# terms

id: GO:1903319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein maturation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"positive regulation of protein metabolic process","termid":"GO:0051247"},{"relation_name":"is_a","term_name":"regulation of protein maturation","termid":"GO:1903317"},{"relation_name":"positively_regulates","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein maturation","synonyms":[{"name":"activation of protein maturation","type":"narrow"},{"name":"up regulation of protein maturation","type":"exact"},{"name":"up-regulation of protein maturation","type":"exact"},{"name":"upregulation of protein maturation","type":"exact"}],"termid":"GO:1903319"}


id: GO:0048071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of a pattern of pigment in one sex that is not observed in the other sex.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"developmental pigmentation","termid":"GO:0048066"},{"relation_name":"part_of","term_name":"sex differentiation","termid":"GO:0007548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sex-specific pigmentation","termid":"GO:0048071"}


id: GO:0019116
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-hydroxynicotine + H2O + O2 = 1-(6-hydroxypyrid-3-yl)-4-(methylamino)butan-1-one + hydrogen peroxide.","definition_xrefs":["GOC:jl","PMID:16095622"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydroxy-nicotine oxidase activity","termid":"GO:0019116"}


id: PBO:0043291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain containing 10A","termid":"PBO:0043291"}


id: PBO:0060734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 3","termid":"PBO:0060734"}


id: PR:O14016
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ure6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized urease accessory protein UreF-like (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.13","synonyms":[{"name":"Spom972h-ure6","type":"exact"}],"termid":"PR:O14016"}


id: GO:0120059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of any small intestinal transit process, the migration of ingested material along the length of the small intestine.","definition_xrefs":["PMID:15890336","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of digestive system process","termid":"GO:0060457"},{"relation_name":"is_a","term_name":"regulation of small intestinal transit","termid":"GO:0120057"},{"relation_name":"negatively_regulates","term_name":"small intestinal transit","termid":"GO:0120055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of small intestinal transit","synonyms":[{"name":"negative regulation of small bowel transit","type":"exact"},{"name":"negative regulation of small intestine transit","type":"exact"}],"termid":"GO:0120059"}


id: PBO:0116208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR7 ortholog, implicated vacuolar acidification, autophgy, or vacuole localization","termid":"PBO:0116208"}


id: GO:1903092
data:
  {"annotated_genes":["SJAG_02962","SJAG_02152","SJAG_03652","SJAG_03808"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89620,89621,116970,118249],"is_not":false,"summary":null,"term":"GO:1903092"}]},"cv_name":"biological_process","definition":"The process in which pyridoxine is transported across a membrane.","definition_xrefs":["GO_REF:0000069","GOC:TermGenie","PMID:15701794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridoxine transport","termid":"GO:0031923"},{"relation_name":"is_a","term_name":"vitamin transmembrane transport","termid":"GO:0035461"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02152":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_03808":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"pyridoxine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903092","terms_by_termid":{"GO:1903092":null}}


id: SO:0000710
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene encoding an mRNA that has the stop codon redefined as selenocysteine.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_part","term_name":"stop_codon_redefined_as_selenocysteine","termid":"SO:0000885"},{"relation_name":"is_a","term_name":"gene_with_stop_codon_read_through","termid":"SO:0000697"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_stop_codon_redefined_as_selenocysteine","synonyms":[{"name":"gene with stop codon redefined as selenocysteine","type":"exact"}],"termid":"SO:0000710"}


id: PBO:0052918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 19-1","termid":"PBO:0052918"}


id: GO:0005158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an insulin receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"insulin receptor binding","synonyms":[{"name":"insulin receptor ligand","type":"narrow"}],"termid":"GO:0005158"}


id: PBO:0081768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 700","termid":"PBO:0081768"}


id: MONDO:0001003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pneumoconiosis caused by exposure to talc. It is characterized by fibrosis and granulomatous changes in the lung parenchyma. Chest x-rays reveal diffuse lung opacities and pleural abnormalities.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumoconiosis","termid":"MONDO:0015926"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pneumoconiosis due to talc","secondary_identifiers":["MEDGEN:65961","DOID:10329","ICD9:502","NCIT:C27026","UMLS:C0238377","SCTID:73144008"],"synonyms":[{"name":"talc pneumoconiosis","type":"exact"}],"termid":"MONDO:0001003","xrefs":{"Monarch":{"xref_id":"0001003"}}}


id: PBO:0087031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L15A; binds to 5.8 S rRNA; homologous to mammalian ribosomal protein L15, no bacterial homolog; RPL15A has a paralog, RPL15B, that arose from the whole genome duplication","termid":"PBO:0087031"}


id: MONDO:1010512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in pigs in which the cause of the disease is a mutation in the SGCD gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy, pig","termid":"MONDO:1010460"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic cardiomyopathy, SGCD-related, pig","secondary_identifiers":["OMIA:002211-9823"],"termid":"MONDO:1010512","xrefs":{"Monarch":{"xref_id":"1010512"}}}


id: GO:0008597
data:
  {"annotated_genes":["SJAG_03793","SJAG_04871"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88204,118072],"is_not":false,"summary":null,"term":"GO:0008597"}]},"cv_name":"molecular_function","definition":"Binds to and modulates of the activity of the enzyme calcium-dependent protein serine/threonine phosphatase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphatase regulator activity","termid":"GO:0019888"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03793":null,"SJAG_04871":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"calcium-dependent protein serine/threonine phosphatase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-139906"],"synonyms":[{"name":"calcium-dependent protein serine/threonine phosphatase, intrinsic regulator activity","type":"narrow"}],"termid":"GO:0008597","terms_by_termid":{"GO:0008597":null}}


id: MONDO:0007061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acylase, cobalt-activated (obsolete MONDO:0007061)","secondary_identifiers":["OMIM:102590"],"synonyms":[{"name":"acylase, cobalt-activated","type":"exact"}],"termid":"MONDO:0007061","xrefs":{"Monarch":{"xref_id":"0007061"}}}


id: MONDO:0003177
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenoid cystic carcinoma that arises from the prostate gland.","definition_xrefs":["NCIT:C5539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoid cystic carcinoma","termid":"MONDO:0004971"},{"relation_name":"is_a","term_name":"prostate adenocarcinoma","termid":"MONDO:0005082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate adenoid cystic carcinoma","secondary_identifiers":["MEDGEN:233352","UMLS:C1335502","DOID:4868"],"synonyms":[{"name":"adenoid cystic carcinoma of prostate","type":"exact"},{"name":"adenoid cystic carcinoma of the prostate","type":"exact"},{"name":"prostate adenoid cystic carcinoma","type":"exact"},{"name":"prostate gland adenoid cystic carcinoma","type":"exact"}],"termid":"MONDO:0003177","xrefs":{"Monarch":{"xref_id":"0003177"}}}


id: PBO:0088707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GAP Gyp2","termid":"PBO:0088707"}


id: FYPO:0001478
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of guanosine-diphosphatase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal guanosine-diphosphatase activity","termid":"FYPO:0001476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"increased guanosine-diphosphatase activity","synonyms":[{"name":"increased GDPase activity","type":"exact"}],"termid":"FYPO:0001478"}


id: PBO:0003178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Exo70 (predicted)","termid":"PBO:0003178"}


id: PBO:0042991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHEK2 pseudogene 4","termid":"PBO:0042991"}


id: GO:0019137
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a thioglucoside + H2O = a thiol + a sugar.","definition_xrefs":["EC:3.2.1.147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"thioglucosidase activity","secondary_identifiers":["MetaCyc:RXN-9946"],"synonyms":[{"name":"myrosinase activity","type":"exact"},{"name":"sinigrase activity","type":"exact"},{"name":"sinigrinase activity","type":"exact"},{"name":"thioglucoside glucohydrolase activity","type":"exact"}],"termid":"GO:0019137"}


id: GO:0004169
data:
  {"annotated_genes":["SJAG_04316","SJAG_04053","SJAG_01491"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92517,101041,103585],"is_not":false,"summary":null,"term":"GO:0004169"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: dolichyl phosphate D-mannose + protein = dolichyl phosphate + O-D-mannosylprotein.","definition_xrefs":["EC:2.4.1.109","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase activity","termid":"GO:0000030"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01491":null,"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0140096","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"dolichyl-phosphate-mannose-protein mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5615556","MetaCyc:2.4.1.109-RXN","Reactome:R-HSA-5615604","Reactome:R-HSA-5615637"],"synonyms":[{"name":"O-glycoside mannosyltransferase","type":"broad"},{"name":"dolichol phosphomannose-protein mannosyltransferase activity","type":"related"},{"name":"dolichyl-phosphate-D-mannose:protein O-D-mannosyltransferase activity","type":"related"},{"name":"dolichyl-phosphate-mannose-protein O-mannosyltransferase activity","type":"exact"},{"name":"protein O-D-mannosyltransferase activity","type":"related"},{"name":"protein O-mannosyltransferase activity","type":"exact"}],"termid":"GO:0004169","terms_by_termid":{"GO:0004169":null}}


id: PBO:0088434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease Cdb4","termid":"PBO:0088434"}


id: GO:0035754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a B cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).","definition_xrefs":["CL:0000236","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte chemotaxis","termid":"GO:0048247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell chemotaxis","termid":"GO:0035754"}


id: MONDO:0043154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian cyst","termid":"MONDO:0003282"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal ovarian cyst","secondary_identifiers":["UMLS:C2931186","MEDGEN:443996","MESH:C536396"],"synonyms":[{"name":"fetal ovarian cyst","type":"related"},{"name":"foetal ovarian cyst","type":"related"}],"termid":"MONDO:0043154","xrefs":{"Monarch":{"xref_id":"0043154"}}}


id: PBO:0062097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 47","termid":"PBO:0062097"}


id: PBO:0091627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pdc2-Repressed lncRNA","termid":"PBO:0091627"}


id: PR:O74364
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- adn1 gene.","definition_xrefs":["UniProtKB:O74364","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion defective protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.03c","synonyms":[{"name":"Spom972h-adn1","type":"exact"}],"termid":"PR:O74364"}


id: GO:0004662
data:
  {"annotated_genes":["SJAG_04923","SJAG_03029"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95205,95206,100897],"is_not":false,"summary":null,"term":"GO:0004662"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: geranylgeranyl diphosphate + protein-cysteine = S-geranylgeranyl-protein + diphosphate. This reaction is the formation of a thioether linkage between the C-1 atom of the geranylgeranyl group and a cysteine residue fourth from the C-terminus of the protein. The protein substrates have the C-terminal sequence CA1A2X, where the terminal residue, X, is preferably leucine and A2 should not be aromatic. Known substrates include most g-subunits of heterotrimeric G proteins and Ras-related GTPases such as members of the Ras and Rac/Rho families.","definition_xrefs":["EC:2.5.1.59","PMID:8621375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein geranylgeranyltransferase activity","termid":"GO:0004661"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03029":null,"SJAG_04923":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016765","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"CAAX-protein geranylgeranyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-3701"],"synonyms":[{"name":"GGTase-I activity","type":"exact"},{"name":"GGTaseI activity","type":"exact"},{"name":"geranylgeranyl-diphosphate:protein-cysteine geranyltransferase activity","type":"exact"},{"name":"geranylgeranyltransferase type I activity","type":"exact"},{"name":"protein geranylgeranyltransferase type I","type":"related"},{"name":"type I protein geranyl-geranyltransferase activity","type":"related"}],"termid":"GO:0004662","terms_by_termid":{"GO:0004662":null}}


id: MONDO:0015919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic neurometabolic disease with non-X-linked intellectual disability (obsolete MONDO:0015919)","secondary_identifiers":["Orphanet:182073"],"termid":"MONDO:0015919","xrefs":{"Monarch":{"xref_id":"0015919"}}}


id: PR:Q09715
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tup11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional repressor tup11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18B11.10","synonyms":[{"name":"Spom972h-tup11","type":"exact"}],"termid":"PR:Q09715"}


id: PBO:0013801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthase Arg12","termid":"PBO:0013801"}


id: PBO:0066719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 16","termid":"PBO:0066719"}


id: PBO:0111536
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSF-Responsive amino acid Gene","termid":"PBO:0111536"}


id: PBO:0003740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR54 (predicted)","termid":"PBO:0003740"}


id: GO:0048099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation and/or maintenance of a lineage boundary between anterior and posterior compartments that cells cannot cross, thus separating the populations of cells in each compartment.","definition_xrefs":["GOC:jid","PMID:10625531","PMID:9374402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc lineage restriction","termid":"GO:0035161"},{"relation_name":"part_of","term_name":"anterior/posterior pattern specification, imaginal disc","termid":"GO:0007448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior/posterior lineage restriction, imaginal disc","termid":"GO:0048099"}


id: GO:0031928
data:
  {"annotated_genes":["SJAG_03652","SJAG_02152","SJAG_02962","SJAG_03808"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89628,89629,116974,118253],"is_not":false,"summary":null,"term":"GO:0031928"}]},"cv_name":"molecular_function","definition":"Enables the transfer of pyridoxine from one side of a membrane to the other. Pyridoxine, 2-methyl-3-hydroxy-4,5-bis(hydroxymethyl)pyridine, is one of the vitamin B6 compounds. Pyridoxal, pyridoxamine and pyridoxine are collectively known as vitamin B6, and are efficiently converted to the biologically active form of vitamin B6, pyridoxal phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02152":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_03808":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"pyridoxine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyridoxine transporter activity","type":"broad"}],"termid":"GO:0031928","terms_by_termid":{"GO:0031928":null}}


id: PBO:0041496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 open reading frame 56","termid":"PBO:0041496"}


id: MONDO:0003429
data:
  {"annotated_genes":["SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"}]},"cv_name":"mondo","definition":"A hormone producing pituitary gland adenoma, associated with a hormonal syndrome.","definition_xrefs":["NCIT:C8388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functioning pituitary gland neoplasm","termid":"MONDO:0003604"},{"relation_name":"is_a","term_name":"pituitary gland adenoma","termid":"MONDO:0006373"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03429":null},"genotype_count":0,"is_obsolete":false,"name":"functioning pituitary gland adenoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:163135","UMLS:C0854486","GARD:21389","DOID:5395","Orphanet:314753"],"synonyms":[{"name":"endocrine active pituitary adenoma","type":"exact"},{"name":"functioning adenoma of pituitary","type":"exact"},{"name":"functioning adenoma of pituitary gland","type":"exact"},{"name":"functioning adenoma of the pituitary","type":"exact"},{"name":"functioning adenoma of the pituitary gland","type":"exact"},{"name":"functioning pituitary adenoma","type":"exact"},{"name":"functioning pituitary gland adenoma","type":"exact"},{"name":"functioning pituitary gland adenoma (benign)","type":"exact"},{"name":"secreting pituitary adenoma","type":"exact"},{"name":"secretory adenoma of pituitary","type":"exact"},{"name":"secretory adenoma of pituitary gland","type":"exact"},{"name":"secretory adenoma of the pituitary","type":"exact"},{"name":"secretory adenoma of the pituitary gland","type":"exact"},{"name":"secretory pituitary adenoma","type":"exact"},{"name":"secretory pituitary gland adenoma","type":"exact"}],"termid":"MONDO:0003429","terms_by_termid":{"MONDO:0009050":null},"xrefs":{"Monarch":{"xref_id":"0003429"}}}


id: MONDO:0002449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal degeneration","termid":"MONDO:0001515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"nodular degeneration of cornea","secondary_identifiers":["UMLS:C0155122","DOID:2879","SCTID:72620002","ICD9:371.46","MEDGEN:509799"],"termid":"MONDO:0002449","xrefs":{"Monarch":{"xref_id":"0002449"}}}


id: PBO:0077676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF superfamily member 4","termid":"PBO:0077676"}


id: SO:0001571
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby a new splice site is created due to the activation of a new donor.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cryptic_splice_site_variant","termid":"SO:0001569"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic_splice_donor","synonyms":[{"name":"cryptic splice donor","type":"exact"}],"termid":"SO:0001571"}


id: MONDO:0032631
data:
  {"annotated_genes":["SJAG_01368"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85741],"is_not":false,"summary":null,"term":"MONDO:0032631"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01368":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 27","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112090","OMIM:618248","GARD:18375","UMLS:C4748826","MEDGEN:1648481"],"synonyms":[{"name":"MC1DN27","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 27","type":"related"}],"termid":"MONDO:0032631","terms_by_termid":{"MONDO:0032631":null},"xrefs":{"Monarch":{"xref_id":"0032631"}}}


id: MONDO:1012106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"internal hydrocephalus, non-human animal","termid":"MONDO:1011843"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal hydrocephalus, cattle","secondary_identifiers":["OMIA:000489-9913"],"termid":"MONDO:1012106","xrefs":{"Monarch":{"xref_id":"1012106"}}}


id: MONDO:0012297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, complex type of hereditary spastic paraplegia characterized by early-onset progressive spastic paraplegia presenting in infancy, associated with optic atrophy, fixation nystagmus, polyneuropathy occurring in late childhood/early adolescence leading to severe motor disability and progressive joint contractures and scoliosis. SPOAN syndrome is caused by mutations in the KLC2 gene (11q13.1), encoding kinesin light chain 2.","definition_xrefs":["Orphanet:320406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia, optic atropy, and neuropathy","secondary_identifiers":["OMIM:609541","MESH:C563702","DOID:0060491","GARD:17479","MEDGEN:324411","UMLS:C1836010"],"synonyms":[{"name":"SPOAN","type":"exact"},{"name":"SPOAN syndrome","type":"exact"},{"name":"spastic paraplegia, optic atropy, and neuropathy syndrome","type":"exact"},{"name":"spastic paraplegia-optic atrophy-neuropathy syndrome","type":"exact"}],"termid":"MONDO:0012297","xrefs":{"Monarch":{"xref_id":"0012297"}}}


id: GO:2000794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epithelial cell proliferation involved in lung morphogenesis.","definition_xrefs":["PMID:21513708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"epithelial cell proliferation involved in lung morphogenesis","termid":"GO:0060502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial cell proliferation involved in lung morphogenesis","termid":"GO:2000794"}


id: PBO:0087942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation elongation factor eIF-5A; previously thought to function in translation initiation; undergoes an essential hypusination modification; expressed under anaerobic conditions; ANB1 has a paralog, HYP2, that arose from the whole genome duplication; human EIF5A complements the inviability of the yeast hyp2 anb1 double null mutant","termid":"PBO:0087942"}


id: PBO:0055311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2739","termid":"PBO:0055311"}


id: PBO:0059895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 18","termid":"PBO:0059895"}


id: GO:0000770
data:
  {"annotated_genes":["SJAG_02602"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090539"}]},"cv_name":"biological_process","definition":"The directed movement of a peptide pheromone out of a cell by a secretion or export pathway used solely for the export of peptide pheromones.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02602":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"peptide pheromone export","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0007325"],"synonyms":[{"name":"a-factor export","type":"narrow"}],"termid":"GO:0000770","terms_by_termid":{"GO:0090539":null}}


id: GO:0009900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The opening of an anther, fruit or other structure, which permits the escape of reproductive bodies contained within it.","definition_xrefs":["ISBN:0879015322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dehiscence","secondary_identifiers":["Wikipedia:Dehiscence_(botany)"],"termid":"GO:0009900"}


id: GO:0140995
data:
  {"annotated_genes":["SJAG_00364","SJAG_01082","SJAG_03720"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106113,115735],"is_not":false,"summary":null,"term":"GO:0140995"},{"annotations":[113998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072371"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphate group to a histone H2A.","definition_xrefs":["PMID:25303536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone kinase activity","termid":"GO:0035173"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_01082":null,"SJAG_03720":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0004672","GO:0016301","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"histone H2A kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140995","terms_by_termid":{"GO:0072371":null,"GO:0140995":null}}


id: PBO:0045802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EDNRB antisense RNA 1","termid":"PBO:0045802"}


id: PBO:0003375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR3","termid":"PBO:0003375"}


id: GO:0031833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 7 serotonin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type 7 serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 7 receptor binding","type":"exact"},{"name":"type 7 serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031833"}


id: PBO:0011987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA family recombinase Rad51/Rhp51","termid":"PBO:0011987"}


id: GO:0030535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Feeding behavior in a fully developed and mature organism, as described in insects.","definition_xrefs":["GOC:jid","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete adult feeding behavior (sensu Insecta) (obsolete GO:0030535)","synonyms":[{"name":"adult feeding behavior (sensu Insecta)","type":"exact"}],"termid":"GO:0030535"}


id: PR:O94332
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrn11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I-specific transcription initiation factor rrn11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.17c","synonyms":[{"name":"Spom972h-rrn11","type":"exact"}],"termid":"PR:O94332"}


id: MONDO:0010822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Warburg micro syndrome in which the cause of the disease is a mutation in the RAB3GAP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Warburg micro syndrome","termid":"MONDO:0016649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0006025","MONDO:0002320"],"is_obsolete":false,"name":"Warburg micro syndrome 1","secondary_identifiers":["MEDGEN:333142","DOID:0110716","UMLS:C1838625","OMIM:600118"],"synonyms":[{"name":"RAB3GAP1 Warburg micro syndrome","type":"exact"},{"name":"WARBM1","type":"exact"},{"name":"WARBURG micro syndrome 1","type":"related"},{"name":"Warburg micro syndrome 1","type":"exact"},{"name":"Warburg micro syndrome caused by mutation in RAB3GAP1","type":"exact"},{"name":"Warburg micro syndrome type 1","type":"exact"},{"name":"micro syndrome","type":"related"},{"name":"micro syndrome 1","type":"exact"}],"termid":"MONDO:0010822","xrefs":{"Monarch":{"xref_id":"0010822"}}}


id: GO:0090160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances from the Golgi to lysosomes.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi to vacuole transport","termid":"GO:0006896"},{"relation_name":"is_a","term_name":"lysosomal transport","termid":"GO:0007041"},{"relation_name":"is_a","term_name":"cytosolic transport","termid":"GO:0016482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"Golgi to lysosome transport","termid":"GO:0090160"}


id: PBO:0087044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L20B; homologous to mammalian ribosomal protein L18A, no bacterial homolog; RPL20B has a paralog, RPL20A, that arose from the whole genome duplication","termid":"PBO:0087044"}


id: MONDO:0014194
data:
  {"annotated_genes":["SJAG_02646"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85423],"is_not":false,"summary":null,"term":"MONDO:0014194"}]},"cv_name":"mondo","definition":"Any mitochondrial complex III deficiency in which the cause of the disease is a mutation in the CYC1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex III deficiency, nuclear type","termid":"MONDO:0020811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02646":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex III deficiency nuclear type 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:815883","DOID:0080115","GARD:15970","UMLS:C3809553","OMIM:615453"],"synonyms":[{"name":"CYC1 mitochondrial complex III deficiency","type":"exact"},{"name":"MC3DN6","type":"related"},{"name":"mitochondrial Complex 3 deficiency, nuclear type 6","type":"related"},{"name":"mitochondrial complex III deficiency caused by mutation in CYC1","type":"exact"},{"name":"mitochondrial complex III deficiency, nuclear type 6","type":"related"}],"termid":"MONDO:0014194","terms_by_termid":{"MONDO:0014194":null},"xrefs":{"Monarch":{"xref_id":"0014194"}}}


