# terms

id: GO:0043521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the disassembly of a bipolar filament composed of myosin II molecules.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex disassembly","termid":"GO:0043244"},{"relation_name":"is_a","term_name":"regulation of myosin II filament organization","termid":"GO:0043519"},{"relation_name":"regulates","term_name":"myosin II filament disassembly","termid":"GO:0031037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0030036","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"regulation of myosin II filament disassembly","termid":"GO:0043521"}


id: PBO:0001271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCK subfamily","termid":"PBO:0001271"}


id: GO:0042393
data:
  {"annotated_genes":["SJAG_02513","SJAG_03161","SJAG_01653","SJAG_04097","SJAG_02314","SJAG_00837","SJAG_04547","SJAG_03128","SJAG_03982","SJAG_03366","SJAG_03867","SJAG_02589","SJAG_02701","SJAG_00942","SJAG_03230","SJAG_02439","SJAG_03628","SJAG_04755","SJAG_00591","SJAG_01325","SJAG_03916","SJAG_00439","SJAG_02447","SJAG_02872","SJAG_04758","SJAG_02571","SJAG_00676","SJAG_05313","SJAG_00735","SJAG_04670","SJAG_02500","SJAG_02625","SJAG_04038","SJAG_05252","SJAG_04721","SJAG_00170","SJAG_04396","SJAG_00184"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57388,58100,59624,60902,60910,69368,69393,69469,71094,71264,71885,72796,73494,73685,73993,74372,75305,77016,77274,78262,78493,78946,79396,79549,79822,79891,118862,118863,118864,118865],"is_not":false,"summary":null,"term":"GO:0042393"},{"annotations":[76611,78293,78507,70137,74814,79519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070577"},{"annotations":[75544,78523,78201,76691,77986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035064"}]},"cv_name":"molecular_function","definition":"Binding to a histone, any of a group of water-soluble proteins found in association with the DNA of eukaryotic or archaeal chromosomes. They are involved in the condensation and coiling of chromosomes during cell division and have also been implicated in gene regulation and DNA replication. They may be chemically modified (methylated, acetlyated and others) to regulate gene transcription.","definition_xrefs":["PMID:9305837","PMID:30212449","GOC:jl","PMID:16209651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00170":null,"SJAG_00184":null,"SJAG_00303":null,"SJAG_00439":null,"SJAG_00591":null,"SJAG_00676":null,"SJAG_00735":null,"SJAG_00837":null,"SJAG_00942":null,"SJAG_01325":null,"SJAG_01653":null,"SJAG_02314":null,"SJAG_02439":null,"SJAG_02447":null,"SJAG_02500":null,"SJAG_02513":null,"SJAG_02571":null,"SJAG_02589":null,"SJAG_02625":null,"SJAG_02701":null,"SJAG_02872":null,"SJAG_03128":null,"SJAG_03161":null,"SJAG_03230":null,"SJAG_03366":null,"SJAG_03542":null,"SJAG_03628":null,"SJAG_03867":null,"SJAG_03916":null,"SJAG_03982":null,"SJAG_04038":null,"SJAG_04097":null,"SJAG_04396":null,"SJAG_04547":null,"SJAG_04670":null,"SJAG_04721":null,"SJAG_04755":null,"SJAG_04758":null,"SJAG_05252":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"histone binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"PMID:26343758":null},"synonyms":[{"name":"histone-specific chaperone activity","type":"related"}],"termid":"GO:0042393","terms_by_termid":{"GO:0035064":null,"GO:0042393":null,"GO:0070577":null}}


id: GO:0004622
data:
  {"annotated_genes":["SJAG_03204","SJAG_02093","SJAG_02100","SJAG_02091","SJAG_01198","SJAG_04110"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89599,91366,91374,93405,100313,102478,113557,114254,116473],"is_not":false,"summary":null,"term":"GO:0004622"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1-acyl-sn-glycero-3-phosphocholine + H2O = a fatty acid + H+ + sn-glycerol 3-phosphocholine.","definition_xrefs":["EC:3.1.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activity","termid":"GO:0004620"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01198":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02100":null,"SJAG_03204":null,"SJAG_04110":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"lysophospholipase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1482629","Reactome:R-HSA-6814766","RHEA:15177","Reactome:R-HSA-1482612","Reactome:R-HSA-1482545","Reactome:R-HSA-1482685","Reactome:R-HSA-1482571","Reactome:R-HSA-6814778","Reactome:R-HSA-8847912","Reactome:R-HSA-1482696","GO:0045126","Reactome:R-HSA-6814254","MetaCyc:LYSOPHOSPHOLIPASE-RXN"],"synonyms":[{"name":"2-lysophosphatidylcholine acylhydrolase activity","type":"related"},{"name":"lecithinase B activity","type":"related"},{"name":"lecitholipase activity","type":"related"},{"name":"lysolecithinase activity","type":"related"},{"name":"lysophopholipase L2","type":"related"},{"name":"lysophosphatidase activity","type":"related"},{"name":"lysophosphatidylcholine hydrolase activity","type":"related"},{"name":"lysophospholipase A1","type":"related"},{"name":"phosphatidase B","type":"related"},{"name":"phospholipase B activity","type":"related"}],"termid":"GO:0004622","terms_by_termid":{"GO:0004622":null}}


id: GO:0060910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of initiation of plasmid DNA replication that contributes to copy number maintenance.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated DNA replication initiation","termid":"GO:0032297"},{"relation_name":"is_a","term_name":"regulation of DNA replication initiation involved in plasmid copy number maintenance","termid":"GO:0060909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006260"],"is_obsolete":false,"name":"negative regulation of DNA replication initiation involved in plasmid copy number maintenance","termid":"GO:0060910"}


id: PBO:0000769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Methionine","termid":"PBO:0000769"}


id: GO:1900559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of austinol.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"austinol metabolic process","termid":"GO:1900558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"austinol catabolic process","synonyms":[{"name":"austinol breakdown","type":"exact"},{"name":"austinol catabolism","type":"exact"},{"name":"austinol degradation","type":"exact"}],"termid":"GO:1900559"}


id: GO:0030404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Was not defined before being made obsolete.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete collagenase 3 activity (obsolete GO:0030404)","synonyms":[{"name":"MMP-13","type":"exact"},{"name":"collagenase 3 activity","type":"exact"},{"name":"matrix metalloproteinase 13","type":"exact"}],"termid":"GO:0030404"}


id: MONDO:0012745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the TNNC1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1Z","secondary_identifiers":["GARD:15531","MEDGEN:395631","OMIM:611879","DOID:0110434","MESH:C567506","UMLS:C2678475"],"synonyms":[{"name":"CMD1Z","type":"exact"},{"name":"TNNC1 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1Z","type":"related"},{"name":"cardiomyopathy, dilated, type 1Z","type":"exact"},{"name":"dilated cardiomyopathy type 1Z","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in TNNC1","type":"exact"}],"termid":"MONDO:0012745","xrefs":{"Monarch":{"xref_id":"0012745"}}}


id: GO:0017001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"antibiotic metabolic process","termid":"GO:0016999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antibiotic catabolic process","synonyms":[{"name":"antibiotic breakdown","type":"exact"},{"name":"antibiotic catabolism","type":"exact"},{"name":"antibiotic degradation","type":"exact"}],"termid":"GO:0017001"}


id: MONDO:0008974
data:
  {"annotated_genes":["SJAG_04810"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85546],"is_not":false,"summary":null,"term":"MONDO:0008974"}]},"cv_name":"mondo","definition":"A very rare lethal skeletal dysplasia characterized by fetal hydrops, short limbs and abnormal chondro-osseous calcification. The disease is characterized by early in utero lethality and affected fetuses are considered as nonviable.","definition_xrefs":["Orphanet:1426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol biosynthesis disorder","termid":"MONDO:0019240"},{"relation_name":"is_a","term_name":"chondrodysplasia punctata","termid":"MONDO:0019701"},{"relation_name":"is_a","term_name":"laminopathy","termid":"MONDO:0021106"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04810":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"Greenberg dysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2201361","SCTID:389261002","UMLS:C2931048","DOID:0111588","MESH:C535858","icd11.foundation:1858458540","MEDGEN:418969","GARD:8754","OMIM:215140"],"synonyms":[{"name":"GRBGD","type":"related"},{"name":"Greenberg dysplasia","type":"exact"},{"name":"Greenberg skeletal dysplasia","type":"related"},{"name":"autosomal recessive lethal chondrodystrophy with congenital hydrops","type":"related"},{"name":"chondrodystrophy, hydropic and prenatally lethal type","type":"related"},{"name":"hem","type":"related"},{"name":"hem dysplasia","type":"exact"},{"name":"hem skeletal dysplasia","type":"related"},{"name":"hem/Greenberg dysplasia","type":"related"},{"name":"hydrops, ectopic calcification, moth-eaten skeletal dysplasia","type":"related"},{"name":"hydrops-ectopic calcification-moth-eaten skeletal dysplasia","type":"related"},{"name":"hydrops-ectopic calcification-motheaten syndrome","type":"exact"},{"name":"moth-eaten skeletal dysplasia","type":"related"},{"name":"skeletal dysplasia, Greenberg type","type":"exact"}],"termid":"MONDO:0008974","terms_by_termid":{"MONDO:0008974":null},"xrefs":{"Monarch":{"xref_id":"0008974"}}}


id: PBO:0027084
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_mitotic_spindle_midzone_during_anaphase_B","termid":"PBO:0027084"}


id: MONDO:0009333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mullerian derivatives-lymphangiectasia-polydactyly syndrome is characterized by prenatal linear growth deficiency, hypertrophied alveolar ridges, redundant nuchal skin, postaxial polydactyly and cryptorchidism. Mullerian duct remnants, lymphangiectasis, and renal anomalies are also present. Three cases have been described. A small penis was observed in two of these cases. The syndrome is likely to be an autosomal recessive or X-linked trait. All the reported patients died neonatally of hepatic failure.","definition_xrefs":["Orphanet:1655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"primary lymphedema","termid":"MONDO:0019175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"mullerian derivatives-lymphangiectasia-polydactyly syndrome","secondary_identifiers":["GARD:5430","MESH:C536478","UMLS:C1856159","MEDGEN:343489","OMIM:235255"],"synonyms":[{"name":"MULLERIAN derivatives, persistence of, with lymphangiectasia and postaxial polydactyly","type":"related"},{"name":"Müllerian derivatives-lymphangiectasia-polydactyly syndrome","type":"related"},{"name":"Urioste syndrome","type":"related"},{"name":"persistence of mullerian derivatives with lymphangiectasia and postaxial polydactyly","type":"related"},{"name":"renal and craniofacial anomalies with persistence of mullerian derivatives, lymphangiectasis, hepatic failure, postaxial polydactyly","type":"related"}],"termid":"MONDO:0009333","xrefs":{"Monarch":{"xref_id":"0009333"}}}


id: PATO:0000010
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000010 relative speed (obsolete PATO:0000010)","termid":"PATO:0000010"}


id: GO:0048358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the pectin component of mucilage.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pectin biosynthetic process","termid":"GO:0045489"},{"relation_name":"is_a","term_name":"mucilage pectin metabolic process","termid":"GO:0048363"},{"relation_name":"part_of","term_name":"mucilage biosynthetic process","termid":"GO:0010192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"mucilage pectin biosynthetic process","synonyms":[{"name":"mucilage pectin anabolism","type":"exact"},{"name":"mucilage pectin biosynthesis","type":"exact"},{"name":"mucilage pectin formation","type":"exact"},{"name":"mucilage pectin synthesis","type":"exact"}],"termid":"GO:0048358"}


id: PBO:0045112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dentin matrix acidic phosphoprotein 1","termid":"PBO:0045112"}


id: GO:0016566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity that stops or downregulates transcription of specific genes or sets of genes.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete specific transcriptional repressor activity (obsolete GO:0016566)","synonyms":[{"name":"specific transcriptional repressor activity","type":"exact"}],"termid":"GO:0016566"}


id: PBO:0061860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligodendrocyte transcription factor 1","termid":"PBO:0061860"}


id: GO:0009110
data:
  {"annotated_genes":["SJAG_05200","SJAG_02360","SJAG_00491","SJAG_04845","SJAG_02420","SJAG_00381","SJAG_04067","SJAG_00691","SJAG_00480","SJAG_01126","SJAG_00106","SJAG_02421","SJAG_01970","SJAG_01935","SJAG_00707","SJAG_02408","SJAG_00376","SJAG_00827","SJAG_00043","SJAG_03275","SJAG_03632","SJAG_04866","SJAG_02225","SJAG_01543","SJAG_02406","SJAG_04711","SJAG_03679","SJAG_00673","SJAG_00815","SJAG_04481","SJAG_00283","SJAG_01054","SJAG_04282","SJAG_01383","SJAG_03362","SJAG_04156","SJAG_01881","SJAG_02491","SJAG_00252","SJAG_03538"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[113595,75735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009102"},{"annotations":[104284,89779,104432,105571,111903,113172,107832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046656"},{"annotations":[112865,88367,98240,98236,102256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015940"},{"annotations":[88514,113177],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[99189,115193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[113885,100369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042821"},{"annotations":[87198,94980,63766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042823"},{"annotations":[111318],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"},{"annotations":[87200,94981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008615"},{"annotations":[100645,86949,109871,114272,106466,115227,106273,116667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009231"},{"annotations":[115517,113090,93777,113084,106867,99024,113501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[113085,113502,113091,99025,93778,115518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009229"},{"annotations":[109939,99027,109940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a vitamin, one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin metabolic process","termid":"GO:0006766"},{"relation_name":"is_a","term_name":"small molecule biosynthetic process","termid":"GO:0044283"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_00106":null,"SJAG_00252":null,"SJAG_00283":null,"SJAG_00376":null,"SJAG_00381":null,"SJAG_00480":null,"SJAG_00491":null,"SJAG_00673":null,"SJAG_00691":null,"SJAG_00707":null,"SJAG_00815":null,"SJAG_00827":null,"SJAG_01054":null,"SJAG_01126":null,"SJAG_01383":null,"SJAG_01543":null,"SJAG_01881":null,"SJAG_01935":null,"SJAG_01970":null,"SJAG_02225":null,"SJAG_02360":null,"SJAG_02406":null,"SJAG_02408":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_02491":null,"SJAG_03275":null,"SJAG_03362":null,"SJAG_03538":null,"SJAG_03632":null,"SJAG_03679":null,"SJAG_04067":null,"SJAG_04156":null,"SJAG_04282":null,"SJAG_04481":null,"SJAG_04711":null,"SJAG_04845":null,"SJAG_04866":null,"SJAG_05200":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006766"],"is_obsolete":false,"name":"vitamin biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"vitamin anabolism","type":"exact"},{"name":"vitamin biosynthesis","type":"exact"},{"name":"vitamin formation","type":"exact"},{"name":"vitamin synthesis","type":"exact"}],"termid":"GO:0009110","terms_by_termid":{"GO:0008615":null,"GO:0009102":null,"GO:0009228":null,"GO:0009229":null,"GO:0009231":null,"GO:0009443":null,"GO:0010144":null,"GO:0015940":null,"GO:0036001":null,"GO:0036172":null,"GO:0042821":null,"GO:0042823":null,"GO:0046656":null,"GO:0090180":null}}


id: PBO:0049728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 8 pseudogene 1","termid":"PBO:0049728"}


id: PBO:0069043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 288, pseudogene","termid":"PBO:0069043"}


id: PBO:0002219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein Rad50","termid":"PBO:0002219"}


id: PBO:0057935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3661","termid":"PBO:0057935"}


id: MONDO:0004930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glaucoma","termid":"MONDO:0005041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"steroid-induced glaucoma","secondary_identifiers":["SCTID:1654001","DOID:9946","MEDGEN:573238","UMLS:C0339578","ICD9:365.3","ICD9:365.89"],"synonyms":[{"name":"corticosteroid-induced glaucoma","type":"exact"}],"termid":"MONDO:0004930","xrefs":{"Monarch":{"xref_id":"0004930"}}}


id: GO:1902558
data:
  {"annotated_genes":["SJAG_03334"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"}]},"cv_name":"biological_process","definition":"The process in which 5'-adenylyl sulfate is transported across a membrane.","definition_xrefs":["GOC:TermGenie","PMID:24296033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"purine ribonucleotide transport","termid":"GO:0015868"},{"relation_name":"is_a","term_name":"adenine nucleotide transport","termid":"GO:0051503"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"},{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transport","termid":"GO:1901679"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"5'-adenylyl sulfate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adenosine 5'-phosphosulfate transmembrane transport","type":"exact"}],"termid":"GO:1902558","terms_by_termid":{"GO:1990553":null}}


id: PBO:0088148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar transporter that mediates zinc transport into the vacuole; overexpression confers resistance to cobalt and rhodium; protein abundance increases in response to DNA replication stress; COT1 has a paralog, ZRC1, that arose from the whole genome duplication","termid":"PBO:0088148"}


id: PBO:0083192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified essential gene RPT1; identified by expression profiling and mass spectrometry","termid":"PBO:0083192"}


id: GO:1903195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of L-dopa biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:TermGenie","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of amino acid biosynthetic process","termid":"GO:2000282"},{"relation_name":"regulates","term_name":"L-dopa biosynthetic process","termid":"GO:1903185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"regulation of L-dopa biosynthetic process","synonyms":[{"name":"regulation of L-dopa anabolism","type":"exact"},{"name":"regulation of L-dopa biosynthesis","type":"exact"},{"name":"regulation of L-dopa formation","type":"exact"},{"name":"regulation of L-dopa synthesis","type":"exact"}],"termid":"GO:1903195"}


id: PBO:0086376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ATPase containing the DEAD/H helicase-related sequence motif; null mutant displays increased levels of spontaneous Rad52p foci; SWAT-GFP and mCherry fusion proteins localize to the nucleus","termid":"PBO:0086376"}


id: PBO:0063278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily A, 4","termid":"PBO:0063278"}


id: PATO:0000292
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000292 mobility value (obsolete PATO:0000292)","termid":"PATO:0000292"}


id: PBO:0047919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(10)(q22.1)","termid":"PBO:0047919"}


id: MONDO:0013092
data:
  {"annotated_genes":["SJAG_03131"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86780],"is_not":false,"summary":null,"term":"MONDO:0013092"}]},"cv_name":"mondo","definition":"Any malignant glioma in which the cause of the disease is a mutation in the PTEN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glioma susceptibility","termid":"MONDO:0100242"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03131":null},"genotype_count":0,"is_obsolete":false,"name":"glioma susceptibility 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:414431","OMIM:613028","UMLS:C2751642"],"synonyms":[{"name":"GLM2","type":"related"},{"name":"PTEN malignant glioma","type":"exact"},{"name":"glioma susceptibility 2","type":"exact"},{"name":"glioma susceptibility type 2","type":"exact"},{"name":"malignant glioma caused by mutation in PTEN","type":"exact"}],"termid":"MONDO:0013092","terms_by_termid":{"MONDO:0013092":null},"xrefs":{"Monarch":{"xref_id":"0013092"}}}


id: GO:0010171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the soma are generated and organized.","definition_xrefs":["GOC:ems","ISBN:0140512888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"body morphogenesis","termid":"GO:0010171"}


id: GO:0090015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of leaflet formation as a result of the series of molecular signals generated in response to detection of auxin.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin-activated signaling pathway","termid":"GO:0009734"},{"relation_name":"is_a","term_name":"regulation of leaflet formation","termid":"GO:0090016"},{"relation_name":"is_a","term_name":"positive regulation of leaf development","termid":"GO:1905623"},{"relation_name":"positively_regulates","term_name":"leaflet formation","termid":"GO:0090014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of leaflet formation by auxin mediated signaling pathway","synonyms":[{"name":"positive regulation of leaflet formation by auxin mediated signalling pathway","type":"exact"}],"termid":"GO:0090015"}


id: GO:0060330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a response to type II interferon (interferon-gamma). Response to interferon gamma is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"is_a","term_name":"regulation of response to cytokine stimulus","termid":"GO:0060759"},{"relation_name":"regulates","term_name":"response to type II interferon","termid":"GO:0034341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to type II interferon","synonyms":[{"name":"regulation of response to gamma-interferon","type":"related"},{"name":"regulation of response to immune interferon","type":"exact"},{"name":"regulation of response to interferon-gamma","type":"broad"},{"name":"regulation of response to type II IFN","type":"exact"}],"termid":"GO:0060330"}


id: PBO:0082368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basic helix-loop-helix (bHLH) protein; forms homodimer to bind E-box consensus sequence CACGTG present at MET gene promoters and centromere DNA element I (CDEI); affects nucleosome positioning at this motif; associates with other transcription factors such as Met4p and Isw1p to mediate transcriptional activation or repression; associates with kinetochore proteins, required for chromosome segregation; protein abundance increases in response to DNA replication stress","termid":"PBO:0082368"}


id: PBO:0054986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2400","termid":"PBO:0054986"}


id: PBO:0068214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 521","termid":"PBO:0068214"}


id: PR:O60091
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl24 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L24, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.10","synonyms":[{"name":"Spom972h-mrpl24","type":"exact"}],"termid":"PR:O60091"}


id: MOD:01587
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(2-aminoethylphosphoryl)-L-serine.","definition_xrefs":["PubMed:16825186","PubMed:15249686","PubMed:16949362","RESID:AA0497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(2-aminoethylphosphoryl)-L-serine","synonyms":[{"name":"(2S)-2-amino-3-([(2-aminoethoxy)(hydroxy)phosphoryl]oxy)propanoic acid","type":"exact"},{"name":"MOD_RES O-(2-aminoethylphosphoryl)serine","type":"exact"},{"name":"O-(2-aminoethylphosphoryl)-L-serine","type":"exact"},{"name":"O3-(2-aminoethylphosphoryl)-L-serine","type":"exact"},{"name":"O3-(phosphoethanolamine)-L-serine","type":"exact"},{"name":"serine ethanolamine phosphate","type":"exact"},{"name":"serine ethanolamine phosphodiester","type":"exact"}],"termid":"MOD:01587"}


id: MONDO:0001364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"astigmatism","termid":"MONDO:0011284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"regular astigmatism","secondary_identifiers":["UMLS:C0152193","ICD9:367.21","DOID:11781","icd11.foundation:879600754","MEDGEN:508921","SCTID:68905002"],"termid":"MONDO:0001364","xrefs":{"Monarch":{"xref_id":"0001364"}}}


id: PBO:0051481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (VI)-22-1 (pseudogene)","termid":"PBO:0051481"}


id: GO:0016356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete organophosphorus susceptibility/resistance (obsolete GO:0016356)","synonyms":[{"name":"organophosphorus susceptibility/resistance","type":"exact"}],"termid":"GO:0016356"}


id: PBO:0089493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ell binding protein Ebp1","termid":"PBO:0089493"}


id: MONDO:0014906
data:
  {"annotated_genes":["SJAG_00031"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85628],"is_not":false,"summary":null,"term":"MONDO:0014906"}]},"cv_name":"mondo","definition":"An autosomal recessive sub-type of Charcot-Marie-Tooth disease caused by compound heterozygous or homozygous mutation(s) in the MFN2 gene, encoding mitofusin-2. This condition is more severe and has an earlier onset as compared to Charcot-Marie-Tooth disease type 2A2A.","definition_xrefs":["NCIT:C150647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease","termid":"MONDO:0015626"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00031":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease, axonal, autosomal recessive, type 2a2b;","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:934692","OMIM:617087","UMLS:C4310725","DOID:0111557"],"synonyms":[{"name":"CMT2A2B","type":"related"},{"name":"Charcot-Marie-Tooth disease type 2A2B","type":"exact"},{"name":"Charcot-Marie-Tooth disease, axonal, autosomal recessive, type 2A2B","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2A2B","type":"exact"}],"termid":"MONDO:0014906","terms_by_termid":{"MONDO:0014906":null},"xrefs":{"Monarch":{"xref_id":"0014906"}}}


id: GO:0015323
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete type V protein secretor activity (obsolete GO:0015323)","synonyms":[{"name":"type V protein secretor activity","type":"exact"}],"termid":"GO:0015323"}


id: MOD:01975
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(poly-3-hydroxybutyrate)-L-cysteine.","definition_xrefs":["PubMed:9888824","RESID:AA0617","PubMed:19711985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acylated residue","termid":"MOD:00672"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-poly(3-hydroxybutyrate)-L-cysteine","synonyms":[{"name":"(alpha)-([(2R)-2-amino-2-carboxyethyl]sulfanyl)-(omega)-[(3R)-3-hydroxybutanoyl]-poly([(3R)-3-methyl-1-oxopropane-1,3-diyl]oxy)","type":"exact"},{"name":"MOD_RES S-poly(beta-hydroxybutyryl)lysine","type":"exact"},{"name":"S-poly(3-hydroxybutanoate)cysteine","type":"exact"},{"name":"S-poly(3-hydroxybutanoic acid)cysteine","type":"exact"},{"name":"S-poly(3-hydroxybutyrate)-L-cysteine","type":"exact"},{"name":"S-poly(3-hydroxybutyrate)cysteine","type":"exact"},{"name":"S-poly(3-hydroxybutyric acid)cysteine","type":"exact"},{"name":"S-poly(beta-hydroxybutyrate)cysteine","type":"exact"},{"name":"S-poly[(R)-3-hydroxybutyrate]cysteine","type":"exact"}],"termid":"MOD:01975"}


id: MONDO:0009861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Phenylketonuria (PKU) is the most common inborn error of amino acid metabolism and is characterized by mild to severe mental disability in untreated patients.","definition_xrefs":["Orphanet:716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"disorder of phenylalanine metabolism","termid":"MONDO:0017306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0004736"],"is_obsolete":false,"name":"phenylketonuria","secondary_identifiers":["icd11.foundation:444122923","NANDO:1200785","SCTID:7573000","NANDO:2200467","MEDGEN:19244","MedDRA:10034872","GARD:7383","NORD:1574","MESH:D010661","UMLS:C0031485","NCIT:C81315","ICD9:270.1","NANDO:2201075","OMIM:261600","DOID:9281","NANDO:1200784"],"synonyms":[{"name":"HPA, non-PKU mild","type":"related"},{"name":"PAH deficiency","type":"exact"},{"name":"PKU","type":"exact"},{"name":"hyperphenylalaninemia, non-PKU mild","type":"exact"},{"name":"imbecilitus phenylpyruvica","type":"related"},{"name":"oligophrenia Phenylpyruvica","type":"related"},{"name":"oligophrenia phenylpyruvica","type":"related"},{"name":"phenylalanine hydroxylase deficiency","type":"exact"},{"name":"phenylalaninemia","type":"exact"},{"name":"phenylketonuria","type":"exact"},{"name":"phenylketonuria, maternal","type":"related"},{"name":"phenylpyruvic oligophrenia","type":"related"}],"termid":"MONDO:0009861","xrefs":{"Monarch":{"xref_id":"0009861"}}}


id: PBO:0028855
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_glucose_starvation","termid":"PBO:0028855"}


id: FYPO:0007581
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septation initiation network signaling occurs to a lower extent than normal during anaphase B of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:19736319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septation initiation network signaling","termid":"FYPO:0007569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000298"],"is_obsolete":false,"name":"decreased septation initiation network signaling during anaphase B","synonyms":[{"name":"decreased SIN signaling during anaphase B","type":"exact"},{"name":"decreased septation initiation network signaling during mitotic anaphase B","type":"exact"},{"name":"decreased septation initiation network signalling during anaphase B","type":"exact"},{"name":"decreased septation initiation signaling during anaphase B","type":"exact"},{"name":"reduced septation initiation network signaling during anaphase B","type":"exact"}],"termid":"FYPO:0007581"}


id: PBO:0066585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member B","termid":"PBO:0066585"}


id: PBO:0060537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase domain containing 1","termid":"PBO:0060537"}


id: PBO:0003921
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates mfm1","termid":"PBO:0003921"}


id: GO:0097295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of morphine, 17-methyl-7,8-didehydro-4,5alpha-epoxymorphinan-3,6alpha-diol. Morphine is a highly potent opiate analgesic psychoactive drug obtained form the opium poppy, Papaver somniferum.","definition_xrefs":["GOC:yaf","PMID:19567876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoquinoline alkaloid biosynthetic process","termid":"GO:0033075"},{"relation_name":"is_a","term_name":"morphine metabolic process","termid":"GO:0071272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"morphine biosynthetic process","synonyms":[{"name":"morphine anabolism","type":"exact"},{"name":"morphine biosynthesis","type":"exact"},{"name":"morphine formation","type":"exact"},{"name":"morphine synthesis","type":"exact"}],"termid":"GO:0097295"}


