# terms

id: PBO:0064773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase like 4","termid":"PBO:0064773"}


id: GO:0102684
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-phenylalanine + 2 NADPH + 2 O2 + 2 H+ = (E)-phenylacetaldehyde oxime + 2 NADP + 3 H2O + carbon dioxide.","definition_xrefs":["EC:1.14.14.40","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"L-phenylalanine N-monooxygenase activity","secondary_identifiers":["MetaCyc:RXN-4602","RHEA:33263"],"termid":"GO:0102684"}


id: GO:1903228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of xanthosine.","definition_xrefs":["GO_REF:0000068","GOC:TermGenie","PMID:7007809","PMID:7559336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleoside catabolic process","termid":"GO:0046130"},{"relation_name":"is_a","term_name":"xanthosine metabolic process","termid":"GO:1903227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"xanthosine catabolic process","synonyms":[{"name":"xanthosine breakdown","type":"exact"},{"name":"xanthosine catabolism","type":"exact"},{"name":"xanthosine degradation","type":"exact"}],"termid":"GO:1903228"}


id: PBO:0034060
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-phosphorylates","termid":"PBO:0034060"}


id: GO:0008882
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + [L-glutamate:ammonia ligase (ADP-forming)] = diphosphate + adenylyl-[L-glutamate:ammonia ligase (ADP-forming)].","definition_xrefs":["EC:2.7.7.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016779"],"is_obsolete":false,"name":"[glutamate-ammonia-ligase] adenylyltransferase activity","secondary_identifiers":["MetaCyc:GSADENYLATION-RXN","RHEA:18589"],"synonyms":[{"name":"ATP:L-glutamate:ammonia ligase (ADP-forming) adenylyltransferase activity","type":"related"},{"name":"ATP:[glutamate-ammonia-ligase] adenylyltransferase activity","type":"exact"},{"name":"ATP:glutamine synthetase adenylyltransferase activity","type":"related"},{"name":"adenosine triphosphate:glutamine synthetase adenylyltransferase activity","type":"related"},{"name":"glutamate-ammonia-ligase adenylyltransferase activity","type":"exact"},{"name":"glutamine-synthetase adenylyltransferase activity","type":"related"}],"termid":"GO:0008882"}


id: GO:0050955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a temperature stimulus, convert it to a molecular signal, and recognize and characterize the signal. Thermoception in larger animals is mainly done in the skin; mammals have at least two types of sensor, for detecting heat (temperatures above body temperature) and cold (temperatures below body temperature).","definition_xrefs":["Wikipedia:Thermoception","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of temperature stimulus","termid":"GO:0050951"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thermoception","synonyms":[{"name":"thermoreception","type":"exact"}],"termid":"GO:0050955"}


id: GO:0150017
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any dendrite in a dendritic tree that emerges near the basal pole of a neuron (e.g. in bipolar neurons, basal dendrites are either on the same side of the soma as the axon, or project toward the axon), and which is the closest to the cell body of the neuron (the soma).","definition_xrefs":["GOC:bc","GOC:aruk","PMID:16899232","PMID:17046728","PMID:1720142","PMID:22683681","PMID:9214543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basal dendrite","termid":"GO:0097441"},{"relation_name":"is_a","term_name":"proximal dendrite","termid":"GO:1990635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basal proximal dendrite","termid":"GO:0150017"}


id: GO:1900568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of chanoclavine-I aldehyde.","definition_xrefs":["GOC:TermGenie","GOC:di"],"gene_count":0,"genotype_count":0,"name":"obsolete chanoclavine-I aldehyde catabolic process (obsolete GO:1900568)","synonyms":[{"name":"chanoclavine-I aldehyde breakdown","type":"exact"},{"name":"chanoclavine-I aldehyde catabolism","type":"exact"},{"name":"chanoclavine-I aldehyde degradation","type":"exact"}],"termid":"GO:1900568"}


id: PBO:0074617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 17B","termid":"PBO:0074617"}


id: GO:0030569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stops, prevents or reduces the activity of the serine endopeptidase chymotrypsin.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete chymotrypsin inhibitor activity (obsolete GO:0030569)","synonyms":[{"name":"chymotrypsin inhibitor activity","type":"exact"}],"termid":"GO:0030569"}


id: PBO:0003617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TatD homolog (predicted)","termid":"PBO:0003617"}


id: PBO:0056770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 21C, AARS1 lysine","termid":"PBO:0056770"}


id: PBO:0080591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 18","termid":"PBO:0080591"}


id: PBO:0017979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folliculin/Birt-Hogg-Dube syndrome ortholog Bhd1","termid":"PBO:0017979"}


id: GO:0005006
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an epidermal growth factor receptor ligand and transmitting the signal across the plasma membrane to initiate a change in cell activity.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein tyrosine kinase activity","termid":"GO:0004714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0140096","GO:0004672","GO:0016301","GO:0003674","GO:0038023"],"is_obsolete":false,"name":"epidermal growth factor receptor activity","secondary_identifiers":["GO:0005023"],"synonyms":[{"name":"EGF receptor activity","type":"exact"},{"name":"EGFR","type":"exact"},{"name":"TGF-alpha receptor activity","type":"exact"},{"name":"epidermal growth factor-activated receptor activity","type":"exact"},{"name":"transforming growth factor-alpha receptor activity","type":"exact"}],"termid":"GO:0005006"}


id: SO:0001392
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified threonine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_threonine","secondary_identifiers":["MOD:00917"],"synonyms":[{"name":"ModThr","type":"exact"},{"name":"modified L threonine","type":"exact"},{"name":"modified L-threonine","type":"exact"}],"termid":"SO:0001392"}


id: PBO:0045431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPY19L1 pseudogene 2","termid":"PBO:0045431"}


id: MONDO:0024491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic qualifier indicating that a cancerous lesion is well differentiated.","definition_xrefs":["NCIT:C28077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor grade 1 or 2, general grading system","termid":"MONDO:0024495"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor grade 1, general grading system","secondary_identifiers":["UMLS:C0475269","MEDGEN:634565"],"synonyms":[{"name":"G1","type":"exact"},{"name":"grade 1","type":"exact"},{"name":"grade I","type":"exact"},{"name":"low grade","type":"exact"},{"name":"well differentiated","type":"exact"}],"termid":"MONDO:0024491","xrefs":{"Monarch":{"xref_id":"0024491"}}}


id: PBO:0029177
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_peptide-serine-N-acetyltransferase_activity","termid":"PBO:0029177"}


id: PBO:0046787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer of zeste 2 polycomb repressive complex 2 subunit","termid":"PBO:0046787"}


id: SO:1000087
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence_variation that causes an increase in the level of mature, spliced and processed RNA, resulting from a change in the corresponding DNA sequence.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000087 sequence_variation_increasing_level_of_transcript (obsolete SO:1000087)","synonyms":[{"name":"mutation increasing level of transcript","type":"exact"},{"name":"sequence variation increasing level of transcript","type":"exact"}],"termid":"SO:1000087"}


id: GO:0035144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the anal fin are generated and organized. An anal fin is an unpaired medial fin on the ventral aspect near the caudal end of a fish, which provides lateral stability while swimming.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medial fin morphogenesis","termid":"GO:0035141"},{"relation_name":"part_of","term_name":"anal fin development","termid":"GO:0033335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anal fin morphogenesis","termid":"GO:0035144"}


id: PBO:0038339
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_substance_added","termid":"PBO:0038339"}


id: MONDO:0044685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"autoimmune/inflammatory optic neuropathy","secondary_identifiers":["UMLS:C5681239","GARD:22037","Orphanet:499047","MEDGEN:1842963"],"termid":"MONDO:0044685","xrefs":{"Monarch":{"xref_id":"0044685"}}}


id: PBO:0058676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6804","termid":"PBO:0058676"}


id: GO:1900896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of heptadecane biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heptadecane metabolic process","termid":"GO:1900899"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"heptadecane biosynthetic process","termid":"GO:1900636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heptadecane biosynthetic process","synonyms":[{"name":"regulation of heptadecane anabolism","type":"exact"},{"name":"regulation of heptadecane biosynthesis","type":"exact"},{"name":"regulation of heptadecane formation","type":"exact"},{"name":"regulation of heptadecane synthesis","type":"exact"}],"termid":"GO:1900896"}


id: GO:0003407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the neural retina over time from its initial formation to the mature structure. The neural retina is the part of the retina that contains neurons and photoreceptor cells.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"retina development in camera-type eye","termid":"GO:0060041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural retina development","termid":"GO:0003407"}


id: PBO:0056655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 22","termid":"PBO:0056655"}


id: SO:0001522
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"When a translocation is simply moving genetic material from one chromosome to another.","direct_ancestors":[{"relation_name":"is_a","term_name":"translocaton_attribute","termid":"SO:0001520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insertional","termid":"SO:0001522"}


id: PBO:0001562
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.1.30","termid":"PBO:0001562"}


id: PBO:0061792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outer dynein arm docking complex subunit 3","termid":"PBO:0061792"}


id: GO:0035007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that affects the rate, extent or location of the melanization defense response during injury or invasion.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolic process","termid":"GO:0043455"},{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"regulates","term_name":"melanization defense response","termid":"GO:0035006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of melanization defense response","synonyms":[{"name":"regulation of melanization defence response","type":"exact"}],"termid":"GO:0035007"}


id: MOD:02043
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-aspartic acid residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-aspartic acid residue","synonyms":[{"name":"XlnkAsp","type":"exact"}],"termid":"MOD:02043"}


id: GO:1901859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitochondrial DNA metabolic process.","definition_xrefs":["GOC:yaf","GOC:TermGenie","PMID:23150719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"},{"relation_name":"is_a","term_name":"regulation of mitochondrial DNA metabolic process","termid":"GO:1901858"},{"relation_name":"negatively_regulates","term_name":"mitochondrial DNA metabolic process","termid":"GO:0032042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitochondrial DNA metabolic process","synonyms":[{"name":"down regulation of mitochondrial DNA metabolic process","type":"exact"},{"name":"down regulation of mitochondrial DNA metabolism","type":"exact"},{"name":"down regulation of mtDNA metabolic process","type":"exact"},{"name":"down regulation of mtDNA metabolism","type":"exact"},{"name":"down-regulation of mitochondrial DNA metabolic process","type":"exact"},{"name":"down-regulation of mitochondrial DNA metabolism","type":"exact"},{"name":"down-regulation of mtDNA metabolic process","type":"exact"},{"name":"down-regulation of mtDNA metabolism","type":"exact"},{"name":"downregulation of mitochondrial DNA metabolic process","type":"exact"},{"name":"downregulation of mitochondrial DNA metabolism","type":"exact"},{"name":"downregulation of mtDNA metabolic process","type":"exact"},{"name":"downregulation of mtDNA metabolism","type":"exact"},{"name":"inhibition of mitochondrial DNA metabolic process","type":"narrow"},{"name":"inhibition of mitochondrial DNA metabolism","type":"exact"},{"name":"inhibition of mtDNA metabolic process","type":"exact"},{"name":"inhibition of mtDNA metabolism","type":"exact"},{"name":"negative regulation of mitochondrial DNA metabolism","type":"exact"},{"name":"negative regulation of mtDNA metabolic process","type":"exact"},{"name":"negative regulation of mtDNA metabolism","type":"exact"}],"termid":"GO:1901859"}


id: GO:0048252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lauric acid, a fatty acid with the formula CH3(CH2)10COOH. Derived from vegetable sources.","definition_xrefs":["GOC:jid","PMID:15555597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medium-chain fatty acid metabolic process","termid":"GO:0051791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"lauric acid metabolic process","synonyms":[{"name":"lauric acid metabolism","type":"exact"},{"name":"n-dodecanoic acid metabolic process","type":"exact"},{"name":"n-dodecanoic acid metabolism","type":"exact"}],"termid":"GO:0048252"}


id: PR:000027564
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A-alpha phosphorylated 1 in Schizosaccharomyces pombe. Phosphorylation motif is SQE. Example: UniProtKB:P04909-1, Ser-129, MOD:00046.","definition_xrefs":["PomBase:MAH","PMID:21516229","PMID:15226425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A-alpha (Schizosaccharomyces pombe 972h-)","termid":"PR:P04909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hta1/Phos(S128)","pombase_gene_id":"SPCC622.08c","synonyms":[{"name":"PomBase_original_PRO_term_name: histone H2A-alpha phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hta1/Phos:1","type":"exact"},{"name":"gamma-H2A (Schizosaccharomyces pombe)","type":"related"},{"name":"histone H2A.1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"hta1/Phos(S128)","type":"exact"},{"name":"hta1/Phos:(S129)","type":"exact"}],"termid":"PR:000027564"}


id: PBO:0083059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrofolate synthetase, involved in folic acid biosynthesis; catalyzes conversion of dihydropteroate to dihydrofolate in folate coenzyme biosynthesis; FOL3 has a paralog, RMA1, that arose from the whole genome duplication","termid":"PBO:0083059"}


id: PBO:0040730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-carotene oxygenase 2","termid":"PBO:0040730"}


id: PBO:0073773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 4 member 7","termid":"PBO:0073773"}


id: GO:0030394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving fructoseglycine, a fructose molecule containing a glycine group in place of a hydroxyl group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"fructosamine metabolic process","termid":"GO:0030389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"fructoseglycine metabolic process","synonyms":[{"name":"fructoseglycine metabolism","type":"exact"}],"termid":"GO:0030394"}


id: PBO:0071191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 32","termid":"PBO:0071191"}


id: MONDO:0009509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Landau-Kleffner syndrome (LKS) is a rare neurological syndrome characterized by the sudden or gradual development of aphasia (the inability to understand or express language) and recurrent seizures (epilepsy). Children with LKS typically develop normally until signs and symptoms of the syndrome begin to develop between age 2 and 8 years. Males are more often affected by LKS than females. In about 20% of people with LKS, mutations (changes) in the GRIN2A gene have been identified. The syndrome is inherited in an autosomal dominant manner. In other cases, the syndrome may be caused by changes to other unidentified genes. LKS is diagnosed when a doctor sees clinical features that are consistent with the syndrome such as a loss of speech and an electroencephalogram (EEG) that shows specific kinds of seizure activity. Genetic testing can be used to confirm if there is a mutation in GRIN2A, but this testing is not done routinely. Treatment for LKS usually consists of medications such as anticonvulsants and corticosteroids to help prevent seizures. Speech therapy should also be started promptly in order to ensure the best long-term outlook for children with LKS.","direct_ancestors":[{"relation_name":"is_a","term_name":"childhood electroclinical syndrome","termid":"MONDO:0000414"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"childhood-onset epilepsy syndrome","termid":"MONDO:0020072"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"Landau-Kleffner syndrome","secondary_identifiers":["Orphanet:98818","NCIT:C84806","DOID:2538","EFO:1001010","UMLS:C0282512","icd11.foundation:348544271","GARD:6855","MedDRA:10052075","MESH:D018887","OMIM:245570","SCTID:230438007","MedDRA:10052083","MEDGEN:79465","NANDO:1200602"],"synonyms":[{"name":"FESD","type":"related"},{"name":"LKS","type":"exact"},{"name":"Landau-Kleffner syndrome","type":"exact"},{"name":"Rolandic epilepsy, intellectual disability, and speech dyspraxia, autosomal dominant","type":"related"},{"name":"Rolandic epilepsy, mental retardation, and speech dyspraxia, autosomal dominant","type":"related"},{"name":"acquired aphasia with convulsive disorder","type":"related"},{"name":"acquired epileptic aphasia","type":"exact"},{"name":"acquired epileptiform aphasia","type":"related"},{"name":"aphasia, acquired, with epilepsy","type":"related"},{"name":"benign epilepsy of childhood with centrotemporal spikes","type":"related"},{"name":"continuous Spike and waves during slow-Wave sleep syndrome","type":"related"},{"name":"epilepsy, focal, with speech disorder and with or without impaired intellectual development","type":"exact"},{"name":"epilepsy, focal, with speech disorder and with or without intellectual disability","type":"related"},{"name":"epilepsy, focal, with speech disorder and with or without mental retardation","type":"related"}],"termid":"MONDO:0009509","xrefs":{"Monarch":{"xref_id":"0009509"}}}


id: PBO:0061813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 3 Y-linked","termid":"PBO:0061813"}


id: FYPO:0007384
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin along the length of genes that can be transcribed by RNA polymerase II is normal (i.e. indistinguishable from wild type) during a cellular response to oxidative stress.","definition_xrefs":["PomBase:mah","PMID:28652406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein distribution along RNA polymerase II-transcribed genes","termid":"FYPO:0006021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal protein distribution along RNA polymerase II-transcribed genes during cellular response to oxidative stress","synonyms":[{"name":"normal protein distribution across RNA polymerase II-transcribed genes during cellular response to oxidative stress","type":"exact"},{"name":"normal protein distribution along RNA polymerase II-regulated genes during cellular response to oxidative stress","type":"exact"},{"name":"normal protein distribution along RNA polymerase II-transcribed genes during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"normal protein distribution along RNA polymerase II-transcribed genes during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"normal protein distribution in chromatin along RNA polymerase II-transcribed genes during cellular response to oxidative stress","type":"exact"},{"name":"normal protein localization to chromatin along RNA polymerase II-transcribed genes during cellular response to oxidative stress","type":"exact"}],"termid":"FYPO:0007384"}


id: GO:0032744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-20 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-20 production","termid":"GO:0032664"},{"relation_name":"positively_regulates","term_name":"interleukin-20 production","termid":"GO:0032624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-20 production","secondary_identifiers":["GO:0045389"],"synonyms":[{"name":"activation of interleukin-20 production","type":"narrow"},{"name":"positive regulation of IL-20 production","type":"exact"},{"name":"positive regulation of interleukin-20 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-20 production","type":"narrow"},{"name":"up regulation of interleukin-20 production","type":"exact"},{"name":"up-regulation of interleukin-20 production","type":"exact"},{"name":"upregulation of interleukin-20 production","type":"exact"}],"termid":"GO:0032744"}


id: PBO:0062338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily D member 1 pseudogene","termid":"PBO:0062338"}


id: GO:0030812
data:
  {"annotated_genes":["SJAG_00685","SJAG_05314"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72581,75550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of nucleotides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"regulation of nucleotide catabolic process","termid":"GO:0030811"},{"relation_name":"is_a","term_name":"negative regulation of nucleotide metabolic process","termid":"GO:0045980"},{"relation_name":"negatively_regulates","term_name":"nucleotide catabolic process","termid":"GO:0009166"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of nucleotide catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"down regulation of nucleotide catabolic process","type":"exact"},{"name":"down-regulation of nucleotide catabolic process","type":"exact"},{"name":"downregulation of nucleotide catabolic process","type":"exact"},{"name":"inhibition of nucleotide catabolic process","type":"narrow"},{"name":"negative regulation of nucleotide breakdown","type":"exact"},{"name":"negative regulation of nucleotide catabolism","type":"exact"},{"name":"negative regulation of nucleotide degradation","type":"exact"}],"termid":"GO:0030812","terms_by_termid":{"GO:0045820":null}}


id: GO:0003930
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate.","definition_xrefs":["EC:3.6.1.47"],"gene_count":0,"genotype_count":0,"name":"obsolete RAS small monomeric GTPase activity (obsolete GO:0003930)","synonyms":[{"name":"RAS small monomeric GTPase activity","type":"exact"}],"termid":"GO:0003930"}


id: GO:1900687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of gerfelin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of gerfelin biosynthetic process","termid":"GO:1900686"},{"relation_name":"negatively_regulates","term_name":"gerfelin biosynthetic process","termid":"GO:1900578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"negative regulation of gerfelin biosynthetic process","synonyms":[{"name":"down regulation of gerfelin anabolism","type":"exact"},{"name":"down regulation of gerfelin biosynthesis","type":"exact"},{"name":"down regulation of gerfelin biosynthetic process","type":"exact"},{"name":"down regulation of gerfelin formation","type":"exact"},{"name":"down regulation of gerfelin synthesis","type":"exact"},{"name":"down-regulation of gerfelin anabolism","type":"exact"},{"name":"down-regulation of gerfelin biosynthesis","type":"exact"},{"name":"down-regulation of gerfelin biosynthetic process","type":"exact"},{"name":"down-regulation of gerfelin formation","type":"exact"},{"name":"down-regulation of gerfelin synthesis","type":"exact"},{"name":"downregulation of gerfelin anabolism","type":"exact"},{"name":"downregulation of gerfelin biosynthesis","type":"exact"},{"name":"downregulation of gerfelin biosynthetic process","type":"exact"},{"name":"downregulation of gerfelin formation","type":"exact"},{"name":"downregulation of gerfelin synthesis","type":"exact"},{"name":"inhibition of gerfelin anabolism","type":"exact"},{"name":"inhibition of gerfelin biosynthesis","type":"exact"},{"name":"inhibition of gerfelin biosynthetic process","type":"narrow"},{"name":"inhibition of gerfelin formation","type":"exact"},{"name":"inhibition of gerfelin synthesis","type":"exact"},{"name":"negative regulation of gerfelin anabolism","type":"exact"},{"name":"negative regulation of gerfelin biosynthesis","type":"exact"},{"name":"negative regulation of gerfelin formation","type":"exact"},{"name":"negative regulation of gerfelin synthesis","type":"exact"}],"termid":"GO:1900687"}


id: GO:0031660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cyclin-dependent protein serine/threonine kinase activity contributing to the G2/M transition of the cell cycle.","definition_xrefs":["GOC:pr","GOC:tb","GOC:dph","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cyclin-dependent protein serine/threonine kinase activity involved in G2/M transition of mitotic cell cycle (obsolete GO:0031660)","synonyms":[{"name":"G2/M-specific regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"regulation of cyclin-dependent protein kinase activity during G2/M","type":"related"},{"name":"regulation of cyclin-dependent protein kinase activity involved in G2/M","type":"broad"}],"termid":"GO:0031660"}


id: PBO:0064267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and RhoGEF domain containing G1","termid":"PBO:0064267"}


id: PBO:0111883
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMT2 subfamily","termid":"PBO:0111883"}


id: PR:Q02592
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-binding cassette sub-family B member 6, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04872","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heavy metal tolerance protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC737.09c","secondary_identifiers":["UniProtKB:Q02592"],"synonyms":[{"name":"Spom972h-ABCB6","type":"exact"}],"termid":"PR:Q02592"}


id: PBO:0054910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2324","termid":"PBO:0054910"}


id: GO:0021887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a hypothalamus neuron that releases gonadotrophin-releasing hormone.","definition_xrefs":["GO_REF:0000021","GOC:cls","PMID:12626695","GOC:jid","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"hypothalamus gonadotrophin-releasing hormone neuron differentiation","termid":"GO:0021886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypothalamus gonadotrophin-releasing hormone neuron fate commitment","synonyms":[{"name":"hypothalamus gonadotropin-releasing hormone neuron fate commitment","type":"related"}],"termid":"GO:0021887"}


id: PBO:0109092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 10","termid":"PBO:0109092"}


id: MONDO:0009749
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Giant axonal neuropathy (GAN) is a degenerative disorder that is characterized by a progressive motor and sensitive peripheral and central nervous system neuropathy.","definition_xrefs":["Orphanet:643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"giant axonal neuropathy","termid":"MONDO:0000128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"giant axonal neuropathy 1","secondary_identifiers":["GARD:6500","DOID:0090068","MEDGEN:376775","OMIM:256850","UMLS:C1850386"],"synonyms":[{"name":"GAN","type":"exact"},{"name":"GAN giant axonal neuropathy","type":"exact"},{"name":"GAN1","type":"related"},{"name":"gan","type":"exact"},{"name":"gan giant axonal neuropathy","type":"exact"},{"name":"giant axonal neuropathy 1","type":"exact"},{"name":"giant axonal neuropathy 1, autosomal recessive","type":"related"},{"name":"giant axonal neuropathy caused by mutation in GAN","type":"exact"},{"name":"giant axonal neuropathy caused by mutation in gan","type":"exact"},{"name":"giant axonal neuropathy type 1","type":"exact"},{"name":"giant axonal neuropathy-1","type":"exact"},{"name":"neuropathy, giant axonal","type":"related"}],"termid":"MONDO:0009749","xrefs":{"Monarch":{"xref_id":"0009749"}}}


id: PBO:0034755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ING family histone acetyltransferase complex PHD-type zinc finger subunit Png2","termid":"PBO:0034755"}


id: MONDO:0013879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary fibrosis and/or bone marrow failure, telomere-related","termid":"MONDO:0000148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, 2","secondary_identifiers":["OMIM:614743","MEDGEN:766536","UMLS:C3553622"],"synonyms":[{"name":"PFBMFT2","type":"related"},{"name":"aplastic anaemia","type":"broad"},{"name":"aplastic anemia","type":"broad"},{"name":"pulmonary fibrosis and/or bone marrow failure, TELOMERE-RELATED, 2","type":"related"},{"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, 2","type":"exact"},{"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, type 2","type":"exact"},{"name":"pulmonary fibrosis, idiopathic, susceptibility to","type":"related"}],"termid":"MONDO:0013879","xrefs":{"Monarch":{"xref_id":"0013879"}}}


id: PBO:0041190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BUB1 mitotic checkpoint serine/threonine kinase","termid":"PBO:0041190"}


id: PBO:0026858
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_anaphase-promoting_complex_assembly","termid":"PBO:0026858"}