id: GO:1905312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac neural crest cell migration involved in outflow tract morphogenesis.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GO_REF:0000058","GOC:rl","PMID:17628518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","termid":"GO:1905310"},{"relation_name":"positively_regulates","term_name":"cardiac neural crest cell migration involved in outflow tract morphogenesis","termid":"GO:0003253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","synonyms":[{"name":"activation of cardiac neural crest cell migration involved in outflow tract morphogenesis","type":"narrow"},{"name":"up regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","type":"exact"},{"name":"up-regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","type":"exact"},{"name":"upregulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","type":"exact"}],"termid":"GO:1905312"}


id: GO:0071532
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an ankyrin repeat of a protein. Ankyrin repeats are tandemly repeated modules of about 33 amino acids; each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90-degree angle, and repeats stack to form an L-shaped structure.","definition_xrefs":["GOC:mah","InterPro:IPR002110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"ankyrin repeat binding","synonyms":[{"name":"ANK repeat binding","type":"exact"}],"termid":"GO:0071532"}


id: GO:0004859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a phospholipase, an enzyme that catalyzes of the hydrolysis of a phospholipid.","definition_xrefs":["GOC:rl","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase inhibitor activity","termid":"GO:0055102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"}],"interesting_parent_ids":["GO:0098772","GO:0004857","GO:0003674","GO:0140678","GO:0030234"],"is_obsolete":false,"name":"phospholipase inhibitor activity","termid":"GO:0004859"}


id: MONDO:0001186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by persistent or recurrent episodes of feeling detached from one's self (either one's body or one's mental processes), although the sufferer remains aware that this is only a feeling and does not represent reality.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dissociative disorder","termid":"MONDO:0001160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"depersonalization disorder","secondary_identifiers":["MEDGEN:151919","NCIT:C94331","SCTID:70764005","UMLS:C0683416","DOID:11038","ICD9:300.6"],"synonyms":[{"name":"neurotic derealization","type":"exact"}],"termid":"MONDO:0001186","xrefs":{"Monarch":{"xref_id":"0001186"}}}


id: GO:0050857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a B- or T cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"is_a","term_name":"regulation of antigen receptor-mediated signaling pathway","termid":"GO:0050854"},{"relation_name":"positively_regulates","term_name":"antigen receptor-mediated signaling pathway","termid":"GO:0050851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of antigen receptor-mediated signaling pathway","synonyms":[{"name":"activation of antigen receptor-mediated signaling pathway","type":"narrow"},{"name":"positive regulation of antigen receptor mediated signalling pathway","type":"exact"},{"name":"stimulation of antigen receptor-mediated signaling pathway","type":"narrow"},{"name":"up regulation of antigen receptor-mediated signaling pathway","type":"exact"},{"name":"up-regulation of antigen receptor-mediated signaling pathway","type":"exact"},{"name":"upregulation of antigen receptor-mediated signaling pathway","type":"exact"}],"termid":"GO:0050857"}


id: PBO:0079653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 1","termid":"PBO:0079653"}


id: PBO:0088423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tRNA-specific 2-thiouridylase Slm3","termid":"PBO:0088423"}


id: PBO:0084546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the Puf family of RNA-binding proteins; interacts with mRNAs encoding membrane-associated proteins; involved in localizing the Arp2/3 complex to mitochondria; overexpression causes increased sensitivity to benomyl; JSN1 has a paralog, PUF2, that arose from the whole genome duplication","termid":"PBO:0084546"}


id: PBO:0084410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lysyl-tRNA synthetase","termid":"PBO:0084410"}


id: MONDO:0007215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachydactyly type A1 (BDA1) is a congenital malformation characterized by apparent shortness (or absence) of the middle phalanges of all digits, and occasional fusion with the terminal phalanges.","definition_xrefs":["Orphanet:93388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly type A1","secondary_identifiers":["MEDGEN:354673","GARD:978","MESH:C537088","SCTID:715720006","UMLS:C1862151","OMIM:112500","icd11.foundation:568452529","DOID:0110964"],"synonyms":[{"name":"BDA1","type":"exact"},{"name":"Farabee type brachydactyly","type":"exact"},{"name":"Farabee-type brachydactyly","type":"related"},{"name":"brachydactyly Farabee type","type":"related"},{"name":"brachydactyly, Farabee type","type":"exact"},{"name":"brachydactyly, type A1","type":"related"}],"termid":"MONDO:0007215","xrefs":{"Monarch":{"xref_id":"0007215"}}}


id: PBO:0081271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 35","termid":"PBO:0081271"}


id: GO:0062205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-copalyl diphosphate = diphosphate + miltiradiene.","definition_xrefs":["RHEA:33983","PMID:24990389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"miltiradiene synthase activity","secondary_identifiers":["MetaCyc:RXN-13338","GO:0102353","EC:4.2.3.131"],"synonyms":[{"name":"multiradiene synthase activity","type":"related"}],"termid":"GO:0062205"}


id: PBO:0072415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 20","termid":"PBO:0072415"}


id: PBO:0069748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1029, pseudogene","termid":"PBO:0069748"}


id: MONDO:0021171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Classic form of Timothy syndrome, includes all features of generic.","direct_ancestors":[{"relation_name":"is_a","term_name":"Timothy syndrome","termid":"MONDO:0010979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0000426"],"is_obsolete":false,"name":"Timothy syndrome, classic type","secondary_identifiers":["ICD9:759.89","SCTID:699256006"],"synonyms":[{"name":"Timothy syndrome type 1 (disorder)","type":"exact"}],"termid":"MONDO:0021171","xrefs":{"Monarch":{"xref_id":"0021171"}}}


id: MONDO:0017832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with Mycobacterium xenopi.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mycobacterial infectious disease","termid":"MONDO:0020590"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mycobacterium xenopi infection","secondary_identifiers":["UMLS:C0275715","Orphanet:314946","MEDGEN:546776"],"synonyms":[{"name":"M. xenopi","type":"related"},{"name":"Mycobacterium xenopi","type":"related"},{"name":"Mycobacterium xenopi caused disease or disorder","type":"exact"},{"name":"Mycobacterium xenopi disease or disorder","type":"exact"},{"name":"Mycobacterium xenopi infectious disease","type":"exact"}],"termid":"MONDO:0017832","xrefs":{"Monarch":{"xref_id":"0017832"}}}


id: PBO:0005364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Ucp12 (predicted)","termid":"PBO:0005364"}


id: FYPO:0000685
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular response phenotype in which pheromone-responsive positive regulation of transcription from an RNA polymerase II promoter occurs at a lower level of pheromone than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete transcriptional response to pheromone at decreased pheromone level (obsolete FYPO:0000685)","synonyms":[{"name":"increased sensitivity of positive regulation of transcription from RNA polymerase II promoter by pheromones to pheromone","type":"related"},{"name":"increased transcriptional response to pheromone","type":"related"},{"name":"positive regulation of transcription from RNA polymerase II promoter by pheromones at decreased pheromone level","type":"exact"},{"name":"sensitive to pheromone","type":"related"}],"termid":"FYPO:0000685"}


id: PBO:0056969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 25","termid":"PBO:0056969"}


id: PBO:0070517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 16","termid":"PBO:0070517"}


id: MONDO:0019212
data:
  {"annotated_genes":["SJAG_00580","SJAG_03349","SJAG_04865","SJAG_01474","SJAG_03352"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86587,86586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008293"},{"annotations":[85635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013868"},{"annotations":[85498,85497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014713"}]},"cv_name":"mondo","definition":"Disseminated superficial actinic porokeratosis (DSAP) is the most common form of porokeratosis characterized by the presence of several small annular plaques with a distinctive keratotic rim found most commonly on sun-exposed areas of the skin, particularly the extremities.","definition_xrefs":["Orphanet:79152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porokeratosis","termid":"MONDO:0006602"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00580":null,"SJAG_01474":null,"SJAG_03349":null,"SJAG_03352":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"disseminated superficial actinic porokeratosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:10983","MEDGEN:120561","icd11.foundation:1828294192","SCTID:41495000","UMLS:C0265970","ICD9:692.75"],"termid":"MONDO:0019212","terms_by_termid":{"MONDO:0008293":null,"MONDO:0013868":null,"MONDO:0014713":null},"xrefs":{"Monarch":{"xref_id":"0019212"}}}


id: PBO:0091738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR adaptor protein, human endophilin A1-like ortholog, implicated in endocytosis","termid":"PBO:0091738"}


id: PBO:0075523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E3","termid":"PBO:0075523"}


id: GO:0052630
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UTP + N-acetyl-alpha-D-galactosamine 1-phosphate = diphosphate + UDP-N-acetyl-D-galactosamine.","definition_xrefs":["EC:2.7.7.83","RHEA:34363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uridylyltransferase activity","termid":"GO:0070569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016779","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"UDP-N-acetylgalactosamine diphosphorylase activity","synonyms":[{"name":"N-acetylgalactosamine 1-phosphate uridylyltransferase","type":"exact"},{"name":"N-acetylgalactosamine-1-phosphate uridyltransferase activity","type":"exact"},{"name":"UDP-GalNAc pyrophosphorylase activity","type":"exact"},{"name":"UDP-N-acetylgalactosamine pyrophosphorylase activity","type":"exact"},{"name":"UDP-acetylgalactosamine pyrophosphorylase activity","type":"exact"},{"name":"UTP:2-acetamido-2-deoxy-alpha-D-galactose-1-phosphate uridylyltransferase activity","type":"exact"},{"name":"UTP:N-acetyl-alpha-D-galactosamine-1-phosphate uridylyltransferase activity","type":"exact"},{"name":"uridine diphosphate-N-acetylgalactosamine pyrophosphorylase activity","type":"exact"},{"name":"uridine diphosphoacetylgalactosamine phosphorylase activity","type":"exact"},{"name":"uridine diphosphoacetylgalactosamine pyrophosphorylase activity","type":"exact"}],"termid":"GO:0052630"}


id: GO:0075040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process modulates the frequency, rate or extent of turgor formation in the symbiont appressorium.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of establishment of turgor in appressorium (obsolete GO:0075040)","synonyms":[{"name":"regulation of turgor formation in appressorium","type":"related"}],"termid":"GO:0075040"}


id: MONDO:0008444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic paraplegia, optic atrophy, and dementia","secondary_identifiers":["MEDGEN:356630","MESH:C566679","OMIM:182830","UMLS:C1866849"],"synonyms":[{"name":"spastic paraplegia, optic atrophy, and dementia","type":"exact"}],"termid":"MONDO:0008444","xrefs":{"Monarch":{"xref_id":"0008444"}}}


id: GO:0032039
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that stably associates with the C-terminus of RNA polymerase II and mediates 3'-end processing of small nuclear RNAs generated by RNA polymerase II.","definition_xrefs":["PMID:16239144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"integrator complex","termid":"GO:0032039"}


id: MONDO:0005954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection with larvae of the blow fly Cochliomyia hominivorax (Callitroga americanum), a common cause of disease in livestock in the southern and southwestern U.S.A.","definition_xrefs":["MESH:D012610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myiasis","termid":"MONDO:0019147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"screw worm infectious disease","secondary_identifiers":["DOID:12927"],"synonyms":[{"name":"Cochliomyia hominivorax caused disease or disorder","type":"exact"},{"name":"Cochliomyia hominivorax disease or disorder","type":"exact"},{"name":"Cochliomyia hominivorax infectious disease","type":"exact"},{"name":"infection, screw worm","type":"related"},{"name":"infections, screw worm","type":"related"},{"name":"screw worm infections","type":"related"}],"termid":"MONDO:0005954","xrefs":{"Monarch":{"xref_id":"0005954"}}}


id: GO:0035094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus.","definition_xrefs":["ISBN:0198506732","GOC:ef","ISBN:0582227089","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nicotine","termid":"GO:0035094"}


id: PBO:0067161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 214, pseudogene","termid":"PBO:0067161"}


id: MONDO:0011099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Human HOXA1 syndromes is characterized by deafness, central hypoventilation, congenital ocular paralysis and developmental retardation. Cardiac anomalies and paralysis of the vocal chords may also be present. Six cases have been reported so far. Transmission is thought to be autosomal recessive.","definition_xrefs":["Orphanet:69739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"human HOXA1 syndromes","secondary_identifiers":["MEDGEN:330410","UMLS:C1832215","OMIM:601536","DOID:0050682","SCTID:720518006","GARD:8333"],"synonyms":[{"name":"ABDS","type":"related"},{"name":"ABSD","type":"exact"},{"name":"Athabascan brainstem dysgenesis syndrome","type":"exact"},{"name":"Athabaskan brainstem dysgenesis","type":"related"},{"name":"Athabaskan brainstem dysgenesis syndrome","type":"exact"},{"name":"BSAS","type":"related"},{"name":"Bosley Salih Alorainy syndrome","type":"related"},{"name":"Bosley-Salih-Alorainy syndrome","type":"related"},{"name":"Human HOXA1 syndromes","type":"related"},{"name":"Navajo brainstem syndrome","type":"exact"}],"termid":"MONDO:0011099","xrefs":{"Monarch":{"xref_id":"0011099"}}}


id: MONDO:0010047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive spastic paraplegia type 5A (SPG5A) is a form of hereditary spastic paraplegia characterized by either a pure phenotype of slowly progressive spastic paraplegia of the lower extremities with bladder dysfunction and pes cavus or a complex presentation with additional manifestations including cerebellar signs, nystagmus, distal or generalized muscle atrophy and cognitive impairment. Age of onset is highly variable, ranging from early childhood to adulthood. White matter hyperintensity and cerebellar and spinal cord atrophy may be noted, on brain magnetic resonance imaging, in some patients.","definition_xrefs":["Orphanet:100986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 5A","secondary_identifiers":["DOID:0110810","MEDGEN:376521","OMIM:270800","SCTID:763373005","GARD:4926","UMLS:C1849115"],"synonyms":[{"name":"CYP7B1 pure or complex autosomal recessive spastic paraplegia","type":"exact"},{"name":"SPG5A","type":"exact"},{"name":"autosomal recessive spastic paraplegia","type":"related"},{"name":"autosomal recessive spastic paraplegia 5A","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 5A","type":"exact"},{"name":"hereditary spastic paraplegia type 5A","type":"exact"},{"name":"pure or complex autosomal recessive spastic paraplegia caused by mutation in CYP7B1","type":"exact"},{"name":"spastic paraplegia 5A","type":"related"},{"name":"spastic paraplegia 5A, autosomal recessive","type":"related"},{"name":"spastic paraplegia type 5A","type":"related"},{"name":"spastic paraplegia type 5B, recessive","type":"exact"}],"termid":"MONDO:0010047","xrefs":{"Monarch":{"xref_id":"0010047"}}}


id: SO:0000953
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An origin of bacterial chromosome replication.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin_of_replication","termid":"SO:0000296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oriC","synonyms":[{"name":"origin of bacterial chromosome replication","type":"exact"}],"termid":"SO:0000953"}


id: MONDO:1012262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"stringhalt, non-human animal","termid":"MONDO:1011631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stringhalt, cattle","secondary_identifiers":["OMIA:000950-9913"],"termid":"MONDO:1012262","xrefs":{"Monarch":{"xref_id":"1012262"}}}


id: SO:0001355
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_methoxyuridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methoxyuridine","secondary_identifiers":["RNAMOD:063"],"synonyms":[{"name":"5-methoxyuridine","type":"exact"},{"name":"five methoxyuridine","type":"exact"},{"name":"mo5U","type":"exact"}],"termid":"SO:0001355"}


id: PBO:0056909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYC inducible lncRNA inactivating p53","termid":"PBO:0056909"}


id: PBO:0056152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule actin crosslinking factor 1","termid":"PBO:0056152"}


id: MONDO:0004316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A histologic variant of squamous cell carcinoma that arises from the skin. It is characterized by loosening of the intercellular bridges between the malignant cells which results in acantholysis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin squamous cell carcinoma","termid":"MONDO:0002529"},{"relation_name":"is_a","term_name":"keratinizing squamous cell carcinoma","termid":"MONDO:0005056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"acantholytic squamous cell skin carcinoma","secondary_identifiers":["SCTID:254654004","UMLS:C0345979","DOID:7643","MEDGEN:91065","NCIT:C4460"],"synonyms":[{"name":"acantholytic squamous cell carcinoma of skin","type":"related"},{"name":"acantholytic squamous cell carcinoma of the skin","type":"exact"},{"name":"acantholytic squamous cell skin carcinoma","type":"exact"}],"termid":"MONDO:0004316","xrefs":{"Monarch":{"xref_id":"0004316"}}}


id: PBO:0084661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial 2' O-ribose methyltransferase; required for methylation of U(2791) in 21S rRNA; MRM2 deletion confers thermosensitive respiration and loss of mitochondrial DNA; has similarity to Spb1p and Trm7p, and to E. coli FtsJ/RrmJ","termid":"PBO:0084661"}


id: PBO:0057907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3610","termid":"PBO:0057907"}


id: MONDO:0100423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly PTPN11 gene mutation. (Mutation of the protein tyrosine phosphatase, non-receptor type 11 gene. It is seen in cases of juvenile myelomonocytic leukemia.)","definition_xrefs":["NCIT:C82612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"acute myeloid leukemia, PTPN11 gene mutation","synonyms":[{"name":"AML, BPTP3 Gene Mutation","type":"exact"},{"name":"AML, PTP-1D Gene Mutation","type":"exact"},{"name":"AML, PTP2C Gene Mutation","type":"exact"},{"name":"AML, PTPN11 gene mutation","type":"exact"},{"name":"AML, Protein Tyrosine Phosphatase Non-Receptor Type 11 Gene Mutation","type":"exact"},{"name":"AML, Protein Tyrosine Phosphatase, Non-Receptor Type 11 Gene Mutation","type":"exact"},{"name":"AML, SH-PTP2 Gene Mutation","type":"exact"},{"name":"AML, SHP-2 Gene Mutation","type":"exact"},{"name":"AML, SHP2 Gene Mutation","type":"exact"}],"termid":"MONDO:0100423","xrefs":{"Monarch":{"xref_id":"0100423"}}}


id: GO:0048476
data:
  {"annotated_genes":["SJAG_01044","SJAG_00623"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[101017,116592],"is_not":false,"summary":null,"term":"GO:0048476"}]},"cv_name":"cellular_component","definition":"An endodeoxyribonuclease complex that resolves the 4-way DNA intermediates of a Holliday junction into two separate duplex DNA molecules. Can be branch-migration associated.","definition_xrefs":["PMID:11207366","PMID:12374758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endodeoxyribonuclease complex","termid":"GO:1905347"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00623":null,"SJAG_01044":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Holliday junction resolvase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Mus81-Eme1 complex","type":"narrow"},{"name":"Mus81-Eme1 holliday resolvase complex","type":"narrow"},{"name":"Mus81-Eme2 complex","type":"narrow"},{"name":"Mus81-Eme2 holliday resolvase complex","type":"narrow"},{"name":"resolvasome","type":"exact"}],"termid":"GO:0048476","terms_by_termid":{"GO:0048476":null}}


id: GO:0097495
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A trimeric protein complex made up of an H-NS homodimer and an Hha monomer. In Enterobacteriaceae, this complex negatively regulates transcription of a range of genes.","definition_xrefs":["GOC:bhm","PMID:21600204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005575","GO:0005829","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"H-NS-Hha complex","termid":"GO:0097495"}


id: GO:0042652
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The peripheral segment of respiratory chain complex I located in the mitochondrion. Respiratory chain complex I is an enzyme of the respiratory chain, consisting of at least 34 polypeptide chains. The electrons of NADH enter the chain at this complex. The complete complex is L-shaped, with a horizontal arm lying in the membrane and a vertical arm that projects into the matrix.","definition_xrefs":["GOC:jid","GOC:mtg_sensu","ISBN:0716749556"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial respiratory chain complex I, peripheral segment (obsolete GO:0042652)","synonyms":[{"name":"NADH dehydrogenase (ubiquinone) complex, peripheral segment","type":"broad"},{"name":"NADH-Q oxidoreductase complex, peripheral segment","type":"broad"}],"termid":"GO:0042652"}


id: PBO:0048191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GA binding protein transcription factor subunit alpha","termid":"PBO:0048191"}


id: MONDO:0016014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fetal minoxidil syndrome is characterized by a group of symptoms that may be observed in a fetus or newborn when the mother has taken minoxidil during pregnancy. Minoxidil is used in the treatment of malignant renal hypertension and as a topical solution to induce scalp hair growth. Hypertrichosis that gradually diminishes during the first six postnatal months has been reported. Additional reported features include cardiac (congenital great vessel transposition and pulmonary valve stenosis), neurodevelopmental (caudal regression sequence), gastrointestinal, renal, and limb malformations. Conclusive studies are however not available.","definition_xrefs":["Orphanet:1918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetal minoxidil syndrome","secondary_identifiers":["SCTID:254251003","icd11.foundation:4930572","UMLS:C0432373","GARD:2308","ICD9:760.79","MEDGEN:96601"],"synonyms":[{"name":"minoxidil antenatal exposure","type":"related"},{"name":"minoxidil antenatal infection","type":"exact"}],"termid":"MONDO:0016014","xrefs":{"Monarch":{"xref_id":"0016014"}}}


id: GO:0070328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of triglyceride within an organism or cell.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol homeostasis","termid":"GO:0055090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"triglyceride homeostasis","synonyms":[{"name":"triacylglycerol homeostasis","type":"exact"}],"termid":"GO:0070328"}


id: PBO:0067680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 865, pseudogene","termid":"PBO:0067680"}


id: PBO:0065164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich basic protein 1","termid":"PBO:0065164"}


id: PBO:0081771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 703","termid":"PBO:0081771"}


id: GO:0048799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for an animal organ to attain its fully functional state. An organ is a tissue or set of tissues that work together to perform a specific function or functions.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"animal organ maturation","termid":"GO:0048799"}


id: MONDO:0000092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pyloric stenosis, infantile (obsolete MONDO:0000092)","termid":"MONDO:0000092","xrefs":{"Monarch":{"xref_id":"0000092"}}}


id: PBO:0050365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 68","termid":"PBO:0050365"}


id: PBO:0054360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1753","termid":"PBO:0054360"}


id: PBO:0027870
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_and_delayed_cell_cycle_arrest_in_mitotic_G1_phase_in_response_to_nitrogen_starvation","termid":"PBO:0027870"}


id: GO:0015442
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + (Na+ or H+)(in) = ADP + phosphate + (Na+ or H+)(out).","definition_xrefs":["TC:3.A.2.-.-"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrogen-/sodium-translocating ATPase activity (obsolete GO:0015442)","synonyms":[{"name":"hydrogen-/sodium-translocating ATPase activity","type":"exact"},{"name":"proton-/sodium-translocating ATPase activity","type":"exact"}],"termid":"GO:0015442"}


id: GO:0031010
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any nuclear protein complex that contains an ATPase subunit of the imitation switch (ISWI) family. ISWI ATPases are involved in assembling chromatin and in sliding and spacing nucleosomes to regulate transcription of nuclear RNA polymerases I, II, and III and also DNA replication, recombination and repair.","definition_xrefs":["PMID:15020051","PMID:21810179","PMID:16568949","GOC:mah","GOC:krc","PMID:15284901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694","GO:0005634"],"is_obsolete":false,"name":"ISWI-type complex","termid":"GO:0031010"}