id: GO:0031781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 3 melanocortin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocortin receptor binding","termid":"GO:0031779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type 3 melanocortin receptor binding","synonyms":[{"name":"type 3 melanocortin receptor ligand","type":"narrow"}],"termid":"GO:0031781"}


id: GO:0047409
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + 1-(1-alkenyl)-sn-glycero-3-phosphoethanolamine = sn-glycero-3-phosphoethanolamine + an aldehyde.","definition_xrefs":["EC:3.3.2.5","MetaCyc:3.3.2.5-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete alkenylglycerophosphoethanolamine hydrolase activity (obsolete GO:0047409)","synonyms":[{"name":"1-(1-alkenyl)-sn-glycero-3-phosphoethanolamine aldehydohydrolase activity","type":"related"}],"termid":"GO:0047409"}


id: GO:0110159
data:
  {"annotated_genes":["SJAG_02332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the cell cycle process in which the distance is lengthened between poles of the mitotic spindle during mitotic prophase (spindle phase one).","definition_xrefs":["PMID:27697865","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic spindle assembly","termid":"GO:1901673"},{"relation_name":"part_of","term_name":"regulation of mitotic spindle elongation","termid":"GO:0032888"},{"relation_name":"regulates","term_name":"mitotic spindle formation (spindle phase one)","termid":"GO:0061804"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007010","GO:0007049","GO:0000226","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of mitotic spindle formation (spindle phase one)","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110159","terms_by_termid":{"GO:0110161":null}}


id: GO:0035447
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol-2-(L-cysteinylamido)-2-deoxy-alpha-D-glucopyranoside + acetyl-CoA = mycothiol + coA + H+. Mycothiol is also known as AcCys-GlcN-Ins and 1-D-myo-inosityl-2-L-cysteinylamido-2-deoxy-alpha-D-glucopyranoside as Cys-GlcN-Ins or desacetylmycothiol.","definition_xrefs":["PMID:12033919","EC:2.3.1.189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"mycothiol synthase activity","secondary_identifiers":["RHEA:26172","MetaCyc:RXN1G-4"],"synonyms":[{"name":"acetyl-CoA:Cys-GlcN-Ins acetyltransferase","type":"exact"}],"termid":"GO:0035447"}


id: PBO:0085568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein expressed during sporulation; SPS2 has a paralog, SPS22, that arose from the whole genome duplication; redundant with Sps22p for organization of the beta-glucan layer of the spore wall; S. pombe ortholog is a spore wall component","termid":"PBO:0085568"}


id: MONDO:0020624
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood group--waldner type (obsolete MONDO:0020624)","secondary_identifiers":["OMIM:112010"],"synonyms":[{"name":"BLOOD GROUP--WALDNER TYPE","type":"related"},{"name":"WD","type":"related"},{"name":"Waldner Blood Group Antigen","type":"related"},{"name":"blood group, Waldner","type":"exact"}],"termid":"MONDO:0020624","xrefs":{"Monarch":{"xref_id":"0020624"}}}


id: PBO:0005006
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cullin-associated Methyltransferase complex subunit","termid":"PBO:0005006"}


id: PBO:0071261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23 pseudogene 6","termid":"PBO:0071261"}


id: GO:0150189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of interleukin-32 production.","definition_xrefs":["GOC:aruk","PMID:23729669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-32 production","termid":"GO:0072637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-32 production","secondary_identifiers":["GO:0150192"],"synonyms":[{"name":"regulation of interleukin-32 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-32 secretion","type":"narrow"}],"termid":"GO:0150189"}


id: PBO:0114351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane amino acid transmembrane transporter Dip5","termid":"PBO:0114351"}


id: PBO:0045813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 3","termid":"PBO:0045813"}


id: PBO:0014236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase involved in ubiquitin-mediated protein degradation Cdc48","termid":"PBO:0014236"}


id: GO:0003221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the right cardiac ventricle muscle are generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular cardiac muscle tissue morphogenesis","termid":"GO:0055010"},{"relation_name":"part_of","term_name":"cardiac right ventricle morphogenesis","termid":"GO:0003215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"right ventricular cardiac muscle tissue morphogenesis","synonyms":[{"name":"right ventricle myocardium morphogenesis","type":"exact"}],"termid":"GO:0003221"}


id: PBO:0061859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactomedin like 3","termid":"PBO:0061859"}


id: GO:0031606
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The proteasome core subcomplex that constitutes the two outer rings of the cytosolic proteasome core complex.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome core complex, alpha-subunit complex","termid":"GO:0019773"},{"relation_name":"part_of","term_name":"cytosolic proteasome core complex","termid":"GO:0031603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737","GO:0005829"],"is_obsolete":false,"name":"cytosolic proteasome core complex, alpha-subunit complex","termid":"GO:0031606"}


id: PBO:0040732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL6 corepressor like 1","termid":"PBO:0040732"}


id: FYPO:0007021
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional methylation of a cytosine residue in a tRNA molecule to form 2'-O-methylcytidine does not occur.","definition_xrefs":["PomBase:mah","PMID:25404562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA methylation","termid":"FYPO:0001766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished tRNA cytosine 2'-O-methylation","synonyms":[{"name":"2'-O-methylcytidine absent from tRNA","type":"related"},{"name":"abolished tRNA 2'-O-methylcytidine formation","type":"exact"},{"name":"abolished tRNA Cm formation","type":"exact"},{"name":"abolished tRNA cytosine 2'-O-methylation during mitotic cell cycle","type":"related"},{"name":"abolished tRNA cytosine 2'-O-methylation during vegetative growth","type":"exact"},{"name":"tRNA cytosine 2'-O-methylation abolished","type":"related"}],"termid":"FYPO:0007021"}


id: GO:0097230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the controlled self-propelled movement of a cell that results in translocation of the cell from one place to another as a result of a potassium ion stimulus.","definition_xrefs":["GOC:pf","PMID:21239624","PMID:19363786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"},{"relation_name":"part_of","term_name":"cellular response to potassium ion","termid":"GO:0035865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell motility in response to potassium ion","synonyms":[{"name":"K+ facilitation of cell motility","type":"exact"},{"name":"potassium ion facilitation of cell motility","type":"exact"}],"termid":"GO:0097230"}


id: GO:0015276
data:
  {"annotated_genes":["SJAG_02322","SJAG_03895"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95471,108862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005227"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion channel activity","termid":"GO:0005216"},{"relation_name":"is_a","term_name":"ligand-gated channel activity","termid":"GO:0022834"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02322":null,"SJAG_03895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ligand-gated monoatomic ion channel activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-622326","Reactome:R-HSA-451310","Reactome:R-HSA-629595","Reactome:R-HSA-622325","Reactome:R-HSA-451311"],"synonyms":[{"name":"ionotropic receptor activity","type":"narrow"},{"name":"ligand-gated ion channel activity","type":"broad"}],"termid":"GO:0015276","terms_by_termid":{"GO:0005227":null}}


id: MONDO:0017396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"toxic dermatosis","secondary_identifiers":["Orphanet:293815","MEDGEN:1842825","GARD:21171","UMLS:C5680999"],"termid":"MONDO:0017396","xrefs":{"Monarch":{"xref_id":"0017396"}}}


id: PR:P56289
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tif51 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P56289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26H5.10c","synonyms":[{"name":"Spom972h-tif51","type":"exact"},{"name":"eIF-5A-1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P56289"}


id: PBO:0092031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Arginine (ucg), mitochondrial","termid":"PBO:0092031"}


id: FYPO:0002736
data:
  {"alleles_by_uniquename":{"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"}],"single_locus_phenotype":[{"annotations":[119066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"},{"annotations":[118654,118655,118656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000618"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell does not proceed normally through a specific mitotic cell cycle phase. A mitotic cell cycle phase is any of the distinct periods or stages into which the mitotic cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events.","definition_xrefs":["GO:0022403","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle","termid":"FYPO:0000059"},{"relation_name":"is_a","term_name":"abnormal cell cycle phase","termid":"FYPO:0002735"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00871":null,"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null,"SJAG_04284":null,"SJAG_04464":null},"genotype_count":5,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_00871","SJAG_04464"],"name":"abnormal mitotic cell cycle phase","references_by_uniquename":{"PMID:23786411":null,"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_03575","SJAG_03351","SJAG_04284","SJAG_01956"],"single_locus_genotype_uniquenames":["nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nup61delta"],"termid":"FYPO:0002736","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000618":null,"FYPO:0000619":null,"FYPO_EXT:0000001":null}}


id: PBO:0029097
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cysteine_synthase_activity","termid":"PBO:0029097"}


id: MONDO:0001516
data:
  {"annotated_genes":["SJAG_00754","SJAG_00853","SJAG_03815","SJAG_00053","SJAG_04567","SJAG_02286","SJAG_03328","SJAG_01260","SJAG_03894","SJAG_05289","SJAG_03170","SJAG_02399","SJAG_02919","SJAG_04907","SJAG_02695","SJAG_01352","SJAG_01522","SJAG_03598","SJAG_04321","SJAG_04084","SJAG_01537","SJAG_03495"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86202,86203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008453"},{"annotations":[85337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008026"},{"annotations":[84745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011436"},{"annotations":[84631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011585"},{"annotations":[84665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010043"},{"annotations":[86505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010532"},{"annotations":[85509,85508,85507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008025"},{"annotations":[86117,86118,86119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012080"},{"annotations":[85801,85803,85802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013243"},{"annotations":[84808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015353"},{"annotations":[85657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013884"},{"annotations":[85186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030860"},{"annotations":[85682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011879"},{"annotations":[84711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0060585"},{"annotations":[85798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013853"},{"annotations":[86092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010190"},{"annotations":[86559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012890"},{"annotations":[86563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012891"},{"annotations":[86388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014485"},{"annotations":[85580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014874"},{"annotations":[85675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009669"},{"annotations":[85931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009673"},{"annotations":[85537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009672"},{"annotations":[85697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010056"},{"annotations":[85764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010338"}]},"cv_name":"mondo","definition":"A motor neuron disease that affect the muscles, and characterized by muscle weakness and atrophy resulting from progressive degeneration and irreversible loss of the anterior horn cells in the spinal cord (i.e., lower motor neurons) and the brain stem nuclei. The severity of the condition; the associated signs and symptoms; and the age at which symptoms develop varies by subtype. In general, people with spinal muscular atrophy (SMA) experience progressive weakness and atrophy of muscles involved in mobility, the ability to sit unassisted, and head control. Breathing and swallowing may also be affected in severe cases. SMA is generally caused by changes (mutations) in the SMN1 gene and is inherited in an autosomal recessive manner. Extra copies of the SMN2 gene modify the severity of SMA. Rare autosomal dominant (caused by mutations in DYNC1H1, BICD2, or VAPB genes) and X-linked (caused by mutations in UBA1) forms of SMA exist. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:7674","PMID:20301526"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"is_a","term_name":"anterior horn disorder","termid":"MONDO:0003182"},{"relation_name":"is_a","term_name":"hereditary motor neuron disease","termid":"MONDO:0024257"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00754":null,"SJAG_00853":null,"SJAG_01260":null,"SJAG_01352":null,"SJAG_01522":null,"SJAG_01537":null,"SJAG_02286":null,"SJAG_02399":null,"SJAG_02695":null,"SJAG_02919":null,"SJAG_03170":null,"SJAG_03328":null,"SJAG_03495":null,"SJAG_03598":null,"SJAG_03815":null,"SJAG_03894":null,"SJAG_04084":null,"SJAG_04321":null,"SJAG_04567":null,"SJAG_04907":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spinal muscular atrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2200853","MEDGEN:7755","UMLS:C0026847","icd11.foundation:71074342","EFO:0008525","ICD9:335.1","NANDO:1200003","ICD9:335.10","DOID:12377","ICD9:335.19","MESH:D009134","NANDO:2100231","NCIT:C85075","SCTID:5262007"],"termid":"MONDO:0001516","terms_by_termid":{"MONDO:0008025":null,"MONDO:0008026":null,"MONDO:0008453":null,"MONDO:0009669":null,"MONDO:0009672":null,"MONDO:0009673":null,"MONDO:0010043":null,"MONDO:0010056":null,"MONDO:0010190":null,"MONDO:0010338":null,"MONDO:0010532":null,"MONDO:0011436":null,"MONDO:0011585":null,"MONDO:0011879":null,"MONDO:0012080":null,"MONDO:0012890":null,"MONDO:0012891":null,"MONDO:0013243":null,"MONDO:0013853":null,"MONDO:0013884":null,"MONDO:0014485":null,"MONDO:0014874":null,"MONDO:0015353":null,"MONDO:0030860":null,"MONDO:0060585":null},"xrefs":{"Monarch":{"xref_id":"0001516"}}}


id: PBO:0048134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frataxin pseudogene 2","termid":"PBO:0048134"}


id: PBO:0090783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, serine Fsf1","termid":"PBO:0090783"}


id: PBO:0108896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 9","termid":"PBO:0108896"}


id: GO:0048396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of intermediate mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mesodermal cell fate determination","termid":"GO:0048335"},{"relation_name":"is_a","term_name":"regulation of intermediate mesodermal cell fate determination","termid":"GO:0048395"},{"relation_name":"negatively_regulates","term_name":"intermediate mesodermal cell fate determination","termid":"GO:0048394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of intermediate mesodermal cell fate determination","synonyms":[{"name":"down regulation of intermediate mesodermal cell fate determination","type":"exact"},{"name":"down-regulation of intermediate mesodermal cell fate determination","type":"exact"},{"name":"downregulation of intermediate mesodermal cell fate determination","type":"exact"},{"name":"inhibition of intermediate mesodermal cell fate determination","type":"narrow"}],"termid":"GO:0048396"}


id: FYPO:0001734
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which duplicated mitotic spindle pole bodies do not separate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body separation","termid":"FYPO:0001733"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0000054","FYPO:0000641","FYPO:0001320","FYPO:0000337","FYPO:0001985"],"is_obsolete":false,"name":"abolished mitotic spindle pole body separation","synonyms":[{"name":"abolished spindle pole body separation during mitotic cell cycle","type":"related"},{"name":"clustered mitotic spindle pole bodies","type":"related"},{"name":"mitotic SPB separation abolished","type":"exact"},{"name":"mitotic spindle pole body separation abolished","type":"exact"},{"name":"spindle pole body separation abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0001734"}


id: GO:0031017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the exocrine pancreas over time, from its formation to the mature structure. The exocrine pancreas produces and store zymogens of digestive enzymes, such as chymotrypsinogen and trypsinogen in the acinar cells.","definition_xrefs":["GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"pancreas development","termid":"GO:0031016"},{"relation_name":"part_of","term_name":"exocrine system development","termid":"GO:0035272"},{"relation_name":"part_of","term_name":"digestive system development","termid":"GO:0055123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exocrine pancreas development","termid":"GO:0031017"}


id: PBO:0110476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERRY endosomal RAB5 effector complex subunit 3","termid":"PBO:0110476"}


id: PBO:0084808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; identified based on homology to the filamentous fungus, <i>Ashbya gossypii</i>; SWAT-GFP and seamless-GFP fusion proteins localize to the mitochondria","termid":"PBO:0084808"}


id: MONDO:0023007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic disorder, characterized by under-development of bone marrow and neurological disorders such as weakness on one side of the body, agenesis of corpus callosum and hydrocephalus.","definition_xrefs":["PMID:2264478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"bone marrow disorder","termid":"MONDO:0003225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"Drachtman Weinblatt Sitarz syndrome","secondary_identifiers":["MEDGEN:419292","GARD:1913","UMLS:C2930947","MESH:C535603"],"synonyms":[{"name":"Drachtman Weinblatt Sitarz syndrome","type":"exact"},{"name":"marrow hypoplasia associated with congenital neurologic anomalies","type":"related"}],"termid":"MONDO:0023007","xrefs":{"Monarch":{"xref_id":"0023007"}}}


id: MONDO:0018009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-hypoproteinemic hypertrophic gastropathy is a rare gastroesophageal disease characterized by diffusely enlarged gastric folds, excessive mucus secretion, normal serum protein and gastric TGF-alpha levels. Patients typically present anemia, abdominal pain not related to eating or bowel habits and absence of peripheral edema.","definition_xrefs":["Orphanet:329883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomach disorder","termid":"MONDO:0004298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"non-hypoproteinemic hypertrophic gastropathy","secondary_identifiers":["UMLS:C4750834","MEDGEN:1654450","GARD:21495"],"synonyms":[{"name":"hypertrophic gastropathy without hypoproteinemia","type":"exact"}],"termid":"MONDO:0018009","xrefs":{"Monarch":{"xref_id":"0018009"}}}


id: GO:0071558
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a tri- or a dimethyl-lysine residue at position 27 of the histone H3 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:20622853","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"histone H3 demethylase activity","termid":"GO:0141052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0032452","GO:0140096","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"histone H3K27me2/H3K27me3 demethylase activity","secondary_identifiers":["Reactome:R-HSA-5617887","Reactome:R-HSA-9822985","Reactome:R-HSA-3222593","RHEA:60224","EC:1.14.11.68","Reactome:R-HSA-9822914","Reactome:R-HSA-5617431"],"synonyms":[{"name":"histone H3-tri/di-methyl-lysine-27 demethylase activity","type":"exact"},{"name":"histone H3K27me2 demethylase activity","type":"related"},{"name":"histone H3K27me3 demethylase activity","type":"related"},{"name":"histone demethylase activity (H3-K27 specific)","type":"broad"}],"termid":"GO:0071558"}


id: SO:0002206
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Identifies the biological source of the specified span of the sequence","definition_xrefs":["NCBI:tm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_attribute","termid":"SO:0000400"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_source","synonyms":[{"name":"INSDC_feature:source","type":"exact"},{"name":"sequence source","type":"exact"}],"termid":"SO:0002206"}


id: PBO:0113122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential ATP-binding protein required for DNA replication; component of the pre-replicative complex (pre-RC) which requires ORC to associate with chromatin and is in turn required for Mcm2-7p DNA association; dual role as a mitotic cyclin-dependent kinase inhibitor, that binds to and inhibits Cdc28p/Clb2p along with Sic1p, contributing to mitotic exit; homologous to S. pombe Cdc18p; relocalizes from nucleus to cytoplasm upon DNA replication stress; degraded in response to plasma membrane stress","termid":"PBO:0113122"}


id: PBO:0091224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane/prospore membrane sodium ion/proton antiporter Nhe1/Sod2","termid":"PBO:0091224"}


id: GO:0017086
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that catalyzes the reaction 3-methyl-2-oxobutanoate + lipoamide = S-(2-methylpropanoyl)-dihydrolipoamide + carbon dioxide (CO2). This requires thiamine diphosphate; the enzyme also acts on (S)-3-methyl-2-oxopentanoate and 4-methyl-2-oxo-pentanoate.","definition_xrefs":["PMID:15612914"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) complex (obsolete GO:0017086)","synonyms":[{"name":"BCADH","type":"exact"},{"name":"branched-chain alpha-ketoacid dehydrogenase complex","type":"exact"}],"termid":"GO:0017086"}


id: PBO:0052878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 8-3, pseudogene","termid":"PBO:0052878"}


id: GO:0071799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin D stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to prostaglandin stimulus","termid":"GO:0071379"},{"relation_name":"is_a","term_name":"response to prostaglandin D","termid":"GO:0071798"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to prostaglandin D stimulus","termid":"GO:0071799"}


id: GO:0060474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the controlled movement of a flagellated sperm cell is initiated as part of the process required for flagellated sperm to reach fertilization competence.","definition_xrefs":["GOC:krc","GOC:cilia","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"is_a","term_name":"positive regulation of flagellated sperm motility","termid":"GO:1902093"},{"relation_name":"part_of","term_name":"sperm capacitation","termid":"GO:0048240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of flagellated sperm motility involved in capacitation","synonyms":[{"name":"positive regulation of sperm motility involved in capacitation","type":"related"}],"termid":"GO:0060474"}


id: PBO:0071899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 37","termid":"PBO:0071899"}


id: PBO:0012289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human LAMTOR2 ortholog","termid":"PBO:0012289"}


id: PBO:0050308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 10","termid":"PBO:0050308"}


id: PBO:0113344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for 20S pre-rRNA processing; involved in processing of the 20S pre-rRNA at site D to generate mature 18S rRNA; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus; relative distribution to the nucleus increases upon DNA replication stress; also detected in peroxisomes","termid":"PBO:0113344"}


id: MONDO:0006791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe, intractable vomiting during pregnancy (usually the first trimester) accompanied by dehydration, weight loss, and electrolyte imbalances.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperemesis gravidarum","secondary_identifiers":["HP:0012188","MedDRA:10020614","MESH:D006939","MEDGEN:43776","EFO:1000971","SCTID:14094001","UMLS:C0020450"],"synonyms":[{"name":"hyperemesis gravidarum","type":"exact"},{"name":"hyperemesis gravidarum (disease)","type":"exact"},{"name":"pernicious vomiting of pregnancy","type":"related"},{"name":"pregnancy pernicious vomiting","type":"related"}],"termid":"MONDO:0006791","xrefs":{"Monarch":{"xref_id":"0006791"}}}


id: PBO:0068289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNASEK-C17orf49 readthrough","termid":"PBO:0068289"}


id: PBO:0012858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp42","termid":"PBO:0012858"}


id: PBO:0064729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 65","termid":"PBO:0064729"}


id: MONDO:0035401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anencephaly","termid":"MONDO:0000819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"isolated anencephaly","secondary_identifiers":["GARD:22254","ICD10CM:Q00.0","icd11.foundation:452325024","Orphanet:563609"],"termid":"MONDO:0035401","xrefs":{"Monarch":{"xref_id":"0035401"}}}


id: PBO:0059476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesothelin like","termid":"PBO:0059476"}


id: MONDO:0026722
data:
  {"annotated_genes":["SJAG_03698","SJAG_03418"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85398,85399],"is_not":false,"summary":null,"term":"MONDO:0026722"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03418":null,"SJAG_03698":null},"genotype_count":0,"is_obsolete":false,"name":"Mullegama-Klein-Martinez syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1683985","DOID:0111845","OMIM:301022","UMLS:C5193008"],"synonyms":[{"name":"MKMS","type":"related"},{"name":"MULLEGAMA-KLEIN-MARTINEZ SYNDROME","type":"related"},{"name":"Neurodevelopmental Disorder, X-Linked, With Craniofacial Abnormalities","type":"related"}],"termid":"MONDO:0026722","terms_by_termid":{"MONDO:0026722":null},"xrefs":{"Monarch":{"xref_id":"0026722"}}}


id: PATO:0000690
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's being marked by breaks or interruptions.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discontinuous","secondary_identifiers":["PATO:0000426"],"synonyms":[{"name":"intermittent","type":"related"},{"name":"interrupted","type":"exact"}],"termid":"PATO:0000690"}


id: SO:0000354
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of intronic nucleotide sequence targeted by a nuclease enzyme.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease_sensitive_site","termid":"SO:0000684"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"group_1_intron_homing_endonuclease_target_region","synonyms":[{"name":"group 1 intron homing endonuclease target region","type":"exact"}],"termid":"SO:0000354"}


id: MONDO:0008828
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Camptodactyly-arthropathy-coxa-vara-pericarditis (CACP) syndrome is a rare, genetic, rheumatologic disease characterized by congenital or early-onset camptodactyly and symmetrical, polyarticular, non-inflammatory, large joint arthropathy with synovial hyperplasia, as well as progressive coxa vara deformity and, occasionally, non-inflammatory pericarditis.","definition_xrefs":["Orphanet:2848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"camptodactyly-arthropathy-coxa vara-pericarditis syndrome","secondary_identifiers":["UMLS:C1859690","GARD:306","MESH:C537560","OMIM:208250","EFO:0009028","DOID:0090127","MEDGEN:349226"],"synonyms":[{"name":"CACP","type":"exact"},{"name":"CACP syndrome","type":"exact"},{"name":"Jacobs syndrome","type":"exact"},{"name":"PAC syndrome","type":"exact"},{"name":"arthropathy camptodactyly syndrome","type":"related"},{"name":"arthropathy-camptodactyly syndrome","type":"exact"},{"name":"camptodactyly arthropathy coxa vara pericarditis syndrome","type":"related"},{"name":"camptodactyly arthropathy pericarditis syndrome","type":"related"},{"name":"camptodactyly-arthropathy-coxa vara-pericarditis syndrome","type":"exact"},{"name":"camptodactyly-arthropathy-coxa-vara-pericarditis syndrome","type":"related"},{"name":"camptodactyly-arthropathy-pericarditis syndrome","type":"exact"},{"name":"congenital familial hypertrophic synovitis","type":"exact"},{"name":"familial fibrosing serositis","type":"exact"},{"name":"fibrosing serositis, familial","type":"related"},{"name":"hypertrophic synovitis, congenital familial","type":"related"},{"name":"pericarditis arthropathy camptodactyly syndrome","type":"related"},{"name":"pericarditis-arthropathy-camptodactyly syndrome","type":"exact"}],"termid":"MONDO:0008828","xrefs":{"Monarch":{"xref_id":"0008828"}}}


id: PBO:0077495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 214","termid":"PBO:0077495"}


id: MONDO:0009687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital myasthenic syndrome","termid":"MONDO:0018940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"myasthenia, congenital, refractory to acetylcholinesterase inhibitors","secondary_identifiers":["MESH:C564979","MEDGEN:338127","UMLS:C1850806","OMIM:254190"],"synonyms":[{"name":"myasthenia, congenital, refractory to acetylcholinesterase inhibitors","type":"exact"}],"termid":"MONDO:0009687","xrefs":{"Monarch":{"xref_id":"0009687"}}}


id: PBO:0003175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoserine O-acetyltransferase (predicted)","termid":"PBO:0003175"}


id: PBO:0027040
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_binding_at_mitotically_up-regulated_genes","termid":"PBO:0027040"}


id: GO:0001755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo.","definition_xrefs":["GOC:ascb_2009","GOC:dph","ISBN:0878932437","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell migration","termid":"GO:0090497"},{"relation_name":"part_of","term_name":"neural crest cell development","termid":"GO:0014032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest cell migration","termid":"GO:0001755"}


id: PBO:0087861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator of genes involved in glycolysis; DNA-binding protein that interacts and functions with the transcriptional activator Gcr2p; contains a long intron, which allows multiple RNA and protein isoforms with varying expression levels depending on glucose availability","termid":"PBO:0087861"}


id: PBO:0045008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIO2 antisense RNA 1","termid":"PBO:0045008"}


id: SO:0000239
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequences extending on either side of a specific region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"topologically_defined_region","termid":"SO:0001412"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flanking_region","synonyms":[{"name":"flanking region","type":"exact"}],"termid":"SO:0000239"}


id: PR:Q10412
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsc58 gene.","definition_xrefs":["UniProtKB:Q10412","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin structure-remodeling complex subunit rsc58 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.07c","synonyms":[{"name":"RSC complex subunit rsc58 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rsc58","type":"exact"}],"termid":"PR:Q10412"}


id: PBO:0070029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1326, pseudogene","termid":"PBO:0070029"}


id: MONDO:0041052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"post-infectious neuralgia","termid":"MONDO:0021677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"postherpetic neuralgia","secondary_identifiers":["UMLS:C0032768","icd11.foundation:1797210650","Orphanet:466673","SCTID:2177002","MEDGEN:18589"],"synonyms":[{"name":"PHN - post-herpetic neuralgia","type":"related"},{"name":"post-zoster neuralgia","type":"related"},{"name":"postherpetic neuralgia","type":"exact"}],"termid":"MONDO:0041052","xrefs":{"Monarch":{"xref_id":"0041052"}}}


id: SO:0001371
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_carboxymethylaminomethyl_2_thiouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_carboxymethylaminomethyl_two_thiouridine","secondary_identifiers":["RNAMOD:079"],"synonyms":[{"name":"5-carboxymethylaminomethyl-2-thiouridine","type":"exact"},{"name":"cmnm5s2U","type":"exact"},{"name":"five carboxymethylaminomethyl two thiouridine","type":"exact"}],"termid":"SO:0001371"}


id: GO:0009964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of flavonoids.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"regulation of flavonoid biosynthetic process","termid":"GO:0009962"},{"relation_name":"negatively_regulates","term_name":"flavonoid biosynthetic process","termid":"GO:0009813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of flavonoid biosynthetic process","synonyms":[{"name":"down regulation of flavonoid biosynthetic process","type":"exact"},{"name":"down-regulation of flavonoid biosynthetic process","type":"exact"},{"name":"downregulation of flavonoid biosynthetic process","type":"exact"},{"name":"inhibition of flavonoid biosynthetic process","type":"narrow"},{"name":"negative regulation of flavonoid anabolism","type":"exact"},{"name":"negative regulation of flavonoid biosynthesis","type":"exact"},{"name":"negative regulation of flavonoid formation","type":"exact"},{"name":"negative regulation of flavonoid synthesis","type":"exact"}],"termid":"GO:0009964"}