id: MONDO:0008705
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease","termid":"MONDO:0002561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561"],"is_obsolete":false,"name":"lysosomal acid phosphatase deficiency","secondary_identifiers":["MESH:C562645","ICD10CM:E83.3","UMLS:C0268410","SCTID:57863006","GARD:16636","ICD9:277.6","MEDGEN:78674","Orphanet:35121","OMIM:200950"],"synonyms":[{"name":"acid phosphatase deficiency","type":"exact"},{"name":"lysosomal acid phosphatase deficiency","type":"exact"}],"termid":"MONDO:0008705","xrefs":{"Monarch":{"xref_id":"0008705"}}}


id: GO:0008756
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-succinylbenzoate + ATP + CoA = 2-succinylbenzoyl-CoA + AMP + diphosphate.","definition_xrefs":["EC:6.2.1.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"o-succinylbenzoate-CoA ligase activity","secondary_identifiers":["MetaCyc:O-SUCCINYLBENZOATE-COA-LIG-RXN","RHEA:17009","KEGG_REACTION:R04030"],"synonyms":[{"name":"2-succinylbenzoate:CoA ligase (AMP-forming)","type":"related"},{"name":"OSB-CoA synthetase activity","type":"related"},{"name":"o-succinylbenzoate:CoA ligase (AMP-forming)","type":"related"},{"name":"o-succinylbenzoyl-CoA synthetase activity","type":"related"},{"name":"o-succinylbenzoyl-coenzyme A synthetase activity","type":"related"}],"termid":"GO:0008756"}


id: PomGeneEx:0000020
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExProt","definition":"A gene expression qualifier that indicates that a protein is present at the same level under one set of conditions or at one indicated time as otherwise.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unchanged","termid":"PomGeneEx:0000004"},{"relation_name":"is_a","term_name":"protein expression level","termid":"PomGeneEx:0000010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein level unchanged","synonyms":[{"name":"protein expression unchanged","type":"exact"},{"name":"unchanged protein level","type":"exact"}],"termid":"PomGeneEx:0000020"}


id: PBO:0081928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 970, pseudogene","termid":"PBO:0081928"}


id: PBO:0057736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1324","termid":"PBO:0057736"}


id: GO:0051351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ligase activity, the catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catalytic activity","termid":"GO:0043085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ligase activity","synonyms":[{"name":"activation of ligase activity","type":"narrow"},{"name":"ligase activator","type":"exact"},{"name":"stimulation of ligase activity","type":"narrow"},{"name":"up regulation of ligase activity","type":"exact"},{"name":"up-regulation of ligase activity","type":"exact"},{"name":"upregulation of ligase activity","type":"exact"}],"termid":"GO:0051351"}


id: GO:0030829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of cGMP.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cGMP catabolic process (obsolete GO:0030829)","synonyms":[{"name":"regulation of cGMP breakdown","type":"exact"},{"name":"regulation of cGMP catabolism","type":"exact"},{"name":"regulation of cGMP degradation","type":"exact"}],"termid":"GO:0030829"}


id: PBO:0056563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance 10 replication initiation factor","termid":"PBO:0056563"}


id: GO:0034562
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,2-bis(4-hydroxyphenyl)-1-propanol + NADH + H+ + O2 = 2,3-bis(4-hydroxyphenyl)-1,2-propanediol + NAD+ + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,2-bis(4-hydroxyphenyl)-1-propanol hydroxylase activity (obsolete GO:0034562)","termid":"GO:0034562"}


id: GO:0034784
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methylbutanoyl-CoA = 2,2-dimethylpropanoyl-CoA.","definition_xrefs":["RHEA:52620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"pivalyl-CoA mutase activity","secondary_identifiers":["MetaCyc:RXN-18585","UM-BBD_reactionID:r1033"],"termid":"GO:0034784"}


id: MONDO:0004775
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"iridocyclitis","termid":"MONDO:0004773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"lens-induced iridocyclitis","secondary_identifiers":["DOID:9388","UMLS:C0339320","ICD9:364.23","MEDGEN:573082","SCTID:70461003"],"synonyms":[{"name":"lens-induced iridocyclitis","type":"exact"}],"termid":"MONDO:0004775","xrefs":{"Monarch":{"xref_id":"0004775"}}}


id: MONDO:0009610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"3-methylglutaconic aciduria (3-MGA) type I is an inborn error of leucine metabolism with a variable clinical phenotype ranging from mildly delayed speech to psychomotor retardation, coma, failure to thrive, metabolic acidosis and dystonia.","definition_xrefs":["Orphanet:67046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-methylglutaconic aciduria","termid":"MONDO:0017359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"3-methylglutaconic aciduria type 1","secondary_identifiers":["UMLS:C0342727","SCTID:237951008","NANDO:1200990","DOID:0110002","MESH:C562801","NCIT:C98683","OMIM:250950","icd11.foundation:899935975","GARD:10321","MEDGEN:90994"],"synonyms":[{"name":"3 alpha methylglutaconic aciduria type I","type":"related"},{"name":"3 methylglutaconic aciduria type 1","type":"related"},{"name":"3 methylglutaconyl CoA hydratase deficiency","type":"related"},{"name":"3-METHYLGLUTACONIC aciduria, type I","type":"related"},{"name":"3-MGCA type I (3-MGCA-1)","type":"related"},{"name":"3-Methylglutaconic aciduria, type 1","type":"related"},{"name":"3-Mg-Coa-hydratase deficiency","type":"related"},{"name":"3-methylglutaconic aciduria caused by mutation in AUH","type":"exact"},{"name":"3-methylglutaconic aciduria caused by mutation in auh","type":"exact"},{"name":"3-methylglutaconic aciduria type 1","type":"exact"},{"name":"3-methylglutaconic aciduria type I","type":"exact"},{"name":"3-methylglutaconyl-CoA hydratase deficiency","type":"exact"},{"name":"3-methylglutaconyl-CoA hydratase deficiency (auh defect)","type":"related"},{"name":"3-methylglutaconyl-Coa hydratase deficiency","type":"related"},{"name":"3MG CoA hydratase deficiency","type":"related"},{"name":"3MG-CoA hydratase deficiency","type":"exact"},{"name":"AUH 3-methylglutaconic aciduria","type":"exact"},{"name":"MGA type I","type":"exact"},{"name":"MGA1","type":"exact"},{"name":"MGCA1","type":"related"},{"name":"Mga, type 1","type":"related"},{"name":"auh 3-methylglutaconic aciduria","type":"exact"}],"termid":"MONDO:0009610","xrefs":{"Monarch":{"xref_id":"0009610"}}}


id: GO:0099092
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A network of proteins adjacent to the postsynaptic membrane forming an electron dense disc. Its major components include neurotransmitter receptors and the proteins that spatially and functionally organize neurotransmitter receptors in the adjacent membrane, such as anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic specialization, intracellular component","termid":"GO:0099091"},{"relation_name":"part_of","term_name":"postsynaptic density","termid":"GO:0014069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic density, intracellular component","termid":"GO:0099092"}


id: FYPO:0001240
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing N,N,N',N'-tetramethyldiazene-1,2-dicarboxamide, also known as diamide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000139","FYPO:0002058","FYPO:0000257","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on diamide","synonyms":[{"name":"normal cell population growth in presence of diamide","type":"exact"},{"name":"normal cell population growth on N,N,N',N'-tetramethyldiazene-1,2-dicarboxamide","type":"exact"},{"name":"normal cell population growth on diamide","type":"exact"},{"name":"normal cellular response to diamide","type":"related"},{"name":"normal vegetative cell population growth on diamide","type":"exact"}],"termid":"FYPO:0001240"}


id: PBO:0001624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3c","termid":"PBO:0001624"}


id: GO:0098821
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a member of the bone morphogenetic protein (BMP) family, and transmitting a signal across the plasma membrane to initiate a change in cell activity.","definition_xrefs":["GOC:BHF","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein serine/threonine kinase activity","termid":"GO:0004675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0140096","GO:0003824","GO:0016740","GO:0004672","GO:0038023","GO:0003674"],"is_obsolete":false,"name":"BMP receptor activity","termid":"GO:0098821"}


id: PBO:0000680
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcripts Altered in Meiosis","termid":"PBO:0000680"}


id: MONDO:0017896
data:
  {"annotated_genes":["SJAG_03453","SJAG_01970","SJAG_04067"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86787,85344,86786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008566"}]},"cv_name":"mondo","definition":"Familial nonmedullary thyroid carcinoma (fNMTC) is a rare non-syndromic form of thyroid cancer characterized by occurrence of thyroid carcinoma (TC) as the primary feature in a familial setting.","definition_xrefs":["Orphanet:319494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"thyroid gland carcinoma","termid":"MONDO:0015075"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01970":null,"SJAG_03453":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"familial nonmedullary thyroid carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3501843","MEDGEN:502247","GARD:21421","OMIMPS:188550"],"synonyms":[{"name":"thyroid cancer, nonmedullary","type":"exact"}],"termid":"MONDO:0017896","terms_by_termid":{"MONDO:0008566":null},"xrefs":{"Monarch":{"xref_id":"0017896"}}}


id: PBO:0047574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor binding protein 2","termid":"PBO:0047574"}


id: PATO:0001381
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A polyploidy quality inhering in a bearer by virtue of the bearer's containing three homologous sets of chromosomes.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Triploid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyploid","termid":"PATO:0001377"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triploid","termid":"PATO:0001381"}


id: PBO:0046376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTR1 pseudogene 2","termid":"PBO:0046376"}


id: GO:0070688
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that can methylate lysine-4 of histone H3 and plays an essential role in retinoic-acid-induced granulopoiesis. MLL5 is the catalytic methyltransferase subunit, and the complex also contains serine/threonine kinase 38 (STK38), protein phosphatase 1 catalytic subunits, the host cell factor-1 N-terminal subunit, beta-actin, and O-GlcNAc transferase; the human genes encoding the subunits are MLL5, STK38, PPP1CA, PPP1CB, PPP1CC, HCFC1, ACTB and OGT, respectively.","definition_xrefs":["GOC:mah","PMID:19377461"],"gene_count":0,"genotype_count":0,"name":"obsolete MLL5-L complex (obsolete GO:0070688)","termid":"GO:0070688"}


id: PBO:0075349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sclerostin domain containing 1","termid":"PBO:0075349"}


id: MONDO:0044302
data:
  {"annotated_genes":["SJAG_03967"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86362],"is_not":false,"summary":null,"term":"MONDO:0044302"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03967":null},"genotype_count":0,"is_obsolete":false,"name":"congenital heart defects, dysmorphic facial features, and intellectual developmental disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112247","MEDGEN:1385307","Orphanet:646278","OMIM:617360","UMLS:C4479246"],"synonyms":[{"name":"CDK13-related congenital heart defects-intellectual disability-facial dysmorphism syndrome","type":"exact"},{"name":"CHDFIDD","type":"related"},{"name":"congenital heart defects, dysmorphic FACIAL features, and intellectual developmental disorder","type":"related"}],"termid":"MONDO:0044302","terms_by_termid":{"MONDO:0044302":null},"xrefs":{"Monarch":{"xref_id":"0044302"}}}


id: MOD:01586
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-threonine residue and a glycine residue by an ester bond to form O-glycyl-L-threonine.","definition_xrefs":["PubMed:17502423","RESID:AA0496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ester crosslinked residues","termid":"MOD:00885"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycyl-L-threonine","synonyms":[{"name":"(2S,3R)-2-amino-3-[(aminoacetyl)oxy]butanoic acid","type":"exact"},{"name":"CROSSLNK Glycyl threonine ester (Gly-Thr) (interchain with T-...)","type":"exact"},{"name":"CROSSLNK Glycyl threonine ester (Thr-Gly) (interchain with G-...)","type":"exact"},{"name":"O-(glycyl)-L-threonine","type":"exact"},{"name":"O3-(2-aminoacetyl)threonine","type":"exact"},{"name":"threonine glycinate ester","type":"exact"}],"termid":"MOD:01586"}


id: PBO:0056921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"misshapen like kinase 1","termid":"PBO:0056921"}


id: PBO:0059551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Ser (UCN) 1","termid":"PBO:0059551"}


id: PBO:0091051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane calcium ion import channel Cch1","termid":"PBO:0091051"}


id: PBO:0017847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human TMEM165 homolog, implicated in calcium transport","termid":"PBO:0017847"}


id: PBO:0065410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha 7 pseudogene 1","termid":"PBO:0065410"}


id: GO:0043515
data:
  {"annotated_genes":["SJAG_00684"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[118814],"is_not":false,"summary":null,"term":"GO:0043515"}]},"cv_name":"molecular_function","definition":"Binding to a kinetochore, a proteinaceous structure on a condensed chromosome, beside the centromere, to which the spindle fibers are attached.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00684":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"kinetochore binding","references_by_uniquename":{"PMID:32109380":null},"termid":"GO:0043515","terms_by_termid":{"GO:0043515":null}}


id: PBO:0057236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 423","termid":"PBO:0057236"}


id: FYPO:0004315
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount, distribution, or morphology of all or part of the microtubule cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton","termid":"FYPO:0002399"},{"relation_name":"output_of","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000054","FYPO:0001320","FYPO:0000002","FYPO:0002399","FYPO:0005447"],"is_obsolete":false,"name":"abnormal microtubule cytoskeleton during vegetative growth","synonyms":[{"name":"abnormal microtubule cytoskeleton during mitotic cell cycle","type":"related"},{"name":"abnormal microtubule cytoskeleton physical object quality during vegetative growth","type":"exact"},{"name":"disorganized microtubule cytoskeleton during vegetative growth","type":"related"}],"termid":"FYPO:0004315"}


id: PBO:0113507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tubulin folding factor D involved in beta-tubulin (Tub2p) folding; isolated as mutant with increased chromosome loss and sensitivity to benomyl; CIN1 mRNA level is reduced when downstream gene MNE1 is deleted","termid":"PBO:0113507"}


id: FYPO:0004482
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which vacuole fusion, the merging of two vacuole membranes to form a single vacuole, is abnormal.","definition_xrefs":["GO:0042144","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuole organization during vegetative growth","termid":"FYPO:0000812"},{"relation_name":"is_a","term_name":"abnormal vacuole fusion","termid":"FYPO:0006057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal vacuole fusion during vegetative growth","synonyms":[{"name":"abnormal homotypic vacuole fusion during vegetative growth","type":"exact"},{"name":"abnormal vacuole fusion during mitotic cell cycle","type":"related"},{"name":"abnormal vacuole fusion, non-autophagic, during vegetative growth","type":"exact"}],"termid":"FYPO:0004482"}


id: MONDO:0030716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 66","secondary_identifiers":["UMLS:C5676945","DOID:0070565","MEDGEN:1806298","OMIM:619799"],"synonyms":[{"name":"SPGF66","type":"exact"},{"name":"spermatogenic failure 66","type":"exact"}],"termid":"MONDO:0030716","xrefs":{"Monarch":{"xref_id":"0030716"}}}


id: PBO:0069620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 897, pseudogene","termid":"PBO:0069620"}


id: GO:0140380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of psilocybin, a psychotropic tryptamine-derived natural product.","definition_xrefs":["PMID:28763571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-tryptophan metabolic process","termid":"GO:0006568"},{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"indole alkaloid biosynthetic process","termid":"GO:0035835"},{"relation_name":"is_a","term_name":"indole-containing compound biosynthetic process","termid":"GO:0042435"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520","GO:0019748"],"is_obsolete":false,"name":"psilocybin biosynthetic process","termid":"GO:0140380"}


id: MONDO:0006411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, highly aggressive carcinoma that arises from the sinonasal tract. It is characterized by the presence of small to medium size malignant cells. The prognosis is poor.","definition_xrefs":["NCIT:C54294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undifferentiated carcinoma","termid":"MONDO:0005617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"sinonasal undifferentiated carcinoma","secondary_identifiers":["EFO:1000527","MEDGEN:313704","ONCOTREE:SNUC","SCTID:697993003","UMLS:C1710096","DOID:0080799","MESH:C537344"],"synonyms":[{"name":"SNUC","type":"related"},{"name":"Sinonasal anaplastic carcinoma","type":"exact"},{"name":"highly aggressive undifferentiated carcinoma of the nasal cavity and paranasal sinuses","type":"related"},{"name":"sinonasal undifferentiated carcinoma","type":"exact"},{"name":"undifferentiated Sinonasal cancer","type":"exact"}],"termid":"MONDO:0006411","xrefs":{"Monarch":{"xref_id":"0006411"}}}


id: GO:0050548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: trans-feruloyl-CoA + H2O = 4-hydroxy-3-methoxyphenyl-beta-hydroxypropionyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-feruloyl-CoA hydratase activity (obsolete GO:0050548)","synonyms":[{"name":"4-hydroxy-3-methoxyphenyl-beta-hydroxypropanoyl-CoA hydro-lyase (trans-feruloyl-CoA-forming)","type":"related"},{"name":"trans-feruloyl-CoA hydro-lyase activity","type":"related"}],"termid":"GO:0050548"}


id: PBO:0064749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 85","termid":"PBO:0064749"}


id: PBO:0089812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan 1,4-alpha-glucosidase","termid":"PBO:0089812"}


id: PBO:0016948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Pos1","termid":"PBO:0016948"}


id: MONDO:0031280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stuve-Wiedemann syndrome","secondary_identifiers":["UMLS:C0796176","MEDGEN:167109","OMIMPS:601559"],"termid":"MONDO:0031280","xrefs":{"Monarch":{"xref_id":"0031280"}}}


id: GO:1902113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any nucleotide phosphorylation that is involved in DNA repair.","definition_xrefs":["GOC:TermGenie","PMID:11729194"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleotide phosphorylation involved in DNA repair (obsolete GO:1902113)","termid":"GO:1902113"}


id: PBO:0071219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 60","termid":"PBO:0071219"}


id: MONDO:0008937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar ataxia, benign, with thermoanalgesia","secondary_identifiers":["OMIM:212890","MESH:C565868","UMLS:C1859303","MEDGEN:349136"],"synonyms":[{"name":"cerebellar ataxia with loss of pain and temperature sensation","type":"related"},{"name":"cerebellar ataxia, benign, with thermoanalgesia","type":"exact"}],"termid":"MONDO:0008937","xrefs":{"Monarch":{"xref_id":"0008937"}}}


id: GO:0052236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a lower concentration of a specific chemical on or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative chemotaxis on or near other organism involved in symbiotic interaction (obsolete GO:0052236)","synonyms":[{"name":"negative chemotaxis on or near other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052236"}


id: PBO:0088694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L32","termid":"PBO:0088694"}


id: PBO:0089617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane beta-glucan biosynthesis protein","termid":"PBO:0089617"}


id: PBO:0066671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIPPLY3 pseudogene 1","termid":"PBO:0066671"}


id: PBO:0034387
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_paedomorphorsis_relationship_with","termid":"PBO:0034387"}


id: GO:1904392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ciliary neurotrophic factor stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:16914133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"response to ciliary neurotrophic factor","termid":"GO:1904391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to ciliary neurotrophic factor","termid":"GO:1904392"}


id: PBO:0080005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP12 divergent transcript","termid":"PBO:0080005"}


id: GO:0102978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxy-2,5-dimethylfuran-3-one + NADP = 4-hydroxy-5-methyl-2-methylenefuran-3-one + NADPH + H+.","definition_xrefs":["EC:1.3.1.105","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"furaneol oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN-9563","RHEA:39111"],"termid":"GO:0102978"}


id: GO:0008996
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of single-stranded RNA that is monophosphorylated at its 5'-end; cleavage occurs predominantly at positions 5 and 6 nucleotides from the 5'-end and in A + U-rich regions, and is blocked by the presence of a 5'-triphosphate group.","definition_xrefs":["PMID:16854990","PMID:10722715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA nuclease activity","termid":"GO:0004540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"ribonuclease G activity","termid":"GO:0008996"}


id: PBO:0064662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A like 4E","termid":"PBO:0064662"}


id: GO:0008132
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of proteins, including elastin.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pancreatic elastase activity (obsolete GO:0008132)","synonyms":[{"name":"pancreatic elastase activity","type":"exact"}],"termid":"GO:0008132"}


id: GO:0102485
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dATP + 2 H2O = dAMP + 2 hydrogenphosphate + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dATP phosphohydrolase activity (obsolete GO:0102485)","termid":"GO:0102485"}


id: PBO:0047766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOSL1 pseudogene 1","termid":"PBO:0047766"}


id: PBO:0064359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pro-melanin concentrating hormone like 2 (pseudogene)","termid":"PBO:0064359"}


id: GO:0002286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte activation involved in immune response","termid":"GO:0002285"},{"relation_name":"is_a","term_name":"T cell activation","termid":"GO:0042110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell activation involved in immune response","synonyms":[{"name":"T cell activation during immune response","type":"related"},{"name":"T lymphocyte activation during immune response","type":"related"},{"name":"T-cell activation during immune response","type":"related"},{"name":"T-lymphocyte activation during immune response","type":"related"}],"termid":"GO:0002286"}


id: PR:O43003
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mmf1 gene.","definition_xrefs":["UniProtKB:O43003","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein mmf1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.04c","synonyms":[{"name":"Spom972h-mmf1","type":"exact"},{"name":"isoleucine biosynthesis and maintenance of intact mitochondria 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"maintenance of mitochondrial function 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43003"}


id: GO:0060857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the glial barrier between the blood and the brain. The glial cells in the brain are packed tightly together preventing the passage of most molecules from the blood into the brain. Only lipid soluble molecules or those that are actively transported can pass through the blood-brain barrier.","definition_xrefs":["PMID:20080302","GOC:sart","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell development","termid":"GO:0021782"},{"relation_name":"is_a","term_name":"establishment of blood-brain barrier","termid":"GO:0060856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of glial blood-brain barrier","synonyms":[{"name":"establishment of glial BBB","type":"exact"},{"name":"establishment of glial blood/brain barrier","type":"exact"}],"termid":"GO:0060857"}


id: MOD:00712
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to a methylated proline, such as N,N-dimethylproline.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated proline","synonyms":[{"name":"MePro","type":"exact"}],"termid":"MOD:00712"}


id: GO:0036140
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl L-asparagine + 2-oxoglutarate + O2 = peptidyl 3-hydroxy-L-asparagine + succinate + CO2.","definition_xrefs":["RHEA:54260","GOC:reh","PMID:12215170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"[protein]-asparagine 3-dioxygenase activity","secondary_identifiers":["GO:0102113"],"synonyms":[{"name":"hypoxia-inducible factor-asparagine oxygenase activity","type":"narrow"},{"name":"peptidyl-asparagine 3-dioxygenase activity","type":"exact"}],"termid":"GO:0036140"}


id: PBO:0027158
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vacuolar_alanine_level","termid":"PBO:0027158"}


id: PBO:0075906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6","termid":"PBO:0075906"}


id: GO:0002577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"regulates","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation","termid":"GO:0002577"}


id: GO:1905384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to presynapse.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:TermGenie","PMID:24449494","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to synapse","termid":"GO:1902473"},{"relation_name":"regulates","term_name":"protein localization to presynapse","termid":"GO:1905383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to presynapse","synonyms":[{"name":"regulation of protein localisation in presynapse","type":"exact"},{"name":"regulation of protein localisation to presynapse","type":"exact"},{"name":"regulation of protein localization in presynapse","type":"exact"},{"name":"regulation of recruitment of presynaptic proteins","type":"exact"}],"termid":"GO:1905384"}


id: PBO:0078906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 15-1","termid":"PBO:0078906"}


id: PBO:0079475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twinkle mtDNA helicase","termid":"PBO:0079475"}


id: PBO:0086031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function, abundance changes with carbon source","termid":"PBO:0086031"}


id: PBO:0043741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 7A2","termid":"PBO:0043741"}


id: PBO:0046687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein subunit beta","termid":"PBO:0046687"}


id: FYPO:0006125
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to a nuclear body is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to nuclear body","synonyms":[{"name":"normal protein localisation to nuclear body","type":"exact"},{"name":"normal protein localization to nuclear body during mitotic cell cycle","type":"related"},{"name":"normal protein localization to nuclear body during vegetative growth","type":"exact"}],"termid":"FYPO:0006125"}


id: MONDO:0015736
data:
  {"annotated_genes":["SJAG_03145","SJAG_03379","SJAG_04887"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008070"},{"annotations":[84650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012239"},{"annotations":[86210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009725"}]},"cv_name":"mondo","definition":"Intermediate nemaline myopathy is a type of nemaline myopathy (NM) that shows features of typical NM in neonates with a more severe progression.","definition_xrefs":["Orphanet:171433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of alpha-actin","termid":"MONDO:0016193"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of nebulin","termid":"MONDO:0016194"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of tropomyosin","termid":"MONDO:0017303"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03145":null,"SJAG_03379":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"intermediate nemaline myopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:12823","icd11.foundation:1667070006","UMLS:C5680452","MEDGEN:1803914"],"synonyms":[{"name":"Intermediate congenital NM","type":"related"},{"name":"Intermediate congenital nemaline myopathy","type":"related"}],"termid":"MONDO:0015736","terms_by_termid":{"MONDO:0008070":null,"MONDO:0009725":null,"MONDO:0012239":null},"xrefs":{"Monarch":{"xref_id":"0015736"}}}


id: GO:0052234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a lower concentration of environmental oxygen on or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative aerotaxis on or near other organism involved in symbiotic interaction (obsolete GO:0052234)","synonyms":[{"name":"negative aerotaxis on or near other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052234"}


id: PBO:0064623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrophosphatase (inorganic) 1 pseudogene","termid":"PBO:0064623"}


