","termid":"GO:0032461"},{"relation_name":"is_a","term_name":"regulation of protein tetramerization","termid":"GO:1901090"},{"relation_name":"positively_regulates","term_name":"protein tetramerization","termid":"GO:0051262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein tetramerization","synonyms":[{"name":"activation of protein tetramer assembly","type":"narrow"},{"name":"activation of protein tetramer biosynthesis","type":"narrow"},{"name":"activation of protein tetramer biosynthetic process","type":"narrow"},{"name":"activation of protein tetramer formation","type":"narrow"},{"name":"activation of protein tetramerization","type":"narrow"},{"name":"positive regulation of protein tetramer assembly","type":"exact"},{"name":"positive regulation of protein tetramer biosynthesis","type":"exact"},{"name":"positive regulation of protein tetramer biosynthetic process","type":"exact"},{"name":"positive regulation of protein tetramer formation","type":"exact"},{"name":"up regulation of protein tetramer assembly","type":"exact"},{"name":"up regulation of protein tetramer biosynthesis","type":"exact"},{"name":"up regulation of protein tetramer biosynthetic process","type":"exact"},{"name":"up regulation of protein tetramer formation","type":"exact"},{"name":"up regulation of protein tetramerization","type":"exact"},{"name":"up-regulation of protein tetramer assembly","type":"exact"},{"name":"up-regulation of protein tetramer biosynthesis","type":"exact"},{"name":"up-regulation of protein tetramer biosynthetic process","type":"exact"},{"name":"up-regulation of protein tetramer formation","type":"exact"},{"name":"up-regulation of protein tetramerization","type":"exact"},{"name":"upregulation of protein tetramer assembly","type":"exact"},{"name":"upregulation of protein tetramer biosynthesis","type":"exact"},{"name":"upregulation of protein tetramer biosynthetic process","type":"exact"},{"name":"upregulation of protein tetramer formation","type":"exact"},{"name":"upregulation of protein tetramerization","type":"exact"}],"termid":"GO:1901092"}


id: FYPO:0004867
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a lower extent than normal during a cellular response to ionizing radiation. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0002274","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H2A phosphorylation during cellular response to ionizing radiation","synonyms":[{"name":"decreased histone H2A phosphorylation during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"decreased histone H2A phosphorylation during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"reduced histone H2A phosphorylation during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0004867"}


id: GO:1905417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of amoeboid sperm motility.","definition_xrefs":["GOC:TermGenie","GOC:krc","GOC:cilia","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amoeboid sperm motility","termid":"GO:1905416"},{"relation_name":"is_a","term_name":"negative regulation of cell motility","termid":"GO:2000146"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"amoeboid sperm motility","termid":"GO:0097723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of amoeboid sperm motility","synonyms":[{"name":"down regulation of ameboid sperm motility","type":"exact"},{"name":"down regulation of ameboid sperm movement","type":"exact"},{"name":"down regulation of amoeboid sperm motility","type":"exact"},{"name":"down regulation of amoeboid sperm movement","type":"exact"},{"name":"down-regulation of ameboid sperm motility","type":"exact"},{"name":"down-regulation of ameboid sperm movement","type":"exact"},{"name":"down-regulation of amoeboid sperm motility","type":"exact"},{"name":"down-regulation of amoeboid sperm movement","type":"exact"},{"name":"downregulation of ameboid sperm motility","type":"exact"},{"name":"downregulation of ameboid sperm movement","type":"exact"},{"name":"downregulation of amoeboid sperm motility","type":"exact"},{"name":"downregulation of amoeboid sperm movement","type":"exact"},{"name":"inhibition of ameboid sperm motility","type":"narrow"},{"name":"inhibition of ameboid sperm movement","type":"narrow"},{"name":"inhibition of amoeboid sperm motility","type":"narrow"},{"name":"inhibition of amoeboid sperm movement","type":"narrow"},{"name":"negative regulation of ameboid sperm motility","type":"exact"},{"name":"negative regulation of ameboid sperm movement","type":"exact"},{"name":"negative regulation of amoeboid sperm movement","type":"exact"}],"termid":"GO:1905417"}