id: PBO:0076460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TALAM1 transcript, MALAT1 antisense RNA","termid":"PBO:0076460"}


id: PBO:0060056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 3","termid":"PBO:0060056"}


id: MONDO:0022208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arthropathy","termid":"MONDO:0006816"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystal arthropathy","secondary_identifiers":["ICD9:712.88","ICD9:712.90","SCTID:18834007","MEDGEN:508879","UMLS:C0152087","ICD9:712.80","ICD9:712","ICD9:712.98"],"synonyms":[{"name":"Arthritides, Crystal","type":"related"},{"name":"Arthritides, Crystalline","type":"related"},{"name":"Arthritis, Crystal","type":"related"},{"name":"Arthritis, Crystalline","type":"related"},{"name":"Arthropathies, Crystal","type":"related"},{"name":"Arthropathies, Crystalline","type":"related"},{"name":"Arthropathy, Crystal","type":"related"},{"name":"Arthropathy, Crystalline","type":"related"},{"name":"Crystal Arthritides","type":"related"},{"name":"Crystal Arthritis","type":"related"},{"name":"Crystal Arthropathies","type":"related"},{"name":"Crystal Arthropathy","type":"related"},{"name":"Crystal arthropathy","type":"related"},{"name":"Crystal-induced arthritis AND/OR synovitis","type":"related"},{"name":"Crystal-related arthropathy and periarthropathy","type":"related"},{"name":"Crystalline Arthritides","type":"related"},{"name":"Crystalline Arthritis","type":"related"},{"name":"Crystalline Arthropathies","type":"related"},{"name":"Crystalline Arthropathy","type":"related"},{"name":"Crystalline arthritis","type":"related"},{"name":"crystal arthropathy","type":"exact"},{"name":"crystal-induced arthritis and/or synovitis","type":"related"},{"name":"crystal-related arthropathy and periarthropathy","type":"related"},{"name":"crystalline arthritis","type":"related"}],"termid":"MONDO:0022208","xrefs":{"Monarch":{"xref_id":"0022208"}}}


id: GO:0048750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the compound eye corneal lens are generated and organized.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"compound eye morphogenesis","termid":"GO:0001745"},{"relation_name":"part_of","term_name":"compound eye corneal lens development","termid":"GO:0048058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye corneal lens morphogenesis","termid":"GO:0048750"}


id: PBO:0040678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAR3 adaptor protein, NSP family member","termid":"PBO:0040678"}


id: PBO:0086933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab family GTPase; involved in the ER-to-Golgi step of the secretory pathway; complex formation with the Rab escort protein Mrs6p is required for prenylation of Ypt1p by type II protein geranylgeranyltransferase (Bet2p-Bet4p); binds to unspliced HAC1 mRNA; regulates the unfolded protein response (UPR) by promoting the decay of HAC1 RNA; localizes to the early Golgi, the transitional Golgi and ER membranes, pre-autophagosomal structures, and cytoplasmic vesicles","termid":"PBO:0086933"}


id: PBO:0079916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase hinge protein pseudogene 1","termid":"PBO:0079916"}


id: MONDO:1012778
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any epidermolysis bullosa simplex that occurs in dogs due to a mutation in the PLEC gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex, dog","termid":"MONDO:1011500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermolysis bullosa simplex, PLEC-related, dog","secondary_identifiers":["OMIA:002080-9615"],"termid":"MONDO:1012778","xrefs":{"Monarch":{"xref_id":"1012778"}}}


id: PBO:0043978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSAG family member 4 (pseudogene)","termid":"PBO:0043978"}


id: PATO:0001463
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a cell's plasma membrane by virtue of a brief fluctuation in the bearer's potential caused by the rapid opening and closing of voltage-gated ion channels.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Action_potential"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electric potential","termid":"PATO:0001464"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"action potential","termid":"PATO:0001463"}


id: GO:0031937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of chromatin silencing.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of chromatin silencing (obsolete GO:0031937)","synonyms":[{"name":"activation of chromatin silencing","type":"narrow"},{"name":"positive regulation of heterochromatic silencing","type":"exact"},{"name":"stimulation of chromatin silencing","type":"narrow"},{"name":"up regulation of chromatin silencing","type":"exact"},{"name":"up-regulation of chromatin silencing","type":"exact"},{"name":"upregulation of chromatin silencing","type":"exact"}],"termid":"GO:0031937"}


id: PBO:0081509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 415 pseudogene 1","termid":"PBO:0081509"}


id: PBO:0005379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase protein x component, Pdx1 (predicted)","termid":"PBO:0005379"}


id: GO:0048371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a lateral mesoderm cell.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell differentiation","termid":"GO:0048333"},{"relation_name":"part_of","term_name":"lateral mesoderm formation","termid":"GO:0048370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral mesodermal cell differentiation","synonyms":[{"name":"lateral mesoderm cell differentiation","type":"exact"},{"name":"lateral plate mesoderm cell differentiation","type":"exact"},{"name":"lateral plate mesodermal cell differentiation","type":"exact"}],"termid":"GO:0048371"}


id: PR:Q10271
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arb2 gene.","definition_xrefs":["UniProtKB:Q10271","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argonaute-binding protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.07","synonyms":[{"name":"Spom972h-arb2","type":"exact"}],"termid":"PR:Q10271"}


id: GO:1903772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of viral budding via host ESCRT complex.","definition_xrefs":["GO_REF:0000058","PMID:24878737","GOC:als","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral process","termid":"GO:0050792"},{"relation_name":"regulates","term_name":"viral budding via host ESCRT complex","termid":"GO:0039702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of viral budding via host ESCRT complex","synonyms":[{"name":"regulation of host-assisted viral budding","type":"broad"},{"name":"regulation of viral budding through the ESCRT machinery","type":"related"}],"termid":"GO:1903772"}


id: PBO:0068896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 138, pseudogene","termid":"PBO:0068896"}


id: MONDO:0010522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An amelogenesis imperfecta associated with mutation in a gene in the Xq22-q28 region.","definition_xrefs":["DOID:0110059","PMID:1358807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta","termid":"MONDO:0019507"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked amelogenesis imperfecta hypoplastic/hypomaturation 2","secondary_identifiers":["GARD:9944","OMIM:301201","MEDGEN:336845","UMLS:C1845051"],"synonyms":[{"name":"AIH3","type":"exact"},{"name":"AIH3 (formerly)","type":"related"},{"name":"X-linked amelogenesis imperfecta hypoplastic/hypomaturation type 2","type":"exact"},{"name":"X-linked enamel hypoplasia","type":"related"},{"name":"amelogenesis imperfecta 3 hypoplastic type","type":"exact"},{"name":"amelogenesis imperfecta 3, hypoplastic type","type":"related"},{"name":"amelogenesis imperfecta 3, hypoplastic type (formerly)","type":"related"},{"name":"amelogenesis imperfecta 3, hypoplastic type, formerly","type":"related"},{"name":"amelogenesis imperfecta type IE X-linked 2","type":"exact"},{"name":"amelogenesis imperfecta, hypoplastic/hypomaturation, X-linked 2","type":"related"},{"name":"amelogenesis imperfecta, hypoplastic/hypomaturation, X-linked type 2","type":"exact"},{"name":"amelogenesis imperfecta, type IE, X-linked 2","type":"exact"},{"name":"enamel hypoplasia, X-linked","type":"related"}],"termid":"MONDO:0010522","xrefs":{"Monarch":{"xref_id":"0010522"}}}


id: RO:0002107
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation between a motor neuron and a muscle that it synapses to via a type II bouton.","direct_ancestors":[{"relation_name":"is_a","term_name":"synapsed_to","termid":"RO:0002120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapsed_via_type_II_bouton_to","termid":"RO:0002107"}


id: GO:0003803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selective cleavage of the Arg-Ile bond in factor X to form factor Xa.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete coagulation factor IXa activity (obsolete GO:0003803)","synonyms":[{"name":"Christmas factor activity","type":"related"},{"name":"activated blood coagulation factor XI","type":"related"},{"name":"activated blood-coagulation factor IX","type":"related"},{"name":"activated christmas factor","type":"related"},{"name":"autoprothrombin II","type":"related"},{"name":"blood coagulation factor IX activity","type":"exact"},{"name":"blood platelet cofactor II","type":"related"},{"name":"blood-coagulation factor IXa","type":"related"},{"name":"coagulation factor IXa activity","type":"exact"}],"termid":"GO:0003803"}


id: GO:0047035
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: testosterone + NAD+ = androst-4-ene-3,17-dione + NADH.","definition_xrefs":["RHEA:14929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testosterone dehydrogenase [NAD(P)+] activity","termid":"GO:0030283"},{"relation_name":"is_a","term_name":"17-beta-hydroxysteroid dehydrogenase (NAD+) activity","termid":"GO:0044594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"testosterone dehydrogenase (NAD+) activity","secondary_identifiers":["GO:0050327","Wikipedia:3alpha(17beta)-hydroxysteroid_dehydrogenase_(NAD+)","EC:1.1.1.239","MetaCyc:TESTOSTERONE-17-BETA-DEHYDROGENASE-RXN","KEGG_REACTION:R01836"],"synonyms":[{"name":"17-beta-HSD activity","type":"broad"},{"name":"17-ketoreductase activity","type":"broad"},{"name":"17beta-HSD","type":"related"},{"name":"17beta-hydroxysteroid:NAD+ 17-oxidoreductase activity","type":"related"},{"name":"3-alpha(17-beta)-hydroxysteroid dehydrogenase (NAD+) activity","type":"broad"},{"name":"3alpha(17beta)-HSD","type":"related"},{"name":"3alpha(17beta)-hydroxysteroid dehydrogenase (NAD+)","type":"broad"},{"name":"3alpha(or 17beta)-hydroxysteroid:NAD+ oxidoreductase activity","type":"broad"},{"name":"3alpha,17beta-hydroxy steroid dehydrogenase activity","type":"broad"},{"name":"testosterone 17-beta-dehydrogenase (NAD+) activity","type":"exact"},{"name":"testosterone 17b-dehydrogenase activity","type":"exact"},{"name":"testosterone 17beta-dehydrogenase activity","type":"related"}],"termid":"GO:0047035"}


id: GO:0051000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of the enzyme nitric-oxide synthase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of monooxygenase activity","termid":"GO:0032770"},{"relation_name":"is_a","term_name":"regulation of nitric-oxide synthase activity","termid":"GO:0050999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nitric-oxide synthase activity","synonyms":[{"name":"NOS activator","type":"exact"},{"name":"activation of nitric-oxide synthase activity","type":"narrow"},{"name":"nitric-oxide synthase activator","type":"exact"},{"name":"positive regulation of NOS activity","type":"exact"},{"name":"stimulation of nitric-oxide synthase activity","type":"narrow"},{"name":"up regulation of nitric-oxide synthase activity","type":"exact"},{"name":"up-regulation of nitric-oxide synthase activity","type":"exact"},{"name":"upregulation of nitric-oxide synthase activity","type":"exact"}],"termid":"GO:0051000"}


id: SO:0001315
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_acetyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_acetyladenosine","secondary_identifiers":["RNAMOD:102"],"synonyms":[{"name":"N6 acetyladenosine","type":"exact"},{"name":"N6-acetyladenosine","type":"exact"},{"name":"ac6A","type":"exact"}],"termid":"SO:0001315"}


id: PBO:0055369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2798","termid":"PBO:0055369"}


id: MONDO:0015846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A uterovaginal malformation that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"gene_count":0,"genotype_count":0,"name":"obsolete syndromic uterovaginal malformation (obsolete MONDO:0015846)","secondary_identifiers":["Orphanet:180148"],"synonyms":[{"name":"syndrome associated with uterovaginal malformation","type":"exact"},{"name":"syndromic uterovaginal malformation","type":"exact"}],"termid":"MONDO:0015846","xrefs":{"Monarch":{"xref_id":"0015846"}}}


id: PBO:0005817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPT oligopeptide transporter family protein (predicted)","termid":"PBO:0005817"}


id: GO:1901294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Negative regulation of DNA binding that results in negative regulation of a SREBP signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:22017871"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of SREBP signaling pathway by negative regulation of DNA binding (obsolete GO:1901294)","synonyms":[{"name":"inhibition of SREBP-dependent transcription by blocking DNA binding","type":"exact"},{"name":"negative regulation of SREBP signaling pathway by down regulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP signaling pathway by down-regulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP signaling pathway by downregulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP signaling pathway by inhibition of DNA binding","type":"narrow"},{"name":"negative regulation of SREBP-mediated signaling pathway by down regulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP-mediated signaling pathway by down-regulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP-mediated signaling pathway by downregulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP-mediated signaling pathway by inhibition of DNA binding","type":"narrow"},{"name":"negative regulation of SREBP-mediated signaling pathway by negative regulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP-mediated signalling pathway by down regulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP-mediated signalling pathway by down-regulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP-mediated signalling pathway by downregulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP-mediated signalling pathway by inhibition of DNA binding","type":"narrow"},{"name":"negative regulation of SREBP-mediated signalling pathway by negative regulation of DNA binding","type":"exact"}],"termid":"GO:1901294"}


id: SO:0000526
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in germline configuration including more than one V-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_gene_cluster","termid":"SO:0000482"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_cluster","synonyms":[{"name":"V cluster","type":"exact"},{"name":"V-CLUSTER","type":"exact"}],"termid":"SO:0000526"}


id: GO:0060727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate or frequency of coreceptor activity involved in epidermal growth factor receptor signaling pathway.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of coreceptor activity involved in epidermal growth factor receptor signaling pathway (obsolete GO:0060727)","synonyms":[{"name":"positive regulation of Neu/ErbB-2 receptor activity","type":"narrow"},{"name":"positive regulation of coreceptor activity involved in epidermal growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0060727"}


id: PBO:0041943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 4","termid":"PBO:0041943"}


id: PBO:0060014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 2","termid":"PBO:0060014"}


id: PBO:0047902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(7)(q36)","termid":"PBO:0047902"}


id: GO:0008774
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetaldehyde + CoA + NAD+ = acetyl-CoA + NADH + H+.","definition_xrefs":["EC:1.2.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"acetaldehyde dehydrogenase (acetylating) activity","secondary_identifiers":["MetaCyc:ACETALD-DEHYDROG-RXN","RHEA:23288"],"synonyms":[{"name":"ADA","type":"related"},{"name":"DmpF","type":"related"},{"name":"acetaldehyde:NAD+ oxidoreductase (CoA-acetylating)","type":"related"},{"name":"acylating acetaldehyde dehydrogenase activity","type":"related"},{"name":"aldehyde dehydrogenase (acylating) activity","type":"related"}],"termid":"GO:0008774"}


id: MONDO:0008738
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A complete lack of ganglia in the intestine. This is an extremely severe form of aganglionosis distinct from Hirschsprung Disease. This is an n-of-1 use case where only one patient or family has been described with this disorder.","definition_xrefs":["PMID:596929","NCIT:C101074"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Hirschsprung disease","termid":"MONDO:0018309"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aganglionosis, total intestinal","secondary_identifiers":["OMIM:202550","UMLS:C0345240","NANDO:2200948","MEDGEN:83378","MESH:C538058","NANDO:1200460"],"synonyms":[{"name":"aganglionosis, total intestinal","type":"exact"},{"name":"total intestinal aganglionosis","type":"exact"}],"termid":"MONDO:0008738","xrefs":{"Monarch":{"xref_id":"0008738"}}}


id: GO:0045289
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the generalized reaction: luciferin + O2 = oxidized luciferin + CO2 + light. There may be additional substrates and reactants involved in the reaction. The reaction results in light emission as luciferin returns to the ground state after enzymatic oxidation.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"luciferin monooxygenase activity","synonyms":[{"name":"luciferase activity","type":"exact"},{"name":"luciferase monooxygenase activity","type":"related"}],"termid":"GO:0045289"}


id: PBO:0001855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"octicosapeptide repeat","termid":"PBO:0001855"}


id: GO:0075260
data:
  {"annotated_genes":["SJAG_03501"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075319"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of spore-bearing organ development, a process in which hyphae grow into special aggregates called fruiting bodies that produce new spores.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03501":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of spore-bearing organ development","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0075260","terms_by_termid":{"GO:0075319":null}}


id: GO:0034808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: benzo(a)pyrene + O2 = benzo(a)pyrene-cis-4,5-dihydrodiol.","definition_xrefs":["UM-BBD_reactionID:r1126"],"gene_count":0,"genotype_count":0,"name":"obsolete benzo(a)pyrene 4,5-dioxygenase activity (obsolete GO:0034808)","termid":"GO:0034808"}


id: PBO:0089308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxamine 5'-phosphate oxidase Pdx3","termid":"PBO:0089308"}


id: MONDO:0033968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0006025"],"is_obsolete":false,"name":"immune dysregulation-inflammatory bowel disease-arthritis-recurrent infections-lymphopenia syndrome","secondary_identifiers":["GARD:22204","MEDGEN:1799956","UMLS:C5568533","Orphanet:529977"],"termid":"MONDO:0033968","xrefs":{"Monarch":{"xref_id":"0033968"}}}


id: PBO:0087647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Hap2p/3p/4p/5p CCAAT-binding complex; complex is heme-activated and glucose-repressed; complex is a transcriptional activator and global regulator of respiratory gene expression; contains sequences sufficient for both complex assembly and DNA binding; respiratory defect of the null mutant is functionally complemented by human NFYA","termid":"PBO:0087647"}


id: GO:0002659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of peripheral tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tolerance induction dependent upon immune response","termid":"GO:0002653"},{"relation_name":"is_a","term_name":"regulation of peripheral tolerance induction","termid":"GO:0002658"},{"relation_name":"negatively_regulates","term_name":"peripheral tolerance induction","termid":"GO:0002465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peripheral tolerance induction","synonyms":[{"name":"down regulation of peripheral tolerance induction","type":"exact"},{"name":"down-regulation of peripheral tolerance induction","type":"exact"},{"name":"downregulation of peripheral tolerance induction","type":"exact"},{"name":"inhibition of peripheral tolerance induction","type":"narrow"}],"termid":"GO:0002659"}


id: PBO:0071252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 93","termid":"PBO:0071252"}


id: PBO:0089721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation inhibitor","termid":"PBO:0089721"}


id: GO:1900077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to insulin stimulus.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to insulin stimulus","termid":"GO:1900076"},{"relation_name":"negatively_regulates","term_name":"cellular response to insulin stimulus","termid":"GO:0032869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to insulin stimulus","synonyms":[{"name":"down regulation of cellular response to insulin stimulus","type":"exact"},{"name":"down-regulation of cellular response to insulin stimulus","type":"exact"},{"name":"downregulation of cellular response to insulin stimulus","type":"exact"},{"name":"inhibition of cellular response to insulin stimulus","type":"narrow"}],"termid":"GO:1900077"}


id: FYPO:0004066
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at one or more protein-coding genes is increased.","definition_xrefs":["PMID:19328067","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to chromatin at protein coding gene","synonyms":[{"name":"increased protein localisation to chromatin at protein coding gene","type":"exact"},{"name":"increased protein localization to chromatin at protein coding gene during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at protein-coding gene during vegetative growth","type":"exact"}],"termid":"FYPO:0004066"}


id: MONDO:0000585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Good syndrome (obsolete MONDO:0000585)","termid":"MONDO:0000585","xrefs":{"Monarch":{"xref_id":"0000585"}}}


id: GO:0000703
data:
  {"annotated_genes":["SJAG_03724"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95638],"is_not":false,"summary":null,"term":"GO:0000703"},{"annotations":[95632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034042"},{"annotations":[95633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034043"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal oxidized pyrimidine bases by cleaving the N-C1' glycosidic bond between the oxidized pyrimidine and the deoxyribose sugar. The reaction involves formation of a covalent enzyme-pyrimidine base intermediate. Release of the enzyme and free base by a beta-elimination or a beta, gamma-elimination mechanism results in the cleavage of the DNA backbone 3' of the apyrimidinic (AP) site.","definition_xrefs":["GOC:elh","PMID:11554296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidized base lesion DNA N-glycosylase activity","termid":"GO:0000702"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0140097","GO:0016798","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-110224","GO:0019004","Reactome:R-HSA-110226","Reactome:R-HSA-110227"],"synonyms":[{"name":"DNA glycosylase/AP-lyase","type":"broad"},{"name":"DNA glycosylase/beta-lyase","type":"broad"},{"name":"bifunctional DNA glycosylase","type":"broad"},{"name":"endodeoxyribonuclease III","type":"related"},{"name":"endonuclease III","type":"related"},{"name":"endonuclease VIII activity","type":"related"},{"name":"oxidized pyrimidine base lesion DNA N-glycosylase activity","type":"exact"},{"name":"pyrimidine-specific oxidized base lesion DNA N-glycosylase activity","type":"related"}],"termid":"GO:0000703","terms_by_termid":{"GO:0000703":null,"GO:0034042":null,"GO:0034043":null}}


id: PBO:0065124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase D2","termid":"PBO:0065124"}


id: GO:0140517
data:
  {"annotated_genes":["SJAG_04601","SJAG_03629","SJAG_00943","SJAG_02622","SJAG_04959"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101412,103806,107583,117626,117627],"is_not":false,"summary":null,"term":"GO:0140517"},{"annotations":[117623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990247"},{"annotations":[96724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180014"}]},"cv_name":"molecular_function","definition":"The binding activity of a protein that brings together another protein and an RNA, permitting those molecules to function in a coordinated way.","definition_xrefs":["PMID:24470144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00943":null,"SJAG_02622":null,"SJAG_03629":null,"SJAG_04601":null,"SJAG_04959":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0030674","GO:0003674"],"is_obsolete":false,"name":"protein-RNA adaptor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140517","terms_by_termid":{"GO:0140517":null,"GO:0180014":null,"GO:1990247":null}}


id: SO:0001178
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding pyrrolysyl tRNA (SO:0000766).","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrrolysine_tRNA_primary_transcript","synonyms":[{"name":"pyrrolysine tRNA primary transcript","type":"exact"}],"termid":"SO:0001178"}


id: PBO:0029144
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_actomyosin_contractile_ring","termid":"PBO:0029144"}


id: FYPO:0007096
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the actin fusion focus is decreased.","definition_xrefs":["PMID:31495586","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to shmoo tip","termid":"FYPO:0004802"},{"relation_name":"is_a","term_name":"abnormal protein localization to actin fusion focus","termid":"FYPO:0006503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to actin fusion focus","synonyms":[{"name":"decreased protein localisation to actin fusion focus","type":"exact"},{"name":"reduced protein localization to actin fusion focus","type":"exact"}],"termid":"FYPO:0007096"}


id: GO:0009934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of meristem organization.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"meristem structural organization","termid":"GO:0009933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of meristem structural organization","synonyms":[{"name":"regulation of meristem organisation","type":"exact"},{"name":"regulation of meristem organization","type":"broad"}],"termid":"GO:0009934"}


id: GO:0015887
data:
  {"annotated_genes":["SJAG_05175"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098717"}]},"cv_name":"biological_process","definition":"The process in which pantothenate is transported across a membrane. Pantothenate is the anion of pantothenic acid, the amide of beta-alanine and pantoic acid; it is a B complex vitamin that is a constituent of coenzyme A and is distributed ubiquitously in foods.","definition_xrefs":["GOC:ai","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"vitamin transmembrane transport","termid":"GO:0035461"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"},{"relation_name":"is_a","term_name":"modified amino acid transport","termid":"GO:0072337"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05175":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"pantothenate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pantothenate membrane transport","type":"exact"},{"name":"pantothenate transport","type":"exact"},{"name":"vitamin B5 transport","type":"exact"}],"termid":"GO:0015887","terms_by_termid":{"GO:0098717":null}}


id: PBO:0087067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L33A; N-terminally acetylated; rpl33a null mutant exhibits slow growth while rpl33a rpl33b double null mutant is inviable; homologous to mammalian ribosomal protein L35A, no bacterial homolog; RPL33A has a paralog, RPL33B, that arose from the whole genome duplication","termid":"PBO:0087067"}


id: MONDO:0009750
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropathy, hereditary motor and sensory, with excessive myelin folding complex, autosomal recessive","secondary_identifiers":["MESH:C564947","UMLS:C1850385","MEDGEN:342491","OMIM:256855"],"synonyms":[{"name":"Charcot-Marie-Tooth disease with excessive myelin folding, autosomal recessive","type":"related"},{"name":"HMSN with excessive myelin Outfolding, autosomal recessive","type":"related"},{"name":"neuropathy, hereditary motor and sensory, with excessive myelin folding complex, autosomal recessive","type":"exact"}],"termid":"MONDO:0009750","xrefs":{"Monarch":{"xref_id":"0009750"}}}


id: PR:Q9P7V2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- abc4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7V2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-binding cassette transporter abc4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30.04c","synonyms":[{"name":"ABC transporter abc4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ATP-energized glutathione S-conjugate pump abc4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-abc4","type":"exact"},{"name":"glutathione S-conjugate-transporting ATPase abc4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7V2"}


id: MONDO:0000265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of lung inflammation resulting from the aspiration of food, liquid, or gastric contents into the upper respiratory tract.","definition_xrefs":["MESH:D011015"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pneumonia","termid":"MONDO:0005249"},{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspiration pneumonia","secondary_identifiers":["UMLS:C0032290","DOID:0050152","HP:0011951","MEDGEN:10814","SCTID:422588002"],"synonyms":[{"name":"Mendelson syndrome","type":"exact"},{"name":"Mendelson's syndrome","type":"exact"},{"name":"Mendelsons syndrome","type":"exact"},{"name":"Pneumonias, aspiration","type":"exact"},{"name":"acid aspiration syndrome","type":"exact"},{"name":"acid aspiration syndromes","type":"exact"},{"name":"aspiration Pneumonias","type":"exact"},{"name":"aspiration pneumonia","type":"exact"},{"name":"aspiration pneumonia (disease)","type":"exact"},{"name":"gastric acid aspiration syndrome","type":"exact"},{"name":"inhalation pneumonia","type":"related"},{"name":"syndrome, Mendelson","type":"exact"},{"name":"syndrome, Mendelson's","type":"exact"},{"name":"syndrome, acid aspiration","type":"exact"},{"name":"syndromes, acid aspiration","type":"exact"}],"termid":"MONDO:0000265","xrefs":{"Monarch":{"xref_id":"0000265"}}}


id: PBO:0046656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"esterase D","termid":"PBO:0046656"}


id: GO:0015787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of UDP-glucuronic acid into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. UDP-glucuronic acid is a substance composed of glucuronic acid in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transport","termid":"GO:0090481"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"UDP-glucuronate transmembrane transport","synonyms":[{"name":"UDP-glucuronic acid transmembrane transport","type":"exact"},{"name":"UDP-glucuronic acid transport","type":"related"}],"termid":"GO:0015787"}


id: PBO:0040938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 9","termid":"PBO:0040938"}


id: PBO:0080129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle associated membrane protein 8","termid":"PBO:0080129"}


id: MONDO:0054637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Noonan syndrome-like disorder with loose anagen hair","termid":"MONDO:0011899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Noonan syndrome-like disorder with loose anagen hair 1","secondary_identifiers":["UMLS:C4478716","NCIT:C176939","OMIM:607721","MEDGEN:1379805","DOID:0080692"],"synonyms":[{"name":"NSLH","type":"broad"},{"name":"NSLH1","type":"exact"},{"name":"Noonan syndrome-like disorder with loose anagen hair 1","type":"exact"},{"name":"Noonan syndrome-like with loose anagen hair 1","type":"exact"},{"name":"Tosti syndrome","type":"related"}],"termid":"MONDO:0054637","xrefs":{"Monarch":{"xref_id":"0054637"}}}


id: PBO:0057584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 889","termid":"PBO:0057584"}


id: PBO:0028903
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_cellular_response_to_DNA_damage","termid":"PBO:0028903"}


id: PBO:0046491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS repressor factor like","termid":"PBO:0046491"}


id: PBO:0089636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Rrp14","termid":"PBO:0089636"}


id: MONDO:0035173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, intellectual disability malformation syndrome characterized by global developmental delay, intellectual disability, delayed speech and language development, epilepsy, autistic behavior, and moderate facial dysmorphism (including elongated face, narrow forehead, arched eyebrows, horizontal palpebral fissures, hypertelorism, epicanthus, midface flattening, short nose, long and featureless philtrum, thin upper lip, macrostomia, and prominent chin). Additional variable manifestations include microcephaly, hypotonia, hypertrichosis, and strabismus.","definition_xrefs":["Orphanet:531151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 9","termid":"MONDO:0016874"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"9q21.13 microdeletion syndrome","secondary_identifiers":["GARD:22212","ICD10CM:F78.1","MEDGEN:1803709","UMLS:C5681312"],"termid":"MONDO:0035173","xrefs":{"Monarch":{"xref_id":"0035173"}}}