id: PATO:0001220
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001220 angle_unit (obsolete PATO:0001220)","termid":"PATO:0001220"}


id: PBO:0047762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folate receptor 3 pseudogene 1","termid":"PBO:0047762"}


id: FYPO:0006508
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the telomere is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"},{"relation_name":"output_of","term_name":"abnormal telomere maintenance","termid":"FYPO:0007415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0000002","FYPO:0001985","FYPO:0000293"],"is_obsolete":false,"name":"abnormal telomere morphology","termid":"FYPO:0006508"}


id: PBO:0086605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression repressed in carbon limited vs carbon replete chemostat cultures; non-essential gene; contains a PH-like domain; RBH2 has a paralog, RBH1, that arose from the whole genome duplication","termid":"PBO:0086605"}


id: GO:0100070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates fatty acid biosynthetic process.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of fatty acid biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100070)","termid":"GO:0100070"}


id: PBO:0005463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-di-phosphooligosaccharide-protein glycotransferase subunit Wbp1 (predicted)","termid":"PBO:0005463"}


id: PBO:0088102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ureidoglycolate lyase; converts ureidoglycolate to glyoxylate and urea in the third step of allantoin degradation; expression is sensitive to nitrogen catabolite repression; this enzyme is sometimes referred to 'ureidoglycolate hydrolase' but should not be confused with the Arabidopsis thaliana ureidoglycolate hydrolase enzyme which converts ureidoglycolate to glyoxylate, ammonia and carbon dioxide","termid":"PBO:0088102"}


id: PBO:0001622
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.6.1","termid":"PBO:0001622"}


id: PBO:0067216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 283, pseudogene","termid":"PBO:0067216"}


id: MONDO:0006022
data:
  {"annotated_genes":["SJAG_01183","SJAG_00516"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011422"},{"annotations":[85626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011268"}]},"cv_name":"mondo","definition":"An abnormally high acidity of the blood and other body tissues. Acidosis can be either respiratory or metabolic.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hematologic disorder","termid":"MONDO:0005570"},{"relation_name":"is_a","term_name":"disorder of acid-base balance","termid":"MONDO:0041261"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00516":null,"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"acidosis disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:1000014","ICD9:276.2","SCTID:51387008","MEDGEN:1296","HP:0001941","UMLS:C0001122"],"synonyms":[{"name":"acidosis","type":"exact"}],"termid":"MONDO:0006022","terms_by_termid":{"MONDO:0011268":null,"MONDO:0011422":null},"xrefs":{"Monarch":{"xref_id":"0006022"}}}


id: MOD:01342
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00530. Remap to MOD:00530.","definition_xrefs":["Unimod:162","PubMed:12148805"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01342 selenium substitution for sulfur - site M (obsolete MOD:01342)","synonyms":[{"name":"Delta:S(-1)Se(1)","type":"related"},{"name":"Selenium replaces sulphur","type":"related"}],"termid":"MOD:01342"}


id: PBO:0014620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"name deriviation, Calmodulin-dependent Kinase Kinase","termid":"PBO:0014620"}


id: PBO:0060381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VIIA and Rab interacting protein","termid":"PBO:0060381"}


id: MONDO:0100082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Noonan syndrome with multiple lentigines in which the cause of the disease is a heterozygous mutation in the PTPN11 gene on chromosome 12q24.","definition_xrefs":["PMID:12058348","OMIM:151100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Noonan syndrome with multiple lentigines","termid":"MONDO:0007893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0000426"],"is_obsolete":false,"name":"LEOPARD syndrome 1","secondary_identifiers":["DOID:0080548","UMLS:C4551484","MEDGEN:1631694"],"synonyms":[{"name":"LEOPARD syndrome 1","type":"exact"},{"name":"LEOPARD syndrome type 1","type":"exact"},{"name":"LPRD1","type":"exact"},{"name":"lentiginosis, cardiomyopathic","type":"exact"},{"name":"multiple lentigines syndrome","type":"exact"}],"termid":"MONDO:0100082","xrefs":{"Monarch":{"xref_id":"0100082"}}}


id: PBO:0080132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VANGL planar cell polarity protein 2","termid":"PBO:0080132"}


id: GO:0004875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with any component or product of the complement cascade and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:add","GOC:signaling","ISBN:0781735149","PMID:11884446","GOC:pg","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"},{"relation_name":"is_a","term_name":"immune receptor activity","termid":"GO:0140375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"complement receptor activity","secondary_identifiers":["GO:0004942"],"synonyms":[{"name":"anaphylatoxin receptor activity","type":"related"}],"termid":"GO:0004875"}


id: MONDO:0000389
data:
  {"annotated_genes":["SJAG_02463","SJAG_01941"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86227,86228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009727"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"atelosteogenesis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:108720","MEDGEN:1806597","SCTID:43814000","DOID:0050648","UMLS:C5574658"],"termid":"MONDO:0000389","terms_by_termid":{"MONDO:0009727":null},"xrefs":{"Monarch":{"xref_id":"0000389"}}}


id: GO:0016569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration of DNA or protein in chromatin by the covalent addition or removal of chemical groups.","definition_xrefs":["GOC:vw","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete covalent chromatin modification (obsolete GO:0016569)","synonyms":[{"name":"chromatin modification","type":"exact"}],"termid":"GO:0016569"}


id: GO:0031507
data:
  {"annotated_genes":["SJAG_02698","SJAG_01008","SJAG_02416","SJAG_01938","SJAG_03942","SJAG_01331","SJAG_03945","SJAG_03193","SJAG_04061","SJAG_03047","SJAG_04186","SJAG_02409","SJAG_04253","SJAG_02311","SJAG_00676","SJAG_01579","SJAG_01610","SJAG_03042","SJAG_04942","SJAG_02778","SJAG_03982","SJAG_03118","SJAG_00302","SJAG_04213","SJAG_02990","SJAG_02908","SJAG_01836","SJAG_00335","SJAG_02382","SJAG_00266","SJAG_02381","SJAG_03916","SJAG_03664","SJAG_01867","SJAG_00934","SJAG_01601","SJAG_00341","SJAG_05313","SJAG_02723","SJAG_02576","SJAG_04039","SJAG_04879","SJAG_03543","SJAG_01675","SJAG_01823","SJAG_01046","SJAG_04369","SJAG_01599","SJAG_03624","SJAG_01878","SJAG_00160","SJAG_03635","SJAG_04768","SJAG_01511","SJAG_02622","SJAG_00701","SJAG_04030","SJAG_00961","SJAG_02592","SJAG_02342","SJAG_00414","SJAG_02725","SJAG_03128","SJAG_01075","SJAG_01745","SJAG_03844","SJAG_02401","SJAG_00142","SJAG_04141","SJAG_00581","SJAG_01540","SJAG_02621","SJAG_04574","SJAG_02165","SJAG_00756","SJAG_03356","SJAG_00058","SJAG_02119","SJAG_01873","SJAG_03997","SJAG_04755","SJAG_02846","SJAG_00769","SJAG_02594","SJAG_00087","SJAG_03689","SJAG_03680","SJAG_02701","SJAG_02817"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90236,90754,91274,92086,93835,94093,101510,101511,101512,101910,103592,103690,103691,108957,109441,111700,112106,112107,112108,113480,113614,114502,114905,117208,119118,119119],"is_not":false,"summary":null,"term":"GO:0031507"},{"annotations":[110759,113099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140719"},{"annotations":[93562,102724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140718"},{"annotations":[98405,98651,112105,116619,114750,101507,112549,112103,87631,101509,112104,95646,117254,90235,102555,101508,102725,98625,93563],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0033696"},{"annotations":[106142],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0061188"},{"annotations":[107979],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0060906"},{"annotations":[101518,101517,89527,98631,112788,90755,96219,102727,103593,111701,89691,92926,102280,113483,113913,112112,112113,107647,110762,109977,112114,92307,91557,97755,101516,93565,111598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031508"},{"annotations":[90830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140462"},{"annotations":[98465],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0031453"},{"annotations":[90668],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090053"},{"annotations":[93858,109837,90669],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090055"},{"annotations":[91558,107648,103594,112789,113914,89528,111599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000183"},{"annotations":[98068,90294],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0031445"},{"annotations":[99799,96678],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090052"},{"annotations":[117255],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010964"},{"annotations":[117256,117616,96679,99800,91348],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902801"},{"annotations":[117592,112551,106844,108607,103595,107270,114065,111350,99063,117480,113165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031048"},{"annotations":[98632,113166,109978,112790,91559,103692,111702,90756,117593,117198,93566,96220,111600,102730,92233,103596,110700,107464,110763,95007,107649,99065,113484,115483,118314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030466"},{"annotations":[90277,103693,109979,116034,117619,86975,111601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902794"},{"annotations":[105800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902795"},{"annotations":[113485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141194"},{"annotations":[118315,110145,113167,96221,117595,114066,115484,88309,111703,93578,94822,117199,98633,114920,90757,88254,106040,109980,117481,110701,113800,99067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140727"},{"annotations":[96222,89692,110764,109981,107650,118316,111602,87904,91560,117596,102731,103597,112791,113168,93567,117200,98634,97756,103694,113486,89530,90758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031509"},{"annotations":[116036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141005"}]},"cv_name":"biological_process","definition":"An epigenetic gene silencing mechanism in which chromatin is compacted into heterochromatin, resulting in a chromatin conformation refractory to transcription. 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id: PBO:0017717
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pol1 promoter region contains 5 near matches to the MluI cell cycle box (MCB) consensus sequence","termid":"PBO:0017717"}


id: GO:0010322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of isopentenyl diphosphate produced via the methylerythritol (MEP) pathway (mevalonate-independent).","definition_xrefs":["PMID:16531478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate metabolic process","termid":"GO:0006109"},{"relation_name":"is_a","term_name":"regulation of ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"regulation of phospholipid biosynthetic process","termid":"GO:0071071"},{"relation_name":"regulates","term_name":"isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway","termid":"GO:0019288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway","synonyms":[{"name":"regulation of isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway","type":"exact"}],"termid":"GO:0010322"}


id: FYPO:0007881
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of  histone H2A phosphorylation is longer than normal during a cellular response to methyl methanesulfonate. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be affected.","definition_xrefs":["PomBase:mah","PMID:34608864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of histone H2A phosphorylation during cellular response to methyl methanesulfonate","synonyms":[{"name":"increased duration of histone H2A phosphorylation during cellular response to MMS","type":"exact"},{"name":"increased duration of histone H2A phosphorylation during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"increased duration of histone H2A phosphorylation during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"prolonged histone H2A phosphorylation during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0007881"}


id: GO:0046287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving isoflavonoids, a group of water-soluble phenolic derivatives, isomeric with flavonoids, containing a flavan skeleton. They are differentiated from flavonoids by the point of attachment of the aromatic ring group.","definition_xrefs":["GOC:ai","PMID:15734910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"isoflavonoid metabolic process","synonyms":[{"name":"isoflavonoid metabolism","type":"exact"}],"termid":"GO:0046287"}


id: PBO:0049870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helicase with zinc finger 2","termid":"PBO:0049870"}


id: PBO:0049817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 9","termid":"PBO:0049817"}


id: PBO:0028581
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclease_activity","termid":"PBO:0028581"}


id: GO:0062102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Division of a female germline stem cell to produce two germline stem cells of the same type as the parent.","definition_xrefs":["GOC:ha","PMID:30248087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germline stem cell symmetric division","termid":"GO:0098729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female germline stem cell symmetric division","termid":"GO:0062102"}


id: PBO:0060213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mevalonate diphosphate decarboxylase","termid":"PBO:0060213"}


id: GO:0170037
data:
  {"annotated_genes":["SJAG_02484","SJAG_02602"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990616"},{"annotations":[75059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090374"}]},"cv_name":"biological_process","definition":"The directed movement of substances from the mitochondrion to the cytosol.","definition_xrefs":["GOC:ew"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02484":null,"SJAG_02602":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"export from the mitochondrion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0170037","terms_by_termid":{"GO:0090374":null,"GO:1990616":null}}


id: PBO:0074907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 78","termid":"PBO:0074907"}


id: PBO:0003099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like protein modifier Hub1","termid":"PBO:0003099"}


id: MONDO:0000921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm involving the ampulla of Vater.","definition_xrefs":["NCIT:C4443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"common bile duct neoplasm","termid":"MONDO:0006709"},{"relation_name":"is_a","term_name":"tumor of duodenum","termid":"MONDO:0021375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"ampulla of vater neoplasm","secondary_identifiers":["UMLS:C0345916","ONCOTREE:AMPULLAOFVATER","MEDGEN:138029","SCTID:126858004","DOID:10022"],"synonyms":[{"name":"AMPULLAOFVATER","type":"related"},{"name":"ampulla of Vater tumor","type":"exact"},{"name":"ampulla of Vater tumour","type":"exact"},{"name":"hepatopancreatic ampulla neoplasm","type":"exact"},{"name":"hepatopancreatic ampulla neoplasm (disease)","type":"exact"},{"name":"hepatopancreatic ampulla tumor","type":"exact"},{"name":"hepatopancreatic ampulla tumour","type":"exact"},{"name":"neoplasm of ampulla of Vater","type":"exact"},{"name":"neoplasm of hepatopancreatic ampulla","type":"exact"},{"name":"neoplasm of the ampulla of Vater","type":"exact"},{"name":"tumor of ampulla of Vater","type":"exact"},{"name":"tumor of hepatopancreatic ampulla","type":"exact"},{"name":"tumor of the ampulla of Vater","type":"exact"},{"name":"tumour of ampulla of Vater","type":"exact"},{"name":"tumour of hepatopancreatic ampulla","type":"exact"},{"name":"tumour of the ampulla of Vater","type":"exact"}],"termid":"MONDO:0000921","xrefs":{"Monarch":{"xref_id":"0000921"}}}


id: PBO:0076336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 4","termid":"PBO:0076336"}


id: PR:O14110
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An aminomethyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminomethyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.14","secondary_identifiers":["UniProtKB:O14110"],"synonyms":[{"name":"GCVT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-AMT","type":"exact"},{"name":"glycine cleavage system T protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14110"}


id: GO:0014715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process taking place in the trunk whereby the developmental fate of a cell becomes restricted such that it will develop into a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["GOC:mtg_muscle","CL:0000056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoblast fate commitment","termid":"GO:0048625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast fate commitment in trunk","termid":"GO:0014715"}


id: PBO:0109651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDKN2A antisense RNA 1","termid":"PBO:0109651"}


id: MONDO:0009923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disorder of sex development (DSD) due to a defect in metabolizing testosterone to dihydrotestosterone and characterized by incomplete intrauterine masculinization which ranges from a female genitalia with a blind vaginal pouch to a fully male phenotype with pseudovaginal posterior hypospadias and micropenis.","definition_xrefs":["Orphanet:753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"46,XY disorder of sex development","termid":"MONDO:0020040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"46,XY disorder of sex development due to 5-alpha-reductase 2 deficiency","secondary_identifiers":["icd11.foundation:1028755501","MESH:C535830","UMLS:C0268297","NANDO:2200389","NCIT:C98699","OMIM:264600","MedDRA:10000029","SCTID:57514000","GARD:5680","MEDGEN:75667"],"synonyms":[{"name":"3-oxo-5 Alpha-steroid Delta 4-dehydrogenase deficiency","type":"exact"},{"name":"46,XY DSD due to 5-alpha-reductase 2 deficiency","type":"exact"},{"name":"46,XY disorder of sex development due to 5-alpha-reductase 2 deficiency","type":"exact"},{"name":"5 Alpha steroid reductase 2 deficiency","type":"exact"},{"name":"5-alpha reductase deficiency","type":"related"},{"name":"Male pseudohermaphroditism due to 5-Alpha-reductase deficiency","type":"related"},{"name":"Male pseudohermaphroditism due to 5-alpha-reductase 2 deficiency","type":"exact"},{"name":"PPSH","type":"related"},{"name":"familial incomplete Male pseudohermaphroditism, type 2","type":"related"},{"name":"micropenis","type":"related"},{"name":"pseudovaginal perineoscrotal hypospadias","type":"exact"},{"name":"steroid 5-alpha-reductase deficiency","type":"exact"}],"termid":"MONDO:0009923","xrefs":{"Monarch":{"xref_id":"0009923"}}}


id: PBO:0086794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YAL037W has a paralog, YOR342C, that arose from the whole genome duplication","termid":"PBO:0086794"}


id: PBO:0003072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-1,6-bisphosphatase Fbp1","termid":"PBO:0003072"}


id: PR:Q9P7L8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sap62 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7L8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor sap62 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.05","synonyms":[{"name":"Spom972h-sap62","type":"exact"},{"name":"spliceosome-associated protein 62 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7L8"}


id: PBO:0083718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein with chaperone and co-chaperone activity; involved in retention of resident ER proteins; has a role in recognizing proteins targeted for ER-associated degradation (ERAD), member of the protein disulfide isomerase family","termid":"PBO:0083718"}


id: GO:0043872
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: lysine(out) + cadaverine(in) = lysine(in) + cadaverine(out).","definition_xrefs":["PMID:10986235","TC:2.A.3.2.2","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"lysine:cadaverine antiporter activity","secondary_identifiers":["GO:0015490","GO:0015497"],"synonyms":[{"name":"cadaverine transmembrane transporter activity","type":"narrow"},{"name":"cadaverine:lysine antiporter activity","type":"exact"},{"name":"lysine-cadaverine antiporter activity","type":"exact"},{"name":"lysine/cadaverine antiporter activity","type":"exact"}],"termid":"GO:0043872"}


id: PBO:0078962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon AGA) 2-5","termid":"PBO:0078962"}


id: GO:1900729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of adenylate cyclase-inhibiting opioid receptor signaling pathway.","definition_xrefs":["GOC:TermGenie","GOC:sjw","PMID:17157995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of opioid receptor signaling pathway","termid":"GO:2000474"},{"relation_name":"regulates","term_name":"adenylate cyclase-inhibiting opioid receptor signaling pathway","termid":"GO:0031635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of adenylate cyclase-inhibiting opioid receptor signaling pathway","synonyms":[{"name":"regulation of inhibition of adenylate cyclase activity by opioid receptor","type":"related"},{"name":"regulation of inhibition of adenylate cyclase activity by opioid receptor signaling pathway","type":"related"},{"name":"regulation of inhibition of adenylate cyclase activity by opioid receptor signalling pathway","type":"related"},{"name":"regulation of opioid receptor-mediated adenylate cyclase inhibition","type":"related"}],"termid":"GO:1900729"}


id: GO:0031397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the addition of ubiquitin groups to a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein ubiquitination","termid":"GO:0031396"},{"relation_name":"is_a","term_name":"negative regulation of protein modification by small protein conjugation or removal","termid":"GO:1903321"},{"relation_name":"negatively_regulates","term_name":"protein ubiquitination","termid":"GO:0016567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"negatively_regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"negative regulation of protein ubiquitination","synonyms":[{"name":"down regulation of protein ubiquitination","type":"exact"},{"name":"down-regulation of protein ubiquitination","type":"exact"},{"name":"downregulation of protein ubiquitination","type":"exact"},{"name":"inhibition of protein ubiquitination","type":"narrow"}],"termid":"GO:0031397"}


id: PBO:0028592
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_cellular_response_to_heat","termid":"PBO:0028592"}


id: PBO:0091464
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ChiTinaSe 2","termid":"PBO:0091464"}


id: PBO:0066529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RGPD4 antisense RNA 1 (head to head)","termid":"PBO:0066529"}


id: PBO:0072977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 2B member 1, pseudogene","termid":"PBO:0072977"}


id: PBO:0085846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; phosphorylated in response to alpha factor; protein abundance increases in response to DNA replication stress","termid":"PBO:0085846"}


id: GO:0051558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phlobaphenes, red pigments with oligomeric or polymeric structure derived from the flavonoid intermediate flavan-4-ols.","definition_xrefs":["PMID:11402179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment metabolic process","termid":"GO:0042440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phlobaphene metabolic process","synonyms":[{"name":"phlobaphene metabolism","type":"exact"}],"termid":"GO:0051558"}


id: PBO:0072574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleotide reductase M2 polypeptide pseudogene 2","termid":"PBO:0072574"}


id: GO:0003429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structures of a chondrocyte in the growth plate cartilage are generated and organized.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chondrocyte morphogenesis involved in endochondral bone morphogenesis","termid":"GO:0003414"},{"relation_name":"is_a","term_name":"growth plate cartilage morphogenesis","termid":"GO:0003422"},{"relation_name":"part_of","term_name":"growth plate cartilage chondrocyte differentiation","termid":"GO:0003418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"growth plate cartilage chondrocyte morphogenesis","termid":"GO:0003429"}


id: PBO:0083053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Diacylglycerol pyrophosphate (DGPP) phosphatase; zinc-regulated vacuolar membrane-associated lipid phosphatase, dephosphorylates DGPP to phosphatidate (PA) and Pi, then PA to diacylglycerol; involved in lipid signaling and cell metabolism","termid":"PBO:0083053"}


id: FYPO:0006443
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription of amino acid biosynthesis genes from RNA polymerase II promoters occurs to a lower extent than normal. Amino acid biosynthesis genes are those whose products are involved in amino acid biosynthetic processes.","definition_xrefs":["PMID:29432178","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription from RNA polymerase II promoter during vegetative growth","termid":"FYPO:0005229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000294","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased transcription of amino acid biosynthesis genes","synonyms":[{"name":"decreased transcription of amino acid biosynthesis genes during mitotic cell cycle","type":"related"},{"name":"decreased transcription of amino acid biosynthesis genes during vegetative growth","type":"exact"},{"name":"decreased transcription of amino acid biosynthesis genes from RNA pol II promoter","type":"exact"},{"name":"reduced transcription of amino acid biosynthesis genes","type":"exact"}],"termid":"FYPO:0006443"}


id: FYPO:0002071
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has a nucleus in an abnormal location. The normal location of a single nucleus is at the midpoint of the long axis of the cell (during mitotic telophase, daughter nuclei normally move away from the cell division site).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"},{"relation_name":"is_a","term_name":"mislocalized nucleus","termid":"FYPO:0002069"},{"relation_name":"output_of","term_name":"abnormal nucleus positioning during vegetative growth","termid":"FYPO:0001338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"mislocalized nucleus during vegetative growth","synonyms":[{"name":"abnormal nucleus location during vegetative growth","type":"exact"},{"name":"abnormal nucleus position during vegetative growth","type":"exact"},{"name":"displaced nucleus during vegetative growth","type":"exact"},{"name":"mislocalised nucleus during vegetative growth","type":"exact"},{"name":"mislocalized nucleus during mitotic cell cycle","type":"related"},{"name":"misplaced nuclei during vegetative growth","type":"exact"},{"name":"misplaced nucleus during vegetative growth","type":"exact"},{"name":"nuclear displacement during vegetative growth","type":"exact"}],"termid":"FYPO:0002071"}


id: PBO:0091400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP2A catalytic subunit Ppa1","termid":"PBO:0091400"}


id: FYPO:0002039
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of deadenylation-independent decapping of nuclear-transcribed mRNA is decreased. All RNA decapping may be decreased, or one or more specific RNA molecules may be selectively affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal deadenylation-independent decapping of nuclear-transcribed mRNA","termid":"FYPO:0002038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased deadenylation-independent decapping of nuclear-transcribed mRNA","synonyms":[{"name":"decreased deadenylation-independent decapping of nuclear-transcribed mRNA during mitotic cell cycle","type":"related"},{"name":"decreased deadenylation-independent decapping of nuclear-transcribed mRNA during vegetative growth","type":"exact"},{"name":"reduced deadenylation-independent decapping of nuclear-transcribed mRNA","type":"exact"}],"termid":"FYPO:0002039"}


id: PBO:0088082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain-containing protein that interacts with Cdc48p; involved in degradation of polyubiquitinated proteins via the ERAD (ER-associated degradation) pathway; modulates the role of the Cdc48p-Nplp-Ufd1p AAA ATPase complex in delivery of misfolded proteins to the proteasome; protein abundance increases in response to DNA replication stress; human ortholog ASPSCR1 partially complements the yeast null mutant","termid":"PBO:0088082"}


id: MONDO:0014056
data:
  {"annotated_genes":["SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86754],"is_not":false,"summary":null,"term":"MONDO:0014056"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"susceptibility to familial cutaneous melanoma","termid":"MONDO:0024462"},{"relation_name":"is_a","term_name":"glioma susceptibility","termid":"MONDO:0100242"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"melanoma, cutaneous malignant, susceptibility to, 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:615134","MEDGEN:767488","UMLS:C3554574"],"synonyms":[{"name":"CMM9","type":"related"},{"name":"melanoma, cutaneous malignant, 9","type":"exact"},{"name":"melanoma, cutaneous malignant, susceptibility to, 9","type":"exact"},{"name":"melanoma, cutaneous malignant, susceptibility to, type 9","type":"exact"},{"name":"susceptibility to cutaneous malignant melanoma 9","type":"related"}],"termid":"MONDO:0014056","terms_by_termid":{"MONDO:0014056":null},"xrefs":{"Monarch":{"xref_id":"0014056"}}}