id: GO:0106189
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of hydrons linked to the hydrolysis of a diphosphate.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on hydrons linked to the hydrolysis of a diphosphate (obsolete GO:0106189)","termid":"GO:0106189"}


id: MOD:01142
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between a cysteine residue and the tetrapyrrole compound 15,16-dihydrobiliverdin.","definition_xrefs":["RESID:AA0428","PubMed:10430868","PubMed:3208761","PubMed:1559975","PubMed:15504407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole modified residue","termid":"MOD:00700"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-15,16-dihydrobiliverdin-L-cysteine","synonyms":[{"name":"(16R)-18-ethenyl-8,12-bis(2-carboxyethyl)-3-[(1R)-1-(((2R)-2-amino-2-carboxy)ethylsulfanyl)ethyl]-2,7,13,17-tetramethyl-15,16-dihydrobilin-1,19(21H,24H)-dione","type":"exact"},{"name":"15,16-Dhbv","type":"exact"},{"name":"15,16-dihydrobiliverdin IXalpha","type":"exact"},{"name":"15,16-dihydrobiliverdin cysteine adduct","type":"exact"},{"name":"18-ethenyl-8,12-bis(2-carboxyethyl)-3-(2-(cysteinyl-S)-ethyl)-2,7,13,17-tetramethylbiladiene-ab-1,19(16H,21H)-dione","type":"exact"},{"name":"3'-cysteinyl-15,16-dihydrobiliverdin","type":"exact"},{"name":"3alpha-cysteinyl-15,16-dihydrobiliverdin","type":"exact"},{"name":"BINDING 15,16-dihydrobiliverdin (covalent; via 1 link)","type":"exact"},{"name":"DBV","type":"exact"},{"name":"S-15,16-dihydrobiliverdin-L-cysteine","type":"exact"}],"termid":"MOD:01142"}


id: PBO:0004214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase (predicted)","termid":"PBO:0004214"}


id: PBO:0044426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 3 subfamily A member 52, pseudogene","termid":"PBO:0044426"}


id: GO:0050126
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-carbamoylputrescine + H2O + 2 H+ = CO2 + NH4 + putrescine.","definition_xrefs":["EC:3.5.1.53","RHEA:22284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"N-carbamoylputrescine amidase activity","secondary_identifiers":["MetaCyc:N-CARBAMOYLPUTRESCINE-AMIDASE-RXN","KEGG_REACTION:R01152"],"synonyms":[{"name":"N-carbamoylputrescine amidohydrolase activity","type":"related"},{"name":"NCP","type":"related"},{"name":"carbamoylputrescine hydrolase activity","type":"related"}],"termid":"GO:0050126"}


id: GO:0043100
data:
  {"annotated_genes":["SJAG_04354"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006223"}]},"cv_name":"biological_process","definition":"Any process that generates pyrimidine nucleobases, 1,3-diazine organic nitrogenous bases, from derivatives of them without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine-containing compound salvage","termid":"GO:0008655"},{"relation_name":"is_a","term_name":"pyrimidine nucleobase biosynthetic process","termid":"GO:0019856"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04354":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"pyrimidine nucleobase salvage","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine base salvage","type":"exact"}],"termid":"GO:0043100","terms_by_termid":{"GO:0006223":null}}


id: PBO:0034138
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-confers_advantage_in","termid":"PBO:0034138"}


id: PBO:0080377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS9 domain containing 1","termid":"PBO:0080377"}


id: SO:0000993
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence produced from an aligment algorithm that uses multiple sequences as input.","direct_ancestors":[{"relation_name":"is_a","term_name":"status","termid":"SO:0000905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"consensus","termid":"SO:0000993"}


id: GO:0090502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving the hydrolysis of internal 3',5'-phosphodiester bonds in one or two strands of ribonucleotides.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA phosphodiester bond hydrolysis, endonucleolytic (obsolete GO:0090502)","termid":"GO:0090502"}


id: MONDO:0859233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"junctional epidermolysis bullosa","termid":"MONDO:0017612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa, junctional 6, with pyloric atresia","secondary_identifiers":["MEDGEN:1803348","UMLS:C5676957","OMIM:619817"],"termid":"MONDO:0859233","xrefs":{"Monarch":{"xref_id":"0859233"}}}


id: PBO:0030921
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_plasmid_loss","termid":"PBO:0030921"}


id: GO:0000242
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A network of small fibers that surrounds the centrioles in cells; contains the microtubule nucleating activity of the centrosome.","definition_xrefs":["GOC:clt","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"centrosome","termid":"GO:0005813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"pericentriolar material","termid":"GO:0000242"}


id: GO:0009161
data:
  {"annotated_genes":["SJAG_00694","SJAG_00044","SJAG_02038","SJAG_04882","SJAG_02364","SJAG_00444","SJAG_01298","SJAG_01859","SJAG_00197","SJAG_03708","SJAG_04713","SJAG_04709","SJAG_03140","SJAG_01081","SJAG_03355","SJAG_03164","SJAG_01070","SJAG_01814","SJAG_06634","SJAG_04354","SJAG_01661","SJAG_04970","SJAG_04845","SJAG_03811","SJAG_04681","SJAG_04123","SJAG_01937","SJAG_04634","SJAG_00533","SJAG_02850","SJAG_04849","SJAG_00964"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102920,88355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[109855,114001,116852,109741,97296,99072,118479,102921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[88928,111404,92898,116214,97997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[101311,97622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046033"},{"annotations":[93018,116335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[67456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[115226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009398"},{"annotations":[113607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046444"},{"annotations":[59209,100691,107757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[101739,63924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046037"},{"annotations":[93236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[118480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006188"},{"annotations":[88358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046040"},{"annotations":[101312,93238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[114454,97204,109416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009156"},{"annotations":[92450,114410,87927,86942,91455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"},{"annotations":[93240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a ribonucleoside monophosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate metabolic process","termid":"GO:0009123"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00197":null,"SJAG_00444":null,"SJAG_00533":null,"SJAG_00694":null,"SJAG_00964":null,"SJAG_01070":null,"SJAG_01081":null,"SJAG_01298":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_01937":null,"SJAG_02038":null,"SJAG_02364":null,"SJAG_02850":null,"SJAG_03140":null,"SJAG_03164":null,"SJAG_03355":null,"SJAG_03708":null,"SJAG_03811":null,"SJAG_04123":null,"SJAG_04354":null,"SJAG_04634":null,"SJAG_04681":null,"SJAG_04709":null,"SJAG_04713":null,"SJAG_04845":null,"SJAG_04849":null,"SJAG_04882":null,"SJAG_04970":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"ribonucleoside monophosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"ribonucleoside monophosphate metabolism","type":"exact"}],"termid":"GO:0009161","terms_by_termid":{"GO:0006177":null,"GO:0006188":null,"GO:0006189":null,"GO:0009156":null,"GO:0009224":null,"GO:0009398":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0044205":null,"GO:0044206":null,"GO:0044208":null,"GO:0044209":null,"GO:0046033":null,"GO:0046037":null,"GO:0046040":null,"GO:0046444":null}}


id: GO:1901003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fermentation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of fermentation","termid":"GO:0043465"},{"relation_name":"negatively_regulates","term_name":"fermentation","termid":"GO:0006113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"negative regulation of fermentation","synonyms":[{"name":"down regulation of fermentation","type":"exact"},{"name":"down-regulation of fermentation","type":"exact"},{"name":"downregulation of fermentation","type":"exact"},{"name":"inhibition of fermentation","type":"narrow"}],"termid":"GO:1901003"}


id: FYPO:0003344
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed when a cell population is in stationary phase in which a cell is elongated, has two or more nuclei and more than one septum, and the septa not grouped together, but are located so as to form separate compartments with a single nucleus in each.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated multinucleate multiseptate cell, single septa between nuclei","termid":"FYPO:0003343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000032","FYPO:0000002","FYPO:0000005","FYPO:0000631"],"is_obsolete":false,"name":"elongated multinucleate multiseptate cell, single septa between nuclei, during stationary phase","synonyms":[{"name":"elongated multinucleate multiseptate cell, single septa between nuclei during stationary phase","type":"exact"},{"name":"elongated multinucleate multiseptate cell, single septa between nuclei, during stationary phase during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003344"}


id: GO:0090399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which normal somatic cells reach an irreversible stage of cell cycle arrest following multiple rounds of replication; this end stage is associated with marked changes in gene expression and function. This is a natural barrier to unlimited proliferation of somatic cells, and is believed to be contolled by telomere shortening.","definition_xrefs":["PMID:23061726","PMID:17014937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"replicative senescence","termid":"GO:0090399"}


id: PBO:0052168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 16","termid":"PBO:0052168"}


id: MONDO:0015724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-distal trisomy 13q is a rare chromosomal anomaly disorder, resulting from the partial duplication of the proximal long arm of chromosome 13, with a highly variable phenotype principally characterized by increased polymorphonuclear leucocyte projections and persistence of fetal hemoglobin, as well as growth and developmental delay and craniofacial dysmorphism (incl. microcephaly, depressed nasal bridge, stubby nose, low-set, malformed ears, cleft lip/palate, micrognathia). Strabismus, clinodactyly and undescended testes in males may also be associated.","definition_xrefs":["Orphanet:1702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 13q trisomy","termid":"MONDO:0022177"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-distal trisomy 13q","secondary_identifiers":["MEDGEN:1637117","SCTID:764996009","UMLS:C4707260","GARD:18738"],"synonyms":[{"name":"non-distal duplication 13q","type":"exact"},{"name":"non-distal trisomy type 13q","type":"exact"},{"name":"non-telomeric trisomy 13q","type":"exact"}],"termid":"MONDO:0015724","xrefs":{"Monarch":{"xref_id":"0015724"}}}


id: PBO:0012583
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G Protein Beta gene","termid":"PBO:0012583"}


id: FYPO:0002909
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"},{"relation_name":"is_a","term_name":"decreased protein localization to chromosome during vegetative growth","termid":"FYPO:0002839"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin","termid":"FYPO:0006631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to chromatin during vegetative growth","synonyms":[{"name":"decreased protein localisation to chromatin during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to chromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0002909"}


id: GO:0090733
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A extracellular matrix complex involved in cell adhesion and cell migration. Typically homotrimeric or homohexameric. In mammals, four complexes exist: Tenascin-C, Tenascin-N (also known as Tenascin-W), Tenascin-X and Tenascin-R.","definition_xrefs":["PMID:12845616","PMID:17909022","GOC:bhm","PMID:23658023","PMID:11731446"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein complex involved in cell-matrix adhesion","termid":"GO:0098637"},{"relation_name":"part_of","term_name":"collagen-containing extracellular matrix","termid":"GO:0062023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"tenascin complex","synonyms":[{"name":"Tenascin-C","type":"narrow"},{"name":"Tenascin-N","type":"narrow"},{"name":"Tenascin-R","type":"narrow"},{"name":"Tenascin-W","type":"narrow"},{"name":"Tenascin-X","type":"narrow"}],"termid":"GO:0090733"}


id: PBO:0065250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 20C","termid":"PBO:0065250"}


id: GO:0039657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts expression of genes in its host. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["VZ:1582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host gene expression","termid":"GO:0039656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host gene expression","synonyms":[{"name":"host gene expression shutoff","type":"exact"},{"name":"host gene expression shutoff by virus","type":"narrow"},{"name":"suppression by virus of host gene expression","type":"narrow"}],"termid":"GO:0039657"}


id: GO:0061268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a mesonephric interstitial fibroblast.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal interstitial fibroblast fate commitment","termid":"GO:0072153"},{"relation_name":"part_of","term_name":"mesonephric interstitial fibroblast differentiation","termid":"GO:0061266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric interstitial fibroblast fate commitment","termid":"GO:0061268"}


id: MONDO:0017856
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete ARX-related epileptic encephalopathy (obsolete MONDO:0015921)","termid":"MONDO:0015921"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked spasticity-intellectual disability-epilepsy syndrome","secondary_identifiers":["MEDGEN:1376165","UMLS:C4510949","GARD:16622","Orphanet:3175"],"termid":"MONDO:0017856","xrefs":{"Monarch":{"xref_id":"0017856"}}}


id: PBO:0073030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secernin 3","termid":"PBO:0073030"}


id: PBO:0086169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for Stt4-containing PI kinase complex localization; required for Stt4-containing phosphoinositide (PI) kinase patch assembly at plasma membrane; recruited to plasma membrane via conserved basic patch near N-terminus; exhibits synthetic lethal genetic interactions with PHO85; mutations in human homolog EFR3A implicated in autism spectrum disorders","termid":"PBO:0086169"}


id: GO:0034303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which differentiated, resting cells are formed, usually within a fruiting body by Myxobacteria. The myxospore is more resistant to high temperature, desiccation, and UV than vegetative myxobacteria.","definition_xrefs":["GOC:ds","ISBN:0122268008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myxospore formation","termid":"GO:0034303"}


id: GO:0033499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of galactose, via the intermediate UDP-galactose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose catabolic process","termid":"GO:0019388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"galactose catabolic process via UDP-galactose","secondary_identifiers":["Reactome:R-HSA-70370","MetaCyc:PWY-6317"],"synonyms":[{"name":"Leloir Pathway","type":"related"},{"name":"galactose breakdown via UDP-galactose","type":"exact"},{"name":"galactose catabolism via UDP-galactose","type":"exact"},{"name":"galactose degradation via UDP-galactose","type":"exact"}],"termid":"GO:0033499"}


id: MONDO:0018362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent idiopathic facial pain","secondary_identifiers":["UMLS:C5191641","GARD:21649","icd11.foundation:1799118131","Orphanet:398147","MEDGEN:1673850"],"synonyms":[{"name":"AFP","type":"exact"},{"name":"PIFP","type":"exact"},{"name":"atypical facial pain","type":"exact"}],"termid":"MONDO:0018362","xrefs":{"Monarch":{"xref_id":"0018362"}}}


id: FYPO:0004959
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the mitochondrion is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"},{"relation_name":"is_a","term_name":"normal mitochondrion","termid":"FYPO:0006034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal level of substance in mitochondrion","synonyms":[{"name":"normal level of substance in mitochondria","type":"exact"},{"name":"normal level of substance in mitochondrion during mitotic cell cycle","type":"related"},{"name":"normal level of substance in mitochondrion during vegetative growth","type":"exact"},{"name":"normal mitochondrial level of substance","type":"exact"}],"termid":"FYPO:0004959"}


id: GO:0072687
data:
  {"annotated_genes":["SJAG_02368","SJAG_02320","SJAG_03926","SJAG_04412","SJAG_00930","SJAG_02241","SJAG_01805","SJAG_01546","SJAG_04140","SJAG_00460","SJAG_03048","SJAG_03073","SJAG_03540","SJAG_02286","SJAG_05196","SJAG_04623","SJAG_03681","SJAG_01613","SJAG_01464","SJAG_03915","SJAG_03989","SJAG_01837","SJAG_04745"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88833,93268,94247,101849,102775,107305,110677,112716,115393,116157,118148],"is_not":false,"summary":null,"term":"GO:0072687"},{"annotations":[87227],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990574"},{"annotations":[100919,118184,116158,103038],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990385"},{"annotations":[102309,98709,90769,93269,94248,96251,93342,106582,118330,99399],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090619"}]},"cv_name":"cellular_component","definition":"A spindle that forms as part of meiosis. Several proteins, such as budding yeast Spo21p, fission yeast Spo2 and Spo13, and C. elegans mei-1, localize specifically to the meiotic spindle and are absent from the mitotic spindle.","definition_xrefs":["PMID:8027178","PMID:11408572","GOC:vw","PMID:18367542","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle","termid":"GO:0005819"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00460":null,"SJAG_00930":null,"SJAG_01464":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02241":null,"SJAG_02286":null,"SJAG_02320":null,"SJAG_02368":null,"SJAG_03048":null,"SJAG_03073":null,"SJAG_03540":null,"SJAG_03681":null,"SJAG_03915":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04140":null,"SJAG_04412":null,"SJAG_04623":null,"SJAG_04745":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"meiotic spindle","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0072687","terms_by_termid":{"GO:0072687":null,"GO:0090619":null,"GO:1990385":null,"GO:1990574":null}}


id: PBO:0111776
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yip1 family","termid":"PBO:0111776"}


id: GO:1901575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of an organic substance, any molecular entity containing carbon.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete organic substance catabolic process (obsolete GO:1901575)","synonyms":[{"name":"organic molecular entity catabolic process","type":"exact"},{"name":"organic substance breakdown","type":"exact"},{"name":"organic substance catabolism","type":"exact"},{"name":"organic substance degradation","type":"exact"}],"termid":"GO:1901575"}


id: PBO:0084704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial GTP/GDP transporter; essential for mitochondrial genome maintenance; has a role in mitochondrial iron transport; member of the mitochondrial carrier family","termid":"PBO:0084704"}


id: PBO:0055606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3044","termid":"PBO:0055606"}


id: PBO:0061181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 11-1","termid":"PBO:0061181"}


id: PATO:0000545
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000545 relative photosensitivity value (obsolete PATO:0000545)","termid":"PATO:0000545"}


id: PBO:0063456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 12","termid":"PBO:0063456"}


id: MONDO:0011788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This newly described syndrome is characterized by cloverleaf skull, limb anomalies, facial dysmorphism and multiple congenital anomalies.","definition_xrefs":["Orphanet:93267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"cloverleaf skull-multiple congenital anomalies syndrome","secondary_identifiers":["UMLS:C1846671","GARD:16811","MESH:C564611","MEDGEN:375942","OMIM:607161","SCTID:717771007"],"synonyms":[{"name":"multiple congenital anomalies syndrome with cloverleaf skull","type":"related"}],"termid":"MONDO:0011788","xrefs":{"Monarch":{"xref_id":"0011788"}}}


id: PBO:0029607
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_curved_vegetative_cell","termid":"PBO:0029607"}


id: PBO:0042608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 8","termid":"PBO:0042608"}


id: MONDO:0001125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of gonococcal epididymo-orchitis.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"},{"relation_name":"is_a","term_name":"gonococcal epididymo-orchitis","termid":"MONDO:0021158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute gonococcal epididymo-orchitis","secondary_identifiers":["DOID:10802","UMLS:C0153193","ICD9:098.13","MEDGEN:509195","SCTID:30168008"],"synonyms":[{"name":"gonococcal epididymo-orchitis (acute)","type":"exact"},{"name":"gonococcal epididymo-orchitis, acute","type":"exact"}],"termid":"MONDO:0001125","xrefs":{"Monarch":{"xref_id":"0001125"}}}


id: PR:O74874
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ccr4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-repressible alcohol dehydrogenase transcriptional effector (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC31H12.08c","synonyms":[{"name":"Spom972h-ccr4","type":"exact"},{"name":"carbon catabolite repressor protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"cytoplasmic deadenylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74874"}


id: PBO:0040263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 16 like 2","termid":"PBO:0040263"}


id: PBO:0003206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rheb GTPase Rhb1","termid":"PBO:0003206"}


id: PBO:0013022
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human DHODH","termid":"PBO:0013022"}


id: GO:0090648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the provision of a combination of complex inanimate and social stimulations in the organism's housing environment.","definition_xrefs":["PMID:25934034","GOC:sl","PMID:23644055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external stimulus","termid":"GO:0009605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to environmental enrichment","synonyms":[{"name":"response to the introduction of novel objects","type":"narrow"}],"termid":"GO:0090648"}


id: PBO:0071999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 1","termid":"PBO:0071999"}


id: MONDO:0007780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypertelorism, Teebi type (obsolete MONDO:0007780)","termid":"MONDO:0007780","xrefs":{"Monarch":{"xref_id":"0007780"}}}


id: MOD:00645
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfanyl group with an acetylsulfanyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylated residue","termid":"MOD:00394"},{"relation_name":"is_a","term_name":"S-acylated residue","termid":"MOD:00672"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-acetylated residue","synonyms":[{"name":"SAcRes","type":"exact"}],"termid":"MOD:00645"}


id: PBO:0085257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral membrane protein required for COPI vesicle fusion to the ER; mediates Sey1p-independent homotypic ER fusion; prohibits back-fusion of COPII vesicles with the ER; forms a tethering complex with Sec39p and Dsl1p that interacts with ER SNAREs Sec20p and Use1p","termid":"PBO:0085257"}


id: PBO:0084330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Killer toxin; encoded on the left arm of chromosome IX in some strains, including YJM789","termid":"PBO:0084330"}


id: FYPO:0007783
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[118797,118802],"is_not":false,"summary":null,"term":"FYPO:0007783"}],"single_locus_phenotype":[{"annotations":[118798],"is_not":false,"summary":null,"term":"FYPO:0007783"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cellular geometry scaling, by which cells normally maintain a fairly constant length:diameter (width) ratio upon changes in cell volume, does not occur.","definition_xrefs":["PomBase:mah","PMID:30664646"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal vegetative cell morphology","termid":"FYPO:0001118"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_04280":null,"SJAG_04522":null},"genotype_count":3,"genotypes_by_uniquename":{"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]},"rga6delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga6delta wee1-as8(T582G aa)","display_uniquename":"rga6delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04522","SJAG_04280","SJAG_00028"],"name":"abolished geometry scaling","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_04522"],"single_locus_genotype_uniquenames":["rga4delta"],"synonyms":[{"name":"abolished cell geometry scaling","type":"exact"},{"name":"abolished cellular geometry scaling","type":"exact"},{"name":"abolished geometry scaling during mitotic cell cycle","type":"related"},{"name":"abolished geometry scaling during vegetative growth","type":"exact"},{"name":"geometry scaling abolished","type":"exact"}],"termid":"FYPO:0007783","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0007783":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0097325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of melanocytes, resulting in the expansion of a cell population. A melanocyte is a pigment cell derived from the neural crest. It contains melanin-filled pigment granules, which give a brown to black appearance.","definition_xrefs":["CL:0000148","GOC:uh","PMID:22637532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"melanocyte proliferation","termid":"GO:0097325"}


id: FYECO:0000366
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A growth condition in which cells are grown in a medium that is not refreshed over the time before cells are assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single passage culture","termid":"FYECO:0000366"}


id: GO:0046860
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a glycosome.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisomal membrane","termid":"GO:0005778"},{"relation_name":"part_of","term_name":"glycosome","termid":"GO:0020015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005777"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005777"],"is_obsolete":false,"name":"glycosome membrane","termid":"GO:0046860"}


id: PATO:0001144
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001144 ig g concentration value (obsolete PATO:0001144)","termid":"PATO:0001144"}


id: PBO:0077780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tonsoku like, DNA repair protein","termid":"PBO:0077780"}


id: PBO:0051788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQCF5 antisense RNA 1","termid":"PBO:0051788"}


id: FYPO:0001260
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hypoxia is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA level during cellular response to hypoxia","synonyms":[{"name":"normal RNA accumulation during cellular response to hypoxia","type":"related"},{"name":"normal RNA level during cellular response to hyperoxic stress","type":"exact"},{"name":"normal RNA level during cellular response to hypoxia during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to hypoxia during vegetative growth","type":"exact"},{"name":"normal RNA level during cellular response to increased oxygen tension","type":"exact"},{"name":"normal mRNA level during cellular response to hypoxia","type":"narrow"},{"name":"normal transcript level during cellular response to hypoxia","type":"exact"}],"termid":"FYPO:0001260"}