id: GO:0038121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the C-C motif chemokine 21 (CCL21) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","PMID:15059845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-C chemokine receptor activity","termid":"GO:0016493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"C-C motif chemokine 21 receptor activity","synonyms":[{"name":"CCL21 receptor activity","type":"related"}],"termid":"GO:0038121"}


id: PBO:0005735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrin methyltransferase (predicted)","termid":"PBO:0005735"}


id: GO:0000180
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic large ribosomal subunit (obsolete GO:0000180)","synonyms":[{"name":"cytosolic large ribosomal subunit","type":"exact"}],"termid":"GO:0000180"}


id: PATO:0001212
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001212 length_unit (obsolete PATO:0001212)","termid":"PATO:0001212"}


id: PR:O14134
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- elf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA export factor elf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.08c","synonyms":[{"name":"Spom972h-elf1","type":"exact"}],"termid":"PR:O14134"}


id: GO:0010685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetracyclic triterpenoid compounds, terpenoids with six isoprene units and 4 carbon rings.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triterpenoid metabolic process","termid":"GO:0006722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"tetracyclic triterpenoid metabolic process","synonyms":[{"name":"tetracyclic triterpenoid metabolism","type":"exact"}],"termid":"GO:0010685"}


id: PBO:0062196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily S member 2","termid":"PBO:0062196"}


id: PBO:0050542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxanthine phosphoribosyltransferase 1 pseudogene 3","termid":"PBO:0050542"}


id: PBO:0045567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 15","termid":"PBO:0045567"}


id: GO:0001039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a sequence of DNA that is a part of a hybrid type promoter that controls transcription by RNA polymerase III (Pol III). A hybrid Pol III promoter contains both regulatory elements both upstream and downstream of the transcription initiation site. An example gene with such a promoter is the S. cerevisiae U6 gene.","definition_xrefs":["GOC:txnOH","PMID:12381659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase III cis-regulatory region sequence-specific DNA binding","termid":"GO:0000992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003677","GO:0000976","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase III hybrid type promoter sequence-specific DNA binding","secondary_identifiers":["GO:0001037"],"synonyms":[{"name":"RNA polymerase III hybrid type promoter DNA binding","type":"related"}],"termid":"GO:0001039"}


id: PBO:0042139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 3","termid":"PBO:0042139"}


id: MONDO:0014068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cone-rod dystrophy that has material basis in variation in the chromosome region 10q26.","definition_xrefs":["PMID:22929024","DOID:0111023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cone-rod dystrophy 17","secondary_identifiers":["UMLS:C3554610","GARD:15914","MEDGEN:767524","OMIM:615163"],"synonyms":[{"name":"CORD17","type":"exact"},{"name":"cone-rod dystrophy 17","type":"exact"},{"name":"cone-rod dystrophy type 17","type":"exact"}],"termid":"MONDO:0014068","xrefs":{"Monarch":{"xref_id":"0014068"}}}


id: MONDO:0700075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital muscular dystrophy in which the cause of the disease is a variation in the POMGNT2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"},{"relation_name":"is_a","term_name":"myopathy caused by variation in POMGNT2","termid":"MONDO:0700069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002320","MONDO:0005336","MONDO:0024322"],"is_obsolete":false,"name":"congenital muscular dystrophy caused by variation in POMGNT2","synonyms":[{"name":"congenital muscular dystrophy caused by mutation in POMGNT2","type":"exact"},{"name":"congenital muscular dystrophy-POMGNT2 related","type":"exact"}],"termid":"MONDO:0700075","xrefs":{"Monarch":{"xref_id":"0700075"}}}


id: MONDO:1010839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gangliosidosis that occurs in emu.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gangliosidosis, non-human animal","termid":"MONDO:1010167"},{"relation_name":"is_a","term_name":"lysosomal storage disease, emu","termid":"MONDO:1010858"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gangliosidosis, emu","secondary_identifiers":["OMIA:000401-8790"],"termid":"MONDO:1010839","xrefs":{"Monarch":{"xref_id":"1010839"}}}


id: PBO:0075417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated antigen 4","termid":"PBO:0075417"}


id: PBO:0071759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P1 pseudogene 6","termid":"PBO:0071759"}


id: MONDO:0008648
data:
  {"annotated_genes":["SJAG_02717","SJAG_04781","SJAG_04901"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013529"},{"annotations":[86677,86678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013966"},{"annotations":[86193,86194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032915"}]},"cv_name":"mondo","definition":"An instance of ventricular tachycardia that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular tachycardia","termid":"MONDO:0005477"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02717":null,"SJAG_04781":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"ventricular tachycardia, familial","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:83309","GARD:2263","UMLS:C0340485","OMIM:192605","SCTID:233906007"],"synonyms":[{"name":"familial ventricular tachycardia","type":"related"},{"name":"hereditary ventricular tachycardia","type":"exact"},{"name":"ventricular tachycardia, familial","type":"exact"},{"name":"ventricular tachycardia, familial polymorphic","type":"related"},{"name":"ventricular tachycardia, idiopathic","type":"exact"}],"termid":"MONDO:0008648","terms_by_termid":{"MONDO:0013529":null,"MONDO:0013966":null,"MONDO:0032915":null},"xrefs":{"Monarch":{"xref_id":"0008648"}}}


id: PBO:0074010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 6 pseudogene 1","termid":"PBO:0074010"}


id: PBO:0005504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystathionine beta-lyase (predicted)","termid":"PBO:0005504"}


id: PBO:0056271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase alpha class 1A member 2","termid":"PBO:0056271"}


id: GO:0007124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which cells grow as a chain of physically attached, elongated cells in response to an environmental stimulus or stimuli.","definition_xrefs":["GOC:krc","PMID:24710476","PMID:11104818","PMID:19347739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell growth","termid":"GO:0016049"},{"relation_name":"is_a","term_name":"growth of unicellular organism as a thread of attached cells","termid":"GO:0070783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pseudohyphal growth","termid":"GO:0007124"}


id: PBO:0062466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 157 pseudogene","termid":"PBO:0062466"}


id: MONDO:0008644
data:
  {"annotated_genes":["SJAG_02317"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86618],"is_not":false,"summary":null,"term":"MONDO:0008644"}]},"cv_name":"mondo","definition":"A chromosomal disease that has material basis in deletion polymorphisms at chromosome location 22q11 and is characterized by variable developmental problems and schizoid features.","definition_xrefs":["PMID:PMID%3A+19243607","DOID:12583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"22q11.2 deletion syndrome","termid":"MONDO:0018923"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02317":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005267","MONDO:0005046"],"is_obsolete":false,"name":"velocardiofacial syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200688","UMLS:C0220704","MESH:D004062","GARD:15123","ICD9:758.32","MEDGEN:65085","NANDO:1200339","NANDO:2200712","OMIM:192430"],"synonyms":[{"name":"22q11 deletion syndrome","type":"exact"},{"name":"Shprintzen VCF syndrome","type":"exact"},{"name":"Shprintzen syndrome","type":"related"},{"name":"VCF syndrome","type":"exact"},{"name":"VCF-velocardiofacial syndrome","type":"exact"},{"name":"chromosome 22Q11.2 deletion syndrome","type":"related"},{"name":"deletion 22q11.2 syndrome","type":"exact"},{"name":"velocardiofacial syndrome","type":"exact"}],"termid":"MONDO:0008644","terms_by_termid":{"MONDO:0008644":null},"xrefs":{"Monarch":{"xref_id":"0008644"}}}


id: PBO:0027372
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_disulfide_oxidoreductase_activity","termid":"PBO:0027372"}


id: PATO:0000372
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000372 absolute distance value (obsolete PATO:0000372)","termid":"PATO:0000372"}


id: PBO:0064791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1K","termid":"PBO:0064791"}


id: PBO:0087943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation elongation factor eIF-5A; required for translation of proteins containing polyproline stretches, including Bni1p, and this leads to a requirement for mating projection formation; structural homolog of bacterial EF-P; undergoes an essential hypusination modification; HYP2 has a paralog, ANB1, that arose from the whole genome duplication; human EIF5A complements the inviability of the yeast hyp2 anb1 double null mutant","termid":"PBO:0087943"}


id: FYPO:0006992
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at the right outer repeat region (otr1R) of the centromere is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:26518661","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin silencing at centromere outer repeat","termid":"FYPO:0004742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal chromatin silencing at centromere otr1R","synonyms":[{"name":"normal centromere outer repeat region chromatin silencing at otr1R","type":"exact"},{"name":"normal chromatin silencing at centromere otr1R during mitotic cell cycle","type":"related"},{"name":"normal chromatin silencing at centromere otr1R during vegetative growth","type":"exact"},{"name":"normal chromatin silencing at centromere otr1R region","type":"exact"},{"name":"normal chromatin silencing at centromeric otr1R","type":"exact"},{"name":"normal chromatin silencing at pericentric region otr1R","type":"related"},{"name":"normal chromatin silencing at pericentromeric region otr1R","type":"related"},{"name":"normal heterochromatic silencing at centromere otr1R","type":"exact"},{"name":"normal heterochromatin silencing at centromere otr1R","type":"exact"}],"termid":"FYPO:0006992"}


id: MONDO:0005389
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sclerosing cholangitis (obsolete MONDO:0005389)","termid":"MONDO:0005389","xrefs":{"Monarch":{"xref_id":"0005389"}}}


id: GO:0010609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gene expression after the production of a mRNA transcript by its transport into, or maintenance in, a specific location within the cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular mRNA localization","termid":"GO:0008298"},{"relation_name":"is_a","term_name":"post-transcriptional regulation of gene expression","termid":"GO:0010608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"mRNA localization resulting in post-transcriptional regulation of gene expression","synonyms":[{"name":"mRNA localisation resulting in posttranscriptional regulation of gene expression","type":"exact"},{"name":"mRNA localization resulting in posttranscriptional regulation of gene expression","type":"exact"},{"name":"posttranscriptional regulation of gene expression by mRNA localisation","type":"exact"},{"name":"posttranscriptional regulation of gene expression by mRNA localization","type":"exact"}],"termid":"GO:0010609"}


id: PBO:0081118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger AN1-type containing 6 pseudogene 1","termid":"PBO:0081118"}


id: PBO:0060478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NANOGNB pseudogene 3","termid":"PBO:0060478"}


id: GO:1902306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sodium ion transmembrane transport.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:rl","GOC:mtg_cardiac_conduct_nov11","PMID:18591664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sodium ion transport","termid":"GO:0010766"},{"relation_name":"is_a","term_name":"regulation of sodium ion transmembrane transport","termid":"GO:1902305"},{"relation_name":"is_a","term_name":"negative regulation of cation transmembrane transport","termid":"GO:1904063"},{"relation_name":"negatively_regulates","term_name":"sodium ion transmembrane transport","termid":"GO:0035725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of sodium ion transmembrane transport","synonyms":[{"name":"down regulation of sodium ion membrane transport","type":"exact"},{"name":"down regulation of sodium ion transmembrane transport","type":"exact"},{"name":"down-regulation of sodium ion membrane transport","type":"exact"},{"name":"down-regulation of sodium ion transmembrane transport","type":"exact"},{"name":"downregulation of sodium ion membrane transport","type":"exact"},{"name":"downregulation of sodium ion transmembrane transport","type":"exact"},{"name":"inhibition of sodium ion membrane transport","type":"narrow"},{"name":"inhibition of sodium ion transmembrane transport","type":"narrow"},{"name":"negative regulation of sodium ion membrane transport","type":"exact"}],"termid":"GO:1902306"}


id: GO:0001958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Replacement ossification wherein bone tissue replaces cartilage.","definition_xrefs":["ISBN:0878932437","GO_REF:0000034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replacement ossification","termid":"GO:0036075"},{"relation_name":"part_of","term_name":"endochondral bone morphogenesis","termid":"GO:0060350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endochondral ossification","secondary_identifiers":["Wikipedia:Endochondral_ossification"],"termid":"GO:0001958"}


id: PBO:0061007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHS like 2","termid":"PBO:0061007"}


id: PBO:0053403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 333","termid":"PBO:0053403"}


id: PBO:0057516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 634","termid":"PBO:0057516"}


id: PBO:0002864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis-inducing factor homolog Aif1 (predicted)","termid":"PBO:0002864"}


id: MONDO:0004661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the tracheal mucosa and is confined to the epithelial layer without evidence of further tissue invasion.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trachea squamous cell carcinoma","termid":"MONDO:0001419"},{"relation_name":"is_a","term_name":"squamous carcinoma in situ","termid":"MONDO:0004693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"trachea carcinoma in situ","secondary_identifiers":["ICD10CM:D02.1","ICD9:231.1","NCIT:C3639","DOID:8802","SCTID:92772005","MEDGEN:57816","UMLS:C0154070"],"synonyms":[{"name":"carcinoma in situ of the trachea","type":"exact"},{"name":"carcinoma in situ of trachea","type":"exact"},{"name":"severe epithelial dysplasia of trachea","type":"exact"},{"name":"stage 0 trachea carcinoma","type":"exact"},{"name":"trachea carcinoma in situ","type":"exact"},{"name":"trachea in situ carcinoma","type":"exact"},{"name":"tracheal carcinoma in situ","type":"exact"}],"termid":"MONDO:0004661","xrefs":{"Monarch":{"xref_id":"0004661"}}}


id: PBO:0039773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 6","termid":"PBO:0039773"}


id: PBO:0077172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tolloid like 1","termid":"PBO:0077172"}


id: MONDO:0018345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete T+ B+ severe combined immunodeficiency (obsolete MONDO:0018345)","termid":"MONDO:0018345","xrefs":{"Monarch":{"xref_id":"0018345"}}}


id: PBO:0059861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein-like 3, pseudogene","termid":"PBO:0059861"}


id: GO:0097166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of lens epithelial cells, resulting in the expansion of a cell population. Lens epithelial cells make up the lens epithelium, which is located in the anterior portion of the lens between the lens capsule and the lens fibers and is a simple cuboidal epithelium. The epithelial cells of the lens regulate most of the homeostatic functions of the lens such as osmolarity and liquid volume. The lens epithelial cells also serve as the progenitors for new lens fibers. The lens epithelium constantly lays down fibers in the embryo, fetus, infant, and adult, and continues to lay down fibers for lifelong growth.","definition_xrefs":["GOC:yaf","CL:0002224","Wikipedia:Lens_%28anatomy%29#Lens_epithelium","PMID:18423449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"},{"relation_name":"part_of","term_name":"lens development in camera-type eye","termid":"GO:0002088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens epithelial cell proliferation","termid":"GO:0097166"}


id: PBO:0053143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A like 6E, pseudogene","termid":"PBO:0053143"}


id: PBO:0075634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 2D","termid":"PBO:0075634"}


id: FYPO:0001192
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which vegetative cell growth is normal (i.e. indistinguishable from wild type) in a medium containing one or more enzymes that degrades cell wall polysaccharides.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000257","FYPO:0002057","FYPO:0002058","FYPO:0000003","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on cell wall-degrading enzymes","secondary_identifiers":["FYPO:0001193"],"synonyms":[{"name":"normal cell population growth in presence of cell wall-degrading enzymes","type":"exact"},{"name":"normal cell population growth on Lyticase","type":"narrow"},{"name":"normal cell population growth on Novozyme 234","type":"narrow"},{"name":"normal cell population growth on Zymolyase","type":"narrow"},{"name":"normal cell population growth on beta-1,3-glucan laminaripentaohydrolase","type":"narrow"},{"name":"normal cell population growth on cell wall-degrading enzymes","type":"exact"},{"name":"normal cell population growth on lysing enzymes from Trichoderma harzianum","type":"narrow"},{"name":"normal cellular response to cell wall-degrading enzymes","type":"related"},{"name":"normal vegetative cell population growth on cell wall-degrading enzymes","type":"exact"}],"termid":"FYPO:0001192"}


id: PBO:0089880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Spf30","termid":"PBO:0089880"}


id: MONDO:0030619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 92","secondary_identifiers":["OMIM:619614","UMLS:C5562022","MEDGEN:1794232"],"synonyms":[{"name":"RP92","type":"exact"},{"name":"retinitis pigmentosa 92","type":"exact"}],"termid":"MONDO:0030619","xrefs":{"Monarch":{"xref_id":"0030619"}}}


id: PBO:0053614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 652","termid":"PBO:0053614"}


id: GO:2000446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of macrophage migration inhibitory factor signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"macrophage migration inhibitory factor signaling pathway","termid":"GO:0035691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of macrophage migration inhibitory factor signaling pathway","synonyms":[{"name":"regulation of MIF signaling pathway","type":"exact"},{"name":"regulation of macrophage migration inhibitory factor signalling pathway","type":"exact"}],"termid":"GO:2000446"}


id: PBO:0038932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor V1","termid":"PBO:0038932"}


id: MONDO:0006396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm that arises from the glandular epithelium of the rectal mucosa. It is characterized by a villous architectural pattern. The neoplastic glandular cells have dysplastic features.","definition_xrefs":["NCIT:C4919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"villous adenoma","termid":"MONDO:0000502"},{"relation_name":"is_a","term_name":"rectum adenoma","termid":"MONDO:0000530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"rectal villous adenoma","secondary_identifiers":["SCTID:312823001","UMLS:C0730199","EFO:1000506","MEDGEN:152675"],"synonyms":[{"name":"rectal villous adenoma","type":"exact"},{"name":"rectum villous adenoma","type":"exact"},{"name":"villous adenoma of rectum","type":"exact"},{"name":"villous adenoma of the rectum","type":"exact"}],"termid":"MONDO:0006396","xrefs":{"Monarch":{"xref_id":"0006396"}}}


id: PBO:0081991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 21","termid":"PBO:0081991"}


id: PBO:0004722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBF/Mak21 family (predicted)","termid":"PBO:0004722"}


id: PBO:0056837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B","termid":"PBO:0056837"}


id: PBO:0066654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIO kinase 2","termid":"PBO:0066654"}


id: PBO:0052358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 6","termid":"PBO:0052358"}


id: MONDO:0032801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"erythrokeratodermia variabilis","termid":"MONDO:0017851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"erythrokeratodermia variabilis et progressiva 6","secondary_identifiers":["DOID:0080766","OMIM:618531","UMLS:C5193144","GARD:18672","MEDGEN:1681026"],"synonyms":[{"name":"EKVP6","type":"related"},{"name":"ERYTHROKERATODERMIA VARIABILIS ET PROGRESSIVA 6","type":"related"}],"termid":"MONDO:0032801","xrefs":{"Monarch":{"xref_id":"0032801"}}}


id: MONDO:0003495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell tumor that arises from the ovary and is not associated with a germ cell tumor.","definition_xrefs":["NCIT:C40092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian epithelial tumor","termid":"MONDO:0002229"},{"relation_name":"is_a","term_name":"squamous cell neoplasm","termid":"MONDO:0002532"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian squamous cell neoplasm","secondary_identifiers":["DOID:5532"],"synonyms":[{"name":"ovarian squamous cell neoplasm","type":"exact"},{"name":"ovarian squamous cell tumor","type":"exact"},{"name":"ovarian squamous cell tumour","type":"exact"},{"name":"ovary squamous cell neoplasm","type":"exact"}],"termid":"MONDO:0003495","xrefs":{"Monarch":{"xref_id":"0003495"}}}


id: PBO:0083443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified, essential ORF ERG27/YLR100W","termid":"PBO:0083443"}


id: MONDO:0012128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any dextro-looped transposition of the great arteries in which the cause of the disease is a mutation in the MED13L gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dextro-looped transposition of the great arteries","termid":"MONDO:0019443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"transposition of the great arteries, dextro-looped","secondary_identifiers":["UMLS:C1837341","DOID:0060771","OMIM:608808","MESH:C563853","MEDGEN:332422"],"synonyms":[{"name":"D-TGA","type":"related"},{"name":"DTGA","type":"exact"},{"name":"DTGA1","type":"exact"},{"name":"MED13L dextro-looped transposition of the great arteries","type":"exact"},{"name":"dextro-looped transposition of the great arteries 1","type":"exact"},{"name":"dextro-looped transposition of the great arteries caused by mutation in MED13L","type":"exact"},{"name":"dextro-looped transposition of the great arteries type 1","type":"exact"},{"name":"transposition of the great arteries, dextro-looped 1","type":"related"},{"name":"transposition of the great arteries, dextro-looped type 1","type":"exact"}],"termid":"MONDO:0012128","xrefs":{"Monarch":{"xref_id":"0012128"}}}


id: PBO:0042329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD52 molecule","termid":"PBO:0042329"}


id: SO:0001479
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An enhancer trap construct is a type of engineered plasmid which is designed to integrate into a genome and express a reporter when the expression from a basic minimal promoter is enhanced by genomic enhancer elements. Enhancer traps contain promoter elements and are not usually mutagenic.","definition_xrefs":["ZFIN:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"engineered_plasmid","termid":"SO:0000637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer_trap_construct","synonyms":[{"name":"enhancer trap construct","type":"exact"}],"termid":"SO:0001479"}


id: PBO:0074693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 70C","termid":"PBO:0074693"}


id: MOD:00892
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to D-serine.","definition_xrefs":["PubMed:6893271","RESID:AA0195#CYS","PubMed:18025465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-serine","termid":"MOD:00891"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"D-serine (Cys)","synonyms":[{"name":"(R)-2-amino-3-hydroxypropanoic acid","type":"exact"},{"name":"D-serine","type":"exact"},{"name":"MOD_RES D-serine (Cys)","type":"exact"}],"termid":"MOD:00892"}


id: PATO:0000353
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000353 secondary product composition value (obsolete PATO:0000353)","termid":"PATO:0000353"}


id: MONDO:0016781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies due to 14q32.2 maternally expressed gene defect","termid":"MONDO:0016779"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternal 14q32.2 microdeletion syndrome","secondary_identifiers":["MEDGEN:1842712","Orphanet:254528","UMLS:C5679640","GARD:17221"],"synonyms":[{"name":"maternal del(14)(q32.2)","type":"exact"},{"name":"maternal monosomy 14q32.2","type":"exact"}],"termid":"MONDO:0016781","xrefs":{"Monarch":{"xref_id":"0016781"}}}


id: MONDO:0006780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tick-borne septicemic disease of domestic and wild ruminants caused by ehrlichia ruminantium.","definition_xrefs":["MESH:D006357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cattle disease","termid":"MONDO:0024913"},{"relation_name":"is_a","term_name":"ehrlichiosis, non-human animal","termid":"MONDO:0700205"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heartwater disease","synonyms":[{"name":"disease, heartwater","type":"related"}],"termid":"MONDO:0006780","xrefs":{"Monarch":{"xref_id":"0006780"}}}


id: PBO:0011081
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has fused lysosomes","termid":"PBO:0011081"}


id: PBO:0013800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase Ada1","termid":"PBO:0013800"}


id: PBO:0042128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical cancer associated DHX9 suppressive transcript","termid":"PBO:0042128"}


id: PBO:0111056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 22 (non-protein coding)","termid":"PBO:0111056"}


id: PBO:0049233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRM5 antisense RNA 1","termid":"PBO:0049233"}


id: PBO:0067921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 223","termid":"PBO:0067921"}


id: MOD:00732
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"a protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a xylose sugar group through a glycosidic bond","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosylated residue","termid":"MOD:00729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"xylosylated","synonyms":[{"name":"Xyl","type":"exact"}],"termid":"MOD:00732"}


id: MONDO:0012986
data:
  {"annotated_genes":["SJAG_02289"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84970],"is_not":false,"summary":null,"term":"MONDO:0012986"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral polymicrogyria","termid":"MONDO:0017091"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"bilateral parasagittal parieto-occipital polymicrogyria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:612691","icd11.foundation:293410499","Orphanet:208441","UMLS:C4013648","DOID:0080923","GARD:10785","MEDGEN:862085","MESH:C567201"],"synonyms":[{"name":"BTOP","type":"related"},{"name":"polymicrogyria, bilateral temporooccipital","type":"related"}],"termid":"MONDO:0012986","terms_by_termid":{"MONDO:0012986":null},"xrefs":{"Monarch":{"xref_id":"0012986"}}}


id: PBO:0116246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin ligase, makorin family","termid":"PBO:0116246"}


id: PBO:0084607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YPR090W was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YPR089W","termid":"PBO:0084607"}


id: PBO:0080567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat and FYVE domain containing 2","termid":"PBO:0080567"}


id: GO:1905343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cohesin unloading.","definition_xrefs":["PMID:26687354","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cohesin unloading (obsolete GO:1905343)","termid":"GO:1905343"}


id: MONDO:0003817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete peritoneal serous papillary adenocarcinoma (obsolete MONDO:0003817)","termid":"MONDO:0003817","xrefs":{"Monarch":{"xref_id":"0003817"}}}


id: GO:0098039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Process of transposition in which the existing element is replicated and one of the copies is excised and integrated at a new target site. Also referred to as copy-and-paste transposition.","definition_xrefs":["GOC:bm","PMID:1660177","PMID:10540284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA transposition","termid":"GO:0006313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"replicative DNA transposition","synonyms":[{"name":"copy-and-paste transposition","type":"exact"},{"name":"replicative transposition, DNA-mediated","type":"exact"},{"name":"transpositional DNA genome replication","type":"exact"}],"termid":"GO:0098039"}


id: GO:1900703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of orcinol biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of orcinol biosynthetic process","termid":"GO:1900701"},{"relation_name":"positively_regulates","term_name":"orcinol biosynthetic process","termid":"GO:0046197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of orcinol biosynthetic process","synonyms":[{"name":"activation of orcinol anabolism","type":"exact"},{"name":"activation of orcinol biosynthesis","type":"exact"},{"name":"activation of orcinol biosynthetic process","type":"narrow"},{"name":"activation of orcinol formation","type":"exact"},{"name":"activation of orcinol synthesis","type":"exact"},{"name":"positive regulation of orcinol anabolism","type":"exact"},{"name":"positive regulation of orcinol biosynthesis","type":"exact"},{"name":"positive regulation of orcinol formation","type":"exact"},{"name":"positive regulation of orcinol synthesis","type":"exact"},{"name":"up regulation of orcinol anabolism","type":"exact"},{"name":"up regulation of orcinol biosynthesis","type":"exact"},{"name":"up regulation of orcinol biosynthetic process","type":"exact"},{"name":"up regulation of orcinol formation","type":"exact"},{"name":"up regulation of orcinol synthesis","type":"exact"},{"name":"up-regulation of orcinol anabolism","type":"exact"},{"name":"up-regulation of orcinol biosynthesis","type":"exact"},{"name":"up-regulation of orcinol biosynthetic process","type":"exact"},{"name":"up-regulation of orcinol formation","type":"exact"},{"name":"up-regulation of orcinol synthesis","type":"exact"},{"name":"upregulation of orcinol anabolism","type":"exact"},{"name":"upregulation of orcinol biosynthesis","type":"exact"},{"name":"upregulation of orcinol biosynthetic process","type":"exact"},{"name":"upregulation of orcinol formation","type":"exact"},{"name":"upregulation of orcinol synthesis","type":"exact"}],"termid":"GO:1900703"}


id: PBO:0017792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation diffusion family zinc transmembrane transporter Cis4","termid":"PBO:0017792"}


id: PBO:0083623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin ligase; forms heterodimer with Rad6p to monoubiquitinate PCNA-K164; heterodimer binds single-stranded DNA and has single-stranded DNA dependent ATPase activity; required for postreplication repair; SUMO-targeted ubiquitin ligase (STUbl) that contains a SUMO-interacting motif (SIM) which stimulates its ubiquitin ligase activity towards the sumoylated form of PCNA","termid":"PBO:0083623"}


id: MONDO:0004882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A angioid streaks that involves the optic choroid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choroidal sclerosis","termid":"MONDO:0004885"},{"relation_name":"is_a","term_name":"angioid streaks","termid":"MONDO:0011782"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005559"],"is_obsolete":false,"name":"angioid streaks of choroid","secondary_identifiers":["UMLS:C0002983","ICD9:363.43","SCTID:86103006","MEDGEN:507444","DOID:979"],"synonyms":[{"name":"angioid streaks of optic choroid","type":"exact"},{"name":"optic choroid angioid streaks","type":"exact"}],"termid":"MONDO:0004882","xrefs":{"Monarch":{"xref_id":"0004882"}}}


id: PBO:0030285
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_sulfide_level","termid":"PBO:0030285"}