id: GO:0110014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of aggregation involved in sorocarp development. Aggregation involved in sorocarp development is the process whose specific outcome is the progression of the aggregate over time, from its formation to the point when a slug is formed. Aggregate development begins in response to starvation and continues by the chemoattractant-mediated movement of cells toward each other. The aggregate is a multicellular structure that gives rise to the slug.","definition_xrefs":["PMID:28257811","GOC:rjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to nutrient levels","termid":"GO:0032108"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of aggregation involved in sorocarp development","termid":"GO:0060176"},{"relation_name":"negatively_regulates","term_name":"aggregation involved in sorocarp development","termid":"GO:0031152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of aggregation involved in sorocarp development","termid":"GO:0110014"}


id: PBO:0083291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; open reading frame is located in promoter region of essential gene SEC31","termid":"PBO:0083291"}


id: PR:O94587
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial inner membrane protein COX18 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12428:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein cox18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.15c","secondary_identifiers":["UniProtKB:O94587"],"synonyms":[{"name":"SPCC1442.15c","type":"related"},{"name":"Sp3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-COX18","type":"exact"},{"name":"cox18sp+ (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"oxa1-3","type":"related"},{"name":"oxa103","type":"related"}],"termid":"PR:O94587"}


id: PBO:0073966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 15","termid":"PBO:0073966"}


id: PBO:0059093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mortality factor 4 (pseudogene)","termid":"PBO:0059093"}


id: FYPO:0005161
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell cycle progression resumes after a longer time than normal after exposure to hydroxyurea.","definition_xrefs":["PomBase:mah","PMID:16849602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"delayed onset of cell cycle progression following cellular response to hydroxyurea","synonyms":[{"name":"delayed cell cycle progression following HU exposure","type":"exact"},{"name":"delayed cell cycle progression following cellular response to HU","type":"exact"},{"name":"delayed cell cycle progression following cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0005161"}


id: GO:0106024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate of onset of pupariation.","definition_xrefs":["PMID:26510564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of post-embryonic development","termid":"GO:0048581"},{"relation_name":"is_a","term_name":"regulation of pupariation","termid":"GO:0106023"},{"relation_name":"negatively_regulates","term_name":"pupariation","termid":"GO:0035073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pupariation","termid":"GO:0106024"}


id: PBO:0090318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol monophosphatase-like protein","termid":"PBO:0090318"}


id: PBO:0081402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 250","termid":"PBO:0081402"}


id: FYPO:0001293
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell wall biogenesis is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal cell wall biogenesis","synonyms":[{"name":"normal cell wall biogenesis during mitotic cell cycle","type":"related"},{"name":"normal cell wall biogenesis during vegetative growth","type":"exact"},{"name":"normal fungal-type cell wall biogenesis","type":"exact"}],"termid":"FYPO:0001293"}


id: PBO:0048894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 14, pseudogene","termid":"PBO:0048894"}


id: PBO:0043482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canopy FGF signaling regulator 4","termid":"PBO:0043482"}


id: GO:0048237
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membranes of the rough endoplasmic reticulum.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum lumen","termid":"GO:0005788"},{"relation_name":"part_of","term_name":"rough endoplasmic reticulum","termid":"GO:0005791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005783"],"is_obsolete":false,"name":"rough endoplasmic reticulum lumen","secondary_identifiers":["NIF_Subcellular:sao1819509473"],"synonyms":[{"name":"RER lumen","type":"exact"},{"name":"rough ER lumen","type":"exact"}],"termid":"GO:0048237"}


id: GO:0045224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of CD4.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glycoprotein biosynthetic process","termid":"GO:0010560"},{"relation_name":"is_a","term_name":"regulation of CD4 production","termid":"GO:0045223"},{"relation_name":"positively_regulates","term_name":"CD4 biosynthetic process","termid":"GO:0045222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of CD4 production","synonyms":[{"name":"activation of CD4 biosynthetic process","type":"narrow"},{"name":"positive regulation of CD4 anabolism","type":"exact"},{"name":"positive regulation of CD4 biosynthesis","type":"exact"},{"name":"positive regulation of CD4 biosynthetic process","type":"exact"},{"name":"positive regulation of CD4 formation","type":"exact"},{"name":"positive regulation of CD4 synthesis","type":"exact"},{"name":"stimulation of CD4 biosynthetic process","type":"narrow"},{"name":"up regulation of CD4 biosynthetic process","type":"exact"},{"name":"up-regulation of CD4 biosynthetic process","type":"exact"},{"name":"upregulation of CD4 biosynthetic process","type":"exact"}],"termid":"GO:0045224"}


id: PBO:0056587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of DNA damage checkpoint 1","termid":"PBO:0056587"}


id: PBO:0057044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 133b","termid":"PBO:0057044"}


id: PBO:0076633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transducin beta like 1 Y-linked","termid":"PBO:0076633"}


id: MOD:00024
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to L-proline.","definition_xrefs":["PubMed:6692818","PubMed:8547259","ChEBI:30017","DeltaMass:0","RESID:AA0015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-proline residue","synonyms":[{"name":"(2S)-2-pyrrolidinecarboxylic acid","type":"exact"},{"name":"L-proline","type":"exact"},{"name":"Pro","type":"exact"},{"name":"pyrrolidine-2-carboxylic acid","type":"exact"}],"termid":"MOD:00024"}


id: PBO:0090800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex cyclin Mcs2","termid":"PBO:0090800"}


id: PBO:0084504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific recombinase required for double-strand break repair; also required for pairing between homologous chromosomes and for the normal morphogenesis of synaptonemal complex; binds ssDNA and dsDNA, forms helical filaments; potent inhibitor of the ATPase activity of  Srs2p helicase, blocking its ssDNA translocating motor activity and inhibiting its antirecombinase activity; stimulated by Rdh54p; homolog of Rad51p and the bacterial RecA protein","termid":"PBO:0084504"}


id: GO:2001191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gamma-delta T cell activation involved in immune response.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell activation","termid":"GO:0046643"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"gamma-delta T cell activation involved in immune response","termid":"GO:0002290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of gamma-delta T cell activation involved in immune response","synonyms":[{"name":"regulation of gamma-delta T cell activation during immune response","type":"related"},{"name":"regulation of gamma-delta T lymphocyte activation during immune response","type":"related"},{"name":"regulation of gamma-delta T-cell activation during immune response","type":"related"},{"name":"regulation of gamma-delta T-lymphocyte activation during immune response","type":"related"}],"termid":"GO:2001191"}


id: GO:0006441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete binding to mRNA cap (obsolete GO:0006441)","synonyms":[{"name":"binding to mRNA cap","type":"exact"}],"termid":"GO:0006441"}


id: PBO:0068311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF13 pseudogene 1","termid":"PBO:0068311"}


id: PBO:0051795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQCJ-SCHIP1 readthrough antisense RNA 1","termid":"PBO:0051795"}


id: PBO:0068691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 72, pseudogene","termid":"PBO:0068691"}


id: PBO:0089239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle subunit","termid":"PBO:0089239"}


id: RO:0002178
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between an arterial structure and another structure, where the arterial structure acts as a conduit channeling fluid, substance or energy.","direct_ancestors":[{"relation_name":"is_a","term_name":"connected_to","termid":"RO:0002170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supplies","termid":"RO:0002178"}


id: GO:0015736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which hexuronate is transported across a lipid bilayer, from one side of a membrane to the other. A hexuronate is any monocarboxylic acid derived from a hexose by oxidation of C-6.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uronic acid transmembrane transport","termid":"GO:0015735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"hexuronate transmembrane transport","synonyms":[{"name":"hexuronate transport","type":"related"}],"termid":"GO:0015736"}


id: GO:0034791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: isobutylamine + NADPH + O2 = isobutylhydroxylamine + NADP+ + H2O.","definition_xrefs":["UM-BBD_reactionID:r1053"],"gene_count":0,"genotype_count":0,"name":"obsolete isobutylamine N-hydroxylase activity (obsolete GO:0034791)","termid":"GO:0034791"}


id: MONDO:0018756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"euthyroid Graves orbitopathy","secondary_identifiers":["GARD:21940","DOID:0081120","UMLS:C5680004","Orphanet:466682","MEDGEN:1803712"],"synonyms":[{"name":"euthyroid Graves ophthalmopathy","type":"exact"}],"termid":"MONDO:0018756","xrefs":{"Monarch":{"xref_id":"0018756"}}}


id: GO:1904729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intestinal lipid absorption.","definition_xrefs":["GO_REF:0000058","PMID:18768481","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intestinal absorption","termid":"GO:1904478"},{"relation_name":"regulates","term_name":"intestinal lipid absorption","termid":"GO:0098856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intestinal lipid absorption","termid":"GO:1904729"}


id: PR:Q92357
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cfr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell fusion protein cfr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.12","synonyms":[{"name":"CHS5-related protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cfr1","type":"exact"}],"termid":"PR:Q92357"}


id: MONDO:0001405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermatophytosis involving the stratum corneum of the skin of the groin and perianal area.","definition_xrefs":["NCIT:C34535"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatophytosis","termid":"MONDO:0004678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dermatophytosis of groin and perianal area","secondary_identifiers":["ICD9:110.3","SCTID:399029005","UMLS:C0011638","DOID:11917","MEDGEN:3769"],"synonyms":[{"name":"Dhobie itch","type":"exact"},{"name":"dermatophytosis of groin & perianal area","type":"exact"},{"name":"dermatophytosis of groin and perianal area","type":"exact"},{"name":"tinea cruris","type":"related"}],"termid":"MONDO:0001405","xrefs":{"Monarch":{"xref_id":"0001405"}}}


id: PBO:0083765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential membrane protein localized at nuclear envelope and SPBs; required for insertion of the newly duplicated spindle pole body into the nuclear envelope; potentially phosphorylated by Cdc28p; MPS2 has a paralog, CSM4, that arose from the whole genome duplication","termid":"PBO:0083765"}


id: MONDO:0001842
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare morphologic variant of uterine corpus leiomyoma. Macroscopically, it is characterized by large, fungating, and multinodular neoplasm masses arising from the uterine corpus, and extending into the broad ligament or the peritoneal cavity. Microscopically, it shows neoplastic smooth muscle cells infiltrating the myometrium. The neoplastic cells are arranged in a micronodular pattern. Hydropic changes and increased vascularity are also present.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine corpus leiomyoma","termid":"MONDO:0007886"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine corpus dissecting leiomyoma","secondary_identifiers":["UMLS:C1519847","NCIT:C40172","DOID:13953","MEDGEN:275552"],"synonyms":[{"name":"Cotyledonoid dissecting leiomyoma","type":"exact"},{"name":"Sternberg tumor","type":"exact"},{"name":"Sternberg tumour","type":"exact"}],"termid":"MONDO:0001842","xrefs":{"Monarch":{"xref_id":"0001842"}}}


id: MONDO:0012939
data:
  {"annotated_genes":["SJAG_02046"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86260],"is_not":false,"summary":null,"term":"MONDO:0012939"}]},"cv_name":"mondo","definition":"Any Diamond-Blackfan anemia in which the cause of the disease is a mutation in the RPS7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Diamond-Blackfan anemia","termid":"MONDO:0015253"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02046":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"Diamond-Blackfan anemia 8","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111881","MEDGEN:390817","NCIT:C176917","GARD:15570","OMIM:612563","UMLS:C2675511","MESH:C567253"],"synonyms":[{"name":"DBA8","type":"related"},{"name":"Diamond-Blackfan Anaemia type 8","type":"exact"},{"name":"Diamond-Blackfan Anemia type 8","type":"exact"},{"name":"Diamond-Blackfan anaemia caused by mutation in RPS7","type":"exact"},{"name":"Diamond-Blackfan anemia 8","type":"exact"},{"name":"Diamond-Blackfan anemia caused by mutation in RPS7","type":"exact"},{"name":"RPS7 Diamond-Blackfan anaemia","type":"exact"},{"name":"RPS7 Diamond-Blackfan anemia","type":"exact"}],"termid":"MONDO:0012939","terms_by_termid":{"MONDO:0012939":null},"xrefs":{"Monarch":{"xref_id":"0012939"}}}


id: MONDO:0017906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Amyloidosis cutis dyschromia is a rare primary cutaneous amyloidosis characterized by macular or reticulate hyperpigmentation with symmetrically distributed guttate hypo- and hyperpigmented lesions which progress gradually over the years to involve almost the entire body (with relative sparing of the face, hands, feet and neck). Patients are usually asymptomatic, however mild pruritus may be associated. Amyloid deposition in the papillary dermis is observed on skin biopsy. Systemic amyloidosis is not present and association with generalized morphea, atypical Parkinsonism, spasticity, motor weakness or colon carcinoma is rare.","definition_xrefs":["Orphanet:319635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary cutaneous amyloidosis","termid":"MONDO:0015301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"amyloidosis cutis dyschromia","secondary_identifiers":["ICD10EXP:E85.4+","GARD:17466","UMLS:C4554601","ICD10EXP:L99.0*","MEDGEN:1641859","DOID:0080932"],"synonyms":[{"name":"amyloidosis cutis dyschromica","type":"exact"}],"termid":"MONDO:0017906","xrefs":{"Monarch":{"xref_id":"0017906"}}}


id: GO:0021508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a ventral region of glial cells in the neural tube that provides inductive signals for the specification of neuronal cell types. The floor plate is evident at the ventral midline by the neural fold stage.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:dph","PMID:11262869","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"ventral midline development","termid":"GO:0007418"},{"relation_name":"part_of","term_name":"floor plate morphogenesis","termid":"GO:0033505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floor plate formation","termid":"GO:0021508"}


id: GO:0045517
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-20 receptor.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"interleukin-20 receptor binding","synonyms":[{"name":"IL-20","type":"narrow"},{"name":"interleukin-20 receptor ligand","type":"narrow"}],"termid":"GO:0045517"}


id: MONDO:0013753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Charcot-Marie-Tooth disease in which the cause of the disease is a mutation in the LRSAM1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease axonal type 2P","secondary_identifiers":["OMIM:608591","SCTID:719511005","DOID:0110169","MEDGEN:482427","Orphanet:99941","Orphanet:300319","OMIM:614436","UMLS:C3280797","GARD:12435"],"synonyms":[{"name":"CMT 2G","type":"related"},{"name":"CMT2G","type":"related"},{"name":"CMT2P","type":"exact"},{"name":"Charcot Marie Tooth disease type 2G","type":"related"},{"name":"Charcot-Marie-Tooth disease caused by mutation in LRSAM1","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 2G","type":"related"},{"name":"Charcot-Marie-Tooth disease type 2P","type":"exact"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2G","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2G, formerly","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2P","type":"exact"},{"name":"Charcot-Marie-Tooth disease, axonal, with vocal cord paresis, autosomal recessive","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 4A, axonal form","type":"related"},{"name":"Charcot-Marie-Tooth neuropathy type 2P","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 2G","type":"related"},{"name":"Charcot-Marie-Tooth neuropathy, type 2P","type":"exact"},{"name":"Charcot-Marie-Toothe disease, axonal, type 2P","type":"exact"},{"name":"LRSAM1 Charcot-Marie-Tooth disease","type":"exact"},{"name":"autosomal dominant Charcot-Marie-Tooth disease type 2G","type":"exact"}],"termid":"MONDO:0013753","xrefs":{"Monarch":{"xref_id":"0013753"}}}


id: GO:0047757
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chondroitin D-glucuronate = dermatan L-iduronate.","definition_xrefs":["MetaCyc:CHONDROITIN-GLUCURONATE-5-EPIMERASE-RXN","EC:5.1.3.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"chondroitin-glucuronate 5-epimerase activity","secondary_identifiers":["Reactome:R-HSA-2022052","RHEA:21084"],"synonyms":[{"name":"chondroitin D-glucuronosyl 5-epimerase activity","type":"related"},{"name":"chondroitin-D-glucuronate 5-epimerase activity","type":"related"},{"name":"dermatan-sulfate 5-epimerase activity","type":"related"},{"name":"polyglucuronate 5-epimerase activity","type":"related"},{"name":"urunosyl C-5 epimerase activity","type":"related"}],"termid":"GO:0047757"}


id: MONDO:0012055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Larsen-like osseous dysplasia-short stature syndrome is a rare primary bone dysplasia characterized by a Larsen-like phenotype including multiple, congenital, large joint dislocations, craniofacial abnormalities (i.e. macrocephaly, flat occiput, prominent forehead, hypertelorism, low-set, malformed ears, flat nose, cleft palate), spinal abnormalities, cylindrical fingers, and talipes equinovarus, as well as growth retardation (resulting in short stature) and delayed bone age. Other reported clinical manifestations include severe developmental delay, hypotonia, clinodactyly, congenital heart defect and renal dysplasia.","definition_xrefs":["Orphanet:2370"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with multiple joint dislocations (obsolete MONDO:0019700)","termid":"MONDO:0019700"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Larsen-like osseous dysplasia-short stature syndrome","secondary_identifiers":["OMIM:608545","UMLS:C1837884","MEDGEN:325280","GARD:16595","MESH:C563914"],"synonyms":[{"name":"Larsen-like syndrome","type":"related"},{"name":"Larsen-like syndrome, isolated cases","type":"exact"},{"name":"Lrsl","type":"related"}],"termid":"MONDO:0012055","xrefs":{"Monarch":{"xref_id":"0012055"}}}


id: MONDO:1010262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycystic kidney disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"renal disease, non-human animal","termid":"MONDO:1011909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic kidney disease, non-human animal","secondary_identifiers":["OMIA:000807"],"termid":"MONDO:1010262","xrefs":{"Monarch":{"xref_id":"1010262"}}}


id: PBO:0066522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RGMB antisense RNA 1","termid":"PBO:0066522"}


id: GO:0160204
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together two mitochondrion membranes via membrane lipid binding or by interacting with a mitochondrial outer membrane protein, to establish or maintain the localization of the mitochondrion.","definition_xrefs":["PMID:38843396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0030674"],"is_obsolete":false,"name":"mitochondrion-mitochondrion outer membrane tether activity","synonyms":[{"name":"mitochondrion membrane tether activity","type":"related"},{"name":"mitochondrion outer membrane tether activity","type":"related"}],"termid":"GO:0160204"}


id: PBO:0090229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aconitate hydratase Aco1","termid":"PBO:0090229"}


id: GO:1902102
data:
  {"annotated_genes":["SJAG_01837","SJAG_04259","SJAG_01515","SJAG_03327","SJAG_00145","SJAG_04126","SJAG_01330","SJAG_01082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105807,113993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[101295,116164,105808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[98195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902103"},{"annotations":[113280],"is_not":false,"rel_names":["regulates","is_a","positively_regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[94642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905191"},{"annotations":[100834],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metaphase/anaphase transition of meiotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of meiotic cell cycle phase transition","termid":"GO:1901993"},{"relation_name":"is_a","term_name":"regulation of metaphase/anaphase transition of cell cycle","termid":"GO:1902099"},{"relation_name":"is_a","term_name":"regulation of meiotic chromosome separation","termid":"GO:1905132"},{"relation_name":"regulates","term_name":"metaphase/anaphase transition of meiotic cell cycle","termid":"GO:0044785"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_01082":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01837":null,"SJAG_03327":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of metaphase/anaphase transition of meiotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of meiotic metaphase/anaphase transition","type":"exact"}],"termid":"GO:1902102","terms_by_termid":{"GO:0033316":null,"GO:1902103":null,"GO:1905191":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: PBO:0064032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 66","termid":"PBO:0064032"}


id: PATO:0000221
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000221 urination (obsolete PATO:0000221)","termid":"PATO:0000221"}


id: MONDO:0013573
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cranioectodermal dysplasia in which the cause of the disease is a mutation in the IFT43 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranioectodermal dysplasia","termid":"MONDO:0009032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005497","MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"cranioectodermal dysplasia 3","secondary_identifiers":["DOID:0080805","MEDGEN:481437","GARD:15757","UMLS:C3279807","OMIM:614099"],"synonyms":[{"name":"CED3","type":"related"},{"name":"CRANIOECTODERMAL dysplasia 3","type":"related"},{"name":"Cranioectodermal dysplasia type 3","type":"exact"},{"name":"IFT43 cranioectodermal dysplasia","type":"exact"},{"name":"cranioectodermal dysplasia 3","type":"exact"},{"name":"cranioectodermal dysplasia caused by mutation in IFT43","type":"exact"}],"termid":"MONDO:0013573","xrefs":{"Monarch":{"xref_id":"0013573"}}}


id: GO:0022869
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + lactose(out) = protein histidine + lactose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"lactose transmembrane transporter activity","termid":"GO:0015155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003824","GO:0022857","GO:0005215","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity","synonyms":[{"name":"lactose PTS transporter activity","type":"exact"}],"termid":"GO:0022869"}


id: GO:0032037
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a heavy chain of a myosin I complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin I binding","termid":"GO:0017024"},{"relation_name":"is_a","term_name":"myosin heavy chain binding","termid":"GO:0032036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0008092","GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"myosin I heavy chain binding","termid":"GO:0032037"}


id: GO:1902249
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to IMP, inosine monophosphate.","definition_xrefs":["PMID:4314233","GOC:TermGenie","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide binding","termid":"GO:0032555"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"IMP binding","termid":"GO:1902249"}


id: MONDO:0018049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Kaposi sarcoma (obsolete MONDO:0018049)","termid":"MONDO:0018049","xrefs":{"Monarch":{"xref_id":"0018049"}}}


id: PBO:0113301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in calcium-induced activation of calcineurin; homologous to proteins in Candida and Cryptococcus; YCX1 is not an essential protein","termid":"PBO:0113301"}


id: GO:0030791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + arsenite = S-adenosyl-L-homocysteine + methylarsonate.","definition_xrefs":["EC:2.1.1.137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"arsenite methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-5696220","UM-BBD_reactionID:r0805","Reactome:R-HSA-5696213"],"synonyms":[{"name":"S-adenosyl-L-methionine:arsenic(III) methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:arsenite As-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:methylarsonite As-methyltransferase activity","type":"related"}],"termid":"GO:0030791"}


id: FYPO:0004673
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, is elongated, contains more than one septum, and contains a nucleus that is broken into small fragments.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated multinucleate vegetative cell","termid":"FYPO:0001493"},{"relation_name":"is_a","term_name":"fragmented nucleus","termid":"FYPO:0006661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0002403"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0002403","FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0000005","FYPO:0001320","FYPO:0005447","FYPO:0000032"],"is_obsolete":false,"name":"inviable elongated multiseptate vegetative cell with fragmented nucleus","synonyms":[{"name":"elongated inviable multiseptate cell with fragmented nucleus","type":"exact"},{"name":"inviable elongated multiseptate cell with fragmented nucleus during vegetative growth","type":"exact"},{"name":"inviable elongated multiseptate vegetative cell with fragmented DNA","type":"related"},{"name":"inviable elongated multiseptate vegetative cell with fragmented nucleus during mitotic cell cycle","type":"related"},{"name":"lethal; elongated multiseptate vegetative cell with fragmented nucleus","type":"exact"}],"termid":"FYPO:0004673"}


id: GO:0009176
data:
  {"annotated_genes":["SJAG_04487","SJAG_03771","SJAG_04627"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88853,107866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[107867,98491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyrimidine deoxynucleoside monophosphate, a compound consisting of a pyrimidine base linked to a deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside monophosphate metabolic process","termid":"GO:0009129"},{"relation_name":"is_a","term_name":"deoxyribonucleoside monophosphate metabolic process","termid":"GO:0009162"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03771":null,"SJAG_04487":null,"SJAG_04627":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside monophosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine deoxyribonucleoside monophosphate metabolism","type":"exact"}],"termid":"GO:0009176","terms_by_termid":{"GO:0006226":null,"GO:0006231":null}}


id: PBO:0038585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA acyltransferase 2","termid":"PBO:0038585"}


id: PBO:0059799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 25","termid":"PBO:0059799"}


id: GO:0033783
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: 25-hydroxycholesterol + O2 + reduced [NADPH--hemoprotein reductase] = 7alpha,25-dihydroxycholesterol + H+ + H2O + oxidized [NADPH--hemoprotein reductase]. Also converts (25R)-cholest-5-ene-3beta,26-diol to (25R)-cholest-5-en-3beta,7alpha,26-triol.","definition_xrefs":["EC:1.14.14.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid 7-alpha-hydroxylase activity","termid":"GO:0008387"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"25-hydroxycholesterol 7-alpha-hydroxylase activity","synonyms":[{"name":"25-hydroxycholesterol 7alpha-monooxygenase activity","type":"related"},{"name":"CYP7B1","type":"related"},{"name":"CYP7B1 oxysterol 7alpha-hydroxylase activity","type":"related"},{"name":"cholest-5-ene-3beta,25-diol,NADPH:oxygen oxidoreductase (7alpha-hydroxylating) activity","type":"related"}],"termid":"GO:0033783"}


id: PBO:0074068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 43","termid":"PBO:0074068"}


id: MONDO:0011398
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dystrophic epidermolysis bullosa pruriginosa is a rare subtype of dystrophic epidermolysis bullosa (DEB) characterized by generalized or localized skin lesions associated with severe, if not intractable, pruritus.","definition_xrefs":["Orphanet:89843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa dystrophica","termid":"MONDO:0006543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dystrophic epidermolysis bullosa pruriginosa","secondary_identifiers":["UMLS:C1275114","GARD:16779","ICD9:757.39","MEDGEN:266151","OMIM:604129","SCTID:403810008","MESH:C563192"],"synonyms":[{"name":"DEB, pruriginosa","type":"exact"},{"name":"DEB-Pr","type":"exact"},{"name":"Deb, pruriginosa","type":"related"},{"name":"dystrophic epidermolysis bullosa pruriginosa","type":"exact"},{"name":"epidermolysis bullosa pruriginosa","type":"related"},{"name":"pruriginous dystrophic epidermolysis bullosa","type":"exact"}],"termid":"MONDO:0011398","xrefs":{"Monarch":{"xref_id":"0011398"}}}