id: PBO:0039239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activated leukocyte cell adhesion molecule","termid":"PBO:0039239"}


id: PBO:0089424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane Haemolysin-III family protein involved in zinc homeostasis Izh3","termid":"PBO:0089424"}


id: PBO:0074242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 52 member 2","termid":"PBO:0074242"}


id: PR:A6X972
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gon7 gene.","definition_xrefs":["UniProtKB:A6X972","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS complex subunit gon7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.18","synonyms":[{"name":"Spom972h-gon7","type":"exact"}],"termid":"PR:A6X972"}


id: MONDO:0013418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial thoracic aortic aneurysm and aortic dissection","termid":"MONDO:0019625"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aortic aneurysm, familial thoracic 7","secondary_identifiers":["GARD:15706","MEDGEN:462427","OMIM:613780","UMLS:C3151077"],"synonyms":[{"name":"AAT7","type":"related"},{"name":"aortic aneurysm, familial thoracic 7","type":"exact"},{"name":"aortic aneurysm, familial thoracic type 7","type":"exact"},{"name":"aortic dissection, familial, with or without aortic aneurysm","type":"related"}],"termid":"MONDO:0013418","xrefs":{"Monarch":{"xref_id":"0013418"}}}


id: MONDO:1011125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Priapism that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"priapism, non-human animal","termid":"MONDO:1010280"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"priapism, dog","secondary_identifiers":["OMIA:001166-9615"],"termid":"MONDO:1011125","xrefs":{"Monarch":{"xref_id":"1011125"}}}


id: GO:0061714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining selectively with extracellular folic acid and delivering it into the cell via endocytosis.","definition_xrefs":["GOC:BHF","GOC:hal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor activity","termid":"GO:0038024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038024"}],"interesting_parent_ids":["GO:0038024","GO:0003674"],"is_obsolete":false,"name":"folic acid receptor activity","synonyms":[{"name":"folate receptor activity","type":"exact"}],"termid":"GO:0061714"}


id: PBO:0068627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 7, pseudogene","termid":"PBO:0068627"}


id: FYPO:0004089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of meiotic recombination is decreased during a zygotic meiotic nuclear division. Zygotic meiosis takes place immediately after conjugation and karyogamy, without intervening vegetative growth and division of diploid cells.","definition_xrefs":["PMID:11907273","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased meiotic recombination","termid":"FYPO:0000485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000293","FYPO:0000002"],"is_obsolete":false,"name":"decreased meiotic recombination during zygotic meiosis","synonyms":[{"name":"decreased meiotic recombination in zygotic nucleus","type":"exact"},{"name":"reduced meiotic recombination during zygotic meiosis","type":"exact"}],"termid":"FYPO:0004089"}


id: GO:0060266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of a phase of elevated metabolic activity, during which oxygen consumption increases made as a defense response ; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of innate immune response","termid":"GO:0045824"},{"relation_name":"is_a","term_name":"negative regulation of inflammatory response","termid":"GO:0050728"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of respiratory burst involved in inflammatory response","termid":"GO:0060264"},{"relation_name":"is_a","term_name":"negative regulation of respiratory burst","termid":"GO:0060268"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"negatively_regulates","term_name":"respiratory burst involved in inflammatory response","termid":"GO:0002536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of respiratory burst involved in inflammatory response","synonyms":[{"name":"negative regulation of respiratory burst involved in acute inflammatory response","type":"broad"}],"termid":"GO:0060266"}


id: MONDO:0002636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the accessory XI nerve.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"glossopharyngeal nerve disorder","termid":"MONDO:0002639"},{"relation_name":"is_a","term_name":"cranial nerve neuropathy","termid":"MONDO:0003569"},{"relation_name":"is_a","term_name":"peripheral nervous system disorder","termid":"MONDO:0003620"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"accessory nerve disorder","secondary_identifiers":["MESH:D020436","NCIT:C26953","SCTID:84759007","DOID:339","UMLS:C0152180","MEDGEN:57512","ICD9:352.4"],"synonyms":[{"name":"accessory XI nerve disease","type":"exact"},{"name":"accessory XI nerve disease or disorder","type":"exact"},{"name":"accessory nerve disorder","type":"exact"},{"name":"disease of accessory XI nerve","type":"exact"},{"name":"disease or disorder of accessory XI nerve","type":"exact"},{"name":"disorder of 11th nerve","type":"exact"},{"name":"disorder of accessory XI nerve","type":"exact"},{"name":"disorder of accessory [11th] nerve","type":"exact"},{"name":"disorder of accessory nerve","type":"exact"},{"name":"disorder of the 11th nerve","type":"exact"},{"name":"eleventh nerve disorder","type":"exact"}],"termid":"MONDO:0002636","xrefs":{"Monarch":{"xref_id":"0002636"}}}