id: GO:0061561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the trigeminal ganglion. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial ganglion formation","termid":"GO:0061560"},{"relation_name":"part_of","term_name":"trigeminal ganglion morphogenesis","termid":"GO:0061556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trigeminal ganglion formation","synonyms":[{"name":"trigeminal ganglia formation","type":"related"}],"termid":"GO:0061561"}


id: GO:0017076
data:
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id: PBO:0054806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2219","termid":"PBO:0054806"}


id: GO:0071679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a commissural neuron is directed to its target in the brain in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"commissural neuron axon guidance","synonyms":[{"name":"commissural neuron axon pathfinding","type":"exact"}],"termid":"GO:0071679"}


id: PBO:0027533
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondria_present_in_decreased_numbers_during_vegetative_growth","termid":"PBO:0027533"}


id: PBO:0041888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation channel sperm associated auxiliary subunit delta","termid":"PBO:0041888"}


id: PBO:0058411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4780","termid":"PBO:0058411"}


id: GO:1990640
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107787],"is_not":false,"summary":null,"term":"GO:1990640"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 2,4,5-trisphosphate + H2O = 1D-myo-inositol 2,4-bisphosphate + phosphate.","definition_xrefs":["PMID:15316017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate phosphatase activity","termid":"GO:0046030"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"inositol-2,4,5-triphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990640","terms_by_termid":{"GO:1990640":null}}


id: SO:1001268
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A site in an mRNA sequence that stimulates the recoding of a region in the same mRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_region","termid":"SO:0000836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recoding_stimulatory_region","synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:recoding_stimulatory_region","type":"exact"},{"name":"recoding stimulatory region","type":"exact"},{"name":"recoding stimulatory signal","type":"exact"}],"termid":"SO:1001268"}


id: GO:0046262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of nitrotoluene, any methylbenzene molecule with NO2 group(s) attached.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nitrotoluene biosynthetic process (obsolete GO:0046262)","synonyms":[{"name":"nitrotoluene anabolism","type":"exact"},{"name":"nitrotoluene biosynthesis","type":"exact"},{"name":"nitrotoluene biosynthetic process","type":"exact"},{"name":"nitrotoluene formation","type":"exact"},{"name":"nitrotoluene synthesis","type":"exact"}],"termid":"GO:0046262"}


id: PBO:0055489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2923","termid":"PBO:0055489"}


id: PBO:0050613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 6","termid":"PBO:0050613"}


id: FYPO:0006012
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is elongated, and does not form a mating projection under conditions that normally induce shmooing.","definition_xrefs":["PMID:28410370","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished shmoo formation","termid":"FYPO:0000569"},{"relation_name":"is_a","term_name":"elongated cell during nitrogen starvation","termid":"FYPO:0000998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000005","FYPO:0000002","FYPO:0000301"],"is_obsolete":false,"name":"elongated cell with abolished shmoo formation","synonyms":[{"name":"elongated cell with abolished shmoo formation during nitrogen starvation","type":"exact"},{"name":"elongated non-mated cell","type":"related"},{"name":"large non-mated cells","type":"related"}],"termid":"FYPO:0006012"}


id: PBO:0075881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3 beta-galactoside alpha-2,3-sialyltransferase 6","termid":"PBO:0075881"}


id: MONDO:0032629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 25","secondary_identifiers":["UMLS:C4748806","DOID:0112067","MEDGEN:1648366","OMIM:618246","GARD:16329"],"synonyms":[{"name":"MC1DN25","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 25","type":"related"}],"termid":"MONDO:0032629","xrefs":{"Monarch":{"xref_id":"0032629"}}}


id: PBO:0091050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"initiator methionine tRNA 2'-O-ribosyl phosphate transferase","termid":"PBO:0091050"}


id: MONDO:0020373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset partial cataract","termid":"MONDO:0020377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"early-onset anterior polar cataract","secondary_identifiers":["Orphanet:98988","MEDGEN:340806","GARD:1140","UMLS:C1855179"],"synonyms":[{"name":"cataract anterior polar","type":"related"},{"name":"early-onset anterior subcapsular cataract","type":"exact"}],"termid":"MONDO:0020373","xrefs":{"Monarch":{"xref_id":"0020373"}}}


id: PBO:0050013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, A","termid":"PBO:0050013"}


id: FYPO:0007515
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which RNA stability is decreased during a cellular response to oxidative stress. RNA molecules are more likely to degrade over a given time period than in wild type. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PMID:14633985","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA stability","termid":"FYPO:0003038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA stability during cellular response to oxidative stress","synonyms":[{"name":"decreased RNA stability during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"decreased RNA stability during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"decreased RNA stability in response to oxidative stress","type":"exact"},{"name":"reduced RNA stability during cellular response to oxidative stress","type":"exact"}],"termid":"FYPO:0007515"}


id: GO:0015400
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of ammonium from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters. In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete low-affinity secondary active ammonium transmembrane transporter activity (obsolete GO:0015400)","synonyms":[{"name":"low affinity ammonium transmembrane transporter activity","type":"related"},{"name":"low affinity secondary active ammonium transmembrane transporter activity","type":"exact"}],"termid":"GO:0015400"}


id: GO:0102626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-costunolide + O2 + reduced [NADPH--hemoprotein reductase] = H+ + H2O + oxidized [NADPH--hemoprotein reductase] + parthenolide.","definition_xrefs":["RHEA:61320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"parthenolide synthase activity","secondary_identifiers":["MetaCyc:RXN-15531"],"termid":"GO:0102626"}


id: PBO:0040150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASH1L intronic transcript 1","termid":"PBO:0040150"}


id: MONDO:0013738
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive nonsyndromic deafness that has material basis in variation in the chromosome region 1p36.31-p36.13.","definition_xrefs":["DOID:0110538","PMID:21937999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 96","secondary_identifiers":["GARD:22642","OMIM:614414","UMLS:C3888337","MEDGEN:854865"],"synonyms":[{"name":"DFNB96","type":"narrow"},{"name":"autosomal recessive deafness 96","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 96","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 96","type":"narrow"},{"name":"deafness, autosomal recessive 96","type":"narrow"}],"termid":"MONDO:0013738","xrefs":{"Monarch":{"xref_id":"0013738"}}}


id: MONDO:0015550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of epidermolysis bullosa simplex in which blistering occurs above the basal keratinocytes.","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex","termid":"MONDO:0017610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"suprabasal epidermolysis bullosa simplex","secondary_identifiers":["SCTID:724840004","UMLS:C4511300","icd11.foundation:1980336421","Orphanet:158661","MEDGEN:1388459"],"synonyms":[{"name":"epidermis suprabasal layer epidermolysis bullosa simplex","type":"exact"},{"name":"epidermolysis bullosa simplex of epidermis suprabasal layer","type":"exact"}],"termid":"MONDO:0015550","xrefs":{"Monarch":{"xref_id":"0015550"}}}


id: PBO:0085261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral protein of cytosolic face of mitochondrial outer membrane; required for mitochondrial fission; interacts with Fis1p and with the self-assembled oligomeric form of the dynamin-related GTPase Dnm1p; contains WD repeats; MDV1 has a paralog, CAF4, that arose from the whole genome duplication","termid":"PBO:0085261"}


id: PBO:0047650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 4 pseudogene 6","termid":"PBO:0047650"}


id: GO:0018441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a 8Fe-7S iron-sulfur cluster via hexakis-L-cysteinyl L-serinyl octairon heptasulfide, found in nitrogenase.","definition_xrefs":["PMID:9063865","RESID:AA0300"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via hexakis-L-cysteinyl L-serinyl octairon heptasulfide (obsolete GO:0018441)","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via hexakis-L-cysteinyl L-serinyl octairon heptasulphide","type":"exact"}],"termid":"GO:0018441"}


id: GO:0097632
data:
  {"annotated_genes":["SJAG_02699"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94107],"is_not":false,"summary":null,"term":"GO:0097632"}]},"cv_name":"cellular_component","definition":"The component of the phagophore assembly site membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"phagophore assembly site membrane","termid":"GO:0034045"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0000407"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0000407","GO:0005737"],"is_obsolete":false,"name":"extrinsic component of phagophore assembly site membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"extrinsic component of pre-autophagosomal structure membrane","type":"narrow"},{"name":"extrinsic to phagophore assembly site membrane","type":"exact"},{"name":"phagophore assembly site peripheral membrane","type":"related"}],"termid":"GO:0097632","terms_by_termid":{"GO:0097632":null}}


id: FYPO:0004358
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein phosphatase activity is increased during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphatase activity","termid":"FYPO:0001758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"increased protein phosphatase activity during mitosis","synonyms":[{"name":"increased phosphoprotein phosphatase activity during mitosis","type":"exact"},{"name":"increased protein phosphatase activity during mitotic M phase","type":"related"},{"name":"increased protein phosphatase activity during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0004358"}


id: PBO:0057343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 527","termid":"PBO:0057343"}


id: MONDO:0024474
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A precancerous neoplastic process that affects the squamous, glandular, or transitional cell epithelium without evidence of invasion. According to the degree of nuclear atypia, number of mitotic figures, and presence of architectural distortion, it is classified as low grade (mild dysplasia) or high grade (moderate or severe dysplasia).","definition_xrefs":["NCIT:C8366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"},{"relation_name":"is_a","term_name":"precancerous condition","termid":"MONDO:0021074"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraepithelial neoplasia","secondary_identifiers":["MEDGEN:164203","UMLS:C0878500"],"synonyms":[{"name":"epithelial dysplasia","type":"exact"},{"name":"intraepithelial neoplasia","type":"exact"},{"name":"intraepithelial neoplasm","type":"exact"}],"termid":"MONDO:0024474","xrefs":{"Monarch":{"xref_id":"0024474"}}}


id: FYPO:0005314
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at promoters that contain MCB sites is decreased.","definition_xrefs":["PMID:26912660","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin at promoter","termid":"FYPO:0007505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to chromatin at MCB promoters during vegetative growth","synonyms":[{"name":"decreased protein localisation to chromatin at MCB promoters during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at MCB promoters during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at MCB target genes during vegetative growth","type":"related"},{"name":"decreased protein localization to chromatin at MCB-containing promoters during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at MCB promoters during vegetative growth","type":"exact"}],"termid":"FYPO:0005314"}


id: PATO:0000676
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000676 relative temperature value (obsolete PATO:0000676)","termid":"PATO:0000676"}


id: GO:0110003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving tRNA C5-cytosine methylation.","definition_xrefs":["GOC:vw","PMID:23074192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tRNA methylation","termid":"GO:0110002"},{"relation_name":"regulates","term_name":"tRNA C5-cytosine methylation","termid":"GO:0002946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"regulation of tRNA C5-cytosine methylation","termid":"GO:0110003"}


id: GO:2000763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of transcription from RNA polymerase II promoter that is involved in norepinephrine biosynthetic process.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in norepinephrine biosynthetic process (obsolete GO:2000763)","synonyms":[{"name":"positive regulation of transcription from Pol II promoter involved in levarterenol biosynthesis","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in levarterenol biosynthetic process","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in noradrenaline biosynthesis","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in noradrenaline biosynthetic process","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in norepinephrine anabolism","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in norepinephrine biosynthesis","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in norepinephrine biosynthetic process","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in norepinephrine formation","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in norepinephrine synthesis","type":"exact"}],"termid":"GO:2000763"}


id: PBO:0038431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aladin WD repeat nucleoporin","termid":"PBO:0038431"}


id: SO:0000269
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a serine anticodon, and a 3' serine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"serine_tRNA_primary_transcript","termid":"SO:0000226"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seryl_tRNA","synonyms":[{"name":"seryl tRNA","type":"exact"},{"name":"seryl-transfer RNA","type":"exact"},{"name":"seryl-transfer ribonucleic acid","type":"related"}],"termid":"SO:0000269"}


id: MONDO:0019288
data:
  {"annotated_genes":["SJAG_03497","SJAG_00938","SJAG_01111","SJAG_04380","SJAG_03011","SJAG_03960","SJAG_02453","SJAG_00108","SJAG_02978","SJAG_04213","SJAG_00115"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007483"},{"annotations":[85390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014169"},{"annotations":[86513,86514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008962"},{"annotations":[85609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014885"},{"annotations":[85469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011997"},{"annotations":[86562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011683"},{"annotations":[84632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014070"},{"annotations":[85608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014886"},{"annotations":[86798,86797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024517"}]},"cv_name":"mondo","definition":"A pigmentation disease that involves the zone of skin.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00115":null,"SJAG_00938":null,"SJAG_01111":null,"SJAG_02453":null,"SJAG_02978":null,"SJAG_03011":null,"SJAG_03497":null,"SJAG_03960":null,"SJAG_04213":null,"SJAG_04380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"skin pigmentation disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:709.09","NCIT:C34557","DOID:10123","MEDGEN:316465","MESH:D010859","Orphanet:79374","UMLS:C1704421"],"synonyms":[{"name":"pigmentation anomaly of the skin","type":"exact"},{"name":"pigmentation disease","type":"related"},{"name":"pigmentation disease of zone of skin","type":"exact"},{"name":"zone of skin pigmentation disease","type":"exact"}],"termid":"MONDO:0019288","terms_by_termid":{"MONDO:0007483":null,"MONDO:0008962":null,"MONDO:0011683":null,"MONDO:0011997":null,"MONDO:0014070":null,"MONDO:0014169":null,"MONDO:0014885":null,"MONDO:0014886":null,"MONDO:0024517":null},"xrefs":{"Monarch":{"xref_id":"0019288"}}}


id: GO:0070014
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses oligo-1,6-glucosidase activity; the complex is a heterodimer located in the cell membrane, and is formed by proteolytic cleavage of a single precursor polypeptide. The two subunits have different substrate specificities.","definition_xrefs":["PMID:3366777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"glucosidase complex","termid":"GO:1902687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"sucrase-isomaltase complex","secondary_identifiers":["Wikipedia:Sucrase-isomaltase"],"synonyms":[{"name":"oligo-1,6-glucosidase complex","type":"related"}],"termid":"GO:0070014"}


id: MONDO:0001687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"diabetic cataract","secondary_identifiers":["MEDGEN:507634","ICD9:366.41","DOID:13328","SCTID:43959009","UMLS:C0011876","icd11.foundation:340836242"],"synonyms":[{"name":"cataract - diabetic","type":"exact"}],"termid":"MONDO:0001687","xrefs":{"Monarch":{"xref_id":"0001687"}}}


id: PBO:0050782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 1F","termid":"PBO:0050782"}


id: GO:1990605
data:
  {"annotated_genes":["SJAG_05214"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95550],"is_not":false,"summary":null,"term":"GO:1990605"}]},"cv_name":"molecular_function","definition":"Binding to an RNA molecule containing GU repeats.","definition_xrefs":["PMID:20081200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05214":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"GU repeat RNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990605","terms_by_termid":{"GO:1990605":null}}


id: MONDO:0971080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Grisel syndrome","secondary_identifiers":["Orphanet:662255"],"termid":"MONDO:0971080","xrefs":{"Monarch":{"xref_id":"0971080"}}}


id: PBO:0061355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 13","termid":"PBO:0061355"}


id: GO:0034956
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: diphenyl ether + NADH + O2 + H+ = phenol + catechol + NAD+.","definition_xrefs":["UM-BBD_reactionID:r1453"],"gene_count":0,"genotype_count":0,"name":"obsolete diphenyl ether 1,2-dioxygenase activity (obsolete GO:0034956)","termid":"GO:0034956"}


id: _global:has_component_activity
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"has_component_process","termid":"_global:has_component_process"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_component_activity","secondary_identifiers":["RO:0002017"],"termid":"_global:has_component_activity"}


id: GO:0060184
data:
  {"annotated_genes":["SJAG_00457","SJAG_04682","SJAG_03048","SJAG_03501","SJAG_04332","SJAG_04813","SJAG_03371","SJAG_02404","SJAG_05288","SJAG_01311","SJAG_01401","SJAG_00145","SJAG_02723","SJAG_03486","SJAG_01956"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94639,108533,89822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051728"},{"annotations":[103945,101865,105460,105302,106138,108755,117863],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0110045"},{"annotations":[115982,117729],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140648"},{"annotations":[101122,94029,101889,108535,104406],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0110044"}]},"cv_name":"biological_process","definition":"The process in which a cell switches cell cycle mode.","definition_xrefs":["GOC:tb","GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00457":null,"SJAG_01311":null,"SJAG_01401":null,"SJAG_01956":null,"SJAG_02404":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03371":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_04332":null,"SJAG_04682":null,"SJAG_04813":null,"SJAG_05288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"cell cycle switching","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0060184","terms_by_termid":{"GO:0051728":null,"GO:0110044":null,"GO:0110045":null,"GO:0140648":null}}


id: PBO:0057691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1281","termid":"PBO:0057691"}


id: PBO:0044947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase pseudogene 2","termid":"PBO:0044947"}


id: GO:0080008
data:
  {"annotated_genes":["SJAG_01480","SJAG_03454","SJAG_04574","SJAG_00341","SJAG_01540","SJAG_03417","SJAG_02119","SJAG_00756","SJAG_04540","SJAG_03680","SJAG_04087","SJAG_01573","SJAG_03130"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87833,90342,90390,96169,96212,104832,110750],"is_not":false,"summary":null,"term":"GO:0080008"},{"annotations":[118305,109970,93830,117190,96211,113474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043494"},{"annotations":[110637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031464"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex in which a cullin from the Cul4 family and a RING domain protein form the catalytic core; substrate specificity is conferred by an adaptor protein.","definition_xrefs":["PMID:18552200","PMID:16792691","PMID:18223036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cullin-RING ubiquitin ligase complex","termid":"GO:0031461"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00341":null,"SJAG_00756":null,"SJAG_01480":null,"SJAG_01540":null,"SJAG_01573":null,"SJAG_02119":null,"SJAG_03130":null,"SJAG_03417":null,"SJAG_03454":null,"SJAG_03680":null,"SJAG_04087":null,"SJAG_04540":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Cul4-RING E3 ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0080008","terms_by_termid":{"GO:0031464":null,"GO:0043494":null,"GO:0080008":null}}


id: FYPO:0004383
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle begins earlier than normal.","definition_xrefs":["PMID:20935472","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle","termid":"FYPO:0002824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"premature protein localization to mitotic spindle","synonyms":[{"name":"advanced protein localization to mitotic spindle","type":"exact"},{"name":"precocious protein localization to mitotic spindle","type":"related"},{"name":"premature protein localisation to mitotic spindle","type":"exact"},{"name":"premature protein localization to mitotic spindle during mitotic cell cycle","type":"related"},{"name":"premature protein localization to spindle during mitosis","type":"exact"},{"name":"premature protein localization to spindle during vegetative growth","type":"exact"}],"termid":"FYPO:0004383"}


id: MONDO:0015554
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"maculopapular cutaneous mastocytosis","termid":"MONDO:0019316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"typical urticaria pigmentosa","secondary_identifiers":["GARD:20033","MEDGEN:1843439","UMLS:C5680683","Orphanet:158766"],"termid":"MONDO:0015554","xrefs":{"Monarch":{"xref_id":"0015554"}}}


id: PBO:0061303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminopeptidase puromycin sensitive","termid":"PBO:0061303"}


id: FYPO:0007618
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the export of protein from the nucleus begins later than normal. Export of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein export from nucleus during vegetative growth","termid":"FYPO:0000345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of protein export from nucleus","synonyms":[{"name":"delayed onset of protein export from nucleus during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein export from nucleus during vegetative growth","type":"exact"},{"name":"delayed protein export from nucleus","type":"exact"}],"termid":"FYPO:0007618"}


id: FYPO:0003390
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found at the medial cortex is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"protein mislocalized to medial cortex during vegetative growth","synonyms":[{"name":"ectopic protein localization to medial cortex during vegetative growth","type":"exact"},{"name":"protein mislocalised to medial cortex during vegetative growth","type":"exact"},{"name":"protein mislocalized to medial cortex during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003390"}


id: MONDO:0024663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant dermis tumor","termid":"MONDO:0003363"},{"relation_name":"is_a","term_name":"skin meningioma","termid":"MONDO:0004429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"primary skin meningioma","secondary_identifiers":["UMLS:C1335481","MEDGEN:235494","NCIT:C5277"],"synonyms":[{"name":"primary cutaneous meningioma","type":"exact"},{"name":"primary meningioma of skin","type":"exact"},{"name":"primary meningioma of the skin","type":"exact"},{"name":"primary skin meningioma","type":"exact"}],"termid":"MONDO:0024663","xrefs":{"Monarch":{"xref_id":"0024663"}}}


id: GO:0072186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the metanephric cap are generated and organized. The metanephric cap is formed by the condensation of metanephric mesenchymal cells surrounding the ureteric bud tip.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metanephric mesenchyme morphogenesis","termid":"GO:0072133"},{"relation_name":"part_of","term_name":"metanephric cap development","termid":"GO:0072185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric cap morphogenesis","termid":"GO:0072186"}


id: PBO:0056768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 21A, HSPA lysine","termid":"PBO:0056768"}


id: GO:0032161
data:
  {"annotated_genes":["SJAG_03374","SJAG_04703","SJAG_01658","SJAG_01769","SJAG_04566","SJAG_00118","SJAG_04375","SJAG_02645","SJAG_03703","SJAG_00663","SJAG_01277","SJAG_03688","SJAG_04470"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[117370,118132,112264,101264,103417,107442,97308,99605,97384,100455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036391"},{"annotations":[99611,93988,115466,105499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032169"}]},"cv_name":"cellular_component","definition":"Any of a series of structures composed of septins and septin-associated proteins localized to the cleavage plane which are involved in cytokinesis.","definition_xrefs":["GOC:krc","PMID:16009555","PMID:15774761","PMID:12101122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell cortex","termid":"GO:0005938"},{"relation_name":"part_of","term_name":"cell division site","termid":"GO:0032153"},{"relation_name":"part_of","term_name":"septin cytoskeleton","termid":"GO:0032156"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_00663":null,"SJAG_01277":null,"SJAG_01658":null,"SJAG_01769":null,"SJAG_02645":null,"SJAG_03374":null,"SJAG_03688":null,"SJAG_03703":null,"SJAG_04375":null,"SJAG_04470":null,"SJAG_04566":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005938"],"is_obsolete":false,"name":"cleavage apparatus septin structure","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032161","terms_by_termid":{"GO:0032169":null,"GO:0036391":null}}