id: PR:O74472
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug33 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 33 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.10","synonyms":[{"name":"Spom972h-mug33","type":"exact"}],"termid":"PR:O74472"}


id: MONDO:0020688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Reduced blood flow to the spinal cord which is supplied by the anterior spinal artery and the paired posterior spinal arteries. This condition may be associated with arteriosclerosis, trauma, emboli, diseases of the aorta, and other disorders. Prolonged ischemia may lead to infarction of spinal cord tissue.","definition_xrefs":["MESH:D020760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stroke disorder","termid":"MONDO:0005098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal cord ischemia","secondary_identifiers":["UMLS:C0752130","EFO:1001426","MEDGEN:155706"],"synonyms":[{"name":"cord Ischemias, spinal","type":"related"},{"name":"cord ischemia, spinal","type":"related"},{"name":"experimental spinal cord ischemia","type":"related"},{"name":"ischaemic myelopathies","type":"related"},{"name":"ischaemic myelopathy","type":"related"},{"name":"ischemia, spinal cord","type":"related"},{"name":"ischemias, spinal cord","type":"related"},{"name":"ischemic myelopathies","type":"related"},{"name":"ischemic myelopathy","type":"related"},{"name":"myelopathies, ischaemic","type":"related"},{"name":"myelopathies, ischemic","type":"related"},{"name":"myelopathy, ischaemic","type":"related"},{"name":"myelopathy, ischemic","type":"related"},{"name":"spinal cord Ischemias","type":"related"},{"name":"spinal cord ischemia, experimental","type":"related"}],"termid":"MONDO:0020688","xrefs":{"Monarch":{"xref_id":"0020688"}}}


id: MONDO:0018138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ocular albinism with congenital sensorineural hearing loss (obsolete MONDO:0018138)","secondary_identifiers":["DOID:0090100","Orphanet:352740","OMIM:103470"],"synonyms":[{"name":"WS2-OA","type":"exact"},{"name":"Waardenburg syndrome type 2 with ocular albinism","type":"exact"},{"name":"Waardenburg syndrome, type 2, with ocular albinism, autosomal recessive","type":"related"},{"name":"Waardenburg syndrome/albinism, digenic","type":"exact"},{"name":"Waardenburg syndrome/ocular albinism, digenic","type":"exact"},{"name":"albinism, ocular, with sensorineural deafness","type":"narrow"},{"name":"autosomal recessive Waardenburg syndrome type 2 with ocular albinism","type":"exact"},{"name":"digenic Waardenburg syndrome/albinism","type":"exact"},{"name":"digenic Waardenburg syndrome/ocular albinism","type":"exact"},{"name":"ocular albinism with congenital sensorineural deafness","type":"narrow"},{"name":"ocular albinism with sensorineural deafness","type":"narrow"}],"termid":"MONDO:0018138","xrefs":{"Monarch":{"xref_id":"0018138"}}}


id: PBO:0064688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 24","termid":"PBO:0064688"}


id: GO:1990062
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex first characterized in human and comprised of a R2TP module (R2TP complex), a prefoldin-like module (containing both prefoldin-like proteins and canonical prefoldins), WD40 repeat protein Monad/WDR92 and DNA-dependent RNA polymerase subunit RPB5. This complex might have chaperone activity.","definition_xrefs":["PMID:21925213","PMID:22418846","GOC:pr","PMID:20453924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RPAP3/R2TP/prefoldin-like complex","synonyms":[{"name":"R2TP/prefoldin-like complex","type":"related"}],"termid":"GO:1990062"}


id: MONDO:0009019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare subtype of posterior corneal dystrophy characterized by a diffuse ground-glass appearance of the corneas and marked corneal thickening from birth with nystagmus, and blurred vision.","definition_xrefs":["Orphanet:293603"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal endothelial dystrophy","termid":"MONDO:0000766"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"posterior corneal dystrophy","termid":"MONDO:0020214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"congenital hereditary endothelial dystrophy of cornea","secondary_identifiers":["UMLS:C1857569","MESH:C536439","OMIM:217700","GARD:6196","MEDGEN:387857","DOID:0060649"],"synonyms":[{"name":"CHED","type":"exact"},{"name":"CHED2","type":"exact"},{"name":"CHED2, formerly","type":"related"},{"name":"CHEDII","type":"exact"},{"name":"autosomal recessive CHED","type":"exact"},{"name":"autosomal recessive congenital hereditary endothelial dystrophy","type":"exact"},{"name":"congenital hereditary endothelial dystrophy of cornea","type":"exact"},{"name":"congenital hereditary endothelial dystrophy of the cornea","type":"related"},{"name":"congenital hereditary endothelial dystrophy type 2","type":"exact"},{"name":"congenital hereditary endothelial dystrophy type II","type":"related"},{"name":"corneal dystrophy, congenital hereditary endothelial","type":"related"},{"name":"corneal endothelial dystrophy","type":"related"},{"name":"corneal endothelial dystrophy 2","type":"related"},{"name":"corneal endothelial dystrophy 2, autosomal recessive","type":"related"},{"name":"corneal endothelial dystrophy 2, autosomal recessive, formerly","type":"related"},{"name":"corneal endothelial dystrophy type 2","type":"related"},{"name":"corneal endothelial dystrophy, autosomal recessive","type":"exact"},{"name":"infantile hereditary endothelial dystrophy","type":"exact"}],"termid":"MONDO:0009019","xrefs":{"Monarch":{"xref_id":"0009019"}}}


id: PBO:0008211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr5 protein","termid":"PBO:0008211"}


id: FYPO:0006321
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at stalled replication forks is decreased.","definition_xrefs":["PomBase:mah","PMID:29215009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to chromatin at stalled replication fork","synonyms":[{"name":"decreased protein localisation to chromatin at stalled replication fork during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at stalled replication fork during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to chromatin at stalled replication fork during vegetative growth","type":"exact"}],"termid":"FYPO:0006321"}


id: PR:Q9UT14
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9E9.17c gene.","definition_xrefs":["UniProtKB:Q9UT14","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C9E9.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.17c","synonyms":[{"name":"Spom972h-SPAC9E9.17c","type":"exact"}],"termid":"PR:Q9UT14"}


id: GO:0003292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an endocardial cushion cell becomes a cell of a cardiac septum.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiocyte differentiation","termid":"GO:0035051"},{"relation_name":"part_of","term_name":"cardiac septum development","termid":"GO:0003279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac septum cell differentiation","termid":"GO:0003292"}


id: PBO:0078798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 16-5","termid":"PBO:0078798"}


id: PBO:0113008
data:
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id: MONDO:0008829
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id: PBO:0065716
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id: PBO:0049718
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id: FYPO:0000541
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id: PBO:0040275
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id: PBO:0004024
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id: PBO:0056664
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id: PBO:0059840
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id: PBO:0064549
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id: GO:0042193
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id: GO:0061410
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id: GO:1903046
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id: PBO:0064322
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id: PBO:0068829
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id: MONDO:0008117
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id: PBO:0044032
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id: GO:0016842
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id: PBO:0041119
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id: SO:0001367
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id: PBO:0116245
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id: MONDO:0020077
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id: PBO:0065933
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id: PBO:0057289
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id: PBO:0082147
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id: MONDO:0014459
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id: PR:O74883
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase III subunit RPC5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12069:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit rpc5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.13","secondary_identifiers":["UniProtKB:O74883"],"synonyms":[{"name":"RNA polymerase III subunit C37 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC330.13","type":"related"},{"name":"Spom972h-POLR3E","type":"exact"}],"termid":"PR:O74883"}


id: MONDO:0009257
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id: PBO:0030101
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id: GO:0039593
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id: PBO:0070630
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id: PBO:0058744
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id: PBO:0085338
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id: PATO:0002459
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id: GO:1903856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cytokinin dehydrogenase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:25535363"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cytokinin dehydrogenase activity (obsolete GO:1903856)","synonyms":[{"name":"regulation of 6-N-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"regulation of N6-dimethylallyladenine:(acceptor) oxidoreductase activity","type":"exact"},{"name":"regulation of N6-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"regulation of cytokinin oxidase activity","type":"related"}],"termid":"GO:1903856"}


id: PBO:0074530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA D","termid":"PBO:0074530"}


id: MONDO:1011410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vitamin-K-Dependent blood coagulation factors deficiency that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin-K-dependent blood coagulation factors deficiency, non-human animal","secondary_identifiers":["OMIA:001054"],"termid":"MONDO:1011410","xrefs":{"Monarch":{"xref_id":"1011410"}}}


id: GO:0007123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete bud scar accumulation (obsolete GO:0007123)","synonyms":[{"name":"bud scar accumulation","type":"exact"}],"termid":"GO:0007123"}


id: GO:0045274
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A part of the respiratory chain located in the plasma membrane, containing the four polypeptide subunits of succinate dehydrogenase, flavin-adenine dinucleotide and iron-sulfur. Catalyzes the oxidation of succinate by ubiquinone. Connects the TCA cycle with the respiratory chain. Examples of this component are found in bacterial species.","definition_xrefs":["GOC:mtg_sensu","ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane respiratory chain complex II (obsolete GO:0045274)","synonyms":[{"name":"respiratory chain complex II","type":"broad"}],"termid":"GO:0045274"}


id: MOD:00461
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a nitrite (NO2) group for a hydrogen atom.","definition_xrefs":["PubMed:8839040","DeltaMass:0","Unimod:354","PubMed:9252331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrosylation","synonyms":[{"name":"Nitro","type":"related"},{"name":"Nitro (NO2)","type":"exact"},{"name":"Oxidation to nitro","type":"related"}],"termid":"MOD:00461"}


id: GO:0018757
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: deisopropylhydroxyatrazine + H2O = NH3 + 2,4-dihydroxy-6-(N'-ethyl)amino-1,3,5-triazine.","definition_xrefs":["UM-BBD_reactionID:r0121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"deisopropylhydroxyatrazine aminohydrolase activity","secondary_identifiers":["KEGG_REACTION:R05574"],"termid":"GO:0018757"}


id: MONDO:0006189
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma with eccrine differentiation arising from the sweat glands. It may arise de novo or as a malignant transformation of a pre-existing poroma. It usually grows in the legs, buttocks, feet, and trunk and usually presents as an ulcerative plaque. It is characterized by the presence of intraepidermal and dermal nests of malignant epithelial cells. It may recur after excision and metastasize to the lymph nodes and less frequently to distal anatomic sites.","definition_xrefs":["NCIT:C5560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eccrine carcinoma","termid":"MONDO:0024240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"eccrine porocarcinoma","secondary_identifiers":["ONCOTREE:POCA","EFO:1000229","MEDGEN:266098","MESH:D057090","UMLS:C1266065","ICDO:8409/3","DOID:7566","SCTID:254708001"],"synonyms":[{"name":"eccrine porocarcinoma","type":"exact"},{"name":"eccrine porocarcinoma of skin","type":"related"},{"name":"epidermotropic eccrine carcinoma","type":"exact"},{"name":"malignant eccrine poroma","type":"exact"},{"name":"porocarcinoma","type":"exact"},{"name":"porocarcinoma/spiroadenocarcinoma","type":"related"}],"termid":"MONDO:0006189","xrefs":{"Monarch":{"xref_id":"0006189"}}}


id: PBO:0070248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 190 pseudogene","termid":"PBO:0070248"}


id: PR:Q9C100
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein O-mannosyl-transferase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate-mannose--protein mannosyltransferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.09","secondary_identifiers":["UniProtKB:Q9C100"],"synonyms":[{"name":"Spom972h-POMT2","type":"exact"}],"termid":"PR:Q9C100"}


id: MONDO:0023419
data:
  {"annotated_genes":["SJAG_01903","SJAG_02235"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009400"},{"annotations":[86183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009401"}]},"cv_name":"mondo","definition":"Hyperprolinemia is when there isan excess of a particular protein building block (amino acid), called proline, in the blood. This condition generally occurs when proline is not broken down properly by the body. There are two inherited forms:hyperprolinemia type1 and hyperprolinemia type 2. People with hyperprolinemia type I often do not show any symptoms, although they have proline levels in their blood between 3 and 10 times the normal level. Less commonly, affected individuals can experience seizures, intellectual disability, or other neurological or psychiatric problems. Hyperprolinemia is caused by mutations in the PRODH gene and is inherited in an autosomal recessive pattern.","definition_xrefs":["GARD:0002847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of proline metabolism","termid":"MONDO:0017355"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01903":null,"SJAG_02235":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"hyperprolinemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:75690","UMLS:C0268528","GARD:2847","NANDO:2200471","ICD9:270.8","SCTID:59655002","DOID:0080541"],"synonyms":[{"name":"hyperprolinemia type 1","type":"related"},{"name":"proline hydrogenase deficiency","type":"related"},{"name":"proline oxidase deficiency","type":"related"}],"termid":"MONDO:0023419","terms_by_termid":{"MONDO:0009400":null,"MONDO:0009401":null},"xrefs":{"Monarch":{"xref_id":"0023419"}}}


id: MONDO:0003836
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, hormonally functioning or non-functioning pituitary gland adenocarcinoma that produces thyrotropin.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TSH producing pituitary tumor","termid":"MONDO:0003837"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant thyroid stimulating hormone producing neoplasm of pituitary gland","secondary_identifiers":["MEDGEN:277341","NCIT:C5965","UMLS:C1334627","DOID:6274"],"synonyms":[{"name":"TSH producing pituitary gland carcinoma","type":"exact"},{"name":"TSH-producing pituitary gland carcinoma","type":"exact"},{"name":"malignant TSH producing neoplasm of pituitary","type":"exact"},{"name":"malignant TSH producing neoplasm of pituitary gland","type":"exact"},{"name":"malignant TSH producing neoplasm of the pituitary","type":"exact"},{"name":"malignant TSH producing neoplasm of the pituitary gland","type":"exact"},{"name":"malignant TSH producing pituitary gland neoplasm","type":"exact"},{"name":"malignant TSH producing pituitary gland tumor","type":"exact"},{"name":"malignant TSH producing pituitary gland tumour","type":"exact"},{"name":"malignant TSH producing pituitary neoplasm","type":"exact"},{"name":"malignant TSH producing pituitary tumor","type":"exact"},{"name":"malignant TSH producing pituitary tumour","type":"exact"},{"name":"malignant TSH producing tumor of pituitary","type":"exact"},{"name":"malignant TSH producing tumor of pituitary gland","type":"exact"},{"name":"malignant TSH producing tumor of the pituitary","type":"exact"},{"name":"malignant TSH producing tumor of the pituitary gland","type":"exact"},{"name":"malignant TSH producing tumour of pituitary","type":"exact"},{"name":"malignant TSH producing tumour of pituitary gland","type":"exact"},{"name":"malignant TSH producing tumour of the pituitary","type":"exact"},{"name":"malignant TSH producing tumour of the pituitary gland","type":"exact"},{"name":"malignant TSH secreting neoplasm of pituitary","type":"exact"},{"name":"malignant TSH secreting neoplasm of pituitary gland","type":"exact"},{"name":"malignant TSH secreting neoplasm of the pituitary","type":"exact"},{"name":"malignant TSH secreting neoplasm of the pituitary gland","type":"exact"},{"name":"malignant TSH secreting pituitary gland neoplasm","type":"exact"},{"name":"malignant TSH secreting pituitary gland tumor","type":"exact"},{"name":"malignant TSH secreting pituitary gland tumour","type":"exact"},{"name":"malignant TSH secreting pituitary neoplasm","type":"exact"},{"name":"malignant TSH secreting pituitary tumor","type":"exact"},{"name":"malignant TSH secreting pituitary tumour","type":"exact"},{"name":"malignant TSH secreting tumor of pituitary","type":"exact"},{"name":"malignant TSH secreting tumor of pituitary gland","type":"exact"},{"name":"malignant TSH secreting tumor of the pituitary","type":"exact"},{"name":"malignant TSH secreting tumor of the pituitary gland","type":"exact"},{"name":"malignant TSH secreting tumour of pituitary","type":"exact"},{"name":"malignant TSH secreting tumour of pituitary gland","type":"exact"},{"name":"malignant TSH secreting tumour of the pituitary","type":"exact"},{"name":"malignant TSH secreting tumour of the pituitary gland","type":"exact"},{"name":"malignant pituitary gland thyrotropinoma","type":"exact"},{"name":"malignant pituitary thyrotropinoma","type":"exact"},{"name":"malignant thyroid stimulating hormone producing neoplasm of pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone producing neoplasm of pituitary gland","type":"exact"},{"name":"malignant thyroid stimulating hormone producing neoplasm of the pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone producing neoplasm of the pituitary gland","type":"exact"},{"name":"malignant thyroid stimulating hormone producing pituitary gland neoplasm","type":"exact"},{"name":"malignant thyroid stimulating hormone producing pituitary gland tumor","type":"exact"},{"name":"malignant thyroid stimulating hormone producing pituitary gland tumour","type":"exact"},{"name":"malignant thyroid stimulating hormone producing pituitary neoplasm","type":"exact"},{"name":"malignant thyroid stimulating hormone producing pituitary tumor","type":"exact"},{"name":"malignant thyroid stimulating hormone producing pituitary tumour","type":"exact"},{"name":"malignant thyroid stimulating hormone producing tumor","type":"exact"},{"name":"malignant thyroid stimulating hormone producing tumor of pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone producing tumor of pituitary gland","type":"exact"},{"name":"malignant thyroid stimulating hormone producing tumor of the pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone producing tumor of the pituitary gland","type":"exact"},{"name":"malignant thyroid stimulating hormone producing tumour","type":"exact"},{"name":"malignant thyroid stimulating hormone producing tumour of pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone producing tumour of pituitary gland","type":"exact"},{"name":"malignant thyroid stimulating hormone producing tumour of the pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone producing tumour of the pituitary gland","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting neoplasm of pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting neoplasm of pituitary gland","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting neoplasm of the pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting neoplasm of the pituitary gland","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting pituitary gland neoplasm","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting pituitary gland tumor","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting pituitary gland tumour","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting pituitary neoplasm","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting pituitary tumor","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting pituitary tumour","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting tumor of pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting tumor of pituitary gland","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting tumor of the pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting tumor of the pituitary gland","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting tumour of pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting tumour of pituitary gland","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting tumour of the pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting tumour of the pituitary gland","type":"exact"},{"name":"malignant thyrotropinoma","type":"exact"},{"name":"malignant thyrotropinoma of pituitary","type":"exact"},{"name":"malignant thyrotropinoma of pituitary gland","type":"exact"},{"name":"malignant thyrotropinoma of the pituitary","type":"exact"},{"name":"malignant thyrotropinoma of the pituitary gland","type":"exact"},{"name":"thyrotropin producing pituitary gland carcinoma","type":"exact"}],"termid":"MONDO:0003836","xrefs":{"Monarch":{"xref_id":"0003836"}}}


id: PBO:0002250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body protein Ppc89","termid":"PBO:0002250"}


id: PR:Q96WW6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An alpha-1,3/1,6-mannosyltransferase ALG2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12526:SF22","OMA:SCHPO02884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,3/1,6-mannosyltransferase alg2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11B10.01","secondary_identifiers":["UniProtKB:Q96WW6"],"synonyms":[{"name":"GDP-Man:Man(1)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GDP-Man:Man(1)GlcNAc(2)-PP-dolichol mannosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GDP-Man:Man(2)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ALG2","type":"exact"},{"name":"asparagine-linked glycosylation protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q96WW6"}


id: PBO:0041717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calreticulin","termid":"PBO:0041717"}


id: MONDO:1011414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vestibular disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auditory system disorder, non-human animal","termid":"MONDO:1011301"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease, non-human animal","termid":"MONDO:1011342"},{"relation_name":"is_a","term_name":"perceptual disorders, non-human animal","termid":"MONDO:1011343"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vestibular disease, non-human animal","secondary_identifiers":["OMIA:002263"],"termid":"MONDO:1011414","xrefs":{"Monarch":{"xref_id":"1011414"}}}


id: PBO:0076948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor alpha","termid":"PBO:0076948"}


id: GO:0140722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mycophenolic acid (MPA). MPA is the first isolated antibiotic natural product in the world obtained from a culture of Penicillium brevicompactum in 1893.","definition_xrefs":["PMID:21398490","PMID:26751579","PMID:31209052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic biosynthetic process","termid":"GO:0017000"},{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"mycophenolic acid biosynthetic process","synonyms":[{"name":"MPA anabolism","type":"broad"},{"name":"MPA biosynthesis","type":"broad"},{"name":"MPA formation","type":"broad"},{"name":"MPA synthesis","type":"broad"},{"name":"mycophenolic acid anabolism","type":"exact"},{"name":"mycophenolic acid biosynthesis","type":"exact"},{"name":"mycophenolic acid formation","type":"exact"},{"name":"mycophenolic acid synthesis","type":"exact"}],"termid":"GO:0140722"}


id: MONDO:1011222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinal detachment that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal detachment, non-human animal","termid":"MONDO:1010321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal detachment, domestic cat","secondary_identifiers":["OMIA:000275-9685"],"termid":"MONDO:1011222","xrefs":{"Monarch":{"xref_id":"1011222"}}}


id: MONDO:0015918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare neurodegenerative disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare neurodegenerative disease (obsolete MONDO:0015918)","secondary_identifiers":["Orphanet:182070"],"synonyms":[{"name":"rare neurodegenerative disease","type":"exact"}],"termid":"MONDO:0015918","xrefs":{"Monarch":{"xref_id":"0015918"}}}


id: MONDO:0006054
data:
  {"annotated_genes":["SJAG_01419","SJAG_04885","SJAG_00997","SJAG_01156","SJAG_03429","SJAG_02748"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"},{"annotations":[84532,86749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011962"},{"annotations":[86610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032747"},{"annotations":[86801,86800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013872"}]},"cv_name":"mondo","definition":"A benign or malignant, primary or metastatic neoplasm affecting the male and female reproductive system.","definition_xrefs":["NCIT:C3674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00997":null,"SJAG_01156":null,"SJAG_01419":null,"SJAG_02748":null,"SJAG_03429":null,"SJAG_04885":null},"genotype_count":0,"is_obsolete":false,"name":"reproductive system neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0178830","EFO:1000051","MEDGEN:64246"],"synonyms":[{"name":"neoplasm of reproductive system","type":"exact"},{"name":"neoplasm of the reproductive system","type":"exact"},{"name":"reproductive neoplasm","type":"exact"},{"name":"reproductive system neoplasm","type":"exact"},{"name":"reproductive system neoplasm (disease)","type":"exact"},{"name":"reproductive system tumor","type":"exact"},{"name":"reproductive system tumour","type":"exact"},{"name":"reproductive tumor","type":"exact"},{"name":"reproductive tumour","type":"exact"},{"name":"tumor of reproductive system","type":"exact"},{"name":"tumor of the reproductive system","type":"exact"},{"name":"tumour of reproductive system","type":"exact"},{"name":"tumour of the reproductive system","type":"exact"}],"termid":"MONDO:0006054","terms_by_termid":{"MONDO:0009050":null,"MONDO:0011962":null,"MONDO:0013872":null,"MONDO:0032747":null},"xrefs":{"Monarch":{"xref_id":"0006054"}}}


id: PBO:0059853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 6","termid":"PBO:0059853"}


id: PBO:0070353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 26","termid":"PBO:0070353"}


id: GO:0042574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving retinal, a compound that plays an important role in the visual process in most vertebrates. In the retina, retinal combines with opsins to form visual pigments. Retinal is one of the forms of vitamin A.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoid metabolic process","termid":"GO:0001523"},{"relation_name":"is_a","term_name":"aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"retinal metabolic process","synonyms":[{"name":"retinal metabolism","type":"exact"},{"name":"retinaldehyde metabolic process","type":"exact"},{"name":"retinaldehyde metabolism","type":"exact"}],"termid":"GO:0042574"}


id: GO:0034268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of discadenine, (2S)-2-amino-4-{6-[(3-methylbut-2-en-1-yl)amino]-3H-purin-3-yl}butanoic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinin biosynthetic process","termid":"GO:0009691"},{"relation_name":"is_a","term_name":"discadenine metabolic process","termid":"GO:0034267"},{"relation_name":"is_a","term_name":"purine-containing compound biosynthetic process","termid":"GO:0072522"},{"relation_name":"is_a","term_name":"L-amino acid biosynthetic process","termid":"GO:0170034"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"discadenine biosynthetic process","synonyms":[{"name":"discadenine anabolism","type":"exact"},{"name":"discadenine biosynthesis","type":"exact"},{"name":"discadenine formation","type":"exact"},{"name":"discadenine synthesis","type":"exact"}],"termid":"GO:0034268"}


id: PBO:0064176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XC, pseudogene","termid":"PBO:0064176"}


id: MONDO:0001992
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the rete testis","direct_ancestors":[{"relation_name":"is_a","term_name":"rete testis neoplasm","termid":"MONDO:0003562"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"testicular cancer","termid":"MONDO:0005447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"rete testis adenocarcinoma","secondary_identifiers":["UMLS:C0863024","DOID:14544","MEDGEN:209023","NCIT:C8955"],"synonyms":[{"name":"adenocarcinoma of rete testis","type":"exact"},{"name":"adenocarcinoma of the rete testis","type":"exact"},{"name":"carcinoma, rete testis, malignant","type":"exact"},{"name":"rete testis adenocarcinoma","type":"exact"}],"termid":"MONDO:0001992","xrefs":{"Monarch":{"xref_id":"0001992"}}}