id: PBO:0114316
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repeat containing","termid":"PBO:0114316"}


id: GO:1905708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the location, frequency, rate or extent of cell morphogenesis involved in conjugation with cellular fusion.","definition_xrefs":["GO_REF:0000058","PMID:23200991","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell morphogenesis","termid":"GO:0022604"},{"relation_name":"regulates","term_name":"cell morphogenesis involved in conjugation with cellular fusion","termid":"GO:0000753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell morphogenesis involved in conjugation with cellular fusion","synonyms":[{"name":"regulation of shmoo orientation","type":"narrow"},{"name":"regulation of shmooing","type":"narrow"}],"termid":"GO:1905708"}


id: PR:P31209
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pabp gene.","definition_xrefs":["UniProtKB:P31209","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyadenylate-binding protein, cytoplasmic and nuclear (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A7.04c","synonyms":[{"name":"PABP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pabp","type":"exact"},{"name":"poly(A)-binding protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"polyadenylate tail-binding protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P31209"}


id: MONDO:0001103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection of the small intestine caused by the flagellated protozoan giardia lamblia. It is spread via contaminated food and water and by direct person-to-person contact.","definition_xrefs":["MESH:D005873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protozoa infectious disease","termid":"MONDO:0002428"},{"relation_name":"is_a","term_name":"parasitic intestinal disorder","termid":"MONDO:0024270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"giardiasis","secondary_identifiers":["icd11.foundation:433310499","ICD9:007.1","SCTID:10679007","UMLS:C0017536","DOID:10718","MEDGEN:42213"],"synonyms":[{"name":"Giardia","type":"related"},{"name":"Giardia infection","type":"exact"},{"name":"Giardiases","type":"related"},{"name":"Lambliases","type":"related"},{"name":"beaver feaver","type":"exact"},{"name":"infection by Giardia lamblia","type":"exact"},{"name":"infections, Giardia","type":"related"},{"name":"lambliasis","type":"related"}],"termid":"MONDO:0001103","xrefs":{"Monarch":{"xref_id":"0001103"}}}


id: PBO:0051381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 6D-41 (non-functional)","termid":"PBO:0051381"}


id: PBO:0076311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYNJ2 intronic transcript 1","termid":"PBO:0076311"}


id: MONDO:0008690
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"xeroderma pigmentosum","termid":"MONDO:0019600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0021190"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021190","MONDO:0005093"],"is_obsolete":false,"name":"xeroderma pigmentosum, autosomal dominant, mild","secondary_identifiers":["OMIM:194400","UMLS:C1860231","MEDGEN:395440","MESH:C565989"],"synonyms":[{"name":"xeroderma pigmentosum, autosomal dominant, mild","type":"exact"}],"termid":"MONDO:0008690","xrefs":{"Monarch":{"xref_id":"0008690"}}}


id: PBO:0027980
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_glutathione_disulfide_oxidoreductase_activity","termid":"PBO:0027980"}


id: PBO:0083576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps YDR134C","termid":"PBO:0083576"}


id: PBO:0047199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 216 member B","termid":"PBO:0047199"}


id: MONDO:0957247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"congenital myopathy 22A, classic","secondary_identifiers":["DOID:0081354","UMLS:C5830453","OMIM:620351","MEDGEN:1841089"],"termid":"MONDO:0957247","xrefs":{"Monarch":{"xref_id":"0957247"}}}


id: PBO:0051671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of growth family member 2","termid":"PBO:0051671"}