id: MONDO:0002563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A somatostatin-producing neuroendocrine tumor that arises from the jejunum. It is characterized by the presence of tubulo-glandular structures.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"jejunal cancer","termid":"MONDO:0006815"},{"relation_name":"is_a","term_name":"jejunal neuroendocrine tumor, well differentiated, low or intermediate grade","termid":"MONDO:0015064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"jejunal somatostatinoma","secondary_identifiers":["DOID:3216","NCIT:C5787","MEDGEN:233585","UMLS:C1334297"],"synonyms":[{"name":"Delta cell tumor of jejunum","type":"exact"},{"name":"Delta cell tumor of the jejunum","type":"exact"},{"name":"Delta cell tumour of jejunum","type":"exact"},{"name":"Delta cell tumour of the jejunum","type":"exact"},{"name":"Somatosatinoma of jejunum","type":"exact"},{"name":"Somatosatinoma of the jejunum","type":"exact"},{"name":"jejunal delta cell somatostatin producing tumor","type":"exact"},{"name":"jejunal delta cell somatostatin producing tumour","type":"exact"},{"name":"jejunal somatostatin producing tumor","type":"exact"},{"name":"jejunal somatostatin producing tumour","type":"exact"},{"name":"jejunal somatostatin-producing NET","type":"exact"},{"name":"jejunal somatostatin-producing neuroendocrine tumor","type":"exact"},{"name":"jejunal somatostatin-producing neuroendocrine tumour","type":"exact"}],"termid":"MONDO:0002563","xrefs":{"Monarch":{"xref_id":"0002563"}}}


id: PBO:0087559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of signal peptidase complex; complex catalyzes cleavage of N-terminal signal sequences of proteins targeted to the secretory pathway; homologous to mammalian SPC22/23; other members of the complex are Spc1p, Spc2p, and Sec11p","termid":"PBO:0087559"}


id: PBO:0002172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit A/ SAGA complex subunit","termid":"PBO:0002172"}


id: PBO:0089577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTREC (exosome adaptor) complex RNA helicase subunit Mtl1","termid":"PBO:0089577"}


id: PR:P87126
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.11c","synonyms":[{"name":"Spom972h-cwf2","type":"exact"},{"name":"complexed with cdc5 protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pre-mRNA-processing protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87126"}


id: PBO:0001743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial fusion and transport protein Ugo1 (predicted)","termid":"PBO:0001743"}


id: PBO:0053345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 226","termid":"PBO:0053345"}


id: MONDO:1010156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachydactyly that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly, non-human animal","secondary_identifiers":["OMIA:000146"],"termid":"MONDO:1010156","xrefs":{"Monarch":{"xref_id":"1010156"}}}


id: PBO:0089306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCAD1 family ATPase Fft1","termid":"PBO:0089306"}


id: PBO:0042613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 13","termid":"PBO:0042613"}


id: GO:0030788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + precorrin-2 = S-adenosyl-L-homocysteine + H+ + precorrin-3A.","definition_xrefs":["EC:2.1.1.130","RHEA:16841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"precorrin-2 C20-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.130-RXN","KEGG_REACTION:R03948"],"synonyms":[{"name":"S-adenosyl-L-methionine--precorrin-2 methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:precorrin-4 C20-methyltransferase activity","type":"related"}],"termid":"GO:0030788"}


id: PBO:0042255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 2","termid":"PBO:0042255"}


id: PATO:0001591
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface shape quality inhering in a bearer by virtue of the bearer's exhibiting a degree of bending.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curvature","termid":"PATO:0001591"}


id: GO:0019030
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles; the subunits are arranged to form an icosahedron, a solid with 20 faces and 12 vertices. Icosahedral capsids have 12 pentamers plus 10(T-1) hexamers, where T is the triangulation number. Tobacco satellite necrosis virus has such a capsid structure.","definition_xrefs":["ISBN:071673706X","ISBN:0198506732","VZ:885","Wikipedia:Capsid","GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral capsid","termid":"GO:0019028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"icosahedral viral capsid","synonyms":[{"name":"quasispherical viral capsid","type":"exact"}],"termid":"GO:0019030"}


id: PBO:0088425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP binding superfamily, implicated in heme catabolism","termid":"PBO:0088425"}


id: GO:1990706
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex involved in the assembly of the mitotic checkpoint complex that in turn inhibits the anaphase promoting complex/cyclosome (APC/C).","definition_xrefs":["PMID:22898774","GOC:bhm","intAct:EBI-10691224","PMID:22493223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MAD1 complex","synonyms":[{"name":"MAD1 homodimer","type":"exact"}],"termid":"GO:1990706"}


id: PBO:0054851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2265","termid":"PBO:0054851"}


id: FYPO:0006366
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A meiosis phenotype in which meiotic telomere clustering does not occur. Meiotic telomere clustering is the dynamic reorganization of telomeres in early meiotic prophase, during which meiotic chromosome ends are gathered in a bouquet arrangement at the inner surface of the nuclear envelope proximal to the spindle pole body.","definition_xrefs":["PMID:24954111","PomBase:mah","GO:0045141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic telomere clustering","termid":"FYPO:0000172"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0000641","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished meiotic telomere clustering","synonyms":[{"name":"abolished bouquet formation","type":"exact"},{"name":"meiotic telomere clustering abolished","type":"exact"}],"termid":"FYPO:0006366"}


id: GO:0050016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: kynurenate + donor-H2 + O2 = 7,8-dihydro-7,8-dihydroxykynurenate + acceptor.","definition_xrefs":["EC:1.14.99.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"kynurenine 7,8-hydroxylase activity","secondary_identifiers":["MetaCyc:KYNURENINE-78-HYDROXYLASE-RXN","RHEA:11968"],"synonyms":[{"name":"kynurenate 7,8-hydroxylase activity","type":"related"},{"name":"kynurenate,hydrogen-donor:oxygen oxidoreductase (hydroxylating)","type":"related"},{"name":"kynurenic acid hydroxylase activity","type":"related"},{"name":"kynurenic hydroxylase activity","type":"related"}],"termid":"GO:0050016"}


id: PBO:0056678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myocyte enhancer factor 2C","termid":"PBO:0056678"}


id: MONDO:0020626
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete yt blood group antigen (obsolete MONDO:0020626)","secondary_identifiers":["OMIM:112100"],"synonyms":[{"name":"Cartwright Antigen","type":"related"},{"name":"YT BLOOD GROUP ANTIGEN","type":"related"},{"name":"blood group, Yt system","type":"exact"}],"termid":"MONDO:0020626","xrefs":{"Monarch":{"xref_id":"0020626"}}}


id: MONDO:0005487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder in which the individual suffers from both symptoms that qualify as schizophrenia and symptoms that qualify as a mood disorder (e.g., depression or bipolar disorder) for a substantial portion (but not all) of the active period of the illness; for the remainder of the active period of the illness, the individual suffers from delusions or hallucinations in the absence of prominent mood symptoms.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"psychotic disorder","termid":"MONDO:0005485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"schizoaffective disorder","secondary_identifiers":["EFO:0005411","icd11.foundation:106339515","ICD9:295.7","MEDGEN:11334","DOID:5418","NCIT:C94378","UMLS:C0036337"],"termid":"MONDO:0005487","xrefs":{"Monarch":{"xref_id":"0005487"}}}


id: PBO:0040595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 associated agonist of cell death","termid":"PBO:0040595"}


id: MONDO:0044871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"focal dystonia","termid":"MONDO:0000477"},{"relation_name":"is_a","term_name":"inherited dystonia","termid":"MONDO:0044807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"dystonia, focal, task-specific","secondary_identifiers":["MEDGEN:370752","OMIM:611284","GARD:6458","UMLS:C1969807","MESH:C566973","SCTID:230330004"],"synonyms":[{"name":"FTSD","type":"exact"},{"name":"dystonia, focal, task-specific","type":"exact"},{"name":"focal hand dystonia","type":"related"},{"name":"focal task-specific dystonia","type":"related"},{"name":"musician's cramp","type":"exact"},{"name":"musician's dystonia","type":"related"},{"name":"occupational cramp","type":"related"},{"name":"occupational dystonia","type":"related"},{"name":"task-specific dystonia","type":"related"},{"name":"task-specific focal dystonia","type":"related"}],"termid":"MONDO:0044871","xrefs":{"Monarch":{"xref_id":"0044871"}}}


id: GO:1901621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of smoothened signaling pathway involved in dorsal/ventral neural tube patterning.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smoothened signaling pathway","termid":"GO:0045879"},{"relation_name":"is_a","term_name":"regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","termid":"GO:1901620"},{"relation_name":"negatively_regulates","term_name":"smoothened signaling pathway involved in dorsal/ventral neural tube patterning","termid":"GO:0060831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","synonyms":[{"name":"down regulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"down regulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"down regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"down regulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"down-regulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"down-regulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"down-regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"down-regulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"downregulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"downregulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"downregulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"downregulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"inhibition of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"inhibition of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"inhibition of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"inhibition of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"negative regulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"negative regulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"negative regulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"}],"termid":"GO:1901621"}


id: GO:0034050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell death resulting from activation of endogenous cellular processes after interaction with a symbiont (defined as the smaller of two, or more, organisms engaged in symbiosis, a close interaction encompassing mutualism through parasitism). This can be triggered by direct interaction with the organism, for example, contact with penetrating hyphae of a fungus; or an indirect interaction such as symbiont-secreted molecules.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"},{"relation_name":"is_a","term_name":"defense response to symbiont","termid":"GO:0140546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-induced defense-related programmed cell death","synonyms":[{"name":"host programmed cell death induced by symbiont","type":"exact"},{"name":"programmed cell death induced by symbiont","type":"exact"}],"termid":"GO:0034050"}


id: MONDO:1012769
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cancer that occurs in pigs due to a mutation in the TP53 gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"cancer, pig","termid":"MONDO:1012572"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer, TP53-related, pig","secondary_identifiers":["OMIA:001990-9823"],"termid":"MONDO:1012769","xrefs":{"Monarch":{"xref_id":"1012769"}}}


id: GO:0048055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the R2 and R5 pair of photoreceptors in the eye over time, from their formation to the mature structures. R2 and R5 are paired photoreceptors that contribute to the outer rhabdomeres. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor development","termid":"GO:0042051"},{"relation_name":"part_of","term_name":"R2/R5 cell differentiation","termid":"GO:0048054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R2/R5 development","termid":"GO:0048055"}


id: PBO:0110487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKCSH beta subunit of glucosidase II","termid":"PBO:0110487"}


id: PBO:0069752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1035, pseudogene","termid":"PBO:0069752"}


id: MONDO:0010687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nephrolithiasis","termid":"MONDO:0008171"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrolithiasis, X-linked recessive, with renal failure","secondary_identifiers":["MEDGEN:96047","UMLS:C0403720","GARD:15305","SCTID:236713006","DOID:0111798","MESH:C562901","OMIM:310468"],"synonyms":[{"name":"XRN","type":"related"},{"name":"nephrolithiasis 1","type":"related"},{"name":"nephrolithiasis, X-linked recessive, type 1","type":"related"},{"name":"nephrolithiasis, X-linked recessive, with renal failure","type":"exact"},{"name":"nephrolithiasis, type i, X-linked recessive","type":"exact"},{"name":"urolithiasis, X-linked recessive, type 1","type":"related"}],"termid":"MONDO:0010687","xrefs":{"Monarch":{"xref_id":"0010687"}}}


id: PR:O14104
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lys12 gene.","definition_xrefs":["UniProtKB:O14104","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoisocitrate dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.04","synonyms":[{"name":"HICDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lys12","type":"exact"}],"termid":"PR:O14104"}


id: FYPO:0003065
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the microtubule cytoskeleton is abnormal during conjugation with cellular fusion.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology","termid":"FYPO:0003064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0000002","FYPO:0001985","FYPO:0002399"],"is_obsolete":false,"name":"abnormal microtubule cytoskeleton morphology during mating","synonyms":[{"name":"abnormal microtubule cytoskeleton morphology during conjugation with cellular fusion","type":"exact"},{"name":"abnormal microtubule cytoskeleton morphology during karyogamy","type":"related"}],"termid":"FYPO:0003065"}


id: MONDO:0044311
data:
  {"annotated_genes":["SJAG_02682","SJAG_03568","SJAG_01632"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86170,86171,86172],"is_not":false,"summary":null,"term":"MONDO:0044311"}]},"cv_name":"mondo","definition":"BTDD is an autosomal dominant disorder characterized by brachycephaly, trichomegaly, and developmental delay. Although it is caused by dysfunction of the ribosome, patients do not have anemia (summary by {2:Paolini et al., 2017}).","definition_xrefs":["OMIM:617412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01632":null,"SJAG_02682":null,"SJAG_03568":null},"genotype_count":0,"is_obsolete":false,"name":"brachycephaly, trichomegaly, and developmental delay","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1374289","UMLS:C4479431","DOID:0070415"],"synonyms":[{"name":"BTDD","type":"related"},{"name":"Macinnes syndrome","type":"related"},{"name":"brachycephaly, trichomegaly, and developmental delay","type":"exact"}],"termid":"MONDO:0044311","terms_by_termid":{"MONDO:0044311":null},"xrefs":{"Monarch":{"xref_id":"0044311"}}}


id: MONDO:0019858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic congenital hypothyroidism is a type of primary congenital hypothyroidism whose cause and prevalence are unknown.","definition_xrefs":["Orphanet:95717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypothyroidism","termid":"MONDO:0018612"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic congenital hypothyroidism","secondary_identifiers":["UMLS:C4273913","GARD:19298","SCTID:717334008","MEDGEN:901252"],"termid":"MONDO:0019858","xrefs":{"Monarch":{"xref_id":"0019858"}}}


id: PBO:0041686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcitonin related polypeptide alpha","termid":"PBO:0041686"}


id: PBO:0085686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in recovery from arrest in response to pheromone; acts in a cell cycle arrest recovery pathway independent from Far1p; interacts with Far3p, Far7p, Far9p, Far10p, and Far11p","termid":"PBO:0085686"}


id: GO:0010206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Proteolysis of the damaged D1 protein and re-assembly of a new D1 subunit in the photosystem II following photoinhibition.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein repair","termid":"GO:0030091"},{"relation_name":"part_of","term_name":"photosynthesis, light harvesting","termid":"GO:0009765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"photosystem II repair","termid":"GO:0010206"}


id: PBO:0041444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 9 open reading frame 85","termid":"PBO:0041444"}


id: GO:0032836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the glomerular basement membrane over time, from its formation to the mature structure. The glomerular basement membrane is the basal laminal portion of the glomerulus which performs the actual filtration.","definition_xrefs":["GOC:sr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix organization","termid":"GO:0030198"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"glomerulus development","termid":"GO:0032835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerular basement membrane development","termid":"GO:0032836"}


id: PBO:0034787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 adaptor complex beta subunit Apl1 (predicted)","termid":"PBO:0034787"}


id: MONDO:0013098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition in which a person loses the ability to hear due to exposure to high intensity sound.","definition_xrefs":["NCIT:C34664"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"hearing loss disorder","termid":"MONDO:0005365"},{"relation_name":"is_a","term_name":"inherited auditory system disease","termid":"MONDO:0037940"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"noise induced hearing loss","secondary_identifiers":["UMLS:C0018781","MESH:D006317","ICD9:388.12","EFO:1001254","SCTID:73415002","MEDGEN:5455"],"synonyms":[{"name":"NIHL","type":"related"},{"name":"hearing loss, noise-induced, susceptibility to","type":"related"},{"name":"noise-induced hearing loss","type":"exact"}],"termid":"MONDO:0013098","xrefs":{"Monarch":{"xref_id":"0013098"}}}


id: GO:0072150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a juxtaglomerulus cell.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"juxtaglomerulus cell differentiation","termid":"GO:0072052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"juxtaglomerulus cell fate commitment","termid":"GO:0072150"}


id: PBO:0079487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain containing 5","termid":"PBO:0079487"}


id: PBO:0090831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Has1","termid":"PBO:0090831"}


id: PBO:0083573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF SEF1/YBL066C; YBL065W is a non-essential gene","termid":"PBO:0083573"}


id: GO:0033497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sinapate, (2E)-3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid biosynthetic process","termid":"GO:0009699"},{"relation_name":"is_a","term_name":"sinapate metabolic process","termid":"GO:0033496"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"sinapate biosynthetic process","synonyms":[{"name":"sinapate anabolism","type":"exact"},{"name":"sinapate biosynthesis","type":"exact"},{"name":"sinapate formation","type":"exact"},{"name":"sinapate synthesis","type":"exact"}],"termid":"GO:0033497"}


id: GO:0031702
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 angiotensin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiotensin receptor binding","termid":"GO:0031701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type 1 angiotensin receptor binding","synonyms":[{"name":"AT1 receptor binding","type":"exact"},{"name":"type 1 angiotensin receptor ligand","type":"narrow"}],"termid":"GO:0031702"}


id: GO:0070532
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the BRCA1-BARD1 heterodimer, BACH1 and TopBP1, and binds to DNA during S phase at DNA damage sites.","definition_xrefs":["PMID:16391231","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"BRCA1-B complex","termid":"GO:0070532"}


id: GO:1902336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of retinal ganglion cell axon guidance.","definition_xrefs":["GOC:BHF","PMID:21658587","GOC:TermGenie","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of retinal ganglion cell axon guidance","termid":"GO:0090259"},{"relation_name":"is_a","term_name":"positive regulation of axon guidance","termid":"GO:1902669"},{"relation_name":"positively_regulates","term_name":"retinal ganglion cell axon guidance","termid":"GO:0031290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of retinal ganglion cell axon guidance","synonyms":[{"name":"activation of retinal ganglion cell axon guidance","type":"narrow"},{"name":"activation of retinal ganglion cell axon pathfinding","type":"narrow"},{"name":"positive regulation of retinal ganglion cell axon pathfinding","type":"exact"},{"name":"up regulation of retinal ganglion cell axon guidance","type":"exact"},{"name":"up regulation of retinal ganglion cell axon pathfinding","type":"exact"},{"name":"up-regulation of retinal ganglion cell axon guidance","type":"exact"},{"name":"up-regulation of retinal ganglion cell axon pathfinding","type":"exact"},{"name":"upregulation of retinal ganglion cell axon guidance","type":"exact"},{"name":"upregulation of retinal ganglion cell axon pathfinding","type":"exact"}],"termid":"GO:1902336"}


id: MONDO:0006787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign cystic proliferation of the sweat glands with apocrine or eccrine differentiation. It usually presents as a dome-shaped, cystic papular or nodular lesion usually in the face and neck. It is a unilocular or mutlilocular lesion lined by an inner and an outer layer of epithelium. Complete excision is usually curative.","definition_xrefs":["NCIT:C3760"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"apocrine sweat gland neoplasm","termid":"MONDO:0003686"},{"relation_name":"is_a","term_name":"benign neoplasm of sweat gland","termid":"MONDO:0021489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hidrocystoma","secondary_identifiers":["SCTID:254725004","ICDO:8404/0","UMLS:C0206672","MESH:D018251","icd11.foundation:2040265542","ICD9:709.8","MedDRA:10059019","MEDGEN:61656","DOID:3893","EFO:1000967"],"synonyms":[{"name":"Hydrocystoma","type":"exact"},{"name":"apocrine cystadenoma","type":"narrow"},{"name":"apocrine/eccrine hidrocystoma","type":"exact"},{"name":"cystadenoma","type":"related"},{"name":"eccrine cystadenoma","type":"narrow"},{"name":"eccrine hidrocystoma of skin","type":"exact"},{"name":"hidrocystoma","type":"exact"},{"name":"hidrocystoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0006787","xrefs":{"Monarch":{"xref_id":"0006787"}}}


id: MONDO:0010984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of Usher syndrome type I that is caused by homozygous or compound heterozygous mutation in the gene encoding cadherin-23 (CDH23) on chromosome 10q22. It is inherited in an autosomal recessive manner.","definition_xrefs":["OMIM:601067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Usher syndrome type 1","termid":"MONDO:0010168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Usher syndrome type 1D","secondary_identifiers":["ICD10CM:H35.5","MEDGEN:322051","UMLS:C1832845","GARD:5438","DOID:0110831"],"synonyms":[{"name":"USH1D","type":"exact"},{"name":"USHER syndrome, type ID","type":"related"},{"name":"Ush1D/F, Cdh23/Pcdh15, digenic","type":"related"},{"name":"Usher syndrome type 1D","type":"exact"},{"name":"Usher syndrome type ID","type":"exact"},{"name":"Usher syndrome, type 1D","type":"related"},{"name":"Usher syndrome, type 1D/F digenic","type":"exact"},{"name":"Usher syndrome, type Id/F, Cdh23/Pcdh15, digenic","type":"related"}],"termid":"MONDO:0010984","xrefs":{"Monarch":{"xref_id":"0010984"}}}


id: GO:0034740
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains TFIIIC, topoisomerase 1, and Sub1/PC4. Characterized in human, the complex is involved in regulating transcription from RNA polymerase III (Pol III) promoters. Topoisomerase 1 and Sub1 enhance the accuracy of transcription termination, and promote reinitiation by Pol III.","definition_xrefs":["PMID:9660958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase III transcription regulator complex","termid":"GO:0090576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"TFIIIC-TOP1-SUB1 complex","synonyms":[{"name":"TFIIIC-Topoisomerase 1-PC4 complex","type":"exact"}],"termid":"GO:0034740"}


id: GO:0045915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving catecholamine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amine metabolic process","termid":"GO:0033240"},{"relation_name":"is_a","term_name":"regulation of catecholamine metabolic process","termid":"GO:0042069"},{"relation_name":"positively_regulates","term_name":"catecholamine metabolic process","termid":"GO:0006584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of catecholamine metabolic process","synonyms":[{"name":"activation of catecholamine metabolic process","type":"narrow"},{"name":"positive regulation of catecholamine metabolism","type":"exact"},{"name":"stimulation of catecholamine metabolic process","type":"narrow"},{"name":"up regulation of catecholamine metabolic process","type":"exact"},{"name":"up-regulation of catecholamine metabolic process","type":"exact"},{"name":"upregulation of catecholamine metabolic process","type":"exact"}],"termid":"GO:0045915"}


id: PBO:0111905
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr5 N-terminal domain","termid":"PBO:0111905"}


id: PBO:0033832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase Psk1","termid":"PBO:0033832"}


id: PBO:0063968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 2","termid":"PBO:0063968"}


id: SO:0002368
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for plastid SSU rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"plastid_rRNA_gene","termid":"SO:0002366"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plastid_SSU_rRNA_gene","synonyms":[{"name":"plastid small subunit rRNA gene","type":"exact"}],"termid":"SO:0002368"}


id: PBO:0053356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 260","termid":"PBO:0053356"}


id: MONDO:0016258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon malignant neoplasm arising from the uterine corpus. It is characterized by the presence of a malignant epithelial component and a benign mesenchymal (usually fibrous) component.","definition_xrefs":["NCIT:C40182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine body mixed cancer","termid":"MONDO:0002879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine corpus carcinofibroma","secondary_identifiers":["GARD:20474","ICDO:8934/3","Orphanet:213605","MEDGEN:364874","UMLS:C1883485"],"synonyms":[{"name":"Carcinofibroma of the corpus uteri","type":"related"},{"name":"uterine corpus Carcinofibroma","type":"exact"}],"termid":"MONDO:0016258","xrefs":{"Monarch":{"xref_id":"0016258"}}}


id: PBO:0044062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin 8","termid":"PBO:0044062"}


id: MONDO:0030407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare disease with Cushing syndrome as a major feature (obsolete MONDO:0030407)","termid":"MONDO:0030407","xrefs":{"Monarch":{"xref_id":"0030407"}}}