id: MONDO:0024621
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant serous cystic neoplasm usually involving the ovary or the pancreas. It is characterized by the presence of invasive malignant glandular epithelial cells which often form papillary structures.","definition_xrefs":["NCIT:C3778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serous adenocarcinoma","termid":"MONDO:0005278"},{"relation_name":"is_a","term_name":"cystadenocarcinoma","termid":"MONDO:0005596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"serous cystadenocarcinoma","secondary_identifiers":["MEDGEN:60212","UMLS:C0206701","ICDO:8441/3"],"synonyms":[{"name":"serous adenocarcinoma","type":"broad"},{"name":"serous cystadenocarcinoma","type":"exact"}],"termid":"MONDO:0024621","xrefs":{"Monarch":{"xref_id":"0024621"}}}


id: PBO:0080612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 46","termid":"PBO:0080612"}


id: MONDO:0015885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A cluster of closely related metabolic abnormalities associated with insulin resistance that confer an increased risk of the development of type 2 diabetes and cardiovascular disease. These abnormalities may include obesity, high blood pressure, abnormal cholesterol levels, proteinuria, and/or polycystic ovary syndrome.","definition_xrefs":["NCIT:C113169"],"gene_count":0,"genotype_count":0,"name":"obsolete rare insulin-resistance syndrome (obsolete MONDO:0015885)","secondary_identifiers":["Orphanet:181368"],"synonyms":[{"name":"insulin Resistance syndrome","type":"exact"}],"termid":"MONDO:0015885","xrefs":{"Monarch":{"xref_id":"0015885"}}}


id: GO:1902441
data:
  {"annotated_genes":["SJAG_04901","SJAG_02529","SJAG_03915"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90780,96361,113425],"is_not":false,"summary":null,"term":"GO:1902441"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a meiotic spindle pole body.","definition_xrefs":["PMID:20833892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to spindle pole body","termid":"GO:0071988"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic spindle pole body organization","termid":"GO:1990395"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02529":null,"SJAG_03915":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0008150","GO:0051179","GO:0007049"],"is_obsolete":false,"name":"protein localization to meiotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990945","GO:1990954"],"synonyms":[{"name":"establishment of protein localization to meiotic spindle pole body","type":"narrow"},{"name":"protein localisation in meiotic spindle pole body","type":"exact"},{"name":"protein localisation to meiotic spindle pole body","type":"exact"},{"name":"protein localization in meiotic spindle pole body","type":"exact"},{"name":"protein location to meiotic spindle pole body","type":"exact"}],"termid":"GO:1902441","terms_by_termid":{"GO:1902441":null}}


id: PBO:0051470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (I)-68 (pseudogene)","termid":"PBO:0051470"}


id: MONDO:0005877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nocardiosis (obsolete MONDO:0005877)","termid":"MONDO:0005877","xrefs":{"Monarch":{"xref_id":"0005877"}}}


id: GO:0102751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + a glucosyl-glycogenin = (1,4-alpha-D-glucosyl)n-glucosyl glucogenin + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-alpha-D-glucose:glucosyl-glycogenin alpha-D-glucosyltransferase activity (obsolete GO:0102751)","termid":"GO:0102751"}


id: GO:0008750
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+(in) + NAD+ + NADPH = H+(out) + NADH + NADP+.","definition_xrefs":["RHEA:47992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"oxidoreduction-driven active transmembrane transporter activity","termid":"GO:0015453"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"proton-translocating NAD(P)+ transhydrogenase activity","secondary_identifiers":["EC:7.1.1.1"],"synonyms":[{"name":"NAD(P)+ transhydrogenase (AB-specific) activity","type":"related"}],"termid":"GO:0008750"}


id: FYPO:0004028
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 5' deoxyribonuclease (pyrimidine dimer) activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endodeoxyribonuclease activity","termid":"FYPO:0002036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0005447","FYPO:0000661","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal 5' deoxyribonuclease (pyrimidine dimer) activity","termid":"FYPO:0004028"}


id: GO:0021651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of rhombomere 1 is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GO_REF:0000021","GOC:curators","GOC:dgh","GOC:cls","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere morphogenesis","termid":"GO:0021593"},{"relation_name":"part_of","term_name":"rhombomere 1 development","termid":"GO:0021567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 1 morphogenesis","termid":"GO:0021651"}


id: GO:0106191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of inorganic cations linked to oxidoreductase reactions.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on inogranic cations linked to oxidoreductase reactions (obsolete GO:0106191)","termid":"GO:0106191"}


id: GO:0032141
data:
  {"annotated_genes":["SJAG_00634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97680],"is_not":false,"summary":null,"term":"GO:0032141"}]},"cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a single cytosine insertion or a deletion that results in an unpaired cytosine.","definition_xrefs":["GOC:mah","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single base insertion or deletion binding","termid":"GO:0032138"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"single cytosine insertion binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032141","terms_by_termid":{"GO:0032141":null}}


id: GO:0002316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a B cell in the spleen acquires the specialized features of a follicular B cell. Follicular B cells are major population of mature recirculating B cells in the spleen and are located in the B-cell follicle region.","definition_xrefs":["ISBN:0781735149","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature B cell differentiation involved in immune response","termid":"GO:0002313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"follicular B cell differentiation","synonyms":[{"name":"follicular B cell development","type":"related"},{"name":"follicular B lymphocyte differentiation","type":"exact"},{"name":"follicular B-cell differentiation","type":"exact"},{"name":"follicular B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002316"}


id: GO:0015608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + carbohydrate(out) -> ADP + phosphate + carbohydrate(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type carbohydrate transporter activity","termid":"GO:0043211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"carbohydrate-importing ABC transporter activity","secondary_identifiers":["TC:3.A.1.1.1"],"synonyms":[{"name":"carbohydrate uptake transporter activity","type":"exact"},{"name":"carbohydrate-importing ATPase activity","type":"broad"},{"name":"sugar transporter","type":"narrow"}],"termid":"GO:0015608"}


id: PBO:0048169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2E3 antisense RNA 1","termid":"PBO:0048169"}


id: GO:0060096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of serotonin by a cell, in which released serotonin acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serotonin secretion","termid":"GO:0001820"},{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"serotonin secretion, neurotransmission","synonyms":[{"name":"serotonin release, neurotransmission","type":"related"}],"termid":"GO:0060096"}


id: PBO:0055894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 14B","termid":"PBO:0055894"}


id: GO:0061064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of nematode larval development, the process whose specific outcome is the progression of the nematode larva over time, from its formation to the mature structure. Nematode larval development begins with the newly hatched first-stage larva (L1) and ends with the end of the last larval stage (for example the fourth larval stage (L4) in C. elegans). Each stage of nematode larval development is characterized by proliferation of specific cell lineages and an increase in body size without alteration of the basic body plan. Nematode larval stages are separated by molts in which each stage-specific exoskeleton, or cuticle, is shed and replaced anew.","definition_xrefs":["GOC:kmv","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of post-embryonic development","termid":"GO:0048581"},{"relation_name":"is_a","term_name":"regulation of nematode larval development","termid":"GO:0061062"},{"relation_name":"negatively_regulates","term_name":"nematode larval development","termid":"GO:0002119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nematode larval development","termid":"GO:0061064"}


id: PR:C6Y4A4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC688.16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4A4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C688.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.16","synonyms":[{"name":"Spom972h-SPAC688.16","type":"exact"}],"termid":"PR:C6Y4A4"}


id: GO:0062243
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer of the two endoplasmic reticulum-derived lipid bilayer membranes that bound a double membrane vesicle viral factory.","definition_xrefs":["PMID:22440839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double membrane vesicle viral factory membrane","termid":"GO:0062242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"double membrane vesicle viral factory outer membrane","synonyms":[{"name":"outer membrane of double membrane vesicle viral factory","type":"exact"}],"termid":"GO:0062243"}


id: MONDO:0700044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tubulinopathy syndrome often associated with microtubule dysfunction, malformations of the corpus callosum, enlarged ventricles, dysgyria, abnormal basal ganglia, cerebellar vermis hypoplasia/dysplasia, and decreased white matter, due to heterozygous variants in TUBB2A. Individuals may present with variable combinations of malformations of the corpus callosum, enlarged ventricles, dysgyria, abnormal basal ganglia, cerebellar vermis hypoplasia/dysplasia, and decreased white matter. Epilepsy, speech impairment, and motor impairment are also frequent features.","direct_ancestors":[{"relation_name":"is_a","term_name":"tubulinopathy","termid":"MONDO:0100153"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"},{"relation_name":"is_a","term_name":"complex neurodevelopmental disorder with motor features","termid":"MONDO:0100516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"TUBB2A-related tubulinopathy","termid":"MONDO:0700044","xrefs":{"Monarch":{"xref_id":"0700044"}}}


id: GO:0023048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a lipid signal causes activation of a receptor.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal initiation by lipid mediator (obsolete GO:0023048)","synonyms":[{"name":"signal initiation by lipid mediator","type":"exact"}],"termid":"GO:0023048"}


id: GO:0001817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of a cytokine.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of cytokine production","secondary_identifiers":["GO:0042035","GO:0050707"],"synonyms":[{"name":"regulation of cytokine anabolism","type":"exact"},{"name":"regulation of cytokine biosynthesis","type":"exact"},{"name":"regulation of cytokine biosynthetic process","type":"narrow"},{"name":"regulation of cytokine formation","type":"exact"},{"name":"regulation of cytokine secretion","type":"narrow"},{"name":"regulation of cytokine synthesis","type":"exact"}],"termid":"GO:0001817"}


id: PBO:0016120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced P-specific polypeptide Pi","termid":"PBO:0016120"}


id: GO:0090514
data:
  {"annotated_genes":["SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103339],"is_not":false,"summary":null,"term":"GO:0090514"}]},"cv_name":"biological_process","definition":"The directed movement of L-tyrosine into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine transport","termid":"GO:0015828"},{"relation_name":"is_a","term_name":"amino acid transmembrane import into vacuole","termid":"GO:0032975"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"L-tyrosine transmembrane import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090514","terms_by_termid":{"GO:0090514":null}}


id: MOD:01526
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with one of the Applied Biosystems iTRAQ8plex reagent reporter+balance groups.","definition_xrefs":["Unimod:730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"},{"relation_name":"is_a","term_name":"isotope tagged reagent acylated residue","termid":"MOD:01705"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex reporter+balance reagent acylated residue","termid":"MOD:01526"}


id: FYPO:0008092
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize para-hydroxy benzoic acid and therefore requires para-hydroxy benzoic acid in the medium for vegetative cell growth.","definition_xrefs":["PMID:37156397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for para-hydroxy benzoic acid","termid":"FYPO:0008092"}


id: MONDO:0400002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The ingestion of excessive calcium supplementation or calcium containing antacids, and alkali resulting in a triad of hypercalcemia, metabolic alkalosis, and renal insufficiency.","definition_xrefs":["PMID:24288027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium metabolic disease","termid":"MONDO:0005557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"calcium-alkali syndrome","secondary_identifiers":["MEDGEN:6403","UMLS:C0026141"],"synonyms":[{"name":"milk-alkali syndrome","type":"exact"}],"termid":"MONDO:0400002","xrefs":{"Monarch":{"xref_id":"0400002"}}}


id: PBO:0054492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1892","termid":"PBO:0054492"}


id: SO:0002317
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that results in no gene product.","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"null_mutation","termid":"SO:0002055"},{"relation_name":"is_a","term_name":"decreased_gene_product_level","termid":"SO:0002316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"absent_gene_product","synonyms":[{"name":"absent gene product","type":"exact"}],"termid":"SO:0002317"}


id: PBO:0090676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set3 complex SANT/Myb domain subunit Snt1","termid":"PBO:0090676"}


id: GO:0030786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + (RS)-norcoclaurine = S-adenosyl-L-homocysteine + (RS)-coclaurine.","definition_xrefs":["EC:2.1.1.128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(RS)-norcoclaurine 6-O-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.128-RXN","RHEA:19941"],"synonyms":[{"name":"S-adenosyl-L-methionine:(RS)-norcoclaurine 6-O-methyltransferase activity","type":"related"}],"termid":"GO:0030786"}


id: GO:0019686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which a purine nucleoside is synthesized from another purine nucleoside.","definition_xrefs":["ISBN:0471394831","GOC:mah","ISBN:0306444747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing small molecule interconversion","termid":"GO:0015949"},{"relation_name":"is_a","term_name":"purine nucleoside metabolic process","termid":"GO:0042278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine nucleoside interconversion","termid":"GO:0019686"}


id: FYPO:0008215
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of GTPase inhibitor O1 than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0002682"],"is_obsolete":false,"name":"resistance to Rho GTPase inhibitor O1","termid":"FYPO:0008215"}


id: GO:0042753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a circadian rhythm behavior.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circadian rhythm","termid":"GO:0042752"},{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"positively_regulates","term_name":"circadian rhythm","termid":"GO:0007623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of circadian rhythm","synonyms":[{"name":"activation of circadian rhythm","type":"narrow"},{"name":"stimulation of circadian rhythm","type":"narrow"},{"name":"up regulation of circadian rhythm","type":"exact"},{"name":"up-regulation of circadian rhythm","type":"exact"},{"name":"upregulation of circadian rhythm","type":"exact"}],"termid":"GO:0042753"}


id: GO:0050542
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to icosanoids, any C20 polyunsaturated fatty acids or their derivatives, including the leukotrienes and the prostanoids.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"icosanoid binding","synonyms":[{"name":"eicosanoid binding","type":"exact"}],"termid":"GO:0050542"}


id: GO:0035376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a sterol into a cell or organelle. Sterols are steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.","definition_xrefs":["GOC:bf","PMID:19793923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol transport","termid":"GO:0015918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"sterol import","synonyms":[{"name":"sterol influx","type":"exact"},{"name":"sterol uptake","type":"exact"}],"termid":"GO:0035376"}


id: PBO:0086990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Repressor of translation initiation; binds eIF4G through its RGG domain and inhibits recruitment of the preinitiation complex; also contains an Lsm domain; may have a role in RNA processing; overproduction suppresses null mutation in clathrin heavy chain gene CHC1; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0086990"}


id: GO:0016166
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the dehydrogenation of phytoene to produce a carotenoid intermediate such as phytofluene.","definition_xrefs":["PMID:29176862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phytoene dehydrogenase activity","termid":"GO:0016166"}


id: FYECO:0000246
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose, salts, water and with proline as the nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, proline nitrogen source","termid":"FYECO:0000246"}


id: PBO:0028106
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_galactosylation","termid":"PBO:0028106"}


id: PR:Q10492
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pnn1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pinin homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.02","synonyms":[{"name":"Spom972h-pnn1","type":"exact"}],"termid":"PR:Q10492"}


id: PBO:0110355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBF4 pseudogene 2","termid":"PBO:0110355"}


id: PBO:0064143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase N3","termid":"PBO:0064143"}


id: PBO:0076582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 7","termid":"PBO:0076582"}


id: MONDO:0019627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital alacrima is characterized by deficient lacrimation (ranging from a complete absence of tears to hyposecretion of tears) that is present from birth.","definition_xrefs":["Orphanet:91416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal apparatus disorder","termid":"MONDO:0001854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated congenital alacrima","secondary_identifiers":["GARD:16799","UMLS:C4273963","SCTID:717262004","MEDGEN:896261"],"synonyms":[{"name":"nonsyndromic congenital alacrima","type":"exact"}],"termid":"MONDO:0019627","xrefs":{"Monarch":{"xref_id":"0019627"}}}


id: PBO:0056737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionyl aminopeptidase 1","termid":"PBO:0056737"}


id: PR:O59810
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vigilin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04599","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vigilin 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.14","secondary_identifiers":["UniProtKB:O59810"],"synonyms":[{"name":"KH domain-containing protein vgl1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-HDLBP","type":"exact"}],"termid":"PR:O59810"}


id: PBO:0070994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 18","termid":"PBO:0070994"}


id: PBO:0004321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-nitrophenylphosphatase","termid":"PBO:0004321"}


id: GO:1990097
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex that contains an oligomer of SeqA bound to GATC sites in methylated or newly-synthesized, hemi-methylated double-stranded DNA, with preference for the latter. Binding of SeqA to hemimethylated DNA sequesters oriC, prevents re-methylation of DNA by Dam and in turn stops premature re-initiation of replication during one replication cycle.","definition_xrefs":["GOC:bhm","PMID:12379844","PMID:15933720","PMID:23149570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SeqA-DNA complex","synonyms":[{"name":"SeqA-dsDNA complex","type":"narrow"},{"name":"SeqA-hemimethylated DNA complex","type":"narrow"},{"name":"SeqA-hemimethylation dsDNA complex","type":"narrow"}],"termid":"GO:1990097"}


id: PBO:0042992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHEK2 pseudogene 5","termid":"PBO:0042992"}


id: FYPO:0003144
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to methyl methanesulfonate is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal protein level during cellular response to methyl methanesulfonate","synonyms":[{"name":"normal protein accumulation during cellular response to methyl methanesulfonate","type":"related"},{"name":"normal protein level during cellular response to MMS","type":"exact"},{"name":"normal protein level during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"normal protein level during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"normal protein level during cellular response to methyl methanesulphonate","type":"exact"}],"termid":"FYPO:0003144"}


id: GO:0014866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the skeletal myofibril over time, from its formation to the mature structure. A skeletal myofibril is a myofibril specific to skeletal muscle cells.","definition_xrefs":["GOC:mtg_muscle","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myofibril assembly","termid":"GO:0030239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0044085","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"skeletal myofibril assembly","termid":"GO:0014866"}


id: GO:0004529
data:
  {"annotated_genes":["SJAG_01648","SJAG_01163","SJAG_01173","SJAG_03734","SJAG_04410","SJAG_02818","SJAG_02298","SJAG_01832","SJAG_02908","SJAG_05280","SJAG_05373","SJAG_00377"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108600,104725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008296"},{"annotations":[96616,87870,92481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035312"},{"annotations":[115181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033699"},{"annotations":[88027,109450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008311"},{"annotations":[96619,107248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051908"},{"annotations":[88030,106848,100642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008310"},{"annotations":[96621,111080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045145"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 5' or 3' terminus of a DNA molecule.","definition_xrefs":["GOC:mah","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exonuclease activity","termid":"GO:0004527"},{"relation_name":"is_a","term_name":"DNA nuclease activity","termid":"GO:0004536"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00377":null,"SJAG_01163":null,"SJAG_01173":null,"SJAG_01648":null,"SJAG_01832":null,"SJAG_02298":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03734":null,"SJAG_04410":null,"SJAG_05280":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0004527","GO:0140097","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"DNA exonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0004529","terms_by_termid":{"GO:0008296":null,"GO:0008310":null,"GO:0008311":null,"GO:0033699":null,"GO:0035312":null,"GO:0045145":null,"GO:0051908":null}}


id: PBO:0044095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member A3","termid":"PBO:0044095"}


id: PBO:0043355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLRN1 antisense RNA 1","termid":"PBO:0043355"}


id: GO:0021912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that results the commitment of a cell to become a motor neuron in the ventral spinal cord.","definition_xrefs":["GOC:dgh","GOC:jid","PMID:11262869","GOC:dph","GO_REF:0000021","GOC:cls"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in spinal cord motor neuron fate specification (obsolete GO:0021912)","termid":"GO:0021912"}


id: PBO:0076638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein like 1","termid":"PBO:0076638"}


id: MONDO:0005010
data:
  {"annotated_genes":["SJAG_00210","SJAG_02218"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86788,86789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012011"}]},"cv_name":"mondo","definition":"Narrowing of the coronary arteries due to fatty deposits inside the arterial walls. The diagnostic criteria may include documented history of any of the following: documented coronary artery stenosis greater than or equal to 50% (by cardiac catheterization or other modality of direct imaging of the coronary arteries); previous coronary artery bypass surgery (CABG); previous percutaneous coronary intervention (PCI); previous myocardial infarction. (ACC)","definition_xrefs":["NCIT:C26732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"},{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00210":null,"SJAG_02218":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"coronary artery disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D003324","MESH:D017202","SCTID:414024009","ICD9:414.9","ICD9:414.0","DOID:3393","EFO:0001645","ICD9:410-414.99","MEDGEN:365486","SCTID:414545008","UMLS:C1956346"],"synonyms":[{"name":"CAD","type":"exact"},{"name":"CHD","type":"exact"},{"name":"CHD (coronary heart disease)","type":"exact"},{"name":"coronary arteriosclerosis","type":"narrow"},{"name":"coronary artery disease","type":"exact"},{"name":"coronary artery disease or disorder","type":"exact"},{"name":"coronary disease","type":"exact"},{"name":"coronary heart disease","type":"exact"},{"name":"disease of coronary artery","type":"exact"},{"name":"disease or disorder of coronary artery","type":"exact"},{"name":"disorder of coronary artery","type":"exact"}],"termid":"MONDO:0005010","terms_by_termid":{"MONDO:0012011":null},"xrefs":{"Monarch":{"xref_id":"0005010"}}}


id: PBO:0083728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential 3-hydroxyacyl-CoA dehydratase of the ER membrane; involved in elongation of very long-chain fatty acids; evolutionarily conserved, similar to mammalian PTPLA and PTPLB; involved in sphingolipid biosynthesis and protein trafficking","termid":"PBO:0083728"}


id: GO:0050693
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein's ligand binding domain (LBD) domain, found in nuclear receptors. In general, the LBDs consist of three layers comprised of twelve alpha-helices and several beta-strands that are organized around a lipophilic ligand-binding pocket.","definition_xrefs":["PMID:9682036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"LBD domain binding","synonyms":[{"name":"ligand binding domain binding","type":"exact"}],"termid":"GO:0050693"}


id: MONDO:0013325
data:
  {"annotated_genes":["SJAG_02211"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86519],"is_not":false,"summary":null,"term":"MONDO:0013325"}]},"cv_name":"mondo","definition":"COG5-CDG is an extremely rare form of CDG syndrome characterized clinically in the single reported case to date by moderate mental retardation with slow and inarticulate speech, truncal ataxia, and mild hypotonia.","definition_xrefs":["Orphanet:263487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"},{"relation_name":"is_a","term_name":"defect in conserved oligomeric Golgi complex","termid":"MONDO:0017750"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02211":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"COG5-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:462226","SCTID:721100009","UMLS:C3150876","DOID:0070261","GARD:12348","OMIM:613612"],"synonyms":[{"name":"CDG III","type":"related"},{"name":"CDG syndrome type 3","type":"related"},{"name":"CDG syndrome type III","type":"exact"},{"name":"CDG-III","type":"exact"},{"name":"CDG2I","type":"exact"},{"name":"COG5-CDG","type":"exact"},{"name":"COG5-CDG (CDG-III)","type":"related"},{"name":"COG5-congenital disorder of glycosylation","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type III","type":"exact"},{"name":"congenital disorder of glycosylation type 2i","type":"exact"},{"name":"congenital disorder of glycosylation type III","type":"exact"},{"name":"congenital disorder of glycosylation, type III","type":"related"}],"termid":"MONDO:0013325","terms_by_termid":{"MONDO:0013325":null},"xrefs":{"Monarch":{"xref_id":"0013325"}}}


id: MONDO:0014900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive limb-girdle muscular dystrophy type 2Y (LGMD2Y) is a form of limb-girdle muscular dystrophy, presenting in the first or second decades of life, characterized by slowly progressive proximal and distal muscle weakness and atrophy. Additional manifestations include contractures of the proximal and distal interphalangeal hand joints, rigid spine, restricted pulmonary function, and mild cardiomyopathy.","definition_xrefs":["Orphanet:424261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005336"],"is_obsolete":false,"name":"autosomal recessive limb-girdle muscular dystrophy type 2Y","secondary_identifiers":["GARD:17708","NCIT:C181000","MEDGEN:1385152","OMIM:617072","SCTID:725907002","UMLS:C4511482","DOID:0110289"],"synonyms":[{"name":"LGMD2Y","type":"exact"},{"name":"TOR1AIP1 autosomal recessive limb-girdle muscular dystrophy","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy caused by mutation in TOR1AIP1","type":"exact"},{"name":"autosomal recessive muscular dystrophy due to LAP1B deficiency","type":"exact"},{"name":"autosomal recessive muscular dystrophy due to Torsin-1A-interacting protein 1 deficiency","type":"exact"},{"name":"muscular dystrophy with progressive weakness, distal contractures and rigid spine","type":"exact"},{"name":"muscular dystrophy, autosomal recessive, with rigid spine and distal joint contractures","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 2Y","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 2y","type":"exact"}],"termid":"MONDO:0014900","xrefs":{"Monarch":{"xref_id":"0014900"}}}