id: PBO:0051934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inter-alpha-trypsin inhibitor heavy chain 5","termid":"PBO:0051934"}


id: PBO:0058714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6842","termid":"PBO:0058714"}


id: GO:0034609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Insertion of the male copulatory spicules into the hermaphrodite. Spicule insertion behavior initiates when the male cloaca contacts the vulva. During most mating encounters, the spicule tips will prod the vulva continuously until they partially penetrate, which then causes the protractors to contract completely so that the spicules extend through the vulva.","definition_xrefs":["PMID:18050467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male mating behavior","termid":"GO:0060179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spicule insertion","termid":"GO:0034609"}


id: PBO:0075811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSBP3 antisense RNA 1","termid":"PBO:0075811"}


id: SO:0002238
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which codes for 5S_rRNA, which is a portion of the large subunit of the ribosome in both eukaryotes and prokaryotes.","direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA_gene","termid":"SO:0002361"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA_5S_gene","synonyms":[{"name":"5S rRNA gene","type":"exact"},{"name":"5S_rRNA_gene","type":"exact"}],"termid":"SO:0002238"}


id: PBO:0066057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rap guanine nucleotide exchange factor 2","termid":"PBO:0066057"}


id: PBO:0088195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc-finger transcription factor; involved in the diauxic shift; activates transcription of genes involved in carbon metabolism and energy production on glucose, while it activates transcription of genes involved in cell wall organization and biogenesis on glycerol-lactate; may also function as a co-repressor; capable of forming the prion [AZF1+]; relocalizes to the cytosol in response to hypoxia; contains polyglutamine and polyasparagine domains","termid":"PBO:0088195"}


id: GO:0061399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter in response to a cobalt ion stimulus.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to cobalt ion (obsolete GO:0061399)","termid":"GO:0061399"}


id: MOD:00880
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct with 6x(13)C labeled 4-sulfophenyl isothiocyanate.","definition_xrefs":["PubMed:16526082","Unimod:464","PubMed:15536630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-sulfophenyl isothiocyanate derivatized residue","termid":"MOD:00584"},{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C labeled 4-sulfophenyl isothiocyanate derivatized residue","synonyms":[{"name":"4-sulfophenyl isothiocyanate (Heavy C13)","type":"related"},{"name":"SPITC:13C(6)","type":"related"}],"termid":"MOD:00880"}


id: PBO:0069886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1175, pseudogene","termid":"PBO:0069886"}


id: GO:0003020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which information about the levels of oxygen are received and are converted to a molecular signal by chemoreceptors in the carotid bodies and the aortic bodies.","definition_xrefs":["GOC:mtg_cardio","ISBN:0323031951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hypoxia","termid":"GO:0070483"},{"relation_name":"part_of","term_name":"detection of hypoxic conditions in blood by chemoreceptor signaling","termid":"GO:0002007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of reduced oxygen by chemoreceptor signaling","synonyms":[{"name":"detection of reduced oxygen by chemoreceptor signalling","type":"exact"}],"termid":"GO:0003020"}


id: PBO:0003738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP dehydrogenase Gua1 (predicted)","termid":"PBO:0003738"}


id: PBO:0053603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 635","termid":"PBO:0053603"}


id: PATO:0001191
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the middle relative to another entity.","definition_xrefs":["PATOC:nw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medial to","termid":"PATO:0001191"}


id: PBO:0067754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 53","termid":"PBO:0067754"}


id: PATO:0001738
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's lacking physically interaction with another entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dissociated from","synonyms":[{"name":"dissociated","type":"exact"}],"termid":"PATO:0001738"}


id: PBO:0086574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; contains a BTB/POZ domain which generally function in protein interactions; deletion slightly improved competitive fitness in rich media; GFP-tagged protein is localized to the cytoplasm","termid":"PBO:0086574"}


id: GO:1901177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lycopene.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotene biosynthetic process","termid":"GO:0016120"},{"relation_name":"is_a","term_name":"lycopene metabolic process","termid":"GO:1901175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lycopene biosynthetic process","synonyms":[{"name":"lycopene anabolism","type":"exact"},{"name":"lycopene biosynthesis","type":"exact"},{"name":"lycopene formation","type":"exact"},{"name":"lycopene synthesis","type":"exact"}],"termid":"GO:1901177"}


id: PBO:0052613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRAB box domain containing 5","termid":"PBO:0052613"}


id: PBO:0005712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Utp23 (predicted)","termid":"PBO:0005712"}


id: GO:0032058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of translation initiation as a result of a stimulus indicating the organism is under stress.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translational initiation","termid":"GO:0045948"},{"relation_name":"part_of","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of translational initiation in response to stress","synonyms":[{"name":"activation of translation initiation in response to stress","type":"narrow"},{"name":"stimulation of translation initiation in response to stress","type":"narrow"},{"name":"up regulation of translation initiation in response to stress","type":"exact"},{"name":"up-regulation of translation initiation in response to stress","type":"exact"},{"name":"upregulation of translation initiation in response to stress","type":"exact"}],"termid":"GO:0032058"}


id: PBO:0083990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutathione-dependent oxidoreductase; hydroperoxide and superoxide-radical responsive monothiol glutaredoxin subfamily member with Grx4p and Grx5p; redundantly protects cells from oxidative damage along with GRX4 and GRX5; with Grx4p, promotes the dissociation of Aft1p from iron regulon gene promoters and subsequent nuclear export in iron-replete conditions, regulating iron homeostasis; involved with Grx4p in the deglutathionylation of Sir2p, restoring deacetylase activity after disulfide stress","termid":"PBO:0083990"}


id: PBO:0088973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall 1,3-beta-glucan synthase catalytic subunit Bgs3","termid":"PBO:0088973"}


id: GO:0070863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of directed movement of proteins from the endoplasmic reticulum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein exit from endoplasmic reticulum","termid":"GO:0070861"},{"relation_name":"is_a","term_name":"positive regulation of intracellular protein transport","termid":"GO:0090316"},{"relation_name":"positively_regulates","term_name":"protein exit from endoplasmic reticulum","termid":"GO:0032527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of protein exit from endoplasmic reticulum","synonyms":[{"name":"activation of protein exit from endoplasmic reticulum","type":"narrow"},{"name":"positive regulation of protein exit from ER","type":"exact"},{"name":"positive regulation of protein export from ER","type":"exact"},{"name":"positive regulation of protein export from endoplasmic reticulum","type":"exact"},{"name":"stimulation of protein exit from endoplasmic reticulum","type":"narrow"},{"name":"up regulation of protein exit from endoplasmic reticulum","type":"exact"},{"name":"up-regulation of protein exit from endoplasmic reticulum","type":"exact"},{"name":"upregulation of protein exit from endoplasmic reticulum","type":"exact"}],"termid":"GO:0070863"}


id: GO:1905851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of backward locomotion.","definition_xrefs":["PMID:11717360","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of locomotion","termid":"GO:0040013"},{"relation_name":"is_a","term_name":"regulation of backward locomotion","termid":"GO:0043058"},{"relation_name":"negatively_regulates","term_name":"backward locomotion","termid":"GO:0043057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of backward locomotion","synonyms":[{"name":"down regulation of backward locomotion","type":"exact"},{"name":"down-regulation of backward locomotion","type":"exact"},{"name":"downregulation of backward locomotion","type":"exact"},{"name":"inhibition of backward locomotion","type":"narrow"}],"termid":"GO:1905851"}


id: PBO:0051776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQCA1 antisense RNA 1","termid":"PBO:0051776"}


id: PR:Q7Z9I5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7Z9I5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.05","synonyms":[{"name":"Spom972h-wtf7","type":"exact"}],"termid":"PR:Q7Z9I5"}


id: PBO:0078583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 56","termid":"PBO:0078583"}


id: GO:0001308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process, which occurs as a dividing cell ages, leading to expression of genes that are typically not expressed due to silencing by regulatory proteins.","definition_xrefs":["GOC:jh","PMID:12044934"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of chromatin silencing involved in replicative cell aging (obsolete GO:0001308)","synonyms":[{"name":"loss of chromatin silencing during replicative cell ageing","type":"related"},{"name":"loss of chromatin silencing involved in replicative cell aging","type":"exact"}],"termid":"GO:0001308"}


id: PR:O75006
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec15 gene.","definition_xrefs":["UniProtKB:O75006","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component sec15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.01","synonyms":[{"name":"Spom972h-sec15","type":"exact"}],"termid":"PR:O75006"}


id: PBO:0005260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TREX complex subunit Tex1 (predicted)","termid":"PBO:0005260"}


id: PBO:0055259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2686","termid":"PBO:0055259"}


id: GO:0052066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The invasion by a symbiont of a host organism cell by utilizing the host phagocytosis mechanism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete entry of symbiont into host cell by promotion of host phagocytosis (obsolete GO:0052066)","synonyms":[{"name":"entry of organism into cell of other organism by promotion of phagocytosis in other organism during symbiotic interaction","type":"related"},{"name":"entry of organism into cell of other organism by promotion of phagocytosis in other organism involved in symbiotic interaction","type":"related"},{"name":"entry of organism into host cell by promotion of host phagocytosis","type":"exact"},{"name":"penetration of organism into host cell by promotion of host phagocytosis","type":"exact"},{"name":"penetration of symbiont into host cell by promotion of host phagocytosis","type":"exact"}],"termid":"GO:0052066"}


id: MONDO:1011070
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in long-tailed chinchilla.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis, non-human animal","termid":"MONDO:1010267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, long-tailed chinchilla","secondary_identifiers":["OMIA:001033-34839"],"termid":"MONDO:1011070","xrefs":{"Monarch":{"xref_id":"1011070"}}}


id: GO:1990160
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex consisting of the helicase loading complex DnaB-DnaC, replication restart proteins Rep and PriC, and associated DNA. Involved in the restart of DNA replication after a stalled replication fork has been repaired.","definition_xrefs":["GOC:bhm","PMID:8663105","PMID:19941825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-primosome complex","termid":"GO:1990099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DnaB-DnaC-Rep-PriC complex","synonyms":[{"name":"DnaB-DnaC-Rep-PriC preprimosome","type":"exact"},{"name":"phi-X174-type preprimosome","type":"related"}],"termid":"GO:1990160"}


id: GO:0030170
data:
  {"annotated_genes":["SJAG_04678","SJAG_03861","SJAG_03961","SJAG_01019","SJAG_03055","SJAG_02791","SJAG_01766","SJAG_00432","SJAG_00097","SJAG_02205","SJAG_00937","SJAG_04178","SJAG_00582","SJAG_02972","SJAG_04149","SJAG_04145","SJAG_00673","SJAG_03671","SJAG_03434","SJAG_03312","SJAG_00495","SJAG_03914","SJAG_00186","SJAG_03102","SJAG_02305","SJAG_03306","SJAG_05230","SJAG_04988","SJAG_00830","SJAG_00714"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59858,64238,65606,66986,68389,87319,88150,90788,91193,91704,92263,93117,93973,95264,97851,98525,98887,100337,101808,103098,103280,105033,106264,106372,109932,110001,110727,111308,113430,117886],"is_not":false,"summary":null,"term":"GO:0030170"}]},"cv_name":"molecular_function","definition":"Binding to pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"vitamin B6 binding","termid":"GO:0070279"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_00186":null,"SJAG_00432":null,"SJAG_00495":null,"SJAG_00582":null,"SJAG_00673":null,"SJAG_00714":null,"SJAG_00830":null,"SJAG_00937":null,"SJAG_01019":null,"SJAG_01766":null,"SJAG_02205":null,"SJAG_02305":null,"SJAG_02791":null,"SJAG_02972":null,"SJAG_03055":null,"SJAG_03102":null,"SJAG_03306":null,"SJAG_03312":null,"SJAG_03434":null,"SJAG_03671":null,"SJAG_03861":null,"SJAG_03914":null,"SJAG_03961":null,"SJAG_04145":null,"SJAG_04149":null,"SJAG_04178":null,"SJAG_04678":null,"SJAG_04988":null,"SJAG_05230":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"pyridoxal phosphate binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0030170","terms_by_termid":{"GO:0030170":null}}


id: GO:1904306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gastro-intestinal system smooth muscle contraction.","definition_xrefs":["PMID:10821044","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smooth muscle contraction","termid":"GO:0045987"},{"relation_name":"is_a","term_name":"regulation of gastro-intestinal system smooth muscle contraction","termid":"GO:1904304"},{"relation_name":"positively_regulates","term_name":"gastro-intestinal system smooth muscle contraction","termid":"GO:0014831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of gastro-intestinal system smooth muscle contraction","synonyms":[{"name":"activation of gastro-intestinal system smooth muscle contraction","type":"narrow"},{"name":"up regulation of gastro-intestinal system smooth muscle contraction","type":"exact"},{"name":"up-regulation of gastro-intestinal system smooth muscle contraction","type":"exact"},{"name":"upregulation of gastro-intestinal system smooth muscle contraction","type":"exact"}],"termid":"GO:1904306"}


id: PR:000037031
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein rho3 (Schizosaccharomyces pombe) that is non-covalently bound to GTP.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:24947517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP-binding protein rho3 (Schizosaccharomyces pombe)","termid":"PR:000037030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho3/GTP+","pombase_gene_id":"SPAC23C4.08","synonyms":[{"name":"PomBase_original_PRO_term_name: GTP-binding protein rho3, GTP-bound form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rho3/GTP+","type":"exact"},{"name":"rho3/GTP+","type":"exact"}],"termid":"PR:000037031"}


id: MONDO:0020001
data:
  {"annotated_genes":["SJAG_01370","SJAG_01065","SJAG_03847"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100104"},{"annotations":[85670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009670"},{"annotations":[86307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054565"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01065":null,"SJAG_01370":null,"SJAG_03847":null},"genotype_count":0,"is_obsolete":false,"name":"respiratory or thoracic malformation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:19385","Orphanet:97957","MEDGEN:1842800","UMLS:C5681559"],"termid":"MONDO:0020001","terms_by_termid":{"MONDO:0009670":null,"MONDO:0054565":null,"MONDO:0100104":null},"xrefs":{"Monarch":{"xref_id":"0020001"}}}


id: PBO:0049329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIF subunit 1","termid":"PBO:0049329"}


id: GO:0120534
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenylyl sulfate + dermatan = adenosine 3',5'-bisphosphate + dermatan sulfate.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan sulfotransferase activity","termid":"GO:0050698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016782","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"dermatan sulfotransferase activity","termid":"GO:0120534"}


id: FYPO:0005995
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature long non-coding RNA (lncRNA) measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased lncRNA level","synonyms":[{"name":"increased lncRNA accumulation","type":"related"},{"name":"increased lncRNA level during mitotic cell cycle","type":"related"},{"name":"increased lncRNA level during vegetative growth","type":"exact"},{"name":"increased lncRNA transcript level","type":"broad"},{"name":"increased long non-coding RNA level","type":"exact"},{"name":"increased mature lncRNA level","type":"exact"}],"termid":"FYPO:0005995"}


id: MONDO:0030994
data:
  {"annotated_genes":["SJAG_04335"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85058],"is_not":false,"summary":null,"term":"MONDO:0030994"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04335":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with or without autism or seizures","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1784023","OMIM:619239","UMLS:C5543225","GARD:18540"],"synonyms":[{"name":"NEDAUS","type":"exact"},{"name":"neurodevelopmental disorder with or without autism or seizures","type":"exact"}],"termid":"MONDO:0030994","terms_by_termid":{"MONDO:0030994":null},"xrefs":{"Monarch":{"xref_id":"0030994"}}}


id: PBO:0004280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Sec22 (predicted)","termid":"PBO:0004280"}


id: PBO:0084848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; homologous to bacterial L35 and human MRPL35 ribosomal proteins","termid":"PBO:0084848"}


id: GO:1905140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apical ectodermal ridge formation.","definition_xrefs":["PMID:18359901","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"apical ectodermal ridge formation","termid":"GO:1905139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of apical ectodermal ridge formation","synonyms":[{"name":"regulation of AER formation","type":"related"},{"name":"regulation of apical epidermal ridge formation","type":"exact"},{"name":"regulation of crista ectodermalis apicalis formation","type":"related"}],"termid":"GO:1905140"}


id: FYPO:0001202
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to calcium starvation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to stress during vegetative growth","termid":"FYPO:0000968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000298","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular response to calcium starvation","synonyms":[{"name":"normal cellular response to calcium depletion","type":"exact"},{"name":"normal cellular response to calcium deprivation","type":"exact"},{"name":"normal cellular response to calcium ion starvation","type":"exact"},{"name":"normal cellular response to calcium starvation during mitotic cell cycle","type":"related"},{"name":"normal cellular response to calcium starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0001202"}


id: MONDO:0859313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with speech impairment and with or without seizures","secondary_identifiers":["OMIM:620114","UMLS:C5774252","MEDGEN:1824025"],"termid":"MONDO:0859313","xrefs":{"Monarch":{"xref_id":"0859313"}}}


id: PBO:0030780
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_bismuth","termid":"PBO:0030780"}


id: MONDO:0019621
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic pneumonitis of infancy is a rare pediatric form of interstitial lung disease (ILD).","definition_xrefs":["Orphanet:91359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial lung disease specific to infancy","termid":"MONDO:0017019"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic pneumonitis of infancy","secondary_identifiers":["icd11.foundation:1821220054","SCTID:708026002","GARD:19166","UMLS:C3872848","MEDGEN:846677"],"synonyms":[{"name":"CPI","type":"exact"}],"termid":"MONDO:0019621","xrefs":{"Monarch":{"xref_id":"0019621"}}}


id: GO:0007007
data:
  {"annotated_genes":["SJAG_00687","SJAG_03282","SJAG_02002","SJAG_02656","SJAG_03502","SJAG_02524","SJAG_05300","SJAG_01405","SJAG_03633","SJAG_03515","SJAG_02028","SJAG_00404","SJAG_01917","SJAG_04208","SJAG_01640","SJAG_04996","SJAG_04237","SJAG_05302","SJAG_05241","SJAG_04965","SJAG_01120","SJAG_02501","SJAG_01949","SJAG_02398"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99757],"is_not":false,"summary":null,"term":"GO:0007007"},{"annotations":[88971,101201,106810,114134,117287,109514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042407"},{"annotations":[104395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990627"},{"annotations":[115765,107000,112690,102423,106786,107079,89870,92267,107057,88133,98928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045039"},{"annotations":[114191,98510,100413,88275,112842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the mitochondrial inner membrane.","definition_xrefs":["GOC:jl","GOC:dph","GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial membrane organization","termid":"GO:0007006"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00404":null,"SJAG_00687":null,"SJAG_01120":null,"SJAG_01405":null,"SJAG_01640":null,"SJAG_01917":null,"SJAG_01949":null,"SJAG_02002":null,"SJAG_02028":null,"SJAG_02398":null,"SJAG_02501":null,"SJAG_02524":null,"SJAG_02656":null,"SJAG_03282":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03633":null,"SJAG_04208":null,"SJAG_04237":null,"SJAG_04965":null,"SJAG_04996":null,"SJAG_05241":null,"SJAG_05300":null,"SJAG_05302":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0007005","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"inner mitochondrial membrane organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"inner mitochondrial membrane organisation","type":"exact"},{"name":"inner mitochondrial membrane organization and biogenesis","type":"related"},{"name":"mitochondrial inner membrane organization","type":"exact"}],"termid":"GO:0007007","terms_by_termid":{"GO:0007007":null,"GO:0032979":null,"GO:0042407":null,"GO:0045039":null,"GO:1990627":null}}


id: MONDO:0013250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive nonsyndromic deafness that has material basis in variation in the chromosome region 17p12-q11.2.","definition_xrefs":["PMID:19888295","DOID:0110531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 85","secondary_identifiers":["UMLS:C3160740","GARD:22635","MEDGEN:463629","OMIM:613392"],"synonyms":[{"name":"DFNB85","type":"narrow"},{"name":"autosomal recessive deafness 85","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 85","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 85","type":"narrow"},{"name":"deafness, autosomal recessive 85","type":"narrow"}],"termid":"MONDO:0013250","xrefs":{"Monarch":{"xref_id":"0013250"}}}


id: GO:0099042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The first step in clathrin-dependent endocytosis: invagination of the plasma membrane to form a pit.","definition_xrefs":["GOC:dos","GOC:vw","PMID:21779028"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleation of clathrin-coated pit (obsolete GO:0099042)","termid":"GO:0099042"}


id: PATO:0001099
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001099 relative force (obsolete PATO:0001099)","termid":"PATO:0001099"}


id: PBO:0079575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin D","termid":"PBO:0079575"}


id: GO:0018747
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phenanthrene-1,2-oxide + H2O = trans-1,2-dihydrodiolphenanthrene.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete phenanthrene-1,2-epoxide hydrolase activity (obsolete GO:0018747)","termid":"GO:0018747"}


id: PBO:0110813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, phosphate starvation genes Pho7","termid":"PBO:0110813"}


id: PATO:0001071
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001071 relative energy (obsolete PATO:0001071)","termid":"PATO:0001071"}


id: PBO:0091298
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae CRD1","termid":"PBO:0091298"}


id: PBO:0052189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNMA1 antisense RNA 2","termid":"PBO:0052189"}


id: GO:0061529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of epinephrine by a cell in which the epinephrine acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epinephrine secretion","termid":"GO:0048242"},{"relation_name":"is_a","term_name":"catecholamine secretion, neurotransmission","termid":"GO:0160043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"epinephrine secretion, neurotransmission","synonyms":[{"name":"adrenaline secretion, neurotransmission","type":"exact"}],"termid":"GO:0061529"}


id: PBO:0062844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoclast stimulating factor 1 pseudogene 1","termid":"PBO:0062844"}


id: MONDO:0002987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic inflammatory skin condition characterized by itchiness and a rash in the chest and abdominal areas. It affects males more than females and is usually contracted at a relatively young age. It is thought to be caused by an allergic reaction to food, insect bites, or medication.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"spongiotic dermatitis","secondary_identifiers":["UMLS:C0262984","NCIT:C27037","ICD9:692.9","DOID:4406","SCTID:23615008","MEDGEN:120468"],"termid":"MONDO:0002987","xrefs":{"Monarch":{"xref_id":"0002987"}}}


id: MONDO:0015388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polyrrhinia is an extremely rare, major congenital malformation characterized by complete duplication of the nose resulting in twofully developed noses often associated with choanal atresia, causing respiratory distress and necessitating surgical repair.","definition_xrefs":["Orphanet:141091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyrrhinia","secondary_identifiers":["GARD:19945","SCTID:716279002","UMLS:C4274730","icd11.foundation:142812177","MEDGEN:894825"],"synonyms":[{"name":"Double nose","type":"exact"},{"name":"Polyrhinia","type":"exact"}],"termid":"MONDO:0015388","xrefs":{"Monarch":{"xref_id":"0015388"}}}


id: PBO:0028419
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_nitrogen_starvation","termid":"PBO:0028419"}


id: PBO:0070280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 21","termid":"PBO:0070280"}


id: PBO:0000374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Valine","termid":"PBO:0000374"}


id: PBO:0042908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin 1 pseudogene 5","termid":"PBO:0042908"}


id: PBO:0054317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1709","termid":"PBO:0054317"}


id: FYPO:0005588
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a phosphoinositide measured in a cell is lower than normal. A phosphoinositide is any phosphatidylinositol that is phosphorylated at one or more of the hydroxy groups of inositol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phospholipid level","termid":"FYPO:0001289"},{"relation_name":"is_a","term_name":"altered cellular phosphoinositide level","termid":"FYPO:0001290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular phosphoinositide level","synonyms":[{"name":"decreased PI accumulation","type":"related"},{"name":"decreased cellular PI level","type":"related"},{"name":"decreased cellular phosphoinositide level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phosphoinositide level during vegetative growth","type":"exact"},{"name":"reduced cellular phosphoinositide level","type":"exact"}],"termid":"FYPO:0005588"}


id: PBO:0073167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SECIS binding protein 2 like","termid":"PBO:0073167"}


id: PBO:0089030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium transporting P-type ATPase P2 type, Pmc1","termid":"PBO:0089030"}


id: MONDO:0014319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any renal agenesis in which the cause of the disease is a mutation in the FGF20 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal agenesis","termid":"MONDO:0018470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal hypodysplasia/aplasia 2","secondary_identifiers":["UMLS:C3810359","OMIM:615721","MEDGEN:816689"],"synonyms":[{"name":"FGF20 renal agenesis (disease)","type":"exact"},{"name":"RHDA2","type":"related"},{"name":"renal agenesis (disease) caused by mutation in FGF20","type":"exact"},{"name":"renal hypodysplasia/aplasia 2","type":"exact"},{"name":"renal hypodysplasia/aplasia type 2","type":"exact"}],"termid":"MONDO:0014319","xrefs":{"Monarch":{"xref_id":"0014319"}}}


id: PBO:0079290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 8","termid":"PBO:0079290"}


id: GO:0062091
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex located in the chloroplast inner membrane and facing the stroma that is associated with the chloroplast inner membrane translocase complex and provides the ATPase motor activity to drive import of proteins into the chloroplast stroma.","definition_xrefs":["PMID:30309901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase complex","termid":"GO:1904949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Ycf2/FtsHi complex","synonyms":[{"name":"TIC complex associated chloroplast protein import motor","type":"exact"}],"termid":"GO:0062091"}


id: MONDO:0022895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"craniosynostosis cleft lip palate arthrogryposis","secondary_identifiers":["GARD:1590"],"termid":"MONDO:0022895","xrefs":{"Monarch":{"xref_id":"0022895"}}}


id: PBO:0075047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-10","termid":"PBO:0075047"}


id: PBO:0039472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 18B","termid":"PBO:0039472"}


id: PBO:0082796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the U5 snRNP complex; required for splicing of U3 precursors; originally described as a splicing factor specifically required for splicing pre-mRNA of the MATa1 cistron","termid":"PBO:0082796"}


id: GO:0010234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a tapetal cell of anthers in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:mg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"anther wall tapetum cell differentiation","termid":"GO:0048657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anther wall tapetum cell fate specification","synonyms":[{"name":"tapetal cell fate specification","type":"broad"}],"termid":"GO:0010234"}


id: MONDO:0019516
data:
  {"annotated_genes":["SJAG_02286"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013644"},{"annotations":[85940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013805"}]},"cv_name":"mondo","definition":"Familial exudative vitreoretinopathy (FEVR) is a rare hereditary vitreoretinal disorder characterized by abnormal or incomplete vascularization of the peripheral retina leading to variable clinical manifestations ranging from no effects to minor anomalies, or even retinal detachment with blindness.","definition_xrefs":["Orphanet:891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal vascular disorder","termid":"MONDO:0002311"},{"relation_name":"is_a","term_name":"vitreoretinal degeneration","termid":"MONDO:0020248"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02286":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005559"],"is_obsolete":false,"name":"exudative vitreoretinopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C580083","ICD9:362.10","DOID:0050535","SCTID:232063007","GARD:1613","OMIMPS:133780","UMLS:C0339539","MEDGEN:573220"],"synonyms":[{"name":"Criswick-Schepens syndrome","type":"exact"},{"name":"FEVR","type":"exact"},{"name":"exudative vitreoretinopathy, familial","type":"related"},{"name":"familial exudative vitreoretinopathy","type":"exact"}],"termid":"MONDO:0019516","terms_by_termid":{"MONDO:0013644":null,"MONDO:0013805":null},"xrefs":{"Monarch":{"xref_id":"0019516"}}}


id: PBO:0086809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YHR022C is not an essential gene","termid":"PBO:0086809"}


id: MONDO:0006552
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the hair follicles. Causes include excessive perspiration, skin infections, and skin wounds.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"disorder of pilosebaceous unit","termid":"MONDO:0002917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"folliculitis","secondary_identifiers":["MESH:D005499","EFO:1000702","SCTID:13600006","DOID:4409","MEDGEN:4752","Wikipedia:Folliculitis","NCIT:C94408","UMLS:C0016436","ICD9:704.8"],"synonyms":[{"name":"dermatitis of hair follicle","type":"exact"},{"name":"hair follicle dermatitis","type":"exact"}],"termid":"MONDO:0006552","xrefs":{"Monarch":{"xref_id":"0006552"}}}