id: PR:O59755
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cut12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body-associated protein cut12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC649.05","synonyms":[{"name":"Spom972h-cut12","type":"exact"},{"name":"cell untimely torn protein 12 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59755"}


id: PBO:0069034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 279, pseudogene","termid":"PBO:0069034"}


id: PBO:0115007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper-binding protein involved in respiratory complex assembly Cmc2","termid":"PBO:0115007"}


id: MONDO:0015920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic neurometabolic disease with X-linked intellectual disability (obsolete MONDO:0015920)","secondary_identifiers":["Orphanet:182076"],"termid":"MONDO:0015920","xrefs":{"Monarch":{"xref_id":"0015920"}}}


id: MOD:00905
data:
  {"annotated_genes":["SJAG_04125","SJAG_04553","SJAG_00784","SJAG_04789","SJAG_00827","SJAG_03290","SJAG_01029","SJAG_00096","SJAG_02694","SJAG_02260","SJAG_00288","SJAG_01626","SJAG_01162","SJAG_02388","SJAG_02504","SJAG_02489","SJAG_04067","SJAG_00109","SJAG_04238","SJAG_03032","SJAG_00254","SJAG_04953","SJAG_01970","SJAG_02435","SJAG_02827"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[80172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00793"},{"annotations":[80228,80233,80134,80234,80184,80200,80154,80242,80020,79981,80031,80021,80196,79983,80013,80039,80143,79969,79984,80156,80157,80235,80240,79941,80065,80006,80041,80236,80137,80040,79982,80197,80241,79930,80155,79931,79940,80136,79948,79932,80000,80009,80185,80186,80198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00689"}]},"cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-cysteine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00096":null,"SJAG_00109":null,"SJAG_00254":null,"SJAG_00288":null,"SJAG_00784":null,"SJAG_00827":null,"SJAG_01029":null,"SJAG_01162":null,"SJAG_01626":null,"SJAG_01970":null,"SJAG_02260":null,"SJAG_02388":null,"SJAG_02435":null,"SJAG_02489":null,"SJAG_02504":null,"SJAG_02694":null,"SJAG_02827":null,"SJAG_03032":null,"SJAG_03290":null,"SJAG_04067":null,"SJAG_04125":null,"SJAG_04238":null,"SJAG_04553":null,"SJAG_04789":null,"SJAG_04953":null},"genotype_count":0,"is_obsolete":false,"name":"modified L-cysteine residue","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"ModCys","type":"exact"}],"termid":"MOD:00905","terms_by_termid":{"MOD:00689":null,"MOD:00793":null}}


id: PBO:0001109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2B beta subunit (predicted)","termid":"PBO:0001109"}


id: GO:1902158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to G2 DNA damage checkpoint signaling.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to DNA damage checkpoint signaling","termid":"GO:1902154"},{"relation_name":"is_a","term_name":"regulation of response to G2 DNA damage checkpoint signaling","termid":"GO:1902157"},{"relation_name":"positively_regulates","term_name":"response to G2 DNA damage checkpoint signaling","termid":"GO:0072426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to G2 DNA damage checkpoint signaling","synonyms":[{"name":"activation of G2/M transition DNA damage checkpoint effector process","type":"exact"},{"name":"activation of response to G2 DNA damage checkpoint signaling","type":"narrow"},{"name":"activation of response to signal involved in G2/M transition DNA damage checkpoint","type":"exact"},{"name":"positive regulation of G2/M transition DNA damage checkpoint effector process","type":"exact"},{"name":"positive regulation of response to signal involved in G2/M transition DNA damage checkpoint","type":"exact"},{"name":"up regulation of G2/M transition DNA damage checkpoint effector process","type":"exact"},{"name":"up regulation of response to G2 DNA damage checkpoint signaling","type":"exact"},{"name":"up regulation of response to signal involved in G2/M transition DNA damage checkpoint","type":"exact"},{"name":"up-regulation of G2/M transition DNA damage checkpoint effector process","type":"exact"},{"name":"up-regulation of response to G2 DNA damage checkpoint signaling","type":"exact"},{"name":"up-regulation of response to signal involved in G2/M transition DNA damage checkpoint","type":"exact"},{"name":"upregulation of G2/M transition DNA damage checkpoint effector process","type":"exact"},{"name":"upregulation of response to G2 DNA damage checkpoint signaling","type":"exact"},{"name":"upregulation of response to signal involved in G2/M transition DNA damage checkpoint","type":"exact"}],"termid":"GO:1902158"}


id: MONDO:0017599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Splenic diffuse red pulp small B-cell lymphoma is a rare, indolent B-cell non-Hodgkin lymphoma characterized by abnormal proliferation of small, monomorphous, basophilic B-lymphocytes, with villous cytoplasm, in the splenic red pulp, bone marrow and peripheral blood. It typically presents in the late clinical stages with splenomegaly and moderate lymphocytosis. Cytopenias are rare and likely associated with hypersplenism.","definition_xrefs":["Orphanet:300869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"marginal zone lymphoma","termid":"MONDO:0017604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"splenic diffuse red pulp small B-cell lymphoma","secondary_identifiers":["NCIT:C80309","SCTID:763884007","ICDO:9591/3","MEDGEN:397437","ONCOTREE:SDRPL","GARD:21248","UMLS:C2699508","icd11.foundation:1970934986"],"synonyms":[{"name":"SDRPL","type":"exact"},{"name":"splenic diffuse red pulp lymphoma","type":"exact"}],"termid":"MONDO:0017599","xrefs":{"Monarch":{"xref_id":"0017599"}}}


id: GO:1901705
data:
  {"annotated_genes":["SJAG_00107","SJAG_00830","SJAG_04149","SJAG_00396","SJAG_04098","SJAG_03985","SJAG_06635"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87093,90166,102795,103279,107802,109926,110585,112747],"is_not":false,"summary":null,"term":"GO:1901705"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-isoleucine.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate family amino acid biosynthetic process","termid":"GO:0009067"},{"relation_name":"is_a","term_name":"isoleucine biosynthetic process","termid":"GO:0009097"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00107":null,"SJAG_00396":null,"SJAG_00830":null,"SJAG_03985":null,"SJAG_04098":null,"SJAG_04149":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"L-isoleucine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-isoleucine anabolism","type":"exact"},{"name":"L-isoleucine biosynthesis","type":"exact"},{"name":"L-isoleucine formation","type":"exact"},{"name":"L-isoleucine synthesis","type":"exact"}],"termid":"GO:1901705","terms_by_termid":{"GO:1901705":null}}


id: PBO:0085346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipase B (lysophospholipase) involved in lipid metabolism; hydrolyzes phosphatidylinositol and phosphatidylserine and displays transacylase activity in vitro; PLB3 has a paralog, PLB1, that arose from the whole genome duplication","termid":"PBO:0085346"}


id: PBO:0090564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface protein, serine/threonine repeat","termid":"PBO:0090564"}


id: GO:0039652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a virus initiates, promotes, or enhances an NF-kappaB signaling cascade in its host organism.","definition_xrefs":["PMID:11907233","PMID:7845680"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by virus of host NF-kappaB cascade (obsolete GO:0039652)","synonyms":[{"name":"activation by virus of host NF-kappaB transcription factor activity","type":"related"}],"termid":"GO:0039652"}


id: PBO:0031187
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_thiamine_diphosphokinase_activity","termid":"PBO:0031187"}


id: PBO:0069639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 916, pseudogene","termid":"PBO:0069639"}


id: PBO:0017721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heavy metal ion homeostasis protein Bsd2 (predicted)","termid":"PBO:0017721"}


id: GO:0050488
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + ecdysteroid = UDP + glucosyl-ecdysteroid.","definition_xrefs":["GOC:ai","PMID:10073711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"ecdysteroid UDP-glucosyltransferase activity","secondary_identifiers":["GO:0050489"],"synonyms":[{"name":"ecdysteroid UDP-glucosyl/UDP-glucuronosyl transferase activity","type":"related"}],"termid":"GO:0050488"}


id: PBO:0034424
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protease_activator_(obsolete_protease_activator)","termid":"PBO:0034424"}


id: PBO:0090855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil phosphoribosyltransferase Uck2","termid":"PBO:0090855"}


id: PBO:0005498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siderophore-iron transporter Str2","termid":"PBO:0005498"}


id: GO:0097348
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a host cell endocytic vesicle.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasmic vesicle membrane","termid":"GO:0044162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell endocytic vesicle membrane","termid":"GO:0097348"}


id: GO:0017106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Acts to negatively regulate the activity of activin, a nonsteroidal regulator synthesized in the pituitary gland and gonads that stimulates the secretion of follicle-stimulating hormone.","definition_xrefs":["ISBN:0198506732","ISBN:0721662544"],"gene_count":0,"genotype_count":0,"name":"obsolete activin inhibitor activity (obsolete GO:0017106)","synonyms":[{"name":"activin inhibitor activity","type":"exact"}],"termid":"GO:0017106"}


id: GO:1905562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vascular endothelial cell proliferation.","definition_xrefs":["GOC:BHF_telomere","GOC:nc","PMID:23201774","GOC:BHF","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endothelial cell proliferation","termid":"GO:0001936"},{"relation_name":"regulates","term_name":"vascular endothelial cell proliferation","termid":"GO:0101023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular endothelial cell proliferation","termid":"GO:1905562"}


id: FYPO:0003213
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell separation is instantaneous and asymmetrical, with a ripped primary septum. Explosive cell separation takes a few seconds (rather than 5-6 minutes as in wild type) and involves asymmetrical degradation and/or breakage of the septum edging followed by an abrupt tear of a weak primary septum and an instantaneous curvature of the secondary septum.","definition_xrefs":["PomBase:mah","PMID:22891259"],"direct_ancestors":[{"relation_name":"has_output","term_name":"cell lysis during cytokinesis","termid":"FYPO:0003440"},{"relation_name":"is_a","term_name":"abnormal cell separation after cytokinesis","termid":"FYPO:0000164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"explosive cytokinetic cell separation resulting in vegetative cell lysis","synonyms":[{"name":"side-by-side cells","type":"related"},{"name":"side-explosive cell separation","type":"exact"}],"termid":"FYPO:0003213"}


id: GO:1903048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of acetylcholine-gated cation channel activity.","definition_xrefs":["GOC:TermGenie","GOC:PARL","PMID:21718690","GO_REF:0000059","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of excitatory postsynaptic potential","termid":"GO:0098815"},{"relation_name":"is_a","term_name":"regulation of postsynaptic neurotransmitter receptor activity","termid":"GO:0098962"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of acetylcholine-gated cation channel activity","termid":"GO:1903048"}


id: MONDO:1012417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"persistent right aortic arch with subclavian artery and ligamentum arteriosum, non-human animal","termid":"MONDO:1011649"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent right aortic arch with subclavian artery and ligamentum arteriosum, dog","secondary_identifiers":["OMIA:001570-9615"],"termid":"MONDO:1012417","xrefs":{"Monarch":{"xref_id":"1012417"}}}


id: MONDO:1011653
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniomandibular osteopathy, non-human animal","secondary_identifiers":["OMIA:000236"],"termid":"MONDO:1011653","xrefs":{"Monarch":{"xref_id":"1011653"}}}


id: GO:0010030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increase the rate of seed germination.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of seed germination","termid":"GO:0010029"},{"relation_name":"is_a","term_name":"positive regulation of post-embryonic development","termid":"GO:0048582"},{"relation_name":"positively_regulates","term_name":"seed germination","termid":"GO:0009845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of seed germination","synonyms":[{"name":"activation of seed germination","type":"narrow"},{"name":"stimulation of seed germination","type":"narrow"},{"name":"up regulation of seed germination","type":"exact"},{"name":"up-regulation of seed germination","type":"exact"},{"name":"upregulation of seed germination","type":"exact"}],"termid":"GO:0010030"}


id: PBO:0003917
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corresponds to duplicated region flanking mating-type region","termid":"PBO:0003917"}


id: PBO:0068162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 469","termid":"PBO:0068162"}


id: PBO:0058295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4669","termid":"PBO:0058295"}


id: RO:0002635
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"parasitized_by","termid":"RO:0002445"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_endoparasite","termid":"RO:0002635"}


id: PBO:0055521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2955","termid":"PBO:0055521"}


id: PBO:0058435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4999","termid":"PBO:0058435"}


id: PBO:0089023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, G-patch type, human GPATCH11 ortholog","termid":"PBO:0089023"}


id: GO:0060822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands and ultimately resulting in the specification of an axial mesodermal fate.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor signaling pathway involved in axial mesodermal cell fate specification (obsolete GO:0060822)","synonyms":[{"name":"transforming growth factor beta receptor signalling pathway involved in axial mesodermal cell fate specification","type":"exact"}],"termid":"GO:0060822"}


id: PBO:0046059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit I pseudogene 1","termid":"PBO:0046059"}


id: PBO:0073882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 11 member 2","termid":"PBO:0073882"}


id: PBO:0058407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4776-2","termid":"PBO:0058407"}


id: PBO:0083561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene SLM3/YDL033C; YDL032W is not an essential gene","termid":"PBO:0083561"}


id: PBO:0001573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain protein","termid":"PBO:0001573"}


id: GO:0014900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A muscle system process that results in an increase in cell number by cell division, often leading to an increase in the size of an organ.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle adaptation","termid":"GO:0043500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle hyperplasia","termid":"GO:0014900"}


id: PBO:0085064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential subunit of Sec63 complex; with Sec61 complex, Kar2p/BiP and Lhs1p forms a channel competent for SRP-dependent and post-translational SRP-independent protein targeting and translocation into the ER; other members are Sec63p, Sec62p, and Sec72p","termid":"PBO:0085064"}


id: MONDO:0018837
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vasculitis, characterized by inflammatory lesions in the wall of vessels, may be due to different viruses.","definition_xrefs":["Orphanet:48435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary vasculitis","termid":"MONDO:0018640"},{"relation_name":"is_a","term_name":"post-infectious disorder","termid":"MONDO:0021669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postinfectious vasculitis","secondary_identifiers":["UMLS:C4510302","GARD:18835","SCTID:724063005","MEDGEN:1376009"],"termid":"MONDO:0018837","xrefs":{"Monarch":{"xref_id":"0018837"}}}


id: GO:0006164
data:
  {"annotated_genes":["SJAG_04882","SJAG_00542","SJAG_00915","SJAG_MIT09","SJAG_00044","SJAG_01582","SJAG_00985","SJAG_01081","SJAG_02618","SJAG_04693","SJAG_00957","SJAG_04123","SJAG_03946","SJAG_MIT15","SJAG_00133","SJAG_04681","SJAG_03355","SJAG_01859","SJAG_02850","SJAG_00836","SJAG_02564","SJAG_07003","SJAG_06634","SJAG_01566","SJAG_04122","SJAG_04422","SJAG_01471","SJAG_03114","SJAG_04970","SJAG_01500","SJAG_02105","SJAG_MIT37","SJAG_02364","SJAG_02887","SJAG_01814","SJAG_01298","SJAG_04634","SJAG_00438","SJAG_02889","SJAG_01070","SJAG_05204","SJAG_03925","SJAG_03298","SJAG_02598","SJAG_00964","SJAG_01359","SJAG_03140","SJAG_04849","SJAG_03811","SJAG_01661","SJAG_02038"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88359,97203,109415,114453],"is_not":false,"summary":null,"term":"GO:0006164"},{"annotations":[102920,88355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[118479,109741,114001,102921,99072,116852,97296,109855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[97621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[116335,93018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[59209,107757,100691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[93236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[99569,101740,107758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[118480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006188"},{"annotations":[93238,101312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[112583,90132,90555,98843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034356"},{"annotations":[116797,99561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[88495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[91404,95943,96966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006741"},{"annotations":[66905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015986"},{"annotations":[118557,118563,104499,118568,94328,103153,92763,108276,107391,102535,92333,115342,103182,107298,93351,88606,101316],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[109857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009152"},{"annotations":[117502],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905706"},{"annotations":[93240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide metabolic process","termid":"GO:0006163"},{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"purine-containing compound biosynthetic 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id: MONDO:0002593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thymic carcinoma (obsolete MONDO:0002593)","termid":"MONDO:0002593","xrefs":{"Monarch":{"xref_id":"0002593"}}}


id: PBO:0072675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTRAF pseudogene 2","termid":"PBO:0072675"}


id: GO:0002888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of myeloid leukocyte mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte mediated immunity","termid":"GO:0002705"},{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte mediated immunity","termid":"GO:0002886"},{"relation_name":"positively_regulates","term_name":"myeloid leukocyte mediated immunity","termid":"GO:0002444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myeloid leukocyte mediated immunity","synonyms":[{"name":"activation of myeloid leukocyte mediated immunity","type":"narrow"},{"name":"stimulation of myeloid leukocyte mediated immunity","type":"narrow"},{"name":"up regulation of myeloid leukocyte mediated immunity","type":"exact"},{"name":"up-regulation of myeloid leukocyte mediated immunity","type":"exact"},{"name":"upregulation of myeloid leukocyte mediated immunity","type":"exact"}],"termid":"GO:0002888"}


id: PBO:0057412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548n","termid":"PBO:0057412"}


id: PBO:0065035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 1","termid":"PBO:0065035"}


id: PBO:0038400
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-relation_between_physical_entity_and_a_process_or_stage","termid":"PBO:0038400"}


id: PBO:0028857
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_splicing_of_mRNA_introns_with_low_A/U_content_and_polypyrimidine_tracts_distal_to_branch_site","termid":"PBO:0028857"}


id: PBO:0078698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAA) 1-1","termid":"PBO:0078698"}


id: GO:0035596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the addition of a methylthioether group (-SCH3) to a nucleic acid or protein acceptor.","definition_xrefs":["GOC:jh2","PMID:20472640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkylthioltransferase activity","termid":"GO:0050497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016782","GO:0003674"],"is_obsolete":false,"name":"methylthiotransferase activity","synonyms":[{"name":"MTTase","type":"exact"}],"termid":"GO:0035596"}


id: MONDO:0022725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chondrodysplasia lethal recessive (obsolete MONDO:0022725)","termid":"MONDO:0022725","xrefs":{"Monarch":{"xref_id":"0022725"}}}


id: MONDO:0007686
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gray platelet syndrome (GPS) is a rare inherited bleeding disorder characterized by macrothrombocytopenia, myelofibrosis, splenomegaly and typical gray appearance of platelets on Wright stained peripheral blood smear.","definition_xrefs":["Orphanet:721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"alpha granule disease","termid":"MONDO:0020117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"gray platelet syndrome","secondary_identifiers":["GARD:2562","icd11.foundation:1818085572","MEDGEN:82900","MESH:D055652","OMIM:139090","NCIT:C84741","DOID:0111044","UMLS:C0272302","SCTID:51720005"],"synonyms":[{"name":"Alpha storage pool deficiency","type":"exact"},{"name":"BDPLT4","type":"exact"},{"name":"GPS","type":"exact"},{"name":"bleeding disorder, Platelet-type, 4","type":"related"},{"name":"gray platelet syndrome","type":"exact"},{"name":"marked decrease or absence of alpha-granules and of platelet-specific alpha-granule proteins","type":"related"},{"name":"platelet alpha-granule deficiency","type":"exact"},{"name":"platelet-type bleeding disorder 4","type":"exact"}],"termid":"MONDO:0007686","xrefs":{"Monarch":{"xref_id":"0007686"}}}


id: PBO:0071030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 32","termid":"PBO:0071030"}


id: PBO:0000567
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.5.5","termid":"PBO:0000567"}


id: GO:1901624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lymphocyte chemotaxis.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte chemotaxis","termid":"GO:0002689"},{"relation_name":"is_a","term_name":"regulation of lymphocyte chemotaxis","termid":"GO:1901623"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte migration","termid":"GO:2000402"},{"relation_name":"negatively_regulates","term_name":"lymphocyte chemotaxis","termid":"GO:0048247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lymphocyte chemotaxis","synonyms":[{"name":"down regulation of lymphocyte chemotaxis","type":"exact"},{"name":"down-regulation of lymphocyte chemotaxis","type":"exact"},{"name":"downregulation of lymphocyte chemotaxis","type":"exact"},{"name":"inhibition of lymphocyte chemotaxis","type":"narrow"}],"termid":"GO:1901624"}


id: PBO:0055617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3056","termid":"PBO:0055617"}


id: MONDO:0015924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pulmonary arterial hypertension (PAH) is a group of diseases characterized by mean pulmonary artery pressure >20 mmHg and elevated pulmonary arterial resistance leading to right heart failure. PAH is progressive and potentially fatal. PAH may be idiopathic and/ or familial, have overt features of venous/capillary involvement (pulmonary veno-occlusive disease, PVOD/pulmonary capillary hemangiomatosis, PCH), induced by drug or toxin (drug-or toxin-induced PAH), or associated with other diseases like congenital heart disease, connective tissue disease, HIV, schistosomiasis, portal hypertension (PAH associated with other disease).","definition_xrefs":["Orphanet:182090","PMID:30545973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary hypertension","termid":"MONDO:0005149"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary arterial hypertension","secondary_identifiers":["EFO:0001361","icd11.foundation:1931148955","MESH:D000081029","NANDO:1200425","GARD:7501","SCTID:11399002","NORD:1634","UMLS:C2973725","MEDGEN:425404","MedDRA:10064911","NANDO:2100103","NANDO:2200298"],"synonyms":[{"name":"PAH","type":"exact"},{"name":"PAH with overt features of venous/capillaries involvement","type":"narrow"},{"name":"PPH","type":"related"},{"name":"PVOD/PCH","type":"narrow"},{"name":"idiopathic pulmonary hypertension","type":"related"},{"name":"pulmonary arterial hypertension","type":"exact"}],"termid":"MONDO:0015924","xrefs":{"Monarch":{"xref_id":"0015924"}}}


id: MONDO:1011570
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuronal ceroid lipofuscinosis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, dog","termid":"MONDO:1010860"},{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, non-human animal","termid":"MONDO:1011430"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, dog","secondary_identifiers":["OMIA:000181-9615"],"termid":"MONDO:1011570","xrefs":{"Monarch":{"xref_id":"1011570"}}}


id: PBO:0083161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps the verified gene POL30","termid":"PBO:0083161"}


id: PBO:0039448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and LEM domain containing 1","termid":"PBO:0039448"}


id: PBO:0070820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 50","termid":"PBO:0070820"}


id: MONDO:0002186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of maxillary sinusitis.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maxillary sinusitis","termid":"MONDO:0005842"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute maxillary sinusitis","secondary_identifiers":["DOID:2050","ICD10CM:J01.0","icd11.foundation:1617309258","ICD9:461.0","SCTID:68272006","MEDGEN:510086","UMLS:C0155804"],"synonyms":[{"name":"acute antritis","type":"exact"},{"name":"maxillary sinusitis, acute","type":"exact"}],"termid":"MONDO:0002186","xrefs":{"Monarch":{"xref_id":"0002186"}}}


id: PBO:0056441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 14","termid":"PBO:0056441"}


id: PR:O14002
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mak2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxide stress-activated histidine kinase mak2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.09","synonyms":[{"name":"Spom972h-mak2","type":"exact"},{"name":"his-Asp phosphorelay kinase phk1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mcs4-associated kinase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14002"}