id: MONDO:0018901
data:
  {"annotated_genes":["SJAG_03145","SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013261"},{"annotations":[85660,85661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013262"}]},"cv_name":"mondo","definition":"Left ventricular noncompaction (LVNC) is a rare cardiomyopathy characterized anatomically by prominent left ventricular trabeculae and deep intratrabecular recesses causing progressive systolic and diastolic dysfunction, conduction abnormalities, and occasionally thromboembolic events.","definition_xrefs":["Orphanet:54260"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic cardiac malformation (obsolete MONDO:0018797)","termid":"MONDO:0018797"},{"relation_name":"is_a","term_name":"intrinsic cardiomyopathy","termid":"MONDO:0000591"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"familial cardiomyopathy","termid":"MONDO:0005217"},{"relation_name":"is_a","term_name":"congenital heart disease","termid":"MONDO:0005453"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03145":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"left ventricular noncompaction","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:10985","NCIT:C99544","OMIMPS:604169","UMLS:C1960469","DOID:0060480","NANDO:2200231","MEDGEN:450531"],"synonyms":[{"name":"LVNC","type":"exact"},{"name":"Lv non-compaction syndrome","type":"exact"},{"name":"left ventricular hypertrabeculation","type":"exact"},{"name":"left ventricular non-compaction cardiomyopathy","type":"exact"},{"name":"left ventricular non-compaction syndrome","type":"exact"},{"name":"left ventricular noncompaction (disease)","type":"exact"},{"name":"spongy myocardium","type":"exact"}],"termid":"MONDO:0018901","terms_by_termid":{"MONDO:0013261":null,"MONDO:0013262":null},"xrefs":{"Monarch":{"xref_id":"0018901"}}}


id: PBO:0002927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermembrane space protein sorting protein (predicted)","termid":"PBO:0002927"}


id: MONDO:1012760
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Low plasma cholesterol concentration that occurs in cattle due to a mutation in the APOB gene mutation. The “cholesterol deficiency” is a consequence of a decreased ability to be incorporated into lipoproteins for transport in circulation.","definition_xrefs":["PMID:31477289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholesterol deficiency, APOB-related, cattle","secondary_identifiers":["OMIA:001965-9913"],"synonyms":[{"name":"Holstein cholesterol deficiency","type":"narrow"}],"termid":"MONDO:1012760","xrefs":{"Monarch":{"xref_id":"1012760"}}}


id: PBO:0038531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 5, lysophosphatidic acid acyltransferase","termid":"PBO:0038531"}


id: PBO:0047914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, 5-azacytidine type, common, fra(9)(q12)","termid":"PBO:0047914"}


id: MOD:01519
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A distinct molecular entity produced from a protein or a protein modification as the result of a fragmentation process.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reporter fragment","termid":"MOD:01519"}


id: PBO:0040248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 4C cysteine peptidase","termid":"PBO:0040248"}


id: GO:0044087
data:
  {"annotated_genes":["SJAG_03581","SJAG_00521","SJAG_02169","SJAG_03086","SJAG_04771","SJAG_03851","SJAG_03421","SJAG_00973","SJAG_04100","SJAG_01993","SJAG_01464","SJAG_05290","SJAG_00766","SJAG_04615","SJAG_02332","SJAG_00906","SJAG_03353","SJAG_02278","SJAG_01894","SJAG_02736","SJAG_04638","SJAG_01188","SJAG_01771","SJAG_00883","SJAG_02671","SJAG_02684","SJAG_02379","SJAG_04551","SJAG_02645","SJAG_03704","SJAG_04457","SJAG_03631","SJAG_01386","SJAG_00082","SJAG_04776","SJAG_01794","SJAG_01805","SJAG_00424","SJAG_00514","SJAG_03241","SJAG_04509","SJAG_04455","SJAG_03681","SJAG_04666","SJAG_01837","SJAG_02342","SJAG_02990","SJAG_02566","SJAG_01790","SJAG_04464","SJAG_03508","SJAG_03592","SJAG_02795","SJAG_06270","SJAG_04479","SJAG_00661","SJAG_03453","SJAG_04468","SJAG_02514","SJAG_00279","SJAG_04522","SJAG_02700","SJAG_00610","SJAG_02104","SJAG_00526","SJAG_00229","SJAG_01114","SJAG_00142","SJAG_05289","SJAG_02592","SJAG_04597","SJAG_03342","SJAG_04943","SJAG_03048","SJAG_03936","SJAG_00718"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113813,98398,87732,91809],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[97778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000432"},{"annotations":[99167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010974"},{"annotations":[117447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905560"},{"annotations":[101869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[101874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[99091,106586,92407,115400,104530,95126,90208,92323,107030,109662,100773,91216,92940,99169,106725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[90209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"},{"annotations":[108052,108142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000786"},{"annotations":[98465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031453"},{"annotations":[116170,101878,89126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905561"},{"annotations":[90329,89344,92959,87370,110856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"},{"annotations":[105184,87690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001178"},{"annotations":[89474,93896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[112856,104673,114967,106535,88717,93286,89345,117392,105874,91902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[110927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"},{"annotations":[90668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090053"},{"annotations":[87013,91903,93900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"},{"annotations":[91904,86996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[88941,92976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090070"},{"annotations":[89185,114683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"},{"annotations":[110015,93290,87014,89478,101888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"},{"annotations":[93858,109837,90669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090055"},{"annotations":[107103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032231"},{"annotations":[90158,101248,102243,89304,104660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030833"},{"annotations":[116425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903023"},{"annotations":[109609,108221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003400"},{"annotations":[91907,89347,77728,94067,87372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032955"},{"annotations":[88916,102348,91910,94422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"},{"annotations":[92190,101652,91911,99675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032995"},{"annotations":[93368,109678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090006"},{"annotations":[101894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062123"},{"annotations":[118639,93862,93292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903499"},{"annotations":[117394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140279"},{"annotations":[110504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901673"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular component biogenesis, a process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cellular component.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cellular component 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of cellular component biogenesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:32915139":null},"termid":"GO:0044087","terms_by_termid":{"GO:0003400":null,"GO:0010974":null,"GO:0030833":null,"GO:0031030":null,"GO:0031031":null,"GO:0031453":null,"GO:0032231":null,"GO:0032955":null,"GO:0032995":null,"GO:0045899":null,"GO:0051016":null,"GO:0062123":null,"GO:0070610":null,"GO:0090006":null,"GO:0090053":null,"GO:0090055":null,"GO:0090070":null,"GO:0110161":null,"GO:0120306":null,"GO:0140279":null,"GO:0140281":null,"GO:0140748":null,"GO:1901673":null,"GO:1902917":null,"GO:1903023":null,"GO:1903024":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:1905560":null,"GO:1905561":null,"GO:1905757":null,"GO:1905758":null,"GO:2000432":null,"GO:2000786":null,"GO:2001178":null}}


id: PATO:0000141
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphology quality inhering in a bearer by virtue of the bearer's relative position, shape, arrangements and connectivity of an organism's various parts; the pattern underlying its form.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphology","termid":"PATO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structure","secondary_identifiers":["PATO:0001452"],"synonyms":[{"name":"relational structural quality","type":"exact"}],"termid":"PATO:0000141"}


id: MONDO:0009438
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary renal hypouricemia","termid":"MONDO:0009071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"hypouricemia, hypercalcinuria, and decreased bone density","secondary_identifiers":["MESH:C565475","GARD:15186","UMLS:C1855793","MEDGEN:343419","OMIM:242050"],"synonyms":[{"name":"hypouricemia, hypercalcinuria, and decreased bone density","type":"exact"}],"termid":"MONDO:0009438","xrefs":{"Monarch":{"xref_id":"0009438"}}}


id: GO:2001297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of N(omega)-methyl-L-arginine.","definition_xrefs":["PMID:10510241","GOC:rs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"},{"relation_name":"is_a","term_name":"N(omega)-methyl-L-arginine metabolic process","termid":"GO:2001296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"N(omega)-methyl-L-arginine catabolic process","synonyms":[{"name":"N(omega)-methyl-L-arginine breakdown","type":"exact"},{"name":"N(omega)-methyl-L-arginine catabolism","type":"exact"},{"name":"N(omega)-methyl-L-arginine degradation","type":"exact"}],"termid":"GO:2001297"}


id: PBO:0069870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1157, pseudogene","termid":"PBO:0069870"}


id: GO:0005129
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a granulocyte macrophage colony-stimulating factor receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"granulocyte macrophage colony-stimulating factor receptor binding","synonyms":[{"name":"GM-CSF receptor binding","type":"exact"},{"name":"GM-CSF receptor ligand","type":"narrow"},{"name":"GMC-SF receptor ligand","type":"narrow"},{"name":"granulocyte macrophage colony stimulating factor receptor binding","type":"exact"},{"name":"granulocyte macrophage colony-stimulating factor","type":"narrow"},{"name":"granulocyte macrophage colony-stimulating factor receptor ligand","type":"narrow"}],"termid":"GO:0005129"}


id: PBO:0078463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-His (anticodon GTG) 1-1","termid":"PBO:0078463"}


id: PBO:0003126
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.-","termid":"PBO:0003126"}


id: PBO:0048484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCOM1, MYZAP-POLR2M combined locus","termid":"PBO:0048484"}


id: MONDO:0015862
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete embryonal carcinoma (obsolete MONDO:0015862)","termid":"MONDO:0015862","xrefs":{"Monarch":{"xref_id":"0015862"}}}


id: GO:0051713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the cytolysis of cells in another organism.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cytolysis in another organism (obsolete GO:0051713)","synonyms":[{"name":"down regulation of cytolysis of cells of another organism","type":"exact"},{"name":"down-regulation of cytolysis of cells of another organism","type":"exact"},{"name":"downregulation of cytolysis of cells of another organism","type":"exact"},{"name":"inhibition of cytolysis of cells of another organism","type":"narrow"},{"name":"negative regulation of cytolysis in other organism","type":"exact"},{"name":"negative regulation of cytolysis of cells of another organism","type":"exact"}],"termid":"GO:0051713"}


id: MONDO:0024563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Mendelian susceptibility or predisposition to herpes simplex infection induced encephalitis in which the cause of the diseas is a mutation in the UNC93B1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"encephalopathy, acute, infection-induced","termid":"MONDO:0000166"},{"relation_name":"excluded_subClassOf","term_name":"herpes simplex encephalitis","termid":"MONDO:0012521"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"herpes simplex encephalitis, susceptibility to, 1","secondary_identifiers":["OMIM:610551","UMLS:C2750180","MEDGEN:413772"],"synonyms":[{"name":"IIAE1","type":"related"},{"name":"UNC93B1 herpes simplex encephalitis","type":"exact"},{"name":"encephalopathy, acute, infection-induced (HERPES-specific), susceptibility to, 1","type":"related"},{"name":"encephalopathy, acute, infection-induced (Herpes-specific), susceptibility to, 1","type":"related"},{"name":"encephalopathy, acute, infection-induced, susceptibility to, 1","type":"related"},{"name":"herpes simplex encephalitis caused by mutation in UNC93B1","type":"exact"},{"name":"herpes simplex encephalitis, susceptibility to, 1","type":"exact"}],"termid":"MONDO:0024563","xrefs":{"Monarch":{"xref_id":"0024563"}}}


id: GO:0090318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of chylomicron remodeling. Chylomicron remodeling is the acquisition, loss or modification of a protein or lipid within a chylomicron, including the hydrolysis of triglyceride by lipoprotein lipase and the subsequent loss of free fatty acid.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"chylomicron remodeling","termid":"GO:0034371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chylomicron remodeling","synonyms":[{"name":"regulation of chylomicron remodelling","type":"exact"}],"termid":"GO:0090318"}


id: PBO:0085885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; involved in invasive and pseudohyphal growth","termid":"PBO:0085885"}


id: PBO:0061353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 11","termid":"PBO:0061353"}


id: PBO:0036408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein DUF2410","termid":"PBO:0036408"}


id: PBO:0040441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 8B2","termid":"PBO:0040441"}


id: PBO:0039305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALK and LTK ligand 2","termid":"PBO:0039305"}


id: PR:Q9C0U7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps5 gene.","definition_xrefs":["UniProtKB:Q9C0U7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein vps5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCPJ732.01","synonyms":[{"name":"Spom972h-vps5","type":"exact"}],"termid":"PR:Q9C0U7"}


id: PBO:0087232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sensor of mitochondrial dysfunction; regulates the subcellular location of Rtg1p and Rtg3p, transcriptional activators of the retrograde (RTG) and TOR pathways; Rtg2p is inhibited by the phosphorylated form of Mks1p","termid":"PBO:0087232"}


id: MONDO:1010594
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperthyroidism that occurs in domestic guinea pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperthyroidism, non-human animal","termid":"MONDO:1010055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperthyroidism, domestic guinea pig","secondary_identifiers":["OMIA:000511-10141"],"termid":"MONDO:1010594","xrefs":{"Monarch":{"xref_id":"1010594"}}}


id: GO:0005212
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the lens of an eye.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of eye lens","termid":"GO:0005212"}


id: MONDO:0043240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of arthritis that affects hemophiliacs, which is characterized by bleeding into the joint space.","definition_xrefs":["NCIT:C27039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthritic joint disease","termid":"MONDO:0005578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemophilic arthropathy","secondary_identifiers":["MEDGEN:120487","SCTID:80813006","UMLS:C0263725"],"synonyms":[{"name":"arthropathy in haemophilia","type":"related"},{"name":"arthropathy in hemophilia","type":"related"},{"name":"hemophilic arthritis","type":"exact"},{"name":"hemophilic arthropathy","type":"exact"}],"termid":"MONDO:0043240","xrefs":{"Monarch":{"xref_id":"0043240"}}}


id: PBO:0075882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3GAL6 antisense RNA 1","termid":"PBO:0075882"}


id: MONDO:0003370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from the retroperitoneum. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:C27904"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retroperitoneal sarcoma","termid":"MONDO:0001501"},{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"retroperitoneal leiomyosarcoma","secondary_identifiers":["DOID:5284","MEDGEN:412162","UMLS:C2187547"],"synonyms":[{"name":"leiomyosarcoma of retroperitoneal space","type":"exact"},{"name":"retroperitoneal leiomyosarcoma","type":"exact"},{"name":"retroperitoneal space leiomyosarcoma","type":"exact"}],"termid":"MONDO:0003370","xrefs":{"Monarch":{"xref_id":"0003370"}}}


id: PBO:0065518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypyrimidine tract binding protein 3","termid":"PBO:0065518"}


id: SO:0001763
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A physical quality which inheres to the variant by virtue of the number instances of the variant within a population.","definition_xrefs":["PMID:17597783","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variant_quality","termid":"SO:0001761"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant_frequency","synonyms":[{"name":"variant frequency","type":"exact"}],"termid":"SO:0001763"}


id: PBO:0082934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic ATPase that is a ribosome-associated molecular chaperone; functions with J-protein partner Zuo1p; may be involved in folding of newly-made polypeptide chains; member of the HSP70 family; interacts with phosphatase subunit Reg1p; SSB1 has a paralog, SSB2, that arose from the whole genome duplication","termid":"PBO:0082934"}


id: PBO:0063538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudopodium enriched atypical kinase 1","termid":"PBO:0063538"}


id: PBO:0083658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endonuclease required for telomere elongation; required for telomeric 5' C-rich strand resection; involved in ds-break repair and processing hairpin DNA structures with the MRX complex; function requires sumoylation and phosphorylation; exists as inactive oligomers that are transiently released into smaller active units by phosphorylation; DNA damage triggers Sae2p removal, so active Sae2p is present only transiently; sequence and functional similarity with human CtIP/RBBP8","termid":"PBO:0083658"}


id: MONDO:1010076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypereosinophilic syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder, non-human animal","termid":"MONDO:0700106"},{"relation_name":"is_a","term_name":"cardiomyopathy, non-human animal","termid":"MONDO:1010010"},{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypereosinophilic syndrome, non-human animal","secondary_identifiers":["OMIA:000502"],"termid":"MONDO:1010076","xrefs":{"Monarch":{"xref_id":"1010076"}}}


id: GO:0050501
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-D-glucuronate + UDP-N-acetyl-D-glucosamine = [beta-N-acetyl-D-glucosaminyl-(1->4)-beta-D-glucuronosyl-(1->3)](n) + 2n UDP.","definition_xrefs":["EC:2.4.1.212","MetaCyc:2.4.1.212-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"hyaluronan synthase activity","secondary_identifiers":["Reactome:R-HSA-2160851","RHEA:12528"],"synonyms":[{"name":"HAS activity","type":"broad"},{"name":"alternating UDP-alpha-N-acetyl-D-glucosamine:beta-D-glucuronosyl-(1,3)-[nascent hyaluronan] 4-N-acetyl-beta-D-glucosaminyltransferase and UDP-alpha-D-glucuronate:N-acetyl-beta-D-glucosaminyl-(1,4)-[nascent hyaluronan] 3-beta-D-glucuronosyltransferase activity","type":"related"},{"name":"alternating UDP-alpha-N-acetyl-D-glucosamine:beta-D-glucuronosyl-(1->3)-[nascent hyaluronan] 4-N-acetyl-beta-D-glucosaminyltransferase and UDP-alpha-D-glucuronate:N-acetyl-beta-D-glucosaminyl-(1->4)-[nascent hyaluronan] 3-beta-D-glucuronosyltransferase activity","type":"related"},{"name":"seHAS","type":"related"},{"name":"spHAS","type":"related"}],"termid":"GO:0050501"}


id: GO:0042273
data:
  {"annotated_genes":["SJAG_00932","SJAG_01420","SJAG_01568","SJAG_04304","SJAG_03773","SJAG_02745","SJAG_04940","SJAG_00323","SJAG_04180","SJAG_04346","SJAG_00722","SJAG_03697","SJAG_01122","SJAG_03413","SJAG_01494","SJAG_04919","SJAG_03080","SJAG_01954","SJAG_02508","SJAG_01161","SJAG_02830","SJAG_04669","SJAG_05679","SJAG_03458","SJAG_02952","SJAG_03466","SJAG_04004","SJAG_05248","SJAG_04066","SJAG_03905","SJAG_02417","SJAG_02644","SJAG_01839","SJAG_02759","SJAG_00949","SJAG_04108","SJAG_00752","SJAG_04289","SJAG_00749","SJAG_02436","SJAG_01621","SJAG_05190","SJAG_00921","SJAG_01364","SJAG_04562","SJAG_02475","SJAG_00166","SJAG_00537","SJAG_01454","SJAG_00390","SJAG_01811","SJAG_02374","SJAG_04992","SJAG_03658","SJAG_01752","SJAG_01606","SJAG_03713","SJAG_00689","SJAG_04492","SJAG_04395","SJAG_02275","SJAG_01339","SJAG_04308","SJAG_02868","SJAG_01821","SJAG_05223","SJAG_00231","SJAG_02754","SJAG_02890","SJAG_02840","SJAG_02427","SJAG_03012","SJAG_03496","SJAG_04330","SJAG_02535","SJAG_01813","SJAG_00882","SJAG_03789","SJAG_00659","SJAG_04599","SJAG_00271","SJAG_01581","SJAG_04890","SJAG_04414","SJAG_00479"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87412,89423,89839,90303,90537,90538,91496,97903,99974,100233,101373,102408,102898,104066,105220,105221,106461,107439,107481,107659,110554,111776,112293,115612,116049,116787,118414,118465,118466],"is_not":false,"summary":null,"term":"GO:0042273"},{"annotations":[112394,92287,102021,108496,110299,118397,100231,111632,116146,98681,110933,115274,105490,91871,99899,106926,115273,103008,115658,97469,92690,89102,100089],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902626"},{"annotations":[118055,91180,103616,94442],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000448"},{"annotations":[98962,94321,96555,87126,110225,116071,101401,110226,114854,104709,104300,101402,97470,102022,103554,91580,114855,116070,103633,103784],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180023"},{"annotations":[118399,113109,95705,92381,107362,92289,115660],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000470"},{"annotations":[117169,114815,97438,89104,105492,114340,89316,117148,91872,100232,91581,110301,97472],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000463"},{"annotations":[106687,100787,107871],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902775"},{"annotations":[92848,101987,115148,117692,96974,101988,96973],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000027"}]},"cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a large ribosomal subunit; includes transport to the sites of protein synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex biogenesis","termid":"GO:0022613"},{"relation_name":"part_of","term_name":"ribosome biogenesis","termid":"GO:0042254"}],"gene_count":85,"genes_by_uniquename":{"SJAG_00166":null,"SJAG_00231":null,"SJAG_00271":null,"SJAG_00323":null,"SJAG_00390":null,"SJAG_00479":null,"SJAG_00537":null,"SJAG_00659":null,"SJAG_00689":null,"SJAG_00722":null,"SJAG_00749":null,"SJAG_00752":null,"SJAG_00882":null,"SJAG_00921":null,"SJAG_00932":null,"SJAG_00949":null,"SJAG_01122":null,"SJAG_01161":null,"SJAG_01339":null,"SJAG_01364":null,"SJAG_01420":null,"SJAG_01454":null,"SJAG_01494":null,"SJAG_01568":null,"SJAG_01581":null,"SJAG_01606":null,"SJAG_01621":null,"SJAG_01752":null,"SJAG_01811":null,"SJAG_01813":null,"SJAG_01821":null,"SJAG_01839":null,"SJAG_01954":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02417":null,"SJAG_02427":null,"SJAG_02436":null,"SJAG_02475":null,"SJAG_02508":null,"SJAG_02535":null,"SJAG_02644":null,"SJAG_02745":null,"SJAG_02754":null,"SJAG_02759":null,"SJAG_02830":null,"SJAG_02840":null,"SJAG_02868":null,"SJAG_02890":null,"SJAG_02952":null,"SJAG_03012":null,"SJAG_03080":null,"SJAG_03413":null,"SJAG_03458":null,"SJAG_03466":null,"SJAG_03496":null,"SJAG_03658":null,"SJAG_03697":null,"SJAG_03713":null,"SJAG_03773":null,"SJAG_03789":null,"SJAG_03905":null,"SJAG_04004":null,"SJAG_04066":null,"SJAG_04108":null,"SJAG_04180":null,"SJAG_04289":null,"SJAG_04304":null,"SJAG_04308":null,"SJAG_04330":null,"SJAG_04346":null,"SJAG_04395":null,"SJAG_04414":null,"SJAG_04492":null,"SJAG_04562":null,"SJAG_04599":null,"SJAG_04669":null,"SJAG_04890":null,"SJAG_04919":null,"SJAG_04940":null,"SJAG_04992":null,"SJAG_05190":null,"SJAG_05223":null,"SJAG_05248":null,"SJAG_05679":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0042254","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"ribosomal large subunit biogenesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ribosomal large subunit biogenesis and assembly","type":"exact"}],"termid":"GO:0042273","terms_by_termid":{"GO:0000027":null,"GO:0000448":null,"GO:0000463":null,"GO:0000470":null,"GO:0042273":null,"GO:0180023":null,"GO:1902626":null,"GO:1902775":null}}


id: PBO:0002594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine transporter (predicted)","termid":"PBO:0002594"}


id: PBO:0068275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNASE11 and RNASE12 antisense RNA 1","termid":"PBO:0068275"}


id: MONDO:0007392
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Coxoauricular syndrome is an extremely rare primary bone defect, described only in a mother and her three daughters to date, characterized by short stature, hip dislocation, minor vertebral and pelvic changes, and microtia with hearing loss. There have been no further descriptions in the literature since 1981.","definition_xrefs":["Orphanet:1508"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with multiple joint dislocations (obsolete MONDO:0019700)","termid":"MONDO:0019700"},{"relation_name":"is_a","term_name":"bone disorder","termid":"MONDO:0005381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coxoauricular syndrome","secondary_identifiers":["MEDGEN:343827","icd11.foundation:649449912","UMLS:C1852513","GARD:1558","MESH:C565148","OMIM:122780","SCTID:732248005"],"synonyms":[{"name":"coxoauricular syndrome","type":"exact"}],"termid":"MONDO:0007392","xrefs":{"Monarch":{"xref_id":"0007392"}}}


id: GO:0021522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroepithelial cells in the ventral neural tube acquire specialized structural and/or functional features of motor neurons. Motor neurons innervate an effector (muscle or glandular) tissue and are responsible for transmission of motor impulses from the brain to the periphery. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:cls","GOC:dgh","GOC:jid","PMID:11262869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in spinal cord","termid":"GO:0021515"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"part_of","term_name":"ventral spinal cord development","termid":"GO:0021517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal cord motor neuron differentiation","termid":"GO:0021522"}


id: GO:0052656
data:
  {"annotated_genes":["SJAG_04149"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109929],"is_not":false,"summary":null,"term":"GO:0052656"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-isoleucine = (S)-3-methyl-2-oxopentanoic acid + L-glutamic acid.","definition_xrefs":["RHEA:24801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched-chain-amino-acid transaminase activity","termid":"GO:0004084"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04149":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016769","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"L-isoleucine-2-oxoglutarate transaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R02199","MetaCyc:BRANCHED-CHAINAMINOTRANSFERILEU-RXN"],"synonyms":[{"name":"L-isoleucine aminotransferase activity","type":"exact"}],"termid":"GO:0052656","terms_by_termid":{"GO:0052656":null}}


id: MONDO:0003332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ovarian mature teratoma characterized by the presence of aberrant thyroid tissue with morphologic changes identical to thyroid carcinoma. Patients may present with abdominal mass and unusual symptoms due to thyrotoxicosis, or with Meigs syndrome (ascites and pleural effusion).","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teratoma with malignant transformation","termid":"MONDO:0006444"},{"relation_name":"is_a","term_name":"struma ovarii","termid":"MONDO:0006980"},{"relation_name":"is_a","term_name":"immature ovarian teratoma","termid":"MONDO:0018369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant struma ovarii","secondary_identifiers":["UMLS:C0334525","ICDO:9090/3","NCIT:C4291","DOID:5208","MEDGEN:137777"],"synonyms":[{"name":"struma ovarii, malignant","type":"exact"},{"name":"struma ovarii, malignant (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003332","xrefs":{"Monarch":{"xref_id":"0003332"}}}