id: GO:0070830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a tight junction, an occluding cell-cell junction that is composed of a branching network of sealing strands that completely encircles the apical end of each cell in an epithelial sheet.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tight junction assembly","termid":"GO:0120192"},{"relation_name":"part_of","term_name":"apical junction assembly","termid":"GO:0043297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"bicellular tight junction assembly","secondary_identifiers":["Reactome:R-HSA-420029"],"synonyms":[{"name":"tight junction formation","type":"exact"}],"termid":"GO:0070830"}


id: PBO:0074141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member B1","termid":"PBO:0074141"}


id: PBO:0068534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 136, pseudogene","termid":"PBO:0068534"}


id: GO:0006210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of thymine, 5-methyluracil, one of the two major pyrimidine bases present (as thymidine) in DNA but not found in RNA other than (as ribothymidine) in transfer RNA, where it is a minor base.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase catabolic process","termid":"GO:0006208"},{"relation_name":"is_a","term_name":"thymine metabolic process","termid":"GO:0019859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"thymine catabolic process","synonyms":[{"name":"thymine breakdown","type":"exact"},{"name":"thymine catabolism","type":"exact"},{"name":"thymine degradation","type":"exact"}],"termid":"GO:0006210"}


id: MONDO:0044877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, immune-mediated disorder characterized by cerebellar degeneration due to the presence of an often undetected malignancy (usually carcinoma or lymphoma) in an anatomic site other than the cerebellum. Signs and symptoms include progressive ataxia, dysarthria, and nystagmus.","definition_xrefs":["NCIT:C4685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paraneoplastic neurologic syndrome","termid":"MONDO:0018215"},{"relation_name":"is_a","term_name":"cerebellar degeneration","termid":"MONDO:0022687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"paraneoplastic cerebellar degeneration","secondary_identifiers":["icd11.foundation:1087616692","MEDGEN:98273","UMLS:C0393534","MESH:D020362","Orphanet:623626","GARD:22493"],"synonyms":[{"name":"paraneoplastic cerebellar degeneration","type":"exact"}],"termid":"MONDO:0044877","xrefs":{"Monarch":{"xref_id":"0044877"}}}


id: PBO:0056905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIF4GD divergent transcript","termid":"PBO:0056905"}


id: MONDO:0009819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete idiopathic juvenile osteoporosis (obsolete MONDO:0009819)","termid":"MONDO:0009819","xrefs":{"Monarch":{"xref_id":"0009819"}}}


id: PBO:0048375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated RAB2 interactor 1A","termid":"PBO:0048375"}


id: GO:0160150
data:
  {"annotated_genes":["SJAG_03572"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105724],"is_not":false,"summary":null,"term":"GO:0160150"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(13) in tRNA = pseudouridine(13) in tRNA.","definition_xrefs":["EC:5.4.99.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA pseudouridine synthase activity","termid":"GO:0106029"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03572":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0140098","GO:0003674","GO:0003824","GO:0016853","GO:0140101"],"is_obsolete":false,"name":"tRNA pseudouridine(13) synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:42540"],"termid":"GO:0160150","terms_by_termid":{"GO:0160150":null}}


id: GO:0005584
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen trimer containing alpha(I) chains. The most common form of type I collagen is a heterotrimer containing two alpha1(I) chains and one alpha2(I) chain; homotrimers containing three alpha1(I) chains are also found. Type I collagen triple helices associate to form banded fibrils.","definition_xrefs":["GOC:sl","GOC:mah","ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibrillar collagen trimer","termid":"GO:0005583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type I trimer","secondary_identifiers":["Wikipedia:Collagen_type_I"],"termid":"GO:0005584"}


id: PBO:0002656
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DiGeorge syndrome","termid":"PBO:0002656"}


id: GO:0031680
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The heterodimer formed by the beta and gamma subunits of a heterotrimeric G protein, which dissociates from the alpha subunit upon guanine nuclotide exchange.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"G-protein beta/gamma-subunit complex","synonyms":[{"name":"G-beta/G-gamma complex","type":"exact"},{"name":"heterotrimeric G-protein GTPase, beta-subunit","type":"narrow"}],"termid":"GO:0031680"}