id: PBO:0002114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V0 subunit d (predicted)","termid":"PBO:0002114"}


id: PBO:0112694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decaprenyldihydroxybenzoate methyltransferase Coq3","termid":"PBO:0112694"}


id: PBO:0066540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RGS5 antisense RNA 1","termid":"PBO:0066540"}


id: GO:0160036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of postsynaptic density assembly.","definition_xrefs":["PMID:17626212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of postsynaptic density assembly","termid":"GO:0099151"},{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"is_a","term_name":"positive regulation of postsynaptic density organization","termid":"GO:1905876"},{"relation_name":"positively_regulates","term_name":"postsynaptic density assembly","termid":"GO:0097107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of postsynaptic density assembly","termid":"GO:0160036"}


id: PBO:0073874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 10 member 2","termid":"PBO:0073874"}


id: PBO:0083741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the MIND kinetochore complex; joins kinetochore subunits contacting DNA to those contacting microtubules; critical to kinetochore assembly; complex consists of Mtw1p Including Nnf1p-Nsl1p-Dsn1p (MIND)","termid":"PBO:0083741"}


id: GO:0008118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a beta-D-galactosyl-(1->4)-N-acetyl-beta-D-glucosaminyl derivative + CMP-N-acetyl-beta-neuraminate = an N-acetyl-alpha-neuraminyl-(2->3)-beta-D-galactosyl-(1->4)-N-acetyl-beta-D-glucosaminyl derivative + CMP + H+.","definition_xrefs":["RHEA:52316","PMID:10206952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialyltransferase activity","termid":"GO:0008373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"N-acetyllactosaminide alpha-2,3-sialyltransferase activity","secondary_identifiers":["MetaCyc:2.4.99.6-RXN","EC:2.4.3.6"],"synonyms":[{"name":"N-acetyllactosaminide alpha-2,3-sialyltransferase","type":"exact"},{"name":"alpha2->3 sialyltransferase activity","type":"related"},{"name":"cytidine monophosphoacetylneuraminate-beta-galactosyl(1->4)acetylglucosaminide alpha2->3-sialyltransferase activity","type":"related"},{"name":"neolactotetraosylceramide alpha-2,3-sialyltransferase activity","type":"narrow"}],"termid":"GO:0008118"}


id: FYPO:0003356
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cells show increased sensitivity to papuamide B during mating. Cells stop growing (and may die) at a concentration of papuamide B that allows wild type cells to grow.","definition_xrefs":["PomBase:mah","PMID:24514900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical","termid":"FYPO:0002683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to papuamide B during mating","synonyms":[{"name":"sensitive to papuamide B during conjugation with cellular fusion","type":"exact"},{"name":"sensitivity to chemicals interfering with lipids during mating","type":"broad"}],"termid":"FYPO:0003356"}


id: PBO:0017757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WIP family cytoskeletal protein Bbc1 (predicted)","termid":"PBO:0017757"}


id: GO:0031440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mRNA 3'-end processing, any process involved in forming the mature 3' end of an mRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA processing","termid":"GO:0050684"},{"relation_name":"regulates","term_name":"mRNA 3'-end processing","termid":"GO:0031124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"regulation of mRNA 3'-end processing","termid":"GO:0031440"}


id: CHEBI:18019
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"An L-alpha-amino acid; the L-isomer of lysine.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysine","termid":"CHEBI:18019"}


id: MONDO:0700266
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paraneoplastic syndrome that involves the integumental system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"paraneoplastic syndrome","termid":"MONDO:0021073"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraneoplastic cutaneous syndrome","termid":"MONDO:0700266","xrefs":{"Monarch":{"xref_id":"0700266"}}}


id: PATO:0001648
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An 1-D extent quality which is equal to the length of the closed curve of a circle.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"perimeter","termid":"PATO:0001711"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circumference","termid":"PATO:0001648"}


id: MOD:00213
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-serine residue to the polymer chondroitin sulfate by a D-glucuronosyl-D-galactosyl-D-galactosyl-D-xylosyl tetrasaccharide.","definition_xrefs":["RESID:AA0208","PubMed:1794445","PubMed:1898736","PubMed:3472204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-serine","termid":"MOD:00002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"chondroitin sulfate D-glucuronosyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine","synonyms":[{"name":"chondroitin 4-sulfate (chondroitin sulfate A)","type":"exact"},{"name":"chondroitin 6-sulfate (chondroitin sulfate C)","type":"exact"},{"name":"chondroitin sulfate D-glucuronosyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine","type":"exact"},{"name":"poly[beta-1,4-D-glucopyranuronosyl-beta-1,3-(2-acetamido-2-deoxy-4-sulfate-D-galactosyl)]-beta-1,4-D-glucopyranuronosyl-beta-1,3-D-galactosyl-beta-1,3-D-galactosyl-beta-1,4-D-xylosyl-beta-1,3-L-serine; poly[beta-1,4-D-glucopyranuronosyl-beta-1,3-(2-acetamido-2-deoxy-6-sulfate D-galactosyl)]-beta-1,4-D-glucopyranuronosyl-beta-1,3-D-galactosyl-beta-1,3-D-galactosyl-beta-1,4-D-xylosyl-beta-1,3-L-serine","type":"exact"}],"termid":"MOD:00213"}


id: MONDO:0018735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Human MALT1 wild-type allele is located in the vicinity of 18q21 and is approximately 79 kb in length. This allele, which encodes mucosa associated lymphoid tissue lymphoma translocation gene 1 protein, plays a role in the modulation of the nuclear factor kappa B complex signaling cascade. The gene is involved in a chromosomal translocation t(11;18)(q21;q21) with the BIRC2 gene in mucosa-associated lymphoid tissue lymphomas.","definition_xrefs":["NCIT:C60672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphangioma","termid":"MONDO:0002013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"multifocal lymphangioendotheliomatosis-thrombocytopenia syndrome","secondary_identifiers":["GARD:10467","Orphanet:464321","UMLS:C5575322","MEDGEN:1804470"],"synonyms":[{"name":"DKFZp434L132","type":"exact"},{"name":"MALT1 wt allele","type":"exact"},{"name":"MLT","type":"exact"},{"name":"MLT1","type":"exact"},{"name":"cutaneovisceral angiomatosis-thrombocytopenia syndrome","type":"exact"},{"name":"mucosa associated lymphoid tissue lymphoma translocation Gene 1 wt allele","type":"exact"},{"name":"multifocal lymphangioendotheliomatosis with thrombocytopenia","type":"exact"}],"termid":"MONDO:0018735","xrefs":{"Monarch":{"xref_id":"0018735"}}}


id: GO:0019726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-mevalonate + NADP+ = H+ + mevaldate + NADPH.","definition_xrefs":["EC:1.1.1.33","RHEA:20193"],"gene_count":0,"genotype_count":0,"name":"obsolete mevaldate reductase (NADPH) activity (obsolete GO:0019726)","synonyms":[{"name":"(R)-mevalonate:NADP+ oxidoreductase","type":"related"},{"name":"mevaldate (reduced nicotinamide adenine dinucleotide phosphate) reductase","type":"related"}],"termid":"GO:0019726"}


id: GO:0016682
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a diphenol, or related compound, acts as a hydrogen or electron donor and reduces oxygen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors","termid":"GO:0016679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","secondary_identifiers":["EC:1.10.3.-"],"synonyms":[{"name":"laccase activity","type":"related"}],"termid":"GO:0016682"}


id: FYPO:0002374
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of actin cortical patches is abnormal during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cortical patch morphology","termid":"FYPO:0000791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal actin cortical patch morphology during mitosis","synonyms":[{"name":"abnormal F-actin patch morphology during mitosis","type":"exact"},{"name":"abnormal actin cortical patch morphology during mitosis during mitotic cell cycle","type":"related"},{"name":"abnormal actin cortical patch morphology during mitosis during vegetative growth","type":"exact"},{"name":"abnormal actin cortical patch morphology during mitotic M phase","type":"related"},{"name":"abnormal actin cortical patch morphology during mitotic nuclear division","type":"exact"},{"name":"abnormal actin patch morphology during mitosis","type":"exact"}],"termid":"FYPO:0002374"}


id: PBO:0078729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met (anticodon CAT) 4-1","termid":"PBO:0078729"}


id: PBO:0091267
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc25 can modulate the probability of entering mitosis at a given cell size","termid":"PBO:0091267"}


id: PBO:0058900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12118","termid":"PBO:0058900"}


id: PBO:0063372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prenylcysteine oxidase 1 like","termid":"PBO:0063372"}


id: MONDO:0002069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the UBERON:0035289.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female breast carcinoma","termid":"MONDO:0004379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"female breast axillary tail cancer","secondary_identifiers":["DOID:1650","ICD10CM:C50.6","ICD9:174.6","UMLS:C0153554","MEDGEN:509328","SCTID:188156001"],"synonyms":[{"name":"axillary tail of breast cancer","type":"exact"},{"name":"cancer of axillary tail of breast","type":"exact"},{"name":"malignant axillary tail of breast neoplasm","type":"exact"},{"name":"malignant neoplasm of axillary tail of breast","type":"exact"},{"name":"malignant neoplasm of axillary tail of female breast","type":"exact"}],"termid":"MONDO:0002069","xrefs":{"Monarch":{"xref_id":"0002069"}}}


id: GO:0080034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in the state or activity of a host cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the formation of an abnormal mass of cells in the host organism, induced by a symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:18836040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to symbiont","termid":"GO:0009608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"host response to induction by symbiont of tumor, nodule or growth in host","termid":"GO:0080034"}


id: FYPO:0001422
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular metabolism phenotype observed in the vegetative growth phase of the life cycle in which the observed occurrence of protein processing is decreased.","definition_xrefs":["PMID:19520858","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein processing during vegetative growth","termid":"FYPO:0001421"},{"relation_name":"is_a","term_name":"decreased proteolysis during vegetative growth","termid":"FYPO:0005443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein processing during vegetative growth","synonyms":[{"name":"decreased Sre1 cleavage","type":"narrow"},{"name":"decreased protein cleavage during vegetative growth","type":"related"},{"name":"decreased protein maturation by peptide bond cleavage during vegetative growth","type":"exact"},{"name":"decreased protein maturation by peptide bond hydrolysis during vegetative growth","type":"exact"},{"name":"decreased protein processing during mitotic cell cycle","type":"related"},{"name":"reduced protein processing during vegetative growth","type":"exact"}],"termid":"FYPO:0001422"}


id: PBO:0072871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SATB1 antisense RNA 1","termid":"PBO:0072871"}


id: GO:0009635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a herbicide stimulus. Herbicides are chemicals used to kill or control the growth of plants.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to toxic substance","termid":"GO:0009636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to herbicide","synonyms":[{"name":"herbicide susceptibility/resistance","type":"related"}],"termid":"GO:0009635"}


id: GO:0045433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process during wing vibration where the male insect produces a species-specific acoustic signal called a love song.","definition_xrefs":["GOC:mtg_sensu","PMID:11092827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male courtship behavior","termid":"GO:0008049"},{"relation_name":"part_of","term_name":"male courtship behavior, veined wing vibration","termid":"GO:0016545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male courtship behavior, veined wing generated song production","synonyms":[{"name":"male courtship behavior, song production","type":"broad"},{"name":"male courtship behaviour, song production","type":"broad"},{"name":"male courtship behaviour, veined wing generated song production","type":"exact"}],"termid":"GO:0045433"}


id: MONDO:0020083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoid hemopathy","termid":"MONDO:0015757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"immunodeficiency-associated lymphoproliferative disease","secondary_identifiers":["MEDGEN:1843142","UMLS:C5681530","GARD:19443","Orphanet:98290","icd11.foundation:1678636940"],"termid":"MONDO:0020083","xrefs":{"Monarch":{"xref_id":"0020083"}}}


id: MONDO:0000249
data:
  {"annotated_genes":["SJAG_02463","SJAG_00938","SJAG_03011","SJAG_01941"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84974,84973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008964"},{"annotations":[84805,84804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009635"}]},"cv_name":"mondo","definition":"Watery voluminous diarrhea resulting from an imbalance between ion and water secretion and absorption.","definition_xrefs":["HP:0005208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diarrheal disease","termid":"MONDO:0001673"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_01941":null,"SJAG_02463":null,"SJAG_03011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"secretory diarrhea","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0267557","MEDGEN:75635","DOID:0050129","SCTID:15699003"],"termid":"MONDO:0000249","terms_by_termid":{"MONDO:0008964":null,"MONDO:0009635":null},"xrefs":{"Monarch":{"xref_id":"0000249"}}}


id: PR:Q09829
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- puf5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio domain-containing protein C4G8.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.03c","synonyms":[{"name":"Spom972h-puf5","type":"exact"}],"termid":"PR:Q09829"}


id: GO:0098616
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2SeO4 => diphosphate + adenylylselenate.","definition_xrefs":["PMID:2537056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016779","GO:0016740"],"is_obsolete":false,"name":"selenate adenylyltransferase (ATP) activity","secondary_identifiers":["Reactome:R-HSA-2408525"],"termid":"GO:0098616"}


id: _global:regulates_level_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"p regulates levels of c if p regulates some amount (PATO:0000070) of c","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"_global:functionally_related_to"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_levels_of","secondary_identifiers":["RO:0002332","GOREL:0000036"],"termid":"_global:regulates_level_of"}


id: PBO:0087001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho-family GTPase interacting protein and Cdc42p effector; required with Gic2p for polarity establishment and initiation of budding; involved in recruitment of septins to the presumptive bud site; interacts with Cdc42p via the Cdc42/Rac-interactive binding (CRIB) domain; gic1 gic2 double mutants are defective for polarizing Cdc42p at elevated temperature, so may function both up- and downstream of Cdc42p; regulates mitotic exit; relocalizes from bud neck to nucleus upon DNA replication stress","termid":"PBO:0087001"}


id: FYPO:0003075
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000257"],"is_obsolete":false,"name":"normal protein kinase activity","termid":"FYPO:0003075"}


id: GO:0046815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the viral genome is retained within the capsid during genome cleavage and packaging.","definition_xrefs":["PMID:9696839"],"gene_count":0,"genotype_count":0,"name":"obsolete genome retention in viral capsid (obsolete GO:0046815)","termid":"GO:0046815"}


id: PBO:0003850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Pmc1","termid":"PBO:0003850"}


id: MONDO:0008824
data:
  {"annotated_genes":["SJAG_01065"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100104"}]},"cv_name":"mondo","definition":"Fetal akinesia deformation sequence (FADS) is a condition characterized by decreased fetal movement (fetal akinesia) as well as intra-uterine growth restriction (IUGR), multiple joint contractures (arthrogryposis), facial anomalies, underdevelopment of the lungs (pulmonary hypoplasia) and other developmental abnormalities. It is generally accepted that this condition is not a true diagnosis or a specific syndrome, but rather a description of a group of abnormalities resulting from fetal akinesia. About 30% of affected individuals are stillborn; many liveborn infants survive only a short time due to complications of pulmonary hypoplasia. FADS may be inherited in an autosomal recessive manner in some cases and may sometimes be caused by mutations in the RAPSN or DOK7 genes.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic respiratory or mediastinal malformation (obsolete MONDO:0015221)","termid":"MONDO:0015221"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita","termid":"MONDO:0015168"},{"relation_name":"is_a","term_name":"thoracic malformation","termid":"MONDO:0015929"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01065":null},"genotype_count":0,"is_obsolete":false,"name":"fetal akinesia deformation sequence","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:9634","ICD9:754.89","NCIT:C129071","OMIMPS:208150","DOID:0111375","SCTID:401138005","MESH:C536647"],"synonyms":[{"name":"FADS","type":"exact"},{"name":"arthrogryposis multiplex congenita with pulmonary hypoplasia","type":"related"},{"name":"arthrogryposis multiplex congenita-pulmonary hypoplasia syndrome","type":"exact"},{"name":"fetal akinesia deformation sequence","type":"exact"},{"name":"fetal akinesia sequence","type":"related"},{"name":"foetal akinesia sequence","type":"related"}],"termid":"MONDO:0008824","terms_by_termid":{"MONDO:0100104":null},"xrefs":{"Monarch":{"xref_id":"0008824"}}}


id: PBO:0112976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"14-3-3 protein, major isoform; involved in post-transcriptional control of the proteome; binds to both proteins and to DNA, including replication origins; regulates exocytosis, vesicle transport, Ras/MAPK and rapamycin-sensitive signaling, aggresome formation, the spindle position checkpoint and meiotic commitment; protein abundance and relative distribution to the nucleus increase upon DNA replication stress; antiapoptotic gene; similar to several human 14-3-3 proteins","termid":"PBO:0112976"}


id: PBO:0002576
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human moe1","termid":"PBO:0002576"}


id: PBO:0005249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xylulose kinase (predicted)","termid":"PBO:0005249"}


id: GO:1903156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any guanine transmembrane transporter activity that is involved in guanine import into cell.","definition_xrefs":["GOC:dos","GOC:TermGenie","GO_REF:0000061","ISBN:0-8249-3695-6"],"gene_count":0,"genotype_count":0,"name":"obsolete guanine transmembrane transporter activity involved in guanine import into cell (obsolete GO:1903156)","synonyms":[{"name":"guanine transmembrane transporter activity involved in guanine import into cell","type":"exact"}],"termid":"GO:1903156"}


id: PBO:0112996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor; GTPase of the Ras superfamily that regulates coated vesicle formation during intracellular trafficking within the Golgi; regulates mitochondrial fission, fusion and function, controlling the flow of fatty acids and metabolites from lipid droplets to peroxisomes and mitochondria; localizes to the Golgi apparatus and the active form to ER and lipid droplets; arf1 arf2 double null mutation is complemented by human ARF1, ARF4, ARF5, or ARF6","termid":"PBO:0112996"}


id: FYPO:0006744
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased during a cellular response to tschimganine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to nucleus during cellular response to tschimganine","synonyms":[{"name":"decreased protein localisation to nucleus during cellular response to tschimganine","type":"exact"},{"name":"decreased protein localization to nucleus during cellular response to TMN","type":"exact"},{"name":"decreased protein localization to nucleus during cellular response to tschimganine during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to nucleus during cellular response to tschimganine during vegetative growth","type":"exact"},{"name":"reduced protein localization to nucleus during cellular response to tschimganine","type":"exact"}],"termid":"FYPO:0006744"}


id: PR:Q9P3W2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg1803 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3W2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SVP1-like protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC458.06","synonyms":[{"name":"Spom972h-atg1803","type":"exact"}],"termid":"PR:Q9P3W2"}


id: PBO:0045836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 26","termid":"PBO:0045836"}


id: PBO:0109952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 51 member A","termid":"PBO:0109952"}


id: PBO:0057606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 941-3","termid":"PBO:0057606"}


id: PBO:0035922
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K4_acetylation_during_vegetative_growth","termid":"PBO:0035922"}


id: PR:Q9URV3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URV3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 2 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.08c","synonyms":[{"name":"Spom972h-mug2","type":"exact"}],"termid":"PR:Q9URV3"}


id: GO:1904153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of retrograde protein transport, ER to cytosol.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:PARL","PMID:18555783","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein exit from endoplasmic reticulum","termid":"GO:0070862"},{"relation_name":"is_a","term_name":"regulation of retrograde protein transport, ER to cytosol","termid":"GO:1904152"},{"relation_name":"negatively_regulates","term_name":"retrograde protein transport, ER to cytosol","termid":"GO:0030970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of retrograde protein transport, ER to cytosol","synonyms":[{"name":"down regulation of protein dislocation from ER","type":"exact"},{"name":"down regulation of retrograde protein transport, ER to cytosol","type":"exact"},{"name":"down regulation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"},{"name":"down-regulation of protein dislocation from ER","type":"exact"},{"name":"down-regulation of retrograde protein transport, ER to cytosol","type":"exact"},{"name":"down-regulation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"},{"name":"downregulation of protein dislocation from ER","type":"exact"},{"name":"downregulation of retrograde protein transport, ER to cytosol","type":"exact"},{"name":"downregulation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"},{"name":"inhibition of protein dislocation from ER","type":"narrow"},{"name":"inhibition of retrograde protein transport, ER to cytosol","type":"narrow"},{"name":"inhibition of retrograde protein transport, endoplasmic reticulum to cytosol","type":"narrow"},{"name":"negative regulation of protein dislocation from ER","type":"exact"},{"name":"negative regulation of protein retrotranslocation from ER","type":"exact"},{"name":"negative regulation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"}],"termid":"GO:1904153"}


id: PBO:0030857
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_calcium_level_during_cellular_response_to_salt_stress","termid":"PBO:0030857"}


id: PBO:0042411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 25A","termid":"PBO:0042411"}


id: PBO:0064315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase 4","termid":"PBO:0064315"}


id: MOD:01757
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Proteome Sciences TMT6plex-130 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-130 reporter+balance reagent acylated residue","termid":"MOD:01752"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-130 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01757"}


id: PBO:0050069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histocompatibility minor 13","termid":"PBO:0050069"}


id: PBO:0054685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2093","termid":"PBO:0054685"}


id: GO:0007318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained in, the oocyte pole plasm. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"part_of","term_name":"pole plasm assembly","termid":"GO:0007315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"pole plasm protein localization","secondary_identifiers":["GO:0048115"],"synonyms":[{"name":"establishment and maintenance of pole plasm protein localization","type":"exact"},{"name":"oocyte pole plasm protein localization","type":"exact"},{"name":"pole plasm protein localisation","type":"exact"}],"termid":"GO:0007318"}


id: PBO:0003215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual-specificity MAP kinase phosphatase Pmp1","termid":"PBO:0003215"}


id: PBO:0089406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S7","termid":"PBO:0089406"}


id: PBO:0089829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Nop4","termid":"PBO:0089829"}


id: GO:0071871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an epinephrine stimulus. Epinephrine is a catecholamine that has the formula C9H13NO3; it is secreted by the adrenal medulla to act as a hormone, and released by certain neurons to act as a neurotransmitter active in the central nervous system.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to epinephrine","synonyms":[{"name":"response to adrenaline stimulus","type":"exact"},{"name":"response to epinephrine stimulus","type":"exact"}],"termid":"GO:0071871"}


id: MONDO:0001193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chorioretinal scar (obsolete MONDO:0001193)","secondary_identifiers":["DOID:11086","ICD9:363.3","ICD9:363.30","SCTID:53854005"],"termid":"MONDO:0001193","xrefs":{"Monarch":{"xref_id":"0001193"}}}


id: PBO:0048136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMR1 autosomal homolog 2","termid":"PBO:0048136"}


id: GO:0072550
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: triferuloyl spermidine + NADPH + O2 = diferuloyl mono-(hydroxyferuloyl) spermidine + NADP+ + H2O.","definition_xrefs":["GOC:kad","PMID:19779199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tri-(feruloyl or hydroxyferuloyl) spermidine meta-hydroxylase activity","termid":"GO:0072532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"triferuloylspermidine meta-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-11262"],"synonyms":[{"name":"triferuloyl spermidine meta-hydroxylase activity","type":"exact"}],"termid":"GO:0072550"}


id: PBO:0077660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNFRSF10A divergent transcript","termid":"PBO:0077660"}