id: GO:0015940
data:
  {"annotated_genes":["SJAG_04481","SJAG_03632","SJAG_05200","SJAG_00043","SJAG_03679"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88367,98236,98240,102256,112865],"is_not":false,"summary":null,"term":"GO:0015940"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pantothenate, the anion of pantothenic acid. It is a B complex vitamin that is a constituent of coenzyme A and is distributed ubiquitously in foods.","definition_xrefs":["GOC:ai","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pantothenate metabolic process","termid":"GO:0015939"},{"relation_name":"is_a","term_name":"water-soluble vitamin biosynthetic process","termid":"GO:0042364"},{"relation_name":"is_a","term_name":"modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_03632":null,"SJAG_03679":null,"SJAG_04481":null,"SJAG_05200":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pantothenate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0033317","GO:0033318"],"synonyms":[{"name":"pantothenate anabolism","type":"exact"},{"name":"pantothenate anabolism from 2-oxypantoyl lactone","type":"narrow"},{"name":"pantothenate anabolism from valine","type":"narrow"},{"name":"pantothenate biosynthesis","type":"exact"},{"name":"pantothenate biosynthesis from 2-oxypantoyl lactone","type":"narrow"},{"name":"pantothenate biosynthesis from valine","type":"narrow"},{"name":"pantothenate biosynthetic process from 2-dehydropantolactone","type":"narrow"},{"name":"pantothenate biosynthetic process from 2-oxypantoyl lactone","type":"narrow"},{"name":"pantothenate biosynthetic process from valine","type":"narrow"},{"name":"pantothenate formation","type":"exact"},{"name":"pantothenate formation from 2-oxypantoyl lactone","type":"narrow"},{"name":"pantothenate formation from valine","type":"narrow"},{"name":"pantothenate synthesis","type":"exact"},{"name":"pantothenate synthesis from 2-oxypantoyl lactone","type":"narrow"},{"name":"pantothenate synthesis from valine","type":"narrow"},{"name":"vitamin B5 biosynthesis","type":"exact"},{"name":"vitamin B5 biosynthetic process","type":"exact"}],"termid":"GO:0015940","terms_by_termid":{"GO:0015940":null}}


id: PBO:0064857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 15A","termid":"PBO:0064857"}


id: PBO:0038704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin alpha cardiac muscle 1","termid":"PBO:0038704"}


id: PBO:0045880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 delta pseudogene 4","termid":"PBO:0045880"}


id: MONDO:0016696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A WHO grade III oligodendroglioma with focal or diffuse malignant morphologic features (prominent nuclear pleomorphism, mitoses, and increased cellularity).","definition_xrefs":["NCIT:C4326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligodendroglial tumor","termid":"MONDO:0018744"},{"relation_name":"is_a","term_name":"anaplastic cancer","termid":"MONDO:0020633"},{"relation_name":"is_a","term_name":"grade III glioma","termid":"MONDO:0021640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"anaplastic oligodendroglioma","secondary_identifiers":["MEDGEN:90812","ICDO:9451/3","DOID:7154","EFO:0002501","ONCOTREE:AODG","Orphanet:251630","UMLS:C0334590","GARD:9472","MedDRA:10026659"],"synonyms":[{"name":"WHO grade III oligodendroglial neoplasm","type":"exact"},{"name":"WHO grade III oligodendroglial tumor","type":"exact"},{"name":"WHO grade III oligodendroglial tumour","type":"exact"},{"name":"anaplastic oligodendroglioma","type":"exact"},{"name":"malignant oligodendroglioma","type":"exact"},{"name":"oligodendroglioma, anaplastic, malignant","type":"exact"},{"name":"oligodendroglioma, malignant","type":"exact"},{"name":"undifferentiated oligodendroglioma","type":"exact"}],"termid":"MONDO:0016696","xrefs":{"Monarch":{"xref_id":"0016696"}}}


id: PBO:0079860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-119 lipid binding chaperone","termid":"PBO:0079860"}


id: MONDO:0100340
data:
  {"annotated_genes":["SJAG_03862"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85033],"is_not":false,"summary":null,"term":"MONDO:0100340"}]},"cv_name":"mondo","definition":"Any Friedreich ataxia in which the cause of the disease is a mutation in the FXN gene.","definition_xrefs":["OMIM:229300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Friedreich ataxia","termid":"MONDO:0100339"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03862":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Friedreich ataxia 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111218","MEDGEN:383962","UMLS:C1856689","MESH:C565561"],"synonyms":[{"name":"FRDA1","type":"exact"},{"name":"Friedreich ataxia","type":"broad"},{"name":"Friedreich ataxia 1","type":"exact"},{"name":"Friedreich ataxia type 1","type":"exact"}],"termid":"MONDO:0100340","terms_by_termid":{"MONDO:0100340":null},"xrefs":{"Monarch":{"xref_id":"0100340"}}}


id: GO:0000338
data:
  {"annotated_genes":["SJAG_04948","SJAG_05977","SJAG_00795","SJAG_00776","SJAG_02341","SJAG_03733","SJAG_00720","SJAG_03325","SJAG_02764","SJAG_04011"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89114,90939,92367,92489,94780,100813,104785,105982,108482,109826],"is_not":false,"summary":null,"term":"GO:0000338"}]},"cv_name":"biological_process","definition":"The removal of a ubiquitin-like protein of the NEDD8 type from a protein.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification by small protein removal","termid":"GO:0070646"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00720":null,"SJAG_00776":null,"SJAG_00795":null,"SJAG_02341":null,"SJAG_02764":null,"SJAG_03325":null,"SJAG_03733":null,"SJAG_04011":null,"SJAG_04948":null,"SJAG_05977":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein deneddylation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0010388"],"synonyms":[{"name":"cullin deneddylation","type":"narrow"}],"termid":"GO:0000338","terms_by_termid":{"GO:0000338":null}}


id: MONDO:0003095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare mucoepidermoid carcinoma of the larynx. It usually arises from the supraglottic area. Hoarseness and dysphagia are the presenting symptoms.","definition_xrefs":["NCIT:C9463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal carcinoma","termid":"MONDO:0002358"},{"relation_name":"is_a","term_name":"mucoepidermoid carcinoma","termid":"MONDO:0003036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"laryngeal mucoepidermoid carcinoma","secondary_identifiers":["DOID:4688","MEDGEN:272792","UMLS:C1334373"],"synonyms":[{"name":"laryngeal mucoepidermoid carcinoma","type":"exact"},{"name":"laryngeal throat mucoepidermoid cancer","type":"exact"},{"name":"larynx mucoepidermoid carcinoma","type":"exact"},{"name":"mucoepidermoid carcinoma of larynx","type":"exact"},{"name":"mucoepidermoid carcinoma of the larynx","type":"exact"}],"termid":"MONDO:0003095","xrefs":{"Monarch":{"xref_id":"0003095"}}}


id: GO:0050218
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + propanoate + CoA = AMP + diphosphate + propanoyl-CoA.","definition_xrefs":["MetaCyc:PROPIONATE--COA-LIGASE-RXN","EC:6.2.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acid-CoA ligase activity","termid":"GO:0031955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"propionate-CoA ligase activity","secondary_identifiers":["RHEA:20373"],"synonyms":[{"name":"propanoate:CoA ligase (AMP-forming)","type":"related"},{"name":"propionyl-CoA synthetase activity","type":"related"}],"termid":"GO:0050218"}


id: PBO:0029565
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-binucleate_monoseptate_cell,_with_angled_septum","termid":"PBO:0029565"}


id: MONDO:0100441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinopathy caused by a heterozygous gain of function or dominant-negative variant or in the GUCY2D gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"GUCY2D retinopathy","termid":"MONDO:0100454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005328"],"is_obsolete":false,"name":"GUCY2D-related dominant retinopathy","synonyms":[{"name":"CACD1","type":"narrow"},{"name":"CORD6","type":"narrow"},{"name":"GUCY2D central areolar choroidal dystrophy","type":"narrow"},{"name":"GUCY2D cone-rod dystrophy","type":"narrow"},{"name":"RCD2","type":"narrow"},{"name":"central areolar choroidal dystrophy caused by mutation in GUCY2D","type":"narrow"},{"name":"choroidal dystrophy, central areolar","type":"narrow"},{"name":"choroidal dystrophy, central areolar, 1","type":"narrow"},{"name":"choroidal sclerosis","type":"narrow"},{"name":"cone-rod dystrophy 6","type":"narrow"},{"name":"cone-rod dystrophy caused by mutation in GUCY2D","type":"narrow"},{"name":"cone-rod dystrophy type 6","type":"narrow"},{"name":"dominant GUCY2D retinopathy","type":"exact"},{"name":"retinal cone dystrophy 2","type":"narrow"}],"termid":"MONDO:0100441","xrefs":{"Monarch":{"xref_id":"0100441"}}}


id: MONDO:0006273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low grade fibromyxoid sarcoma characterized by the presence of prominent collagen rosettes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"low grade fibromyxoid sarcoma","termid":"MONDO:0006272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"low grade fibromyxoid sarcoma with giant collagen rosettes","secondary_identifiers":["MEDGEN:310942","EFO:1000329","UMLS:C1708749","NCIT:C45203"],"synonyms":[{"name":"hyalinizing spindle cell tumor with giant Rosettes","type":"exact"},{"name":"hyalinizing spindle cell tumour with giant Rosettes","type":"exact"}],"termid":"MONDO:0006273","xrefs":{"Monarch":{"xref_id":"0006273"}}}


id: MONDO:0014764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spastic paraplegia-severe developmental delay-epilepsy syndrome is a rare, genetic, complex spastic paraplegia disorder characterized by an infantile-onset of psychomotor developmental delay with severe intellectual disability and poor speech acquisition, associated with seizures (mostly myoclonic), muscular hypotonia which may be noted at birth, and slowly progressive spasticity in the lower limbs leading to severe gait disturbances. Ocular abnormalities and incontinence are commonly associated. Other symptoms may include verbal dyspraxia, hypogenitalism, macrocephaly and sensorineural hearing loss, as well as dystonic movements and ataxia with upper limb involvement.","definition_xrefs":["Orphanet:464282"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"monogenic epilepsy","termid":"MONDO:0015653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0005559","MONDO:0002320"],"is_obsolete":false,"name":"spastic paraplegia-severe developmental delay-epilepsy syndrome","secondary_identifiers":["GARD:17816","OMIM:616756","UMLS:C4225215","MEDGEN:897828"],"synonyms":[{"name":"SPPRS","type":"related"},{"name":"SPPRS syndrome","type":"exact"},{"name":"spastic paraplegia and psychomotor retardation with or without seizures","type":"related"},{"name":"spastic paraplegia-psychomotor retardation-seizures syndrome","type":"exact"}],"termid":"MONDO:0014764","xrefs":{"Monarch":{"xref_id":"0014764"}}}


id: MONDO:0009105
data:
  {"annotated_genes":["SJAG_03805","SJAG_04118"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024541"},{"annotations":[85769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013818"}]},"cv_name":"mondo","definition":"A severe congenital enteropathy manifesting as intractable diarrhea in the first month of life with failure to thrive and associated with facial dysmorphism, hair abnormalities, and, in some cases, immune disorders and intrauterine growth restriction.","definition_xrefs":["Orphanet:84064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"},{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"type 1 interferonopathy of childhood","termid":"MONDO:0957408"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03805":null,"SJAG_04118":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"trichohepatoenteric syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1470910753","DOID:0111414","OMIMPS:222470","SCTID:703406006","GARD:5258","MEDGEN:347405","UMLS:C1857276"],"synonyms":[{"name":"SD/THE","type":"exact"},{"name":"Syndromatic diarrhea","type":"related"},{"name":"Syndromatic diarrhoea","type":"related"},{"name":"THES1","type":"related"},{"name":"Tricho-hepato-enteric syndrome","type":"exact"},{"name":"Trichohepatoenteric syndrome","type":"exact"},{"name":"Trichohepatoenteric syndrome type 1","type":"exact"},{"name":"phenotypic diarrhea","type":"exact"},{"name":"phenotypic diarrhoea","type":"exact"},{"name":"syndromic diarrhea","type":"exact"},{"name":"syndromic diarrhea/Tricho-hepato-enteric syndrome","type":"exact"},{"name":"syndromic diarrhoea","type":"exact"}],"termid":"MONDO:0009105","terms_by_termid":{"MONDO:0013818":null,"MONDO:0024541":null},"xrefs":{"Monarch":{"xref_id":"0009105"}}}


id: MONDO:0004752
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neurofibroma that affects the heart.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart cancer","termid":"MONDO:0001340"},{"relation_name":"is_a","term_name":"neurofibroma","termid":"MONDO:0016755"},{"relation_name":"is_a","term_name":"peripheral nervous system cancer","termid":"MONDO:0021089"},{"relation_name":"is_a","term_name":"malignant glioma","termid":"MONDO:0100342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005267"],"is_obsolete":false,"name":"neurofibroma of the heart","secondary_identifiers":["UMLS:C1096349","NCIT:C5359","DOID:9300","MEDGEN:242755"],"synonyms":[{"name":"Cardiac neurofibroma","type":"exact"},{"name":"heart neurofibroma","type":"exact"},{"name":"neurofibroma of heart","type":"exact"},{"name":"neurofibroma of the heart","type":"exact"}],"termid":"MONDO:0004752","xrefs":{"Monarch":{"xref_id":"0004752"}}}


id: PR:000027523
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the yeast SLD2 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:CNA","PMID:11937031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication regulator sld2","pombase_gene_id":"SPAC6B12.11","synonyms":[{"name":"DNA replication and checkpoint protein 1","type":"exact"},{"name":"DRC1","type":"related"},{"name":"SLD2","type":"exact"}],"termid":"PR:000027523"}


id: PBO:0047974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRG1 divergent transcript","termid":"PBO:0047974"}


id: PBO:0043306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clathrin heavy chain linker domain containing 1","termid":"PBO:0043306"}


id: PomGeneEx:0000004
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneEx","definition":"A gene expression qualifier that indicates that an RNA or protein is present at the same level or produced at the same rate under one set of conditions or at one indicated time as otherwise.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression qualifier","termid":"PomGeneEx:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unchanged","synonyms":[{"name":"gene expression unchanged","type":"exact"},{"name":"gene product level unchanged","type":"exact"}],"termid":"PomGeneEx:0000004"}


id: PBO:0075399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SP140 nuclear body protein","termid":"PBO:0075399"}


id: GO:0033210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by leptin binding to its receptor on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription. Leptin is a hormone manufactured primarily in the adipocytes of white adipose tissue, and the level of circulating leptin is directly proportional to the total amount of fat in the body.","definition_xrefs":["GOC:yaf","GOC:signaling","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to leptin stimulus","termid":"GO:0044320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"leptin-mediated signaling pathway","synonyms":[{"name":"adipocytokine signaling pathway","type":"related"},{"name":"leptin-mediated signalling pathway","type":"exact"}],"termid":"GO:0033210"}


id: MONDO:0016782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"motor developmental delay due to 14q32.2 paternally expressed gene defect","termid":"MONDO:0014541"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternal 14q32.2 hypomethylation syndrome","secondary_identifiers":["MEDGEN:1842839","GARD:17222","Orphanet:254531","UMLS:C5680721"],"termid":"MONDO:0016782","xrefs":{"Monarch":{"xref_id":"0016782"}}}


id: MONDO:0004822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Segmental, irreversible dilation of the bronchial tree resulting in the accumulation of secretions which leads to obstruction. The most common cause is bacterial infection.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bronchial disorder","termid":"MONDO:0001358"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"chronic obstructive pulmonary disease","termid":"MONDO:0005002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bronchiectasis","secondary_identifiers":["NANDO:2100036","DOID:9563","NANDO:2200206","MEDGEN:14234","SCTID:12295008","ICD9:494","icd11.foundation:1935524933","MESH:D001987","ICD10CM:J47","NCIT:C84475","OMIMPS:211400","UMLS:C0006267"],"synonyms":[{"name":"Polynesian bronchiectasis","type":"exact"}],"termid":"MONDO:0004822","xrefs":{"Monarch":{"xref_id":"0004822"}}}


id: PBO:0048991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glypican 3","termid":"PBO:0048991"}


id: PBO:0002627
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements human PIGW","termid":"PBO:0002627"}


id: PBO:0076655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 18","termid":"PBO:0076655"}


id: PBO:0064756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPIA pseudogene 93","termid":"PBO:0064756"}


id: PBO:0065039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELID1 pseudogene 4","termid":"PBO:0065039"}


id: PR:000049981
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair protein rad9 (Schizosaccharomyces pombe) that has been phosphorylated on a residue equivalent to Thr-412 of the amino acid sequence represented by UniProtKB:P26306. Example: UniProtKB:P26306, Thr-412, MOD:00046.","definition_xrefs":["PMID:21561865","PomBase:MAH","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair protein rad9 (Schizosaccharomyces pombe)","termid":"PR:000044575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rad9 phosphorylated 2 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC664.07c","termid":"PR:000049981"}


id: MONDO:0012275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fetal valproate syndrome (FVS), is an anticonvulsant drug-related embryofetopathy that can occur when a fetus is exposed to valproic acid (VPA), characterized by distinct facial dysmorphism, congenital anomalies and developmental delay (especially in language and communication).","definition_xrefs":["Orphanet:1906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetal valproate syndrome","secondary_identifiers":["DOID:0060471","OMIM:609442","UMLS:C0236026","MESH:C536525","NCIT:C98930","MedDRA:10016524","NORD:1141","MEDGEN:65922","GARD:5447","icd11.foundation:1055155432","ICD9:759.89","SCTID:17231009"],"synonyms":[{"name":"FVS","type":"related"},{"name":"fetal valproate syndrome","type":"exact"},{"name":"fetal valproic acid syndrome","type":"exact"},{"name":"foetal valproic acid syndrome","type":"exact"},{"name":"susceptibility to valproate embryopathy","type":"related"},{"name":"valproate embryopathy, susceptibility to","type":"related"},{"name":"valproic acid embryopathy","type":"related"}],"termid":"MONDO:0012275","xrefs":{"Monarch":{"xref_id":"0012275"}}}


id: PBO:0054447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1844","termid":"PBO:0054447"}


id: PBO:0044521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DAB1 antisense RNA 1","termid":"PBO:0044521"}


id: PBO:0052592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin subunit alpha 2 pseudogene 1","termid":"PBO:0052592"}


id: FYPO:0004573
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119113,119115],"is_not":false,"summary":null,"term":"FYPO:0004573"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of non-coding RNA transcribed from telomeric regions measured in a cell is higher than normal.","definition_xrefs":["SO:0001927","PMID:25398909","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":2,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02621","SJAG_03118","SJAG_03689"],"name":"increased telomeric transcript level","references_by_uniquename":{"PMID:35226668":null},"synonyms":[{"name":"increased telomeric lncRNA level","type":"exact"},{"name":"increased telomeric transcript accumulation","type":"related"},{"name":"increased telomeric transcript level during mitotic cell cycle","type":"related"},{"name":"increased telomeric transcript level during vegetative growth","type":"exact"}],"termid":"FYPO:0004573","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004573":null}}


id: MONDO:0002834
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An urothelial carcinoma that arises from the urothelial lining of the prostatic ducts or the prostatic urethra.","definition_xrefs":["NCIT:C39898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostate carcinoma","termid":"MONDO:0005159"},{"relation_name":"is_a","term_name":"transitional cell carcinoma","termid":"MONDO:0006474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"primary prostate urothelial carcinoma","secondary_identifiers":["MEDGEN:271382","DOID:4011","UMLS:C1514430"],"synonyms":[{"name":"primary prostate urothelial cancer","type":"exact"},{"name":"primary prostate urothelial carcinoma","type":"exact"},{"name":"prostate gland transitional cell carcinoma","type":"exact"},{"name":"prostate transitional cell carcinoma","type":"exact"},{"name":"prostate urothelial carcinoma","type":"exact"},{"name":"transitional cell carcinoma of prostate","type":"exact"},{"name":"transitional cell carcinoma of the prostate","type":"exact"}],"termid":"MONDO:0002834","xrefs":{"Monarch":{"xref_id":"0002834"}}}


id: PBO:0057384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548az","termid":"PBO:0057384"}


id: PBO:0054880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2294","termid":"PBO:0054880"}


id: MONDO:0009722
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bailey-Bloch congenital myopathy is a neuromuscular disorder characterized by weakness, arthrogryposis, kyphoscoliosis, short stature, cleft palate, ptosis and susceptibility to malignant hyperthermia during anesthesia.","definition_xrefs":["Orphanet:168572"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"Bailey-Bloch congenital myopathy","secondary_identifiers":["DOID:0060346","GARD:8432","MEDGEN:340586","SCTID:723439002","UMLS:C1850625","MESH:C538343","OMIM:255995"],"synonyms":[{"name":"Bailey-Bloch congenital myopathy","type":"exact"},{"name":"NAM","type":"related"},{"name":"Native American myopathy","type":"exact"},{"name":"STAC3 disorder","type":"exact"},{"name":"congenital myopathy - cleft palate - malignant hyperthermia","type":"related"},{"name":"congenital myopathy cleft palate and malignant hyperthermia","type":"related"},{"name":"congenital myopathy-cleft palate-malignant hyperthermia syndrome","type":"exact"},{"name":"myopathy, congenital, baily-bloch","type":"exact"},{"name":"myopathy, congenital, with cleft palate and malignant hyperthermia","type":"related"}],"termid":"MONDO:0009722","xrefs":{"Monarch":{"xref_id":"0009722"}}}


id: PBO:0053156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase D","termid":"PBO:0053156"}


id: MONDO:0014400
data:
  {"annotated_genes":["SJAG_00531"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85766],"is_not":false,"summary":null,"term":"MONDO:0014400"}]},"cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the PRPF4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00531":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 70","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110392","OMIM:615922","GARD:16032","ICD10CM:H35.5","MEDGEN:863118","UMLS:C4014681"],"synonyms":[{"name":"PRPF4 retinitis pigmentosa","type":"exact"},{"name":"RP70","type":"exact"},{"name":"retinitis pigmentosa 70","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in PRPF4","type":"exact"},{"name":"retinitis pigmentosa type 70","type":"exact"}],"termid":"MONDO:0014400","terms_by_termid":{"MONDO:0014400":null},"xrefs":{"Monarch":{"xref_id":"0014400"}}}


id: MOD:00695
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a sulfonyl group for the hydrogen atom of a hydroxyl or sulfanyl group.","definition_xrefs":["PubMed:14752058","DeltaMass:0","Unimod:40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfated residue","synonyms":[{"name":"O-Sulfonation","type":"related"},{"name":"SulfRes","type":"exact"},{"name":"Sulfo","type":"related"},{"name":"Sulphonation (SO3H) (of PMC group)","type":"exact"}],"termid":"MOD:00695"}


id: PBO:0067626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 798, pseudogene","termid":"PBO:0067626"}


id: PBO:0069443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 708, pseudogene","termid":"PBO:0069443"}


id: PR:O74845
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hif2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"set3 complex subunit hif2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.09","synonyms":[{"name":"Spom972h-hif2","type":"exact"}],"termid":"PR:O74845"}


id: MONDO:0014769
data:
  {"annotated_genes":["SJAG_03854","SJAG_01680","SJAG_07002","SJAG_04003","SJAG_00666","SJAG_04280","SJAG_04682"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030925"},{"annotations":[85078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859330"},{"annotations":[86065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859521"},{"annotations":[85422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0021573"},{"annotations":[85512,85513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020837"},{"annotations":[85533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957961"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"infertility disorder","termid":"MONDO:0005047"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00666":null,"SJAG_01680":null,"SJAG_03854":null,"SJAG_04003":null,"SJAG_04280":null,"SJAG_04682":null,"SJAG_07002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"inherited oocyte maturation defect","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:615774"],"synonyms":[{"name":"OOMD","type":"related"},{"name":"oocyte maturation defect","type":"exact"}],"termid":"MONDO:0014769","terms_by_termid":{"MONDO:0020837":null,"MONDO:0021573":null,"MONDO:0030925":null,"MONDO:0859330":null,"MONDO:0859521":null,"MONDO:0957961":null},"xrefs":{"Monarch":{"xref_id":"0014769"}}}


id: MONDO:0100370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A new infection by the hepatitis B virus, which can be transmitted by direct contact of infected blood with mucous membranes or open areas of the skin. Signs and symptoms may include loss of appetite, joint and muscle pain, low-grade fever and stomach pain. Two to six percent of adults progress to a chronic infection, while 90% of infants become chronically ill. A vaccine is available for those at risk.","definition_xrefs":["NCIT:C157781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatitis B virus infection","termid":"MONDO:0005344"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"acute hepatitis B virus infection","synonyms":[{"name":"acute hepatitis B","type":"exact"}],"termid":"MONDO:0100370","xrefs":{"Monarch":{"xref_id":"0100370"}}}


id: MONDO:1011936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthritis deformans, non-human animal","secondary_identifiers":["OMIA:000065"],"termid":"MONDO:1011936","xrefs":{"Monarch":{"xref_id":"1011936"}}}


id: GO:0089710
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a endocytic signal sequence, a specific peptide sequence, of 4-6 amino acids with an essential tyrosine (Y), found on cytoplasmic tails of some cell surface membrane proteins, which directs internalization by clathrin-coated pits.","definition_xrefs":["PMID:8918456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"endocytic targeting sequence binding","termid":"GO:0089710"}


id: MONDO:0044646
data:
  {"annotated_genes":["SJAG_04074"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86679],"is_not":false,"summary":null,"term":"MONDO:0044646"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"neurodegenerative disease","termid":"MONDO:0005559"},{"relation_name":"excluded_subClassOf","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"},{"relation_name":"is_a","term_name":"Mendelian encephalopathy","termid":"MONDO:0100198"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04074":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002320"],"is_obsolete":false,"name":"early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:934638","DOID:0070423","Orphanet:496641","UMLS:C4310671","GARD:17911","OMIM:617193"],"synonyms":[{"name":"PEBAT","type":"exact"},{"name":"encephalopathy, progressive, early-onset, with brain atrophy and thin corpus callosum","type":"exact"},{"name":"encephalopathy, progressive, early-onset, with brain atrophy and thin corpus callosum; PEBAT","type":"exact"}],"termid":"MONDO:0044646","terms_by_termid":{"MONDO:0044646":null},"xrefs":{"Monarch":{"xref_id":"0044646"}}}


id: GO:0019934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette that starts with production of cyclic GMP (cGMP), and ends with activation of downstream effectors that further transmit the signal within the cell.","definition_xrefs":["GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signaling cassette","termid":"GO:0141124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cGMP-mediated signaling","synonyms":[{"name":"cGMP-mediated signalling","type":"exact"}],"termid":"GO:0019934"}


id: PR:O74783
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An F-box/LRR-repeat protein 14 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03350","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCF E3 ubiquitin ligase complex F-box protein pof2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25B2.11","secondary_identifiers":["UniProtKB:O74783"],"synonyms":[{"name":"F-box and leucine-rich repeat protein pof2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"F-box protein pof2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"F-box/LRR-repeat protein pof2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FBXL14","type":"exact"}],"termid":"PR:O74783"}


id: PBO:0043421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNEP1R1 pseudogene 1","termid":"PBO:0043421"}


id: MONDO:1010939
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malignant histiocytosis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant histiocytosis, non-human animal","termid":"MONDO:1010210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant histiocytosis, dog","secondary_identifiers":["OMIA:000620-9615"],"termid":"MONDO:1010939","xrefs":{"Monarch":{"xref_id":"1010939"}}}


id: PATO:0002321
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"superelliptic","termid":"PATO:0002318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoelliptic","termid":"PATO:0002321"}


id: PBO:0038619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaline ceramidase 1","termid":"PBO:0038619"}


id: GO:0097136
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of members of the Bcl-2 family of anti- and proapoptotic regulators. Bcl-2 proteins respond to cues from various forms of intracellular stress, such as DNA damage or cytokine deprivation, and interact with opposing family members to determine whether or not the caspase proteolytic cascade should be unleashed.","definition_xrefs":["GOC:so","PMID:14634621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Bcl-2 family protein complex","termid":"GO:0097136"}


id: GO:0052318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of phytoalexin metabolism, the chemical reactions and pathways involving phytoalexins, any of a range of substances produced by plants as part of their defense response.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phytoalexin metabolic process (obsolete GO:0052318)","synonyms":[{"name":"regulation of phytoalexin metabolism","type":"exact"}],"termid":"GO:0052318"}


id: GO:0071378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth hormone stimulus. Growth hormone is a peptide hormone that binds to the growth hormone receptor and stimulates growth.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to growth hormone","termid":"GO:0060416"},{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to growth hormone stimulus","termid":"GO:0071378"}


id: PBO:0028889
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_elongated_multinucleate_cell","termid":"PBO:0028889"}


id: PBO:0049394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein 10","termid":"PBO:0049394"}


id: GO:0048831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of shoot development.","definition_xrefs":["GOC:tb","PMID:16361392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"shoot system development","termid":"GO:0048367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of shoot system development","synonyms":[{"name":"regulation of shoot development","type":"exact"}],"termid":"GO:0048831"}


id: PBO:0043162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell death inducing DFFA like effector b","termid":"PBO:0043162"}