id: MONDO:0031199
data:
  {"annotated_genes":["SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800029"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"inherited interstitial lung disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:619611"],"termid":"MONDO:0031199","terms_by_termid":{"MONDO:0800029":null},"xrefs":{"Monarch":{"xref_id":"0031199"}}}


id: FYPO:0003386
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of superoxide dismutase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal superoxide dismutase activity","termid":"FYPO:0003281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0000298","FYPO:0005447","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"increased superoxide dismutase activity","termid":"FYPO:0003386"}


id: PBO:0066997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA component of signal recognition particle 7SL1","termid":"PBO:0066997"}


id: PBO:0063664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-GPI attachment to proteins inositol deacylase 1","termid":"PBO:0063664"}


id: GO:0035175
data:
  {"annotated_genes":["SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[116180],"is_not":false,"summary":null,"term":"GO:0035175"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3-serine (position 10) + ATP = histone H3-phosphoserine (position 10) + ADP. This reaction is the addition of a phosphate group to the serine residue at position 10 of histone H3.","definition_xrefs":["GOC:bf","PMID:15041176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H3 kinase activity","termid":"GO:0140996"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0140096","GO:0016301","GO:0004672"],"is_obsolete":false,"name":"histone H3S10 kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0044021"],"synonyms":[{"name":"histone kinase activity (H3-S10 specific)","type":"exact"},{"name":"histone serine kinase activity (H3-S10 specific)","type":"exact"},{"name":"histone-serine kinase activity (H3-S10 specific)","type":"exact"}],"termid":"GO:0035175","terms_by_termid":{"GO:0035175":null}}


id: GO:0050801
data:
  {"annotated_genes":["SJAG_01397","SJAG_04028","SJAG_02023","SJAG_03879","SJAG_02735","SJAG_00532","SJAG_04096","SJAG_04403","SJAG_03850","SJAG_02457","SJAG_01078","SJAG_01004","SJAG_03962","SJAG_02470","SJAG_04867","SJAG_05294","SJAG_00792","SJAG_00668","SJAG_01400","SJAG_00802","SJAG_04584","SJAG_01803","SJAG_04031","SJAG_02883","SJAG_02834","SJAG_03667","SJAG_04616","SJAG_01353","SJAG_01817","SJAG_03401","SJAG_04167","SJAG_02019","SJAG_01435","SJAG_04743","SJAG_00301","SJAG_04892","SJAG_03528","SJAG_03793","SJAG_01007","SJAG_04677","SJAG_02474","SJAG_04698","SJAG_03516","SJAG_01129","SJAG_01694","SJAG_02847","SJAG_04111","SJAG_00516","SJAG_03866","SJAG_04955","SJAG_02080","SJAG_02716","SJAG_01183","SJAG_01913","SJAG_04607","SJAG_00328","SJAG_03862","SJAG_02578","SJAG_04757","SJAG_03631","SJAG_04675","SJAG_00923","SJAG_04760","SJAG_04185","SJAG_04258","SJAG_01990","SJAG_02532","SJAG_00222","SJAG_02399","SJAG_01669","SJAG_00136","SJAG_04032","SJAG_00822","SJAG_01541","SJAG_00212"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110454],"is_not":false,"summary":null,"term":"GO:0050801"},{"annotations":[93596,93588,99981,103287,91936],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010106"},{"annotations":[105191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055064"},{"annotations":[95768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055070"},{"annotations":[90682,90181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032468"},{"annotations":[101128,108153,111834,97828,97604,95169,96294,94940,113417,114581,115060,118070,112853,100514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006874"},{"annotations":[74486,99652,95769,92615,107341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006878"},{"annotations":[74487,92441,113370,91790,99982,106903,88749,95770,103760,93542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006879"},{"annotations":[89697,107073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010961"},{"annotations":[94811,103295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030026"},{"annotations":[96226,88989,96484,94922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030007"},{"annotations":[103676,103815,113833,94209,93252,102272,99653,100725,103074,93251,89931,95676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006882"},{"annotations":[116467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010960"},{"annotations":[105193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055075"},{"annotations":[91933,112287,103289,91937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[100007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030641"},{"annotations":[87172,113266,87173,98325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051453"},{"annotations":[61720,110273,110272,61611,68698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"},{"annotations":[88794,95139,101136,87512,99511,118225,89639,95319,89322,101483,103411,98417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007035"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of monoatomic ions within an organism or cell. 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id: PR:O94359
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC428.12c gene.","definition_xrefs":["UniProtKB:O94359","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C428.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.12c","synonyms":[{"name":"Spom972h-SPBC428.12c","type":"exact"}],"termid":"PR:O94359"}


id: PBO:0018232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tRNA-specific 2-thiouridylase Slm3 (predicted)","termid":"PBO:0018232"}


id: MONDO:0020080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete histiocytic and dendritic cell tumor (obsolete MONDO:0020080)","termid":"MONDO:0020080","xrefs":{"Monarch":{"xref_id":"0020080"}}}


id: PBO:0074947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 111","termid":"PBO:0074947"}


id: GO:1990093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The negative regulation of the receptor clustering process in which N-methyl-D-aspartate (NMDA) receptors are localized to distinct domains in the cell membrane.","definition_xrefs":["PMID:18442977"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of N-methyl-D-aspartate receptor clustering (obsolete GO:1990093)","synonyms":[{"name":"negative regulation of N-methyl-D-aspartate receptor clustering","type":"exact"},{"name":"negative regulation of NMDA receptor clustering","type":"exact"}],"termid":"GO:1990093"}


id: PBO:0087664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the inner nuclear membrane Asi ubiquitin ligase complex; Asi complex targets both misfolded proteins of the inner nuclear membrane-associated degradation (INMAD) pathway and regulators of sterol biosynthesis for ubiquitin-mediated degradation; acts with Asi1p and Asi2p to ensure the fidelity of SPS-sensor signaling by targeting latent unprocessed forms of Stp1p and Stp2p, maintaining the repressed state of gene expression in the absence of inducing amino acids","termid":"PBO:0087664"}


id: PBO:0034228
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fasciculates_with","termid":"PBO:0034228"}


id: PBO:0040641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic leucine zipper ATF-like transcription factor 2","termid":"PBO:0040641"}


id: MONDO:0005297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the urethra.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urethral disorder","termid":"MONDO:0004184"},{"relation_name":"is_a","term_name":"bacterial urinary tract infection","termid":"MONDO:0005247"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urethritis","secondary_identifiers":["EFO:0003878","ICD9:597.80","ICD9:099.40","UMLS:C0041976","MEDGEN:52934","MESH:D014526","DOID:1343","HP:0500006","NCIT:C26904","SCTID:84619001"],"synonyms":[{"name":"Nongonococcal urethritis","type":"narrow"},{"name":"inflammation of urethra","type":"exact"},{"name":"non-gonococcal urethritis","type":"exact"},{"name":"urethra inflammation","type":"exact"},{"name":"urethritis","type":"exact"},{"name":"urethritis (disease)","type":"exact"}],"termid":"MONDO:0005297","xrefs":{"Monarch":{"xref_id":"0005297"}}}


id: PR:O59679
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A rho guanine nucleotide exchange factor 38 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03117","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho guanine nucleotide exchange factor gef3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.17","secondary_identifiers":["UniProtKB:O59679"],"synonyms":[{"name":"Spom972h-ARHGEF38","type":"exact"}],"termid":"PR:O59679"}


id: MONDO:0018307
data:
  {"annotated_genes":["SJAG_00115","SJAG_04757","SJAG_03866","SJAG_05277"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86422,86423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011706"},{"annotations":[86408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010476"},{"annotations":[85124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014290"}]},"cv_name":"mondo","definition":"Neurodegeneration with brain iron accumulation (NBIA, formerly Hallervorden-Spatz syndrome) encompasses a group of rare neurodegenerative disorders characterized by progressive extrapyramidal dysfunction (dystonia, rigidity, choreoathetosis), iron accumulation in the brain and the presence of axonal spheroids, usually limited to the central nervous system.","definition_xrefs":["Orphanet:385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron metabolism disease","termid":"MONDO:0002279"},{"relation_name":"is_a","term_name":"neuroaxonal dystrophy","termid":"MONDO:0002283"},{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_03866":null,"SJAG_04757":null,"SJAG_05277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"neurodegeneration with brain iron accumulation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:444156","UMLS:C2931845","icd11.foundation:440483530","OMIMPS:234200","GARD:11899","MESH:C538421","NANDO:2100241","DOID:0110734"],"synonyms":[{"name":"NBIA","type":"exact"},{"name":"neurodegeneration with brain iron accumulation","type":"exact"}],"termid":"MONDO:0018307","terms_by_termid":{"MONDO:0010476":null,"MONDO:0011706":null,"MONDO:0014290":null},"xrefs":{"Monarch":{"xref_id":"0018307"}}}


id: MONDO:0004984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A biologic subset of breast carcinoma defined by high expression of genes characteristic of basal epithelial cells, including KRT5 and KRT17, annexin 8, CX3CL1, and TRIM29, and usually by lack of expression of the estrogen receptor (ER), progesterone receptor (PR), and human epidermal growth factor receptor 2 (HER2). It is the most common subtype of breast cancer associated with BRCA1 mutations, and is associated with a poor prognosis.","definition_xrefs":["NCIT:C53558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"invasive ductal breast carcinoma","termid":"MONDO:0004953"},{"relation_name":"is_a","term_name":"triple-negative breast carcinoma","termid":"MONDO:0005494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"basal-like breast carcinoma","secondary_identifiers":["EFO:0000281","MEDGEN:770987","UMLS:C3642347"],"synonyms":[{"name":"basal-like breast cancer","type":"exact"},{"name":"basal-like breast carcinoma","type":"exact"},{"name":"basal-like subtype of breast carcinoma","type":"exact"}],"termid":"MONDO:0004984","xrefs":{"Monarch":{"xref_id":"0004984"}}}


id: GO:0007279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a small group of cells (pole cells) at the posterior pole of the insect blastula. They are the first cells to cellularize after the arrival of nuclei at the end of the syncytial blastula stage and are the precursors to the insect germ cells.","definition_xrefs":["GOC:bf","PMID:9988212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellularization","termid":"GO:0007349"},{"relation_name":"part_of","term_name":"pole cell development","termid":"GO:0007277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pole cell formation","termid":"GO:0007279"}


id: GO:0141054
data:
  {"annotated_genes":["SJAG_03006","SJAG_02319"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115709,118344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140850"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of ubiquitin to a histone H2B substrate.","definition_xrefs":["PMID:25303536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone ubiquitin ligase activity","termid":"GO:0140852"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02319":null,"SJAG_03006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0004842"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0019787","GO:0016740","GO:0140096","GO:0003674","GO:0003824","GO:0016746","GO:0004842"],"is_obsolete":false,"name":"histone H2B ubiquitin ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0141054","terms_by_termid":{"GO:0140850":null}}


id: FYPO:0007189
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sampangine. Cells stop growing (and may die) at a concentration of sampangine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to sampangine","synonyms":[{"name":"hypersensitive to sampangine","type":"exact"},{"name":"sensitive to sampangine during mitotic cell cycle","type":"related"},{"name":"sensitive to sampangine during vegetative growth","type":"exact"}],"termid":"FYPO:0007189"}


id: PBO:0063723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progesterone receptor membrane component 1","termid":"PBO:0063723"}


id: PBO:0045357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidase 1","termid":"PBO:0045357"}


id: PBO:0073657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO interacting motifs containing 1","termid":"PBO:0073657"}


id: GO:0031011
data:
  {"annotated_genes":["SJAG_03036","SJAG_01016","SJAG_03839","SJAG_04355","SJAG_05020","SJAG_04989","SJAG_02549","SJAG_00045","SJAG_01611","SJAG_02303","SJAG_03579","SJAG_02872","SJAG_03033","SJAG_03145","SJAG_00873","SJAG_00735","SJAG_00746"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87274,88345,92271,92985,93489,93603,94955,98640,98888,101057,101182,108544,109069,111727,112638,113713,114896],"is_not":false,"summary":null,"term":"GO:0031011"}]},"cv_name":"cellular_component","definition":"A multisubunit protein complex that contains the Ino80p ATPase; exhibits chromatin remodeling activity.","definition_xrefs":["GOC:jh","GOC:rb","PMID:19355820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"INO80-type complex","termid":"GO:0097346"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00735":null,"SJAG_00746":null,"SJAG_00873":null,"SJAG_01016":null,"SJAG_01611":null,"SJAG_02303":null,"SJAG_02549":null,"SJAG_02872":null,"SJAG_03033":null,"SJAG_03036":null,"SJAG_03145":null,"SJAG_03579":null,"SJAG_03839":null,"SJAG_04355":null,"SJAG_04989":null,"SJAG_05020":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"Ino80 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"INO80 chromatin remodeling complex","type":"exact"}],"termid":"GO:0031011","terms_by_termid":{"GO:0031011":null}}


id: PBO:0045059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLG1 antisense RNA 1","termid":"PBO:0045059"}


id: PBO:0041906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cbl proto-oncogene B","termid":"PBO:0041906"}


id: GO:0017119
data:
  {"annotated_genes":["SJAG_02211","SJAG_03158","SJAG_00578","SJAG_01459","SJAG_00041","SJAG_01071","SJAG_03054"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88438,101809,102966,105637,108981,111502,116328],"is_not":false,"summary":null,"term":"GO:0017119"}]},"cv_name":"cellular_component","definition":"A multisubunit tethering complex of the CATCHR family (complexes associated with tethering containing helical rods) that has a role in tethering vesicles to the Golgi prior to fusion. Composed of 8 subunits COG1-8.","definition_xrefs":["GOC:krc","PMID:20972446","PMID:11980916","PMID:9792665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle tethering complex","termid":"GO:0099023"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00041":null,"SJAG_00578":null,"SJAG_01071":null,"SJAG_01459":null,"SJAG_02211":null,"SJAG_03054":null,"SJAG_03158":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005794","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Golgi transport complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"COG complex","type":"exact"},{"name":"Sec34/35 complex","type":"narrow"},{"name":"conserved oligomeric Golgi complex","type":"exact"}],"termid":"GO:0017119","terms_by_termid":{"GO:0017119":null}}


id: PBO:0033807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-telomeric_regions_absent_from_linear_chromosomes","termid":"PBO:0033807"}


id: MONDO:0011565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"abdominal obesity-metabolic syndrome","termid":"MONDO:0000816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"metabolic syndrome X","secondary_identifiers":["ICD9:277.7","OMIM:605552","DOID:14221","SCTID:237602007","MEDGEN:1640883","UMLS:C4552048","MESH:D024821"],"synonyms":[{"name":"AOMS1","type":"related"},{"name":"abdominal obesity metabolic syndrome","type":"related"},{"name":"abdominal obesity-metabolic syndrome 1","type":"exact"},{"name":"abdominal obesity-metabolic syndrome quantitative trait locus 1","type":"related"},{"name":"dysmetabolic syndrome X","type":"exact"},{"name":"metabolic syndrome 10","type":"related"},{"name":"metabolic syndrome type X","type":"exact"},{"name":"metabolic syndrome, protection against","type":"related"}],"termid":"MONDO:0011565","xrefs":{"Monarch":{"xref_id":"0011565"}}}


id: FYPO:0009051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing ammonium as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0002057","FYPO:0002058","FYPO:0005447"],"is_obsolete":false,"name":"increased cell population growth on ammonium nitrogen source","synonyms":[{"name":"increased growth on ammonium nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on ammonium nitrogen source","type":"exact"}],"termid":"FYPO:0009051"}


id: MONDO:0004652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute infection of the lung parenchyma caused by bacteria (e.g., Streptococcus pneumoniae, Haemophilus influenzae, Chlamydia pneumoniae, Mycoplasma pneumoniae, and Legionella pneumophila). Signs and symptoms include productive cough, fever, chills, shortness of breath, and chest pain.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"},{"relation_name":"is_a","term_name":"pneumonia","termid":"MONDO:0005249"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bacterial pneumonia","secondary_identifiers":["icd11.foundation:1323682030","EFO:1001272","MESH:D018410","UMLS:C0004626","MEDGEN:484","ICD9:482.9","SCTID:53084003","DOID:874","NCIT:C26704","ICD9:482.89"],"synonyms":[{"name":"Bacteria caused pneumonia","type":"exact"},{"name":"Bacteria pneumonia","type":"exact"},{"name":"gram-negative pneumonia","type":"exact"},{"name":"pneumonia due to other gram-negative bacteria","type":"exact"}],"termid":"MONDO:0004652","xrefs":{"Monarch":{"xref_id":"0004652"}}}


id: PBO:0070932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 40","termid":"PBO:0070932"}


id: GO:0085021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by a type I secretion system in the organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host morphology or physiology via protein secreted by type I secretion system (obsolete GO:0085021)","termid":"GO:0085021"}


id: FYPO:0004155
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein tyrosine phosphorylation during mitotic G1 phase (obsolete FYPO:0004155)","synonyms":[{"name":"increased peptidyl-tyrosine phosphorylation during mitotic G1 phase","type":"exact"},{"name":"increased protein tyrosine phosphorylation during cellular response to heat during G1 phase during vegetative growth","type":"exact"},{"name":"increased protein tyrosine phosphorylation during cellular response to heat during G1 phase of mitotic cell cycle","type":"exact"},{"name":"increased tyrosine phosphorylation during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0004155"}


id: MONDO:0003367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from the stomach. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:C27200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric cancer","termid":"MONDO:0001056"},{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"gastric leiomyosarcoma","secondary_identifiers":["MEDGEN:196652","DOID:5280","SCTID:447785000","UMLS:C0744295","HP:0031025"],"synonyms":[{"name":"gastric leiomyosarcoma","type":"exact"},{"name":"gastric leiomyosarcoma (disease)","type":"exact"},{"name":"leiomyosarcoma of stomach","type":"exact"},{"name":"stomach leiomyosarcoma","type":"exact"}],"termid":"MONDO:0003367","xrefs":{"Monarch":{"xref_id":"0003367"}}}


id: PBO:0017895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyldiphosphate:farnesyldiphosphatefarnesyltransferase (squalene synthase) Erg9","termid":"PBO:0017895"}


id: GO:1904157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a DN4 thymocyte. A DN4 thymocyte is a CD4-,CD8- thymocyte that is also CD44-,CD25-.","definition_xrefs":["GOC:dph","PMID:25398325","GOC:TermGenie","GO_REF:0000086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell differentiation in thymus","termid":"GO:0033077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"DN4 thymocyte differentiation","termid":"GO:1904157"}


id: PBO:0077307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM44 antisense RNA 2","termid":"PBO:0077307"}


id: PBO:0080223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasoactive intestinal peptide receptor 2","termid":"PBO:0080223"}


id: GO:0044016
data:
  {"annotated_genes":["SJAG_02990"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98468],"is_not":false,"summary":null,"term":"GO:0044016"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 4) = CoA + histone H3 N6-acetyl-L-lysine (position 4).","definition_xrefs":["PMID:18552846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 acetyltransferase activity","termid":"GO:0010484"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0034212","GO:0140096","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"histone H3K4 acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H3-K4 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K4 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K4 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K4 specific)","type":"exact"}],"termid":"GO:0044016","terms_by_termid":{"GO:0044016":null}}


id: RO:0002231
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x 'has starts location' y if and only if there exists some process z such that x 'starts with' z and z 'occurs in' y","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part_that_occurs_in","termid":"RO:0002479"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_start_location","termid":"RO:0002231"}


id: PBO:0071592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 9","termid":"PBO:0071592"}


id: MONDO:1011475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arthrogryposis multiplex congenita that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita, non-human animal","termid":"MONDO:1011455"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis multiplex congenita, pig","secondary_identifiers":["OMIA:001465-9823"],"termid":"MONDO:1011475","xrefs":{"Monarch":{"xref_id":"1011475"}}}


id: GO:0140481
data:
  {"annotated_genes":["SJAG_02457"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88752],"is_not":false,"summary":null,"term":"GO:0140481"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + iron-sulfur cluster(in) = ADP + phosphate + iron-sulfur cluster(out).","definition_xrefs":["PMID:31040179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type iron-sulfur cluster transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["TC:3.A.1.210.1"],"synonyms":[{"name":"ATPase-coupled Fe-S cluster transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled iron-sulfur cluster transmembrane transporter activity","type":"related"}],"termid":"GO:0140481","terms_by_termid":{"GO:0140481":null}}


id: GO:0071260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mechanical stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mechanical stimulus","termid":"GO:0009612"},{"relation_name":"is_a","term_name":"cellular response to abiotic stimulus","termid":"GO:0071214"},{"relation_name":"is_a","term_name":"cellular response to external stimulus","termid":"GO:0071496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to mechanical stimulus","secondary_identifiers":["Reactome:R-HSA-9855142"],"synonyms":[{"name":"cellular mechanical stimulus response","type":"exact"}],"termid":"GO:0071260"}


id: MONDO:0013728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pregnancy loss, recurrent, susceptibility in which the cause of the disease is a mutation in the F2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pregnancy loss, recurrent, susceptibility","termid":"MONDO:0000144"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy loss, recurrent, susceptibility to, 2","secondary_identifiers":["UMLS:C3280672","MEDGEN:482302","OMIM:614390"],"synonyms":[{"name":"F2 pregnancy loss, recurrent, susceptibility","type":"exact"},{"name":"RPRGL2","type":"related"},{"name":"pregnancy loss, recurrent, susceptibility caused by mutation in F2","type":"exact"},{"name":"pregnancy loss, recurrent, susceptibility to, 2","type":"exact"},{"name":"pregnancy loss, recurrent, susceptibility to, type 2","type":"exact"}],"termid":"MONDO:0013728","xrefs":{"Monarch":{"xref_id":"0013728"}}}


id: MONDO:0003022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An angiosarcoma occurring in childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"},{"relation_name":"is_a","term_name":"angiosarcoma","termid":"MONDO:0016982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pediatric angiosarcoma","secondary_identifiers":["MEDGEN:124687","DOID:4505","NCIT:C9174","UMLS:C0279988"],"synonyms":[{"name":"angiosarcoma","type":"broad"},{"name":"angiosarcoma (disease) of childhood","type":"exact"},{"name":"childhood angiosarcoma","type":"exact"},{"name":"childhood angiosarcoma (disease)","type":"exact"},{"name":"childhood hemangiosarcoma","type":"exact"},{"name":"paediatric angiosarcoma (disease)","type":"exact"},{"name":"paediatric hemangiosarcoma","type":"exact"},{"name":"pediatric angiosarcoma","type":"exact"},{"name":"pediatric angiosarcoma (disease)","type":"exact"},{"name":"pediatric hemangiosarcoma","type":"exact"}],"termid":"MONDO:0003022","xrefs":{"Monarch":{"xref_id":"0003022"}}}


id: _global:causal_agent_in_process
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A relationship between a material entity and a process where the material entity has some causal role that influences the process","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_relation_between_material_entity_and_a_process","termid":"_global:causal_relation_between_material_entity_and_a_process"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causal_agent_in_process","secondary_identifiers":["RO:0002500"],"termid":"_global:causal_agent_in_process"}


id: PBO:0065102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cAMP-dependent type II regulatory subunit alpha","termid":"PBO:0065102"}


id: GO:0052392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by an organism of a flux of calcium ions that occurs as part of the defense response of a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by organism of defense-related symbiont calcium ion flux (obsolete GO:0052392)","synonyms":[{"name":"activation by organism of symbiont Ca2+ flux","type":"exact"},{"name":"activation by organism of symbiont calcium ion flux","type":"exact"},{"name":"induction by organism of defense-related symbiont calcium ion flux","type":"exact"},{"name":"induction by organism of symbiont Ca2+ flux","type":"exact"}],"termid":"GO:0052392"}


id: PBO:0031493
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cortical_patch_assembly","termid":"PBO:0031493"}


id: GO:0090330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of platelet aggregation. Platelet aggregation is the adhesion of one platelet to one or more other platelets via adhesion molecules.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of platelet activation","termid":"GO:0010543"},{"relation_name":"is_a","term_name":"regulation of homotypic cell-cell adhesion","termid":"GO:0034110"},{"relation_name":"regulates","term_name":"platelet aggregation","termid":"GO:0070527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of platelet aggregation","termid":"GO:0090330"}


id: PBO:0055573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3009","termid":"PBO:0055573"}


id: PR:Q1MTQ9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosome subunit biogenesis protein NIP7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04205","PANTHER:PTHR23415:SF4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosome subunit biogenesis protein nip7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC320.11c","secondary_identifiers":["UniProtKB:Q1MTQ9"],"synonyms":[{"name":"Spom972h-NIP7","type":"exact"}],"termid":"PR:Q1MTQ9"}


id: GO:0010316
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Heterodimeric complex that catalyzes the pyrophosphate-dependent phosphorylation of D-fructose 6-phosphate into D-fructose 1,6-bisphosphate.","definition_xrefs":["PMID:2170409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"pyrophosphate-dependent phosphofructokinase complex","synonyms":[{"name":"PFK complex","type":"related"}],"termid":"GO:0010316"}


id: MOD:01647
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-threonine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-threonine removal","termid":"MOD:01647"}


id: PR:O36020
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug126 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O36020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 126 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.08","synonyms":[{"name":"Spom972h-mug126","type":"exact"}],"termid":"PR:O36020"}