id: GO:0015024
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the 2-sulfate groups of the 2-O-sulfo-D-glucuronate residues of chondroitin sulfate, heparin and heparitin sulfate.","definition_xrefs":["EC:3.1.6.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"glucuronate-2-sulfatase activity","secondary_identifiers":["MetaCyc:3.1.6.18-RXN"],"synonyms":[{"name":"chondro-2-sulfatase activity","type":"related"},{"name":"glucuronate-2-sulphatase activity","type":"exact"},{"name":"glucurono-2-sulfatase activity","type":"related"},{"name":"polysaccharide-2-O-sulfo-D-glucuronate 2-sulfohydrolase activity","type":"related"}],"termid":"GO:0015024"}


id: PBO:0086886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transcription factor, contains Forkhead Associated domain; found associated with chromatin; target of SBF transcription factor; induced in response to DNA damaging agents and deletion of telomerase; PLM2 has a paralog, TOS4, that arose from the whole genome duplication","termid":"PBO:0086886"}


id: PR:P78750
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- utp18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.06","synonyms":[{"name":"Spom972h-utp18","type":"exact"},{"name":"U3 snoRNA-associated protein 18 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78750"}


id: GO:0102859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a (9Z,12Z)-octadecadienoyl-containing glycerolipid + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = (9Z,12Z,15Z)-octadecatrienoyl-containing glycerolipid + 2 Fe(III)-[cytochrome b5] + 2 H2O.","definition_xrefs":["RHEA:46404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acyl-lipid omega-3 desaturase (cytochrome b5) activity","secondary_identifiers":["EC:1.14.19.25","MetaCyc:RXN-16046"],"synonyms":[{"name":"1-18:1-2-18:2-phosphatidylcholine desaturase activity (SN2-18:3 forming)","type":"exact"}],"termid":"GO:0102859"}


id: MONDO:0012388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 11, autosomal dominant","secondary_identifiers":["MEDGEN:355874","MESH:C566490","OMIM:609994","UMLS:C1864941"],"synonyms":[{"name":"MYP11","type":"exact"},{"name":"myopia 11","type":"exact"},{"name":"myopia 11, autosomal dominant","type":"exact"}],"termid":"MONDO:0012388","xrefs":{"Monarch":{"xref_id":"0012388"}}}


id: FYPO:0007665
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, and contains one nucleus and one septum. The septum divides the cell into two compartments, one of which contains the nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable vegetative cell","termid":"FYPO:0001491"},{"relation_name":"is_a","term_name":"mononucleate monoseptate vegetative cell with anucleate compartment","termid":"FYPO:0007664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"viable mononucleate monoseptate vegetative cell with anucleate compartment","synonyms":[{"name":"displaced nucleus with septum","type":"related"},{"name":"viable mononucleate monoseptate cell during vegetative growth","type":"exact"},{"name":"viable mononucleate monoseptate vegetative cell","type":"exact"},{"name":"viable mononucleate monoseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable with septation in the absence of nuclear division","type":"related"},{"name":"viable with septation independent of mitosis","type":"related"},{"name":"viable with septation without nuclear division","type":"related"}],"termid":"FYPO:0007665"}


id: GO:0043056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Anterior movement of an organism, following the direction of the head of the animal.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"directional locomotion","termid":"GO:0033058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forward locomotion","termid":"GO:0043056"}


id: PBO:0039639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde oxidase 2, pseudogene","termid":"PBO:0039639"}


id: GO:0086072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of an AV node cell to an bundle of His cell via adhesion molecules that results in the cells being juxtaposed so that they can communicate.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterotypic cell-cell adhesion","termid":"GO:0034113"},{"relation_name":"is_a","term_name":"cardiac muscle cell-cardiac muscle cell adhesion","termid":"GO:0086042"},{"relation_name":"part_of","term_name":"AV node cell to bundle of His cell communication","termid":"GO:0086067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"AV node cell-bundle of His cell adhesion involved in cell communication","synonyms":[{"name":"atrioventricular node cell-bundle of His cell adhesion involved in cell communication","type":"exact"}],"termid":"GO:0086072"}


id: GO:0003032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which an oxygen stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"response to oxygen levels","termid":"GO:0070482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of oxygen","termid":"GO:0003032"}


id: RO:0002442
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship between two organisms living together in more or less intimate association in a relationship in which both organisms benefit from each other (GO).","direct_ancestors":[{"relation_name":"is_a","term_name":"symbiotically_interacts_with","termid":"RO:0002440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mutualistically_interacts_with","termid":"RO:0002442"}


id: PBO:0048322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 33","termid":"PBO:0048322"}


id: PATO:0001555
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The number of parts of a particular type that the bearer entity has. This is a relational quality, and thus holds between two entities: the bearer of the quality, and the type of parts.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has number of","secondary_identifiers":["OBO_REL:has_part"],"synonyms":[{"name":"cardinality","type":"related"},{"name":"extra or missing physical or functional parts","type":"exact"},{"name":"has or lacks parts of type","type":"exact"},{"name":"mereological quality","type":"exact"},{"name":"number","type":"related"},{"name":"number of","type":"exact"}],"termid":"PATO:0001555"}


id: PBO:0065132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parkin RBR E3 ubiquitin protein ligase","termid":"PBO:0065132"}


id: PBO:0081737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 668","termid":"PBO:0081737"}


id: SO:0000212
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding arginyl tRNA (SO:0000255).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine_tRNA_primary_transcript","synonyms":[{"name":"arginine tRNA primary transcript","type":"exact"}],"termid":"SO:0000212"}


id: PBO:0043464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 4 pseudogene 1","termid":"PBO:0043464"}


id: PBO:0074431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 31","termid":"PBO:0074431"}


id: GO:0019244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lactate from other compounds, including pyruvate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate metabolic process","termid":"GO:0006090"},{"relation_name":"is_a","term_name":"lactate biosynthetic process","termid":"GO:0019249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"lactate biosynthetic process from pyruvate","synonyms":[{"name":"lactate anabolism from pyruvate","type":"exact"},{"name":"lactate formation from pyruvate","type":"exact"},{"name":"lactate synthesis from pyruvate","type":"exact"},{"name":"pyruvate fermentation to lactate","type":"exact"}],"termid":"GO:0019244"}


id: PATO:0002462
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in an bearer by virtue of the bearer's consisting of collagen.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagenous","termid":"PATO:0002462"}


id: GO:1902514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of generation of calcium ion transmembrane transport via high voltage-gated calcium channel.","definition_xrefs":["PMID:1611048","GOC:dph","GOC:pg","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion transmembrane transport","termid":"GO:1903169"},{"relation_name":"regulates","term_name":"calcium ion transmembrane transport via high voltage-gated calcium channel","termid":"GO:0061577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of calcium ion transmembrane transport via high voltage-gated calcium channel","synonyms":[{"name":"regulation of generation of L-type calcium current","type":"related"}],"termid":"GO:1902514"}


id: GO:0071053
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha9-beta1 integrin complex bound to the transmembrane metallopeptidase ADAM2.","definition_xrefs":["PMID:11882657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alpha9-beta1 integrin-ADAM2 complex","synonyms":[{"name":"ITGA9-ITGB1-ADAM2 complex","type":"narrow"}],"termid":"GO:0071053"}


id: FYPO:0008065
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of ascospore formation is decreased after phosphate removal.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased sporulation frequency","termid":"FYPO:0000584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased sporulation frequency during phosphate starvation","termid":"FYPO:0008065"}


id: PBO:0042563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase like 5","termid":"PBO:0042563"}


id: GO:0016019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a peptidoglycan and transmitting the signal to initiate an innate immune response.","definition_xrefs":["PMID:14698226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor activity","termid":"GO:0038187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"peptidoglycan immune receptor activity","synonyms":[{"name":"peptidoglycan receptor activity","type":"broad"},{"name":"peptidoglycan recognition activity","type":"narrow"}],"termid":"GO:0016019"}


id: GO:1903451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of G1 to G0 transition.","definition_xrefs":["GOC:TermGenie","PMID:24088570","GOC:di","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of G1 to G0 transition","termid":"GO:1903450"},{"relation_name":"negatively_regulates","term_name":"G1 to G0 transition","termid":"GO:0070314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of G1 to G0 transition","synonyms":[{"name":"down regulation of G1 to G0 transition","type":"exact"},{"name":"down regulation of G1/G0 transition","type":"exact"},{"name":"down regulation of cell cycle quiescence","type":"related"},{"name":"down regulation of establishment of cell quiescence","type":"exact"},{"name":"down regulation of stationary phase","type":"related"},{"name":"down-regulation of G1 to G0 transition","type":"exact"},{"name":"down-regulation of G1/G0 transition","type":"exact"},{"name":"down-regulation of cell cycle quiescence","type":"related"},{"name":"down-regulation of establishment of cell quiescence","type":"exact"},{"name":"down-regulation of stationary phase","type":"related"},{"name":"downregulation of G1 to G0 transition","type":"exact"},{"name":"downregulation of G1/G0 transition","type":"exact"},{"name":"downregulation of cell cycle quiescence","type":"related"},{"name":"downregulation of establishment of cell quiescence","type":"exact"},{"name":"downregulation of stationary phase","type":"related"},{"name":"inhibition of G1 to G0 transition","type":"narrow"},{"name":"inhibition of G1/G0 transition","type":"narrow"},{"name":"inhibition of cell cycle quiescence","type":"related"},{"name":"inhibition of establishment of cell quiescence","type":"narrow"},{"name":"inhibition of stationary phase","type":"related"},{"name":"negative regulation of G1/G0 transition","type":"exact"},{"name":"negative regulation of cell cycle quiescence","type":"related"},{"name":"negative regulation of establishment of cell quiescence","type":"exact"},{"name":"negative regulation of stationary phase","type":"related"}],"termid":"GO:1903451"}


id: PBO:0029200
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_clotrimazole","termid":"PBO:0029200"}


id: PBO:0089599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomethylpyrimidine kinase Thi20","termid":"PBO:0089599"}


id: PBO:0054831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2244","termid":"PBO:0054831"}


id: PBO:0049737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit alpha pseudogene 1","termid":"PBO:0049737"}


id: PBO:0109835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTT co-chaperone complex subunit Tti2","termid":"PBO:0109835"}


id: PBO:0082128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Actin; structural protein involved in cell polarization, endocytosis, and other cytoskeletal functions; monomeric actin in the nucleus plays a role in INO80 chromatin remodeling","termid":"PBO:0082128"}


id: PBO:0028784
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mRNA-derived_small_RNA_level","termid":"PBO:0028784"}


id: FYPO:0005896
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is decreased during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to chromatin during mitotic G1 phase","synonyms":[{"name":"decreased protein localisation to chromatin during mitotic G1 phase","type":"exact"},{"name":"decreased protein localization to chromatin during G1 phase during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin during G1 phase of mitotic cell cycle","type":"related"},{"name":"reduced protein localization to chromatin during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0005896"}


id: PBO:0082121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyltransferase; required for establishment of sister chromatid cohesion; acetylates Mps3p to regulate nuclear organization; modifies Smc3p at replication forks and Mcd1p in response to dsDNA breaks; phosphorylated by three kinases (Cdc28p, Cdc7p, Mck1p) to generate pair of phosphates spaced precisely for recognition by ubiquitin ligase SCF-Cdc4; mutations in human homolog ESCO2 cause Roberts syndrome; relative distribution to nucleus increases upon DNA replication stress","termid":"PBO:0082121"}


id: PBO:0053892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1176","termid":"PBO:0053892"}


id: GO:0048490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of synaptic vesicle along axonal microtubules from the cell body to the presynapse.","definition_xrefs":["GOC:lmg","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterograde axonal transport","termid":"GO:0008089"},{"relation_name":"is_a","term_name":"synaptic vesicle transport along microtubule","termid":"GO:0099517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"anterograde synaptic vesicle transport","synonyms":[{"name":"anterograde axonal transport of synaptic vesicle","type":"exact"}],"termid":"GO:0048490"}


id: PBO:0052456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 7","termid":"PBO:0052456"}


id: PBO:0075609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speckle type BTB/POZ protein","termid":"PBO:0075609"}


id: GO:0046620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of growth of an organ of an organism.","definition_xrefs":["GOC:bf","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"organ growth","termid":"GO:0035265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of organ growth","termid":"GO:0046620"}


id: PBO:0015237
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RAM1","termid":"PBO:0015237"}


id: _global:guides
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guides","termid":"_global:guides"}


id: GO:0048779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of erythrophore differentiation.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of erythrophore differentiation","termid":"GO:0048778"},{"relation_name":"is_a","term_name":"negative regulation of pigment cell differentiation","termid":"GO:0050941"},{"relation_name":"negatively_regulates","term_name":"erythrophore differentiation","termid":"GO:0048773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of erythrophore differentiation","synonyms":[{"name":"down regulation of erythrophore differentiation","type":"exact"},{"name":"down-regulation of erythrophore differentiation","type":"exact"},{"name":"downregulation of erythrophore differentiation","type":"exact"},{"name":"inhibition of erythrophore differentiation","type":"narrow"}],"termid":"GO:0048779"}


id: MONDO:0004992
data:
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id: MONDO:0010985
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id: FYPO:0004501
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id: PBO:0045964
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id: PBO:0082596
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id: PBO:0077263
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id: PBO:0062691
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id: PBO:0048907
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id: GO:2001283
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id: GO:0016853
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id: GO:0019521
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id: PBO:0111874
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id: PBO:0082457
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id: GO:0033686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of luteinizing hormone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gonadotropin secretion","termid":"GO:0032278"},{"relation_name":"is_a","term_name":"regulation of luteinizing hormone secretion","termid":"GO:0033684"},{"relation_name":"positively_regulates","term_name":"luteinizing hormone secretion","termid":"GO:0032275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of luteinizing hormone secretion","synonyms":[{"name":"activation of luteinizing hormone secretion","type":"narrow"},{"name":"stimulation of luteinizing hormone secretion","type":"narrow"},{"name":"up regulation of luteinizing hormone secretion","type":"exact"},{"name":"up-regulation of luteinizing hormone secretion","type":"exact"},{"name":"upregulation of luteinizing hormone secretion","type":"exact"}],"termid":"GO:0033686"}


id: GO:1904638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a resveratrol stimulus.","definition_xrefs":["GOC:TermGenie","PMID:23555824","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stilbenoid","termid":"GO:0035634"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to resveratrol","termid":"GO:1904638"}


id: GO:0052113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The responsive adjustment of an organism to the osmotic conditions in or around its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete adaptation to host osmotic environment (obsolete GO:0052113)","synonyms":[{"name":"adaptation to host osmotic environment","type":"exact"},{"name":"osmotic tolerance to host environment","type":"exact"}],"termid":"GO:0052113"}


id: GO:0032629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-25 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-25 production","secondary_identifiers":["GO:0045525","GO:0072623"],"synonyms":[{"name":"IL-25 production","type":"exact"},{"name":"IL-25 secretion","type":"narrow"},{"name":"IL17E secretion","type":"narrow"},{"name":"interleukin-25 anabolism","type":"narrow"},{"name":"interleukin-25 biosynthesis","type":"narrow"},{"name":"interleukin-25 biosynthetic process","type":"narrow"},{"name":"interleukin-25 formation","type":"narrow"},{"name":"interleukin-25 secretion","type":"narrow"},{"name":"interleukin-25 synthesis","type":"narrow"}],"termid":"GO:0032629"}


id: MONDO:0002369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or borderline cystic epithelial neoplasm arising from the glandular epithelium. The epithelial cells line the cystic spaces which contain serous or mucinous fluid. Representative examples include ovarian and pancreatic cystadenomas.","definition_xrefs":["NCIT:C2972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"cystic neoplasm","termid":"MONDO:0021077"},{"relation_name":"is_a","term_name":"glandular cell neoplasm","termid":"MONDO:0024276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystadenoma","secondary_identifiers":["DOID:2634","MEDGEN:8221","ICDO:8440/0","MESH:D003537","UMLS:C0010633"],"synonyms":[{"name":"cystadenoma","type":"exact"},{"name":"cystadenoma (morphologic abnormality)","type":"exact"},{"name":"cystadenoma, benign","type":"exact"},{"name":"cystoma","type":"exact"}],"termid":"MONDO:0002369","xrefs":{"Monarch":{"xref_id":"0002369"}}}


id: PBO:0041219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1GALT1 specific chaperone 1","termid":"PBO:0041219"}


id: PBO:0034620
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_Cutin-1","termid":"PBO:0034620"}


id: PBO:0048110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-L-fucosidase 2","termid":"PBO:0048110"}


id: PBO:0050678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 5","termid":"PBO:0050678"}


id: GO:0075018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of symbiont appressorium formation.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of appressorium formation","termid":"GO:0075017"},{"relation_name":"positively_regulates","term_name":"appressorium formation","termid":"GO:0075016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of appressorium formation","synonyms":[{"name":"positive regulation of appressorium formation on or near host","type":"related"}],"termid":"GO:0075018"}


id: MONDO:0958000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocytopenia 11 with multiple congenital anomalies and dysmorphic facies","secondary_identifiers":["OMIM:620654","MEDGEN:1846947","UMLS:C5882734"],"termid":"MONDO:0958000","xrefs":{"Monarch":{"xref_id":"0958000"}}}


id: MONDO:0010293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"},{"relation_name":"is_a","term_name":"hypohidrotic ectodermal dysplasia","termid":"MONDO:0016535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"ectodermal dysplasia and immune deficiency","secondary_identifiers":["MEDGEN:375786","NANDO:1200360","OMIMPS:300291","NCIT:C118844","Orphanet:98813","UMLS:C1846006","NANDO:2200761","MESH:C536181","GARD:9936","SCTID:703525006","DOID:0081077"],"synonyms":[{"name":"EDA-ID","type":"exact"},{"name":"HED-ID","type":"exact"},{"name":"Xhm-Ed","type":"related"},{"name":"anhidrotic ectodermal dysplasia with immune deficiency","type":"exact"},{"name":"anhidrotic ectodermal dysplasia with immunodeficiency","type":"exact"},{"name":"ectodermal dysplasia, anhidrotic, with immune deficiency","type":"related"},{"name":"ectodermal dysplasia, hypohidrotic, with immune deficiency","type":"related"},{"name":"hyper-IgM immunodeficiency, X-linked, with hypohidrotic ectodermal dysplasia","type":"related"},{"name":"hypohidrotic ectodermal dysplasia with immune deficiency","type":"exact"},{"name":"hypohidrotic ectodermal dysplasia with immunodeficiency","type":"exact"}],"termid":"MONDO:0010293","xrefs":{"Monarch":{"xref_id":"0010293"}}}


id: GO:1901960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving isobutanol.","definition_xrefs":["PMID:22224870","GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"isobutanol metabolic process","synonyms":[{"name":"isobutanol metabolism","type":"exact"}],"termid":"GO:1901960"}


id: PBO:0044807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 105B","termid":"PBO:0044807"}


id: GO:0160108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process whose specific outcome is the progression of a gross anatomical part of an animal from an initial immature state, to a later, more mature state.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"animal gross anatomical part developmental process","synonyms":[{"name":"animal development","type":"related"}],"termid":"GO:0160108"}


id: GO:0019338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pentachlorophenol, a chlorinated insecticide and fungicide used primarily to protect timber from fungal rot and wood boring insects. Pentachlorophenol is significantly toxic to mammals, plants, and many microorganisms.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentachlorophenol metabolic process","termid":"GO:0018961"},{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pentachlorophenol catabolic process","secondary_identifiers":["MetaCyc:PCPDEG-PWY"],"synonyms":[{"name":"pentachlorophenol breakdown","type":"exact"},{"name":"pentachlorophenol catabolism","type":"exact"},{"name":"pentachlorophenol degradation","type":"exact"}],"termid":"GO:0019338"}


id: PBO:0085364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoribosylanthranilate isomerase; catalyzes the third step in tryptophan biosynthesis; in 2004, the sequence of TRP1 from strain S228C was updated by changing the previously annotated internal STOP (TAA) to serine (TCA); enhances vegetative growth at low and high temperatures when used as an auxotrophic marker in strains such as W303","termid":"PBO:0085364"}


id: RO:0002400
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p has direct input c iff c is a participant in p, c is present at the start of p, and the state of c is modified during p.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_input","termid":"RO:0002233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_direct_input","termid":"RO:0002400"}


id: PBO:0049061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 75","termid":"PBO:0049061"}


id: RO:0002205
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has gene product y if and only if x is a gene (SO:0000704) that participates in some gene expression process (GO:0010467) where the output of that process is either y or something that is ribosomally translated from y","direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_related_to","termid":"RO:0002330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_gene_product","termid":"RO:0002205"}


id: PR:C6Y4C0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC222.18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4C0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor C222.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.18","synonyms":[{"name":"Spom972h-SPAC222.18","type":"exact"}],"termid":"PR:C6Y4C0"}


id: PBO:0087463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a kinetochore-microtubule binding complex; complex bridges centromeric heterochromatin and kinetochore MAPs and motors; required for sister chromatid bi-orientation and kinetochore binding of SAC components; complex also includes Spc105p; modified by sumoylation","termid":"PBO:0087463"}


id: MONDO:0005556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glomerulonephritis in the context of systemic lupus erythematosus.","definition_xrefs":["NCIT:C34789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulonephritis","termid":"MONDO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"lupus nephritis","secondary_identifiers":["icd11.foundation:1815692673","MEDGEN:6147","UMLS:C0024143","EFO:0005761","MESH:D008181","GARD:10747","SCTID:68815009","DOID:0080162","NANDO:2200128"],"synonyms":[{"name":"Glomerulonephritides, lupus","type":"related"},{"name":"Nephritides, lupus","type":"related"},{"name":"SLE nephritis","type":"exact"},{"name":"glomerulonephritis, lupus","type":"related"},{"name":"lupus Glomerulonephritides","type":"related"},{"name":"lupus Nephritides","type":"related"},{"name":"lupus glomerulonephritis","type":"exact"},{"name":"lupus nephritis","type":"exact"},{"name":"nephritis, lupus","type":"related"}],"termid":"MONDO:0005556","xrefs":{"Monarch":{"xref_id":"0005556"}}}


id: PBO:0109126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basonuclin zinc finger protein 2","termid":"PBO:0109126"}


id: PBO:0047884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(5)(p14)","termid":"PBO:0047884"}


id: PBO:0068549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 155 pseudogene","termid":"PBO:0068549"}


id: PBO:0005593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT organizer Mto1","termid":"PBO:0005593"}


id: GO:1902763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of embryonic skeletal joint development.","definition_xrefs":["GO_REF:0000058","PMID:16575901","GOC:mr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of embryonic skeletal joint development","termid":"GO:1902762"},{"relation_name":"negatively_regulates","term_name":"embryonic skeletal joint development","termid":"GO:0072498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of embryonic skeletal joint development","synonyms":[{"name":"down regulation of embryonic skeletal joint development","type":"exact"},{"name":"down-regulation of embryonic skeletal joint development","type":"exact"},{"name":"downregulation of embryonic skeletal joint development","type":"exact"},{"name":"inhibition of embryonic skeletal joint development","type":"narrow"}],"termid":"GO:1902763"}


id: PBO:0005907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid permease family","termid":"PBO:0005907"}


id: PBO:0109828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperone, AAA family ATPase Rvb1","termid":"PBO:0109828"}