id: GO:0102188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4alpha-methyl-5alpha-cholesta-7,24-dien-3beta-ol + O2 + NADH(2-) + H+ = 4alpha-hydroxymethyl-5alpha-cholesta-7,24-dien-3beta-ol + NAD(1-) + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 4alpha-methyl-5alpha-cholesta-7,24-dien-3beta-ol-4alpha-methyl oxidase activity (obsolete GO:0102188)","termid":"GO:0102188"}


id: FYPO:0004247
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the fungal-type vacuole is normal (i.e. indistinguishable from wild type)..","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal vacuolar morphology during vegetative growth","synonyms":[{"name":"normal vacuolar morphology during mitotic cell cycle","type":"related"},{"name":"normal vacuole morphology during vegetative growth","type":"exact"}],"termid":"FYPO:0004247"}


id: GO:1990420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The septation initiation signaling process by which the activity of the septation initiation network (SIN) is activated asymmetrically on the spindle pole bodies.","definition_xrefs":["PMID:22786806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septation initiation signaling","termid":"GO:0031028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"establishment of septation initiation network asymmetry","synonyms":[{"name":"establishment of SIN asymmetry","type":"exact"}],"termid":"GO:1990420"}


id: GO:0150180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidylserine metabolic process.","definition_xrefs":["PMID:30074985","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatidylserine metabolic process","termid":"GO:0150178"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid metabolic process","termid":"GO:1903726"},{"relation_name":"negatively_regulates","term_name":"phosphatidylserine metabolic process","termid":"GO:0006658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphatidylserine metabolic process","termid":"GO:0150180"}


id: FYPO:0005497
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more CRE elements does not occur.","definition_xrefs":["PomBase:mah","PMID:26108447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished transcription from RNA polymerase II promoter","termid":"FYPO:0003796"},{"relation_name":"is_a","term_name":"decreased transcription from CRE promoter","termid":"FYPO:0005496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000294","FYPO:0001320","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"abolished transcription from CRE promoter","synonyms":[{"name":"abolished transcription from CRE promoter during mitotic cell cycle","type":"related"},{"name":"abolished transcription from CRE promoter during vegetative growth","type":"exact"},{"name":"expression of CRE target genes abolished","type":"related"},{"name":"transcription from CRE promoter abolished","type":"exact"}],"termid":"FYPO:0005497"}


id: GO:1900117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of execution phase of apoptosis.","definition_xrefs":["GOC:mtg_apoptosis","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"execution phase of apoptosis","termid":"GO:0097194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of execution phase of apoptosis","termid":"GO:1900117"}


id: GO:0042600
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protective, noncellular membrane that surrounds the eggs of various animals including insects and fish.","definition_xrefs":["GOC:jl","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure","termid":"GO:0030312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"egg chorion","termid":"GO:0042600"}


id: GO:0061253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mesonephric glomerular parietal epithelial cell. Mesonephric glomerular parietal epithelial cells are specialized epithelial cells that form tight junctions as a barrier to protein transport.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric glomerular epithelial cell differentiation","termid":"GO:0061250"},{"relation_name":"is_a","term_name":"glomerular parietal epithelial cell differentiation","termid":"GO:0072139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular parietal epithelial cell differentiation","termid":"GO:0061253"}


id: PBO:0028385
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_spatial_extent_of_CENP-A_containing_nucleosome_assembly","termid":"PBO:0028385"}


id: PBO:0046831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5 pseudogene 4","termid":"PBO:0046831"}


id: MONDO:0008584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"torus palatinus and torus mandibularis","secondary_identifiers":["MEDGEN:349942","MESH:C566043","UMLS:C1861044","OMIM:189700"],"synonyms":[{"name":"torus palatinus and torus mandibularis","type":"exact"}],"termid":"MONDO:0008584","xrefs":{"Monarch":{"xref_id":"0008584"}}}


id: MONDO:0001828
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-heritable difficulty in distinguishing colors.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color vision disorder","termid":"MONDO:0001703"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acquired color blindness","secondary_identifiers":["UMLS:C0155018","DOID:13912","ICD10CM:H53.52","MEDGEN:57828","NCIT:C118712","ICD9:368.55","SCTID:71676008"],"synonyms":[{"name":"acquired color vision deficiencies","type":"exact"},{"name":"acquired color vision deficiency","type":"exact"},{"name":"acquired color vision disorder","type":"exact"},{"name":"acquired colour vision deficiencies","type":"exact"},{"name":"acquired colour vision deficiency","type":"exact"},{"name":"acquired colour vision disorder","type":"exact"}],"termid":"MONDO:0001828","xrefs":{"Monarch":{"xref_id":"0001828"}}}


id: GO:0002599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antigen processing and presentation of lipid antigen via MHC class Ib.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation via MHC class Ib","termid":"GO:0002593"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0002598"},{"relation_name":"negatively_regulates","term_name":"antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0048003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antigen processing and presentation of lipid antigen via MHC class Ib","synonyms":[{"name":"down regulation of antigen processing and presentation of lipid antigen via MHC class Ib","type":"exact"},{"name":"down-regulation of antigen processing and presentation of lipid antigen via MHC class Ib","type":"exact"},{"name":"downregulation of antigen processing and presentation of lipid antigen via MHC class Ib","type":"exact"},{"name":"inhibition of antigen processing and presentation of lipid antigen via MHC class Ib","type":"narrow"},{"name":"negative regulation of lipid antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0002599"}


id: PBO:0077728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trinucleotide repeat containing 18","termid":"PBO:0077728"}


id: GO:0120183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of disaggregation of a focal adhesion into its constituent components.","definition_xrefs":["PMID:25490267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of focal adhesion disassembly","termid":"GO:0120182"},{"relation_name":"is_a","term_name":"positive regulation of cell-substrate junction organization","termid":"GO:0150117"},{"relation_name":"positively_regulates","term_name":"focal adhesion disassembly","termid":"GO:0120181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of focal adhesion disassembly","termid":"GO:0120183"}


id: MONDO:0100108
data:
  {"annotated_genes":["SJAG_04887"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800341"},{"annotations":[84650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012239"}]},"cv_name":"mondo","definition":"TPM3-related myopathy is a disorder of the musculoskeletal system that covers a wide spectrum of phenotypes and is caused by pathogenic variants in the skeletal muscle γ-Tropomyosin gene. These variants lead to a variety of overlapping adult onset and congenital myopathies characterized by muscle weakness, hypotonia, motor delay, myopathic facies, scoliosis, and sometimes respiratory involvement. Histologic findings on skeletal muscle biopsy are variable with nemaline and intranuclear bodies, cap-like lesions, fiber-type disproportion, and dystrophic features even in patients with the same mutation.","definition_xrefs":["PMID:24692096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of tropomyosin","termid":"MONDO:0017303"},{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"TPM3-related myopathy","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"TPM3 myopathy","type":"exact"},{"name":"TPM3-related myopathy","type":"exact"},{"name":"autosomal dominant TPM3-related myopathy","type":"narrow"},{"name":"congenital myopathy related to TPM3","type":"exact"}],"termid":"MONDO:0100108","terms_by_termid":{"MONDO:0012239":null,"MONDO:0800341":null},"xrefs":{"Monarch":{"xref_id":"0100108"}}}


id: MONDO:0002360
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign well circumscribed neoplasm of hyaline cartilage arising from bone or soft tissue. It is characterized by the presence of chondrocytes.","definition_xrefs":["NCIT:C53459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system benign neoplasm","termid":"MONDO:0000636"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"connective tissue neoplasm","termid":"MONDO:0021581"},{"relation_name":"is_a","term_name":"benign chondrogenic neoplasm","termid":"MONDO:0024470"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroma","secondary_identifiers":["MEDGEN:181701","MESH:D002812","DOID:2602","ICDO:9220/0","UMLS:C0936248"],"synonyms":[{"name":"central chondroma","type":"exact"},{"name":"chondroma","type":"exact"},{"name":"chondroma, benign","type":"exact"}],"termid":"MONDO:0002360","xrefs":{"Monarch":{"xref_id":"0002360"}}}


id: PR:P35669
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutathione synthetase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01184","PANTHER:PTHR11130:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione synthetase large chain (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3F10.04","secondary_identifiers":["UniProtKB:P35669"],"synonyms":[{"name":"GSH synthetase large chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GSH-S (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GSS","type":"exact"},{"name":"glutathione synthase large chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"phytochelatin synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P35669"}


id: PBO:0058317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4690","termid":"PBO:0058317"}


id: PBO:0057454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 573","termid":"PBO:0057454"}


id: PBO:0082287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF family GTPase; component of the COPII vesicle coat; required for transport vesicle formation during ER to Golgi protein transport; lowers membrane rigidity aiding vesicle formation; localizes to ER-mitochondrial contact sites where it enhances membrane curvature, thereby reducing contact size via its N-terminal amphipathic helix; regulates mitochondrial fission and fusion dynamics","termid":"PBO:0082287"}


id: PBO:0028776
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ubiquitinyl_hydrolase_activity","termid":"PBO:0028776"}


id: MOD:01890
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an N-formyl-L-methionine residue and an L-histidine residue to form N-[(L-histidin-1'-yl)methyl]-L-methionine.","definition_xrefs":["PubMed:19622680","RESID:AA0566#FMET"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked L-histidine residue","termid":"MOD:02048"},{"relation_name":"is_a","term_name":"crosslinked N-formyl-L-methionine residue","termid":"MOD:02062"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet)","synonyms":[{"name":"(2S)-2-([(4-[(2S)-2-amino-2-carboxyethyl]-1H-imidazol-1-yl)methyl]amino)-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"N-[(L-histidin-1'-yl)methyl]-L-methionine","type":"exact"}],"termid":"MOD:01890"}


id: PBO:0066523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regucalcin","termid":"PBO:0066523"}


id: PR:O74510
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bqt3 gene.","definition_xrefs":["UniProtKB:O74510","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bouquet formation protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC594.07c","synonyms":[{"name":"Spom972h-bqt3","type":"exact"}],"termid":"PR:O74510"}


id: PR:O94350
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC11E10.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystathionine beta-lyase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC11E10.01","synonyms":[{"name":"CBL (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC11E10.01","type":"exact"},{"name":"beta-cystathionase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"cysteine lyase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94350"}


id: PATO:0000148
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000148 body temperature (obsolete PATO:0000148)","termid":"PATO:0000148"}


id: GO:1902311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of copper ion transmembrane transport.","definition_xrefs":["GOC:TermGenie","PMID:21489137","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metal ion transport","termid":"GO:0010959"},{"relation_name":"is_a","term_name":"regulation of monoatomic cation transmembrane transport","termid":"GO:1904062"},{"relation_name":"regulates","term_name":"copper ion transmembrane transport","termid":"GO:0035434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of copper ion transmembrane transport","synonyms":[{"name":"regulation of copper cation transmembrane transport","type":"exact"},{"name":"regulation of copper ion membrane transport","type":"exact"}],"termid":"GO:1902311"}


id: GO:0089709
data:
  {"annotated_genes":["SJAG_03256","SJAG_03400"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[103335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"}]},"cv_name":"biological_process","definition":"The directed movement of L-histidine across a membrane.","definition_xrefs":["PMID:21307582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"aromatic amino acid transport","termid":"GO:0015801"},{"relation_name":"is_a","term_name":"azole transmembrane transport","termid":"GO:0045117"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03256":null,"SJAG_03400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"L-histidine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0089709","terms_by_termid":{"GO:0089708":null,"GO:0090513":null}}


id: GO:0008297
data:
  {"annotated_genes":["SJAG_05373","SJAG_00377","SJAG_05280","SJAG_01648","SJAG_02908"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88030,100642,106848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008310"},{"annotations":[96621,111080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045145"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 5' or 3' terminus of a single-stranded DNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA exonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016895"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00377":null,"SJAG_01648":null,"SJAG_02908":null,"SJAG_05280":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0016788","GO:0016787","GO:0004527","GO:0003674"],"is_obsolete":false,"name":"single-stranded DNA exodeoxyribonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"single-stranded DNA specific exodeoxyribonuclease activity","type":"related"},{"name":"ssDNA-specific exodeoxyribonuclease activity","type":"related"}],"termid":"GO:0008297","terms_by_termid":{"GO:0008310":null,"GO:0045145":null}}


id: GO:0071189
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the cell adhesion molecules protocadherin-alpha-v7 and protocadherin-gamma-a3, and is involved in the regulation of protein localization to the plasma membrane.","definition_xrefs":["PMID:15347688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protocadherin-alpha-protocadherin-gamma complex","termid":"GO:0071183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protocadherin-alpha-v7-protocadherin-gamma-a3 complex","synonyms":[{"name":"Pcdha7-Pcdhga3 complex","type":"narrow"}],"termid":"GO:0071189"}


id: PBO:0040734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCR activator of RhoGEF and GTPase","termid":"PBO:0040734"}


id: GO:1990070
data:
  {"annotated_genes":["SJAG_01415","SJAG_03467","SJAG_04021","SJAG_02525","SJAG_04618","SJAG_02655","SJAG_04837"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88137,88821,96798,98605,102027,104383,109316],"is_not":false,"summary":null,"term":"GO:1990070"}]},"cv_name":"cellular_component","definition":"A complex that tethers COPII vesicles at ER-Golgi intermediate compartment. Its role in this part of the vesicular transport may start at the ER exit sites. Binds to a component of the COPII coat. In yeast it includes the following subunits: Bet3 (as homodimer), Bet5, Trs20, Trs23, Trs31, Trs33 which are regarded as the core subunits of all TRAPP complexes in yeast.","definition_xrefs":["PMID:22669257","GOC:bhm","PMID:20375281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TRAPP complex","termid":"GO:0030008"},{"relation_name":"part_of","term_name":"endoplasmic reticulum-Golgi intermediate compartment","termid":"GO:0005793"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01415":null,"SJAG_02525":null,"SJAG_02655":null,"SJAG_03467":null,"SJAG_04021":null,"SJAG_04618":null,"SJAG_04837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"TRAPPI protein complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"TRAPP core complex","type":"exact"}],"termid":"GO:1990070","terms_by_termid":{"GO:1990070":null}}


id: GO:1902029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H3-K18 acetylation.","definition_xrefs":["PMID:22110608","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K18 acetylation (obsolete GO:1902029)","synonyms":[{"name":"activation of histone H3 acetylation at K18","type":"exact"},{"name":"activation of histone H3-K18 acetylation","type":"narrow"},{"name":"activation of histone H3K18 acetylation","type":"exact"},{"name":"positive regulation of histone H3 acetylation at K18","type":"exact"},{"name":"positive regulation of histone H3K18 acetylation","type":"exact"},{"name":"up regulation of histone H3 acetylation at K18","type":"exact"},{"name":"up regulation of histone H3-K18 acetylation","type":"exact"},{"name":"up regulation of histone H3K18 acetylation","type":"exact"},{"name":"up-regulation of histone H3 acetylation at K18","type":"exact"},{"name":"up-regulation of histone H3-K18 acetylation","type":"exact"},{"name":"up-regulation of histone H3K18 acetylation","type":"exact"},{"name":"upregulation of histone H3 acetylation at K18","type":"exact"},{"name":"upregulation of histone H3-K18 acetylation","type":"exact"},{"name":"upregulation of histone H3K18 acetylation","type":"exact"}],"termid":"GO:1902029"}


id: FYPO:0004566
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cells show increased sensitivity to caffeine during the second meiotic nuclear division. Cells stop growing (and may die) at a concentration of caffeine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical","termid":"FYPO:0002683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to caffeine during meiosis II","synonyms":[{"name":"hypersensitive to caffeine during meiosis II","type":"exact"},{"name":"sensitive to caffeine during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004566"}


id: PBO:0112563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EST1 family protein, implicated in NMD","termid":"PBO:0112563"}


id: PBO:0111532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 10 like 3","termid":"PBO:0111532"}


id: GO:0014072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an isoquinoline alkaloid stimulus. An isoquinoline alkaloid is any member of a group of compounds with the heterocyclic ring structure of benzo(c)pyridine which is a structure characteristic of the group of opium alkaloids.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkaloid","termid":"GO:0043279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to isoquinoline alkaloid","termid":"GO:0014072"}


id: PBO:0057244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 449a","termid":"PBO:0057244"}


id: PR:Q9UTI7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thymidylate synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11549:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15E1.04","secondary_identifiers":["UniProtKB:Q9UTI7"],"synonyms":[{"name":"Spom972h-TYMS","type":"exact"},{"name":"TS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"TSase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTI7"}


id: FYPO:0007937
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the number of sites of DNA breakpoint junctions is greater than normal during stationary phase.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of DNA breakpoint junctions","termid":"FYPO:0007936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased number of DNA breakpoint junctions during stationary phase","termid":"FYPO:0007937"}


id: MONDO:0800039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any MELAS syndromein which the cause of the disease is a mutation in the MTND5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MELAS syndrome","termid":"MONDO:0010789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"MELAS syndrome caused by mutation in MTND5","synonyms":[{"name":"MTND5 MELAS syndrome","type":"exact"}],"termid":"MONDO:0800039","xrefs":{"Monarch":{"xref_id":"0800039"}}}


id: GO:0090032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroid hormones,compounds with a 1, 2, cyclopentanoperhydrophenanthrene nucleus that act as hormones.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid biosynthetic process","termid":"GO:0010894"},{"relation_name":"is_a","term_name":"negative regulation of hormone biosynthetic process","termid":"GO:0032353"},{"relation_name":"is_a","term_name":"regulation of steroid hormone biosynthetic process","termid":"GO:0090030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of steroid hormone biosynthetic process","termid":"GO:0090032"}


id: GO:0043311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of eosinophil degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte mediated immunity","termid":"GO:0002888"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte degranulation","termid":"GO:0043302"},{"relation_name":"is_a","term_name":"regulation of eosinophil degranulation","termid":"GO:0043309"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"eosinophil degranulation","termid":"GO:0043308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"positive regulation of eosinophil degranulation","synonyms":[{"name":"activation of eosinophil degranulation","type":"narrow"},{"name":"positive regulation of eosinophil granule exocytosis","type":"exact"},{"name":"stimulation of eosinophil degranulation","type":"narrow"},{"name":"up regulation of eosinophil degranulation","type":"exact"},{"name":"up-regulation of eosinophil degranulation","type":"exact"},{"name":"upregulation of eosinophil degranulation","type":"exact"}],"termid":"GO:0043311"}


id: PBO:0079919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase hinge protein pseudogene 4","termid":"PBO:0079919"}


id: PBO:0073340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 2","termid":"PBO:0073340"}


id: MONDO:1011085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in goat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis, non-human animal","termid":"MONDO:1010267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, goat","secondary_identifiers":["OMIA:001033-9925"],"termid":"MONDO:1011085","xrefs":{"Monarch":{"xref_id":"1011085"}}}


id: GO:1905575
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ganglioside GM3.","definition_xrefs":["GOC:TermGenie","PMID:1454804","GO_REF:0000067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"},{"relation_name":"is_a","term_name":"ganglioside binding","termid":"GO:0035594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ganglioside GM3 binding","termid":"GO:1905575"}


id: PBO:0050263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 41","termid":"PBO:0050263"}


id: GO:0035050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the embryonic heart tube over time, from its formation to the mature structure. The heart tube forms as the heart rudiment from the heart field.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"},{"relation_name":"part_of","term_name":"embryonic organ development","termid":"GO:0048568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic heart tube development","termid":"GO:0035050"}


id: GO:0006337
data:
  {"annotated_genes":["SJAG_04038","SJAG_01653","SJAG_02314"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89545,96574,116399],"is_not":false,"summary":null,"term":"GO:0006337"}]},"cv_name":"biological_process","definition":"The controlled breakdown of nucleosomes, the beadlike structural units of eukaryotic chromatin composed of histones and DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex disassembly","termid":"GO:0032986"},{"relation_name":"is_a","term_name":"nucleosome organization","termid":"GO:0034728"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01653":null,"SJAG_02314":null,"SJAG_04038":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0008150","GO:0006325"],"is_obsolete":false,"name":"nucleosome disassembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006337","terms_by_termid":{"GO:0006337":null}}


id: MONDO:0019105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, syndromic renal disease characterized by the entrapment of left renal vein (LRV) between the superior mesenteric artery (SMA) and the abdominal aorta, resulting in increased luminal pressure, renal hilar varices, hematuria and, at the microscopic level, rupture of thin-walled veins into the collecting system in renal fornices.","definition_xrefs":["Orphanet:71273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal nutcracker syndrome","secondary_identifiers":["MESH:D059228","MEDGEN:465238","SCTID:717267005","UMLS:C3178770","EFO:1001838","GARD:11971"],"synonyms":[{"name":"RNS","type":"exact"},{"name":"left renal vein entrapment syndrome","type":"exact"},{"name":"nutcracker syndrome","type":"related"}],"termid":"MONDO:0019105","xrefs":{"Monarch":{"xref_id":"0019105"}}}


id: RO:0002388
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has potential to directly develop into y iff x directly develops into y or x is capable of directly developing into y","direct_ancestors":[{"relation_name":"is_a","term_name":"has_potential_to_develop_into","termid":"RO:0002387"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_potential_to_directly_develop_into","termid":"RO:0002388"}


id: PBO:0090396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT-III adaptor Alx1","termid":"PBO:0090396"}


id: MONDO:0020604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked dominant form of disease.","definition_xrefs":["MONDO:patterns/x_linked"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked dominant disease","secondary_identifiers":["MEDGEN:1798084","DOID:0080009","UMLS:C5566661"],"termid":"MONDO:0020604","xrefs":{"Monarch":{"xref_id":"0020604"}}}


id: GO:1900731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of adenylate cyclase-inhibiting opioid receptor signaling pathway.","definition_xrefs":["GOC:sjw","PMID:17157995","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of adenylate cyclase-inhibiting opioid receptor signaling pathway","termid":"GO:1900729"},{"relation_name":"is_a","term_name":"positive regulation of opioid receptor signaling pathway","termid":"GO:2000476"},{"relation_name":"positively_regulates","term_name":"adenylate cyclase-inhibiting opioid receptor signaling pathway","termid":"GO:0031635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of adenylate cyclase-inhibiting opioid receptor signaling pathway","synonyms":[{"name":"activation of adenylate cyclase-inhibiting opioid receptor signaling pathway","type":"narrow"},{"name":"activation of opioid receptor-mediated adenylate cyclase inhibition","type":"related"},{"name":"up regulation of adenylate cyclase-inhibiting opioid receptor signaling pathway","type":"exact"},{"name":"upregulation of adenylate cyclase-inhibiting opioid receptor signaling pathway","type":"exact"}],"termid":"GO:1900731"}


id: GO:1900094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of transcription from RNA polymerase II promoter that is involved in determination of left/right symmetry.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in determination of left/right symmetry (obsolete GO:1900094)","synonyms":[{"name":"global transcription regulation from Pol II promoter of determination of left/right asymmetry","type":"related"},{"name":"global transcription regulation from Pol II promoter of determination of left/right symmetry","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter of determination of left/right asymmetry","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter of determination of left/right symmetry","type":"related"},{"name":"regulation of global transcription from Pol II promoter of determination of left/right asymmetry","type":"related"},{"name":"regulation of global transcription from Pol II promoter of determination of left/right symmetry","type":"related"},{"name":"regulation of transcription from Pol II promoter of determination of left/right asymmetry","type":"exact"},{"name":"regulation of transcription from Pol II promoter of determination of left/right symmetry","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter of determination of left/right asymmetry","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter of determination of left/right symmetry","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter, global of determination of left/right asymmetry","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global of determination of left/right symmetry","type":"related"}],"termid":"GO:1900094"}


id: MONDO:0008894
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cataract-hypertrichosis-intellectual disability syndrome is characterized by congenital cataract, generalized hypertrichosis and intellectual deficit. It has been described in two Egyptian sibs born to consanguineous parents. It is transmitted as an autosomal recessive trait.","definition_xrefs":["Orphanet:1375"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hypertrichosis","termid":"MONDO:0019280"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cataract-hypertrichosis-intellectual disability syndrome","secondary_identifiers":["SCTID:722379001","UMLS:C0796282","MESH:C537959","GARD:1052","MEDGEN:167117","OMIM:211770"],"synonyms":[{"name":"CAHMR syndrome","type":"exact"},{"name":"cataract, hypertrichosis, intellectual disability syndrome","type":"related"},{"name":"cataract, hypertrichosis, mental retardation syndrome","type":"related"}],"termid":"MONDO:0008894","xrefs":{"Monarch":{"xref_id":"0008894"}}}


id: GO:0060156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reflex that occurs in response to suckling, beginning with a nerve impulse from a receptor in the mammary gland and ending with the ejection of milk from the gland. Signaling never reaches a level of consciousness.","definition_xrefs":["GOC:mr","GOC:st","GOC:dph","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"body fluid secretion","termid":"GO:0007589"},{"relation_name":"is_a","term_name":"secretion by tissue","termid":"GO:0032941"},{"relation_name":"is_a","term_name":"reflex","termid":"GO:0060004"},{"relation_name":"part_of","term_name":"lactation","termid":"GO:0007595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"milk ejection reflex","synonyms":[{"name":"milk ejection","type":"exact"}],"termid":"GO:0060156"}


id: PATO:0001724
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A female receptivity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"female receptivity","termid":"PATO:0001720"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased female receptivity","synonyms":[{"name":"low female receptivity","type":"exact"}],"termid":"PATO:0001724"}


id: PATO:0001673
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Structure quality that is the presence of closed epithelium bounded capsules containing one or more liquid or solid organism substances.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure, cavities","termid":"PATO:0002014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystic","synonyms":[{"name":"cysts","type":"narrow"}],"termid":"PATO:0001673"}


id: MONDO:0100499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple congenital anomalies caused by imprinting defects at 14q32.2 include Kagami-Ogata syndrome and Temple syndrome. Kagami-Ogata syndrome is characterized by typical facial features, skeletal abnormalities (including \\\"coat-hanger ribs\\\", and bell-shaped thorax), abdominal wall defects, and developmental delay, and is caused by defects or absence of maternally derived imprinting signals (including paternal UPD14). Temple syndrome is a less specific phenotype including intrauterine and postnatal growth restriction, hypotonia, feeding difficulties in infancy, truncal obesity, and small feet and hands. Temple syndrome is caused by defects or absence of paternally derived imprinting signals (including maternal UPD14).","definition_xrefs":["PMID:34760887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome","termid":"MONDO:0019042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple congenital anomalies due to 14q32.2 imprinting defect","termid":"MONDO:0100499","xrefs":{"Monarch":{"xref_id":"0100499"}}}


id: MONDO:0015689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, malignant, neoplastic disease characterized by clonal proliferation of myeloid and/or lymphoid precursors harboring rearrangements in the PDGFRA gene, in the blood, bone marrow and often other tissues as well (spleen, lymph nodes, skin, etc.). It usually presents as chronic eosinophilic leukemia or, less commonly, as acute myeloid leukemia or T-lymphoblastic leukemia with eosinophilia. Patients usually present with eosinophilia, anemia, thrombocytopenia, neutrophilia, splenomegaly, lymphadenopathy, fever, sweating and/or weight loss. Tissue infiltration by eosinophils can manifest with skin rash, erythema, cough, neurological alterations, gastrointestinal symptoms or, rarely, endomyocardial fibrosis and restrictive cardiomyopathy.","definition_xrefs":["Orphanet:168947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid/lymphoid neoplasms associated with eosinophilia and abnormality of PDGFRA, PDGFRB, FGFR1 or JAK2","termid":"MONDO:0015688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"myeloid neoplasm associated with PDGFRA rearrangement","secondary_identifiers":["icd11.foundation:833355630","ICDO:9965/3","MEDGEN:1620600","NCIT:C84275","ONCOTREE:MLNPDGFRA","GARD:20106","DOID:0080165","SCTID:738527001","UMLS:C4545381"],"synonyms":[{"name":"myeloid and lymphoid neoplasms associated with PDGFRA rearrangement","type":"exact"},{"name":"myeloid and lymphoid neoplasms with PDGFRA rearrangement","type":"exact"},{"name":"myeloid/lymphoid neoplasm associated with PDGFRA rearrangement","type":"related"},{"name":"myeloid/lymphoid neoplasms with PDGFRA rearrangement","type":"exact"}],"termid":"MONDO:0015689","xrefs":{"Monarch":{"xref_id":"0015689"}}}


id: GO:1904690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cytoplasmic translational initiation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:12242291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translational initiation","termid":"GO:0045948"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational initiation","termid":"GO:1904688"},{"relation_name":"positively_regulates","term_name":"cytoplasmic translational initiation","termid":"GO:0002183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0002181","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of cytoplasmic translational initiation","synonyms":[{"name":"activation of cytoplasmic translational initiation","type":"narrow"},{"name":"up regulation of cytoplasmic translational initiation","type":"exact"},{"name":"up-regulation of cytoplasmic translational initiation","type":"exact"},{"name":"upregulation of cytoplasmic translational initiation","type":"exact"}],"termid":"GO:1904690"}


id: MONDO:0006317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm arising from nerve sheaths. It is characterized by the presence of a myxoid stroma.","definition_xrefs":["NCIT:C7018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nerve sheath neoplasm","termid":"MONDO:0002547"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurothekeoma","secondary_identifiers":["EFO:1000394","MESH:D018321","ICDO:9562/0","MEDGEN:64641","UMLS:C0206730"],"synonyms":[{"name":"nerve sheath Myxoma","type":"exact"},{"name":"neurothekeoma","type":"exact"}],"termid":"MONDO:0006317","xrefs":{"Monarch":{"xref_id":"0006317"}}}


id: PBO:0035903
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_deacetylation_during_vegetative_growth","termid":"PBO:0035903"}


id: GO:0140091
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A muscle cell-specific SWI/SNF-type complex that contains eight to fourteen proteins, including both conserved (core) and nonconserved components; contains the ATPase product of either the SMARCA4/BAF190A/BRG1 gene, the mammalian ortholog of the yeast SNF2 gene, or the SMARCA2/BAF190B/BRM gene, the mammalian ortholog of the Drosophila brm (brahma) gene, or an ortholog of either of these genes, and the muscle-specific product of the DPF3/BAF45C gene or an ortholog thereof.","definition_xrefs":["PMID:11175787","PMID:8804307","GO:bhm","PMID:12620226","PMID:8895581","PMID:15525990"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"mBAF complex","synonyms":[{"name":"muscle-specific BAF complex","type":"exact"},{"name":"muscle-specific SWI/SNF complex","type":"exact"},{"name":"muscle-type BAF complex","type":"exact"},{"name":"muscle-type SWI/SNF complex","type":"exact"}],"termid":"GO:0140091"}


id: PBO:0077785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase II alpha","termid":"PBO:0077785"}


id: PBO:0011185
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression","termid":"PBO:0011185"}


id: MONDO:0042974
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Parainfluenza virus type 3 is one of a group of common viruses known as human parainfluenza viruses (HPIV) that cause a variety of respiratory illnesses. Symptoms usually develop between 2 and 7 days from the time of exposure and typically resolve in 7-10 days. Symptoms may include fever, runny nose, and cough. HPIV-3 can also cause bronchiolitis, bronchitis, and pneumonia. Infants and young children are particularly susceptible to HPIV-3 infections, though older adults and those with a weakened immune system are also at risk for complications. HPIVs are usually spread from an infected person to others through coughing, sneezing, and/or touching. There is currently no vaccine to protect against parainfluenza virus infections. Most HPIV infections resolve on their own and do not require special treatment, though medical intervention may be necessary for severe breathing problems. Most adults have antibodies against parainfluenza but can get repeat infections.","definition_xrefs":["GARD:0004215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respirovirus infectious disease","termid":"MONDO:0005940"},{"relation_name":"is_a","term_name":"parainfluenza infectious disease","termid":"MONDO:0100197"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parainfluenza virus type 3 infectious disease","secondary_identifiers":["GARD:4215","UMLS:C0276324","MEDGEN:547264","ICD9:079.89","SCTID:30270006"],"synonyms":[{"name":"PIV3","type":"related"},{"name":"human parainfluenza virus type 3","type":"related"},{"name":"human respirovirus 3 caused disease or disorder","type":"exact"},{"name":"human respirovirus 3 disease or disorder","type":"exact"},{"name":"human respirovirus 3 infectious disease","type":"exact"},{"name":"infection caused by human parainfluenza virus 3","type":"related"},{"name":"infection caused by parainfluenza virus 3","type":"related"},{"name":"infection due to human parainfluenza virus 3","type":"exact"},{"name":"infection due to parainfluenza virus 3","type":"related"}],"termid":"MONDO:0042974","xrefs":{"Monarch":{"xref_id":"0042974"}}}


id: GO:2000233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of rRNA processing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"negative regulation of RNA metabolic process","termid":"GO:0051253"},{"relation_name":"is_a","term_name":"negative regulation of ribosome biogenesis","termid":"GO:0090071"},{"relation_name":"is_a","term_name":"regulation of rRNA processing","termid":"GO:2000232"},{"relation_name":"negatively_regulates","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0042254"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0042254"},{"rel_name":"negatively_regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0010467","GO:0042254"],"is_obsolete":false,"name":"negative regulation of rRNA processing","synonyms":[{"name":"negative regulation of 35S primary transcript processing","type":"related"}],"termid":"GO:2000233"}


id: GO:0070056
data:
  {"annotated_genes":["SJAG_03536","SJAG_00405","SJAG_04922"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98328,102417,118027],"is_not":false,"summary":null,"term":"GO:0070056"}]},"cv_name":"cellular_component","definition":"The region of the prospore membrane that extends to surround the spore nucleus; coated with specific proteins that are thought to play a role in prospore membrane organization.","definition_xrefs":["GOC:mah","PMID:14702385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"},{"relation_name":"part_of","term_name":"prospore membrane","termid":"GO:0005628"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00405":null,"SJAG_03536":null,"SJAG_04922":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005628"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005628"],"is_obsolete":false,"name":"prospore membrane leading edge","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"forespore membrane leading edge","type":"exact"}],"termid":"GO:0070056","terms_by_termid":{"GO:0070056":null}}


id: GO:1904874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of telomerase RNA localization to Cajal body.","definition_xrefs":["GOC:BHF","GOC:BHF_telomere","GOC:TermGenie","PMID:25467444","GOC:nc","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of telomerase RNA localization to Cajal body","termid":"GO:1904872"},{"relation_name":"positively_regulates","term_name":"telomerase RNA localization to Cajal body","termid":"GO:0090671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of telomerase RNA localization to Cajal body","synonyms":[{"name":"activation of telomerase RNA localization to Cajal body","type":"narrow"},{"name":"up regulation of telomerase RNA localization to Cajal body","type":"exact"},{"name":"up-regulation of telomerase RNA localization to Cajal body","type":"exact"},{"name":"upregulation of telomerase RNA localization to Cajal body","type":"exact"}],"termid":"GO:1904874"}


id: GO:0001771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of an area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and target cell, which facilitates activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction.","definition_xrefs":["GOC:mgi_curators","PMID:11244041","PMID:11376330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell recognition","termid":"GO:0009988"},{"relation_name":"part_of","term_name":"lymphocyte activation","termid":"GO:0046649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immunological synapse formation","synonyms":[{"name":"formation of immunological synapse","type":"exact"}],"termid":"GO:0001771"}


id: PBO:0053732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 951","termid":"PBO:0053732"}


id: GO:0052342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of chitin in the cell wall of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by organism of cell wall chitin in other organism involved in symbiotic interaction (obsolete GO:0052342)","synonyms":[{"name":"catabolism by organism of cell wall chitin in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052342"}


id: PBO:0066564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid domain containing 3","termid":"PBO:0066564"}


id: MONDO:0010647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any azoospermia in which the cause of the disease is a mutation in the TEX11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure, X-linked, 2","secondary_identifiers":["OMIM:309120","MEDGEN:374322","UMLS:C1839841","DOID:0070185","GARD:15302"],"synonyms":[{"name":"Male infertility from defect in meiosis","type":"related"},{"name":"SPGFX2","type":"related"},{"name":"TEX11 azoospermia","type":"exact"},{"name":"azoospermia caused by mutation in TEX11","type":"exact"},{"name":"spermatogenic failure, X-linked, 2","type":"exact"},{"name":"spermatogenic failure, X-linked, 2, X-linked recessive","type":"exact"},{"name":"spermatogenic failure, X-linked, type 2","type":"exact"}],"termid":"MONDO:0010647","xrefs":{"Monarch":{"xref_id":"0010647"}}}


id: FYPO:0004965
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is inviable, is shaped in the form of a pear, and has a larger volume than normal, in the vegetative growth phase of the life cycle. One end is rounded, while the other resembles an end of a normal rod-shaped cell. The normally shaped end has the same diameter as a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable swollen vegetative cell with abnormal cell shape","termid":"FYPO:0002415"},{"relation_name":"is_a","term_name":"inviable pear-shaped vegetative cell","termid":"FYPO:0002904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001985","FYPO:0001320","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"inviable swollen pear-shaped vegetative cell","synonyms":[{"name":"inviable enlarged pear-shaped vegetative cell","type":"related"},{"name":"inviable enlarged volume pear-shaped vegetative cell","type":"exact"},{"name":"inviable large pear-shaped vegetative cell","type":"related"},{"name":"inviable swollen ice cream cone-shaped vegetative cell","type":"exact"},{"name":"inviable swollen pear-shaped cell during vegetative growth","type":"exact"},{"name":"inviable swollen pear-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable, increased pear-shaped vegetative cell size","type":"related"},{"name":"inviable, increased pear-shaped vegetative cell volume","type":"exact"},{"name":"lethal; swollen pear-shaped vegetative cell","type":"exact"}],"termid":"FYPO:0004965"}


id: GO:0071399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a linoleic acid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to linoleic acid","termid":"GO:0070543"},{"relation_name":"is_a","term_name":"cellular response to fatty acid","termid":"GO:0071398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to linoleic acid","synonyms":[{"name":"cellular response to linoleate","type":"exact"}],"termid":"GO:0071399"}


id: MONDO:0003680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chondrosarcoma arising from the surface of bone. It is characterized by a lobulated growth pattern, high mitotic activity, myxoid stroma formation, and necrotic changes. It occurs in adults. Clinical presentation includes pain, and sometimes swelling.","definition_xrefs":["NCIT:C7357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone chondrosarcoma","termid":"MONDO:0000515"},{"relation_name":"is_a","term_name":"bone sarcoma","termid":"MONDO:0021054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"periosteal chondrosarcoma","secondary_identifiers":["MEDGEN:90806","UMLS:C0334549","MONDO:0003683","DOID:5866","DOID:5859","ICDO:9221/3"],"synonyms":[{"name":"chondrosarcoma (disease) of periosteum","type":"exact"},{"name":"juxtacortical chondrosarcoma","type":"exact"},{"name":"juxtacortical chondrosarcoma (morphologic abnormality)","type":"exact"},{"name":"periosteal chondrosarcoma","type":"exact"},{"name":"periosteum chondrosarcoma (disease)","type":"exact"}],"termid":"MONDO:0003680","xrefs":{"Monarch":{"xref_id":"0003680"}}}


id: MONDO:0002508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder involving inflammation of the gums; may affect surrounding and supporting structures of the teeth.","definition_xrefs":["NCIT:C34636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gingival disorder","termid":"MONDO:0002021"},{"relation_name":"is_a","term_name":"stomatitis","termid":"MONDO:0004842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gingivitis","secondary_identifiers":["DOID:3087","MEDGEN:4895","ICD9:523.0","MESH:D005891","ICD9:523.1","ICD9:523.10","UMLS:C0017574","SCTID:66383009"],"synonyms":[{"name":"acute gingivitis","type":"narrow"},{"name":"chronic gingivitis","type":"narrow"},{"name":"gingiva inflammation","type":"exact"},{"name":"gingivitis","type":"exact"},{"name":"inflammation of gingiva","type":"exact"}],"termid":"MONDO:0002508","xrefs":{"Monarch":{"xref_id":"0002508"}}}


id: MONDO:0022938
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness goiter stippled epiphyses","termid":"MONDO:0022938","xrefs":{"Monarch":{"xref_id":"0022938"}}}


id: PBO:0079329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 17A","termid":"PBO:0079329"}


id: PBO:0011055
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_indirect_input","termid":"PBO:0011055"}


id: PBO:0080932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YWHAZ pseudogene 10","termid":"PBO:0080932"}


id: GO:0034079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of butanediol; the biologically relevant isomer is 2,3-butanediol, CH3CH(OH)CH(OH)CH3.","definition_xrefs":["GOC:mah","ISBN:0911910123","MetaCyc:P125-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"butanediol metabolic process","termid":"GO:0034077"},{"relation_name":"is_a","term_name":"glycol biosynthetic process","termid":"GO:0042845"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"butanediol biosynthetic process","synonyms":[{"name":"butanediol anabolism","type":"exact"},{"name":"butanediol biosynthesis","type":"exact"},{"name":"butanediol formation","type":"exact"},{"name":"butanediol synthesis","type":"exact"},{"name":"butylene glycol biosynthesis","type":"exact"},{"name":"butylene glycol biosynthetic process","type":"exact"}],"termid":"GO:0034079"}


id: GO:0046141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of corrin, C19H22N4, the fundamental heterocyclic skeleton of the corrinoids. It consists of four reduced pyrrole rings joined into a macrocyclic ring. Corrin is the core of the vitamin B12 molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corrin metabolic process","termid":"GO:0015009"},{"relation_name":"is_a","term_name":"tetrapyrrole catabolic process","termid":"GO:0033015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"corrin catabolic process","synonyms":[{"name":"corrin breakdown","type":"exact"},{"name":"corrin catabolism","type":"exact"},{"name":"corrin degradation","type":"exact"}],"termid":"GO:0046141"}


id: PBO:0051917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit beta 2","termid":"PBO:0051917"}


id: GO:0021804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the loss of attachments of a cell in the ventricular zone.","definition_xrefs":["GOC:jid","PMID:12626695","GOC:cls","GOC:dph","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell adhesion","termid":"GO:0007162"},{"relation_name":"part_of","term_name":"somal translocation","termid":"GO:0021802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell adhesion in ventricular zone","synonyms":[{"name":"down regulation of cell adhesion in ventricular zone","type":"exact"},{"name":"down-regulation of cell adhesion in ventricular zone","type":"exact"},{"name":"downregulation of cell adhesion in ventricular zone","type":"exact"},{"name":"inhibition of cell adhesion in ventricular zone","type":"narrow"}],"termid":"GO:0021804"}


id: FYPO:0004480
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a calcineurin-dependent response element (CDRE)-containing promoter is decreased during a cellular response to micafungin.","definition_xrefs":["PomBase:mah","PMID:16928959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription from RNA polymerase II promoter during vegetative growth","termid":"FYPO:0005229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000294","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased transcription from CDRE promoter in response to micafungin","synonyms":[{"name":"decreased transcription from CDRE promoter during cellular response to micafungin","type":"exact"},{"name":"decreased transcription from CDRE promoter in response to micafungin during mitotic cell cycle","type":"related"},{"name":"decreased transcription from CDRE promoter in response to micafungin during vegetative growth","type":"exact"},{"name":"reduced transcription from CDRE promoter in response to micafungin","type":"exact"}],"termid":"FYPO:0004480"}


id: PBO:0003953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine aminopeptidase Fma2 (predicted)","termid":"PBO:0003953"}


id: FYPO:0004033
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at tRNA genes is increased.","definition_xrefs":["PomBase:mah","PMID:25392932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin at ncRNA genes","termid":"FYPO:0007011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to chromatin at tRNA genes","synonyms":[{"name":"increased protein localisation to chromatin at tRNA genes","type":"exact"},{"name":"increased protein localization to chromatin at tRNA genes during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at tRNA genes during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin at transfer RNA genes","type":"exact"}],"termid":"FYPO:0004033"}


id: PBO:0047381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 15","termid":"PBO:0047381"}


id: GO:0034150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to toll-like receptor 6.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface toll-like receptor signaling pathway","termid":"GO:0140895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"toll-like receptor 6 signaling pathway","synonyms":[{"name":"TLR6 signaling pathway","type":"exact"},{"name":"toll-like receptor 6 signalling pathway","type":"exact"}],"termid":"GO:0034150"}


id: PBO:0089960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shelterin complex telomere binding subunit Rap1","termid":"PBO:0089960"}


id: PBO:0089465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shelterin complex subunit Pot1","termid":"PBO:0089465"}


id: PBO:0091737
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sre1 and Scp1 form a functional 4:4 oligomer","termid":"PBO:0091737"}


id: PBO:0018076
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human DCP1A","termid":"PBO:0018076"}


id: GO:0008385
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A trimeric protein complex that phosphorylates inhibitory-kappaB (I-kappaB) proteins. The complex is composed of two kinase subunits (alpha and beta) and a regulatory gamma subunit (also called NEMO). In a resting state, NF-kappaB dimers are bound to inhibitory IKB proteins, sequestering NF-kappaB in the cytoplasm. Phosphorylation of I-kappaB targets I-kappaB for ubiquitination and proteasomal degradation, thus releasing the NF-kappaB dimers, which can translocate to the nucleus to bind DNA and regulate transcription.","definition_xrefs":["GOC:bf","PMID:12055104","GOC:ma","PMID:20300203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737","GO:0005829"],"is_obsolete":false,"name":"IkappaB kinase complex","synonyms":[{"name":"IKK complex","type":"exact"},{"name":"heterotrimeric IKK complex","type":"exact"},{"name":"trimeric IKK complex","type":"exact"}],"termid":"GO:0008385"}


id: PBO:0112791
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphate Quality Regulator","termid":"PBO:0112791"}


id: PBO:0040757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B double prime 1 pseudogene","termid":"PBO:0040757"}


id: PR:Q8TFG4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB18E9.04c gene.","definition_xrefs":["UniProtKB:Q8TFG4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB18E9.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB18E9.04c","synonyms":[{"name":"Spom972h-SPAPB18E9.04c","type":"exact"}],"termid":"PR:Q8TFG4"}


id: GO:0102844
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:2-2-16:1-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:2-2-16:2-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:2-2-16:1-monogalactosyldiacylglycerol desaturase activity (SN2-16:2 forming) (obsolete GO:0102844)","termid":"GO:0102844"}


id: GO:0006029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving proteoglycans, any glycoprotein in which the carbohydrate units are glycosaminoglycans.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein metabolic process","termid":"GO:0009100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proteoglycan metabolic process","synonyms":[{"name":"proteoglycan metabolism","type":"exact"},{"name":"proteoglycan sulfate transfer","type":"narrow"}],"termid":"GO:0006029"}


id: GO:0031557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process which directly activates any of the steps required for programmed cell death as a result of a chemical stimulus.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete induction of programmed cell death in response to chemical stimulus (obsolete GO:0031557)","synonyms":[{"name":"induction of programmed cell death in response to chemical stimulus","type":"exact"},{"name":"induction of programmed cell death in response to chemical substance","type":"exact"}],"termid":"GO:0031557"}


id: GO:0060679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a ureteric bud splits into three units at its end.","definition_xrefs":["PMID:16916378","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"part_of","term_name":"branching involved in ureteric bud morphogenesis","termid":"GO:0001658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trifid subdivision of terminal units involved in ureteric bud branching","termid":"GO:0060679"}


id: MONDO:0019198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sympathetic ophthalmia (SO) is a bilateral granulomatous anterior uveitis usually occurring within the three months following trauma or a surgical procedure involving one eye.","definition_xrefs":["Orphanet:79098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"panuveitis","termid":"MONDO:0017255"},{"relation_name":"is_a","term_name":"non-infectious anterior uveitis","termid":"MONDO:0017634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"sympathetic ophthalmia","secondary_identifiers":["MedDRA:10042742","EFO:1001205","ICD9:360.11","SCTID:75315001","DOID:12029","UMLS:C0029077","GARD:18939","MESH:D009879","icd11.foundation:1639718137","MEDGEN:45203"],"synonyms":[{"name":"sympathetic ophthalmia","type":"exact"},{"name":"sympathetic uveitis","type":"exact"}],"termid":"MONDO:0019198","xrefs":{"Monarch":{"xref_id":"0019198"}}}


id: SO:0002123
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A constant (C) gene, a gene that codes the constant region of an immunoglobulin chain.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html","IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin_gene","termid":"SO:0002122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IG_C_gene","synonyms":[{"name":"IGC_gene","type":"exact"},{"name":"Immunoglobulin_Constant_germline_Gene","type":"exact"},{"name":"immunoglobulin_C_gene","type":"exact"}],"termid":"SO:0002123"}


id: PBO:0060224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix remodeling associated 5 Y-linked (pseudogene)","termid":"PBO:0060224"}


id: PR:P87313
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A malignant T cell-amplified sequence 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03852","PRO:DNx","PANTHER:PTHR22798:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation machinery-associated protein 20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.12","secondary_identifiers":["UniProtKB:P87313"],"synonyms":[{"name":"Spom972h-MCTS1","type":"exact"}],"termid":"PR:P87313"}


id: GO:0022404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A multicellular organismal process involved in the periodic casting off and regeneration of an outer covering of cuticle, feathers, hair, horns, skin.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"molting cycle","termid":"GO:0042303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molting cycle process","termid":"GO:0022404"}


id: GO:0050902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The activation of loosely bound or rolling leukocytes by signals displayed on blood vessel endothelial cells, which is typically the second step in cellular extravasation.","definition_xrefs":["ISBN:0781735149","PMID:14708592","PMID:7507411","PMID:8600538","PMID:14680625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte activation","termid":"GO:0045321"},{"relation_name":"part_of","term_name":"cellular extravasation","termid":"GO:0045123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte adhesive activation","synonyms":[{"name":"leukocyte adhesive triggering","type":"exact"}],"termid":"GO:0050902"}


id: PBO:0084152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High affinity nicotinic acid plasma membrane permease; responsible for uptake of low levels of nicotinic acid; expression of the gene increases in the absence of extracellular nicotinic acid or para-aminobenzoate (PABA)","termid":"PBO:0084152"}


id: GO:0036500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the endoplasmic reticulum membrane stress sensor ATF6 (activating transcription factor 6). Begins with activation of ATF6 in response to endoplasmic reticulum (ER) stress, and ends with regulation of a downstream cellular process, e.g. transcription. Under conditions of endoplasmic reticulum stress, ATF6 translocates to the Golgi where it is processed by proteases to release a cytoplasmic domain (ATF6f), which operates as a transcriptional activator of many genes required to restore folding capacity.","definition_xrefs":["PMID:22013210","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER-nucleus signaling pathway","termid":"GO:0006984"},{"relation_name":"is_a","term_name":"endoplasmic reticulum unfolded protein response","termid":"GO:0030968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"ATF6-mediated unfolded protein response","secondary_identifiers":["Reactome:R-HSA-381033"],"synonyms":[{"name":"ATF6 branch of UPR","type":"exact"},{"name":"ATF6 signal transduction pathway","type":"broad"},{"name":"ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"ATF6-alpha UPR branch","type":"narrow"},{"name":"ATF6-beta UPR branch","type":"narrow"},{"name":"UPR signaling by ATF6 stress sensor","type":"exact"},{"name":"activating transcription factor 6 signaling in unfolded protein response","type":"exact"},{"name":"endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"exact"}],"termid":"GO:0036500"}


id: GO:1901348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of secondary cell wall biogenesis.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"positive regulation of cell wall organization or biogenesis","termid":"GO:1903340"},{"relation_name":"is_a","term_name":"regulation of secondary cell wall biogenesis","termid":"GO:2000652"},{"relation_name":"positively_regulates","term_name":"plant-type secondary cell wall biogenesis","termid":"GO:0009834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0071554"},{"rel_name":"regulates","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of secondary cell wall biogenesis","synonyms":[{"name":"activation of cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"activation of plant-type secondary cell wall biogenesis","type":"exact"},{"name":"activation of secondary cell wall anabolism","type":"broad"},{"name":"activation of secondary cell wall biogenesis","type":"narrow"},{"name":"activation of secondary cell wall biosynthetic process","type":"broad"},{"name":"activation of secondary cell wall formation","type":"broad"},{"name":"activation of secondary cell wall synthesis","type":"broad"},{"name":"positive regulation of cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"positive regulation of plant-type secondary cell wall biogenesis","type":"exact"},{"name":"positive regulation of secondary cell wall anabolism","type":"broad"},{"name":"positive regulation of secondary cell wall biosynthetic process","type":"broad"},{"name":"positive regulation of secondary cell wall formation","type":"broad"},{"name":"positive regulation of secondary cell wall synthesis","type":"broad"},{"name":"up regulation of cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"up regulation of plant-type secondary cell wall biogenesis","type":"exact"},{"name":"up regulation of secondary cell wall anabolism","type":"broad"},{"name":"up regulation of secondary cell wall biogenesis","type":"exact"},{"name":"up regulation of secondary cell wall biosynthetic process","type":"broad"},{"name":"up regulation of secondary cell wall formation","type":"broad"},{"name":"up regulation of secondary cell wall synthesis","type":"broad"},{"name":"up-regulation of cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"up-regulation of plant-type secondary cell wall biogenesis","type":"exact"},{"name":"up-regulation of secondary cell wall anabolism","type":"broad"},{"name":"up-regulation of secondary cell wall biogenesis","type":"exact"},{"name":"up-regulation of secondary cell wall biosynthetic process","type":"broad"},{"name":"up-regulation of secondary cell wall formation","type":"broad"},{"name":"up-regulation of secondary cell wall synthesis","type":"broad"},{"name":"upregulation of cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"upregulation of plant-type secondary cell wall biogenesis","type":"exact"},{"name":"upregulation of secondary cell wall anabolism","type":"broad"},{"name":"upregulation of secondary cell wall biogenesis","type":"exact"},{"name":"upregulation of secondary cell wall biosynthetic process","type":"broad"},{"name":"upregulation of secondary cell wall formation","type":"broad"},{"name":"upregulation of secondary cell wall synthesis","type":"broad"}],"termid":"GO:1901348"}


id: FYPO:0007541
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, branched, has more than one nucleus and more than one septum, and has a larger volume and is longer, than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multinucleate multiseptate vegetative cell","termid":"FYPO:0001252"},{"relation_name":"is_a","term_name":"viable branched, elongated, multiseptate vegetative cell","termid":"FYPO:0003500"},{"relation_name":"is_a","term_name":"viable branched, swollen, elongated, multinucleate vegetative cell","termid":"FYPO:0006167"},{"relation_name":"is_a","term_name":"swollen elongated multiseptate vegetative cell","termid":"FYPO:0007436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005","FYPO:0000004","FYPO:0000631","FYPO:0001320","FYPO:0000032","FYPO:0005447"],"is_obsolete":false,"name":"viable branched, swollen, elongated, multinucleate, multiseptate vegetative cell","synonyms":[{"name":"viable branched, elongated, swollen, multinucleate, multiseptate vegetative cell","type":"exact"},{"name":"viable branched, swollen, elongated, multinucleate, multiseptate cell during vegetative growth","type":"exact"},{"name":"viable branched, swollen, elongated, multinucleate, multiseptate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007541"}


id: PBO:0062327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 65","termid":"PBO:0062327"}


id: GO:0090149
data:
  {"annotated_genes":["SJAG_03464","SJAG_02848","SJAG_05261"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94453,102008,102265],"is_not":false,"summary":null,"term":"GO:0090149"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the separation of a single continuous mitochondrial membrane into two membranes and contributes to mitochondrial fission.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane fission","termid":"GO:0090148"},{"relation_name":"part_of","term_name":"mitochondrial fission","termid":"GO:0000266"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02848":null,"SJAG_03464":null,"SJAG_05261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0007005"],"is_obsolete":false,"name":"mitochondrial membrane fission","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"membrane fission involved in mitochondrial fission","type":"exact"},{"name":"mitochondrial membrane scission","type":"exact"}],"termid":"GO:0090149","terms_by_termid":{"GO:0090149":null}}


id: SO:0000794
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A rescue region that is engineered.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"is_a","term_name":"rescue_region","termid":"SO:0000411"},{"relation_name":"is_a","term_name":"engineered_region","termid":"SO:0000804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_rescue_region","synonyms":[{"name":"engineered rescue fragment","type":"exact"},{"name":"engineered rescue region","type":"exact"},{"name":"engineered rescue segment","type":"exact"}],"termid":"SO:0000794"}


id: PBO:0068372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF157 antisense RNA 1","termid":"PBO:0068372"}


id: PBO:0075110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 159","termid":"PBO:0075110"}


id: FYPO:0003759
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell of normal morphology that undergoes one or two rounds of cell division, and all cells produced arrest the cell cycle with a single nucleus and then die.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"is_a","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"is_a","term_name":"inviable after spore germination, single or double cell division","termid":"FYPO:0001042"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, cell cycle arrest","termid":"FYPO:0001924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, single or double cell division, arrest with single nucleus","synonyms":[{"name":"inviable following spore germination, single or double cell division, arrest with single nucleus","type":"exact"},{"name":"inviable germinated spore, single or double cell division, arrest with single nucleus","type":"exact"},{"name":"lethal after spore germination, single or double cell division, arrest with single nucleus","type":"exact"}],"termid":"FYPO:0003759"}


